cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
sj-docx-2-smo-10.1177_20503121221135876 – Supplemental material for Willingness to pay for community-based health insurance and associated factors in Ethiopia: A systematic review and meta-analysis
Creators: name: Anbesu, Etsay Woldu
name: Ebrahim, Oumer Abdulkadir
name: Takele, Nigus Desalegn
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: Cardiology
subject: 110599 Dentistry not elsewhere classified
subject: FOS: Clinical medicine
subject: 110305 Emergency Medicine
subject: 110306 Endocrinology
subject: 110308 Geriatrics and Gerontology
subject: 110904 Neurology and Neuromuscular Diseases
subject: 111099 Nursing not elsewhere classified
subject: 111199 Nutrition and Dietetics not elsewhere classified
subject: 111299 Oncology and Carcinogenesis not elsewhere classified
subject: 110314 Orthopaedics
subject: 110604 Sports Medicine
subject: 110315 Otorhinolaryngology
subject: 111702 Aged Health Care
subject: 111403 Paediatrics
subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: 110319 Psychiatry (incl. Psychotherapy)
subject: 111799 Public Health and Health Services not elsewhere classified
subject: 110203 Respiratory Diseases
subject: 160807 Sociological Methodology and Research Methods
subject: FOS: Sociology
subject: 110323 Surgery
subject: 70706 Veterinary Medicine
subject: FOS: Veterinary sciences

description: Supplemental material, sj-docx-2-smo-10.1177_20503121221135876 for Willingness to pay for community-based health insurance and associated factors in Ethiopia: A systematic review and meta-analysis by Etsay Woldu Anbesu, Oumer Abdulkadir Ebrahim and Nigus Desalegn Takele in SAGE Open Medicine
Linked Data & Ontologien – Teil 2: Ontologien
Creators: name: Kasprzik, Anna
Publisher: name: Zenodo
Year: 2018
Subjects: vivode18

description: Einführung in die wichtigsten Begrifflichkeiten rund um die Themen Linked Data und Ontologien inklusive Übung in Ontologie-Erstellung.
The rocky road to introducing new software tools in existing teams. (or how to teach your collegagues to do better)
Creators: name: Lamm, Lukas
Publisher: name: RWTH Aachen University
Year: 2023

description: deRSE23 - Conference for Research Software Engineering in Germany, deRSE23, Paderborn, Germany, 20 Feb 2023 - 21 Feb 2023; 27 Folien (2023). doi:10.5281/zenodo.7664541
ELIXIR Training Platform: Professional skills for managing and exploiting data
Creators: name: Palagi, Patricia
name: Gelder, Celia Van
name: Bellis, Louisa
name: Rustici, Gabriella
Publisher: name: F1000Research
Year: 2017

description: This presentation was part of the ELIXIR Special Track at the joint 25th Annual International Conference on Intelligent Systems for Molecular Biology and the 16th European Conference for Computational Biology (ISMB/ECCB) on 25 July 2017. ELIXIR Track one showcased to delegates the activities and outputs of ELIXIR’s five Platforms (Tools, Data, Interoperability, Compute and Training). Through talks from ELIXIR partners and interactive discussions, delegates saw the services and resources made available via ELIXIR, and how they could engage in and contribute to their development. ELIXIR Track two followed a similar format and showcased the outputs of ELIXIR’s Use Cases (Marine Metagenomics, Plant Sciences, Rare Diseases and Human Data), the Capacity Building programme and Industry Engagement.
sj-docx-1-han-10.1177_15589447221130093 – Supplemental material for Virtual and Augmented Reality in Management of Phantom Limb Pain: A Systematic Review
Creators: name: Eldaly, Abdullah S.
name: Avila, Francisco R.
name: Torres-Guzman, Ricardo A.
name: Maita, Karla C.
name: Garcia, John P.
name: Serrano, Luiza Palmieri
name: Emam, Omar S.
name: Forte, Antonio J.
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: Medicine
subject: 110314 Orthopaedics
subject: FOS: Clinical medicine
subject: 110604 Sports Medicine
subject: FOS: Health sciences

description: Supplemental material, sj-docx-1-han-10.1177_15589447221130093 for Virtual and Augmented Reality in Management of Phantom Limb Pain: A Systematic Review by Abdullah S. Eldaly, Francisco R. Avila, Ricardo A. Torres-Guzman, Karla C. Maita, John P. Garcia, Luiza Palmieri Serrano, Omar S. Emam and Antonio J. Forte in HAND
Additional file 2 of Patient-centered respectful maternity care: a factor analysis contextualizing marginalized identities, trust, and informed choice
Creators: name: Glover, Annie
name: Holman, Carly
name: Boise, Patrick
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Science Policy
subject: Mental Health
subject: Hematology
subject: Infectious Diseases
subject: FOS: Health sciences

description: Supplementary Material 2
Supplemental Material - A Retrospective Study of the Role of Perioperative Serum Albumin and the Albumin-Bilirubin Grade in Predicting Post-Liver Transplant Length of Stay
Creators: name: Wang, Ryan
name: Katz, Daniel
name: Lin, Hung-Mo
name: Ouyang, Yuxia
name: Gal, Jonathan
name: Suresh, Sumanth
name: Labgaa, Ismail
name: Tabrizian, Parissa
name: Demaria, Samuel
name: Zerillo, Jeron
name: Smith, Natalie K.
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: Cardiology
subject: 110323 Surgery
subject: FOS: Clinical medicine

description: Supplemental Material for A Retrospective Study of the Role of Perioperative Serum Albumin and the Albumin–Bilirubin Grade in Predicting Post-Liver Transplant Length of Stay by Ryan Wang, Daniel Katz, Hung-Mo Lin, Yuxia Ouyang, Jonathan Gal, Sumanth Suresh, Ismail Labgaa, Parissa Tabrizian, Samuel Demaria, Jeron Zerillo, and Natalie K. Smith in Seminars in Cardiothoracic and Vascular Anesthesia
Industry Engagement: ELIXIR and Open Innovation
Creators: name: Roman-Garcia, Pablo
Publisher: name: F1000Research
Year: 2017

description: This presentation was part of the ELIXIR Special Track at the joint 25th Annual International Conference on Intelligent Systems for Molecular Biology and the 16th European Conference for Computational Biology (ISMB/ECCB) on 25 July 2017. ELIXIR Track one showcased to delegates the activities and outputs of ELIXIR’s five Platforms (Tools, Data, Interoperability, Compute and Training). Through talks from ELIXIR partners and interactive discussions, delegates saw the services and resources made available via ELIXIR, and how they could engage in and contribute to their development. ELIXIR Track two followed a similar format and showcased the outputs of ELIXIR’s Use Cases (Marine Metagenomics, Plant Sciences, Rare Diseases and Human Data), the Capacity Building programme and Industry Engagement.
ELIXIR Rare Disease Use Case: ELIXIR infrastructure for rare disease research
Creators: name: Roos, Marcos
name: Gut, Ivo
name: Beltran, Sergi
name: Thompson, Rachel
name: Enckevort, David Van
name: Matalonga, Leslie
name: Laurie, Steven
name: Drablos, Finn
name: Coward, Eivind
name: Leskosek, Brane
name: Peterson, Hedi
name: Leida, Ana
name: Evelo, Chris
name: Rath, Ana
name: Hanauer, Marc
name: Lochmuller, Hans
name: Ehrhart, Freddie
name: Carta, Claudio
name: Gelder, Celia Van
Publisher: name: F1000Research
Year: 2017

description: This presentation was part of the ELIXIR Special Track at the joint 25th Annual International Conference on Intelligent Systems for Molecular Biology and the 16th European Conference for Computational Biology (ISMB/ECCB) on 25 July 2017. ELIXIR Track one showcased to delegates the activities and outputs of ELIXIR’s five Platforms (Tools, Data, Interoperability, Compute and Training). Through talks from ELIXIR partners and interactive discussions, delegates saw the services and resources made available via ELIXIR, and how they could engage in and contribute to their development. ELIXIR Track two followed a similar format and showcased the outputs of ELIXIR’s Use Cases (Marine Metagenomics, Plant Sciences, Rare Diseases and Human Data), the Capacity Building programme and Industry Engagement.
Additional file 1 of Exploring the relationship between Treg-mediated risk in COPD and lung cancer through Mendelian randomization analysis and scRNA-seq data integration
Creators: name: Zhang, Dengfeng
name: Liu, Haitao
name: Zhao, Fangchao
name: Guo, Pengfei
name: Li, Jing
name: Lu, Tianxing
name: Li, Zhirong
name: Li, Shujun
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Cancer

description: Supplementary Material 1
Supplemental Material - Caregiver Experiences Navigating the Diagnostic Journey in a Rapidly Progressing Dementia
Creators: name: Sideman, Alissa Bernstein
name: Gilissen, Joni
name: Harrison, Krista L
name: Garrett, Sarah B
name: Terranova, Michael J
name: Ritchie, Christine S
name: Geschwind, Michael D
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 110308 Geriatrics and Gerontology
subject: FOS: Clinical medicine
subject: 110904 Neurology and Neuromuscular Diseases
subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: 110319 Psychiatry (incl. Psychotherapy)
subject: Neuroscience

description: Supplemental Material for Caregiver Experiences Navigating the Diagnostic Journey in a Rapidly Progressing Dementia by Alissa Bernstein Sideman, Joni Gilissen, Krista L Harrison, Sarah B Garrett, Michael J Terranova, Christine S Ritchie, and Michael D Geschwind in Journal of Geriatric Psychiatry and Neurology
Pro-inflammatory cytokine profiles as biomarkers in children with Type 1 diabetes
Creators: name: Ammira Alshabeeb Akil
Publisher: name: F1000Research
Year: 2017

description: Type 1 diabetes studies in human

	In 206 children at T1D onset, we found EV RNA in 30% vs 4% of non-diabetic  controls (OR 11, P<0.001),
	with a higher rate of EV in cases who did not have high risk HLA class II alleles
	recently we have detected EV RNA in 91/356 (26%) of Victorian children at onset of T1D vs controls, these samples are also available for analysis in the present study.

Enteroviruses in the pancreas

	CVB4 was isolated from the pancreas of a child who died a week after  presenting in Diabetes ketoacidosis
	EV RNA was detected in 74% of intestinal biopsies from people with T1D versus 29% of controls, suggesting that EVs also persists in gut mucosa
	EVs isolated from a mother and her son diagnosed with T1D on the same day (CVB5 isolated from both) and from twins, one of whom developed T1D (ECHO 21 isolated), replicated in human islets and caused slowly progressive β-cell lysis.
Activation of Ftz-F1-Responsive Genes through Ftz/Ftz-F1 Dependent Enhancers
Creators: name: Field, Amanda
name: Xiang, Jie
name: Anderson, W. Ray
name: Graham, Patricia
name: Pick, Leslie
Publisher: name: Digital Repository at the University of Maryland
Year: 2016

description: Funding for Open Access provided by the UMD Libraries Open Access Publishing Fund.
description: The orphan nuclear receptor Ftz-F1 is expressed in all somatic nuclei in Drosophila embryos, but mutations result in a pair-rule phenotype. This was explained by the interaction of Ftz-F1 with the homeodomain protein Ftz that is expressed in stripes in the primordia of segments missing in either ftz-f1 or ftz mutants. Ftz-F1 and Ftz were shown to physically interact and coordinately activate the expression of ftz itself and engrailed by synergistic binding to composite Ftz-F1/Ftz binding sites. However, attempts to identify additional target genes on the basis of Ftz-F1/ Ftz binding alone has met with only limited success. To discern rules for Ftz-F1 target site selection in vivo and to identify additional target genes, a microarray analysis was performed comparing wildtype and ftz-f1 mutant embryos. Ftz-F1-responsive genes most highly regulated included engrailed and nine additional genes expressed in patterns dependent on both ftz and ftz-f1. Candidate enhancers for these genes were identified by combining BDTNP Ftz ChIP-chip data with a computational search for Ftz-F1 binding sites. Of eight enhancer reporter genes tested in transgenic embryos, six generated expression patterns similar to the corresponding endogenous gene and expression was lost in ftz mutants. These studies identified a new set of Ftz-F1 targets, all of which are co-regulated by Ftz. Comparative analysis of enhancers containing Ftz/Ftz-F1 binding sites that were or were not bona fide targets in vivo suggested that GAF negatively regulates enhancers that contain Ftz/Ftz-F1 binding sites but are not actually utilized. These targets include other regulatory factors as well as genes involved directly in morphogenesis, providing insight into how pair-rule genes establish the body pattern.
$e^+ e^-$ angularity disributions at NNLL$^\prime$ accuracy
Creators: name: Bell, Guido
name: Hornig, Andrew
name: Lee, Christopher
name: Talbert, Jim
Publisher: name: Deutsches Elektronen-Synchrotron, DESY, Hamburg
Year: 2018
Subjects: scaling: nonperturbative
effect: nonperturbative
model: nonperturbative
CERN LEP Stor
soft collinear effective theory
quantum chromodynamics
event shape analysis
strong coupling
factorization
resummation
thrust
gap

description: We present predictions for the $e^{+}e^{-}$ event shape angularities at NNLL$^{\prime}$ resummed and $\mathcal{O}(\alpha_s^{2})$ matched accuracy and compare them to LEP data at center-of-mass energies $Q=91.2$ GeV and $Q=197$ GeV. We perform the resummation within the framework of Soft-Collinear Effective Theory, and make use of recent results for the two-loop angularity soft function. We determine the remaining NNLL$^{\prime}$ and $\mathcal{O}(\alpha_s^2)$ ingredients from a fit to the EVENT2 generator, and implement a shape function with a renormalon-free gap parameter to model non-perturbative effects. Using values of the strong coupling $\alpha_s(m_Z)$ and the universal non-perturbative shift parameter $\Omega_1$ that are consistent with those obtained in previous fits to the thrust and $C$-parameter distributions, we find excellent agreement between our predictions and the LEP data for all angularities with $a\in[-1,0.5]$. This provides a robust test of the predictions of QCD, factorization, and the universal scaling of the non-perturbative shift across different angularities. Promisingly, our results indicate that current degeneracies in the $\{\alpha_s(m_Z),\Omega_1\}$ parameter space could be be alleviated upon fitting these parameters to experimental data for the angularity distributions.
sj-docx-1-isp-10.1177_00207640231180124 – Supplemental material for The stigma of mental health problems: A cross-sectional study in a representative sample of Spain
Creators: name: González Sanguino, Clara
name: Santos-Olmo, Ana Belén
name: Zamorano, Sara
name: Sánchez-Iglesias, Iván
name: Muñoz López, Manuel
Publisher: name: SAGE Journals
Year: 2023
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: 110319 Psychiatry (incl. Psychotherapy)
subject: FOS: Clinical medicine

description: Supplemental material, sj-docx-1-isp-10.1177_00207640231180124 for The stigma of mental health problems: A cross-sectional study in a representative sample of Spain by Clara González Sanguino, Ana Belén Santos-Olmo, Sara Zamorano, Iván Sánchez-Iglesias and Manuel Muñoz López in International Journal of Social Psychiatry
BBN constraints on MeV-scale dark sectors. Part II. Electromagnetic decays
Creators: name: Hufnagel, Marco
name: Schmidt-Hoberg, Kai
name: Wild, Sebastian
Publisher: name: Deutsches Elektronen-Synchrotron, DESY, Hamburg
Year: 2018

description: Meta-stable dark sector particles decaying into electrons or photons may non-trivially change the Hubble rate, lead to entropy injection into the thermal bath of Standard Model particles and may also photodisintegrate light nuclei formed in the early universe. We study generic constraints from Big Bang Nucleosynthesis on such a setup, with a particular emphasis on MeV-scale particles which are neither fully relativistic nor non-relativistic during all times relevant for Big Bang Nucleosynthesis. We apply our results to a simple model of self-interacting dark matter with a light scalar mediator. This setup turns out to be severely constrained by these considerations in combination with direct dark matter searches and will be fully tested with the next generation of low-threshold direct detection experiments.
sj-docx-1-sms-10.1177_20563051231177920 – Supplemental material for Mapping the Russian Political Influence Ecosystem: The Night Wolves Biker Gang
Creators: name: Boichak, Olga
Publisher: name: SAGE Journals
Year: 2023
Subjects: subject: 200199 Communication and Media Studies not elsewhere classified
subject: FOS: Media and communications

description: Supplemental material, sj-docx-1-sms-10.1177_20563051231177920 for Mapping the Russian Political Influence Ecosystem: The Night Wolves Biker Gang by Olga Boichak in Social Media + Society
sj-docx-1-tah-10.1177_20406207231179331 – Supplemental material for Real-world patient characteristics and treatment patterns of polycythemia vera in Taiwan between 2016 and 2017: a nationwide cross-sectional study
Creators: name: Tsai, Tsung-Hsien
name: Yu, Lennex Hsueh-Lin
name: Yu, Ming-Sun
name: Huang, Shih-Hao
name: Lin, Alex Jia-Hong
name: Lee, Kuan-Der
name: Chen, Min-Chi
Publisher: name: SAGE Journals
Year: 2023
Subjects: subject: Cardiology
subject: 111299 Oncology and Carcinogenesis not elsewhere classified
subject: FOS: Clinical medicine
subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified

description: Supplemental material, sj-docx-1-tah-10.1177_20406207231179331 for Real-world patient characteristics and treatment patterns of polycythemia vera in Taiwan between 2016 and 2017: a nationwide cross-sectional study by Tsung-Hsien Tsai, Lennex Hsueh-Lin Yu, Ming-Sun Yu, Shih-Hao Huang, Alex Jia-Hong Lin, Kuan-Der Lee and Min-Chi Chen in Therapeutic Advances in Hematology
Additional file 1 of Effects of task-based mirror therapy on upper limb motor function in hemiplegia: study protocol for a randomized controlled clinical trial
Creators: name: Liu, Hongzhen
name: Xu, Yangjie
name: Jiang, Wei
name: Hu, Fangchao
name: Zhou, Yi
name: Pan, Lu
name: Zhou, Feng
name: Yin, Ying
name: Tan, Botao
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Mental Health

description: Supplementary Material 1.
sj-docx-1-tan-10.1177_17562864231180711 – Supplemental material for Autonomic dysfunction entwined with post-COVID but absent in non-post-COVID patients: a neurophysiological and neurosonology study
Creators: name: Papadopoulou, Marianna
name: Bakola, Eleni
name: Papapostolou, Apostolos
name: Stefanou, Maria-Ioanna
name: Andreadou, Elisabeth
name: Zouvelou, Vasiliki
name: Stefanatou, Maria
name: Gaga, Mina
name: Michopoulos, Ioannis
name: Tsivgoulis, Georgios
Publisher: name: SAGE Journals
Year: 2023
Subjects: subject: 110904 Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified

description: Supplemental material, sj-docx-1-tan-10.1177_17562864231180711 for Autonomic dysfunction entwined with post-COVID but absent in non-post-COVID patients: a neurophysiological and neurosonology study by Marianna Papadopoulou, Eleni Bakola, Apostolos Papapostolou, Maria-Ioanna Stefanou, Elisabeth Andreadou, Vasiliki Zouvelou, Maria Stefanatou, Mina Gaga, Ioannis Michopoulos and Georgios Tsivgoulis in Therapeutic Advances in Neurological Disorders
Additional file 2 of Effects of task-based mirror therapy on upper limb motor function in hemiplegia: study protocol for a randomized controlled clinical trial
Creators: name: Liu, Hongzhen
name: Xu, Yangjie
name: Jiang, Wei
name: Hu, Fangchao
name: Zhou, Yi
name: Pan, Lu
name: Zhou, Feng
name: Yin, Ying
name: Tan, Botao
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Mental Health

description: Supplementary Material 2.
Inducing Autophagic Cell Death by Nsp5 of Porcine Reproductive and Respiratory Syndrome Virus
Creators: name: Yang, Liping
name: Wang, Rong
name: Ma, Zexu
name: Wang, Yu
name: Zhang, Yanjin
Publisher: name: Digital Repository at the University of Maryland
Year: 2015
Subjects: Porcine reproductive and respiratory syndrome virus
PRRSV
NSP5
Autophagy
Cell death

description: Funding for Open Access provided by the UMD Libraries Open Access Publishing Fund.
description: Porcine Reproductive and Respiratory Syndrome (PRRS) leads to severe economic losses to the swine-producing industry. Many unclear questions remain on pathogenesis of PRRS virus (PRRSV), including the mechanism of PRRSV-induced cell death. In this study, we cloned and expressed a PRRSV non-structural protein, nsp5, and discovered that it induced cell death in cultured cells. The nsp5 protein localized in cytoplasm and majority of the protein concentrated in perinuclear region. Along with extension of incubation time, the nsp5 tended to form puncta and polarized besides nucleus. An interesting observation was that the nsp5 expression induced cell death. Cell viability assay showed that the cells with nsp5 expression had over 2-fold more cell death than cells with empty vector. Further study indicated that the nsp5 induced cell death via autophagy. Treatment with 3-MA, an autophagy inhibitor, blocked the nsp5- induced cell death. These results suggest that nsp5 might play an important role in PRRSV-induced cell death. Further examination on the mechanism is warranted.
Sustaining Interferon Induction by a High-Passage Atypical Porcine Reproductive and Respiratory Syndrome Virus Strain
Creators: name: Ma, Zexu
name: Yu, Ying
name: Xiao, Yueqiang
name: Opriessnig, Tanja
name: Wang, Rong
name: Yang, Liping
name: Nan, Yuchen
name: Samal, Siba K.
name: Halbur, Patrick G.
name: Zhang, Yan-Jin
Publisher: name: Digital Repository at the University of Maryland
Year: 2016

description: Funding for Open Access provided by the UMD Libraries Open Access Publishing Fund.
description: Porcine reproductive and respiratory syndrome virus (PRRSV) strain A2MC2 induces type I interferons in cultured cells. The objective of this study was to attenuate this strain by serial passaging in MARC-145 cells and assess its virulence and immunogenicity in pigs. The A2MC2 serially passaged 90 times (A2MC2-P90) retains the feature of interferon induction. The A2MC2-P90 replicates faster with a higher virus yield than wild type A2MC2 virus. Infection of primary pulmonary alveolar macrophages (PAMs) also induces interferons. Sequence analysis showed that the A2MC2-P90 has genomic nucleic acid identity of 99.8% to the wild type but has a deletion of 543 nucleotides in nsp2. The deletion occurred in passage 60. The A2MC2-P90 genome has a total of 35 nucleotide variations from the wild type, leading to 26 amino acid differences. Inoculation of three-week-old piglets showed that A2MC2-P90 is avirulent and elicits immune response. Compared with Ingelvac PRRS® MLV strain, A2MC2-P90 elicits higher virus neutralizing antibodies. The attenuated IFN inducing A2MC2-P90 should be useful for development of an improved PRRSV vaccine.
Self-interacting dark matter with a stable vector mediator
Creators: name: Duerr, Michael
name: Schmidt-Hoberg, Kai
name: Wild, Sebastian
Publisher: name: Deutsches Elektronen-Synchrotron, DESY, Hamburg
Year: 2018
Subjects: new physics
dark matter: relic density
dark matter: mediation
dark matter: coupling
dark matter: interaction
dark matter: freeze-out
freeze-out: thermal
nucleosynthesis: big bang
cosmic background radiation

description: Light vector mediators can naturally induce velocity-dependent dark matter self-interactions while at the same time allowing for the correct dark matter relic abundance via thermal freeze-out. If these mediators subsequently decay into Standard Model states such as electrons or photons however, this is robustly excluded by constraints from the Cosmic Microwave Background. We study to what extent this conclusion can be circumvented if the vector mediator is stable and hence contributes to the dark matter density while annihilating into lighter degrees of freedom. We find viable parts of parameter space which lead to the desired self-interaction cross section of dark matter to address the small-scale problems of the collisionless cold dark matter paradigm while being compatible with bounds from the Cosmic Microwave Background and Big Bang Nucleosynthesis observations.
Comparative analysis of a sex chromosome from the blackchin tilapia, Sarotherodon melanotheron
Creators: name: Gammerdinger, William J.
name: Conte, Matthew A.
name: Baroiller, Jean-François
name: D’Cotta, Helena
name: Kocher, Thomas D.
Publisher: name: Digital Repository at the University of Maryland
Year: 2016
Subjects: African cichlids
Sex chromosome evolution
Sex-determination

description: Funding for Open Access provided by the UMD Libraries Open Access Publishing Fund.
description: Background: Inversions and other structural polymorphisms often reduce the rate of recombination between sex chromosomes, making it impossible to fine map sex-determination loci using traditional genetic mapping techniques. Here we compare distantly related species of tilapia that each segregate an XY system of sex-determination on linkage group 1. We use whole genome sequencing to identify shared sex-patterned polymorphisms, which are candidates for the ancestral sex-determination mutation. Results: We found that Sarotherodon melanotheron segregates an XY system on LG1 in the same region identified in Oreochromis niloticus. Both species have higher densities of sex-patterned SNPs, as well as elevated number of ancestral copy number variants in this region when compared to the rest of the genome, but the pattern of differentiation along LG1 differs between species. The number of sex-patterned SNPs shared by the two species is small, but larger than expected by chance, suggesting that a novel Y-chromosome arose just before the divergence of the two species. We identified a shared sex-patterned SNP that alters a Gata4 binding site near Wilms tumor protein that might be responsible for sex-determination. Conclusions: Shared sex-patterned SNPs, insertions and deletions suggest an ancestral sex-determination system that is common to both S. melanotheron and O. niloticus. Functional analyses are needed to evaluate shared SNPs near candidate genes that might play a role in sex-determination of these species. Interspecific variation in the sex chromosomes of tilapia species provides an excellent model system for understanding the evolution of vertebrate sex chromosomes.
Additional file 1 of Job description and perception of clinical research personnel working in a network of French intensive care units
Creators: name: Adda, Mireille
name: Dupuis, Claire
name: Gouby, Gérald
name: Dubray, Claude
name: Reignier, Jean
name: Souweine, Bertrand
name: Dualé, Christian
Publisher: name: figshare
Year: 2024
Subjects: Biotechnology
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Science Policy

description: Additional file 1. Details of the survey questionnaire.
Benefits of gene flow are mediated by individual variability in self-compatibility in small isolated populations of an endemic plant species
Creators: name: Frye, Christopher T.
name: Neel, Maile C.
Publisher: name: Digital Repository at the University of Maryland
Year: 2016
Subjects: endemic
gene flow
index of self-incompatibility
mating system
pseudo-self-fertility
Trifolium virginicum

description: Funding for Open Access provided by the UMD Libraries Open Access Publishing Fund.
description: Many rare and endemic species experience increased rates of self-fertilization and mating among close relatives as a consequence of existing in small populations within isolated habitat patches. Variability in self-compatibility among individuals within populations may reflect adaptation to local demography and genetic architecture, inbreeding, or drift. We use experimental hand-pollinations under natural field conditions to assess the effects of gene flow in 21 populations of the central Appalachian endemic Trifolium virginicum that varied in population size and degree of isolation. We quantified the effects of distance from pollen source on pollination success and fruit set. Rates of self-compatibility varied dramatically among maternal plants, ranging from 0% to 100%. This variation was unrelated to population size or degree of isolation. Nearly continuous variation in the success of selfing and near-cross-matings via hand pollination suggests that T. virginicum expresses pseudo-self- fertility, whereby plants carrying the same S-allele mate successfully by altering the self-incompatibility reaction. However, outcrossing among populations produced significantly higher fruit set than within populations, an indication of drift load. These results are consistent with strong selection acting to break down self-incompatibility in these small populations and/or early-acting inbreeding depression expressed upon selfing.
Supplemental Material - High health care use prior to elective surgery for osteoarthritis is associated with poor postoperative outcomes: A Canadian population-based cohort study
Creators: name: Canizares, Mayilee
name: Power, J Denise
name: Perruccio, Anthony V
name: Paterson, Michael
name: Mahomed, Nizar N
name: Rampersaud, Y Raja
Publisher: name: SAGE Journals
Year: 2023
Subjects: Health and Community Services
Public Health and Health Services not elsewhere classified

description: Supplemental Material for High health care use prior to elective surgery for osteoarthritis is associated with poor postoperative outcomes: A Canadian population-based cohort study by Mayilee Canizares, J Denise Power, Anthony V Perruccio, Michael Paterson, Nizar N Mahomed, and Y Raja Rampersaud in Journal of Health Services Research & Policy
Topological frustration of artificial spin ice
Creators: name: Drisko, Jasper
name: Marsh, Thomas
name: Cumings, John
Publisher: name: Digital Repository at the University of Maryland
Year: 2017

description: Funding for Open Access provided by the UMD Libraries Open Access Publishing Fund.
description: Frustrated systems, typically characterized by competing interactions that cannot all be simultaneously satisfied, display rich behaviours not found elsewhere in nature. Artificial spin ice takes a materials-by-design approach to studying frustration, where lithographically patterned bar magnets mimic the frustrated interactions in real materials but are also amenable to direct characterization. Here, we introduce controlled topological defects into square artificial spin ice lattices in the form of lattice edge dislocations and directly observe the resulting spin configurations. We find the presence of a topological defect produces extended frustration within the system caused by a domain wall with indeterminate configuration. Away from the dislocation, the magnets are locally unfrustrated, but frustration of the lattice persists due to its topology. Our results demonstrate the non-trivial nature of topological defects in a new context, with implications for many real systems in which a typical density of dislocations could fully frustrate a canonically unfrustrated system.
Additional file 2 of Job description and perception of clinical research personnel working in a network of French intensive care units
Creators: name: Adda, Mireille
name: Dupuis, Claire
name: Gouby, Gérald
name: Dubray, Claude
name: Reignier, Jean
name: Souweine, Bertrand
name: Dualé, Christian
Publisher: name: figshare
Year: 2024
Subjects: Biotechnology
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Science Policy

description: Additional file 2. Description of the 19 registered participants who did not fully complete the survey.
Connecting self-efficacy and views about the nature of science in undergraduate research experiences
Creators: name: Quan, Gina M.
name: Elby, Andrew
Publisher: name: Digital Repository at the University of Maryland
Year: 2016

description: Funding for Open Access provided by the UMD Libraries Open Access Publishing Fund.
description: Undergraduate research can support students’ more central participation in physics. We analyze markers of two coupled shifts in participation: changes in students’ views about the nature of science coupled to shifts in self-efficacy toward physics research. Students in the study worked with faculty and graduate student mentors on research projects while also participating in a seminar where they learned about research and reflected on their experiences. In classroom discussions and in clinical interviews, students described gaining more nuanced views about the nature of science, specifically related to who can participate in research and what participation in research looks like. This shift was coupled to gains in self-efficacy toward their ability to contribute to research; they felt like their contributions as novices mattered. We present two case studies of students who experienced coupled shifts in self-efficacy and views about nature-of-science shifts, and a case study of a student for whom we did not see either shift, to illustrate both the existence of the coupling and the different ways it can play out. After making the case that this coupling occurs, we discuss some potential underlying mechanisms. Finally, we use these results to argue for more nuanced interpretations of self-efficacy measurements.
sj-docx-1-jva-10.1177_11297298231217318 – Supplemental material for Vascular access for hemodialysis in Italy: What a national survey reveals
Creators: name: Napoli, Marcello
name: Guzzi, Francesco
name: Morale, Walter
name: Lomonte, Carlo
name: Galli, Franco
name: Lodi, Massimo
name: Bonforte, Giuseppe
name: Bonucchi, Decenzio
name: Brunori, Giuliano
name: Buzzi, Laura
name: Forneris, Giacomo
name: Gallieni, Maurizio
name: Meola, Mario
name: Pirozzi, Nicola
name: Sessa, Concetto
name: Spina, Monica
name: Tazza, Luigi
Publisher: name: SAGE Journals
Year: 2024
Subjects: Cardiology

description: Supplemental material, sj-docx-1-jva-10.1177_11297298231217318 for Vascular access for hemodialysis in Italy: What a national survey reveals by Marcello Napoli, Francesco Guzzi, Walter Morale, Carlo Lomonte, Franco Galli, Massimo Lodi, Giuseppe Bonforte, Decenzio Bonucchi, Giuliano Brunori, Laura Buzzi, Giacomo Forneris, Maurizio Gallieni, Mario Meola, Nicola Pirozzi, Concetto Sessa, Monica Spina and Luigi Tazza in The Journal of Vascular Access
sj-docx-1-cms-10.1177_12034754231221988 – Supplemental material for Atopic Dermatitis Patient Needs Assessed through the Largest Online Patient Community: A Cross-Sectional Reddit Analysis
Creators: name: Joly-Chevrier, Maxine
name: Aly, Safin
name: Bahous, Kaoutar
name: Lefrançois, Philippe
Publisher: name: SAGE Journals
Year: 2024
Subjects: Medicine

description: Supplemental material, sj-docx-1-cms-10.1177_12034754231221988 for Atopic Dermatitis Patient Needs Assessed through the Largest Online Patient Community: A Cross-Sectional Reddit Analysis by Maxine Joly-Chevrier, Safin Aly, Kaoutar Bahous and Philippe Lefrançois in Journal of Cutaneous Medicine and Surgery
Additional file 3 of Job description and perception of clinical research personnel working in a network of French intensive care units
Creators: name: Adda, Mireille
name: Dupuis, Claire
name: Gouby, Gérald
name: Dubray, Claude
name: Reignier, Jean
name: Souweine, Bertrand
name: Dualé, Christian
Publisher: name: figshare
Year: 2024
Subjects: Biotechnology
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Science Policy

description: Additional file 3. Details of the tasks currently carried out by the responders (N = 78).
Hyperpolarization-Activated Currents and Subthreshold Resonance in Granule Cells of the Olfactory Bulb
Creators: name: Hu, Ruilong
name: Ferguson, Katie A.
name: Whiteus, Christina B.
name: Meijer, Dimphna H.
name: Araneda, Ricardo C.
Publisher: name: Digital Repository at the University of Maryland
Year: 2016
Subjects: granule cell
HCN
neurogenesis
olfactory bulb
resonance

description: Funding for Open Access provided by the UMD Libraries Open Access Publishing Fund.
description: An important contribution to neural circuit oscillatory dynamics is the ongoing activation and inactivation of hyperpolarization-activated currents (/h). Network synchrony dynamics play an important role in the initial processing of odor signals by the main olfactory bulb (MOB) and accessory olfactory bulb (AOB). In the mouse olfactory bulb, we show that /h is present in granule cells (GCs), the most prominent inhibitory neuron in the olfactory bulb, and that /h underlies subthreshold resonance in GCs. In accord with the properties of /h, the currents exhibited sensitivity to changes in extracellular K+ concentration and ZD7288 (4-ethylphenylamino-1,2-dimethyl-6-methylaminopyrimidin chloride), a blocker of /h. ZD7288 also caused GCs to hyperpolarize and increase their input resistance, suggesting that /h is active at rest in GCs. The inclusion of cAMP in the intracellular solution shifted the activation of /h to less negative potentials in the MOB, but not in the AOB, suggesting that channels with different subunit composition mediate /h in these regions. Furthermore, we show that mature GCs exhibit /h-dependent subthreshold resonance in the theta frequency range (4–12 Hz). Another inhibitory subtype in the MOB, the periglomerular cells, exhibited /h-dependent subthreshold resonance in the delta range (1–4 Hz), while principal neurons, the mitral cells, do not exhibit /h-dependent subthreshold resonance. Importantly, /h size, as well as the strength and frequency of resonance in GCs, exhibited a postnatal developmental progression, suggesting that this development of /h in GCs may differentially contribute to their integration of sensory input and contribution to oscillatory circuit dynamics.
Supplemental Material - Comprehensive scoping review of research on intercultural love and romantic relationships
Creators: name: Yurtaeva, Ekaterina
name: Charura, Divine
Publisher: name: SAGE Journals
Year: 2024
Subjects: Communication and Media Studies not elsewhere classified
Psychology not elsewhere classified

description: Supplemental Material for Comprehensive scoping review of research on intercultural love and romantic relationships by Ekaterina Yurtaeva and Divine Charura in Journal of Social and Personal Relationships
Pole N-flation
Creators: name: Dias, Mafalda
name: Frazer, Jonathan
name: Retolaza, Ander
name: Scalisi, Marco
name: Westphal, Alexander
Publisher: name: Deutsches Elektronen-Synchrotron, DESY, Hamburg
Year: 2018

description: A second order pole in the scalar kinetic term can lead to a class of inflation models with universal predictions referred to as pole inflation or $\alpha$-attractors. While this kinetic structure is ubiquitous in supergravity effective field theories, realising a consistent UV complete model in e.g. string theory is a non-trivial task. For one, one expects quantum corrections arising in the vicinity of the pole which may spoil the typical attractor dynamics. As a conservative estimate of the range of validity of supergravity models of pole inflation we employ the weak gravity conjecture (WGC). We find that this constrains the accessible part of the inflationary plateau by limiting the decay constant of the axion partner. For the original single complex field models, the WGC does not even allow the inflaton to reach the inflationary plateau region. We propose addressing these problems by evoking the assistance of $N$ scalar fields from the open string moduli. This improves radiative control by reducing the required range of each individual field. Furthermore, it relaxes the WGC bound allowing to inflate on the plateau, although remaining at finite distance from the pole. Finally, we outline steps towards an embedding of pole N-flation in type IIB string theory on fibred Calabi-Yau manifolds.
Decay Chain Reconstruction in Belle II
Creators: name: Tenchini, Francesco
Publisher: name: Deutsches Elektronen-Synchrotron, DESY, Hamburg
Year: 2018

description: 23rd International Conference on Computing in High Energy and Nuclear Physics, CHEP 2018, Sofia, National Palace of Culture, Bulgaria, 9 Jul 2018 - 13 Jul 2018
description: The Belle II detector will begin its data taking phase in 2018. Featuring a state of the art vertex detector with innovative pixel sensors, it will record collisions of e+e- beams from the SuperKEKB accelerator which is slated to provide luminosities 40x higher than KEKB.This large amount of data will come at the price of an increased beam background, as well as an operating point providing a lowered Lorentz boost when compared to Belle.This leads to new challenges for analysts seeking to perform precision measurements, as increasingly precise vertex position reconstruction and background rejection power is needed to take advantage of the unprecedented statistics provided. I will discuss the decay reconstruction techniques available to make such measurements possible.I will present an approach to particle decay reconstruction based on the global fit of the full decay chain, implemented using a Kalman filter. Unlike traditional reconstruction workflows where vertices are individually reconstructed, this technique (first used in BaBar [arXiv:physics/0503191]) is able to fit underconstrained vertices by exploiting well resolved elements elsewhere in the decay chain; this is especially well suited to the treatment of processes with neutral decays. It simultaneously allows for more precise vertex position resolution (directly impacting e.g. time-dependent CP violation measurements), improved background rejection, and increased statistical power through the incorporation of a larger number of decay modes.
Non-pharmacological interventions for veterans living with chronic pain: a scoping review and intervention map
Creators: name: Furtado, Rochelle
name: MacDermid, Joy C.
name: Walton, David M.
name: Nazari, Goris
name: Bobos, Pavlos
Publisher: name: Taylor & Francis
Year: 2025
Subjects: Medicine
Biotechnology
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Science Policy

description: To describe the content of studied intervention programs, the rationale/mechanism and outcomes from these studies and the limitations and gaps within the existing literature. CINAHL, EMBASE, PubMed, Cochrane Reviews, and Google Scholar were searched for studies. Three authors screened studies against predefined inclusion criteria. Data were analyzed through qualitative synthesis. Articles were included if they addressed a rehabilitation intervention that focused on chronic pain management in a population of military veterans. A total of 31 articles were included, 25 being randomized trials. Interventions varied in design components, sessions, and delivery mode (58% in-person, 25% remote, 17% mixed). Adherence and fidelity were reported by 78% of studies. Only 4/31 studies reported the use of veteran engagement during development of the intervention. A conceptual map summarizing the intervention components (5 main categories) expected mechanisms and outcomes (process, health and patient specific) from the primary interventions was created. Poor reporting of content, rationale, and frameworks of non-pharmacological interventions for military veterans may explain why systematic reviews have not found support for their value. Future trials must improve rigor in design and reporting to be explicit and responsive to the needs of the veteran population facing chronic pain Military veterans are at higher risk for developing chronic pain due to their unique occupational exposures (e.g., traumatic injuries).While existing evidence supports a wide range of non-pharmacologic interventions for pain management in this population, there is considerable variation between studies which poses a challenge when making decisions about appropriate treatments.Programs that are informed by a theoretical framework, produced in collaboration with veterans, and offered on a variety of platforms will be more inclusive for this population. Military veterans are at higher risk for developing chronic pain due to their unique occupational exposures (e.g., traumatic injuries). While existing evidence supports a wide range of non-pharmacologic interventions for pain management in this population, there is considerable variation between studies which poses a challenge when making decisions about appropriate treatments. Programs that are informed by a theoretical framework, produced in collaboration with veterans, and offered on a variety of platforms will be more inclusive for this population.
Additional file 4 of Job description and perception of clinical research personnel working in a network of French intensive care units
Creators: name: Adda, Mireille
name: Dupuis, Claire
name: Gouby, Gérald
name: Dubray, Claude
name: Reignier, Jean
name: Souweine, Bertrand
name: Dualé, Christian
Publisher: name: figshare
Year: 2024
Subjects: Biotechnology
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Science Policy

description: Additional file 4. Details of the responders’ suggestions to improve the different aspects of their job (N = 78).
Threshold resummation of the rapidity distribution for Drell-Yan production at NNLO+NNLL
Creators: name: Banerjee, Pulak
name: Das, Goutam
name: Dhani, Prasanna K.
name: Ravindran, V.
Publisher: name: Deutsches Elektronen-Synchrotron, DESY, Hamburg
Year: 2018
Subjects: parton: distribution function
resummation: threshold
quantum chromodynamics: perturbation theory
scale: renormalization
higher-order: 2
dimension: 2
Drell-Yan process
rapidity
CERN LHC Coll
factorization
phase space
stability
lepton

description: We consider the production of pairs of lepton through the Drell-Yan process at the LHC and present the most accurate prediction on their rapidity distribution. While the fixed order prediction is already known to next-to-next-to-leading order in perturbative QCD, the resummed contribution coming from threshold region of phase space up to next-to-next-to-leading logarithmic (NNLL) accuracy has been computed in this article. The formalism developed in Nucl. Phys. B327, 323 (1989), arXiv:0608308 and arXiv:1708.05706 has been used to resum large threshold logarithms in the two dimensional Mellin space to all orders in perturbation theory. We have done a detailed numerical comparison against other approaches that resum certain threshold logarithms in Mellin-Fourier space. Our predictions at NNLL level are close to theirs even though at leading logarithmic and next-to-leading logarithmic level we differ. We have also investigated the impact of these threshold logarithms on the stability of perturbation theory against factorisation and renormalisation scales. While the dependence on these scales does not get better with resummed results, the convergence of the perturbative series shows a better trend compared to the fixed order predictions. This is evident from the reduction in the K-factor for the resummed case compared to fixed order. We also present the uncertainties on the predictions resulting from parton distribution functions.