cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
UNDERUTILIZATION OF SMART PUMP SAFETY FEATURES
Creators: name: Pearce, Shauna Kathleen
Publisher: name: Zenodo
Year: 2019

description: The purpose of this quality improvement project was to improve adherence with the use of the safety features of the smart pumps in the intensive care unit (ICU) of a Los Angeles Hospital in order to decrease the risk of medication errors. The specific aims were to identify nurses’ perceptions of the barriers to adherence with the safety features of the smart pump and to implement processes to increase compliance. Barriers were identified by asking the ICU nurses to complete a web-based questionnaire. Based on the responses and information found in scholarly literature, improvements were determined and implemented. Overall, there was a 0.7% increase in adherence which was shown to be statistically significant (p = 0.002). Another key finding was that the night shift nurses improved 1.3%, also statistically significant (p = 0.00). Continuous improvement for this process is needed to minimize the risk of potentially catastrophic medication errors. A strong collaboration between pharmacy, nursing, and the pump manufacturer may eliminate adherence issues.
Notes on Liouville Theory at c<=1
Creators: name: McElgin, Will
Publisher: name: arXiv
Year: 2007
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The continuation of the Liouville conformal field theory to c<=1 is considered. The viability of an interpretation involving a timelike boson which is the conformal factor for two-dimensional asymptotically de Sitter geometries is examined. The conformal bootstrap leads to a three-point function with a unique analytic factor which is the same as that which appears along with the fusion coefficients in the minimal models. A corresponding non-analytic factor produces a well-defined metric on fields only when the central charge is restricted to those of the topological minimal models, and when the conformal dimensions satisfy h>(c-1)/24. However, the theories considered here have a continuous spectrum which excludes the degenerate representations appearing in the minimal models. The c=1 theory has been investigated previously using similar techniques, and is identical to a non-rational CFT which arises as a limit of unitary minimal models. When coupled to unitary matter fields, the non-unitary theories with c<=-2 produce string amplitudes which are similar to those of the minimal string.
description: 31 pages, 4 figures
Additional file 13 of Benchmarking different approaches for Norovirus genome assembly in metagenome samples
Creators: name: Fuentes-Trillo, Azahara
name: Monzó, Carolina
name: Manzano, Iris
name: Santiso-Bellón, Cristina
name: Andrade, Juliana da Silva Ribeiro de
name: Gozalbo-Rovira, Roberto
name: García-García, Ana-Bárbara
name: Rodríguez-Díaz, Jesús
name: Chaves, Felipe Javier
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 13. Contig alignments of sample F against the closest reference from GenBank.
Unstable g-modes in Proto-Neutron Stars
Creators: name: Ferrari, V.
name: Gualtieri, L.
name: Pons, J. A.
Publisher: name: arXiv
Year: 2007
Subjects: subject: Astrophysics (astro-ph)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: In this article we study the possibility that, due to non-linear couplings, unstable g-modes associated to convective motions excite stable oscillating g-modes. This problem is of particular interest, since gravitational waves emitted by a newly born proto-neutron star pulsating in its stable g-modes would be in the bandwidth of VIRGO and LIGO. Our results indicate that nonlinear saturation of unstable modes occurs at relatively low amplitudes, and therefore, even if there exists a coupling between stable and unstable modes, it does not seem to be sufficiently effective to explain, alone, the excitation of the oscillating g-modes found in hydrodynamical simulations.
description: 10 pages, 3 figures, to appear on Class. Quant. Grav
Detecting Errors in Spreadsheets
Creators: name: Ayalew, Yirsaw
name: Clermont, Markus
name: Mittermeir, Roland T.
Publisher: name: arXiv
Year: 2008
Subjects: subject: Software Engineering (cs.SE)
subject: FOS: Computer and information sciences
subject: D.1.7, D.2.1, D.2.11, D.3.2, D.3.3, H.4.1, K.6.4, K.8.1

description: The paper presents two complementary strategies for identifying errors in spreadsheet programs. The strategies presented are grounded on the assumption that spreadsheets are software, albeit of a different nature than conventional procedural software. Correspondingly, strategies for identifying errors have to take into account the inherent properties of spreadsheets as much as they have to recognize that the conceptual models of 'spreadsheet programmers' differ from the conceptual models of conventional programmers. Nevertheless, nobody can and will write a spreadsheet, without having such a conceptual model in mind, be it of numeric nature or be it of geometrical nature focused on some layout.
description: 12 Pages, 5 Figures; ISBN: 1 86166 158 4
AN EVIDENCE-BASED PALLIATIVE CARE EDUCATIONAL WORKSHOP
Creators: name: Phan, Ricky
Publisher: name: Zenodo
Year: 2019

description: Palliative care (PC) is not only a philosophy but also specialized care designed to improve the quality of life for patients during an acute or a chronic disease process, or a life-threatening illness (National Quality Forum, 2016). Although large medical centers educate nurses about PC, few community hospitals provide education about the need for palliation. Nurses without PC training and roleplay experience are not always confident in initiating a goals-of-care (GOC) conversation and the desire for palliative care with patients and their caregivers. The purpose of this doctoral project was to develop an evidence-based educational workshop to teach critical care nurses in community hospitals about PC, how to conduct the GOC conversation using the Serious Illness Conversation Guide (SICG), and the commonly used PC screening tools. There were two major steps in this project. The first step was to develop the workshop with an extensive literature review about palliative care. The second step was to evaluate the workshop by seeking PC expert reviewers and from piloting the workshop. In the workshop piloting, four critical care nurses from the CSUF Doctor of Nursing Practice Nurse Anesthesia program were recruited. The workshop content was revised based on suggestions from the experts and the critical care nurses who attended the workshop. Participants stated that their confidence level in initiating GOC conversations was improved after the workshop and that the iv content presented was important to their practice. All of the reviewers agreed that the blending of the lecture, interactive roleplay, and formative evaluation into the workshop was excellent. This project resulted in the development of such an evidence-based PC educational workshop. The workshop was designed to close the gap in bringing palliative care education and GOC conversation training to critical care nurses in community hospitals. The next step would be to further evaluate the workshop before dissemination.
Catocala lineella Grote 1872
Creators: name: Gall, Lawrence
name: Hawks, David
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Noctuidae
Catocala
Catocala lineella

description: Catocala lineella syn. nerissa H. Edwards, syn. rev. Fig. 29 (lectotype) Catocala nerissa H. Edwards, 1880: 61 Catocala amica form nerissa; Barnes and McDunnough 1918: 45 Catocala amica syn. nerissa; McDunnough 1938: 118 Catocala amica syn. nerissa; Franclemont and Todd 1983: 129 Type material. Catocala nerissa: the original description states “Type, coll. B. Neumoegen.” At the AMNH is a nerissa labeled “Type” and at the USNM is another nerissa labeled “Type 2.” The AMNH type is a specimen of C. lineella Grote, 1872 and the USNM type is a specimen of C. jair Strecker, 1897. The AMNH male is designated as lectotype to clarify application of the name nerissa. The name nerissa thereby attaches to C. lineella, which itself was reinstated to species status by Gall (1990). The lectotype bears the labels “S. West / Texas.”, “No. 11784 / Collection / Hy. Edwards.”, “ Cat. amica / var. nerissa. / Type Hy. Edw.” Type Locality: hereby restricted to S[outh] West Texas, [USA] on the basis of the lectotype labels.
description: Published as part of Gall, Lawrence & Hawks, David, 2010, Systematics of moths in the genus Catocala (Lepidoptera, Erebidae) IV. Nomenclatorial stabilization of the Nearctic fauna, with a revised synonymic check list, pp. 37-83 in ZooKeys 39 (39) on page 63, DOI: 10.3897/zookeys.39.425, http://zenodo.org/record/576632
description: {"references": ["Barnes W, McDunnough J (1918) Illustrations of the North American species of the genus Catocala. Memoirs of the American Museum of Natural History 3: 1 - 47.", "McDunnough JH (1938) Check List of the Lepidoptera of Canada and the United States of America. Part I. Macrolepidoptera. Memoirs of the Southern California Academy of Sciences 1: 1 - 275.", "Franclemont JG, Todd EL (1983) Noctuidae. In: Hodges RW (Ed) Check list of the Lepidoptera of America north of Mexico. University Press, Cambidge, 120 - 159."]}
Prime power variations of higher $Lie_n$ modules
Creators: name: Sundaram, Sheila
Publisher: name: arXiv
Year: 2021
Subjects: subject: Representation Theory (math.RT)
subject: Combinatorics (math.CO)
subject: FOS: Mathematics
subject: 05E05 (primary) 20C30 (secondary)

description: We define, for each subset $S$ of the set $\mathcal{P}$ of primes, an $S_n$-module $Lie_n^S$ with interesting properties. $Lie_n^\emptyset$ is the well-known representation $Lie_n$ of $S_n$ afforded by the free Lie algebra, while $Lie_n^\mathcal{P}$ is the module $C\!onj_n$ of the conjugacy action of $S_n$ on $n$-cycles. For arbitrary $S$ the module $Lie_n^{S}$ interpolates between the representations $Lie_n$ and $C\!onj_n.$ We consider the symmetric and exterior powers of $Lie_n^S.$ These are the analogues of the higher Lie modules of Thrall. We show that the Frobenius characteristic of these higher $Lie_n^S$ modules can be elegantly expressed as a multiplicity-free sum of power sums. In particular this establishes the Schur positivity of new classes of sums of power sums. More generally, for each nonempty subset $T$ of positive integers we define a sequence of symmetric functions $f_n^T$ of homogeneous degree $n.$ We show that the series $\sum_{λ, λ_i\in T} p_λ$ can be expressed as symmetrised powers of the functions $f_n^T$, analogous to the higher Lie modules first defined by Thrall. This in turn allows us to unify previous results on the Schur positivity of multiplicity-free sums of power sums, as well as investigate new ones. We also uncover some curious plethystic relationships between $f_n^T$, the conjugacy action and the Lie representation.
description: 21 pages. Parts of this paper are included in arXiv:1803.09368. To appear in J. Combinatorial Theory (A) (accepted June 2021)
Additional file 14 of Benchmarking different approaches for Norovirus genome assembly in metagenome samples
Creators: name: Fuentes-Trillo, Azahara
name: Monzó, Carolina
name: Manzano, Iris
name: Santiso-Bellón, Cristina
name: Andrade, Juliana da Silva Ribeiro de
name: Gozalbo-Rovira, Roberto
name: García-García, Ana-Bárbara
name: Rodríguez-Díaz, Jesús
name: Chaves, Felipe Javier
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 14. Contig alignments of sample G against the closest reference from GenBank.
CE$ν$NS as a probe of flavored generalized neutrino interactions
Creators: name: Flores, L. J.
name: Nath, Newton
name: Peinado, Eduardo
Publisher: name: arXiv
Year: 2021
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We examine the potential to probe generalized neutrino interactions (GNI), exotic effective couplings due to new physics interactions beyond the Standard Model, in the coherent-elastic neutrino-nucleus scattering experiments in light of the latest COHERENT-CsI, and -LAr data. Our analysis focuses on scalar, vector and tensor flavored-GNI parameters. A combined analysis has been made to constrain these exotic couplings for the CsI and LAr detector. We further add the projected forthcoming reactor-based Scintillating Bubble Chamber detector to examine these couplings. It has been observed that the addition of reactor data strongly constrained electron flavor GNI.
description: Now published in Physical Review D
Additional file 15 of Benchmarking different approaches for Norovirus genome assembly in metagenome samples
Creators: name: Fuentes-Trillo, Azahara
name: Monzó, Carolina
name: Manzano, Iris
name: Santiso-Bellón, Cristina
name: Andrade, Juliana da Silva Ribeiro de
name: Gozalbo-Rovira, Roberto
name: García-García, Ana-Bárbara
name: Rodríguez-Díaz, Jesús
name: Chaves, Felipe Javier
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 15. Contig alignments of sample H against the closest reference from GenBank.
Observation of enhanced X-ray emission from the CTTS AA Tau during a transit of an accretion funnel
Creators: name: Grosso, Nicolas
name: Bouvier, Jérôme
name: Montmerle, Thierry
name: Fernández, Matilde
name: Grankin, Konstantin
name: Osorio, Maria Rosa Zapatero
Publisher: name: arXiv
Year: 2007
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: AA Tau was observed for about 5h per XMM orbit (2 days) over 8 successive orbits, which covers two optical eclipse periods (8.2 days). The XMM optical/UV monitor simultaneously provided UV photometry with a ~15 min sampling rate. Some V-band photometry was also obtained from the ground during this period in order to determine the dates of the eclipses. Two X-ray and UV measurements were secured close to the center of the eclipse. The UV flux is the highest just before the eclipse starts and the lowest towards the end of it. We model the UV flux variations with a weekly modulation (inner disk eclipse), plus a daily modulation, which suggests a non-steady accretion. No eclipses are detected in X-rays. For one measurement, the X-ray count rate was nearly 50 times stronger than the minimum observed level, and the plasma temperature reached 60 MK, i.e., a factor of 2-3 higher than in the other observations. This X-ray event, observed close to the center of the optical eclipse, is interpreted as an X-ray flare. We identify the variable column density with the low-density accretion funnel flows blanketing the magnetosphere. The lack of X-ray eclipses indicates that X-ray emitting regions are located at high latitudes. Furthermore, the occurrence of a strong X-ray flare near the center of the optical eclipse suggests that the magnetically active areas are closely associated with the base of the high-density accretion funnel flow. We speculate that the impact of this free falling accretion flow onto the strong magnetic field of the stellar corona may boost the X-ray emission (abridged).
description: 17 pages and 9 Figures. Accepted by A&A
Catocala semirelicta subsp. semirelicta ssp. semirelicta, syn. n.
Creators: name: Gall, Lawrence
name: Hawks, David
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Noctuidae
Catocala
Catocala semirelicta
Catocala semirelicta ssp. semirelicta

description: Catocala semirelicta ssp. semirelicta syn. nevadensis Beutenmüller, syn. n. Fig. 30 (lectotype) Catocala nevadensis Beutenmüller, 1907: 935 Catocala nevadensis; Barnes and McDunnough 1918: 28 Catocala nevadensis; McDunnough 1938: 116 Catocala nevadensis; Franclemont and Todd 1983: 129 Type material. Catocala nevadensis: the original description states “Th ree males and five females, American Museum of Natural History.” Two types are at the AMNH, and a female is designated as lectotype to clarify application of the name nevadensis. The lectotype bears the labels “27”, “Type / No. / A.M.N.H.”, “nevadensis from / which ♀ plate / was drawn / for mono.”, “ Catocala / nevadensis / Beut.” Th e lectotype of C. nevadensis is a specimen of the widespread and morphologically variable C. semirelicta Grote, 1874 with strong black markings on the forewing. Such specimens occur more commonly in the western USA, but have no definable geographic basis. Type Locality: hereby restricted to Lake Tahoe, Sierra Nevada [Mountains], California, [USA] on the basis of the lectotype labels.
description: Published as part of Gall, Lawrence & Hawks, David, 2010, Systematics of moths in the genus Catocala (Lepidoptera, Erebidae) IV. Nomenclatorial stabilization of the Nearctic fauna, with a revised synonymic check list, pp. 37-83 in ZooKeys 39 (39) on page 64, DOI: 10.3897/zookeys.39.425, http://zenodo.org/record/576632
description: {"references": ["Beutenmuller W (1907) New forms of Catocala. Bulletin of the American Museum of Natural History 23: 935 - 940.", "Barnes W, McDunnough J (1918) Illustrations of the North American species of the genus Catocala. Memoirs of the American Museum of Natural History 3: 1 - 47.", "McDunnough JH (1938) Check List of the Lepidoptera of Canada and the United States of America. Part I. Macrolepidoptera. Memoirs of the Southern California Academy of Sciences 1: 1 - 275.", "Franclemont JG, Todd EL (1983) Noctuidae. In: Hodges RW (Ed) Check list of the Lepidoptera of America north of Mexico. University Press, Cambidge, 120 - 159."]}
A Spreadsheet Auditing Tool Evaluated in an Industrial Context
Creators: name: Clermont, Markus
name: Hanin, Christian
name: Mittermeir, Roland T.
Publisher: name: arXiv
Year: 2008
Subjects: subject: Human-Computer Interaction (cs.HC)
subject: FOS: Computer and information sciences
subject: D.1.7; D.2.1; D.2.11; D.3.2; D.3.3; H.4.1; K.6.4; K.8.1

description: Amongst the large number of write-and-throw-away spreadsheets developed for one-time use there is a rather neglected proportion of spreadsheets that are huge, periodically used, and submitted to regular update-cycles like any conventionally evolving valuable legacy application software. However, due to the very nature of spreadsheets, their evolution is particularly tricky and therefore error-prone. In our strive to develop tools and methodologies to improve spreadsheet quality, we analysed consolidation spreadsheets of an internationally operating company for the errors they contain. The paper presents the results of the field audit, involving 78 spreadsheets with 60,446 non-empty cells. As a by-product, the study performed was also to validate our analysis tools in an industrial context. The evaluated auditing tool offers the auditor a new view on the formula structure of the spreadsheet by grouping similar formulas into equivalence classes. Our auditing approach defines three similarity criteria between formulae, namely copy, logical and structural equivalence. To improve the visualization of large spreadsheets, equivalences and data dependencies are displayed in separated windows that are interlinked with the spreadsheet. The auditing approach helps to find irregularities in the geometrical pattern of similar formulas.
description: 12 Pages, 2 Figures, 4 Tables
Un ejemplo de matriz de metodología de investigación
Creators: name: Suing, Abel
Publisher: name: Zenodo
Year: 2011
Subjects: Derecho
Comunicación
Metodología
Investigación
Instrumentos
Indicadores

description: Ejemplo de una matriz de investigación. El tema a investigar es la propuesta del Consejo de Comunicación de Ecuador, órgano que se incluye en el Proyecto de Ley Orgánica de Comunicación que actualmente espera el segundo debate en la Asamblea Nacional de Ecuador.
A Novel Model for Vulnerability Analysis through Enhanced Directed Graphs and Quantitative Metrics
Creators: name: Longueira-Romero, Ángel
name: Iglesias, Rosa
name: Flores, Jose Luis
name: Garitano, Iñaki
Publisher: name: arXiv
Year: 2021
Subjects: subject: Cryptography and Security (cs.CR)
subject: FOS: Computer and information sciences

description: Industrial components are of high importance because they control critical infrastructures that form the lifeline of modern societies. However, the rapid evolution of industrial components, together with the new paradigm of Industry 4.0, and the new connectivity features that will be introduced by the 5G technology, all increase the likelihood of security incidents. These incidents are caused by the vulnerabilities present in these devices. In addition, although international standards define tasks to assess vulnerabilities, they do not specify any particular method. Having a secure design is important, but is also complex, costly, and an extra factor to manage during the lifespan of the device. This paper presents a model to analyze the known vulnerabilities of industrial components over time. The proposed model is based on two main elements: a directed graph representation of the internal structure of the component, and a set of quantitative metrics that are based on international security standards; such as, the Common Vulnerability Scoring System (CVSS). This model is applied throughout the entire lifespan of a device to track vulnerabilities, identify new requirements, root causes, and test cases. The proposed model also helps to prioritize patching activities. To test its potential, the proposed model is applied to the OpenPLC project. The results show that most of the root causes of these vulnerabilities are related to memory buffer operations and are concentrated in the \textit{libssl} library. Consequently, new requirements and test cases were generated from the obtained data.
description: 26 pages, 5 figures, 12 tables
Catocala grynea
Creators: name: Gall, Lawrence
name: Hawks, David
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Noctuidae
Catocala
Catocala grynea

description: Catocala grynea syn. nuptula Walker Fig. 31 (lectotype) Catocala nuptula Walker, [1858]: 1205 Catocala grynea syn. nuptula; Barnes and McDunnough 1918: 40 Catocala grynea syn. nuptula; McDunnough 1938: 118 Catocala grynea syn. nuptula; Franclemont and Todd 1983: 129 Type material. Catocala nuptula: the original description states “a,b. North America. From Mr. Milne’s collection.” A female type is at the BMNH, and is designated as lectotype to clarify application of the name nuptula. Th e lectotype bears the labels “N. America / 39.-6.-19. / 1595”, “N. America / 39.- 6.-19.-1595 ”, “ Catocala / nuptula / Walk. Type.” Type Locality: North America.
description: Published as part of Gall, Lawrence & Hawks, David, 2010, Systematics of moths in the genus Catocala (Lepidoptera, Erebidae) IV. Nomenclatorial stabilization of the Nearctic fauna, with a revised synonymic check list, pp. 37-83 in ZooKeys 39 (39) on page 64, DOI: 10.3897/zookeys.39.425, http://zenodo.org/record/576632
description: {"references": ["Barnes W, McDunnough J (1918) Illustrations of the North American species of the genus Catocala. Memoirs of the American Museum of Natural History 3: 1 - 47.", "McDunnough JH (1938) Check List of the Lepidoptera of Canada and the United States of America. Part I. Macrolepidoptera. Memoirs of the Southern California Academy of Sciences 1: 1 - 275.", "Franclemont JG, Todd EL (1983) Noctuidae. In: Hodges RW (Ed) Check list of the Lepidoptera of America north of Mexico. University Press, Cambidge, 120 - 159."]}
Information Behavior am Studiengang "Wissenschaft – Medien – Kommunikation" (KIT Karlsruhe) untersucht nach Sonnenwalds Methode der Information Horizons
Creators: name: Haase, Jana
Publisher: name: Zenodo
Year: 2019
Subjects: information science
information behavior
Karlsruher Institut für Technologie
Wissenschaft - Medien - Kommunikation
Information Horizons
Diane H . Sonnenwald

description: Masterthesis

Hochschule Darmstadt, Dept. Media

course of studies: Informationswissenschaft

https://sis.h-da.de/
CANGAROO-III Search for Gamma Rays from Centaurus A and the $ω$ Centauri Region
Creators: name: Kabuki, S.
name: Enomoto, R.
name: collaboration, CANGAROO-III
Publisher: name: arXiv
Year: 2007
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We have observed the giant radio galaxy Centaurus A and the globular cluster $ω$ Centauri in the TeV energy region using the CANGAROO-III stereoscopic system. The system has been in operation since 2004 withan array of four Imaging Atmospheric Cherenkov Telescopes (IACT) with $\sim$100-m spacings. The observations were carried out in March and April 2004. In total, approximately 10 hours data were obtained for each target.No statistically significant gamma-ray signal has been found above 420 GeV over a wide angular region (a one-degree radius from thepointing center) and we derive flux upper limits using all of the field of view.Implications for the total energy of cosmic rays and the density of the cold dark matter are considered.
description: 7 pages, 6 figures, to appear in ApJ, emulateapj.cls
Additional file 1 of Elp1 facilitates RAD51-mediated homologous recombination repair via translational regulation
Creators: name: Chen, Wei-Ting
name: Tseng, Huan-Yi
name: Jiang, Chung-Lin
name: Lee, Chih-Ying
name: Chi, Peter
name: Chen, Liuh-Yow
name: Lo, Kai-Yin
name: Wang, I-Ching
name: Lin, Fu-Jung
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1. Elp1 facilitates RAD51-mediated homologous recombination repair via translational regulation. Figure S1. Schematic of the Elp1 mutant allele. Figure S2. qRT-PCR analysis of the Elp1 mRNA expression by D3 MEFs. Figure S3. Knockout of Elp1 impaired cell cycle. Figure S4. Apoptosis analysis of Ctrl and KO MEFs treated with ETO for 24 h via flow cytometry. Figure S5. Elp1 deficiency impairs homology-directed DNA repair. Figure S6. The ratio of phospho-p53/p53 protein level and the number of RPA foci were not significantly affected in the absence of Elp1. Figure S7. Part of polysome profiling of Ctrl and KO MEFs shown in Fig. 5F. Figure S8. qRT-PCR analysis of Brca2 and Xrcc4 mRNA in polysomal fractions shown in Fig. 5F. Figure S9. Detection of RAD51, GAPDH and ELP1 by Western blot of Ctrl and KO MEFs transfected with vector expressing full-length human RAD51. Figure S10. Normalized abundance values of GAPDH and β-actin among four groups. Figure S11. qRT-PCR analysis of Arid1a, Babam1 and Brcc3 mRNA in Ctrl and KO MEFs and in polysomal fractions shown in Fig. 5F. Table S1. The primer sequences for qRT-PCR. Table S2. Ingenuity disease and function analysis of mapped differentially expressed proteins between KO0 and Ctrl0 cells. Table S3. Ingenuity disease and function analysis of mapped differentially expressed proteins between KO4 and Ctrl4 cells.
Additional file 8 of Benchmarking different approaches for Norovirus genome assembly in metagenome samples
Creators: name: Fuentes-Trillo, Azahara
name: Monzó, Carolina
name: Manzano, Iris
name: Santiso-Bellón, Cristina
name: Andrade, Juliana da Silva Ribeiro de
name: Gozalbo-Rovira, Roberto
name: García-García, Ana-Bárbara
name: Rodríguez-Díaz, Jesús
name: Chaves, Felipe Javier
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 8. Contig alignments of sample A, against the closest reference from GenBank.
Additional file 9 of Benchmarking different approaches for Norovirus genome assembly in metagenome samples
Creators: name: Fuentes-Trillo, Azahara
name: Monzó, Carolina
name: Manzano, Iris
name: Santiso-Bellón, Cristina
name: Andrade, Juliana da Silva Ribeiro de
name: Gozalbo-Rovira, Roberto
name: García-García, Ana-Bárbara
name: Rodríguez-Díaz, Jesús
name: Chaves, Felipe Javier
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 9. Contig alignments of sample B against the closest reference from GenBank.
Metastability of persistent currents in trapped gases of atoms
Creators: name: Karkkainen, K.
name: Christensson, J.
name: Reinisch, G.
name: Kavoulakis, G. M.
name: Reimann, S. M.
Publisher: name: arXiv
Year: 2007
Subjects: subject: Other Condensed Matter (cond-mat.other)
subject: FOS: Physical sciences

description: We examine the conditions that give rise to metastable, persistent currents in a trapped Bose-Einstein condensate. A necessary condition for the stability of persistent currents is that the trapping potential is not a monotonically increasing function of the distance from the trap center. Persistent currents also require that the interatomic interactions are sufficiently strong and repulsive. Finally, any off-center vortex state is shown to be unstable, while a driven gas shows hysteresis.
description: 7 pages, RevTex, 5 figures
Additional file 1 of First report on molecular docking analysis and drug resistance substitutions to approved HCV NS5A and NS5B inhibitors amongst Iranian patients
Creators: name: Hasanshahi, Zahra
name: Hashempour, Ava
name: Ghasabi, Farzane
name: Moayedi, Javad
name: Musavi, Zahra
name: Dehghani, Behzad
name: Sharafi, Heidar
name: Joulaei, Hassan
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Additional file 1. Figs. S1-S12 illustrated the amino acids involved in docking analysis between NS5A and B with NS5 inhibitors including Daclatasvir, Elbasvir, Ledipasvir, and Ombitasvir.
title: Towards Parallel Algorithms for Abstract Dialectical Frameworks
Creators: name: Hofer, Mathias
Publisher: name: TU Wien
Year: 2022
Subjects: subject: Argumentation
subject: Algorithms

description: Abstract Dialectical Frameworks (ADFs) are a natural generalization of Dung-styleargumentation frameworks. They are not restricted to the notion of attack, but alsodeal with supporting, dependent and redundant relations between arguments. Thisgeneralization makes ADFs more expressive at the cost of increased computationalcomplexity. There are some algorithmic advances to tackle this increased complexity,but only little work on parallel algorithms. The goal of this thesis is to illustrate thatparallelization is a viable approach to further improve ADF systems. By looking atmodern multi-core CPUs, we deem parallel algorithms as necessary to fully utilize currentand future hardware developments and thus making ADF systems future-proof.The advances towards parallel algorithms result in a concrete implementation of an ADFsystem. This system is capable of computing common reasoning tasks for many semanticsby choice either sequentially or in parallel. To keep the implementation overhead low andthe system extensible for further semantics, a new algorithmic model is introduced. Thismodel is based on shared conceptual building blocks between semantics. These buildingblocks only have to be implemented once and can then be used by each semantics. Itwas also designed with concurrent execution in mind, since many building blocks can beused by both execution models with only little changes.The thesis also provides some experiments to illustrate the benefits of parallel execution.It also provides technical discussions and insights on problems that may occur whenrunning things in parallel. This then concludes with an overview of possible futuredevelopments of this system to overcome these problems, but also suggestions on howADF systems may be improved in general.
Geometric representation of binary codes and computation of weight enumerators
Creators: name: Rytíř, Pavel
Publisher: name: arXiv
Year: 2008
Subjects: subject: Combinatorics (math.CO)
subject: FOS: Mathematics
subject: 68R05

description: For every linear binary code $C$, we construct a geometric triangular configuration $Δ$ so that the weight enumerator of $C$ is obtained by a simple formula from the weight enumerator of the cycle space of $Δ$. The triangular configuration $Δ$ thus provides a geometric representation of $C$ which carries its weight enumerator. This is the initial step in the suggestion by M. Loebl, to extend the theory of Pfaffian orientations from graphs to general linear binary codes. Then we carry out also the second step by constructing, for every triangular configuration $Δ$, a triangular configuration $Δ'$ and a bijection between the cycle space of $Δ$ and the set of the perfect matchings of $Δ'$.
description: 16 pages, 11 figures, submitted to Advances in Applied Mathematics, v2: major conceptual changes
Additional file 1 of Test-level and Item-level Model Fit Comparison of General vs. Specific Diagnostic Classification Models: A Case of True DCM
Creators: name: Shafipoor, Mahdieh
name: Ravand, Hamdollah
name: Maftoon, Parviz
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Science Policy

description: Additional file 1. Appendices
Additional file 1 of Impaired fasting glucose: a risk factor for atrial fibrillation and heart failure
Creators: name: Lind, Viktor
name: Hammar, Niklas
name: Lundman, Pia
name: Friberg, Leif
name: Talbäck, Mats
name: Walldius, Göran
name: Norhammar, Anna
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: Cancer

description: Additional file 1: Table S1. International Classification of Diseases [ICD] code 8/9/10 diagnoses and Classification of Surgical Procedures NOMESCO (Nordic Medico-Statistical Committee) codes used to define previous cardiovascular disease as exclusion criteria. Table S2. International Classification of Diseases [ICD] code 8/9/10 for diagnoses used to define events. Table S3. International Classification of Diseases [ICD] code 8/9/10 diagnoses and Classification of Surgical Procedures NOMESCO (Nordic Medico-Statistical Committee) codes used to define comorbidities. Table S4. Baseline characteristics of subjects with available BMI in sensitivity analysis. Categorical variables are presented as absolute and relative (percentages) frequencies, continuous variables as median and interquartile range.
The wake of a quark moving through a strongly-coupled $\mathcal N=4$ supersymmetric Yang-Mills plasma
Creators: name: Yaffe, Laurence G.
name: Chesler, Paul M.
Publisher: name: arXiv
Year: 2007
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The energy density wake produced by a heavy quark moving through a strongly coupled N=4 supersymmetric Yang-Mills plasma is computed using gauge/string duality.
description: 4 pages, typos fixed
Ab-initio coupled-cluster calculations of ground and dipole excited states in 8He
Creators: name: Bonaiti, Francesca
name: Bacca, Sonia
name: Hagen, Gaute
Publisher: name: arXiv
Year: 2021
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We perform coupled-cluster calculations of ground- and dipole excited-state properties of the 8He halo nucleus with nucleon-nucleon and three-nucleon interactions from chiral effective field theory, both with and without explicit delta degrees of freedom. By increasing the precision in our coupled-cluster calculations via the inclusion of leading order three-particle three-hole excitations in the cluster operator, we obtain a ground-state energy and a charge radius that are consistent with experiment, albeit with a slight under-binding. We also investigate the excited states induced by the electric dipole operator and present a discussion on the Thomas-Reiche-Kuhn and cluster sum rules. Finally, we compute the electric dipole polarizability, providing a theoretical benchmark for future experimental determinations that will study this exotic nucleus.
description: 10 pages, 6 figures, corrected typos in Eq. (11) and in Table V, version accepted for publication
Virial clouds explaining the observed rotational asymmetry in the galactic halos
Creators: name: Qadir, Asghar
name: Tahir, Noraiz
name: Sakhi, Muhammad
Publisher: name: arXiv
Year: 2021
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: Rotation of galactic objects has been seen in the cosmic microwave background (CMB) that could be ascribed to molecular hydrogen clouds with, or without, dust contamination and contamination from other sources. We model the clouds using the canonical ensemble for pure molecular hydrogen, a mixture of hydrogen helium and/or dust, in order to constrain the physical parameters of these clouds. Since the clouds are cold, we justify the use of the canonical ensemble by explicitly calculating the interaction between the hydrogen molecules and the CMB photons and determining the time required for thermal equilibrium to be reached and show that there is enough time for equilibrium to be attained.
Additional file 1 of The ACAMTO study—impact of add-on osteopathic treatment on adolescent patients with anorexia nervosa: study protocol for a randomized controlled trial
Creators: name: Letranchant, Aurélie
name: Montebello, Yunkyung Kim-de
name: bigre, Corinne Dugré-Le
name: Wagner, Agathe
name: Curt, Florence
name: Silva, Jérôme
name: Nicolas, Isabelle
name: Votadoro, Pablo
name: Kalindjian, Nina
name: Korchonnoff, Anna
name: Gutierre, Andréa
name: Novelli, Ana Beatriz
name: Pham-Scottez, Alexandra
name: Corcos, Maurice
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1.
A resampling-based test to detect person-to-person transmission of infectious disease
Creators: name: Yang, Yang
name: Longini, Ira M.
name: Halloran, M. Elizabeth
Publisher: name: arXiv
Year: 2007
Subjects: subject: Applications (stat.AP)
subject: FOS: Computer and information sciences

description: Early detection of person-to-person transmission of emerging infectious diseases such as avian influenza is crucial for containing pandemics. We developed a simple permutation test and its refined version for this purpose. A simulation study shows that the refined permutation test is as powerful as or outcompetes the conventional test built on asymptotic theory, especially when the sample size is small. In addition, our resampling methods can be applied to a broad range of problems where an asymptotic test is not available or fails. We also found that decent statistical power could be attained with just a small number of cases, if the disease is moderately transmissible between humans.
description: Published at http://dx.doi.org/10.1214/07-AOAS105 in the Annals of Applied Statistics (http://www.imstat.org/aoas/) by the Institute of Mathematical Statistics (http://www.imstat.org)
Growth and Destruction of Disks: Combined HI and HII View
Creators: name: Bershady, Matthew
name: Verheijen, Marc
name: Crawford, Steven
Publisher: name: arXiv
Year: 2008
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: How large disk galaxies have evolved in, and out of, the blue cloud of actively star-forming galaxies as a function of environment and time is an outstanding question. Some of the largest disks become systems like M31, M33 and the Milky Way today. In denser environments, it appears they transform onto the red sequence. Tracking disk systems since z<0.5 as a function HI mass, dynamical mass, and environment should be possible in the coming decade. HI and optical data combined can sample outer and inner disk dynamics to connect halo properties with regions of most intense star-formation, and the gas reservoir to the consumption rate. We describe existing and future IFUs on 4-10m telescopes that complement upcoming HI surveys for studying disks at z<0.5. Multiple units, deployable over large fields-of-view, and with logarithmic sampling will yield kinematic and star-formation maps and properties of the stellar populations, resolving the core but retaining sensitivity to disk outskirts.
description: 6 pages, 3 figures; to appear in The Evolution of Galaxies through the Neutral Hydrogen Window, eds. R. Minchin and E. Momjian, AIPC, in press
Dynamics of Polymer Decompression: Expansion, Unfolding and Ejection
Creators: name: Sakaue, Takahiro
name: Yoshinaga, Natsuhiko
Publisher: name: arXiv
Year: 2008
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: The dynamics of polymer decompression, i.e., a process from compressed, compact state to the relaxed swoll en conformation, can be formally described as a {\it nonlinear diffusion}. We discuss here two basic examples: (i) the expansion, or unfolding from a compact state, and (ii) the ejection of pressed polymer through a pore. The problem can be solved exactly for the case (i), but not for the latter. Even in such situations, a scheme called {\it uniform approximation} is shown to be useful to get a physical insight involved. Its application to the case (ii) is able to account for conflicting numerical data in a consistent way.
description: 4 pages, 3 figures. to be published in Physical Review Letters
Catocala amatrix
Creators: name: Gall, Lawrence
name: Hawks, David
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Noctuidae
Catocala
Catocala amatrix

description: Catocala amatrix syn. nurus Walker Fig. 32 (lectotype) Catocala nurus Walker, [1858]: 1195 Catocala amatrix syn. nurus; Barnes and McDunnough 1918: 32 Catocala amatrix syn. nurus; McDunnough 1938: 117 Catocala amatrix syn. nurus; Franclemont and Todd 1983: 129 Type material. Catocala nurus: the original description states “a-c. United States. Presented by E. Doubleday, Esq.” A female type is at the BMNH, and is designated lectotype to clarify application of the name nurus. Th e lectotype bears the labels “ New York / Doubleday / 46-110”, “ New York / 46-110 [and on the reverse:] Catocala / nurus ♀ / Walker Type.” The name nurus Walker is a synonym of C. amatrix Hübner, [1813] and a homonym of Noctua nurus Hübner, 1822, which is itself a synonym of the Palearctic C. elocata (Esper, 1787). Type Locality: United States.
description: Published as part of Gall, Lawrence & Hawks, David, 2010, Systematics of moths in the genus Catocala (Lepidoptera, Erebidae) IV. Nomenclatorial stabilization of the Nearctic fauna, with a revised synonymic check list, pp. 37-83 in ZooKeys 39 (39) on page 65, DOI: 10.3897/zookeys.39.425, http://zenodo.org/record/576632
description: {"references": ["Barnes W, McDunnough J (1918) Illustrations of the North American species of the genus Catocala. Memoirs of the American Museum of Natural History 3: 1 - 47.", "McDunnough JH (1938) Check List of the Lepidoptera of Canada and the United States of America. Part I. Macrolepidoptera. Memoirs of the Southern California Academy of Sciences 1: 1 - 275.", "Franclemont JG, Todd EL (1983) Noctuidae. In: Hodges RW (Ed) Check list of the Lepidoptera of America north of Mexico. University Press, Cambidge, 120 - 159."]}
New Kind of Echo from Quantum Black Holes
Creators: name: Manikandan, Sreenath K.
name: Rajeev, Karthik
Publisher: name: arXiv
Year: 2021
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We propose that a quantum black hole can produce a new kind of late-time gravitational echoes, facilitated by a near-horizon process analogous to Andreev reflection in condensed matter systems. In comparison to the traditional echo scenarios where the near-horizon region is treated as an ordinary reflector, we argue that, consequent to near-horizon gravitational scattering, this region is better described by an Andreev reflector. Such interactions lead to a novel contribution to gravitational echoes with a characteristic phase difference, an effect which is analogous to how Andreev reflections lead to propagating particle-like and hole-like components with a relative phase in certain condensed matter scenarios. Moreover, this novel contribution to the echo signal encodes information about the `near-horizon quantum state', hence offering a possible new window to probe the quantum nature of black holes.
description: 10 pages, 2 figures. Title modified to match the published version
Additional file 1 of Role of financial incentives in family planning services in India: a qualitative study
Creators: name: Lalchandani, Kamlesh
name: Gupta, Aditi
name: Srivastava, Ashish
name: Usmanova, Gulnoza
name: Maadam, Ashwarya
name: Sood, Bulbul
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Science Policy
subject: 60506 Virology

description: Additional file 1.
Additional file 3 of Evaluating the usability and acceptability of a geographical information system (GIS) prototype to visualise socio-economic and public health data
Creators: name: Wells, Joshua
name: Grant, Robert
name: Chang, John
name: Kayyali, Reem
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Science Policy

description: Additional file 3. Interview guide for expert participants
Additional file 2 of Evaluating the usability and acceptability of a geographical information system (GIS) prototype to visualise socio-economic and public health data
Creators: name: Wells, Joshua
name: Grant, Robert
name: Chang, John
name: Kayyali, Reem
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Science Policy

description: Additional file 2. Interview guide for voluntary sector participants
Additional file 4 of Evaluating the usability and acceptability of a geographical information system (GIS) prototype to visualise socio-economic and public health data
Creators: name: Wells, Joshua
name: Grant, Robert
name: Chang, John
name: Kayyali, Reem
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Science Policy

description: Additional file 4. Interview guide for healthcare professional participants
Additional file 5 of Evaluating the usability and acceptability of a geographical information system (GIS) prototype to visualise socio-economic and public health data
Creators: name: Wells, Joshua
name: Grant, Robert
name: Chang, John
name: Kayyali, Reem
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Science Policy

description: Additional file 5. Interview guide for public participants