cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Gahrliepia (Gahrliepia) lepida Nadchatram 1989
Creators: name: Nielsen, David H.
name: Robbins, Richard G.
name: Rueda, Leopoldo M.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Trombidiformes
Trombiculidae
Gahrliepia
Gahrliepia lepida

description: Gahrliepia (Gahrliepia) lepida Nadchatram, 1989:
ORI
Gahrliepia lepida Nadchatram, 1989
Scrobiculata (Squamulata) lepida, Wen & Gui 2000 [decora group]
Gahrliepia lepida, Stekolnikov 2021
description: Published as part of Nielsen, David H., Robbins, Richard G. & Rueda, Leopoldo M., 2021, Annotated world checklist of the Trombiculidae and Leeuwenhoekiidae (1758 - 2021) (Acari: Trombiculoidea), with notes on nomenclature, taxonomy, and distribution, pp. 1-243 in Zootaxa 4967 (1) on page 23, DOI: 10.11646/zootaxa.4967.1.1, http://zenodo.org/record/4745510
Additional file 9: of A systematic review and meta-analysis of the effectiveness of food safety education interventions for consumers in developed countries
Creators: name: Young, Ian
name: Waddell, Lisa
name: Harding, Shannon
name: Greig, Judy
name: Mascarenhas, Mariola
name: Bhairavi Sivaramalingam
name: Pham, Mai
name: Papadopoulos, Andrew
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy

description: Forest plots for each meta-analysis subgroup. (DOCX 527Â kb)
Nephelomys keaysi
Creators: name: Moreira, Camila Do Nascimento
name: Ventura, Karen
name: Percequillo, Alexandre Reis
name: Yonenaga-Yassuda, Yatiyo
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Cricetidae
Nephelomys
Nephelomys keaysi

description: Nephelomys keaysi
Karyotype: 2n = 80 and FN = 92. Autosomal complement: seven medium to small metacentric and submetacentric pairs, and 32 acrocentric pairs large to small decreasing in size. Sex chromosomes: X, a very large subtelocentric; Y, a small acrocentric (Gardner & Patton 1976, pp. 4, Fig. 1C).
description: Published as part of Moreira, Camila Do Nascimento, Ventura, Karen, Percequillo, Alexandre Reis & Yonenaga-Yassuda, Yatiyo, 2020, A review on the cytogenetics of the tribe Oryzomyini (Rodentia: Cricetidae: Sigmodontinae), with the description of new karyotypes, pp. 1-111 in Zootaxa 4876 (1) on page 46, DOI: 10.11646/zootaxa.4876.1.1, http://zenodo.org/record/4423612
High-speed rail and its competitors on long-distance travel in Western Europe
Creators: name: Deutschel, Jakob L.
Publisher: name: ETH Zurich
Year: 2022
Subjects: High-speed rail
Long-distance travel
Air transport
Intermodal competition

description: High-speed rail has proven to be a viable and eco-friendly mode of transport on long-distance travel, challenging high-emission modes like the airplane or the privately owned car. This thesis is centred around the question of how a substantial mode shift from the mentioned high-emission modes to high-speed rail could be achieved in Western Europe. Firstly, different cases of highspeed rail lines across Europe were looked at in a literature review. Then, the mobility tracking data from the MOBIS and MOBIS-Covid studies conducted by the IVT at ETH Zurich were analysed, with a specific focus on long-distance travel. From this, conclusions about the individual long-distance travel behaviour of different societal groups as well as about the characteristics of the different long-distance transportation modes were drawn. These conclusions provided the basis for the analysis of the current high-speed rail network of Western Europe, the suggestions for additional high-speed rail lines as well as the policy proposals for European lawmakers, aiming at proposing an answer to how this mode shift could be realized.
Additional file 5: of A systematic review and meta-analysis of the effectiveness of food safety education interventions for consumers in developed countries
Creators: name: Young, Ian
name: Waddell, Lisa
name: Harding, Shannon
name: Greig, Judy
name: Mascarenhas, Mariola
name: Bhairavi Sivaramalingam
name: Pham, Mai
name: Papadopoulos, Andrew
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: List of studies with more than two intervention and control groups. (DOCX 25Â kb)
Additional file 3: of A systematic review and meta-analysis of the effectiveness of food safety education interventions for consumers in developed countries
Creators: name: Young, Ian
name: Waddell, Lisa
name: Harding, Shannon
name: Greig, Judy
name: Mascarenhas, Mariola
name: Bhairavi Sivaramalingam
name: Pham, Mai
name: Papadopoulos, Andrew
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Science Policy

description: A copy of all review forms. (DOCX 63Â kb)
Optimization for pixel farming
Creators: name: Keller, Michael
Publisher: name: ETH Zurich
Year: 2022
Subjects: Pixel Farming
Optimization

description: This thesis explores three optimization methods for pixel farming, a farming method that attempts to utilize the benefits of intercrop effects within a single field. By reducing a one dimensional version of the problem to finding Hamiltonian Paths, we demonstrate the NP-completeness of the general problem. Further we develop three methods for exploring the large search space. The first method relaxes the pixel farming problem to a fractional version and then uses gradient ascent to search for solutions. The second method leverages parallelism to improve on the known simulated annealing approach. The third method, through the use of a linear program, is able to determine the optimal way of swapping multiple crops at the same time. Iteratively applying the latter method in parallel resulted in an improvement over the state of the art.
Additional file 2: of A systematic review and meta-analysis of the effectiveness of food safety education interventions for consumers in developed countries
Creators: name: Young, Ian
name: Waddell, Lisa
name: Harding, Shannon
name: Greig, Judy
name: Mascarenhas, Mariola
name: Bhairavi Sivaramalingam
name: Pham, Mai
name: Papadopoulos, Andrew
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy

description: Full details of the search strategy. (DOCX 33Â kb)
Nephelomys levipes
Creators: name: Moreira, Camila Do Nascimento
name: Ventura, Karen
name: Percequillo, Alexandre Reis
name: Yonenaga-Yassuda, Yatiyo
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Cricetidae
Nephelomys
Nephelomys levipes

description: Nephelomys levipes
Karyotype: 2n = 76 and FN = 88, mentioned by Percequillo (2015e) based on information provided by J. L. Patton.
description: Published as part of Moreira, Camila Do Nascimento, Ventura, Karen, Percequillo, Alexandre Reis & Yonenaga-Yassuda, Yatiyo, 2020, A review on the cytogenetics of the tribe Oryzomyini (Rodentia: Cricetidae: Sigmodontinae), with the description of new karyotypes, pp. 1-111 in Zootaxa 4876 (1) on page 46, DOI: 10.11646/zootaxa.4876.1.1, http://zenodo.org/record/4423612
MAGNIYLI CEMENT TIYKARÍNDAǴÍ GIPSOCEMENT-PUCOLAN BAYLANÍSTÍRÍWSHÍ QOSÍMSHALÍ KERAMZITBETONÍ
Creators: name: Sadikova, Adolat
name: Artikova, Gulnaza
Publisher: name: Zenodo
Year: 2024

description: Bul maqalada keramzitbetonnıń ayırım ózine tán ózgesheliklerin jaqsılaw usılı usınıs etilgen, oǵan gipsocement-pucolan baylanıstırıwshı qosılıwı nátiyjesindegi labartoriya izleniwleri nátiyjeleri keltirilgen. Fiziko-texnik qásiyetler analizi ámelge asırılǵan hám analoglar menen salıstırıw tiykarında materialdıń qurılısında nátiyjeli qollanılıwı ushın eń maqul variant saylap alınǵan.
MAGNIYLI CEMENT TIYKARÍNDAǴÍ GIPSOCEMENT-PUCOLAN BAYLANÍSTÍRÍWSHÍ QOSÍMSHALÍ KERAMZITBETONÍ
Creators: name: Sadikova, Adolat
Publisher: name: Zenodo
Year: 2024

description: Bul maqalada keramzitbetonnıń ayırım ózine tán ózgesheliklerin jaqsılaw usılı usınıs etilgen, oǵan gipsocement-pucolan baylanıstırıwshı qosılıwı nátiyjesindegi labartoriya izleniwleri nátiyjeleri keltirilgen. Fiziko-texnik qásiyetler analizi ámelge asırılǵan hám analoglar menen salıstırıw tiykarında materialdıń qurılısında nátiyjeli qollanılıwı ushın eń maqul variant saylap alınǵan.
Nephelomys maculiventer
Creators: name: Moreira, Camila Do Nascimento
name: Ventura, Karen
name: Percequillo, Alexandre Reis
name: Yonenaga-Yassuda, Yatiyo
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Cricetidae
Nephelomys
Nephelomys maculiventer

description: Nephelomys maculiventer
Karyotype: 2n = 66 and FN = 112. Autosomal complement: 15 medium to small metacentric and submetacentric pairs, nine subtelocentric pairs (one large, four medium, and four small), and eight acrocentric pairs (one large, three medium, and four small). Sex chromosomes: X, a medium metacentric; Y, a small submetacentric (Gardner & Patton 1976, pp. 4, Fig. 1A).
description: Published as part of Moreira, Camila Do Nascimento, Ventura, Karen, Percequillo, Alexandre Reis & Yonenaga-Yassuda, Yatiyo, 2020, A review on the cytogenetics of the tribe Oryzomyini (Rodentia: Cricetidae: Sigmodontinae), with the description of new karyotypes, pp. 1-111 in Zootaxa 4876 (1) on page 46, DOI: 10.11646/zootaxa.4876.1.1, http://zenodo.org/record/4423612
Mesabolivar rudilapsi Machado, Brescovit & Francisco, 2007, n. sp.
Creators: name: Machado, Éwerton O.
name: Brescovit, Antonio D.
name: Francisco, Rafael C.
Publisher: name: Zenodo
Year: 2007
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Pholcidae
Mesabolivar
Mesabolivar rudilapsi

description: Mesabolivar rudilapsi n. sp.
(Figs. 12–18)
Types. Male holotype from Parque Natural Municipal Nascentes do Ribeirão Garcia (27o01’– 27o06’ S; 49o04’– 49o10’ W; 290–910 m), Blumenau, Santa Catarina, Brazil, 24.X.2004, R.C. Francisco col. with pitfall traps, deposited in IBSP 62448.
Etymology. The species is named in honour of the Brazilian ornithologist Rudi Ricardo Laps, from “Universidade Regional de Blumenau”.
Diagnosis. This species can be distinguished from the congeneric species by the presence of two pairs of medium-sized apophyses on the chelicerae, in an unique position (Figs. 12–14) and by the slender procursus with several ventral ridges (Figs. 15–16).
Description. Male (Holotype): Total length 2.4, carapace width 1.3; leg I: 37.9 (9.3 + 0.4 + 9.9 + 16.1 + 2.7), tibia II: 6.2, tibia III: 4.1, tibia IV: 6.4, tibia I L/d: 71. Carapace light brown; sternum light ochre. Distinct thoracic groove. Eight eyes on slightly elevated ocular area; distance PME–ALE about 60% of PME diameter. Chelicera uniformly light brown, basal segment of chelicera with one ventro-prolateral median apophysis, and one more proximal prolateral protrusion (Figs. 12–14). Palps as in figs. 15–18. Coxa with a very pointed retrolateral apophysis (Fig. 15). Femur proximally with a small basal rounded retrolateral apophysis (Fig. 15).
Procursus dark brown, slender and slightly curved, with several median ventral ridges (Figs. 15–16) and several basal prolateral hairs (Fig. 16). Distinct tip of procursus, ending in a membrane, with a ventral projection (Fig. 17). Bulb simple, with no transparent projection, embolar division of bulb membranous at the end (Fig. 18). Legs light brown; without spines, vertical or curved hairs. Tarsus I with approximately 36 pseudosegments. Opisthosoma globular, pale green, with some lateral bluish spots.
Female. Unknown.
Other material examined. None.
Distribution. Known only from type locality.
description: Published as part of Machado, Éwerton O., Brescovit, Antonio D. & Francisco, Rafael C., 2007, Three new ground dweller Mesabolivar González-Sponga, 1998 (Araneae: Pholcidae) from Blumenau, Santa Catarina, Brazil, pp. 55-61 in Zootaxa 1560 on pages 57-59, DOI: 10.5281/zenodo.178315
Impact of drought on the growth of European beech (Fagus sylvatica L.): A case study in the canton of Basel-Landschaft, Switzerland
Creators: name: Scheggia, Michel
Publisher: name: ETH Zurich
Year: 2020

description: The recent very dry and hot summers have induced widespread dieback of European beech (Fagus sylvatica L.) in the region around Basel. Although drought frequency, intensity and duration are expected to increase in the near future, the effects of drought events on growth of beech trees are still not completely understood. It is unclear why some beech trees died or have experienced severe vitality decline while other trees have survived the last droughts and remained vital. Here, we took advantage of the unprecedented beech mortality event that is occurring around Basel to investigate the growth response of vital and dying (unvital) beech trees to past and recent extreme droughts.
To do this, different analyses were conducted. First, response and correlation functions were calculated between growth series of individual vital and unvital trees and climate variables such as temperature, precipitation and drought index. Second, a superposed epoch analysis was used to assess the impact of past extreme drought years on growth.
Resilience components (resistance, recovery and resilience) were also calculated separately for vital and unvital trees and the differences between the two groups were statistically tested. Finally, linear mixed models were used to assess the influence of tree size, drought and competition on tree growth. We built three models with three time windows in order to assess the impact of the variables previously mentioned over three different time periods of the trees’ lifespan. The time windows were 1900-2019, 1970-2019, 2015-2019.
The results showed a divergence in the growth of vital and unvital trees starting from the 1970s, with a strong decrease of the basal area increment for unvital trees in the last five decades. The growth of both vital and unvital trees responded negatively to summer drought. This result was also reflected in the superposed epoch analysis, which showed a strong decrease in growth in the past extreme drought years. Both vital and unvital trees were generally more resistant and had a stronger recovery during past extreme drought years. Tree resilience showed a declining trend, in particular for unvital trees. Finally, the models showed that tree vitality, drought and competition have all had a strong and significant effect on tree growth. The results highlighted a high sensitivity of beech trees to drought and climatic water stress that may impact future growth rate.
Nephelomys meridensis
Creators: name: Moreira, Camila Do Nascimento
name: Ventura, Karen
name: Percequillo, Alexandre Reis
name: Yonenaga-Yassuda, Yatiyo
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Cricetidae
Nephelomys
Nephelomys meridensis

description: Nephelomys meridensis
Karyotype: 2n = 66 and FN = 104. Autosomal complement: one medium subtelocentric pair, 19 metacentric and submetacentric pairs medium to small decreasing in size, and 12 acrocentric pairs medium to small decreasing in size. Sex chromosomes: X chromosome presented two different morphologies, a medium metacentric, and a medium acrocentric; Y, a small subtelocentric. C-banding metaphases exhibited blocks of constitutive heterochromatin on the pericentromeric region of all autosomes, with the exception of four biarmed pairs which little or no centromeric heterochromatin was found, in addition, some acrocentric pairs presented a lightly stained C-band on distal regions of its long arm. The both X chromosome presented two heterochromatic blocks, one pericentromeric and another distal. The Y chromosome was totally heterochromatic in both cases. G-banding was also performed (Aguilera et al. 1995, pp. 46, Fig. 2B).
Another karyotype was also presented by Aguilera et al. (1995), for the samples of western Venezuela, from the Páramo de Tamá. Although distinct from N. meridensis on morphological and karyological traits, specimens of this region were provisionally identified as N. meridensis (Percequillo 2015e), until subsequent analyses validate or reject this hypothesis. Karyotype: 2n = 66 and FN = 92. Autosomal complement: one medium subtelocentric pair, 13 metacentric and submetacentric pairs medium to small decreasing in size, and 18 acrocentric pairs medium to small decreasing in size. Sex chromosomes: X, a medium acrocentric; Y, unknown as only a female was examined. C-banding metaphases exhibited blocks of constitutive heterochromatin on the pericentromeric region of all autosomes, some acrocentric pairs presented a lightly stained C-band on distal regions of its long arm. The X chromosome presented two heterochromatic blocks, one pericentromeric and another distal. G-banding was also performed (Aguilera et al. 1995, pp. 46, Fig. 2A).
Aguilera et al. (1995) analyzed by G-banding these two karyotypes and suggested that the difference in the number of chromosomal arms was possible to be explained due the occurrence of pericentric inversions.
description: Published as part of Moreira, Camila Do Nascimento, Ventura, Karen, Percequillo, Alexandre Reis & Yonenaga-Yassuda, Yatiyo, 2020, A review on the cytogenetics of the tribe Oryzomyini (Rodentia: Cricetidae: Sigmodontinae), with the description of new karyotypes, pp. 1-111 in Zootaxa 4876 (1) on pages 46-47, DOI: 10.11646/zootaxa.4876.1.1, http://zenodo.org/record/4423612
Additional file 12: Figure S12. of Ascertainment bias from imputation methods evaluation in wheat
Creators: name: Brandariz, Sofía
name: Reymúndez, Agustín González
name: Lado, Bettina
name: Malosetti, Marcos
name: Garcia, Antonio
name: Quincke, Martín
name: Jarislav Von Zitzewitz
name: Castro, Marina
name: Matus, Iván
name: Pozo, Alejandro Del
name: Castro, Ariel
name: Gutiérrez, Lucía
Publisher: name: Figshare
Year: 2016
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: Plant Biology
subject: 60506 Virology

description: Manhattan plots of the GWAS analysis for real phenotype wheat data with 35 % missing rate and a Bonferroni threshold corrected by the effective number of independent markers. For each trait measured and each marker score matrix evaluated, a manhattan plot of the GWAS analysis is presented. The phenotype traits are: DH, Days to Heading; PH, Plant Height; SPM, Spikes Per Square Meter; TKW, Thousands Kernel Weight. The marker score matrices were: NImp (not imputed), Mean (mean imputed), MVN-EM (Multivariate Normal Expectation Maximization method) and RF (Random Forest method). QTL detected by the NImp matrix are in turquoise, QTL detected exclusively by the MVN-EM matrix are in coral, QTL detected exclusively by the Mean matrix are in green, and QTL detected exclusively by the RF matrix are in orchid. (PDF 745 KB)
Additional file 17: Figure S17. of Ascertainment bias from imputation methods evaluation in wheat
Creators: name: Brandariz, Sofía
name: Reymúndez, Agustín González
name: Lado, Bettina
name: Malosetti, Marcos
name: Garcia, Antonio
name: Quincke, Martín
name: Jarislav Von Zitzewitz
name: Castro, Marina
name: Matus, Iván
name: Pozo, Alejandro Del
name: Castro, Ariel
name: Gutiérrez, Lucía
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Plant Biology

description: Boxplots of false positives rate (FPR) with 25 QTL and 35 % missing rate, for major and minor QTL to evaluate the GWAS performance based on simulated matrix with a Bonferroni threshold corrected by the effective number of independent markers. Each parameter was calculated for the combinations of: heritabilties (h 2 ), marker score matrices to simulate the QTL (i.e. Ysim-NImp , Ysim-MVN-EM, Ysim-Mean and Ysim-RF ), and marker score matrices to perform the GWAS analysis (i.e. G NImp, G MVN-EM, G Mean and G RF ). (PDF 143 KB)
Additional file 2: Figure S2. of Ascertainment bias from imputation methods evaluation in wheat
Creators: name: Brandariz, Sofía
name: Reymúndez, Agustín González
name: Lado, Bettina
name: Malosetti, Marcos
name: Garcia, Antonio
name: Quincke, Martín
name: Jarislav Von Zitzewitz
name: Castro, Marina
name: Matus, Iván
name: Pozo, Alejandro Del
name: Castro, Ariel
name: Gutiérrez, Lucía
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Power (PO) and false positives rate (FPR) for major and minor QTL with 25 QTL, for the golden standard from barley, with α = 0.01 threshold. Each parameter was calculated for the combinations of: number of QTL (q), heritabilties (h 2 ), a marker score matrix to simulate the QTL (i.e. Ysim-NoNA ), and marker score matrices to perform the GWAS analysis (i.e. G NImp, G MVN-EM and G Mean ). (PDF 28 KB)
Additional file 3: Figure S3. of Ascertainment bias from imputation methods evaluation in wheat
Creators: name: Brandariz, Sofía
name: Reymúndez, Agustín González
name: Lado, Bettina
name: Malosetti, Marcos
name: Garcia, Antonio
name: Quincke, Martín
name: Jarislav Von Zitzewitz
name: Castro, Marina
name: Matus, Iván
name: Pozo, Alejandro Del
name: Castro, Ariel
name: Gutiérrez, Lucía
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Hematology
subject: Plant Biology

description: Power (PO) and false positives rate (FPR) with 25 QTL, for major and minor QTL for ascertainment bias in imputation performance comparison in barley, with a Bonferroni threshold. Each parameter was calculated for the combinations of: heritabilties (h 2 ), marker score matrices to simulate the QTL (i.e. Ysim-NImp , Ysim-MVN-EM and Ysim-Mean ), and marker score matrices to perform the GWAS analysis (i.e. G NImp, G MVN-EM and G Mean ). (PDF 34 KB)
Nephelomys pectoralis
Creators: name: Moreira, Camila Do Nascimento
name: Ventura, Karen
name: Percequillo, Alexandre Reis
name: Yonenaga-Yassuda, Yatiyo
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Cricetidae
Nephelomys
Nephelomys pectoralis

description: Nephelomys pectoralis
Karyotype: 2n = 66 and FN = 94. Autosomal complement: nine medium to small metacentric and submetacentric pairs, six subtelocentric pairs (three large and three small), and 17 acrocentric pairs (one large and the remaining medium to small). Sex chromosomes: X, a large acrocentric; Y, a small submetacentric (Gardner & Patton 1976, pp. 4, Fig. 1B).
description: Published as part of Moreira, Camila Do Nascimento, Ventura, Karen, Percequillo, Alexandre Reis & Yonenaga-Yassuda, Yatiyo, 2020, A review on the cytogenetics of the tribe Oryzomyini (Rodentia: Cricetidae: Sigmodontinae), with the description of new karyotypes, pp. 1-111 in Zootaxa 4876 (1) on page 47, DOI: 10.11646/zootaxa.4876.1.1, http://zenodo.org/record/4423612
Additional file 1: Figure S1. of Ascertainment bias from imputation methods evaluation in wheat
Creators: name: Brandariz, Sofía
name: Reymúndez, Agustín González
name: Lado, Bettina
name: Malosetti, Marcos
name: Garcia, Antonio
name: Quincke, Martín
name: Jarislav Von Zitzewitz
name: Castro, Marina
name: Matus, Iván
name: Pozo, Alejandro Del
name: Castro, Ariel
name: Gutiérrez, Lucía
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Plant Biology

description: Power (PO) and false positives rate (FPR) for major and minor QTL with 25 QTL, for the golden standard form barley, with a Bonferroni threshold. Each parameter was calculated for the combinations of: heritabilties (h 2 ), a marker score matrix to simulate the QTL (i.e. Ysim-NoNA ), and marker score matrices to perform the GWAS analysis (i.e. G NImp, G MVN-EM and G Mean ). (PDF 28 KB)
Additional file 6: Figure S6. of Ascertainment bias from imputation methods evaluation in wheat
Creators: name: Brandariz, Sofía
name: Reymúndez, Agustín González
name: Lado, Bettina
name: Malosetti, Marcos
name: Garcia, Antonio
name: Quincke, Martín
name: Jarislav Von Zitzewitz
name: Castro, Marina
name: Matus, Iván
name: Pozo, Alejandro Del
name: Castro, Ariel
name: Gutiérrez, Lucía
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Plant Biology

description: Power (PO) and false positives rate (FPR) with 25 QTL and 35 % missing rate, for major and minor QTL to evaluate the GWAS performance based on simulated matrix with a Bonferroni threshold corrected by the effective number of independent markers. Each parameter was calculated for the combinations of: heritabilties (h 2 ), marker score matrices to simulate the QTL (i.e. Ysim-NImp , Ysim-MVN-EM, Ysim-Mean and Ysim-RF ), and marker score matrices to perform the GWAS analysis (i.e. G NImp, G MVN-EM, G Mean and G RF ). (PDF 156 KB)
Additional file 11: Figure S11. of Ascertainment bias from imputation methods evaluation in wheat
Creators: name: Brandariz, Sofía
name: Reymúndez, Agustín González
name: Lado, Bettina
name: Malosetti, Marcos
name: Garcia, Antonio
name: Quincke, Martín
name: Jarislav Von Zitzewitz
name: Castro, Marina
name: Matus, Iván
name: Pozo, Alejandro Del
name: Castro, Ariel
name: Gutiérrez, Lucía
Publisher: name: Figshare
Year: 2016
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: Plant Biology
subject: 60506 Virology

description: Manhattan plots of the GWAS analysis for real phenotype wheat data with 25 % missing rate and a Bonferroni threshold corrected by the effective number of independent markers. For each trait measured and each marker score matrix evaluated, a manhattan plot of the GWAS analysis is presented. The phenotype traits are: DH, Days to Heading; PH, Plant Height; SPM, Spikes Per Square Meter; TKW, Thousands Kernel Weight. The marker score matrices were: NImp (not imputed), Mean (mean imputed), MVN-EM (Multivariate Normal Expectation Maximization method) and RF (Random Forest method). QTL detected by the NImp matrix are in turquoise, QTL detected exclusively by the MVN-EM matrix are in coral, QTL detected exclusively by the Mean matrix are in green, and QTL detected exclusively by the RF matrix are in orchid. (PDF 539 KB)
Additional file 15: Figure S15. of Ascertainment bias from imputation methods evaluation in wheat
Creators: name: Brandariz, Sofía
name: Reymúndez, Agustín González
name: Lado, Bettina
name: Malosetti, Marcos
name: Garcia, Antonio
name: Quincke, Martín
name: Jarislav Von Zitzewitz
name: Castro, Marina
name: Matus, Iván
name: Pozo, Alejandro Del
name: Castro, Ariel
name: Gutiérrez, Lucía
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Plant Biology

description: Boxplots of false positives rate (FPR) with 25 QTL and 50 % missing rate, for major and minor QTL to evaluate the GWAS performance based on simulated matrix with a Bonferroni threshold corrected by the effective number of independent markers. Each parameter was calculated for the combinations of: heritabilties (h 2 ), marker score matrices to simulate the QTL (i.e. Ysim-NImp , Ysim-MVN-EM, Ysim-Mean and Ysim-RF ), and marker score matrices to perform the GWAS analysis (i.e. G NImp, G MVN-EM, G Mean and G RF ). (PDF 144 KB )
Gahrliepia (Gahrliepia) lui Chen and Hsu 1955
Creators: name: Nielsen, David H.
name: Robbins, Richard G.
name: Rueda, Leopoldo M.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Trombidiformes
Trombiculidae
Gahrliepia

description: Gahrliepia (Gahrliepia) lui Chen and Hsu, 1955:
PAL, ORI
Gahrliepia (Schoengastiella) lui Chen and Hsu, 1955; Chen & Hsu 1958a
Schoengastiella (Schoengastiella) lui, Vercammen-Grandjean 1968c [bengalensis group]
Gahrliepia lui, Stekolnikov 2021
Syn.: Gahrliepia (Gahrliepia) octosetosa Chen, Hsu and Wang, 1956
description: Published as part of Nielsen, David H., Robbins, Richard G. & Rueda, Leopoldo M., 2021, Annotated world checklist of the Trombiculidae and Leeuwenhoekiidae (1758 - 2021) (Acari: Trombiculoidea), with notes on nomenclature, taxonomy, and distribution, pp. 1-243 in Zootaxa 4967 (1) on page 23, DOI: 10.11646/zootaxa.4967.1.1, http://zenodo.org/record/4745510
Nesoryzomys Heller 1904
Creators: name: Moreira, Camila Do Nascimento
name: Ventura, Karen
name: Percequillo, Alexandre Reis
name: Yonenaga-Yassuda, Yatiyo
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Muridae
Nesoryzomys

description: Nesoryzomys Heller 1904
The genus Nesoryzomys comprises five species, N. darwini (Osgood 1929), N. fernandinae (Hutterer & Hirsch 1979), N. indefessus (Thomas 1899), N. narboroughi (Heller 1904), and N. swarthi (Orr 1938). These species were restricted to the Galápagos Islands, Ecuador, with recent specimens known from only four of the major islands in the archipelago: Isla Baltra, Isla Fernandina, Isla Santa Cruz, and Isla Santiago. One undescribed species known from fragmentary subfossil remains, have been reported from Isla Isabela and Isla Rábida. Of the five species, two were now considered extinct, N. darwini and N. indefessus (Steadman & Zousmer 1988; Prado & Percequillo 2013; Dowler 2015). There was cytogenetic information available only for N. narboroughi.
description: Published as part of Moreira, Camila Do Nascimento, Ventura, Karen, Percequillo, Alexandre Reis & Yonenaga-Yassuda, Yatiyo, 2020, A review on the cytogenetics of the tribe Oryzomyini (Rodentia: Cricetidae: Sigmodontinae), with the description of new karyotypes, pp. 1-111 in Zootaxa 4876 (1) on page 47, DOI: 10.11646/zootaxa.4876.1.1, http://zenodo.org/record/4423612
Additional file 14: Figure S14. of Ascertainment bias from imputation methods evaluation in wheat
Creators: name: Brandariz, Sofía
name: Reymúndez, Agustín González
name: Lado, Bettina
name: Malosetti, Marcos
name: Garcia, Antonio
name: Quincke, Martín
name: Jarislav Von Zitzewitz
name: Castro, Marina
name: Matus, Iván
name: Pozo, Alejandro Del
name: Castro, Ariel
name: Gutiérrez, Lucía
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Plant Biology

description: Boxplots of false positives rate (FPR) with 25 QTL, for major and minor QTL for ascertainment bias in imputation performance comparison in barley, with a Bonferroni threshold corrected by the effective number of independent markers. Each parameter was calculated for the combinations of: heritabilties (h 2 ), marker score matrices to simulate the QTL (i.e. Ysim-NImp , Ysim-MVN-EM, Ysim-Mean and Ysim-RF ), and marker score matrices to perform the GWAS analysis (i.e. G NImp, G MVN-EM, G Mean and G RF ). (PDF 139 KB)
Surrogate models for uncertainty quantification in computational sciences
Creators: name: Sudret, Bruno
Publisher: name: ETH Zurich
Year: 2022
Subjects: Surrogate models
Polynomial chaos expansion (PCE)
Gaussian process modelling
Structural reliability analysis
Active learning

description: Nowadays, computational models are used in virtually all fields of applied sciences and engineering to predict the behaviour of complex natural or man-made systems. These models, a.k.a. simulators allow engineers to assess the performance of a system in-silico, and then optimize its design or operating. Simulators such as high-fidelity finite element models usually feature dozens of parameters and are costly to run, even when taking full advantage of the available computer power. In parallel, the more complex the system, the more uncertainty in its governing parameters, environmental and operating conditions. In this respect, uncertainty quantification (UQ) methods used to solve reliability, sensitivity or optimal design problems have gained interest in both academia and the industry in the last decade. Monte Carlo simulation is a well-known, brute-force method based on random number generation to solve these problems. It usually requires thousands to millions of simulations for accurate predictions though, which is not tractable with high-fidelity simulators.
In contrast, surrogate models allow us to tackle these UQ problems by constructing an accurate approximation of the simulator’s response from a limited number of runs at selected values (the so-called experimental design) and a learning algorithm. In this lecture, general features of surrogate models and their link with machine learning will be first introduced. Polynomial chaos expansions will then be discussed in details, together with their sparse version for high-dimensional problems. Recent extensions to dynamics will be addressed and applications in sensitivity will be shown as an illustration. Gaussian processes and their use together with active learning will also be addressed to solve reliability analysis.
BOSHLANG`ICH SINFLARNI O`QITISHDA ZAMONAVIY USULLARI
Creators: name: Yuldashova, Go'zal
Publisher: name: Zenodo
Year: 2024

description: Maqolada boshlang'ich sinf o'quvchilarini o'qitishda zamonaviy innavatsion metodlardan foydalanish va ularning turlari to'g'risida ma'lumotlar keltirilgan. Shuningdek, ularning bugungi kundagi ahamiyati haqida so'z borgan.
Texture Optimization for 6 DoF Pose Estimation
Creators: name: Chen, Jiale
Publisher: name: ETH Zurich
Year: 2022

description: 6 DoF pose estimation from monocular RGB images is one of the fundamental tasks in computer vision. However, its accuracy is often limited due to the lack of textures on the objects. In this thesis, we present a novel method to optimize the textures of the objects for pose estimation tasks. Our method is based on deep learning, and we use an end-to-end pipeline to optimize the object’s texture and the pose estimator simultaneously. The pipeline consists of a texture generation network based on the texture field representation, a differentiable renderer, and a pose estimation network. The pipeline is trained on purely synthetic data and is evaluated on both synthetic and real data. Our experiments show that using a deep neural network to automatically perform local optimizations is feasible to generate a texture with good pose estimation accuracy without much human effort. And the network-generated texture outperforms our hand-designed baseline textures.
Nesoryzomys narboroughi
Creators: name: Moreira, Camila Do Nascimento
name: Ventura, Karen
name: Percequillo, Alexandre Reis
name: Yonenaga-Yassuda, Yatiyo
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Muridae
Nesoryzomys
Nesoryzomys narboroughi

description: Nesoryzomys narboroughi
Karyotype: 2n = 32 and FN = 50. Autosomal complement: eight metacentric and submetacentric pairs large to medium decreasing in size, two subtelocentric pairs (one large and one medium), and five acrocentric pairs (one medium and four small). Sex chromosomes: X, a medium acrocentric; Y, a small acrocentric (Gardner & Patton 1976, pp. 10, Fig. 4C).
description: Published as part of Moreira, Camila Do Nascimento, Ventura, Karen, Percequillo, Alexandre Reis & Yonenaga-Yassuda, Yatiyo, 2020, A review on the cytogenetics of the tribe Oryzomyini (Rodentia: Cricetidae: Sigmodontinae), with the description of new karyotypes, pp. 1-111 in Zootaxa 4876 (1) on page 47, DOI: 10.11646/zootaxa.4876.1.1, http://zenodo.org/record/4423612
Additional file 7: Figure S7. of Ascertainment bias from imputation methods evaluation in wheat
Creators: name: Brandariz, Sofía
name: Reymúndez, Agustín González
name: Lado, Bettina
name: Malosetti, Marcos
name: Garcia, Antonio
name: Quincke, Martín
name: Jarislav Von Zitzewitz
name: Castro, Marina
name: Matus, Iván
name: Pozo, Alejandro Del
name: Castro, Ariel
name: Gutiérrez, Lucía
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Evolutionary Biology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Plant Biology

description: Power (PO) and false positives rate (FPR) with 25 QTL and 50 % missing rate, for major and minor QTL to evaluate the GWAS performance based on simulated matrix with a Bonferroni threshold. Each parameter was calculated for the combinations of: heritabilties (h 2 ), marker score matrices to simulate the QTL (i.e. Ysim-NImp , Ysim-MVN-EM and Ysim-Mean ), and marker score matrices to perform the GWAS analysis (i.e. G NImp, G MVN-EM and G Mean ). (PDF 35 KB)
Additional file 13: Figure S13. of Ascertainment bias from imputation methods evaluation in wheat
Creators: name: Brandariz, Sofía
name: Reymúndez, Agustín González
name: Lado, Bettina
name: Malosetti, Marcos
name: Garcia, Antonio
name: Quincke, Martín
name: Jarislav Von Zitzewitz
name: Castro, Marina
name: Matus, Iván
name: Pozo, Alejandro Del
name: Castro, Ariel
name: Gutiérrez, Lucía
Publisher: name: Figshare
Year: 2016
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Plant Biology

description: Boxplots of false positives rate (FPR) for major and minor QTL with 25 QTL, for the golden standard form barley, with a Bonferroni threshold corrected by the effective number of independent markers. Each parameter was calculated for the combinations of: heritabilties (h 2 ), a marker score matrix to simulate the QTL (i.e. Ysim-NoNA ), and marker score matrices to perform the GWAS analysis (i.e. G NImp, G MVN-EM, G Mean and G RF ). (PDF 110 KB)
Understanding the Filecoin Consensus Pledge
Creators: name: Bernardineli, Danilo Lessa
name: Shorish, Jamsheed
name: Hackel, Jakob
Publisher: name: Zenodo
Year: 2023

description: This article delves into the interdisciplinary Cryptoeconomic Mechanism called the Consensus Pledge, which is a crucial component of the Filecoin ecosystem. It combines multiple concepts such as FIL token’s Circulating Supply, Baseline Minting, Quality Adjusted Power (QAP), and per-Sector dynamics to regulate storage provision by a Filecoin Storage Provider. To comprehend the Consensus Pledge, it is necessary to have a thorough understanding of the underlying economics of the Filecoin ecosystem.
Labiobaetis Novikova & Kluge 1987
Creators: name: Kluge, Nikita
name: Sivaruban, T.
name: Srinivasan, Pandiarajan
name: Barathy, S.
name: Isack, Rajasekaran
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Ephemeroptera
Baetidae
Labiobaetis

description: Labiobaetis Novikova & Kluge, 1987
= group atrebatinus: Müller-Liebenau 1969: 150;
= group propinquus: Morihara & McCafferty 1979a: 130; 1979b: 146;
= group molawinensis: Müller-Liebenau 1984: 274;
= molawinensis-atrebatinus-propinquus complex: Müller-Liebenau & Hubbard 1985: 556.
Subgenus Labiobaetis Novikova & Kluge 1987: 13.
Genus Labiobaetis: McCafferty & Waltz 1995: 20.
Type species: Baetis atrebatinus Eaton, 1870.
Comments. The groups atrebatinus, propinquus, molawinensis in the genus Baetis Leach, 1815 were proposed by different authors in application to local faunas: the group atrebatinus for the European fauna (Müller-Liebenau 1969), the group propinquus for the North American fauna (Morihara & McCafferty 1979a; 1979b) and the group molawinensis for the Oriental fauna (Müller-Liebenau 1984). In other respects these three groups represented one and the same taxon, which was outlined and characterized by Novikova & Kluge (1987) as the taxon Labiobaetis (initially with a rank of subgenus, later the rank was raised to a genus). Recently Labiobaetis contains 170 formally described species (including invalid synonyms) and many undescribed species from Holarctic, Afrotropical, Oriental and Australian Regions.
The genus Labiobaetis has very diverse structure of larvae, imagines and eggs, and attempts to divide it into species-groups were suggested. Particularly, Kaltenbach & Gattolliat (2018; 2019; 2021) established several species groups for Oriental (including New Guinean) species based on larval characters. However, total classification of Labiobaetis is still absent. A species group tricolor can be outlined based on imaginal and larval characters.
description: Published as part of Kluge, Nikita, Sivaruban, T., Srinivasan, Pandiarajan, Barathy, S. & Isack, Rajasekaran, 2023, Diagnosis, variability, distribution and systematic position of Labiobaetis pulchellus (Müller-Liebenau & Hubbard 1985) (Ephemeroptera, Baetidae, Baetis s. l.), pp. 94-108 in Zootaxa 5264 (1) on page 95, DOI: 10.11646/zootaxa.5264.1.6, http://zenodo.org/record/7836228
Additional file 8: Figure S8. of Ascertainment bias from imputation methods evaluation in wheat
Creators: name: Brandariz, Sofía
name: Reymúndez, Agustín González
name: Lado, Bettina
name: Malosetti, Marcos
name: Garcia, Antonio
name: Quincke, Martín
name: Jarislav Von Zitzewitz
name: Castro, Marina
name: Matus, Iván
name: Pozo, Alejandro Del
name: Castro, Ariel
name: Gutiérrez, Lucía
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Evolutionary Biology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Plant Biology

description: Power (PO) and false positives rate (FPR) with 25 QTL and 50 % missing rate, for major and minor QTL to evaluate the GWAS performance based on simulated matrix with a α = 0.01 threshold. Each parameter was calculated for the combinations of: heritabilties (h 2 ), marker score matrices to simulate the QTL (i.e. Ysim-NImp , Ysim-MVN-EM and Ysim-Mean ), and marker score matrices to perform the GWAS analysis (i.e. G NImp, G MVN-EM and G Mean ). (PDF 36 KB)
Linux as a universal boot loader for new operating systems
Creators: name: Walter, Jan Nino
Publisher: name: ETH Zurich
Year: 2022

description: Booting a non-Linux operating system on ARM-based systems is difficult. The
booting infrastructure developed targeting solely Linux, Linux in turn evolved
to be bootable on a wide range of such systems. As a result, it is simple to
boot Linux, but difficult to boot a non-Linux OS on an ARM-based system. In
this thesis, we use Linux as a boot loader to boot a target, non-Linux kernel.
The idea is to leave the boot and initialization process to Linux, then take over
the initialized system. We focus on making booting simpler for new research
kernels in development. To make the development of a new kernel simpler, we
let Linux continue its execution after boot in order to support the new kernel.
In this thesis, we show the feasibility of such a boot loader and describe a
concrete implementation. This boot loader implementation is able to boot a
simple kernel. The boot process never turns a CPU off, thus leaving it in an
initialized state. A virtual address space with an identity map is created for the
booted kernel. The boot environment can be modified to suit specific use cases.
We show that it is possible to use virtio to let the booted kernel use a device
through Linux, by letting it use a virtio console in that way. The device type
specific implementation of virtio is decoupled from the specific physical device,
so by implementing it once, all physical devices of that type can be used. The
boot loader itself profits from the hardware and software support of Linux as
well, enabling it to use devices, file systems and networking out of the box.
Additional file 10: Figure S10. of Ascertainment bias from imputation methods evaluation in wheat
Creators: name: Brandariz, Sofía
name: Reymúndez, Agustín González
name: Lado, Bettina
name: Malosetti, Marcos
name: Garcia, Antonio
name: Quincke, Martín
name: Jarislav Von Zitzewitz
name: Castro, Marina
name: Matus, Iván
name: Pozo, Alejandro Del
name: Castro, Ariel
name: Gutiérrez, Lucía
Publisher: name: Figshare
Year: 2016
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Plant Biology

description: QQ plots of the p-values from the GWAS analysis from real phenotype wheat data with 35 % missing rate and a Bonferroni threshold corrected by the effective number of independent markers. For each trait measured and each marker score matrix evaluated, a qq-plot of the p-values resulted form the GWAS analysis is presented. The marker score matrices were: NImp (not imputed) in turquoise, Mean (mean imputed) in green, MVN-EM (Multivariate Normal Expectation Maximization method) in coral and RF (Random Forest method) in orchid. The phenotype traits are: DH, days to heading; PH, Plant Height; SPM, Spikes Per Square Meter; TKW, Thousands Kernel Weight. (PDF 418 KB)
Oecomys Thomas 1906
Creators: name: Moreira, Camila Do Nascimento
name: Ventura, Karen
name: Percequillo, Alexandre Reis
name: Yonenaga-Yassuda, Yatiyo
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Muridae
Oecomys

description: Oecomys Thomas 1906
The genus Oecomys comprises at least 18 recognized species, O. auyantepui (Tate 1939), O. bicolor (Tomes 1860), O. catherinae (Thomas 1909), O. cleberi (Locks 1981), O. concolor (Wagner 1845), O. flavicans (Thomas 1894), O. franciscorum (Pardiñas, Teta, Salazar-Bravo, Myers & Galliari 2016), O. mamorae (Thomas 1906), O. paricola (Thomas 1904), O. phaeotis (Thomas 1901), O. rex (Thomas 1910), O. roberti (Thomas 1904), O. rutilus (Anthony 1921), O. speciosus (Allen & Chapman 1893), O. superans (Thomas 1911), O. sydandersoni (Carleton, Emmons & Musser 2009), O. tapajinus (Thomas 1909), and O. trinitatis (Allen & Chapman 1893). These species were broadly distributed in lowland forested areas from Costa Rica southward to southern Bolivia and north-eastern Argentina (Musser & Carleton 2005; Carleton & Musser 2015; Pardiñas et al. 2016; Rocha et al. 2017; Suárez-Villota et al. 2017). All cytogenetic data available for the genus was presented on Table 8, and the distribution of diploid and fundamental number of karyotyped specimens were presented on Fig. 12 and Fig. 13.
description: Published as part of Moreira, Camila Do Nascimento, Ventura, Karen, Percequillo, Alexandre Reis & Yonenaga-Yassuda, Yatiyo, 2020, A review on the cytogenetics of the tribe Oryzomyini (Rodentia: Cricetidae: Sigmodontinae), with the description of new karyotypes, pp. 1-111 in Zootaxa 4876 (1) on page 47, DOI: 10.11646/zootaxa.4876.1.1, http://zenodo.org/record/4423612