cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Tricellaria dubia Silen 1941
Creators: name: Martino, Emanuela Di
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Bryozoa
Gymnolaemata
Cheilostomatida
Candidae
Tricellaria
Tricellaria dubia

description: Tricellaria dubia Silén, 1941
(Fig. 26; Table 24)
Tricellaria dubia Silén, 1941: 78, figs 93–95.
Material examined. Paratype UPSZTY 2475, Okinose, Sagami, Japan; depth 150–600 m. Leg. Prof. S. Bock 1914. The material consists of three small colony fragments: A, two internodes (Fig. 26A); B, two internodes (Fig. 26B–F); C, three internodes, two of which incomplete (Fig. 26G, H).
Description. Colony erect, jointed, fixed to the substrate by smooth rhizoids (Fig. 26A); internodes straight, formed by 6–8 autozooids between bifurcations and joints at the basis of the branch.
Autozooids club-shaped, curved, elongate (mean L/ W 2.85), distinct, separated by shallow furrows, arranged in alternating biserial rows (Fig. 26A, B).
Opesia elliptical occupying about two-fifths of zooidal length (mean OpL/ZL 0.45) outlined by a raised, beaded rim of cryptocyst (Fig. 26E); smooth cryptocyst forming a narrow (c. 15–30 µm), slightly depressed band proximally, steeply sloping laterally and distally (Fig. 26F); scutum arising from a stout base (15–20 µm in diameter) placed on the inner edge of opesia at about its mid-length or proximal third, irregularly rounded, 60–110 × 50–90 µm, usually more developed proximally than distally, and often with an asymmetrical projection at the distal outer corner (Fig. 26C–E); two articulated spines on the outer edge of each autozooid, the distal spine short and thin (35–85 µm long and 12–20 µm in diameter), the distolateral one very long and robust (at least 415–485 µm long and 25–40 µm in diameter), often curved towards the front of the branch (Fig. 26A–C, G).
Dorsal side smooth with a median shallow furrow marking zooidal boundaries (Fig. 26G, H).
Avicularia absent. Ovicells not observed.
Remarks. Silén (1941) mentioned the absence of ooecia in the holotype (i.e. SMNH-Type-9376) but remarked their presence in paratypes from the Bonin Islands (locality 34). Specimens examined here, which are paratypes from locality 29, also lack ooecia. They are described as large, a little elongate with a shallow depression distally in the front, without a fenestra. Locality numbers refer to the list provided in Silén (1941).
description: Published as part of Martino, Emanuela Di, 2023, Scanning electron microscopy study of Lars Silén's cheilostome bryozoan type specimens in the historical collections of natural history museums in Sweden, pp. 1-106 in Zootaxa 5379 (1) on pages 51-52, DOI: 10.11646/zootaxa.5379.1.1, http://zenodo.org/record/10209083
title: Mapping Of An Entire Geological Thin Section In Seconds With Ultra-High Throughput Using SEM - EDS
Creators: name: Patzschke, Max
name: Menzies, Andrew
Publisher: name: Deutsche Geologische Gesellschaft - Geologische Vereinigung e.V. (DGGV)
Year: 2024

description:
Elemental overview of a thin section (2.5 x 2 cm) typically requires large-area mapping over numerous fields, which can take several hours with conventional approaches. To shorten the measurement time without compromising data quality, we utilize the annular EDS FlatQUAD detector, capable of collecting up to 2.4 million counts per second. This speed reduces the required time-per-pixel, dwell time per frame, and overall measurement time, enabling the mapping of major elemental distributions across an entire thin section in under a minute.

In this example of a garnet-spinel peridotite from South Africa, we compare measurements of the entire thin section which took several hours to cover the 8 x 14 fields, resulting in high statistical accuracy compared with ultra-high-speed mappings revealing elemental distribution in less than one minute measurement time for the entire thin section. This example showcases the efficiency and capability of advanced EDS technology in geological studies. Extending the measurement time will result in much better statistics, and the software can detect mineral phases automatically; however, the major elements distribution is clearly visible in a short analytical run time for the entire thin section, including offline extraction of spectra from each pixel in the map for further quantification.
Microporina okadai Silen 1941
Creators: name: Martino, Emanuela Di
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Bryozoa
Gymnolaemata
Cheilostomatida
Microporidae
Microporina
Microporina okadai

description: Microporina okadai Silén, 1941
(Fig. 27; Table 25)
Microporina okadai Silén, 1941: 68, figs 79–82, pl. 4, fig. 13, 14. Material examined. Holotype by original designation UPSZTY 2468, Okinose, Sagami, Japan; depth 150–600 m. Leg. Prof. S. Bock 1914.
Description. Colony erect, jointed, dichotomously branching (Fig. 27A); internodes straight, quadrangular in cross-section, quadriserial (Fig. 27D).
Autozooids elongate-rectangular (mean L/ W 3.70), proximal margin concave, distal margin convex, arranged in alternating back-to-back series; cryptocyst forming a raised mural rim (50–60 µm wide), minutely granular with granules (5 µm or less in diameter) regularly aligned forming multiple concentrical rows, and modified to follow the outline of the avicularium at the distal edge (Fig. 27E); frontal cryptocyst immersed and flat with sparse granules, slightly coarser than those of the mural rim (8–10 µm), and unevenly distributed circular pseudopores (10–15 µm in diameter) (Fig. 27B); a pair of lateral opesiules at a short distance (c. 40–50 µm) from the proximal margin of the orifice (Fig. 27B, see arrows).
Orifice semielliptical with straight or concave proximal margin, wider than long, outlined by a raised rim (Fig. 27B).
Avicularium adventitious, single, placed distally to most autozooids, oval (Fig. 27D–F); rostrum acutely triangular, raised, proximally directed; crossbar complete; mandible triangular with downward hooked tip (Fig. 27C, see arrow).
Ovicells absent.
Remarks. The autozooid illustrated in Fig. 27B was the only one without a frontal membrane, in which lateral symmetrical depressions adjacent to the mural rim and at a short distance from the proximal margin of the orifice were observed. These structures were, therefore, interpreted as the ‘opesiulae’ described and drawn in Silén (1941, fig. 81). SEM images of an internode with well-defined opesiules are available from Arakawa (2016, fig. 9B).
Of the 12 species currently assigned to Microporina more than half are from the Pleistocene to Recent of Japan (Bock 2023). Based on the species comparison of Arakawa (2023, table 1), among the Japanese Microporina, M. okadai has the narrowest internodes and longest autozooids.
description: Published as part of Martino, Emanuela Di, 2023, Scanning electron microscopy study of Lars Silén's cheilostome bryozoan type specimens in the historical collections of natural history museums in Sweden, pp. 1-106 in Zootaxa 5379 (1) on pages 53-54, DOI: 10.11646/zootaxa.5379.1.1, http://zenodo.org/record/10209083
Additional file 1 of Relationships between neurodivergence status and adverse childhood experiences, and impacts on health, wellbeing, and criminal justice outcomes: findings from a regional household survey study in England
Creators: name: Wilson, Charley
name: Butler, Nadia
name: Quigg, Zara
name: Moore, David
name: Bellis, Mark
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Science Policy

description: Additional file 1: Table S1 Multivariate relationships between neurodivergence and ACE count and poor general health. Table S2 Multivariate relationships between neurodivergence and ACE count and low mental wellbeing. Table S3 Multivariate relationships between neurodivergence and ACE count and ever being arrested. Table S4 Multivariate relationships between neurodivergence and ACE count and ever being incarcerated.
Flow diverting stent monotherapy as the best choice in the treatment of intracranial blood blister-like aneurysms: a systematic review
Creators: name: Ghorbani, M.
name: Keykhosravi, E.
name: Vatanparast, M.
name: Elyassirad, D.
name: Kakhki, F. T.
name: Gheiji, B.
name: Golchin, N.
name: Zamani, Z.
name: Lafta, G.
name: Hasanpour, Mohammad
Publisher: name: figshare
Year: 2024
Subjects: classificationCode: 320226
subject: Surgery
classificationCode: 320999
subject: Neurosciences not elsewhere classified
classificationCode: 429999
subject: Other health sciences not elsewhere classified

description: OBJECTIVE: To evaluate the effectiveness and safety of flow-diverting stent (FDS) monotherapy in the treatment of intracranial blood blister-like aneurysms (BBAs) through a detailed systematic review. METHODS: This review adheres to the PRISMA guidelines, focusing on studies utilizing FDS monotherapy for BBAs, spanning from July 2010 to November 2023. A systematic search across databases including Embase, Medline/PubMed, Scopus, and Google Scholar was conducted. Studies in English that solely used FDS for BBA treatment and assessed perioperative complications were included. Data from 23 studies encompassing 181 cases were systematically analyzed for patient demographics, aneurysm characteristics, treatment specifics, and outcomes. RESULTS: The collected data indicates a dominant occurrence of BBAs in the internal carotid artery (86.9%), with a mean patient age of 50.27 years and a higher prevalence in females (73.43%). Treatment timing varied, with 45.9% treated within the first three days, 35.7% were treated between 4 and 14 days, and 18.4% of patients were treated after 14 days. The study found a complete occlusion rate of 88.1% in follow-up imaging and a favorable clinical outcome in 82.2% of cases. Periprocedural complications were reported in 19.2% of patients, with a related mortality rate of 3.9%. CONCLUSIONS: The systematic review demonstrates that FDS monotherapy is highly effective and safe in the treatment of intracranial BBAs. It offers a high rate of complete aneurysm occlusion, favorable clinical outcomes, and low complication rates. These results highlight FDS monotherapy as a prominent treatment method, ensuring robust aneurysmal protection while maintaining the patency of the parent artery.
Genève, Bibliothèque de Genève, Ms. l.e. 206 : Composite manuscript of Waldensian treatises and sermons
Creators: name: Senebier, Jean
name: Léger, Jean
Publisher: name: e-codices - Virtual Manuscript Library of Switzerland
Year: 2024

description: This manuscript was probably written in the 15th century in the Waldensian Valleys of Piedmont (Italy). As also with a large part of the remaining Waldensian manuscripts, now dispersed across various European libraries, this is a collection of various treatises, sermons and upraising or doctrinaire texts. This manuscript probably reached Geneva around 1661, where it was brought, together with other manuscripts, by the Waldensian pastor Jean Léger. Classified as a Spanish manuscript by Jean Senebier in 1779, it was not recognized as Waldensian until the middle of the 19th century.
description: Online Since: 2016-06-23
Chironico, Archivio parrocchiale, n. 66 : "Martirologio-calendario" (obituary) of the Parish of S. Ambrogio of Chironico
Publisher: name: e-codices - Virtual Manuscript Library of Switzerland
Year: 2024

description: Obituary of the Parish of S. Ambrogio of Chironico (Ticino), written by the priest Ambrogio Rossi of Chironico, who copied an older obituary that was probably damaged or had no more space. The Ambrosian type calendar lists the stipends for annual masses or for anniversaries, the  solemnities, the indulgences and notes regarding the pledges to the parish and to the entire valley. On December 28, the Feast of the Holy Innocents, the commemoration of the Battle of Giornico (Battaglia dei Sassi Grossi, 1479) is recorded.
description: Online Since: 2016-06-23
St. Gallen, Stiftsbibliothek, Cod. Sang. 3 : Bible (Gn, Ex, Lv, Nm, Dt, Ios, Idc, Rt)
Creators: name: Ambrosius, Mediolanensis
name: Hieronymus, Sophronius Eusebius
Publisher: name: e-codices - Virtual Manuscript Library of Switzerland
Year: 2024

description: This manuscript in two columns contains a copy of the first eight books of the Old Testament (Pentateuch, Joshua, Judges, Ruth) that was transcribed at the monastery of St. Gall in the 12th century. At the beginning (p. 1) and at the end (p. 254), there are, in addition to occasional pen trials and additional notes in Latin and in German, copies of two hymns with neumes (Veni redemptor gentium by Ambrose and Jesu redemptor omnium).
description: Online Since: 2016-06-23
title: Confocal Micro X-Ray Fluorescence for Spatial Analysis of Mineral Inclusions, Biomineralization Composites and Building Materials
Creators: name: Heimler, Korbinian
name: Vogt, Carla
Publisher: name: Deutsche Geologische Gesellschaft - Geologische Vereinigung e.V. (DGGV)
Year: 2024

description:
Micro X-ray Fluorescence (MXRF) spectrometers enable non-destructive and elemental analysis of a wide variety of solid samples with a lateral resolution of a few tens of micrometers using focusing optics. Confocal MXRF (CMXRF) offers additional depth-dependent measure­ment capabilities, based on a three-dimensional probing volume created by the confocal ar­rangement of a focusing lens in the excitation and detection channel. Therefore, CMXRF pro­vides micro-scalic resolved measurements of complete sample volumes by depth profiles (1D), cross section mappings (2D) and stacked element distribution images (3D). The strengths, challenges and potential of a modified (confocal) MXRF tabletop spectrometer for non-destruc­tive and depth-sensitive element analysis will be illustrated by geoanalytical and geo-related appli­cations:

The first application is the three-dimensional analysis of mineral inclusions. The sophisticated compositional studies and identification of mineral phases by CMXRF provides micro-scalic resolutions with certain limitations due to X-ray absorption, but also preserves the integrity of isolated inclusions for further analysis.

Another example is the study of biomineralization products, due to the biomimetic behavior of deep-sea sponges under extreme conditions resulting in the formation of novel three-dimen­sional composites. Several mineralization products such as atacamite, goethite and lepido­crocite have been studied by three-dimensional reconstruction of the elemental distribution of the formed composites.

The third application is the depth-sensitive analysis of the elemental composition of ce­ment stone corrosion zones simulating the acidic chemical attack on concrete samples. The interest in describing those corrosion processes is motivated by defining the occurring kinetics and deriving information about the persistence, strength and durability of concrete.
St. Gallen, Stiftsbibliothek, Cod. Sang. 4 : Isidore of Seville, Commentary on the Old Testament Books Ex, Dt, Ios, Idc; Copy of the Book of Leviticus (Lv) with interlinear commentary
Creators: name: Isidorus, Hispalensis
name: Blarer von Wartensee, Diethelm
Publisher: name: e-codices - Virtual Manuscript Library of Switzerland
Year: 2024

description: This manuscript contains as its first part Isidore of Seville’s commentary on the Old Testament Books Exodus (pp. 1−44), Deuteronomy (pp. 44−53), Joshua (pp. 53−62) and Judges (pp. 62−71). These commentaries are a part of his work Mysticorum expositiones sacramentorum seu quaestiones in vetus testamentum. The second part (pp. 73−135), written in a different, more accurate hand, contains a copy of the Book of Leviticus with a more extensive interlinear commentary that was planned from the outset. Between the two parts (p. 72) is the library stamp from the abbacy of Prince-Abbot Diethelm Blarer, in use between 1553 and 1564.
description: Online Since: 2016-06-23
Additional file 1 of Narratives of health-promoting experiences by older husbands and wives providing care to their home-dwelling spouses receiving home-care services in Norway
Creators: name: Melilla, Hege Stokmo
name: Sverre, Beate Lie
name: Eilertsen, Grethe
name: Tønnessen, Siri
Publisher: name: figshare
Year: 2024
Subjects: Biochemistry
Science Policy
Biological Sciences not elsewhere classified
Cancer

description: Additional file 1: This file contains an extended version of the Interview guide.
St. Gallen, Stiftsbibliothek, Cod. Sang. 525 : Composite manuscript with, among others, commentary on the hymnal, Vocabularius Ex quo, Speculum humanae salvationis
Creators: name: Pater Pius Kolb
name: Arx, Ildefons von
name: Hugo, de Sancto Caro
Publisher: name: e-codices - Virtual Manuscript Library of Switzerland
Year: 2024

description: Composite manuscript containing mainly theological texts and, as the largest part (pp. 61–212), the Vocabularius Ex quo. The remaining works are a commentary on the hymnal, where each verse of a hymn alternates with the corresponding explanation (pp. 1–56), a short treatise De humani cordis instabilitate (pp. 57–60), sermons (pp. 212–229, 240–268 and 268–273), the life of Albert of Trapani (Albertus Siculus) (pp. 230–239), the Speculum humanae salvationis (pp. 274–335), a short treatise on virtues and vices called Etymachia or Lumen animae (pp. 335–345), excerpts from Jerome, Augustine and others (pp. 346–368), as well as the Speculum ecclesiae by Hugo de S. Caro (pp. 370–391). The latter is written on a parchment palimpsest , the underwriting (“scriptio inferior”) is in Rotunda script. Four red and bleu fleuronné initials from the underwriting have survived (p. 372, 373 and 375). The last pages contain responsories for Christmas (Descendit de celis deus verus), the Feast of Saint Mark (Beatissimus Marcus discipulus) and Commune plurimum martyrum (Viri gloriosi sanguinem fuderunt), and also the Easter trope (Quem queritis) with melodies in square notation on four lines (pp. 392–394). The manuscript consists of parchment and paper, sometimes even mixed within one quire. This codex has been at the monastery of St. Gall at least since 1553/64 (library stamp p. 60).
description: Online Since: 2016-06-23
title: The Late Paleozoic ignimbrite flare-up of central Europe: Following magma source and pathways by mineralogical and geochemical constraints
Creators: name: Repstock, Alexander
name: Słodczyk, Elżbieta
name: Zeug, Manuela
name: Menzies, Andrew
Publisher: name: Deutsche Geologische Gesellschaft - Geologische Vereinigung e.V. (DGGV)
Year: 2024

description:
A swarm of devastating caldera-forming eruptions (>VEI 6) blanketed the Permo-Carboniferous of central Europe with voluminous pyroclastic deposits within a long-lasting period of 50 Myrs. Although of different tectonic setting, the pyroclastic record of this ignimbrite flare-up is similar to the Cenozoic deposits in the western USA, ranging from crystal-poor rhyolitic Snake River-type and compositionally zoned tuffs to crystal-rich monotonous intermediates and rhyolites.

Combined textural and chemical analysis data on whole rock, juvenile fragments (fiamme, glass shards), and mineral phases were acquired to unravel the origin and lithospheric evolution of the magma reservoirs. Two different geochemical suites can be distinguished: (I) a diopside- and (II) a corundum-normative. Examples of the diopside-normative suite are the caldera systems of Wurzen and the Wendland, as well as the vitrophyric Planitz Ignimbrite. Although all pyroclastic deposits show corundum-normative compositions; solely, the magma system of the Flechtingen Ignimbrite crystallizes almandine-garnet in a deep-seated magma chamber. In general, thermobarometric estimations suggest an interplay of hydrous near-solidus granitic systems penetrated by anhydrous SiO2-rich superheated magmas. These systems can be tracked down to depths of 25 to 40 km (7-12 kbars) and provide insights into the post-Variscan rift-related magmatic activity.
St. Gallen, Stiftsbibliothek, Cod. Sang. 533 : Directorium perpetuum of the Monastery of St. Gall, Serie prima, Regulae 1-2
Creators: name: Cuontz, Johannes
name: Arx, Ildefons von
name: Sicher, Fridolin
name: Bertschi, Nikolaus
name: Gaisberg, Franz
Publisher: name: e-codices - Virtual Manuscript Library of Switzerland
Year: 2024

description: The Directorium perpetuum of the monastery of St. Gall, commissioned by Abbot Franz von Gaisberg (1504–1529), consists of seven volumes (Cod. Sang. 533–539). A total of 36 regulae contain the liturgical rules for the Liturgy of the Hours for all possible annual calendars, due to the variable date of Easter. Each rule begins with Epiphany; the rules for the holidays of the Christmas season until the Vigil of Epiphany (which do not depend on the date of Easter) are compiled in Cod. Sang. 539. Cod. Sang. 533 contains the first and second rule, for when Easter falls on March 22nd and 23rd (reference date in the codex: Septuagesima, January 18th/19th). The illumination of the manuscript is by Nikolaus Bertschi from Rorschach: p. 6  contains a full-page miniature (at the top a Lamentation of Christ with the donor, below Saint Gall and Saint Othmar supporting the coat of arms), p. 7 and p. 65 have initials in gold leaf and richly decorated borders. Unlike the following volumes, this volume was not written by Fridolin Sicher.
description: Online Since: 2016-06-23
title: The "Demo-conomics" in African youth politics
title: youth bulge and unemployment meet political attitude and participation
titleType: Subtitle
Creators: name: Bonnah Nkansah, Godfred
Publisher: name: German Institute for International and Security Affairs ;  German Institute of Sustainability and Develop-ment (IDOS) ; Kiel Institute for the World Economy (IfW)
Year: 2025

description: Working Paper / Megatrends Afrika, 15
Figularia japonica Silen 1941
Creators: name: Martino, Emanuela Di
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Bryozoa
Gymnolaemata
Cheilostomatida
Cribrilinidae
Figularia
Figularia japonica

description: Figularia japonica Silén, 1941
(Fig. 29; Table 27)
Figularia figularis var. japonica Silén, 1941: 115, figs 174–177.
Figularia japonica: Yang et al., 2018: 225, figs 28, 29.
Material examined. Holotype by original designation SMNH-Type-9377 (not figured), North Pacific, Yokohama Bay, Tokyo, Japan; depth 115 m. Leg. Vega Expedition 1878–1880, Station 1083. Paratypes UPSZTY 2467 (three colonies on calcareous bioclast fragments, Fig. 29), UPSZTY 191155 (one colony encrusting a pectinid shell, not figured)], Goto Islands, Kyushu (33°41' N; 128°50' E), Japan; depth 110 m; from a sandy sea-bottom. Leg. Prof. S. Bock 1914.
Remarks. A recent, updated description of this species is given in Yang et al. (2018), and therefore omitted here. Yang et al. (2018) also elevated the rank of the taxon from subspecies to species.
The holotype designated by Silén (1941) was collected at 115 m depth at Tokyo Bay from a muddy sea-bottom, and is kept in ethanol at the SMNH. Given the apparent fragility of the specimen, SEM study was avoided. As for Tricellaria dubia, the specimens illustrated here are listed in the original publication as part of the type series and they can be considered paratypes based on the article 72.4.5 of the International Code of Zoological Nomenclature (ICZN, 1999). Holotype and paratypes were collected in two separate expeditions.
Genus Jullienula Bassler, 1953
description: Published as part of Martino, Emanuela Di, 2023, Scanning electron microscopy study of Lars Silén's cheilostome bryozoan type specimens in the historical collections of natural history museums in Sweden, pp. 1-106 in Zootaxa 5379 (1) on pages 56-58, DOI: 10.11646/zootaxa.5379.1.1, http://zenodo.org/record/10209083
Axe 'Em: Eliminating Spurious States with Induction Axioms (Artifact)
Creators: name: Elad, Neta
name: Shoham, Sharon
Publisher: name: Zenodo
Year: 2024

description: Artifact for the POPL '25 paper "Axe 'Em: Eliminating Spurious States with Induction Axioms".

The artifact is provided as a Docker image, and includes the Python package for the auto-axiomatizer tool, and benchmarks (encoded in Z3's programmatic API). There are two images, `popl25-axe-em-artifact-arm64.tar.gz` (for Mac M1/M2/M3) and `popl25-axe-em-artifact-amd64.tar.gz`.

For more details, see the `POPL25-README.md` file.

Note that the run times of the benchmarks inside the container can differ from the times measured (in Table 1).
Additional file 1 of Three-dimensional digital anatomical measurements of pterygoid plates and posterior maxillary region
Creators: name: Kwon, Dohyun
name: Kim, Soung Min
name: Lee, Jong-Ho
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Environmental Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified

description: Supplementary Material 1.
Sustainability of Earth Science Data Infrastructure Projects: A Study of 11 Projects
Creators: name: Virapongse, Arika
name: Gallagher, James
name: Tikoff, Basil
Publisher: name: Zenodo
Year: 2023

description: Cyberinfrastructure is an essential part of how science is done today, but sustaining the projects that provide these services is a challenge. We studied 11 long-term data infrastructure projects, most focused on the Earth Sciences, to understand the characteristics that contributed to their sustainability. Among our sample group, we noted the existence of three types of project groupings: Database, Framework, and Middleware.

Database projects aim to bring together data and data resources for use.

Middleware projects seek to develop software and technology.

Framework projects focus on developing best practices.

The conflicting expectations, limitations, and needs of academia and cyberinfrastructure development presented challenges for all project types. Although none of the studied projects began with a formal governance model, each project adopted a model over time. Most of the efforts started as funded research projects, and nearly all became organizations in order to become sustainable. Projects were often funded for short time scales, but had the long-term burden of sustaining and supporting open science, interoperability, and community building–activities that are difficult to fund directly. This transition from “project” to “organization” was challenging for most efforts, and specifically in regards to leadership change and funding issues.

Some common approaches to sustainability were identified within each project grouping. Framework and Database projects both rely heavily on the commitment to, and contribution from, a disciplinary community. Framework projects often used bottom-up governance approaches to maintain the active participation and interest of their community. Database projects succeeded when they were able to position themselves as part of the core workflow for disciplinary-specific scientific research. Middleware projects borrowed heavily from sustainability models used by software companies, while maintaining strong scientific partnerships. Cyberinfrastructure for science requires considerable resources to develop and sustain itself, and much of these resources are provided through in-kind support from academics, researchers, and their institutes. More work is need to find appropriate models that help sustain key data infrastructure for Earth Science over the long-term.
St. Gallen, Stiftsbibliothek, Cod. Sang. 580 : Benedict of Peterborough, Miracula sancti Thomae Cantuariensis
Creators: name: Benedictus, Petroburgensis
name: Pater Pius Kolb
name: Hugh, Pudsey
name: Arx, Ildefons von
Publisher: name: e-codices - Virtual Manuscript Library of Switzerland
Year: 2024

description: This codex contains the miracles of Saint Thomas of Canterbury, which the Benedictine monk Benedict of Peterborough began to collect after Thomas’ murder on December 29, 1170. The manuscript, which has beautiful initials with scroll ornamentation on p. 12, was written by two hands in the Southwestern region of Germany towards the end of the 12th or the beginning of the 13th century. The collection of miracles is divided into four books, of which the last nine chapters (IV.95-96, V.1-4, VI.1-3 of this edition) and the following letter from the Bishop of Durham, Hugh du Puiset, are not numbered. The manuscript is listed in the Monastery of St. Gall catalog from the year 1461.
description: Online Since: 2016-06-23
St. Gallen, Stiftsbibliothek, Cod. Sang. 582 : Jacobus de Voragine, Legenda aurea (Legenda sanctorum / Historia Lombardica)
Creators: name: Arx, Ildefons von
name: Jacobus, de Voragine
Publisher: name: e-codices - Virtual Manuscript Library of Switzerland
Year: 2024

description: This manuscript, probably produced in the 14th century in the area around Lake Constance, contains a copy of the main part of the Legenda Aurea by Jacobus de Voragine (pp. 5−691), as well as small parts of the so-called Provincia appendix (p. 691−701). On the last three pages a sermon for the Feast of Saints Peter and Paul (June 29) has been added. The area of Lake Constance is suggested by remains of a document glued to the front and back inside covers (probably parts of the writing “Konstanz”) and also by an ownership note on p. 704 dated to the late 15th or the early 16th century from a community of sisters near Stammheim (Vnnser frouwen ze niderstamhem ist das …). This could refer to the community of Beguines of Haslen in the municipality of Adlikon in the Zürcher Weinland (wine country of Zurich), which was dissolved during the Reformation. This volume has been the property of the library of the monastery St. Gall at least since the middle of the 18th century.
description: Online Since: 2016-06-23
Axe 'Em: Eliminating Spurious States with Induction Axioms (Artifact)
Creators: name: Elad, Neta
name: Shoham, Sharon
Publisher: name: Zenodo
Year: 2024

description: Artifact for the POPL '25 paper "Axe 'Em: Eliminating Spurious States with Induction Axioms".

The artifact is provded as a Docker image, and includes the Python package for the auto-axiomatizer tool, and benchmarks (encoded in Z3's programmatic API).

For more details, see the `POPL25-README.md` file.

Note that the run times of the benchmarks inside the container can differ from the times measured (in Table 1).
St. Gallen, Stiftsbibliothek, Cod. Sang. 583 : Mechthild von Hackeborn, Liber specialis gratiae
Creators: name: Pater Pius Kolb
name: Lentulus
name: Buchegger, Franz Eduard
name: Arx, Ildefons von
name: Morel, Gallus
name: Scherrer, Gustav
name: Tauler, Johannes
name: Mechthild, von Hackeborn
name: Conradus, de Prussia
Publisher: name: e-codices - Virtual Manuscript Library of Switzerland
Year: 2024

description: This codex contains the first five books of the Liber specialis gratiae by Mechthild von Hackeborn; books 6 and 7 are missing. On p. 3 there is also a fragment of the Epistola de Ihesu Christo by Ps.-Lentulus Romanus de Judea. The notes on p. 224, which name Johannes Tauler and Konrad (in the codex: Johannes) of Prussia as previous owners, suggest an origin in a Dominican environment. In the 15th century, this manuscript belonged to Ulrich Varnbüler (brother of Angela Varnbüler, who was prioress of the Dominican Convent St. Katharina in St. Gall from 1476-1509; mayor/imperial vogt of St. Gall 1481-1490).
description: Online Since: 2016-06-23
St. Gallen, Stiftsbibliothek, Cod. Sang. 657 : Constance Chronicle; Zurich Chronicles; Chronicle of the Council of Constance according to Ulrich of Richenthal
Creators: name: Ulrich, von Richental
name: Ulricus, Krigius
name: Arx, Ildefons von
name: Tschudi, Aegidius
name: Hemmerlin, Felix
Publisher: name: e-codices - Virtual Manuscript Library of Switzerland
Year: 2024

description: This manuscript, written in the second half of the 15th century, probably shortly after 1450, contains first (pp. 1−46) the Constance World Chronicle from the end of the 14th century. This is followed by the Zurich Chronicle from the beginnings to the start of the 15th century (pp. 47−121), a continuation of the Zurich Chronicle about the years 1420/21, 1436 and 1443−1450 (pp. 121−132), and a abbreviated edition of the Chronicle of the Council by Ulrich of Richenthal (pp. 132−228). Based on an examination of the handwriting, in the older literature it is considered that the early humanist Felix Hemmerli (1388/89−1454) from Zurich may have been the scribe. The manuscript was owned by the Swiss scholar Aegidius Tschudi (1505−1572) and was sold to the monastery of St. Gall by his family in February 1768. Tschudi added various marginal notes and corrections to the texts.
description: Online Since: 2016-06-23
Additional file 1 of Platelet-derived extracellular vesicles induced through different activation pathways drive melanoma progression by functional and transcriptional changes
Creators: name: Tavukcuoglu, Zeynep
name: Butt, Umar
name: de Faria, Alessandra V. Sousa
name: Oesterreicher, Johannes
name: Holnthoner, Wolfgang
name: Laitinen, Saara
name: Palviainen, Mari
name: Siljander, Pia R-M
Publisher: name: figshare
Year: 2024
Subjects: Biochemistry
Space Science
Medicine
Cell Biology
Molecular Biology
Pharmacology
Biotechnology
Developmental Biology
Cancer
Hematology

description: Supplementary Material 1
Cologny, Fondation Martin Bodmer, Cod. Bodmer 600a : The Life of Buddha, first book (Shaka no Honji, jō)
Publisher: name: e-codices - Virtual Manuscript Library of Switzerland
Year: 2024

description: The book belongs to the category of nara ehon, a type of polychrome, illustrated narratives published from the Muromachi period though to the first half of the Edo period. The term nara ehon has been widely applied to all illustrated books from these periods since the Meiji era, but its origin is unclear. The format of nara ehon differs, depending on the period. Early examples from the Momoyama to the very early Edo period are tall, measuring about 30 cm in height, a vertical format similar to a European quarto. The examples produced from the Kanei era onwards, within the first half of the Edo period were more of a horizontal proportion. They were also generally based on the genre of otogizōshi, short stories that emerged from the Kamakura period onwards, a majority of them focusing on the Muromachi period. During the latter half of the 17th century, the topic shifted to stories about the aristocracy or the wealthy merchant class, before the popularity nara ehon began to decline. This example can possibly dated to the Keichō era (1596-1615).
description: Online Since: 2016-06-23
Camatopsis valida Ng & Castro, 2016, n. sp.
Creators: name: Ng, Peter K. L.
name: Castro, Peter
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Decapoda
Chasmocarcinidae
Camatopsis
Camatopsis valida

description: Camatopsis valida n. sp.
(Figs. 7 G, H; 23H; 39I, J; 51E; 58E; 69G‒K; 90E)
Type material. Holotype male (3.6 × 4.9 mm) (MNHN-IU-2013-9067), Fiji, south of Viti Levu, MUSORSTOM 10, stn DW1362, 18°11.7’S, 178°35.5’E, 80‒89 m, 14.08.1998.
Paratypes. 1 female (3.5 × 4.3 mm) (MNHN-IU-2013-9467), MUSORSTOM 10, Fiji, Bligh Water, stn CP1323, 17°16.10’S, 177°45.75’E, 143‒173 m, 0 7.08.1998.
Diagnosis. Carapace (Fig. 7 G, H) subtrapezoidal, 1.2‒1.3 wider than long; front bilobed, with shallow median cleft; anterolateral margins arcuate, minutely granular with granules higher along lateral margins, without distinct lobes or teeth. Eye peduncle (Fig. 23 H) filling orbit, short, slightly mobile; cornea reduced, with reduced pigmentation. Epistome (Fig. 23 H), semicircular median lobe with deep median fissure, semicircular lateral margins. Third maxilliped (Fig. 69 G) merus circular, ischium subquadrate, slightly longer than merus. Proportionally short ambulatory legs (Fig. 7 G, H); P5 merus 0.7 cl. Chelipeds (Figs. 7 G, H; 39I, J) subequal in length, heteromorphic in males. Major chela of holotype male (Fig. 39 I) with thick propodus, nearly triangular in dorsal view, cutting margins without distinct teeth except distal end of pollex overlapping dactylus. Minor chela of both sexes (Fig. 39 J) with cutting margin of pollex having few teeth. Inner margin of cheliped carpus smooth. Fused thoracic sternites 1, 2 (Fig. 51 E) triangular, proportionally narrow, long. Male pleon (Figs. 51 E; 58E) with proportionally short telson. G1 (Fig. 69 H‒J) conspicuously short, stout, distal segment curved outwards with short to long spinules. G2 (Fig. 69 K) about 3/4 G1 length, slightly curved, slender, short, straight distal segment. Female pleon with lateral margins of somites strongly convex; telson proportionally short. Sterno-pleonal cavity of female (Fig. 90 E) moderately deep, vulvae relatively close together.
Etymology. The name is derived from the Latin validus for “stout” alluding to the relatively stocky G1 of the species.
Remarks. In addition to the characteristic G1 and distinctive male chela, the new species can be easily distinguished from C. leptomerus and C. rubida (which are also found in Fiji) by having a different carapace form: it is proportionately broader, and the gastric and branchial regions are lower and relatively less convex (Fig. 7 G, H vs. Figs. 6; 8A–F). The carapace characters can easily distinguish between females, even if the G1 and cheliped characters cannot be used.
Distribution. Known only from Fiji. Depth: 80‒ 173 m.
description: Published as part of Ng, Peter K. L. & Castro, Peter, 2016, Revision of the family Chasmocarcinidae Serène, 1964 (Crustacea, Brachyura, Goneplacoidea), pp. 1-182 in Zootaxa 4209 (1) on page 45, DOI: 10.11646/zootaxa.4209.1.1, http://zenodo.org/record/272646
Compactozetes Hammer 1966
Creators: name: Colloff, Matthew J.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Sarcoptiformes
Cepheusidae
Compactozetes

description: Compactozetes Hammer, 1966
Compactozetes Hammer, 1966, p. 76.
Type species: Compactozetes rotoruensis Hammer, 1966
Diagnosis: the following diagnosis is modified from that of Luxton (1988a). Medium-sized to large oribatid mites (450–1,300 μm); rostrum rounded or acute; apices of lamellae fused with each other and rostrum, forming large paired foramina between lamellae and prodorsum. Lamellar setae located on anterior margin of lamellae or just ventral of it; prodorsum lacking condyles of enantiophyses. Humeral processes with ornate microsculpture of reticulations and striae; apical portion of humeral processes short, not reaching beyond bothridia, medial edge projecting obliquely from dorsosejugal scissure; posterior portion of humeral processes consisting of 2-4 lobes, indicated by thin, semi-transparent cuticle and wavy margin. Notogaster ovoid, with nine pairs of short, smooth setae positioned marginally. Epimeral plates II short and narrow. Pedotectum I with long, stout apical spine; pd II trapezoid or very large, lobe-shaped; discidium lobe-shaped. With six pairs of genital setae, penultimate pair displaced laterally; one pair aggenital setae, two pairs anal setae, three pairs adanal setae. With or without perigenital carina and/or enantiophyses E4. Chelicerae chelate-dentate, of normal proportions. Pre-anal organ oval.
Remarks. Compactozetes can be differentiated from Sadocepheus and Hamotegeus by the different structure of the lamellae. In Compactozetes the anterior lamellae are fused medially with each other, folded ventrally and fused with the rostrum, with large foramina either side of the point of fusion. In Sadocepheus and Hamotegeus the lamellar cusps are free.
Two species groups have been identified: ‘rotoruensis’ which includes C. bundjalung sp. nov., C. pirumorpha sp. nov., C. duonodulus sp. nov. (cf. below), C. niger Hammer, 1966 and C. rotoruensis Hammer, 1966. In this group, pedotectum II is rectangular with a median indentation. Other members of the genus belong to the ‘zeugus’ species group, which includes C. zeugus Luxton, 1988b, C. calderi sp. nov. (cf. below) and C. goongerah sp. nov. (cf. below). These species have a large blade-like pedotectum I with a prominent, straight spine and pedotectum II is in the form of a large lobed or trapezoid process. Pedotectum II of C. hastatus Hammer, 1973 was not illustrated or mentioned in the description.
description: Published as part of Colloff, Matthew J., 2023, The oribatid mite superfamily Eutegaeoidea (Acari, Oribatida), with descriptions of new taxa from Australia and New Caledonia and a re-assessment of genera and families, pp. 1-93 in Zootaxa 5365 (1) on pages 55-56, DOI: 10.11646/zootaxa.5365.1.1, http://zenodo.org/record/10146969
Axe 'Em: Eliminating Spurious States with Induction Axioms (Artifact)
Creators: name: Elad, Neta
name: Shoham, Sharon
Publisher: name: Zenodo
Year: 2024

description: Artifact for the POPL '25 paper "Axe 'Em: Eliminating Spurious States with Induction Axioms".

The artifact is provided as a Docker image, and includes the Python package for the auto-axiomatizer tool, and benchmarks (encoded in Z3's programmatic API). There are two images, `popl25-axe-em-artifact-arm64.tar.gz` (for Mac M1/M2/M3) and `popl25-axe-em-artifact-amd64.tar.gz`.

For more details, see the `POPL25-README.md` file.

Note that the run times of the benchmarks inside the container can differ from the times measured (in Table 1).

A new version with a more detailed README (which better documents how to create and test new problems) is available at https://zenodo.org/records/14092340.
Additional file 1 of How to deliver person-centred care for people living with heart failure: a multi stakeholder interview study with patients, caregivers and healthcare professionals in Thailand
Creators: name: Giusti, Alessandra
name: Pukrittayakamee, Panate
name: Wannarit, Kamonporn
name: Thongchot, Lakkana
name: Janwanishstaporn, Satit
name: Nkhoma, Kennedy
name: Venkatapuram, Sridhar
name: Harding, Richard
Publisher: name: figshare
Year: 2024
Subjects: Medicine
Cancer
Science Policy
Mental Health
Computational Biology

description: Supplementary Material 1.
Cologny, Fondation Martin Bodmer, Cod. Bodmer 600b : The Life of Buddha, second book (Shaka no Honji, ge)
Publisher: name: e-codices - Virtual Manuscript Library of Switzerland
Year: 2024

description: The book belongs to the category of nara ehon, a type of polychrome, illustrated narratives published from the Muromachi period though to the first half of the Edo period. The term nara ehon has been widely applied to all illustrated books from these periods since the Meiji era, but its origin is unclear. The format of nara ehon differs, depending on the period. Early examples from the Momoyama to the very early Edo period are tall, measuring about 30 cm in height, a vertical format similar to a European quarto. The examples produced from the Kanei era onwards, within the first half of the Edo period were more of a horizontal proportion. They were also generally based on the genre of otogizōshi, short stories that emerged from the Kamakura period onwards, a majority of them focusing on the Muromachi period. During the latter half of the 17th century, the topic shifted to stories about the aristocracy or the wealthy merchant class, before the popularity nara ehon began to decline. This example can possibly dated to the Keichō era (1596-1615).
description: Online Since: 2016-06-23
title: The Elbtalschiefergebirge – Late Variscan juxtaposition of a marine basin with the exhumed Erzgebirge nappe pile
Creators: name: Schulze, Lea Marie
name: Kroner, Uwe
Publisher: name: Deutsche Geologische Gesellschaft - Geologische Vereinigung e.V. (DGGV)
Year: 2024

description:
The Elbe Zone northeast of the Erzgebirge is an example of the complex architecture of Saxo-Thuringia of the Central European Variscides. Here, low grade lithologies of the Elbtalschiefergebirge preserve the record of Devonian to Early Carboniferous marine sedimentation, which occurred contemporaneously with prolonged subduction-accretion-exhumation tectonics of the Erzgebirge nappe pile. Today, both juxtaposed units are separated by the Mid-Saxon Fault Zone.

Based on tectonic field studies and microstructural investigations, we present a tectonic model for the Elbtalschiefergebirge as follows. As part of the SE-Wrench and Thrust Zone (WTZ), the lithologies of the Elbtalschiefergebirge originated at the passive continental margin of the Gondwana plate eventually affected by the Variscan orogeny. Until the Middle Devonian, the WTZ and the adjacent Autochthonous Domain share a similar geological record of a continuous sedimentation on the inner Peri-Gondwana shelf. Syn-collisional strike slip tectonics of the evolving WTZ started in the Late Devonian separating the Autochthonous Domain and the evolving nappe stack of the Allochthonous Domain northwest and southeast respectively. Differentiation of the WTZ begins with the onset of Late Devonian submarine magmatism and shallow to deep-water sedimentation. The deep-water sediments probably express the start of accretionary tectonics southwest of the Cadomian Lausitz block. Ongoing convergence in the Early Carboniferous resulted in nappe stacking and low-grade metamorphism. Early Carboniferous synorogenic sedimentation of Late Devonian cherts reveals ongoing accretion-exhumation tectonics at this part of the WTZ. Final (N)NW-(S)SE compression is related to the final juxtaposition with the Erzgebirge utilizing the Mid-Saxon Fault Zone.
Cologny, Fondation Martin Bodmer, Cod. Bodmer 601a : Tale of Ise, first book (Ise Monogatari, jō)
Publisher: name: e-codices - Virtual Manuscript Library of Switzerland
Year: 2024

description: The Tale of Ise is one of the earliest and most well-known example of uta monogatari, a subgenre of the monogatari, which focuses on waka poetry with the narrative evolving around the poetry.  Its authorship, as well as the exact date of composition remain unclear, but it is today dated to the early Heian period. It is also known by the title "Zaigo chūjō nikki", or "Diaries of the Prince Ariwara no Narihira". The main character in the Tale of Ise is understood as being the historical prince and poet Ariwara no Narihira (9th century), whose waka feature in the tale. Yet due to the existence of narratives that clearly date to later periods, Narihira himself cannot be regarded as the author. The tale is generally concerned with human affection of many kinds, from amorous affairs to parental affection. Whilst many chapters do have a strong aristocratic notion, it is not limited to the world of nobility, but also includes the commoner’s fate, such as Chapter 23 Tsutsuizutsu. The characters often remain unnamed and are only referred to as ‘the girl’, or ‘the man’. Thus, the tale is interpretable as an effort to generally address the topic of human relationship and affection. This example bound in silk is adorned with illustrations executed in ink, polychromy and gold.
description: Online Since: 2016-06-23
Cologny, Fondation Martin Bodmer, Cod. Bodmer 601b : Tale of Ise, second book (Ise Monogatari, ge)
Publisher: name: e-codices - Virtual Manuscript Library of Switzerland
Year: 2024

description: The Tale of Ise is one of the earliest and most well-known example of uta monogatari, a subgenre of the monogatari, which focuses on waka poetry with the narrative evolving around the poetry.  Its authorship, as well as the exact date of composition remain unclear, but it is today dated to the early Heian period. It is also known by the title "Zaigo chūjō nikki", or "Diaries of the Prince Ariwara no Narihira". The main character in the Tale of Ise is understood as being the historical prince and poet Ariwara no Narihira (9th century), whose waka feature in the tale. Yet due to the existence of narratives that clearly date to later periods, Narihira himself cannot be regarded as the author. The tale is generally concerned with human affection of many kinds, from amorous affairs to parental affection. Whilst many chapters do have a strong aristocratic notion, it is not limited to the world of nobility, but also includes the commoner’s fate, such as Chapter 23 Tsutsuizutsu. The characters often remain unnamed and are only referred to as ‘the girl’, or ‘the man’. Thus, the tale is interpretable as an effort to generally address the topic of human relationship and affection. This example bound in silk is adorned with illustrations executed in ink, polychromy and gold.
description: Online Since: 2016-06-23