cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 3 of Transcriptome analysis of parallel-evolved Escherichia coli strains under ethanol stress
Creators: name: Horinouchi, Takaaki
name: Kuniyasu Tamaoka
name: Furusawa, Chikara
name: Naoaki Ono
name: Suzuki, Shingo
name: Hirasawa, Takashi
name: Yomo, Tetsuya
name: Shimizu, Hiroshi
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 3: Supplementary Figure S2 - Expression levels of genes regulated by NrdR and OxyR. The log10-transformed expression levels of genes regulated by (a) NrdR and (b) OxyR in strain P (0% or 5% ethanol) and tolerant strains A-F (5%) are presented. The expression levels are sorted in the decreasing order of the expression levels in strain P without ethanol stress. The black dot lines represent the expression levels in strain P without ethanol stress for the reference. A list of genes regulated by NrdR and OxyR in the same order is presented in Additional File 4. (PDF 39 KB)
SB XIV 11961
Creators: name: Papathomas, Amphilochios
Publisher: name: TYCHE – Beiträge zur Alten Geschichte, Papyrologie und Epigraphik
Year: 2022

description: Der Aufsatz enthält Korrekturvorschläge und eine Neuedition des spätantiken Geschäftsbriefs SB XIV 11961, der zu den Beständen der Papyrussammlung der Österreichischen Nationalbibliothek gehört und bis heute immer noch fälschlicherweise als (semi)literarisch galt (LDAB 6372; van Haelst 1183).
description: TYCHE – Beiträge zur Alten Geschichte, Papyrologie und Epigraphik, Bd. 34 (2019)
On the signless Laplacian spectral radius of $K_{s,t}$-minor free graphs
Creators: name: Chen, Ming-Zhu
name: Zhang, Xiao-Dong
Publisher: name: arXiv
Year: 2019
Subjects: subject: Combinatorics (math.CO)
subject: FOS: Mathematics
subject: 05C50

description: In this paper, we prove that if $G$ is a $K_{2,t}$-minor free graph of order $n\geq t^2+4t+1$ with $t\geq 3$, the signless Laplacian spectral radius $q(G)\leq \frac{1}{2}(n+2t-2+\sqrt{(n-2t+2)^2+8t-8}\ )$ with equality if and only if $n\equiv 1~(\mathrm{mod}~t)$ and $G=F_{2,t}(n)$, where $F_{s,t}(n):=K_{s-1}\vee (p\cdot K_t\cup K_r)$ for $n-s+1=pt+r$ and $0\leq r
description: 11 pages
Reproducible Archaeology: Survey Results
Creators: name: Clarke, Alison
name: Karoune, Emma
Publisher: name: Zenodo
Year: 2022
Subjects: reproducibility
archaeology

description: This data is the results of two similar polls. The first set of results, "Reproducible Archaeology: Responses from Durham University Archaeologists" holds data from a live poll participated in during the workshop on 'Reproducible research in Archaeology' at Durham University on 15th October 2021. (See https://doi.org/10.5281/zenodo.5615534 for a recording of the workshop.) The second poll was advertised on Twitter in November 2021, aiming to gather answers to the same questions but in a modified format for a survey rather than a live poll. The poll and reports were created using Slido: the PDF is an automatically generated report; the Excel Spreadsheet gives all poll answers. The use of Slido was funded by the Software Sustainability Institute as part of their Fellowship scheme.
Clustering aspects and the shell model
Creators: name: Arima, Akito
Publisher: name: arXiv
Year: 2004
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: In this talk I shall discuss the clustering aspect and the shell model. I shall first discuss the $α$-cluster aspects based on the shell model calculations. Then I shall discuss the spin zero ground state dominance in the presence of random interactions and a new type of cluster structure for fermions in a single-$j$ shell in the presence of only pairing interaction with the largest multiplicity.
description: 10 pages and 3 figures. International symposium in Nara, to appear in Nuclear Physics A
Eudesmus nicaraguensis Breuning 1958
Creators: name: Nearns, Eugenio H.
name: Tavakilian, Gérard L.
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Eudesmus
Eudesmus nicaraguensis

description: Eudesmus nicaraguensis Breuning, 1958a: 35
Holotype, male
 Type locality. Nicaragua, Chontales
 Remarks. Breuning (1958) indicated that the holotype specimen was in the René Oberthür collection at the MNHN, but the specimen is not found and is presumed to be lost.
description: Published as part of Nearns, Eugenio H. & Tavakilian, Gérard L., 2015, Onciderini Thomson, 1860 (Coleoptera: Cerambycidae: Lamiinae) types of the Muséum national d'Histoire naturelle (MNHN), with a brief history of the Coleoptera collection, pp. 1-47 in Insecta Mundi 2015 (459) on page 37, DOI: 10.5281/zenodo.5183066
Invariance principle for wave propagation inside inhomogeneously disordered materials
Creators: name: Huang, Yiming
name: Tian, Chushun
name: Gopar, Victor A.
name: Fang, Ping
name: Genack, Azriel Z.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Disorder is more the rule than the exception in natural and synthetic materials. Nonetheless, wave propagation within inhomogeneously disordered materials has received scant attention. We combine microwave experiments and theory to find the spatial variation of generic wave propagation quantities in inhomogeneously disordered materials. We demonstrate that wave statistics within samples of any dimension are independent of the detailed structure of a material and depend only on the net strengths of distributed scattering and reflection between the observation point and each of the boundaries.
description: main: 6 pages, 4 figures; Supplemental materials: 13 pages, 4 figures
The integration of systems of linear PDEs using conservation laws of syzygies
Creators: name: Wolf, Thomas
Publisher: name: arXiv
Year: 2003
Subjects: subject: Symbolic Computation (cs.SC)
subject: Analysis of PDEs (math.AP)
subject: FOS: Computer and information sciences
subject: FOS: Mathematics
subject: I.1.2

description: A new integration technique is presented for systems of linear partial differential equations (PDEs) for which syzygies can be formulated that obey conservation laws. These syzygies come for free as a by-product of the differential Groebner Basis computation. Compared with the more obvious way of integrating a single equation and substituting the result in other equations the new technique integrates more than one equation at once and therefore introduces temporarily fewer new functions of integration that in addition depend on fewer variables. Especially for high order PDE systems in many variables the conventional integration technique may lead to an explosion of the number of functions of integration which is avoided with the new method. A further benefit is that redundant free functions in the solution are either prevented or that their number is at least reduced.
description: 26 pages
Additional file 5 of Transcriptome analysis of parallel-evolved Escherichia coli strains under ethanol stress
Creators: name: Horinouchi, Takaaki
name: Kuniyasu Tamaoka
name: Furusawa, Chikara
name: Naoaki Ono
name: Suzuki, Shingo
name: Hirasawa, Takashi
name: Yomo, Tetsuya
name: Shimizu, Hiroshi
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Authors’ original file for figure 1
MOESM3 of The Medicago truncatula nodule identity gene MtNOOT1 is required for coordinated apical-basal development of the root
Creators: name: Defeng Shen
name: Kulikova, Olga
name: Guhl, Kerstin
name: Franssen, Henk
name: Kohlen, Wouter
name: Bisseling, Ton
name: Geurts, René
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Ecology
subject: Developmental Biology
subject: Plant Biology

description: Additional file 3: Figure S3. The Mtnoot1 NF2717 mutant allele shows a similar phenotype as the Mtnoot1 tnk507 allele. a Root length of the medicago Mtnoot1 mutant (NF2717) is markedly longer at 4 DAG and 6 DAG when compared to primary roots of wild-type medicago seedlings (WT). b The cross-sectional area is significantly reduced in the medicago Mtnoot1 mutant (NF2717) at zone 3 and zone 4. The data represent means + SD of two independent experiments, each experiment contains 15–20 roots. Student t-test was performed to assess significant differences (****: P
Additional file 6 of Transcriptome analysis of parallel-evolved Escherichia coli strains under ethanol stress
Creators: name: Horinouchi, Takaaki
name: Kuniyasu Tamaoka
name: Furusawa, Chikara
name: Naoaki Ono
name: Suzuki, Shingo
name: Hirasawa, Takashi
name: Yomo, Tetsuya
name: Shimizu, Hiroshi
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Authors’ original file for figure 2
Optimal grouping of arbitrary diagrammatic expansions via analytic pole structure
Creators: name: Taheridehkordi, Amir
name: Curnoe, S. H.
name: LeBlanc, J. P. F.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We present a general method to optimize the evaluation of Feynman diagrammatic expansions, which requires the automated symbolic assignment of momentum/energy conserving variables to each diagram. With this symbolic representation, we utilize the pole structure of each diagram to automatically sort the Feynman diagrams into groups that are likely to contain nearly equal or nearly cancelling diagrams, and we show that for some systems this cancellation is exact. This allows for a potentially massive cancellation during the numerical integration of internal momenta variables, leading to an optimal suppression of the `sign problem' and hence reducing the computational cost. Although we define these groups using a frequency space representation, the equality or cancellation of diagrams within the group remains valid in other representations such as imaginary time used in standard diagrammatic Monte Carlo. As an application of the approach we apply this method, combined with algorithmic Matsubara integration (AMI) [Phys. Rev. B 99, 035120 (2019)] and Monte Carlo methods, to the Hubbard model self-energy expansion on a 2D square lattice up to sixth order which we evaluate and compare with existing benchmarks.
Der Gebrauch von Gnomen in den griechischen privaten Papyrusbriefen der römischen Kaiserzeit bis zum Ende des 4. Jh. n. Chr.
Creators: name: Papathomas, Amphilochios
name: Tsitsianopoulou, Eleni
Publisher: name: TYCHE – Beiträge zur Alten Geschichte, Papyrologie und Epigraphik
Year: 2022

description: The present study focuses on locating and analyzing the use of gnomes occurring in private Greek papyrus letters of the Roman Imperial period from 31 BC to the end of the fourth century AD. Gnomes are very frequent in consolatory letters of the period in question, while also being used in various other private letters. Gnomes prove an important source of information on the views of the people of the Roman period on issues of religious, philosophical and social interest. The paper offers observations on the motifs encountered in the gnomes, the formalistic character of the latter, their positioning within the letters, their part in the rhetorical construction of the letters, and their temporal distribution.
description: TYCHE – Beiträge zur Alten Geschichte, Papyrologie und Epigraphik, Bd. 34 (2019)
Hypsioma omoplata Lacordaire 1872
Creators: name: Nearns, Eugenio H.
name: Tavakilian, Gérard L.
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Hypsioma
Hypsioma omoplata

description: Hypsioma omoplata Lacordaire, 1872: 676
Syntype, female
 Type locality. Brazil
 Current name. Lesbates acromii (Dalman, 1823)
 Remarks. Lacordaire (1872) did not indicate the number of specimens studied in his description of this species. An illustration of a male specimen of this species was provided by Lacordaire (1876, Pl. 104, Fig. 5). A single female specimen was found in the MNHN collection which matches the figure provided by Lacordaire, except for the length of the antennae and the size of the antennal tubercles. We consider this specimen a syntype.
description: Published as part of Nearns, Eugenio H. & Tavakilian, Gérard L., 2015, Onciderini Thomson, 1860 (Coleoptera: Cerambycidae: Lamiinae) types of the Muséum national d'Histoire naturelle (MNHN), with a brief history of the Coleoptera collection, pp. 1-47 in Insecta Mundi 2015 (459) on page 37, DOI: 10.5281/zenodo.5183066
Dust charging in dynamic ion wakes
Creators: name: Matthews, Lorin Swint
name: Sanford, Dustin L.
name: Kostadinova, Evdokiya
name: Ashrafi, Khandaker Sharmin
name: Guay, Evelyn
name: Hyde, Truell W.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Plasma Physics (physics.plasm-ph)
subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences

description: Micron-sized dust grains have been successfully employed as non-perturbative probes to measure variations in plasma conditions on small spatial scales, such as those found in plasma sheaths. The dynamics of the grains can be used to map the forces due to electric fields present in the sheath, but the particle charge and electric field are difficult to measure independently. The problem is further complicated by the ion wake field which develops downstream of the dust grains in a flowing plasma. Within a sheath, ions are accelerated towards the charged boundary, and this ion flow creates a positively-charged spatial region downstream of the dust grain, called the ion wake. The ion wake in turn modifies the interaction potential between the charged grains. Here we use a molecular dynamics simulation of ion flow past dust grains to investigate the interaction between the charged dust particles and ions. The charging and dynamics of the grains are coupled self-consistently and derived from the ion-dust interactions, allowing for detailed analysis of the wakefield-mediated interaction as the structural configuration of the dust grains changes. The decharging of a dust grain as it moves through the wake of an upstream particle and the attractive ion wakefield force are mapped for a range of ion flow speeds.
description: 23 pages
MOESM2 of The Medicago truncatula nodule identity gene MtNOOT1 is required for coordinated apical-basal development of the root
Creators: name: Defeng Shen
name: Kulikova, Olga
name: Guhl, Kerstin
name: Franssen, Henk
name: Kohlen, Wouter
name: Bisseling, Ton
name: RenÃ© Geurts
Publisher: name: figshare
Year: 2019
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Plant Biology

description: Additional file 2: Figure S2. The primary root Mtnoot1 tnk507 mutant is longer than wild-type. Representative seedlings at 6 DAG are presented. (DOCX)
Hypsioma prodigiosa Thomson 1868
Creators: name: Nearns, Eugenio H.
name: Tavakilian, Gérard L.
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Hypsioma
Hypsioma prodigiosa

description: Hypsioma prodigiosa Thomson, 1868a: 45 (Fig. 140a, b)
Holotype
 Type locality. Brazil
 Current name. Typhlocerus prodigiosus (Thomson, 1868)
 Remarks. No specimens of this species are found in MNHN collection and the holotype is presumed to be lost. A neotype specimen deposited at the USNM has been designated by Lingafelter et al. (2014).
description: Published as part of Nearns, Eugenio H. & Tavakilian, Gérard L., 2015, Onciderini Thomson, 1860 (Coleoptera: Cerambycidae: Lamiinae) types of the Muséum national d'Histoire naturelle (MNHN), with a brief history of the Coleoptera collection, pp. 1-47 in Insecta Mundi 2015 (459) on page 37, DOI: 10.5281/zenodo.5183066
Continuous-time quantum walk spatial search on the Bollobás scale-free network
Creators: name: Osada, Tomo
name: Coutinho, Bruno
name: Omar, Yasser
name: Sanaka, Kaoru
name: Munro, William J.
name: Nemoto, Kae
Publisher: name: arXiv
Year: 2019
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The scale-free property emerges in various real-world networks and is an essential property which characterizes the dynamics or features of such networks. In this work we investigate the effect of this scale-free property on a quantum information processing task of finding a marked node in the network, known as the quantum spatial search. We analyze the quantum spatial search algorithm using continuous-time quantum walk on the Bollobás network, and evaluate the time $T$ to localize the quantum walker on the marked node starting from an unbiased initial state. Our main finding is that $T$ is determined by the global structure around the marked node, while some local information of the marked node such as degree does not identify $T$. We discuss this by examining the correlation between $T$ and some centrality measures of the network, and show that the closeness centrality of the marked node is highly correlated with $T$. We also characterize the distribution of $T$ by marking different nodes in the network, which displays a multi-mode lognormal distribution. Especially on the Bollobás network, $T$ is magnitude of orders shorter depending whether the marked node is adjacent to the largest degree hub node or not. However, as $T$ depends on the property of the marked node, one requires some amount of prior knowledge about such property of the marked node in order to identify the optimal time to measure the quantum walker and achieve fast search. These results indicate that the existence of the hub node in the scale-free network is playing a crucial role on the quantum spatial search.
description: 10 pages, 6 figures
Additional file 7 of Transcriptome analysis of parallel-evolved Escherichia coli strains under ethanol stress
Creators: name: Horinouchi, Takaaki
name: Kuniyasu Tamaoka
name: Furusawa, Chikara
name: Naoaki Ono
name: Suzuki, Shingo
name: Hirasawa, Takashi
name: Yomo, Tetsuya
name: Shimizu, Hiroshi
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Authors’ original file for figure 3
Orientifolds of type IIA strings on Calabi-Yau manifolds
Creators: name: Govindarajan, Suresh
name: Majumder, Jaydeep
Publisher: name: arXiv
Year: 2003
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We identify type IIA orientifolds that are dual to M-theory compactifications on manifolds with G_2-holonomy. We then discuss the construction of crosscap states in Gepner models. (Based on a talk presented by S.G. at PASCOS 2003 held at the Tata Institute of Fundamental Research, Mumbai during Jan. 3-8, 2003.)
description: 3 pages, RevTeX, PASCOS '03 talk
Das Stadtgesetzfragment von Vindobona
Creators: name: Rafetseder, Niklas
Publisher: name: TYCHE – Beiträge zur Alten Geschichte, Papyrologie und Epigraphik
Year: 2022

description: Ein im Jahre 1913 bei Bauarbeiten im Bereich des ehemaligen Legionslagers Vindobona gefundenes Fragment einer römischen Bronzetafel mit rechtlichem Inhalt konnte nun durch Abgleich mit dem Text der in Spanien gefundenen flavischen Munizipalgesetze als römisches Stadtgesetz identifiziert werden. Der Artikel beschäftigt sich einerseits mit möglichen Lesungen und Rekonstruktionsvorschlägen als auch mit dem municipium Vindobonense, dessen Existenz nun als einigermaßen gesichert gelten darf.
description: TYCHE – Beiträge zur Alten Geschichte, Papyrologie und Epigraphik, Bd. 34 (2019)
Co-assembly of Janus nanoparticles in block copolymer systems
Creators: name: Diaz, Javier
name: Pinna, Marco
name: Zvelindovsky, Andrei
name: Pagonabarraga, Ignacio
Publisher: name: arXiv
Year: 2019
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: Block copolymer are ideal matrices to control the localisation of colloids. Furthermore, anisotropic nanoparticles such as Janus nanoparticles possess an additional orientational degree of freedom that can play a crucial role in the formation of highly ordered materials made of block copolymers. This work presents a mesoscopic simulation method to assert the co-assembly of Janus nanoparticles in a block copolymer mixture, finding numerous instances of aggregation and formation of ordered configurations which can be related to dispersions of pure Janus colloids. Comparison with chemically homogeneous neutral nanoparticles determines that Janus nanoparticles are less prone to induce bridging along lamellar domains, thus being a less destructive way to segregate nanoparticles at interfaces. The combination of asymmetric block copolymer and asymmetric Janus nanoparticles can result in assembly of colloids in an even number of layers within one of the block domains.
description: Full Paper
Jamesia papulenta Thomson 1868
Creators: name: Nearns, Eugenio H.
name: Tavakilian, Gérard L.
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Cornales
Hydrangeaceae
Jamesia
Jamesia papulenta

description: Jamesia papulenta Thomson, 1868a: 43
Syntypes
 Type locality. Colombia
 Remarks. This species was described from a series of syntype specimens. The syntype specimens are not found in MNHN collection and are presumed to be lost.
description: Published as part of Nearns, Eugenio H. & Tavakilian, Gérard L., 2015, Onciderini Thomson, 1860 (Coleoptera: Cerambycidae: Lamiinae) types of the Muséum national d'Histoire naturelle (MNHN), with a brief history of the Coleoptera collection, pp. 1-47 in Insecta Mundi 2015 (459) on page 37, DOI: 10.5281/zenodo.5183066
Confinement/Deconfinement Transition of Large N Gauge Theories with N_f Fundamentals: N_f/N Finite
Creators: name: Schnitzer, Howard J.
Publisher: name: arXiv
Year: 2004
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We consider large N zero-coupling d-dimensional U(N) gauge theories, with N_f matter fields in the fundamental representation on a compact spatial manifold S^{d-1} x time, with N_f/N finite. The Gauss' law constraint induces interactions among the fields, in spite of the zero-coupling. This class of theories undergo a 3rd order deconfinement phase transition at a temperature T_c proportional to the inverse length scale of the compact manifold. The low-temperature phase has a free-energy of {\cal O} (N^2_f), interpreted as that of a gas of (color singlet) mesons and glueballs. The high-temperature (deconfinement) phase has a free energy of order N^2 f (N_f/N, T), which is interpreted as that of a gas of gluons and of fundamental and anti-fundamental matter states. This suggests the existence of a dual string theory, and a transition to a black hole at high temperature.
description: 16 pages. Typos corrected
Additional file 8 of Transcriptome analysis of parallel-evolved Escherichia coli strains under ethanol stress
Creators: name: Horinouchi, Takaaki
name: Kuniyasu Tamaoka
name: Furusawa, Chikara
name: Naoaki Ono
name: Suzuki, Shingo
name: Hirasawa, Takashi
name: Yomo, Tetsuya
name: Shimizu, Hiroshi
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Authors’ original file for figure 4
MOESM11 of The Medicago truncatula nodule identity gene MtNOOT1 is required for coordinated apical-basal development of the root
Creators: name: Defeng Shen
name: Kulikova, Olga
name: Guhl, Kerstin
name: Franssen, Henk
name: Kohlen, Wouter
name: Bisseling, Ton
name: RenÃ© Geurts
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Additional file 11: Table S1. qRT-PCR primers used in this study. (DOCX)
Initial and final state temperatures of antiproton emission sources in high energy collisions
Creators: name: Wang, Qi
name: Liu, Fu-Hu
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Experiment (hep-ex)
subject: Nuclear Experiment (nucl-ex)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: The momentum or transverse momentum spectra of antiprotons produced at mid-rapidity in proton-helium ($p$+He), gold-gold (Au+Au), deuton-gold ($d$+Au), and lead-lead (Pb+Pb) collisions over an energy range from a few GeV to a few TeV are analyzed by the Erlang distribution, the inverse power-law (the Hagedorn function), and the blast-wave fit, or the superposition of two-component step function. The excitation functions of parameters such as the mean transverse momentum, initial state temperature, kinetic freeze-out temperature, and transverse flow velocity increase (slightly) from a few GeV to a few TeV and from peripheral to central collisions. At high energy and in central collisions, large collision energy is deposited in the system, which results in high degrees of excitation and expansion.
description: 17 pages, 8 figures. International Journal of Theoretical Physics, accepted
MOESM1 of The Medicago truncatula nodule identity gene MtNOOT1 is required for coordinated apical-basal development of the root
Creators: name: Defeng Shen
name: Kulikova, Olga
name: Guhl, Kerstin
name: Franssen, Henk
name: Kohlen, Wouter
name: Bisseling, Ton
name: Geurts, René
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Additional file 1: Figure S1. Medicago MtNOOT1 is expressed in the root tip. Expression profiles are derived from the Medicago truncatula Gene Expression Atlas [29]. MtNOOT1 is targeted by the probe-sets Mtr.19586.1.S1_at, Mtr.27707.1.S1_s_at, and Mtr.39297.1.S1_s_at. Root 3 mm tip: 3 mm root tip [14]; adj tip: 1 cm root segment adjacent to 3 mm root tip [14]; Nod: nodules, all nodule samples are derived from [13]; dpi: days post inoculation. (DOCX)
Size reduction and partial decoupling of systems of equations
Creators: name: Wolf, Thomas
Publisher: name: arXiv
Year: 2003
Subjects: subject: Symbolic Computation (cs.SC)
subject: FOS: Computer and information sciences
subject: I.1.2

description: A method is presented that reduces the number of terms of systems of linear equations (algebraic, ordinary and partial differential equations). As a byproduct these systems have a tendency to become partially decoupled and are more likely to be factorizable or integrable. A variation of this method is applicable to non-linear systems. Modifications to improve efficiency are given and examples are shown. This procedure can be used in connection with the computation of the radical of a differential ideal (differential Groebner basis).
Additional file 9 of Obesity and dyslipidemia are associated with partially reversible modifications to DNA hydroxymethylation of apoptosis- and senescence-related genes in swine adipose-derived mesenchymal stem/stromal cells
Creators: name: Glasstetter, Logan M.
name: Oderinde, Tomiwa S.
name: Mirchandani, Mohit
name: Rajagopalan, Kamalnath Sankaran
name: Barsom, Samer H.
name: Thaler, Roman
name: Siddiqi, Sarosh
name: Zhu, Xiang-Yang
name: Tang, Hui
name: Jordan, Kyra L.
name: Saadiq, Ishran M.
name: van Wijnen, Andre J.
name: Eirin, Alfonso
name: Lerman, Lilach O.
Publisher: name: figshare
Year: 2023
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 9: Figure S8. Fluorescence microscopy TUNEL images in swine MSCs treated with a pro-apoptotic agent. Apoptosis was evaluated by terminal deoxynucleotidyl transferase dUTP nick-end-labeling assay in swine Lean- and Obese-MSCs treated either with staurosporine in DMSO at 20 nM for 24 h or with DMSO only. Representative images of DAPI-stained nuclei, TUNEL-labeled nuclei, and the merged channels are shown. Obese-MSCs showed attenuated development of apoptosis in response to staurosporine.
Oncideres dignus Bates 1865
Creators: name: Nearns, Eugenio H.
name: Tavakilian, Gérard L.
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Oncideres
Oncideres dignus

description: Oncideres dignus Bates, 1865b: 178
Holotype, male
 Type locality. Brazil, Amazonas, Tefé (previously Ega)
 Current name. Oncideres digna Bates, 1865
 Remarks. The type specimen is not found in MNHN or BMNH collections and is presumed to be lost.
description: Published as part of Nearns, Eugenio H. & Tavakilian, Gérard L., 2015, Onciderini Thomson, 1860 (Coleoptera: Cerambycidae: Lamiinae) types of the Muséum national d'Histoire naturelle (MNHN), with a brief history of the Coleoptera collection, pp. 1-47 in Insecta Mundi 2015 (459) on page 38, DOI: 10.5281/zenodo.5183066
Domain wall melting in spin-1 chains
Creators: name: Medenjak, Marko
name: De Nardis, Jacopo
Publisher: name: arXiv
Year: 2019
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Quantum Gases (cond-mat.quant-gas)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: In this letter we study the non-equilibrium spin dynamics in the non-integrable spin-1 XXZ chain, emerging after joining two macroscopic pure states with different magnetizations. Employing the so-called time-dependent variational principle (TDVP) we simulate the dynamics of the total magnetization in the right (left) half of the system up to times that are normally inaccessible by standard tDMRG methods. We identify three distinct phases depending on the anisotropy of the chain, corresponding to diffusive, marginally super-diffusive and insulating. We observe a transient ballistic behaviour with a crossover time that diverges as the isotropic point is approached. We conclude that on intermediate-large time scales the dynamics is well described by the integrable Landau-Lifschitz classical differential equation.
description: 5 pages, 4 figures
Un nouveau procurateur ducénaire anonyme à Orange
Creators: name: Rossignol, Benoît
name: Mignon, Jean-Marc
name: Hairy, Guillaume
Publisher: name: TYCHE – Beiträge zur Alten Geschichte, Papyrologie und Epigraphik
Year: 2022

description: Une nouvelle inscription d'Orange (France) honore un procurateur anonyme. Seule la fin de la carrière figure sur une base de statue remployée présentant une fonction liée à Arles, et les poste de procurator patrimonii et procurator Hispaniae Tarraconensis. Érigée par la cité d'Orange entre Trajan et les Sévères, c'est un des rares exemples d'épigraphie publique de la colonie.
description: TYCHE – Beiträge zur Alten Geschichte, Papyrologie und Epigraphik, Bd. 34 (2019)
Additional file of Genome-wide inference of regulatory networks in Streptomyces coelicolor
Creators: name: Castro-Melchor, Marlene
name: Charaniya, Salim
name: Karypis, George
name: Takano, Eriko
name: Wei-Shou Hu
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file of Genome-wide inference of regulatory networks in Streptomyces coelicolor
Real radiation at NNLO: e^+e^- to 2 jets through O(alpha_s^2)
Creators: name: Anastasiou, Charalampos
name: Melnikov, Kirill
name: Petriello, Frank
Publisher: name: arXiv
Year: 2004
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We present a calculation of the differential two jet cross section in e^+e^- annihilation through next-to-next-to-leading order in the strong coupling constant alpha_s. The calculation is performed using a new method for dealing with real radiation suggested by us recently. For the first time, the two jet event rate is computed directly, without any reference to the inclusive cross-section e^+e^- to hadrons. We also calculate the energy distribution of the leading jet in e^+e^- to 2 jets, and find significant modifications of the shape of this distribution at NNLO.
description: 4 pages, 1 figure
Lévy noise induced transitions and enhanced stability in a birhythmic van der Pol system
Creators: name: Yamapi, René
name: Yonkeu, Raoul Mbakob
name: Filatrella, Giovanni
name: Kurths, Jürgen
Publisher: name: arXiv
Year: 2019
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Adaptation and Self-Organizing Systems (nlin.AO)
subject: Biological Physics (physics.bio-ph)
subject: FOS: Physical sciences

description: This work describes the effects of Lévy noise on a birhythmic van der Pol like oscillator. Numerical simulations demonstrate that the noise induced escapes from an attractor to another are not markedly different from escapes between stable points in an ordinary potential, albeit the attractors are separated by a barrier of a quasi (or pseudo) potential. However, some differences appear, and are more pronounced when the Lévy distribution index is close to two.
Additional file 5 of Identification of Vitis vinifera MYB transcription factors and their response against grapevine berry inner necrosis virus
Creators: name: Wang, Xianyou
name: Zhao, Shanshan
name: Zhou, Ruijin
name: Liu, Yunli
name: Guo, Longlong
name: Hu, Huiling
Publisher: name: figshare
Year: 2023
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 5: Table S5. The primers sequences used in this study.
Oncideres fabricii Thomson 1868
Creators: name: Nearns, Eugenio H.
name: Tavakilian, Gérard L.
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Oncideres
Oncideres fabricii

description: Oncideres fabricii Thomson, 1868a: 78
Holotype, female
 Type locality. Brazil, Pará
 Current name. Oncideres cephalotes Bates, 1865
 Remarks. Fragoso and Lane (1970) presented a photograph of a male specimen and indicated it was Thomson’s type (their Fig. 6). However, the holotype specimen is not found in MNHN collection and is presumed to be lost.
description: Published as part of Nearns, Eugenio H. & Tavakilian, Gérard L., 2015, Onciderini Thomson, 1860 (Coleoptera: Cerambycidae: Lamiinae) types of the Muséum national d'Histoire naturelle (MNHN), with a brief history of the Coleoptera collection, pp. 1-47 in Insecta Mundi 2015 (459) on page 38, DOI: 10.5281/zenodo.5183066
Das Jahr 129 v. Chr.: ein Senator im politischen Abseits?
Creators: name: Schietinger, Georg-Philipp
Publisher: name: TYCHE – Beiträge zur Alten Geschichte, Papyrologie und Epigraphik
Year: 2022

description: Die letzten Lebensjahre des Scipio Aemilianus seit seiner siegreichen Rückkehr aus Numantia 132 v.Chr. werden von der modernen Altertumsforschung klar negativ be­urteilt: Besonders durch seinen Widerstand gegen die gracchische Ackerkommission habe sich der jüngere Africanus ins politische Abseits manövriert. Wegen seiner mehrfach öffentlich kundgetanen Billigung der Ermordung seines Vetters und Schwagers Ti. Gracchus habe Scipio die Gunst des einfachen Volkes eingebüßt. So erscheinen seine politischen Aktivitäten bis zu seinem plötzlichen Tod 129 v.Chr. als Serie von Rückschlägen und Misserfolgen. Dieser Beitrag stellt sich diesem Narrativ vom Niedergang Scipios entgegen und zeigt auf, dass der jüngere Africanus kurz vor seinem Tod weder politisch und innerfamiliär isoliert noch in der römischen Innenpolitik gescheitert war – ganz im Gegenteil. Dabei stehen sein wechselhaftes Verhältnis zu den beiden Gracchen und Sempronia, das Plebiszit über das Ober­kommando für den Aristonikos-Krieg 131 v.Chr., die Ernennung des princeps sena­tus im selben Jahr und sein aufsehenerregendes politisches Engagement 129 v.Chr. im Mittelpunkt.
description: TYCHE – Beiträge zur Alten Geschichte, Papyrologie und Epigraphik, Bd. 34 (2019)
Bruchstück eines Kultgesetzes von Olympia aus der 1. Hälfte des 6. Jh. v. Chr. (BrU 9)
Creators: name: Siewert, Peter
Publisher: name: TYCHE – Beiträge zur Alten Geschichte, Papyrologie und Epigraphik
Year: 2022

description: Ein Bronze-Täfelchen, das ursprünglich als Teil des Hüftschutzes einer Hoplitenrüstung (pteryx 'Panzerschuppe') gedient hatte, wurde in der 1. Hälfte des 6. Jh. v. Chr. als Schriftträger wiederverwendet. Die sechszeilige Inschrift ist im Bustrophedon-Stil geschrieben: davon steht eine Zeile auf dem Kopf (sog. Schlangenschrift). Aus der Nennung von Zeus und φράτρα lässt sich vermuten, dass der Text ein Kultgesetz wiedergab; doch da zwischen den sechs kurzen Zeilen kein sachlicher oder grammatischer Zusammenhang erkennbar ist, lassen sich keine näheren Aussagen über den Inhalt der Urkunde entnehmen. Als bisher älteste Bronze-Urkunde Olympias gestattet sie neue Einblicke in die frühe Schriftlichkeit des Heiligtums, insbesondere in Formen des Delta und Rho und der Interpunktion. Schließlich dokumentiert die Inschrift den Schriftgebrauch in Olympia in der Anfangsphase der vier panhellenischen Agone.
description: TYCHE – Beiträge zur Alten Geschichte, Papyrologie und Epigraphik, Bd. 34 (2019)
The exact description of NS5-branes in the Penrose limit
Creators: name: Sfetsos, K.
Publisher: name: arXiv
Year: 2003
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We construct plane wave backgrounds with time-dependent profiles corresponding to Penrose limits of NS5-branes with transverse space symmetry group broken from SO(4) to SO(2)\times Z_N. We identify the corresponding exact theory as the five-dimensional Logarithmic Conformal Field Theory (CFT) arising from the contraction of the SU(2)_{N'}/U(1)\times SL(2,R)_{-N} exact CFT, times R^5. We study several general aspects and construct the free field representation in this theory. String propagation and spectra are also considered and explicitly solved in the light-cone gauge.
description: 28 pages, Latex
AS RECENTES TRANSFORMAÇÕES NAS AGRICULTURAS FAMILIARES PARANAENSES: ANÁLISE A PARTIR DAS INFORMAÇÕES DE OCUPAÇÕES E RENDAS DO PERÍODO 2001-2004
Creators: name: SOUZA, MARCELINO DE
name: NASCIMENTO, CARLOS ALVES
name: SOUZA, MARCELINO DE
name: NASCIMENTO, CARLOS ALVES
Publisher: name: Unknown
Year: 2006
Subjects: subject: Agribusiness
subject: Agricultural and Food Policy
subject: Community/Rural/Urban Development
subject: Consumer/Household Economics
subject: Farm Management
subject: Ocupações agrícolas e rurais
subject: rendas familiares
subject: novo rural
subject: agricultura familiar
subject: desenvolvimento rural

description: Este trabalho é uma atualização de artigo anteriormente apresentado onde se analisa o comportamento das ocupações e das fontes de rendas das famílias rurais e agrícolas paranaenses utilizando-se como base Tabulações Especiais elaboradas a partir do processamento dos microdados das Pesquisas Nacionais de Amostras de Domicílios (PNADs) dos anos de 2001 e 2004. As estimativas mostraram que houve uma redução significativa do número de famílias pertencentes ao universo da agricultura familiar; crescimento do número de famílias de agricultores familiares com os menores estratos de áreas que residem em áreas urbanas com atividade agrícola e pluriativos, ou seja, que combinam atividades agrícolas e não-agrícolas, o que se configura num novo aspecto da ruralidade. Em relação às rendas verificou-se um aumento da participação das rendas agrícolas entre as famílias pluriativas da agricultura familiar e finalmente, as rendas de aposentadorias/pensões continuam a representar maior significado nas famílias de conta-própria agrícolas, mas agora também nos grupos de famílias de empregados e conta-própria não-agrícolas. Infere-se que, de um lado, o reduzido dinamismo econômico dos municípios rurais paranaenses pode estar causando a redução do universo da agricultura familiar. Os resultados apontam para a necessidade de continuar as pesquisas tendo em vista a confirmação ou não das tendências apontadas.
MOESM10 of The Medicago truncatula nodule identity gene MtNOOT1 is required for coordinated apical-basal development of the root
Creators: name: Defeng Shen
name: Kulikova, Olga
name: Guhl, Kerstin
name: Franssen, Henk
name: Kohlen, Wouter
name: Bisseling, Ton
name: RenÃ© Geurts
Publisher: name: figshare
Year: 2019
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Plant Biology

description: Additional file 10: Figure S10. The NAC domain transcription factors MtVND6 and MtVND7, but not MtSND1, are lower expressed in zone 3 of Mtnoot1 tnk507 roots when compared to wild-type. The data represent means + SEM of three independent experiments. Student t-test was performed to assess significant differences (ns: not significant). (DOCX)
CONSTRUÇÃO DE REDES E INCLUSÃO SOCIAL NO TERRITÓRIO CITRÍCOLA PAULISTA
Creators: name: Almeida, Luiz Manoel De Moraes Camargo
name: Ferrante, Vera Lucia Silveira Botta
name: Vieira, Ana Claudia
name: Almeida, Luiz Manoel De Moraes Camargo
name: Ferrante, Vera Lucia Silveira Botta
name: Vieira, Ana Claudia
Publisher: name: Unknown
Year: 2006
Subjects: subject: Food Consumption/Nutrition/Food Safety
subject: Food Security and Poverty
subject: Political Economy
subject: Redes de Poder
subject: Instituições
subject: Consórcios Rurais
subject: Capital Social
subject: Políticas Públicas de Segurança Alimentar e Citricultores

description: O objetivo principal deste trabalho é apresentar e discutir alternativas no âmbito das políticas públicas e da organização dos produtores que possam se contrapor ao processo de exclusão social dos pequenos produtores de laranja vem sofrendo na dinâmica atual da rede citrícola paulista e, ao mesmo tempo, possam enfrentar o aviltamento das condições de trabalho dos trabalhadores assalariados rurais, o que tem ocorrido através da chamada flexibilização dos direitos trabalhistas. Nesse contexto, o presente trabalho aborda o sistema de consórcios de produtores rurais, como novo modelo organizacional coletivo na dinâmica da rede citrícola paulista. Tem como objetivo central analisar a atuação dos consórcios de produtores na estrutura de dominância da rede citrícola paulista tendo como norte sua contribuição para o aumento dos recursos de poder dos atores excluídos. O presente trabalho analisa o conjunto dos recursos de poder de um consórcio localizado na microrregião de Novo Horizonte-SP, que se apresenta como um modelo ideal, pois apresenta elementos que se cristalizam em alternativas efetivas de inclusão social. Finalmente, remete-se a discussão de redes alternativas de capital social no território citrícola paulista, no âmbito das políticas públicas de segurança alimentar local. Tomo como princípio que a segurança alimentar deve ser tratada de maneira ampla, de forma abarcar não somente as condições de saúde das pessoas, de higiene dos alimentos e da autenticidade da produção, mas também a melhora das condições de renda e emprego de pequenos agricultores e trabalhadores rurais.
A Versatile and Accurate Method for Halo Mass Determination from Phase-Space Distribution of Satellite Galaxies
Creators: name: Li, Zhao-Zhou
name: Qian, Yong-Zhong
name: Han, Jiaxin
name: Wang, Wenting
name: Jing, Y. P.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We propose a versatile and accurate method to estimate the halo mass and concentration from the kinematics of satellite galaxies. We construct the 6D phase-space distribution function of satellites from a cosmological simulation based on the similarity of internal dynamics for different halos. Within the Bayesian statistical framework, not only can we infer the halo mass and concentration efficiently, but also treat various observational effects, including the selection function, incomplete data, and measurement errors, in a rigorous and straightforward manner. Through tests with mock samples, we show that our method is valid and accurate, and more precise than pure steady-state methods. It can constrain the halo mass to within ~ 20% using only 20 tracers and has a small intrinsic uncertainty of ~ 10%. In addition to the clear application to the Milky Way and similar galaxies, our method can be extended to galaxy groups or clusters.
description: 17 pages, 11 figures, accepted for publication in ApJ
Oncideres mydas Lucas 1859
Creators: name: Nearns, Eugenio H.
name: Tavakilian, Gérard L.
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Oncideres
Oncideres mydas

description: Oncideres mydas Lucas, 1859: 190
Holotype, male
 Type locality. Brazil
 Current name. Tybalmia mydas (Lucas, 1859)
 Remarks. The type specimen is not found in MNHN collection and is presumed to be lost.
description: Published as part of Nearns, Eugenio H. & Tavakilian, Gérard L., 2015, Onciderini Thomson, 1860 (Coleoptera: Cerambycidae: Lamiinae) types of the Muséum national d'Histoire naturelle (MNHN), with a brief history of the Coleoptera collection, pp. 1-47 in Insecta Mundi 2015 (459) on page 38, DOI: 10.5281/zenodo.5183066
Finite Coulomb Crystal Formation
Creators: name: Vasut, J.
name: Hyde, T. W.
name: Barge, L.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Space Physics (physics.space-ph)
subject: FOS: Physical sciences

description: Dust particles immersed within a plasma environment, such as those found in planetary rings or comets, will acquire an electric charge. If the ratio of the inter-particle potential energy to average kinetic energy is large enough the particles will form either a "liquid" structure with short-range ordering or a crystalline structure with long-range ordering. Since their discovery in laboratory environments in 1994, such crystals have been the subject of a variety of experimental, theoretical and numerical investigations. Most numerical and theoretical investigations have examined infinite systems assuming periodic boundary conditions. Since experimentally observed crystals can be comprised of a few hundred particles, this often leads to discrepancies between predicted theoretical results and experimental data. In addition, recent studies have concentrated on the importance of random charge variations between individual dust particles, but very little on the importance of size variations between the grains. Such size variations naturally lead to inter-grain charge variations which can easily become more important than those due to random charge fluctuations (which are typically less than one percent). Although such size variations can be largely eliminated experimentally by introducing mono-dispersive particles, many laboratory systems and all astrophysical environments contain significant size distributions. This study utilizes a program to find the equilibrium positions of a dusty plasma system as well as a modified Barnes-Hut code to model the dynamic behavior of such systems. It is shown that in terms of inter-particle spacing and ordering, finite systems are significantly different than infinite ones, particularly for the most-highly ordered states.
description: 6 pages, Presented at COSPAR '03