cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1 of Starting a conversation about estimands with public partners involved in clinical trials: a co-developed tool
Creators: name: Cro, Suzie
name: Kahan, Brennan C
name: Patel, Akshaykumar
name: Henley, Ania
name: C, Joanna
name: Hellyer, Paul
name: Kumar, Manos
name: Rahman, Yasmin
name: Goulão, Beatriz
Publisher: name: figshare
Year: 2023
Subjects: Medicine
Biotechnology
Developmental Biology
Cancer
Science Policy

description: Additional file 1.
The evolution of the Milky Way: New insights from open clusters
Creators: name: Reddy, Arumalla B. S.
name: Lambert, David L.
name: Giridhar, Sunetra
Publisher: name: arXiv
Year: 2016
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: We have collected high-dispersion echelle spectra of red giant members in the twelve open clusters (OCs) and derived stellar parameters and chemical abundances for 26 species by either line equivalent widths or synthetic spectrum analyses. We confirm the lack of an age-metallicity relation for OCs but argue that such a lack of trend for OCs arise from the limited coverage in metallicity compared to that of field stars which span a wide range in metallicity and age. We confirm that the radial metallicity gradient of OCs is steeper (flatter) for Rgc < 12 kpc (> 12 kpc). We demonstrate that the sample of clusters constituting a steep radial metallicity gradient of slope $-$0.052$\pm$0.011 dex kpc$^{-1}$ at Rgc < 12 kpc are younger than 1.5 Gyr and located close to the Galactic midplane (|z| < 0.5 kpc) with kinematics typical of the thin disc. Whereas the clusters describing a shallow slope of $-$0.015$\pm$0.007 dex kpc$^{-1}$ at Rgc > 12 kpc are relatively old, thick disc members with a striking spread in age and height above the midplane (0.5 < |z| < 2.5 kpc). Our investigation reveals that the OCs and field stars yield consistent radial metallicity gradients if the comparison is limited to samples drawn from the similar vertical heights. We argue via the computation of Galactic orbits that all the outer disc clusters were actually born inward of 12 kpc but the orbital eccentricity has taken them to present locations very far from their birthplaces.
description: 18 pages, 8 figures, 16 tables (available online), Accepted for publication in MNRAS
From Intent to Impact-The Decline of Broader Impacts throughout an NSF Project Life-Cycle
Creators: name: Woodson, Thomas
name: Boutilier, Sophia
Publisher: name: Zenodo
Year: 2022

description: Our findings indicate a systematic decline in impacts from the proposal stage, abstracts, to the conclusion of the project, project outcome report. Impacts decline in all but four categories (13 of 17) and all but two directorates (5 out of 7). Across the sample, impacts decline by 14%, but the decline is most pronounced when the impacts are intrinsic to the research or targeted at marginalized groups. This finding is troublesome given the NSF’s commitment to broaden participation by engaging underrepresented groups. Grants with inclusive impacts have less funding and prove more difficult to achieve. By contrast, grants report more impact for advantaged groups from the abstract to the POR. From this finding, it appears the interpretation and enforcement of BI policy is not currently serving marginalized groups. This lack not only maintains the status quo, but may hinder the development of scientific thought due to an absence of diversity society. Impacts that serve the general population suffer less attrition than inclusive impacts, but these still make up less than a quarter of impacts achieved by the end of the research period.
Helically Decomposed Turbulence
Creators: name: Alexakis, Alexandros
Publisher: name: arXiv
Year: 2016
Subjects: subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences

description: A decomposition of the energy and helicity fluxes in a turbulent hydrodynamic flow is proposed. The decomposition is based on the projection of the flow to a helical basis that allows to investigate separately the role of interactions among modes of different helicity. The proposed formalism is then applied in large scale numerical simulations of a non-helical and a helical flow, where the decomposed fluxes are explicitly calculated. It is shown that the total energy flux can be split in to three fluxes that independently remain constant in the inertial range. One of these fluxes that corresponds to the interactions of fields with the same helicity is negative implying the presence of an inverse cascade that is `hidden' inside the forward cascade. Similar to the energy flux the helicity flux is also shown that it can be decomposed to two fluxes that remain constant in the inertial range. Implications of these results as well possible new directions for investigations are discussed.
A single strontium Rydberg ion confined in a Paul trap
Creators: name: Higgins, Gerard
name: Li, Weibin
name: Pokorny, Fabian
name: Zhang, Chi
name: Kress, Florian
name: Maier, Christine
name: Haag, Johannes
name: Bodart, Quentin
name: Lesanovsky, Igor
name: Hennrich, Markus
Publisher: name: arXiv
Year: 2016
Subjects: subject: Quantum Physics (quant-ph)
subject: Atomic Physics (physics.atom-ph)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Trapped Rydberg ions are a promising new system for quantum information processing. They have the potential to join the precise quantum operations of trapped ions and the strong, long-range interactions between Rydberg atoms. Technically, the ion trap will need to stay active while exciting the ions into the Rydberg state, else the strong Coulomb repulsion will quickly push the ions apart. Thus, a thorough understanding of the trap effects on Rydberg ions is essential for future applications. Here we report the observation of two fundamental trap effects. First, we investigate the interaction of the Rydberg electron with the quadrupolar electric trapping field. This effect leads to Floquet sidebands in the spectroscopy of Rydberg D-states whereas Rydberg S-states are unaffected due to their symmetry. Second, we report on the modified trapping potential in the Rydberg state compared to the ground state which results from the strong polarizability of the Rydberg ion. We observe the resultant energy shifts as a line broadening which can be suppressed by cooling the ion to the motional ground state in the directions orthogonal to the excitation laser.
Supplementary Table 2. Detection of avian influenza virus nucleoprotein (NP) specific antibodies in 2014 and 2015. from Migratory patterns of two major influenza virus host species on tropical islands
Creators: name: Lebarbenchon, Camille
name: Boucher, Solenn
name: Feare, Chris
name: Dietrich, Muriel
name: Larose, Christine
name: Humeau, Laurence
name: Le Corre, Matthieu
name: Jaeger, Audrey
Publisher: name: The Royal Society
Year: 2023
Subjects: subject: Ecology
subject: FOS: Biological sciences

description: Animal migration is a major driver of infectious agent dispersal. Duck and seabird migrations, for instance, play a key role in the spatial transmission dynamics and gene flow of avian influenza viruses (AIV), worldwide. On tropical islands, brown and lesser noddies (Anous stolidus and A. tenuirostris) may be important AIV hosts, but the lack of knowledge on their migratory behaviour limits our understanding of virus circulation in island networks. Here we show that high connectivity between islands generated by non-breeding dispersive behaviours may be a major driver in the spread and the maintenance of AIV among tropical islands of the Western Indian Ocean. Tracking data highlight two types of dispersive behaviours during the non-breeding season: birds either staying in the vicinity of their breeding ground (on Bird Island, Seychelles), or moving to and roosting on other islands in the Western Indian Ocean. Migrant birds used a wide range of roosting places from the Tanzanian coasts to the Maldives archipelago and Tromelin Island. Epidemiological data confirm that brown and lesser noddies are major hosts for AIV, although significant variations of seroprevalence between species suggest that other biological and ecological drivers could be involved in virus infection and transmission dynamics.
Melanotaenia manibuii Nugraha, Kadarusman, Hubert, Avarre, Hadiaty, Slembouck, Carman, Sudarto, Ogistira & Pouyaud, 2015, sp. nov.
Creators: name: Nugraha, Media Fitri Isma
name: Kadarusman
name: Hubert, Nicolas
name: Avarre, Jean-Christophe
name: Hadiaty, Renny K.
name: Slembouck, Jacques
name: Carman, Odang
name: Sudarto
name: Ogistira, Ran
name: Pouyaud, Laurent
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Atheriniformes
Melanotaeniidae
Melanotaenia
Melanotaenia manibuii

description: Melanotaenia manibuii, sp. nov.   Kadarusman, Slembrouck & Pouyaud
(Fig. 20; Tab. XI)
description: Published as part of Nugraha, Media Fitri Isma, Kadarusman, Hubert, Nicolas, Avarre, Jean-Christophe, Hadiaty, Renny K., Slembouck, Jacques, Carman, Odang, Sudarto, Ogistira, Ran & Pouyaud, Laurent, 2015, Eight new species of Rainbowfishes (Melanotaeniidae) from the Birds Head Region, West Papua, Indonesia, pp. 99-130 in Cybium 39 (2) on page 118, DOI: 10.26028/cybium/2015-392-003, http://zenodo.org/record/13613884
Correlation between Macroscopic and Microscopic Relaxation Dynamics of Water: Evidence for Two Liquid Forms
Creators: name: Vinh, Nguyen Q.
name: Doan, Luan C.
name: Hoang, Ngoc L. H.
name: Cui, Jiarong R.
name: Sindle, Ben
Publisher: name: arXiv
Year: 2023
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: Water is vital for life, and without it biomolecules and cells cannot maintain their structures and functions. The remarkable properties of water originate from its ability to form hydrogen-bonding networks and dynamics, which the connectivity constantly alters because of the orientation rotation of individual water molecules. Experimental investigation of the dynamics of water, however, has proven challenging due to the strong absorption of water at terahertz frequencies. In response, by employing a high-precision terahertz spectrometer, we have measured and characterized the terahertz dielectric response of water from supercooled liquid to near the boiling point to explore the motions. The response reveals dynamic relaxation processes corresponding to the collective orientation, single-molecule rotation, and structural rearrangements resulting from breaking and reforming hydrogen bonds in water. We have observed the direct relationship between the macroscopic and microscopic relaxation dynamics of water, and the results have provided evidence of two liquid forms in water with different transition temperatures and thermal activation energies. The results reported here thus provide an unprecedented opportunity to directly test microscopic computational models of water dynamics.
Mobility footprints: A notation method for studying researcher moves
Creators: name: Dudek, Jonathan
name: Van Hoed, Miriam
name: Núñez López, Lidia
name: Costas, Rodrigo
Publisher: name: Zenodo
Year: 2022

description: In this paper we propose a framework for notating and organizing the various mobility events that can be deduced from bibliometric affiliation data. This approach allows for the large-scale analysis of researcher mobility at the level of researcher addresses and is more versatile than previous attempts. It is an important step towards indicators of researcher in- and outflows and of residing researchers, with researchers including any kind of publishing author. Limitations of this approach can be the completeness of the database used and the quality of the disambiguation of authors. Also, mobility can only be captured for those researchers who have actually been active as authors. Next, we will apply the method to Microsoft Academic Graph data, convert affiliation information into footprints, and create and calculate indicators to map global researcher mobility. Alongside this, we plan to share the SQL-code for the creation of the footprints and indicators, as well as the in- and output data, to allow the application of this method for anyone. Future studies may go beyond the researcher-country combination and include other entities: research organizations, geographical regions, or even journals and fields of science.
Upper Chromospheric Magnetic Field of a Sunspot Penumbra: Observations of Fine Structure
Creators: name: Joshi, J.
name: Lagg, A.
name: Solanki, S. K.
name: Feller, A.
name: Collados, M.
name: Suárez, D. Orozco
name: Schlichenmaier, R.
name: Franz, M.
name: Balthasar, H.
name: Denker, C.
name: Berkefeld, T.
name: Hofmann, A.
name: Kiess, C.
name: Nicklas, H.
name: Yabar, A. Pastor
name: Rezaei, R.
name: Schmidt, D.
name: Schmidt, W.
name: Sobotka, M.
name: Soltau, D.
name: Staude, J.
name: Strassmeier, K. G.
name: Volkmer, R.
name: von der Lühe, O.
name: Waldmann, T.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: The fine-structure of magnetic field of a sunspot penumbra in the upper chromosphere is to be explored and compared to that in the photosphere. High spatial resolution spectropolarimetric observations were recorded with the 1.5-meter GREGOR telescope using the GREGOR Infrared Spectrograph (GRIS). The observed spectral domain includes the upper chromospheric He I triplet at 1083.0 nm and the photospheric Si I 1082.7 nm and Ca I 1083.3 nm spectral lines. The upper chromospheric magnetic field is obtained by inverting the He I triplet assuming a Milne-Eddington type model atmosphere. A height dependent inversion was applied to the Si I 1082.7 nm and Ca I 1083.3 nm lines to obtain the photospheric magnetic field. We find that the inclination of the magnetic field shows variations in the azimuthal direction both in the photosphere, but also in the upper chromosphere. The chromospheric variations remarkably well coincide with the variations in the inclination of the photospheric field and resemble the well-known spine and inter-spine structure in the photospheric layers of penumbrae. The typical peak-to-peak variations in the inclination of the magnetic field in the upper chromosphere is found to be 10-15 degree, i.e., roughly half the variation in the photosphere. In contrast, the magnetic field strength of the observed penumbra does not show variations on small spatial scales in the upper chromosphere. Thanks to the high spatial resolution observations possible with the GREGOR telescope at 1.08 microns, we find that the prominent small-scale fluctuations in the magnetic field inclination, which are a salient part of the property of sunspot penumbral photospheres, also persist in the chromosphere, although at somewhat reduced amplitudes. Such a complex magnetic configuration may facilitate penumbral chromospheric dynamic phenomena, such as penumbral micro-jets or transient bright dots.
description: 8 pages, 7 figures, accepted for publication in A&A
$KMR$ $k_t$-factorization procedure for the description of the $LHCb$ forward hadron-hadron $Z^0$ production at $\sqrt{s}=13\;TeV$
Creators: name: Modarres, M.
name: Masouminia, M. R.
name: Nik, R. Aminzadeh
Publisher: name: arXiv
Year: 2016
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Quit recently, two sets of new experimental data from the $LHCb$ and the $CMS$ collaborations have been published, concerning the production of the $Z^0$ vector boson in hadron-hadron collisions with the center-of-mass energy $E_{CM}= \sqrt{s}=13\;TeV$. On the other hand, in our recent work, we have conducted a set of $NLO$ calculations for the production of the electroweak gauge vector bosons, utilizing the unintegrated parton distribution functions ($UPDF$) in the frameworks of $Kimber$-$Martin$-$Ryskin$ ($KMR$) or $Martin$-$Ryskin$-$Watt$ ($MRW$) and the $k_t$-factorization formalism, concluding that the results of the $KMR$ scheme are arguably better in describing the existing experimental data, coming from $D0$, $CDF$, $CMS$ and $ATLAS$ collaborations. In the present work, we intend to follow the same $NLO$ formalism and calculate the rate of the production of the $Z^0$ vector boson, utilizing the $UPDF$ of $KMR$ within the dynamics of the recent data. It will be shown that our results are in good agreement with the new measurements of the $LHCb$ and the $CMS$ collaborations.
description: 3 figures
Supplementary Figure 1 and 2. Kernel density distribution (migrant birds) and serological status. from Migratory patterns of two major influenza virus host species on tropical islands
Creators: name: Lebarbenchon, Camille
name: Boucher, Solenn
name: Feare, Chris
name: Dietrich, Muriel
name: Larose, Christine
name: Humeau, Laurence
name: Le Corre, Matthieu
name: Jaeger, Audrey
Publisher: name: The Royal Society
Year: 2023
Subjects: subject: Ecology
subject: FOS: Biological sciences

description: Animal migration is a major driver of infectious agent dispersal. Duck and seabird migrations, for instance, play a key role in the spatial transmission dynamics and gene flow of avian influenza viruses (AIV), worldwide. On tropical islands, brown and lesser noddies (Anous stolidus and A. tenuirostris) may be important AIV hosts, but the lack of knowledge on their migratory behaviour limits our understanding of virus circulation in island networks. Here we show that high connectivity between islands generated by non-breeding dispersive behaviours may be a major driver in the spread and the maintenance of AIV among tropical islands of the Western Indian Ocean. Tracking data highlight two types of dispersive behaviours during the non-breeding season: birds either staying in the vicinity of their breeding ground (on Bird Island, Seychelles), or moving to and roosting on other islands in the Western Indian Ocean. Migrant birds used a wide range of roosting places from the Tanzanian coasts to the Maldives archipelago and Tromelin Island. Epidemiological data confirm that brown and lesser noddies are major hosts for AIV, although significant variations of seroprevalence between species suggest that other biological and ecological drivers could be involved in virus infection and transmission dynamics.
The weak coupling limit for the random Schrödinger equation: The average wave function
Creators: name: Chen, Thomas
name: Komorowski, Tomasz
name: Ryzhik, Lenya
Publisher: name: arXiv
Year: 2016
Subjects: subject: Mathematical Physics (math-ph)
subject: Analysis of PDEs (math.AP)
subject: FOS: Physical sciences
subject: FOS: Mathematics
subject: 81Q10, 76Y05

description: We consider the Schrödinger equation with a time-independent weakly random potential of a strength $ε\ll 1$, with Gaussian statistics. We prove that when the initial condition varies on a scale much larger than the correlation length of the potential, the compensated wave function converges to a deterministic limit on the time scale $t\simε^{-2}$. This is shown under the sharp assumption that the correlation function $R(x)$ of the random potential decays slower than $1/|x|^2$, which ensures that the effective potential is finite. When $R(x)$ decays slower than $1/|x|^2$ we establish an anomalous diffusive behavior for the averaged wave function on a time scale shorter than $ε^{-2}$, as long as the initial condition is "sufficiently macroscopic". We also consider the kinetic regime when the initial condition varies on the same scale as the random potential and obtain the limit of the averaged wave function for potentials with the correlation functions decaying faster than $1/|x|^2$. We use random potentials of the Schonberg class which allows us to bypass the oscillatory phase estimates.
description: Latex, 37 pages
Additional file 1 of Promoting physical activity through supervised vs motivational behavior change interventions in breast cancer survivors on aromatase inhibitors (PAC-WOMAN): protocol for a 3-arm pragmatic randomized controlled trial
Creators: name: Carraça, Eliana V.
name: Rodrigues, Bruno
name: Franco, Sofia
name: Nobre, Inês
name: Jerónimo, Flávio
name: Ilharco, Vítor
name: Gabriel, Fernanda
name: Ribeiro, Leonor
name: Palmeira, António L.
name: Silva, Marlene N.
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Cancer

description: Additional file 1.
Additional file 1 of The use of alpha 1 thymosin as an immunomodulator of the response against SARS-Cov2
Creators: name: Espinar-Buitrago, M. S.
name: Tarancon-Diez, L.
name: Vazquez-Alejo, E.
name: Magro-Lopez, E.
name: Genebat, M.
name: Romero-Candau, F.
name: Leal, M.
name: Muñoz-Fernandez, M. A.
Publisher: name: figshare
Year: 2023
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 1. Fold change in DCs immunophenotyping. Scatter plot and fold change represents the difference between α1Thy treated condition and untreated condition in the marker expression on total DCS: CD40; CD80; TIM-3; PDL-1(A.1-D.1); intracellular production of TNFα(E.1) and intensity of fluorescence of HLADR(F:1). On mDCs: CD40; CD80; TIM-3; PDL-1(A.2-D.2); intracellular production of TNFα (E.2) and intensity of fluorescence of HLADR(F:2). On pDCs: CD40; CD80; TIM-3; PDL-1(A.3-D.3); intracellular production of TNFα(E.3) and intensity of fluorescence of HLADR(F.3). The medians with the interquartile ranges are shown. Ex-vivo: Ex-vivo condition; UT: Untreated condition; α1Thy: α1Thy treated condition. Each dot represents an individual. Orange dots represent < 40 years (n = 18) and > 65 years (n = 16) are highlighted with blue dots. U-Mann Whitney test was used comparing condition between different group (ns: no statistically significative, θ: p > 0.05 and < 0.1 *p < 0.05; **p < 0.01; ***p < 0.001).
Pattern Formation by Electric-field Quench in Mott Crystal
Creators: name: Gauquelin, Nicolas
name: Forte, Filomena
name: Jannis, Daen
name: Fittipaldi, Rosalba
name: Autieri, Carmine
name: Cuono, Giuseppe
name: Granata, Veronica
name: Lettieri, Mariateresa
name: Noce, Canio
name: Granozio, Fabio Miletto
name: Vecchione, Antonio
name: Verbeeck, Johan
name: Cuoco, Mario
Publisher: name: arXiv
Year: 2023
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: The control of Mott phase is intertwined with the spatial reorganization of the electronic states. Out-of-equilibrium driving forces typically lead to electronic patterns that are absent at equilibrium, whose nature is however often elusive. Here, we unveil a nanoscale pattern formation in the Ca$_2$RuO$_4$ Mott insulator. We demonstrate how an applied electric field spatially reconstructs the insulating phase that, uniquely after switching off the electric field, exhibits nanoscale stripe domains. The stripe pattern has regions with inequivalent octahedral distortions that we directly observe through high-resolution scanning transmission electron microscopy. The nanotexture depends on the orientation of the electric field, it is non-volatile and rewritable. We theoretically simulate the charge and orbital reconstruction induced by a quench dynamics of the applied electric field providing clear-cut mechanisms for the stripe phase formation. Our results open the path for the design of non-volatile electronics based on voltage-controlled nanometric phases.
description: 14 pages, 9 figures
Beyond density: municipal expenditures and the shape and location of development
Creators: name: Rolheiser, Lyndsey A.
name: Dai, Chengzhen
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: Developmental Biology
subject: Marine Biology
subject: Science Policy
subject: Plant Biology

description: A clear understanding of the relationship between development patterns and municipal expenditures is complicated by how one chooses to quantify these patterns. Extant literature often employs a single density measure to capture the low-density nature of sprawl. While density provides an intuitive link to economies of scale and congestion costs, it fails to capture other spatial characteristics of sprawl related to centrality, connectedness, and mixed use that may influence municipal expenditures according to Smart Growth and New Urbanism advocates. This study uses Massachusetts orthoimagery data to construct multidimensional measures of residential and commercial land use patterns. Municipal expenditures associated with public works, fire, and police are regressed on multidimensional measures of land use as well as a number of demand controls. Findings indicate that economies and diseconomies do exist with respect to the multidimensional metrics considered. Support is mixed for development patterns emphasized by Smart Growth and New Urbanism advocates.
Additional file 2 of The use of alpha 1 thymosin as an immunomodulator of the response against SARS-Cov2
Creators: name: Espinar-Buitrago, M. S.
name: Tarancon-Diez, L.
name: Vazquez-Alejo, E.
name: Magro-Lopez, E.
name: Genebat, M.
name: Romero-Candau, F.
name: Leal, M.
name: Muñoz-Fernandez, M. A.
Publisher: name: figshare
Year: 2023
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 2. Fold change on total and memory CD4 + and CD8 + T lymphocytes. Scatter plot and fold change represents the difference between the SARS-CoV2 peptide-stimulated and α1Thy-pretreated condition and the SARS-CoV2 peptide-stimulated condition of cytokine production in total CD4 TLs: TNFα(A.1), IFNγ(B.1) and IL-2(C.1) and total CD8 TLs: TNFα(D.1), IFNγ(E.1) and IL-2(F.1); in memory CD4 TLs (CM,EM and TEMRA): TNFα(A.2-A.4); IFNγ(B.2-B.4); IL-2(C.2-C.4) and in memory CD8 TLs (CM,EM and TEMRA): TNFα(D.2-D.4); IFNγ(E.2-E.4); IL-2(F.2-F.4): The medians with the interquartile ranges are shown. Ex-vivo: Ex-vivo condition; UT: Untreated condition; α1Thy: α1Thy treated condition; SARS-CoV2: SARS-CoV2 peptides stimulation condition; α1Thy + SARS-CoV2: α1Thy treated and SARS-CoV2 peptides stimulation condition. Each dot represents an individual. Orange dots represent < 40 years (n = 18) and > 65 years (n = 16) are highlighted with blue dots. Memory populations represented in green (CM), in violet (EM) and in rose (TEMRA). Wilcoxon test was used comparing condition in the same group and U-Mann Whitney test was used comparing condition between different group (ns: not statistically significative, θ: p > 0.05 and < 0.1 *p < 0.05; **p < 0.01; ***p < 0.001).
Additional file 3 of The use of alpha 1 thymosin as an immunomodulator of the response against SARS-Cov2
Creators: name: Espinar-Buitrago, M. S.
name: Tarancon-Diez, L.
name: Vazquez-Alejo, E.
name: Magro-Lopez, E.
name: Genebat, M.
name: Romero-Candau, F.
name: Leal, M.
name: Muñoz-Fernandez, M. A.
Publisher: name: figshare
Year: 2023
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 3. Polyfunctionality in memory CD4 + and CD8 + T cells. Polyfunctionality patterns of CD4 + and CD8 + memory T cells response to SARS-CoV2 producing one (green), two (blue) or three (orange) functions (combination of TNFα, IFNγ and IL-2) among the different condition (with or without α1Thy treatment) for < 40 years’ group in memory CD4 TLs (CM, EM and TEMRA) (A.1-A-A.6) and in memory CD8 TLs (CM, EM and TEMRA) (B.1-B.6) and for > 65 years in memory CD4 TLs (CM, EM and TEMRA) (C.1-A-C.6) and in memory CD8 TLs (CM, EM and TEMRA) (D.1-D.6).
Towards Semi-supervised Universal Graph Classification
Creators: name: Luo, Xiao
name: Zhao, Yusheng
name: Qin, Yifang
name: Ju, Wei
name: Zhang, Ming
Publisher: name: arXiv
Year: 2023
Subjects: subject: Machine Learning (cs.LG)
subject: Artificial Intelligence (cs.AI)
subject: Information Retrieval (cs.IR)
subject: Social and Information Networks (cs.SI)
subject: FOS: Computer and information sciences

description: Graph neural networks have pushed state-of-the-arts in graph classifications recently. Typically, these methods are studied within the context of supervised end-to-end training, which necessities copious task-specific labels. However, in real-world circumstances, labeled data could be limited, and there could be a massive corpus of unlabeled data, even from unknown classes as a complementary. Towards this end, we study the problem of semi-supervised universal graph classification, which not only identifies graph samples which do not belong to known classes, but also classifies the remaining samples into their respective classes. This problem is challenging due to a severe lack of labels and potential class shifts. In this paper, we propose a novel graph neural network framework named UGNN, which makes the best of unlabeled data from the subgraph perspective. To tackle class shifts, we estimate the certainty of unlabeled graphs using multiple subgraphs, which facilities the discovery of unlabeled data from unknown categories. Moreover, we construct semantic prototypes in the embedding space for both known and unknown categories and utilize posterior prototype assignments inferred from the Sinkhorn-Knopp algorithm to learn from abundant unlabeled graphs across different subgraph views. Extensive experiments on six datasets verify the effectiveness of UGNN in different settings.
description: Accepted by IEEE Transactions on Knowledge and Data Engineering (TKDE 2023)
Pesco Pest Control in Johor Bahru
Creators: name: Pesco
Publisher: name: Zenodo
Year: 2022

description: According to pest control in Johor Bahru, pest control is the process of managing and preventing pests, such as insects, rodents, and weeds, from causing damage to crops or humans. It can be done through a variety of methods, including physical barriers, traps, chemicals, and biological control. While pest control is often associated with the use of harmful pesticides, there are many environmentally-friendly methods of pest control that are just as effective. For example, physical barriers such as nets and fencing can be used to keep pests away from crops, and traps can be used to humanely capture and remove pests from an area. Biological control involves using other living organisms to control pests, such as by introducing natural predators or parasites into the environment. With proper planning and execution, pest control can be an effective way to protect crops and humans from the damaging effects of pests.
Additional file 4 of The use of alpha 1 thymosin as an immunomodulator of the response against SARS-Cov2
Creators: name: Espinar-Buitrago, M. S.
name: Tarancon-Diez, L.
name: Vazquez-Alejo, E.
name: Magro-Lopez, E.
name: Genebat, M.
name: Romero-Candau, F.
name: Leal, M.
name: Muñoz-Fernandez, M. A.
Publisher: name: figshare
Year: 2023
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 4. DCs and T-cells gating strategy from a donor. DCs gating strategy and pseudocolor plot representation of surface markers expression CD40, CD80, PDL1, TIM-3, TNFα production and HLADR intensity fluorescence histogram (A.1-A.7). T-cell gating strategy and pseudocolor plot representation of intracellular cytokine production TNFα, IFNγ, IL-2 and surface marker expression CD40L and PD1 (B.1-B.6). UT: untreated condition (red); α1Thy: α1Thy treated condition (blue); SARS-CoV2: SARS-CoV2 peptides stimulated condition (red); α1Thy + SARCoV2: α1Thy treated and SARS-CoV2 peptides stimulated condition (blue).
Fe K and ejecta emission in SNR G15.9+0.2 with XMM-Newton
Creators: name: Maggi, Pierre
name: Acero, Fabio
Publisher: name: arXiv
Year: 2016
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: Aims: We present a study of the Galactic supernova remnant SNR G15.9+0.2 with archival XMM-Newton observations. Methods: EPIC data are used to investigate the morphological and spectral properties of the remnant, searching in particular for supernova ejecta and Fe K line emission. By comparing the SNR's X-ray absorption column density with the atomic and molecular gas distribution along the line of sight, we attempt to constrain the distance to the SNR. Results: Prominent line features reveal the presence of ejecta. Abundance ratios of Mg, Si, S, Ar, and Ca strongly suggest that the progenitor of SNR G15.9+0.2 was a massive star with a main sequence mass likely in the range 20-25 $M_{\odot}$, strengthening the physical association with a candidate central compact object detected with Chandra. Using EPIC's collective power, Fe K line emission from SNR G15.9+0.2 is detected for the first time. We measure the line properties and find evidence for spatial variations. We discuss how the source fits within the sample of SNRs with detected Fe K emission and find that it is the core-collapse SNR with the lowest Fe K centroid energy. We also present some caveats regarding the use of Fe K line centroid energy as a typing tool for SNRs. Only a lower limit of 5 kpc is placed on the distance to SNR G15.9+0.2, constraining its age to $t_{SNR} \gtrsim 2$ kyr.
description: Accepted for publication in Astronomy and Astrophysics. 11 pages, 9 figures, 4 tables
Investigating the correlations of flow harmonics in 2.76A TeV Pb--Pb collisions
Creators: name: Zhu, Xiangrong
name: Zhou, You
name: Xu, Haojie
name: Song, Huichao
Publisher: name: arXiv
Year: 2016
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: This proceeding briefly summarizes our recent investigations on the correlations of flow harmonics in 2.76A TeV Pb--Pb collisions with viscous hydrodynamics {\tt VISH2+1}. We calculated both the symmetric cumulants $SC^{v}(m, n)$ and the normalized symmetric cumulants $NSC^{v}(m, n)$, and found $v_{2}$ and $v_{4}$, $v_{2}$ and $v_{5}$, $v_{3}$ and $v_{5}$ are correlated, $v_{2}$ and $v_{3}$, $v_{3}$ and $v_{4}$ are anti-correlated. We also found $NSC^{v}(3, 2)$ are insensitive to the QGP viscosity, which are mainly determined by the initial conditions.
description: SQM2016 proceeding, 4pages, 2 figures
Additional file 1 of Clinically important change for the FACIT-Fatigue scale in paroxysmal nocturnal hemoglobinuria: a derivation from international PNH registry patient data
Creators: name: Cella, David
name: Johansson, Peter
name: Ueda, Yasutaka
name: Tomazos, Ioannis
name: Gustovic, Philippe
name: Wang, Alice
name: Patel, Ami S.
name: Schrezenmeier, Hubert
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Molecular Biology
classificationCode: 59999
subject: Environmental Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Cancer

description: Additional file 1: Table S1. Demographics and Baseline Disease Characteristics.
Di-J/psi production at the Tevatron and the LHC
Creators: name: Lansberg, Jean-Philippe
name: Shao, Hua-Sheng
Publisher: name: arXiv
Year: 2016
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: We briefly review recent results which we have obtained in the study of J/psi-pair production at the Tevatron and the LHC. We claim that the existing data set from CMS and D0 point at a significant double-parton-scattering contribution with an effective cross section smaller than that for jet-related observables. We have also derived simple relations involving feed-down fractions from excited states which can help in disentangling the single from the double scatterings.
description: 5 pages, 5 figures. LaTeX, uses PoS.cls (included). Contribution to the proceedings of the XXIV International Workshop on Deep-Inelastic Scattering and Related Subject - DIS 2016, 11-15 April 2016, DESY Hamburg, Germany
Quality of African science and the Sustainable Development Goals
Creators: name: Dosso, Mafini
name: Janosov, Milan
name: Zhu, Manran
Publisher: name: Zenodo
Year: 2022

description: This research explores the changing impacts and quality of African scientific publications and provides an assessment of the contribution of African science to the SDGs. Overall, the continent has recorded an improvement in the quality of scientific publications in the last fifteen years. Likewise African scientific production, these changes have remained critically heterogeneous and polarized around a few usual suspects. Nonetheless, in-depth explorations suggest that this pattern does not hold true when focusing on field-level performances, such as what could be observed for the agriculture- and health-related publications of Africa-based researchers. Moreover, the SDG prevalence can differ much at the country and SDG levels, also depending on the impact metrics employed. Furthermore, different methods, including the selected SDGs terms, can affect both the results and the related interpretations about the preparedness of the continent for addressing developmental challenges through science.
title: Revision of the Ocean GCOS ECVs specifications based on regional requirements in the Mediterranean Sea
Creators: name: Reyes, Emma
name: Juza, Mélanie
name: Fernandez-Mora, Angels
name: Zarokanellos, Nikolaos
name: Tintoré, Joaquín
Publisher: name: Balearic Islands Coastal Observing and Forecasting System, SOCIB
Year: 2023
Subjects: subject: Sea Water Temperature
subject: Sea Water Salinity
subject: Oxygen
subject: Chlorophyll
subject: coastal
subject: multi-platform
subject: Mediterranean Sea

description: The objective of this document is to contribute to the revision of the ECVs/EOVs based on user needs for climate monitoring, adaptation and mitigation related to the Mediterranean Sea in response to a request by the OOPC panel (https://gcos.wmo.int/en/ocean-observations-physics-and-climate-panel).The edition of the specification sheet for each variable described in this document is based on those already provided by GCOS as available in the document entitled ‘The 2022 GCOS ECVs Requirements’ (https://library.wmo.int/doc_num.php?explnum_id=11318), which included a revision of the old GOOS EOV specification sheets, provided  in this link (https://www.goosocean.org/index.php?option=com_content&view=article&id=14&Itemid=114). Following the requirements in these specification sheets, it has included the needs related to the Mediterranean Sea considering values that, if achieved, would result in a significant improvement for regional applications.
Following the requirements in these specification sheets, it has included the needs related to the Mediterranean Sea considering values that, if achieved, would result in a significant improvement for regional applications.
Left-right model for dark matter
Creators: name: Dong, P. V.
name: Huong, D. T.
Publisher: name: arXiv
Year: 2016
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We argue that dark matter can automatically arise from a gauge theory that possesses a non-minimal left-right gauge symmetry, SU(3)_C \otimes SU(M)_L \otimes SU(N)_R \otimes U(1)_X, for (M,N) = (2,3), (3,2), (3,3), \cdots, and (5,5).
description: 8 pages
Additional file 1 of Delivering the precision oncology paradigm: reduced R&D costs and greater return on investment through a companion diagnostic informed precision oncology medicines approach
Creators: name: Henderson, Raymond H.
name: French, Declan
name: Stewart, Elaine
name: Smart, Dave
name: Idica, Adam
name: Redmond, Sandra
name: Eckstein, Markus
name: Clark, Jordan
name: Sullivan, Richard
name: Keeling, Peter
name: Lawler, Mark
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: Additional file 1: Table S1: Probability of success of precision and non-precisiononcology medicines. Table S2:Oncology medicines, their CDxs, and clinical indications. Table S3:Oncology medicines, their clinical trials, cost, and revenue. FigureS1: Difference in research and development spendbetween precision and non-precision oncology medicines. FigureS2: Number of precision versus non-precision medicines launched from our sample.
A Dipole on the Sky: Predictions for Hypervelocity Stars from the Large Magellanic Cloud
Creators: name: Boubert, Douglas
name: Evans, N. W.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: We predict the distribution of hypervelocity stars (HVSs) ejected from the Large Magellanic Cloud (LMC), under the assumption that the dwarf galaxy hosts a central massive black hole (MBH). For the majority of stars ejected from the LMC the orbital velocity of the LMC has contributed a significant fraction of their galactic rest frame velocity, leading to a dipole density distribution on the sky. We quantify the dipole using spherical harmonic analysis and contrast with the monopole expected for HVSs ejected from the Galactic Center. There is a tendril in the density distribution that leads the LMC which is coincident with the well-known and unexplained clustering of HVSs in the constellations of Leo and Sextans. Our model is falsifiable, since it predicts that Gaia will reveal a large density of HVSs in the southern hemisphere.
description: 6 pages, ApJ (Letters), in press
Additional file 1 of Statistical analysis of organelle movement using state-space models
Creators: name: Nishio, Haruki
name: Hirano, Satoyuki
name: Kodama, Yutaka
Publisher: name: figshare
Year: 2023
Subjects: subject: Biophysics
subject: Space Science
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
classificationCode: 69999
subject: Biological Sciences not elsewhere classified
classificationCode: 19999
subject: Mathematical Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Plant Biology

description: Additional file 1: Fig. S1. Estimation of the start time of chloroplast accumulation response using three approaches for a chloroplast in cell 2. Fig. S2. Estimation of the start time of chloroplast accumulation response using three approaches for a chloroplast in cell 3. Fig. S3. Estimation of the start time of chloroplast accumulation response using three approaches for a chloroplast in cell 4. Fig. S4. Application of the developed method to the accumulation response of a nucleus in a cell. Fig. S5. Application of the developed method to a simulated data of the Paramecium escape response to laser heating.
2-Variable Frobenius Problem in Z[\sqrt M]
Creators: name: Kim, Doyon
Publisher: name: arXiv
Year: 2016
Subjects: subject: Number Theory (math.NT)
subject: FOS: Mathematics
subject: 11D07, 11R11, 16B99

description: Suppose that m is a positive integer, not a perfect square. We present a formula solution to the 2-variable Frobenius problem in Z[\sqrt m] of the "first kind" ([3]).
description: 15 pages. Published in the International Journal of Mathematics and Computer Science
On $L$-packets and depth for $SL_2(K)$ and its inner form
Creators: name: Aubert, Anne-Marie
name: Mendes, Sergio
name: Plymen, Roger
name: Solleveld, Maarten
Publisher: name: arXiv
Year: 2016
Subjects: subject: Representation Theory (math.RT)
subject: FOS: Mathematics
subject: 22E50, 20G25

description: We consider the group $SL_2(K)$, where $K$ is a local non-archimedean field of characteristic two. We prove that the depth of any irreducible representation of $SL_2 (K)$ is larger than the depth of the corresponding Langlands parameter, with equality if and only if the L-parameter is essentially tame. We also work out a classification of all $L$-packets for $SL_2 (K)$ and for its non-split inner form, and we provide explicit formulae for the depths of their $L$-parameters.
description: 22 pages. This article supercedes arXiv:1402.0184 and arXiv:1302.6038
Additional file 1 of Diversity and characteristics of plant immunity–activating bacteria from Brassicaceae plants
Creators: name: Kaneko, Hiroki
name: Miyata, Fuma
name: Kurokawa, Mari
name: Hashimoto, Kenji
name: Kuchitsu, Kazuyuki
name: Furuya, Toshiki
Publisher: name: figshare
Year: 2023
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Plant Biology

description: Supplementary Material 1
Inner mean-motion resonances with eccentric planets: A possible origin for exozodiacal dust clouds
Creators: name: Faramaz, Virginie
name: Ertel, Steve
name: Booth, Mark
name: Cuadra, Jorge
name: Simmonds, Charlotte
Publisher: name: arXiv
Year: 2016
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: High levels of dust have been detected in the immediate vicinity of many stars, both young and old. A promising scenario to explain the presence of this short-lived dust is that these analogues to the Zodiacal cloud (or exozodis) are refilled in situ through cometary activity and sublimation. As the reservoir of comets is not expected to be replenished, the presence of these exozodis in old systems has yet to be adequately explained. It was recently suggested that mean-motion resonances (MMR) with exterior planets on moderately eccentric ($\mathrm{e_p}\gtrsim 0.1$) orbits could scatter planetesimals on to cometary orbits with delays of the order of several 100 Myr. Theoretically, this mechanism is also expected to sustain continuous production of active comets once it has started, potentially over Gyr-timescales. We aim here to investigate the ability of this mechanism to generate scattering on to cometary orbits compatible with the production of an exozodi on long timescales. We combine analytical predictions and complementary numerical N-body simulations to study its characteristics. We show, using order of magnitude estimates, that via this mechanism, low mass discs comparable to the Kuiper Belt could sustain comet scattering at rates compatible with the presence of the exozodis which are detected around Solar-type stars, and on Gyr timescales. We also find that the levels of dust detected around Vega could be sustained via our proposed mechanism if an eccentric Jupiter-like planet were present exterior to the system's cold debris disc.
description: 15 pages, 12 figures; Accepted for publication in MNRAS
Full analysis of the empirical data on Youth Assembly meeting 2 on the GreenComp - Analysis - 3rd Workshop
Creators: name: Skov Nielsen, Ida
Publisher: name: Zenodo
Year: 2023
Subjects: GreenScent, GreenDeal, Green Education, Green Future, Smart Education

description: This GreenSCENT analysis shows the results emerged during the Youth Design Assembly workshop that took place in November 2022. During the workshop, participants gave valuable feedback and help co-create the Green Competence Framework with experts from the University UNINETTUNO.
Additional file 1 of Mid-phase pinpoint hyperfluorescent spots on fundus fluorescein angiography in acute central retinal artery occlusion – a novel imaging finding
Creators: name: Mangla, Rubble
name: Venkatesh, Ramesh
name: Prabhu, Vishma
name: Acharya, Isha
name: Handa, Ashit
name: Thadani, Atul
name: Joshi, Aishwarya
name: Yadav, Naresh Kumar
name: Chhablani, Jay
Publisher: name: figshare
Year: 2023
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy
subject: Computational Biology

description: Supplementary Material 1