cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Bootstrap aggregation and confidence measures to improve time series causal discovery
Creators: name: Debeire, Kevin
name: Runge, Jakob
name: Gerhardus, Andreas
name: Eyring, Veronika
Publisher: name: arXiv
Year: 2023
Subjects: subject: Methodology (stat.ME)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: Learning causal graphs from multivariate time series is a ubiquitous challenge in all application domains dealing with time-dependent systems, such as in Earth sciences, biology, or engineering, to name a few. Recent developments for this causal discovery learning task have shown considerable skill, notably the specific time-series adaptations of the popular conditional independence-based learning framework. However, uncertainty estimation is challenging for conditional independence-based methods. Here, we introduce a novel bootstrap approach designed for time series causal discovery that preserves the temporal dependencies and lag structure. It can be combined with a range of time series causal discovery methods and provides a measure of confidence for the links of the time series graphs. Furthermore, next to confidence estimation, an aggregation, also called bagging, of the bootstrapped graphs by majority voting results in bagged causal discovery methods. In this work, we combine this approach with the state-of-the-art conditional-independence-based algorithm PCMCI+. With extensive numerical experiments we empirically demonstrate that, in addition to providing confidence measures for links, Bagged-PCMCI+ improves in precision and recall as compared to its base algorithm PCMCI+, at the cost of higher computational demands. These statistical performance improvements are especially pronounced in the more challenging settings (short time sample size, large number of variables, high autocorrelation). Our bootstrap approach can also be combined with other time series causal discovery algorithms and can be of considerable use in many real-world applications.
description: 29 pages, 18 figures, accepted at the 3rd Conference on Causal Learning and Reasoning (CLeaR 2024)
Petrobunidae Sharma and Giribet 2011
Creators: name: Zhang, Chao
name: Zhang, Feng
name: Sharma, Prashant P.
Publisher: name: Zenodo
Year: 2018
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Opiliones
Petrobunidae

description: Petrobunidae Sharma and Giribet, 2011
Petrobunidae Sharma & Giribet, 2011: 111.
Type genus: Petrobunus Sharma and Giribet, 2011. Genera included: Petrobunus Sharma and Giribet, 2011; Zalmoxida Roewer, 1912 [familial assignment by Sharma & Giribet (2011)].
description: Published as part of Zhang, Chao, Zhang, Feng & Sharma, Prashant P., 2018, Two new species of Petrobunus from China (Opiliones: Laniatores: Petrobunidae), pp. 51-64 in Zootaxa 4524 (1) on page 52, DOI: 10.11646/zootaxa.4524.1.3, http://zenodo.org/record/2610318
Additional file 8: Table S2. of Nascent osteoblast matrix inhibits osteogenesis of human mesenchymal stem cells in vitro
Creators: name: Kolf, Catherine
name: Song, Lin
name: Helm, Jeannine
name: Tuan, Rocky
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Space Science
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Protein symbols used for proteomic analysis. (DOCX 122 kb)
Node Cardinality Estimation in a Heterogeneous Wireless Network Deployed Over a Large Region Using a Mobile Base Station
Creators: name: Kadam, Sachin
name: Bhargao, Kaustubh S.
name: Kasbekar, Gaurav S.
Publisher: name: arXiv
Year: 2023
Subjects: subject: Networking and Internet Architecture (cs.NI)
subject: Signal Processing (eess.SP)
subject: FOS: Computer and information sciences
subject: FOS: Electrical engineering, electronic engineering, information engineering

description: We consider the problem of estimation of the node cardinality of each node type in a heterogeneous wireless network with $T$ types of nodes deployed over a large region, where $T \ge 2$ is an integer. A mobile base station (MBS), such as that mounted on an unmanned aerial vehicle, is used in such cases since a single static base station is not sufficient to cover such a large region. The MBS moves around in the region and makes multiple stops, and at the last stop, it is able to estimate the node cardinalities for the entire region. In this paper, two schemes, viz., HSRC-M1 and HSRC-M2, are proposed to rapidly estimate the number of nodes of each type. Both schemes have two phases, and they are performed at each stop. We prove that the node cardinality estimates computed using our proposed schemes are equal to, and hence as accurate as, the estimates that would have been obtained if a well-known estimation protocol designed for homogeneous networks in prior work were separately executed $T$ times. Closed-form expressions for the expected number of slots required by HSRC-M1 to execute and the expected energy consumption of a node under HSRC-M1 are computed. The problem of finding the optimal tour of the MBS around the region, which covers all the nodes and minimizes the travel cost of the MBS, is formulated and shown to be NP-complete, and a greedy algorithm is provided to solve it. Using simulations, it is shown that the numbers of slots required by the proposed schemes, HSRC-M1 and HSRC-M2, for computing node cardinality estimates are significantly less than the number of slots required for $T$ separate executions of the above estimation protocol for homogeneous networks.
description: Accepted for publication at the 'Journal of Network and Computer Applications' (https://www.sciencedirect.com/journal/journal-of-network-and-computer-applications). It is an expanded version of the paper, which was presented at the IEEE SPCOM 2020 conference. DOI: 10.1109/SPCOM50965.2020.9179541
Additional file 1: of Alcohol intake and associated risk of major cardiovascular outcomes in women compared with men: a systematic review and meta-analysis of prospective observational studies
Creators: name: Zheng, Yan-Ling
name: Lian, Feng
name: Shi, Qian
name: Zhang, Chi
name: Chen, Yi-Wei
name: Zhou, Yu-Hao
name: He, Jia
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Search strategy. (DOCX 13 kb)
Additional file 2: Table S1. of DNA methylation at birth within the promoter of ANRIL predicts markers of cardiovascular risk at 9Â years
Creators: name: Murray, Robert
name: Bryant, Jennifer
name: Titcombe, Phil
name: Barton, Sheila
name: Inskip, Hazel
name: Harvey, Nicholas
name: Cooper, Cyrus
name: Lillycrop, Karen
name: Hanson, Mark
name: Godfrey, Keith
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Plant Biology
subject: Computational Biology

description: Observed DNA methylation ranges for CpG dinucleotides quantified by pyrosequencing. CpG coordinates are provided in Hg19. Distance from transcriptional start site (TSS) in base pairs. Nâ  =â  132. (DOCX 14 kb)
Petrobunus Sharma and Giribet 2011
Creators: name: Zhang, Chao
name: Zhang, Feng
name: Sharma, Prashant P.
Publisher: name: Zenodo
Year: 2018
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Opiliones
Petrobunidae
Petrobunus

description: Petrobunus Sharma and Giribet, 2011
Petrobunus Sharma & Giribet, 2011: 112.
Type species: Petrobunus schwendingeri Sharma and Giribet, 2011, by original designation.
Distribution (Fig. 52). China (Chongqing, Hebei, Taiwan), Philippine (Palawan, Panay),
Expansion of Penis (Figs. 37–45). Due the hydraulic pressure the glans exhibit a mix of two movements: The capsula externa have an erection movement changing the position (90–100 degrees) respect to the truncus axis and the capsula interna is everted. As result of the capsula interna movement the parastylar lobes are completely everted and folded against the capsula externa and the stylus fully exposed.
description: Published as part of Zhang, Chao, Zhang, Feng & Sharma, Prashant P., 2018, Two new species of Petrobunus from China (Opiliones: Laniatores: Petrobunidae), pp. 51-64 in Zootaxa 4524 (1) on page 52, DOI: 10.11646/zootaxa.4524.1.3, http://zenodo.org/record/2610318
Ultrahigh-fidelity composite quantum phase gates
Creators: name: Gevorgyan, Hayk L.
name: Vitanov, Nikolay V.
Publisher: name: arXiv
Year: 2023
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: A number of composite pulse (CP) sequences for four basic quantum phase gates -- the Z, S, T and general phase gates -- are presented. The CP sequences contain up to 18 pulses and can compensate up to eight orders of experimental errors in the pulse amplitude and duration. The short CP sequences (up to 8 pulses) are calculated analytically and the longer ones numerically. The results demonstrate the remarkable flexibility of CPs accompanied by extreme accuracy and robustness to errors -- three features that cannot be simultaneously achieved by any other coherent control technique. These CP sequences, in particular the Z, S and T gates, can be very useful quantum control tools in quantum information applications, because they provide a variety of options to find the optimal balance between ultrahigh fidelity, error range and speed, which may be different in different physical applications.
description: arXiv admin note: text overlap with arXiv:2012.14692
Additional file 2: Table S1. of Alcohol intake and associated risk of major cardiovascular outcomes in women compared with men: a systematic review and meta-analysis of prospective observational studies
Creators: name: Zheng, Yan-Ling
name: Lian, Feng
name: Shi, Qian
name: Zhang, Chi
name: Chen, Yi-Wei
name: Zhou, Yu-Hao
name: He, Jia
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Computational Biology
subject: Cardiology

description: Adjustment factors of included studies. Figures S1. RR or RRR (female to male) of low alcohol intake and the risk of coronary disease. Figure S2. RR or RRR (female to male) of moderate alcohol intake and the risk of coronary disease. Figure S3. RR or RRR (female to male) of heavy alcohol intake and the risk of coronary disease. Figure S4. RR or RRR (female to male) of low alcohol intake and the risk of total mortality. Figure S5. RR or RRR (female to male) of moderate alcohol intake and the risk of total mortality. Figure S6. RR or RRR (female to male) of heavy alcohol intake and the risk of total mortality. Figure S7. RR or RRR (female to male) of low alcohol intake and the risk of ischemic stroke. Figure S8. RR or RRR (female to male) of low alcohol intake and the risk of cardiac death. Figure S9. RR or RRR (female to male) of low alcohol intake and the risk of stroke. Figure S10. RR or RRR (female to male) of moderate alcohol intake and the risk of cardiac death. Figure S11. RR or RRR (female to male) of moderate alcohol intake and the risk of stroke. Figure S12. RR or RRR (female to male) of moderate alcohol intake and the risk of ischemic stroke. Figure S13. RR or RRR (female to male) of heavy alcohol intake and the risk of cardiac death. Figure S14. RR or RRR (female to male) of heavy alcohol intake and the risk of stroke. Figure S15. RR or RRR (female to male) of heavy alcohol intake and the risk of ischemic stroke. Figure S16. Funnel plot of RRR (female to male) for low alcohol intake. Figure S17. Funnel plot of RRR (female to male) for moderate alcohol intake. Figure S18. Funnel plot of RRR (female to male) for heavy alcohol intake. (DOC 10344 kb)
On the mod 2 cohomology algebra of oriented Grassmannians
Creators: name: Jovanović, Milica
name: Prvulović, Branislav I.
Publisher: name: arXiv
Year: 2023
Subjects: subject: Algebraic Topology (math.AT)
subject: FOS: Mathematics

description: For $n\in\{2^t-3,2^t-2,2^t-1\}$ ($t\ge3$) we study the cohomology algebra $H^*(\widetilde G_{n,3};\mathbb Z_2)$ of the Grassmann manifold $\widetilde G_{n,3}$ of oriented $3$-dimensional subspaces of $\mathbb R^n$. A complete description of $H^*(\widetilde G_{n,3};\mathbb Z_2)$ is given in the cases $n=2^t-3$ and $n=2^t-2$, while in the case $n=2^t-1$ we obtain a description complete up to a coefficient from $\mathbb Z_2$.
description: 15 pages
Crossover From Cooper-Pair Hopping to Single-Electron Hopping in Pb$_x$(TiO$_2$)$_{1-x}$ Granular Films
Creators: name: He, Zhi-Hao
name: Han, Zi-Yan
name: Gao, Kuang-Hong
name: Wang, Zi-Wu
name: Li, Zhi-Qing
Publisher: name: arXiv
Year: 2023
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: The electrical transport properties of Pb$_x$(TiO$_2$)$_{1-x}$ ($x$ being the Pb volume fraction and ranging from $\sim$0.45 to $\sim$0.69) granular films are investigated experimentally. The charging energy of the Pb granules is reduced to less than the superconducting gap of Pb granules for the low temperature insulating films by using high-$k$ dielectric TiO$_2$ as the insulating matrix. For the insulating films in the vicinity of the superconductor-insulator transition, Cooper-pair hopping governs the low-temperature hopping transport. For these films, the low-temperature magnetoresistance is positive at low field and the resistivity vs temperature for Cooper-pair hopping obeys an Efros-Shklovsii-type variable-range-hopping law. A crossover from Cooper-pair-dominated hopping to single-electron-dominated hopping is observed with decreasing $x$. The emergence of single-electron-dominated hopping in the more insulating films is due to the causation that the intergrain Josephson coupling becomes too weak for Cooper pairs to hop between adjacent superconducting Pb granules.
description: 8 pages and 6 figures
Chaotic pattern dynamics on sun-melted snow
Creators: name: Mitchell, Kevin A.
Publisher: name: University of British Columbia
Year: 2008

description: This thesis describes the comparison of time-lapse field observations of suncups on alpine snow with numerical simulations. The simulations consist of solutions to a nonlinear partial differential equation which exhibits spontaneous pattern formation from a low amplitude, random initial surface. Both the field observations and the numerical solutions are found to saturate at a characteristic height and fluctuate chaotically with time. The timescale of these fluctuations is found to be instrumental in determining the full set of parameters for the numerical model such that it mimics the nonlinear dynamics of suncups. These parameters in turn are related to the change in albedo of the snow surface caused by the presence of suncups. This suggests the more general importance of dynamical behaviour in gaining an understanding of pattern formation phenomena.
Additional file 3: Table S3. of DNA methylation at birth within the promoter of ANRIL predicts markers of cardiovascular risk at 9Â years
Creators: name: Murray, Robert
name: Bryant, Jennifer
name: Titcombe, Phil
name: Barton, Sheila
name: Inskip, Hazel
name: Harvey, Nicholas
name: Cooper, Cyrus
name: Lillycrop, Karen
name: Hanson, Mark
name: Godfrey, Keith
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy
subject: Plant Biology

description: Correlation of the methylation levels between CpG sites. Pairwise Spearman correlation. (DOCX 15 kb)
Petrobunus Sharma & Giribet 2011
Creators: name: Zhang, Chao
name: Zhang, Feng
name: Sharma, Prashant P.
Publisher: name: Zenodo
Year: 2018
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Opiliones
Petrobunidae
Petrobunus

description: Key to species of Petrobunus
1 Ocularium armed with a median tubercle (Sharma & Giribet, 2011:119, fig. 11b)............................ P. torosus
- Ocularium unarmed.................................................................................... 2
2 Free tergites with conspicuous tubercles (Sharma & Giribet, 2011:116, fig. 7a; 118, fig. 10a)................... P. spinifer
- Free tergites with granules or unarmed..................................................................... 3
3 Dorsal scutum or Opisthosomal sternite unarmed in male.......................................... P. hebei sp. nov.
- Dorsal scutum or Opisthosomal sternite armed tubercles (Fig. 1) or spines (Sharma & Giribet, 2011:112, fig. 4b) in male... 4
4 Scutal area V and free tergites I and II of male armed with paired enlarged lateral tubercles, opisthosomal sternite 7 of male with two large setose spines............................................................. P. chongqing sp. nov.
- Dorsal scutum unmared that of tubercles, opisthosomal sternite 7 of male with four large setose spines..... P. schwendingeri
description: Published as part of Zhang, Chao, Zhang, Feng & Sharma, Prashant P., 2018, Two new species of Petrobunus from China (Opiliones: Laniatores: Petrobunidae), pp. 51-64 in Zootaxa 4524 (1) on page 52, DOI: 10.11646/zootaxa.4524.1.3, http://zenodo.org/record/2610318
R. v. Ah Yen & Ah Toy (7); Charged with breaking into and stealing from a shop; 1872/02/00
Creators: name: (:Null)
Publisher: name: The University of British Columbia
Year: 2019

description: Indictment, Ah Yen,Ah Toy; verdict guilty; sentence 3 years; Victoria; 1872/02/01 Information & complaint; of Wm. Bowden; 1872/02/02 Deposition of John Ward; 1872/02/03 Deposition of Wm. Bowden; with m/s drawing of site of incident; 1872/02/04 Deposition of John Turner; 1872/02/05 Deposition of David Rappitt; 1872/02/06 Depsoition of Ah Toe; 1872/02/06
Additional file 1: of Evidence and knowledge gaps on the disease burden in sexual and gender minorities: a review of systematic reviews
Creators: name: Blondeel, Karel
name: Say, Lale
name: Chou, Doris
name: Toskin, Igor
name: Rajat Khosla
name: Scolaro, Elisa
name: Temmerman, Marleen
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: Search strategy, PubMed, sexual and gender minorities. (DOCX 105 kb)
Extremal results on the Mostar index of trees with fixed parameters
Creators: name: Hayat, Fazal
name: Xu, Shou-Jun
Publisher: name: arXiv
Year: 2023
Subjects: subject: Combinatorics (math.CO)
subject: FOS: Mathematics
subject: 05C12, 05C90

description: For a graph $G$, the Mostar index of $G$ is the sum of $|n_u(e)$ - $n_v(e)|$ over all edges $e=uv$ of $G$, where $n_u(e)$ denotes the number of vertices of $G$ that have a smaller distance in $G$ to $u$ than to $v$, and analogously for $n_v(e)$. We determine all the graphs that maximize and minimize the Mostar index respectively over all trees in terms of some fixed parameters like the number of odd vertices, the number of vertices of degree two, and the number of pendent paths of fixed length.
Additional file 1: Table S2. of DNA methylation at birth within the promoter of ANRIL predicts markers of cardiovascular risk at 9Â years
Creators: name: Murray, Robert
name: Bryant, Jennifer
name: Titcombe, Phil
name: Barton, Sheila
name: Inskip, Hazel
name: Harvey, Nicholas
name: Cooper, Cyrus
name: Lillycrop, Karen
name: Hanson, Mark
name: Godfrey, Keith
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Plant Biology

description: Primers used for methylation analysis of ANRIL promoter. (DOCX 13 kb)
Additional file 1: of Heterogeneity in global gene expression profiles between biopsy specimens taken peri-surgically from primary ER-positive breast carcinomas
Creators: name: LĂłpez-Knowles, Elena
name: Gao, Qiong
name: Cheang, Maggie
name: Morden, James
name: Parker, Joel
name: Lesley-Ann Martin
name: Pinhel, Isabel
name: McNeill, Fiona
name: Hills, Margaret
name: Detre, Simone
name: Afentakis, Maria
name: Zabaglo, Lila
name: Dodson, Andrew
name: Skene, Anthony
name: Holcombe, Chris
name: Robertson, John
name: Smith, Ian
name: Bliss, Judith
name: Dowsett, Mitch
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Plant Biology

description: Supplementary information. Additional description of the materials and methods. (DOCX 24 kb)
R. v. Qutlnoh (5docs); Charged with murder; 1872/01/00
Creators: name: (:Null)
Publisher: name: The University of British Columbia
Year: 2019

description: Indictment for murder; of Mauchalach verdict guilty; sentence death, conducted on HMS Sparrowhawk, Fort Simpson; 1872/01/01 Deposition of Paiek; conducted by Wm . Duncan, interpreter of all Indian witnesses; 1872/01/02 Deposition of Neash-shah-naht; 1872/01/03 Deposition of Shalidsutin; 1872/01/04 Deposition of Qutlnoh, the accused; 1872/01/05
Additional file 3: Figure S1. of Heterogeneity in global gene expression profiles between biopsy specimens taken peri-surgically from primary ER-positive breast carcinomas
Creators: name: Lรณpez-Knowles, Elena
name: Gao, Qiong
name: Cheang, Maggie
name: Morden, James
name: Parker, Joel
name: Lesley-Ann Martin
name: Pinhel, Isabel
name: McNeill, Fiona
name: Hills, Margaret
name: Detre, Simone
name: Afentakis, Maria
name: Zabaglo, Lila
name: Dodson, Andrew
name: Skene, Anthony
name: Holcombe, Chris
name: Robertson, John
name: Smith, Ian
name: Bliss, Judith
name: Dowsett, Mitch
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Computational Biology

description: Paired correlations in study I. Correlation of detectable probes by Pearson correlation in 23 pairs of samples. Figure S2. Examples of paired correlations in study I. Correlation of detectable probes by Pearson correlation: the three samples with the highest correlations, median correlation and the lowest correlations. Figure S3. Correlation of 18 genes in study I. Pearson correlation of 18 genes commonly studied in breast cancer in 23 pairs of samples. Figure S4. Scatterplots of numeric differences between correlation coefficients to average gene expression profiles of intrinsic subtypes for each tumor in study I (S4A and B) and study II (S4C and D). Difference between luminal A and luminal B centroids (A and C), and luminal B and HER2-enriched centroids (C and D). Open circle: concordant subtype assignments between the two time points. Triangle: discordant subtype assignments between the two time points. Figure S5. Paired correlations in study II. Correlation of detectable probes by Pearson correlation in 56 pairs of samples. Figure S6. Correlations of 18 genes in study II. Pearson correlation of 18 genes commonly studied in breast cancer in 56 pairs of samples. (PDF 1479 kb)
Bolivar et le Congrès de Panama
Creators: name: Inconnu
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2024
Subjects: Télévision
''Bolivar et le congrès de Panama''

description: Annonce de la programmation du téléfilm ''Bolivar et le Congrès de Panama'' d'Eduardo Manet, sur la chaîne de télévision française Antenne 2, le 24 juin 1979. Une photo de l’acteur Michel Duchaussois illustre le programme.
description: Anuncio de la programación de la película para televisión ''Bolivar et le Congrès de Panama'' (''Bolívar y el Congreso de Panamá'') de Eduardo Manet, en el canal de televisión francés Antenne 2, el 24 de junio de 1979. Una fotografía del actor Michel Duchaussois ilustra el programa.
description: Notes : Traces de ruban adhésif à chaque coin de l’article.
description: Titre de la publication : Indéterminé.
description: Source: EM-E1-1979-06-00
description: Source: Localisation de la ressource : Centre de Recherches Latino-Américaines (CRLA–Archivos, ITEM UMR8132). MSHS - Bât. A5, 1er étage 5 rue Théodore Lefebvre - TSA21103. 86073 Poitiers cedex 9.
Additional file 8: Table S4. of TRAPLINE: a standardized and automated pipeline for RNA sequencing data analysis, evaluation and annotation
Creators: name: Wolfien, Markus
name: Rimmbach, Christian
name: Schmitz, Ulf
name: Jung, Julia
name: Krebs, Stefan
name: Steinhoff, Gustav
name: David, Robert
name: Wolkenhauer, Olaf
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: 60506 Virology

description: Exemplarily results of protein-protein interaction prediction, splice variants and multi promoter regions. (DOC 37 kb)
Micro flow control using thermally responsive polymer solutions
Creators: name: Bazargan, Vahid
Publisher: name: University of British Columbia
Year: 2008

description: Microfluidics refers to devices and methods for controlling and manipulating fluid flows at length scales less than a millimeter. Miniaturization of a laboratory to a small device, usually termed as lab-on-a-chip, is an advanced technology that integrates a microfluidic system including channels, mixers, reservoirs, pumps and valves on a micro scale chip and can manipulate very small sample volumes of fluids. While several flow control concepts for microfluidic devices have been developed to date, here flow control concepts based on thermally responsive polymer solutions are presented. In particular, flow control concepts base on the thermally triggered reversible phase change of aqueous solutions of the polymer Pluronic will be discussed. Selective heating of small regions of microfluidic channels, which leads to localized gel formation in these channels and reversible channel blockage, will be used to control a membrane valve that controls flow in a separate channel. This new technology will allow generating inexpensive portable bioanalysis tools where microvalve actuation occurs simply through heaters at a constant pressure source without a need for large external pressure control systems as is currently the case. Furthermore, a concept for controlled cross-channel transport of particles and potentially cells is presented that relies on the continuous regeneration of a gel wall at the diffusive interface of two co-streaming fluids in a microfluidic channel.
Differential recall bias in estimating treatment effects in observational studies
Creators: name: Bong, Suhwan
name: Lee, Kwonsang
name: Dominici, Francesca
Publisher: name: arXiv
Year: 2023
Subjects: subject: Methodology (stat.ME)
subject: FOS: Computer and information sciences

description: Observational studies are frequently used to estimate the effect of an exposure or treatment on an outcome. To obtain an unbiased estimate of the treatment effect, it is crucial to measure the exposure accurately. A common type of exposure misclassification is recall bias, which occurs in retrospective cohort studies when study subjects may inaccurately recall their past exposure. Particularly challenging is differential recall bias in the context of self-reported binary exposures, where the bias may be directional rather than random , and its extent varies according to the outcomes experienced. This paper makes several contributions: (1) it establishes bounds for the average treatment effect (ATE) even when a validation study is not available; (2) it proposes multiple estimation methods across various strategies predicated on different assumptions; and (3) it suggests a sensitivity analysis technique to assess the robustness of the causal conclusion, incorporating insights from prior research. The effectiveness of these methods is demonstrated through simulation studies that explore various model misspecification scenarios. These approaches are then applied to investigate the effect of childhood physical abuse on mental health in adulthood.
description: 26 pages, 2 figures, 3 tables. Supplementary materials are available. The R files are available at https://github.com/suhwanbong121/recall_bias_observational_study
Mycotretus bistrioculatus Alvarenga 1983
Creators: name: Pecci-Maddalena, Italo Salvatore de Castro
name: Lopes-Andrade, Cristiano
name: Skelley, Paul
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Erotylidae
Mycotretus
Mycotretus bistrioculatus

description: 1. Mycotretus bistrioculatus Alvarenga, 1983
Mycotretus bistrioculatus Alvarenga, 1983: 583. Type locality: “ BRASIL, Amazonas, Estirão do Equador (coordenadas aproximadas, long 71º38’W e lat 4º33’S)”.
Mycotretus bistrioculatus – Alvarenga 1994: 21.
Primary type
Holotype (Fig. 2A)
BRAZIL • ♂ (dissected); “Coleção M. Alvarenga [printed] \ HOLOTIPO [red label, printed] \ Estirão do Equador, Amazonas, Brasil X.1979, M. Alvarenga [printed] \ M [printed] \ Mycotretus bistrioculatus m. [handwritten] M. Alvarenga det. [printed] 1983 [handwritten]”; MNRJ.
Other specimens examined
BRAZIL • 1 ♀ (dissected); “Coleção M. Alvarenga [printed] \ Paratipo [red label, printed] \ Estirão do Equador, Amazonas, Brasil X.1979, M. Alvarenga [printed] \ M [printed] \ Mycotretus bistrioculatus m. [handwritten] M. Alvarenga det. [printed] 1983 [handwritten]”; MNRJ.
Distribution
North Brazil.
Remarks
Penile flagellum elongated, thin, sclerotized at the anterior third of virga and with a desclerotized portion (approximately 2× the length of head) connecting virga and head. Head V-shaped, each arm separating from each other anteriorly and ending in two outer tips slightly bent laterally. Mycotretus bistrioculatus is similar to M. argus (Fig. 26F), M. sexoculatus chaparensis (Fig. 12D) and M. pulchellus (Fig. 34F) in body shape and arrangement of circular elytral spots. There are few morphological differences in the flagellar head (e.g., lateral borders more or less elongated, sclerotized). The status of these species requires examining more specimens, which will be studied in future research.
description: Published as part of Pecci-Maddalena, Italo Salvatore de Castro, Lopes-Andrade, Cristiano & Skelley, Paul, 2023, Catalogue of Mycotretus Lacordaire, 1842 (Coleoptera: Erotylidae: Tritomini): an annotated, illustrated and historical approach, pp. 1-182 in European Journal of Taxonomy 876 (1) on pages 16-17, DOI: 10.5852/ejt.2023.876.2149, http://zenodo.org/record/8095647
Additional file 4: Figure S2. of “Hit-and-Run” transcription: de novo transcription initiated by a transient bZIP1 “hit” persists after the “run”
Creators: name: Doidy, Joan
name: Li, Ying
name: Neymotin, Benjamin
name: Edwards, Molly
name: Kranthi Varala
name: Gresham, David
name: Coruzzi, Gloria
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Gene ontology enrichment of bZIP1 targets. GO term enrichment for induced (A) and repressed (B) bZIP1 targets from the 4tU-labeled fractions was performed using agriGO (Toolkit and Database for Agricultural Community, [31]). Significant GO terms were selected from a singular enrichment analysis using Arabidopsis genome (TAIR10) as a reference with an FDR cutoff of 5 %. Significant GO terms levels are highlighted from light yellow to dark red colors. (PDF 2008 kb)
Additional file 5: Figure S3 of “Hit-and-Run” transcription: de novo transcription initiated by a transient bZIP1 “hit” persists after the “run”
Creators: name: Doidy, Joan
name: Li, Ying
name: Neymotin, Benjamin
name: Edwards, Molly
name: Kranthi Varala
name: Gresham, David
name: Coruzzi, Gloria
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases
subject: Computational Biology

description: Comparative figure of the mRNA profiles of TF targets assayed by the TARGET [6, 15] and TARGET-tU methodologies. Both methods are comparable and allowed us to provide genome-wide evidence for a “hit-and-run” model of transcription, however the methods can also provide complementary insights based on difference in mRNA populations scored. In detail, TARGET [6, 15] measures the steady-state pools of mRNA targets accumulated during the 5 hours time of TF-nuclear localization (mRNA profiles 1 and 2, blue lines), while TARGET-tU captures mRNA targets actively transcribed when introducing 4-thiouracil (4tU), 5 hours after the TF nuclear import (mRNA profiles 2 and 3, red lines). Using the new TARGET-tU methodology, we captured a subset of 73 actively transcribed transient targets that overlap with the steady state assays (also see Fig. 3). (PDF 61 kb)
Measurement of the production branching ratios following nuclear muon capture for palladium isotopes using the in-beam activation method
Creators: name: Niikura, M.
name: Saito, T. Y.
name: Matsuzaki, T.
name: Ishida, K.
name: Hillier, A.
Publisher: name: arXiv
Year: 2023
Subjects: subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: Background: The energy distribution of excited states populated by the nuclear muon capture reaction can facilitate an understanding of the reaction mechanism; however, experimental data are fairly sparse. Purpose: We developed a new methodology, called the in-beam activation method, to measure the production probability of residual nuclei by muon capture. For the first application of the new method, we have measured muon-induced activation of five isotopically-enriched palladium targets. Methods: The experiment was conducted at the RIKEN-RAL muon facility of the Rutherford Appleton Facility in the UK. The pulsed muon beam impinged on the palladium targets and gamma rays from the beta and isomeric decays from the reaction residues were measured using high-purity germanium detectors in both the in-beam and offline setups. Results: The production branching ratios of the residual nuclei of muon capture for five palladium isotopes with mass numbers A = 104, 105, 106, 108, and 110 were obtained. The results were compared with a model calculation using the particle and heavy ion transport system (PHITS) code. The model calculation well reproduces the experimental data. Conclusion: For the first time, this study provides experimental data on the distribution of production branching ratios without any theoretical estimation or assumptions in the interpretation of the data analysis
description: 21 pages, 12 figures
[Carnet de voyage (autour du mime)]
Creators: name: Jacques, Lecoq
name: Lecoq, Jacques
name: Compagnie Jacques Lecoq
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2024
Subjects: ''Carnet de voyage (autour du mime)''
Théâtre
Pantomime
Lecoq, Jacques

description: Représentation par la Compagnie Jacques Lecoq du spectacle ''Carnet de voyage (autour du mime)'', au Théâtre de la Cité Universitaire - Maison Internationale - de Paris (14e). Au programme : ''Les disputes'', ''Pierrot va dans la lune'', ''De l’autre coté de la montagne'', ''Passage'', ''Les trois soldats'' et ''Le raid'', mises en scène par Jacques Lecoq. Parmi les acteurs, Eduardo Manet. Présentation de Jacques Lecoq et extraits de presse.
description: Función de la Compañía Jacques Lecoq del espectáculo ''Carnet de voyage (en torno al mimo)'', en el Théâtre de la Cité Universitaire - Maison Internationale - de París (distrito 14). En el programa: “Les disputes”, “Pierrot va dans la lune”, ''De l’autre coté de la montagne'', ''Passage'', ''Les trois soldats'' y ''Le raid'', dirigidas por Jacques Lecoq. Entre los actores, Eduardo Manet. Presentación de Jacques Lecoq y fragmentos de la prensa.
description: Source: EM-C1-1-1959-06-03
description: Source: Localisation de la ressource : Centre de Recherches Latino-Américaines (CRLA–Archivos, ITEM UMR8132). MSHS - Bât. A5, 1er étage 5 rue Théodore Lefebvre - TSA21103. 86073 Poitiers cedex 9.
Closeness Centralities of Lollipop Graphs
Creators: name: Dangalchev, Chavdar
Publisher: name: arXiv
Year: 2023
Subjects: subject: Discrete Mathematics (cs.DM)
subject: Combinatorics (math.CO)
subject: FOS: Computer and information sciences
subject: FOS: Mathematics
subject: 90C35, 05C35, 05C09

description: Closeness is one of the most studied characteristics of networks. Residual closeness is a very sensitive measure of graphs robustness. Additional closeness is a measure of growth potentials of networks. In this article we calculate the closeness, vertex residual closeness, link residual closeness, and additional closeness of lollipop graphs.
Additional file 7: Figure S3. of TRAPLINE: a standardized and automated pipeline for RNA sequencing data analysis, evaluation and annotation
Creators: name: Wolfien, Markus
name: Rimmbach, Christian
name: Schmitz, Ulf
name: Jung, Julia
name: Krebs, Stefan
name: Steinhoff, Gustav
name: David, Robert
name: Wolkenhauer, Olaf
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 60506 Virology

description: Pie chart illustrating enriched biological processes of upregulated genes in the aCaB derived cardiomyocytes. The chart presents the enriched GO superclasses. (DOC 26 kb)
R. Peter ( 2 docs); Charged with breaking into & stealing; 1872/04/00
Creators: name: (:Null)
Publisher: name: The University of British Columbia
Year: 2019

description: -Indictment of Peter; stealing 2 loaves of bread & cash; verdict guilty; sentence 6 months hard labor; 1872/04/01 -Jury‟s verdict; guilty verdict with recommendations on account of good character; 1872/04/02
Additional file 1: Table S1. of “Hit-and-Run” transcription: de novo transcription initiated by a transient bZIP1 “hit” persists after the “run”
Creators: name: Doidy, Joan
name: Li, Ying
name: Neymotin, Benjamin
name: Edwards, Molly
name: Kranthi Varala
name: Gresham, David
name: Coruzzi, Gloria
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Molecular Biology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Plant Biology

description: Comparative tables of the experimental designs (A) and bioinformatics analyses (B) between TARGET [6, 15] and TARGET-tU. (PDF 90 kb)
Mycotretus fragosoi Alvarenga 1983
Creators: name: Pecci-Maddalena, Italo Salvatore de Castro
name: Lopes-Andrade, Cristiano
name: Skelley, Paul
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Erotylidae
Mycotretus
Mycotretus fragosoi

description: 2. Mycotretus fragosoi Alvarenga, 1983
Mycotretus fragosoi Alvarenga, 1983: 587. Type locality: “ BRASIL, Amazonas, Estirão do Equador (coordenadas aproximadas, long 71º38’W e lat 4º33’S)”.
Mycotretus fragosoi – Alvarenga 1994: 26.
Primary type
Holotype (Fig. 2B)
BRAZIL • “Coleção M. Alvarenga [printed] \ HOLOTIPO [red label, printed] \ Estirão do Equador, Amazonas, Brasil X.1979, M. Alvarenga [printed] \ M [printed] \ Mycotretus fragosi m. [handwritten] M. Alvarenga det. [printed] 1983 [handwritten]”; MNRJ.
Remarks
New junior synonym of M. signatellus Crotch, 1876 (Fig. 11B, see below).
description: Published as part of Pecci-Maddalena, Italo Salvatore de Castro, Lopes-Andrade, Cristiano & Skelley, Paul, 2023, Catalogue of Mycotretus Lacordaire, 1842 (Coleoptera: Erotylidae: Tritomini): an annotated, illustrated and historical approach, pp. 1-182 in European Journal of Taxonomy 876 (1) on page 17, DOI: 10.5852/ejt.2023.876.2149, http://zenodo.org/record/8095647
Additional file 2: Figure S1. of “Hit-and-Run” transcription: de novo transcription initiated by a transient bZIP1 “hit” persists after the “run”
Creators: name: Doidy, Joan
name: Li, Ying
name: Neymotin, Benjamin
name: Edwards, Molly
name: Kranthi Varala
name: Gresham, David
name: Coruzzi, Gloria
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Biochemistry
subject: Space Science
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Cell Biology
subject: Molecular Biology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: FOS: Biological sciences
subject: 60506 Virology
subject: Computational Biology

description: Experimental design. (A) Vector maps of the pBeaconRFP construct containing 35S::GR::bZIP1 [6, 15] and the pJD385 empty vector (EV) control containing a 35S::GR cassette. (B) A 20 minute exposure to 4tU was sufficient to detect significant incorporation in RNA fractions of Arabidopsis cells, as shown by dot blot imaging of 1 μg RNA from 4.5 106 cells exposed to 1.5 mM 4tU (+) or uracil only (−). (PDF 36 kb)
Mycotretus lopesi M. Alvarenga 1989
Creators: name: Pecci-Maddalena, Italo Salvatore de Castro
name: Lopes-Andrade, Cristiano
name: Skelley, Paul
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Erotylidae
Mycotretus
Mycotretus lopesi

description: 3. Mycotretus lopesi Alvarenga, 1989
Mycotretus lopesi Alvarenga, 1989: 35. Type locality: “ BRASIL, Pará: Jacareacanga”.
Mycotretus lopesi – Alvarenga 1994: 28.
Primary type
Holotype (Fig. 2C)
BRAZIL • ♀ (dissected); “Coleção M. Alvarenga [printed] \ HOLOTIPO [red label, printed] \ Jacareacanga, Pará, Brasil, XII–1968, M. Alvarenga [printed] \ Mycotretus lopesi M. Alvarenga, 19 [handwritten]”; MNRJ.
Remarks
New junior synonym of M. reticulatus Crotch, 1876 (Fig. 10C, see below).
description: Published as part of Pecci-Maddalena, Italo Salvatore de Castro, Lopes-Andrade, Cristiano & Skelley, Paul, 2023, Catalogue of Mycotretus Lacordaire, 1842 (Coleoptera: Erotylidae: Tritomini): an annotated, illustrated and historical approach, pp. 1-182 in European Journal of Taxonomy 876 (1) on page 17, DOI: 10.5852/ejt.2023.876.2149, http://zenodo.org/record/8095647
Additional file 4: Table S1. of TRAPLINE: a standardized and automated pipeline for RNA sequencing data analysis, evaluation and annotation
Creators: name: Wolfien, Markus
name: Rimmbach, Christian
name: Schmitz, Ulf
name: Jung, Julia
name: Krebs, Stefan
name: Steinhoff, Gustav
name: David, Robert
name: Wolkenhauer, Olaf
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology

description: Performance comparison of TRAPLINE vs other tools. (DOC 28 kb)
Additional file 6: Figure S4. of “Hit-and-Run” transcription: de novo transcription initiated by a transient bZIP1 “hit” persists after the “run”
Creators: name: Doidy, Joan
name: Li, Ying
name: Neymotin, Benjamin
name: Edwards, Molly
name: Kranthi Varala
name: Gresham, David
name: Coruzzi, Gloria
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Science Policy
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics

description: A second ChIP-Seq replication confirms that transient targets are no longer bound by bZIP1 but stay in a transcriptionally active state. A. A comparison of the target overlap identified from the two ChIP-Seq replications performed 5 hours after bZIP1 nuclear import. The first replication of the bZIP1 ChIP-Seq (initially performed in [6]) yielded 850 targets bound by bZIP1 and the second replication (this study) yielded 431 targets bound by bZIP1 (also see Additional file 3: Dataset S1). Here, we obtained 300 common targets between the two replications, this represents a 70 % overlap relative to the replication performed in this study. (B, D) ChIP-Seq binding 1 kb upstream and downstream of the transcription start site (TSS) for 10 additional transient class III targets 5 hours after induced nuclear localization of bZIP1. The stacked plots present the first replication of the bZIP1 ChIP-Seq initially performed in [6] (ChIP-Seq replication 1, top panel) and the second replication performed in in this study (ChIP-Seq replication 2, bottom panel). (C, E) Gene expression levels of 10 additional examples of transient bZIP1 targets in 4tU-labeled fractions of bZIP1 expressing cells (4tU-bZIP1) compared to 4tU-labeled fractions of empty vector (4tU-EV; *FDR
MOESM1 of Illumina Miseq platform analysis caecum bacterial communities of rex rabbits fed with different antibiotics
Creators: name: Fuqin Zou
name: Zeng, Dong
name: Wen, Bin
name: Sun, Hao
name: Zhou, Yi
name: Mingyue Yang
name: Zhirong Peng
name: Shuai Xu
name: Hesong Wang
name: Xiangchao Fu
name: Du, Dan
name: Zeng, Yan
name: Zhu, Hui
name: Kangcheng Pan
name: Jing, Bo
name: Wang, Ping
name: Xueqin Ni
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy

description: Additional file 1. Additional tables.