cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1 of seqQscorer: automated quality control of next-generation sequencing data using machine learning
Creators: name: Albrecht, Steffen
name: Sprang, Maximilian
name: Andrade-Navarro, Miguel A.
name: Jean-Fred Fontaine
Publisher: name: figshare
Year: 2021
Subjects: subject: Statistics
subject: FOS: Mathematics
subject: Artificial Intelligence and Image Processing
subject: FOS: Computer and information sciences

description: Additional file 1: Figure S1. Statistical guidelines computed on the ENCODE files selection. Figure S2. Predictive performance of tuned machine learning models. Figure S3. Within-experiment benchmarks. Figure S4. Cross-species generalization. Figure S5. Paired-end human ChIP-seq data subset. Figure S6. Counts of broad peak targets in the ChIP-seq samples. Figure S7. Counts of sample names in the DNase-seq samples. Figure S8. Comparison of predictive and calibration performance. Figure S9. Peak-type specific one-feature predictions. Figure S10. Predictive performance of peak-type specific classification models. Figure S11. Cross validated predictions of the optimal generic model across most frequent ChIP-seq protein targets. Figure S12. External validations (RNA-Seq). Figure S13. Independent validation on Cistrome’s datasets. Figure S14. ENCODE guidelines and status.
Der Bitterfelder Muldestausee als Sediment- und Schadstoffsenke
Creators: name: Junge, Frank W.
Publisher: name: Bundesanstalt für Gewässerkunde, Koblenz
Year: 2015
Subjects: subject: Water resources research

description: Hydrologie und Wasserbewirtschaftung / BfG – Jahrgang: 59.2015,6 - ISSN 1439-1783
Formation of laser plasma channels in a stationary gas
Creators: name: Dunaevsky, A.
name: Goltsov, A.
name: Greenberg, J.
name: Suckewer, S.
name: Valeo, E.
name: Fisch, N. J.
Publisher: name: arXiv
Year: 2005
Subjects: subject: Plasma Physics (physics.plasm-ph)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: The formation of plasma channels with nonuniformity of about +- 3.5% has been demonstrated. The channels had a density of 1.2x10^19 cm-3 with a radius of 15 um and with length >= 2.5 mm. The channels were formed by 0.3 J, 100 ps laser pulses in a nonflowing gas, contained in a cylindrical chamber. The laser beam passed through the chamber along its axis via pinholes in the chamber walls. A plasma channel with an electron density on the order of 10^18 - 10^19 cm-3 was formed in pure He, N2, Ar, and Xe. A uniform channel forms at proper time delays and in optimal pressure ranges, which depend on the sort of gas. The influence of the interaction of the laser beam with the gas leaking out of the chamber through the pinholes was found insignificant. However, the formation of an ablative plasma on the walls of the pinholes by the wings of the radial profile of the laser beam plays an important role in the plasma channel formation and its uniformity. A low current glow discharge initiated in the chamber slightly improves the uniformity of the plasma channel, while a high current arc discharge leads to the formation of overdense plasma near the front pinhole and further refraction of the laser beam. The obtained results show the feasibility of creating uniform plasma channels in non-flowing gas targets.
description: 15 pages, 7 figures, submitted to Physics of Plasmas
Additional file 1 of A mixed-methods survey to explore issues with virtual consultations for musculoskeletal care during the COVID-19 pandemic
Creators: name: Gilbert, Anthony W
name: Booth, Gregory
name: Betts, Tony
name: Goldberg, Andy
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Pharmacology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1.
Hydromorphologische Methoden zur Beurteilung von Breitenverhältnissen am Beispiel der Elbe
Creators: name: König, Frauke
Publisher: name: Bundesanstalt für Gewässerkunde, Koblenz
Year: 2015
Subjects: subject: Water resources research

description: Hydrologie und Wasserbewirtschaftung / BfG – Jahrgang: 59.2015,6 - ISSN 1439-1783
How does enterprise IoT traffic evolve? Real-world evidence from a Finnish operator
Creators: name: Finley, Benjamin
name: Benseny, Jaume
name: Vesselkov, Alexandr
name: Walia, Jaspreet
Publisher: name: arXiv
Year: 2020
Subjects: subject: Networking and Internet Architecture (cs.NI)
subject: FOS: Computer and information sciences

description: The adoption of Internet of Things (IoT) technologies in businesses is increasing and thus enterprise IoT (EIoT) is seemingly shifting from hype to reality. However, the actual use of EIoT over significant timescales has not been empirically analyzed. In other words, the reality remains unexplored. Furthermore, despite the variety of EIoT verticals, the use of IoT across vertical industries has not been compared. This paper uses a two-year EIoT dataset from a major Finnish mobile network operator to investigate device use across industries, cellular traffic patterns, and mobility patterns. We present a variety of novel findings: EIoT traffic volume per device has increased three-fold over the last two years, the share of LTE-enabled devices has remained low at around 2% and that 30% of EIoT devices are still 2G only, and there are order of magnitude differences between different industries' EIoT traffic and mobility. We also show that daily traffic can be clustered into only three patterns, differing mainly in the presence and timing of a peak hour. Beyond these descriptive results, modeling and forecasting is conducted for both traffic and mobility. We forecast the total daily EIoT traffic through a temporal regression model and achieve an error of about 15% over medium-term (30 to 180 day) horizons. We also model device mobility through a Markov mixture model and quantify the upper bound of predictability for device mobility.
description: Accepted Manuscript. arXiv admin note: substantial text overlap with arXiv:1911.02877
Sedimentrückhalt in den Elbauen
Creators: name: Krüger, Frank
Publisher: name: Bundesanstalt für Gewässerkunde, Koblenz
Year: 2015
Subjects: subject: Water resources research

description: Hydrologie und Wasserbewirtschaftung / BfG – Jahrgang: 59.2015,6 - ISSN 1439-1783
Effective affinities in microarray data
Creators: name: Heim, T.
name: Wolterink, J. Klein
name: Carlon, E.
name: Barkema, G. T.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Biomolecules (q-bio.BM)
subject: Soft Condensed Matter (cond-mat.soft)
subject: Chemical Physics (physics.chem-ph)
subject: FOS: Biological sciences
subject: FOS: Physical sciences

description: In the past couple of years several studies have shown that hybridization in Affymetrix DNA microarrays can be rather well understood on the basis of simple models of physical chemistry. In the majority of the cases a Langmuir isotherm was used to fit experimental data. Although there is a general consensus about this approach, some discrepancies between different studies are evident. For instance, some authors have fitted the hybridization affinities from the microarray fluorescent intensities, while others used affinities obtained from melting experiments in solution. The former approach yields fitted affinities that at first sight are only partially consistent with solution values. In this paper we show that this discrepancy exists only superficially: a sufficiently complete model provides effective affinities which are fully consistent with those fitted to experimental data. This link provides new insight on the relevant processes underlying the functioning of DNA microarrays.
description: 8 pages, 6 figures
Entwicklung der partikulären Schadstoffbelastung der Elbe
Creators: name: Schwartz, René
Publisher: name: Bundesanstalt für Gewässerkunde, Koblenz
Year: 2015
Subjects: subject: Water resources research

description: Hydrologie und Wasserbewirtschaftung / BfG – Jahrgang: 59.2015,6 - ISSN 1439-1783
Spin-$\frac{3}{2}$ doubly charmed baryon contribution to the magnetic moments of the spin-$\frac{1}{2}$ doubly charmed baryons
Creators: name: Li, Hao-Song
name: Yang, Wen-Li
Publisher: name: arXiv
Year: 2020
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Experiment (hep-ex)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We have systematically investigated the magnetic moments of spin-$\frac{1}{2}$ doubly charmed baryons in the framework of the heavy baryon chiral perturbation theory. In this paper, one loop corrections with intermediate spin-$\frac{1}{2}$ and spin-$\frac{3}{2}$ doubly charmed baryon states are considered. The numerical results are calculated to next-to-leading order: $μ_{Ξ^{++}_{cc}}=0.35μ_{N}$, $μ_{Ξ^{+}_{cc}}=0.62μ_{N}$, $μ_{Ω^{+}_{cc}}=0.41μ_{N}$. Our results may be useful for future experiment and chiral extrapolation of the lattice QCD.
Aspekte des Schadstoff-Sedimentmanagements im Bereich der Tideelbe
Creators: name: Schwartz, René
Publisher: name: Bundesanstalt für Gewässerkunde, Koblenz
Year: 2015
Subjects: subject: Water resources research

description: Hydrologie und Wasserbewirtschaftung / BfG – Jahrgang: 59.2015,6 - ISSN 1439-1783
Additional file 2 of Identification and characterization of ugpE associated with the full virulence of Streptococcus suis
Creators: name: Yang, Qiulei
name: Li, Na
name: Zheng, Yu
name: Tian, Yanyan
name: Liang, Qiao
name: Zhao, Miaomiao
name: Chu, Hong
name: Gong, Yan
name: Wu, Tong
name: Wei, Shaopeng
name: Wang, He
name: Yan, Guangmou
name: Li, Fengyang
name: Lei, Liancheng
Publisher: name: figshare
Year: 2025
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 2. Primers used in this study. Primer sequences are listed.
Additional file 2 of A mixed-methods survey to explore issues with virtual consultations for musculoskeletal care during the COVID-19 pandemic
Creators: name: Gilbert, Anthony W
name: Booth, Gregory
name: Betts, Tony
name: Goldberg, Andy
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Pharmacology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 2.
Domain Control by Adjusting Anisotropic Stress in Pyrochlore Oxide Cd2Re2O7
Creators: name: Tajima, Satoshi
name: Hirai, Daigorou
name: Kinoshita, Yuto
name: Tokunaga, Masashi
name: Akiba, Kazuto
name: Kobayashi, Tatsuo C.
name: Hirose, Hishiro T.
name: Hiroi, Zenji
Publisher: name: arXiv
Year: 2020
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The 5d pyrochlore oxide Cd2Re2O7 exhibits successive phase transitions from a cubic pyrochlore structure (phase I) to a tetragonal structure without inversion symmetry below Ts1 of ~200 K (phase II) and further to another noncentrosymmetric tetragonal structure below Ts2 of ~120 K (phase III). The two low-temperature phases may be characterized by odd-parity multipolar orders induced by the Fermi liquid instability of the spin-orbit-coupled metal. To control the tetragonal domains generated by the transitions and to obtain a single-domain crystal for the measurements of anisotropic properties, we prepared single crystals with the (0 0 1) surface and applied biaxial and uniaxial stresses along the plane. Polarizing optical microscopy observations revealed that inducing a small strain of approximately 0.05% could flip the twin domains ferroelastically in a reversible fashion at low temperatures, which evidences that the tetragonal deformation switches at Ts2 between c > a for phase II and c < a for phase III. Resistivity measurements using single-domain crystals under uniaxial stress showed that the anisotropy was maximum at around Ts2 and turned over across Ts2: resistivity along the c axis is larger (smaller) than that along the a axis by ~25% for phase II (III) at around Ts2. These large anisotropies probably originate from spin-dependent scattering in the spin-split Fermi surfaces of the cluster electric toroidal quadrupolar phases of Cd2Re2O7.
description: 16 pages, 13 figures, J. Phys. Soc. Jpn in press
Heat transport by Dirac fermions in normal/superconducting graphene junctions
Creators: name: Yokoyama, Takehito
name: Linder, Jacob
name: Sudbo, Asle
Publisher: name: arXiv
Year: 2008
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: We study heat transport in normal/superconducting graphene junctions. We find that while the thermal conductance displays the usual exponential dependence on temperature, reflecting the s-wave symmetry of the superconductor, it exhibits an unusual oscillatory dependence on the potential height or the length of the barrier region. This oscillatory dependence stems from the emergent low-energy relativistic nature of fermions in graphene, essentially different from the result in conventional normal metal/superconductor junctions.
description: 4 pages, 3 figures
Hierarchical Representation via Message Propagation for Robust Model Fitting
Creators: name: Lin, Shuyuan
name: Wang, Xing
name: Xiao, Guobao
name: Yan, Yan
name: Wang, Hanzi
Publisher: name: arXiv
Year: 2020
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: In this paper, we propose a novel hierarchical representation via message propagation (HRMP) method for robust model fitting, which simultaneously takes advantages of both the consensus analysis and the preference analysis to estimate the parameters of multiple model instances from data corrupted by outliers, for robust model fitting. Instead of analyzing the information of each data point or each model hypothesis independently, we formulate the consensus information and the preference information as a hierarchical representation to alleviate the sensitivity to gross outliers. Specifically, we firstly construct a hierarchical representation, which consists of a model hypothesis layer and a data point layer. The model hypothesis layer is used to remove insignificant model hypotheses and the data point layer is used to remove gross outliers. Then, based on the hierarchical representation, we propose an effective hierarchical message propagation (HMP) algorithm and an improved affinity propagation (IAP) algorithm to prune insignificant vertices and cluster the remaining data points, respectively. The proposed HRMP can not only accurately estimate the number and parameters of multiple model instances, but also handle multi-structural data contaminated with a large number of outliers. Experimental results on both synthetic data and real images show that the proposed HRMP significantly outperforms several state-of-the-art model fitting methods in terms of fitting accuracy and speed.
Ist der Dialog eine notwendige epistemologische Voraussetzung für die Findung der Wahrheit?
Creators: name: Grey, Mary C.
Publisher: name: Ökumenische Rundschau
Year: 2025

description: Ökumenische Rundschau, Bd. 42 Nr. 2 (1993): Ökumenische Rundschau, Band 42, Heft 2
Epitaxial Ferroelectric La-doped Hf0.5Zr0.5O2 Thin Films
Creators: name: Song, Tingfeng
name: Bachelet, Romain
name: Saint-Girons, Guillaume
name: Solanas, Raul
name: Fina, Ignasi
name: Sanchez, Florencio
Publisher: name: arXiv
Year: 2020
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Doping ferroelectric Hf0.5Zr0.5O2 with La is a promising route to improve endurance. However, the beneficial effect of La on the endurance of polycrystalline films may be accompanied by degradation of the retention. We have investigated the endurance - retention dilemma in La-doped epitaxial films. Compared to undoped epitaxial films, large values of polarization are obtained in a wider thickness range, whereas the coercive fields are similar, and the leakage current is substantially reduced. Compared to polycrystalline La-doped films, epitaxial La-doped films show more fatigue but there is not significant wake-up effect and endurance-retention dilemma. The persistent wake-up effect common to polycrystalline La-doped Hf0.5Zr0.5O2 films, is limited to a few cycles in epitaxial films. Despite fatigue, endurance in epitaxial La-doped films is more than 1010 cycles, and this good property is accompanied by excellent retention of more than 10 years. These results demonstrate that wake-up effect and endurance-retention dilemma are not intrinsic in La-doped Hf0.5Zr0.5O2.
Energetics of activity in the abalone: haliotis kamtschatkana
Creators: name: Donovan, Deborah Anne
Publisher: name: University of British Columbia
Year: 2009

description: The purpose of this thesis was to investigate several aspects of the energetic costs of activity in the Northern abalone, Haliotis kamtschatkana. The percentage of daily consumed energy partitioned to activity was calculated by first measuring summer and winter energy budgets in which abalone were inactive during measurements of respiration and mucus secretion, then by measuring respiration and mucus-secretion for active animals by integrating summer and winter activity budgets with energy equivalents for each activity. Energy expenditure due to metabolic changes during exposure to environmental stressors, measured as increases in blood-glucose levels and oxygen consumption, was also related to the summer energy budget. Abalone locomotion was investigated in several ways. Cost of transport was determined for a range of speeds and sizes by inducing abalone to locomote in respirometers and measuring oxygen consumption at known speeds. Relative contributions of aerobic and anaerobic metabolism were measured by analyzing muscle tissues for anaerobic metabolites after locomotion had occurred and comparing amounts of accumulated metabolites to amount of oxygen consumed during locomotion. Pedal morphology during locomotion was also investigated to detennine if possible energy-saving changes occur. This was accomplished by videotaping the pedal soles of locomoting abalone and measuring various foot morphometries. Activity, in the form of increased respiration and mucus secretion, accounted for a substantial portion of daily consumed energy during both seasons. Exposure to predatory seastars significantly increased blood-glucose titers and oxygen consumption, resulting in a metabolic increase equivalent to 0.3% of daily summer energy consumption. Cost of transport for abalone was less than that of other gastropods, possibly due to its larger relative size. Mucus secretion during locomotion did not vary with speed, but was less than the amount needed for substratum adherence. During locomotion, tauropine and D-lactate levels increased significantly in foot muscle while arginine decreased. Morphological analyses of pedal waves showed that the pedal sole area decreased with increasing speed, and the area of the foot incorporated into pedal waves increased. Together, these changes translated into a decrease pedal sole area in contact with the substratum.
Potential Early Markets for Fusion Energy
Creators: name: Handley, Malcolm C.
name: Slesinski, Daniel
name: Hsu, Scott C.
Publisher: name: arXiv
Year: 2021
Subjects: subject: Physics and Society (physics.soc-ph)
subject: Plasma Physics (physics.plasm-ph)
subject: FOS: Physical sciences

description: We identify potential early markets for fusion energy and their projected cost targets, based on analysis and synthesis of many relevant, recent studies and reports. Because private fusion companies aspire to start commercial deployment before 2040, we examine cost requirements for fusion-generated electricity, process heat, and hydrogen production based on today's market prices but with various adjustments relating to possible scenarios in 2035, such as "business-as-usual," high renewables penetration, and carbon pricing up to 100 \$/tCO$_2$. Key findings are that fusion developers should consider focusing initially on high-priced global electricity markets and including integrated thermal storage in order to maximize revenue and compete in markets with high renewables penetration. Process heat and hydrogen production will be tough early markets for fusion, but may open up to fusion as markets evolve and if fusion's levelized cost of electricity falls below 50 \$/MWh$_\mathrm{e}$. Finally, we discuss potential ways for a fusion plant to increase revenue via cogeneration (e.g., desalination, direct air capture, or district heating) and to lower capital costs (e.g., by minimizing construction times and interest or by retrofitting coal plants).
description: 17 pages, 6 figures, 11 tables, submitted for publication
Additional file 1 of AQP5 trafficking is regulated by its C-terminal tail and interaction with prolactin-inducible protein
Creators: name: D’Agostino, Claudia
name: Zindy, Egor
name: Conrard, Louise
name: Takkal, Amel
name: Gregoire, Françoise
name: Bolaky, Nargis
name: Törnroth-Horsefield, Susanna
name: Perret, Jason
name: Delporte, Christine
Publisher: name: figshare
Year: 2025
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Developmental Biology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences

description: Supplementary Material 1
Statistical exploration of halo anisotropic clustering and intrinsic alignments with the mass-Peak Patch algorithm
Creators: name: Blancard, Bruno Regaldo-Saint
name: Codis, Sandrine
name: Bond, J. Richard
name: Stein, George
Publisher: name: arXiv
Year: 2021
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: The anisotropy or triaxiality of massive dark matter haloes largely defines the structure of the cosmic web, in particular the filaments that join the haloes together. Here we investigate such oriented correlations in mass-Peak Patch halo catalogues by using the initial strain tensor of spherical proto-halo regions to orient the haloes. To go beyond the spherically averaged two-point correlation function of haloes we use oriented stacks to compute oriented two-point correlations: we explicitly break isotropy by imposing a local frame set by the strain tensor of the reference halo before stacking neighbouring haloes. Beyond the exclusion zone of the reference halo, clustering is found to be strongly enhanced along the major direction of the strain tensor as expected. This anisotropic clustering of haloes along filaments is further quantified by using a spherical harmonics decomposition. Furthermore, we compute the evolution of cluster-scale halo principal directions relative to those of their neighbours and show that there are strong correlations extending up to very large scales. In order to provide calculations more suitable to observational confrontations, we also utilize 2D projected versions of some equivalent correlation functions. Finally, we show that the multipole structure of the mass-peak patch halo's anisotropic clustering can be qualitatively captured in an analytic treatment based on peak theory. Though highly informative, analytic evaluation involves extensive use of Monte Carlo methods, which is also what the simulated catalogue uses, taking into account as they do the adaptive nature of the mass-peak patch mass hierarchy and all non-local complexities associated with the exclusion of smaller haloes overlapping with larger ones: there is no substitute for the mass-Peak Patch simulation-based determination of oriented and anisotropic correlations.
description: 22 pages, 15 figures, accepted by MNRAS
title: Un rilievo da Roma agli Uffizi.
title: Un rilievo da Roma agli Uffizi.
title: From Rome to Florence.
title: From Rome to Florence.
titleType: Subtitle
Creators: name: D'Andrea, Francesca
Publisher: name: Deutsches Archäologisches Institut
Year: 2021
Subjects: subject: Archaeology
subject: Roman art
subject: History of collections
subject: Roman historical reliefs
subject: Archaeology
subject: Roman art
subject: History of collections
subject: Roman historical reliefs
subject: Archaeology
subject: Roman art
subject: History of collections
subject: Roman historical reliefs

description: Mitteilungen des Deutschen Archäologischen Instituts, Römische Abteilung, Bd. 127 (2021)
description: The object of this paper is a Roman relief discovered in Rome and now exhibited at the Galleria degli Uffizi in Florence. Although the relief has been known since the Renaissance, its provenance, chronology and interpretation are still a matter of debate. The first part of this study retraces the modern history of the relief, from the Villa Medici Collection to the Uffizi, through the examination of the antiquarian, iconographic and archival sources. Then attention is devoted to the archaeological study. The scene depicts the sacrifice of a bull, performed by the victimarii, in the presence of a togatus, two children holding a shield, a personification and, significantly, a palm tree. The paper offers a stylistic and iconographic analysis and an explanation of the relief, hitherto poorly investigated.
Automated Detection of Accelerating Solar Eruptions using Parabolic Hough Transform
Creators: name: Patel, Ritesh
name: Pant, Vaibhav
name: Iyer, Priyanka
name: Banerjee, Dipankar
name: Mierla, Marilena
name: West, Matthew J.
Publisher: name: arXiv
Year: 2020
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: Solar eruptions such as Coronal Mass Ejections (CMEs) observed in the inner solar corona (up to 4 R$_{\odot}$) show acceleration profiles which appear as parabolic ridges in height-time plots. Inspired by the white-light automated detection algorithms, Computer Aided CME Tracking System (CACTus) and Solar Eruptive Events Detection System (SEEDS), we employ the parabolic Hough Transform for the first time to automatically detect off-disk solar eruptions {from height-time plots. Due to the limited availability of white-light observations in the inner corona, we use Extreme UltraViolet (EUV) images of the Sun. In this paper we present a new algorithm, CME Identification in Inner Solar Corona (CIISCO), which is based on Fourier motion filtering and the parabolic Hough transform, and demonstrate its implementation using EUV observations taken from {\it Atmospheric Imaging Assembly} (AIA) on-board the Solar Dynamics Observatory (SDO), {\it Extreme Ultra Violet Imager} (EUVI) on-board the STEREO-A and B satellites, and {\it Sun Watcher using Active Pixel System detector and Image Processing} (SWAP) Imager on-board PROBA2. We show that CIISCO is able to identify any {off-disk} outward moving feature in EUV images. The use of automated detection algorithms, like CIISCO, can potentially be used to provide early warnings of CMEs if an EUV telescope is located at $\pm$ 90$^{\circ}$ from the Sun-Earth line, providing CME characteristics and kinematics close to the Sun. This paper also presents the limitations of this algorithm and the prospects for future improvement.
description: Accepted for publication in Solar Physics; 27 pages, 10 figures, 1 table
Die Herausforderung der Ökumene durch die Zivilgesellschaft
Creators: name: Planer-Friedrich, Götz
Publisher: name: Ökumenische Rundschau
Year: 2025

description: Ökumenische Rundschau, Bd. 42 Nr. 2 (1993): Ökumenische Rundschau, Band 42, Heft 2
Josephson current through a molecular transistor in a dissipative environment
Creators: name: Novotny, Tomas
name: Rossini, Alessandra
name: Flensberg, Karsten
Publisher: name: arXiv
Year: 2005
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We study the Josephson coupling between two superconductors through a single correlated molecular level, including Coulomb interaction on the level and coupling to a bosonic environment. All calculations are done to the lowest, i.e., the fourth, order in the tunneling coupling and we find a suppression of the supercurrent due to the combined effect of the Coulomb interaction and the coupling to environmental degrees of freedom. Both analytic and numerical results are presented.
description: 11 pages, 6 figures, to appear in Phys. Rev. B; v3: several misprints corrected - in particular, sign inconsistencies throughout the paper should be fixed
Cis-element absolutely required for HIV-I pathogenesis and purification of its trans-acting factor RBF-2
Creators: name: Establo-Ferrero, Mario Clemente
Publisher: name: University of British Columbia
Year: 2009

description: HIVs are classified into types 1 or 2, groups, subtypes, and specific isolates. They infect CD4+ T-lymphocytes and monocyte/ macrophages. Infection and destruction of CD4+ T-lymphocytes occurs at the pace of billions per day. This massive HIV and CD4+ T-lymphocyte turnover, combined with mutation rate, results in extensive HIV sequence polymorphism. After an average of 11 years, CD4 decline from unbalanced turnover, leads to AIDS and inexorably death. In this thesis I first determined that HIV-1 in Vancouver are of envelope and LTR group M, subtype B. I then extensively investigated the LTR. The LTR contains sequences responsible for RNA pol II recognition and transcription of the HIV-1 genes. I first derived 476 LTR sequences from patients at all stages of HIV-1 infection. I found a surprising number of point and length polymorphisms, predicted to impair binding to targets for dogmatically entrenched transcription factors deemed essential to HIV-1. Some are novel, others have previously been described. I further investigated the function for some LTR variants. I found a wide range of transcription activities, and correlate some to specific sequence polymorphisms. I found no obvious correlation with disease stage for any polymorphism. A -121 position polymorphism, that I termed the Most Frequent Naturally occurring Length Polymorphism (MFNLP), was further investigated. MFNLPs occurred in 38% of patients I sampled. I found no phenotype for MFNLP bearing LTRs. Importantly, I first propose and then prove that MFNLPs all harbor binding sites for the recently characterized transcription factor RBF-2, known to bind the HIV-1 LTR. Thus the MFNLP duplicates an RBF-2 site. Although none of the postulated transcription factor binding sites of the HIV-1 LTR escapes mutation in vivo, only an RBF-2 site is invariably compensated by co-occurrence of it's duplication. Because of MFNLPs, I found an RBF-2 target to be the most conserved site of naturally occurring HIV-1 LTRs. Using MFNLP deleted isogenic mutants, I found a repressive phenotype for the MFNLPs, but only in cells with detectable levels of RBF-2. I further describe the biochemical purification of RBF-2. Analysis of oligo-affinity purified RBF-2 suggests it is a novel complex. All LTRs I have examined, that are derived from patients that progress towards AIDS, have the ability to bind RBF-2. Assuming the current view that viral turnover is itself pathogenic, then by extension, I conclude that the RBF-2 cis-acting element, encompassed in MFNLPs, is required for HIV-1 pathogenesis in vivo. [Scientific formulae used in this abstract could not be reproduced.]
Chiapas 'Aa Tapa / Viaje a Chiapas / Trip to Chiapas
Creators: name: Meza Calles, Yolanda
name: Fernández Guerrero, José Armando
Publisher: name: California Language Archive, University of California, Berkeley
Year: 2021
Subjects: subject: dih

description: 4 WAV and 1 EAF file.
----------
En esta narración, Yolanda Meza Calles platica de su viaje a Chiapas para una conferencia de resistencia y solidaridad indígena.
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In this narrative, Yolanda Meza Calles talks about her trip to Chiapas for a conference about indigenous resistance and solidarity
A mesoscopic approach for multi-phase flows in nano-corrugated channels
Creators: name: Benzi, R.
name: Biferale, L.
name: Sbragaglia, M.
name: Succi, S.
name: Toschi, F.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Cellular Automata and Lattice Gases (nlin.CG)
subject: Materials Science (cond-mat.mtrl-sci)
subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences

description: An approach based on a lattice version of the Boltzmann kinetic equation for describing multi-phase flows in nano- and micro-corrugated devices is proposed. We specialize it to describe the wetting/dewetting transition of fluids in presence of nanoscopic grooves etched on the boundaries. This approach permits to retain the essential supra-molecular details of fluid-solid interactions without surrendering -actually boosting- the computational efficiency of continuum methods. The mesoscopic method is first validated quantitatively against Molecular Dynamics (MD) results of Cottin-Bizonne et al. [Nature Mater. 2, 237 (2003)] and then applied to more complex situations which are hardly accessible to MD simulations. The resulting analysis confirms that surface roughness and capillary effects may conspire to promote a counter-intuitive but significant reduction of the flow drag with substantial enhancement in the mass flow rates and slip-lengths in the micrometric range for highly hydrophobic surfaces.
Is HBT really puzzling?
Creators: name: Pratt, Scott
name: Schindel, Daniel
Publisher: name: arXiv
Year: 2005
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: Two-particle correlations from RHIC have provided a surprising snapshot of the final state at RHIC. In this talk I discuss the nature of the HBT puzzle and attempt to delineate several factors which might ultimately resolve the issue.
description: Proceedings for WPCF, Kromeriz, Czech Republic, August 2005
Additional file 8 of seqQscorer: automated quality control of next-generation sequencing data using machine learning
Creators: name: Albrecht, Steffen
name: Sprang, Maximilian
name: Andrade-Navarro, Miguel A.
name: Jean-Fred Fontaine
Publisher: name: figshare
Year: 2021
Subjects: subject: Statistics
subject: FOS: Mathematics
subject: Artificial Intelligence and Image Processing
subject: FOS: Computer and information sciences

description: Additional file 8. Review history.
The calm after the storm: XMM-Newton observation of SGR 1806-20 two months after the Giant Flare of 2004 December 27
Creators: name: Tiengo, A.
name: Esposito, P.
name: Mereghetti, S.
name: Rea, N.
name: Stella, L.
name: Israel, G. L.
name: Turolla, R.
name: Zane, S.
Publisher: name: arXiv
Year: 2005
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: XMM-Newton observed the soft gamma repeater SGR 1806-20 about two months after its 2004 December 27 giant flare. A comparison with the previous observations taken with the same instrument in 2003-2004 shows that the pulsed fraction and the spin-down rate have significantly decreased and that the spectrum slightly softened. These changes may indicate a global reconfiguration of the neutron star magnetosphere. The spectral analysis confirms that the presence of a blackbody component in addition to the power-law is required. Since this additional component is consistent with being constant with respect to the earlier observations, we explore the possibility of describing the long-term spectral evolution as only due to the power-law variations. In this case, the slope of the power-law does not significantly change and the spectral softening following the giant flare is caused by the increase of the relative contribution of the blackbody over the power-law component.
description: 5 pages, 2 figures, accepted for publication in A&A Letters
Additional file 3 of A mixed-methods survey to explore issues with virtual consultations for musculoskeletal care during the COVID-19 pandemic
Creators: name: Gilbert, Anthony W
name: Booth, Gregory
name: Betts, Tony
name: Goldberg, Andy
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Pharmacology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 3.
Increasing the dimension of the maximal pure coherent subspace of a state via incoherent operations
Creators: name: Liu, C. L.
name: Zhou, D. L.
Publisher: name: arXiv
Year: 2020
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Quantum states transformation under free operations plays a central role in the resource theory of coherence. In this paper, we investigate the transformation from a mixed coherent state into a pure one by using both incoherent operations and stochastic incoherent operations. We show that contrary to the strictly incoherent operations and the stochastic strictly incoherent operations, both the incoherent operations and the stochastic incoherent operations can increase the dimension of the maximal pure coherent subspace of a state. This means that the incoherent operations are generally stronger than the strictly incoherent operations when we want to transform a mixed coherent state into a pure coherent one. Our findings can also be interpreted as confirming the ability of incoherent operations to enhance the coherence of mixed states relative to certain coherence monotones under strictly incoherent operations.
description: 7 pages
Additional file 1 of Cross-sectional survey of depressive symptoms and suicide-related ideation at a Japanese national university during the COVID-19 stay-home order
Creators: name: Nomura, Kyoko
name: Minamizono, Sachiko
name: Maeda, Eri
name: Kim, Roseline
name: Toyoto Iwata
name: Hirayama, Junko
name: Ono, Kyoichi
name: Fushimi, Masahito
name: Goto, Takeshi
name: Mishima, Kazuo
name: Yamamoto, Fumio
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1:. sTable 1. Factors associated with suicide-related ideation.
Spontaneous Z2 Symmetry Breaking in the Orbifold Daughter of N=1 Super Yang-Mills Theory, Fractional Domain Walls and Vacuum Structure
Creators: name: Armoni, A.
name: Gorsky, A.
name: Shifman, M.
Publisher: name: arXiv
Year: 2005
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We discuss the fate of the Z2 symmetry and the vacuum structure in an SU(N)xSU(N) gauge theory with one bifundamental Dirac fermion. This theory can be obtained from SU(2N) supersymmetric Yang--Mills (SYM) theory by virtue of Z2 orbifolding. We analyze dynamics of domain walls and argue that the Z2 symmetry is spontaneously broken. Since unbroken Z2 is a necessary condition for nonperturbative planar equivalence we conclude that the orbifold daughter is nonperturbatively nonequivalent to its supersymmetric parent. En route, our investigation reveals the existence of fractional domain walls, similar to fractional D-branes of string theory on orbifolds. We conjecture on the fate of these domain walls in the true solution of the Z2-broken orbifold theory. We also comment on relation with nonsupersymmetric string theories and closed-string tachyon condensation.
description: 37 pages, 7 figures. v2: various significant changes; revisions explained in the introduction. Final version to appear in Phys.Rev.D
Webinar: Discover the DTE Infrastructure Modules
Creators: name: Vrbanec, Dijana
name: Ciangottini, Diego
name: Spiga, Daniele
Publisher: name: Zenodo
Year: 2025

description: https://youtu.be/Is3BvtXyYN0

interTwin co-designs and implements the prototype of an interdisciplinary Digital Twin Engine (DTE), an open source platform that provides generic and tailored software components for modelling and simulation to develop application-specific Digital Twins (DTs).

The DTE Infrastructure addresses the challenge of unifying computing resources and data management across diverse scientific communities, while remaining flexible enough to support specialized requirements. At a broad level, the platform is organized around three main pillars—Federated Computation, Federated Data Management, and Intelligent Resource Orchestration— forming a cohesive ecosystem that can accommodate a wide range of DT applications.

Register now and learn more about interTwin developments and testbeds in the area of Federated Computing and Data Management, how they are integrated by the DTE Core components, and learn from User communities piloting the DTE.

In this webinar, you will learn about:: 

The Development of an Open Source Digital Twin Engine (DTE): The webinar will discuss the creation of the interTwin interdisciplinary Digital Twin Engine, an open-source platform designed to provide generic and tailored software components for modeling and simulation, enabling the development of application-specific Digital Twins.

The three Main Pillars of the interTwin DTE Infrastructure: The platform is structured around three key pillars: Federated Computation, Federated Data Management, and Intelligent Resource Orchestration. These pillars form an ecosystem that supports a wide range of Digital Twin applications.

Focus on Federated Computing and Data Management: The webinar will highlight the developments and testbeds in the areas of Federated Computing and Data Management, including how these components are integrated and utilized by core components and user communities piloting the DTE.

Agenda:

Intro to the interTwin project and the DTE infrastructure – Daniele Spiga (INFN)

Federated Computing  with interLink – Diego Ciangottini  (INFN)

Federated  Data Management components  – Dijana Vrbanec (DESY)

Q/A – 10 min
Precise Half-Life Values for Two-Neutrino Double-$β$ Decay: 2020 review
Creators: name: Barabash, Alexander
Publisher: name: arXiv
Year: 2020
Subjects: subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: All existing positive results on two-neutrino double beta decay and two-neutrino double electron capture in different nuclei have been analyzed. Weighted average and recommended half-life values for $^{48}$Ca, $^{76}$Ge, $^{82}$Se, $^{96}$Zr, $^{100}$Mo, $^{100}$Mo - $^{100}$Ru ($0^+_1$), $^{116}$Cd, $^{128}$Te, $^{130}$Te, $^{136}$Xe, $^{150}$Nd, $^{150}$Nd - $^{150}$Sm ($0^+_1$), $^{238}$U, $^{78}$Kr, $^{124}$Xe and $^{130}$Ba have been obtained. Given the measured half-life values, effective nuclear matrix elements for all these transitions were calculated.
description: 17 pages. arXiv admin note: text overlap with arXiv:1501.05133
Additional file 1 of Prevalence and clinical, social, and health care predictors of miscarriage
Creators: name: Strumpf, Erin
name: Ariella Lang
name: Austin, Nichole
name: Derksen, Shelley A.
name: Bolton, James M.
name: Brownell, Marni D.
name: Chateau, Dan
name: Gregory, Patricia
name: Heaman, Maureen I.
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 1. Supplementary data and sample details (text description).
Additional file 2 of Prevalence and clinical, social, and health care predictors of miscarriage
Creators: name: Strumpf, Erin
name: Ariella Lang
name: Austin, Nichole
name: Derksen, Shelley A.
name: Bolton, James M.
name: Brownell, Marni D.
name: Chateau, Dan
name: Gregory, Patricia
name: Heaman, Maureen I.
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 2. Identified losses, by data source (table).
A concentrated capacity model for diffusion-advection: advection localized to a moving curve
Creators: name: Klaus, Colin
Publisher: name: arXiv
Year: 2020
Subjects: subject: Analysis of PDEs (math.AP)
subject: FOS: Mathematics
subject: 35B99, 35R06, 35Q92 (Primary) 92E99 (Secondary)

description: In this work I show how a diffusion-advection equation in three space-dimensions may have its advection term weakly limited to a velocity field localized to a moving curve. This is rigorously accomplished through the technique of concentrated capacity, and the form of the concentrated capacity limit along with small time existence of solutions is determined. This problem is motivated by mathematical biology and the study of proteins in solvent where the latter is modeled as a diffusing quantity and the protein is taken to be a 1d object which advects the solvent by contact and its own motion. This work introduces a novel PDE's framework for that interaction.
description: 23 pages
Statistical analysis of discrete time series with application to the analysis of workers' compensation claims data
Creators: name: Freeland, R. Keith
Publisher: name: University of British Columbia
Year: 2009

description: This thesis examines the statistical properties of the Poisson AR(1) model of Al-Osh and Alzaid (1987) and McKenzie (1988). The analysis includes forecasting, estimation, testing for independence and specification and the addition of regressors to the model. The Poisson AR(1) model is an infinite server queue, and as such is well suited for modeling short-term disability claimants who are waiting to recover from an injury or illness. One of the goals of the thesis is to develop statistical methods for analyzing series of monthly counts of claimants collecting short-term disability benefits from the Workers' Compensation Board (WCB) of British Columbia. We consider four types of forecasts, which are the k-step ahead conditional mean, median, mode and distribution. For low count series the k-step ahead conditional distribution is practical and much more informative than the other forecasts. We consider three estimation methods: conditional least squares (CLS), generalized least squares (GLS) and maximum likelihood (ML). In the case of CLS estimation we find an analytic expression for the information and in the GLS case we find an approximation for the information. We find neat expressions for the score function and the observed Fisher information matrix. The score expressions leads to new definitions of residuals. Special care is taken to test for independence since the test is on the boundary of the parameter space. The score test is asymptotically equivalent to testing whether the CLS estimate of the correlation coefficient is zero. Further we define a Wald and likelihood ratio test. Then we use the general specification test of McCabe and Leybourne (1996) to test whether the model is sufficient to explain the variation found in the data. Next we add regressors to the model and update our earlier forecasting, estimation and testing results. We also show the model is identifiable. We conclude with a detailed application to monthly WCB claims counts. The preliminary analysis includes plots of the series, autocorrelation function and partial autocorrelation function. Model selection is based on the preliminary analysis, t-tests for the parameters, the general specification test and residuals. We also include forecasts for the first six months of 1995.