cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Sexual Functioning Among Endometrial Cancer Patients Treated With Adjuvant High-Dose-Rate Intra-Vaginal Radiation Therapy
Creators: name: Goldfarb, Shari
name: Basch, Ethan
name: Barakat, Richard
name: Eaton, Anne
name: Bennett, Antonia
name: Jewell, Elizabeth
name: Atkinson, Thomas
name: Mosenkis, Jeffrey
name: Damast, Shari
name: Carter, Jeanne
name: Leitao, Mario
name: Alektiar, Kaled M.
name: Patil, Sujata
Publisher: name: The University of North Carolina at Chapel Hill University Libraries
Year: 2012

description: Purpose—We used the Female Sexual Function Index (FSFI) to investigate the prevalence of sexual dysfunction (SD) and factors associated with diminished sexual functioning in early stage endometrial cancer (EC) patients treated with simple hysterectomy and adjuvant brachytherapy. Methods and Materials—A cohort of 104 patients followed in a radiation oncology clinic completed questionnaires to quantify current levels of sexual functioning. The time interval between hysterectomy and questionnaire completion ranged from <6 months to >5 years. Multivariate regression was performed using the FSFI as a continuous variable (score range, 1.2–35.4). SD was defined as an FSFI score of <26, based on the published validation study. Results—SD was reported by 81% of respondents. The mean (±standard deviation) domain scores in order of highest-to-lowest functioning were: satisfaction, 2.9 (±2.0); orgasm, 2.5 (±2.4); desire, 2.4 (±1.3); arousal, 2.2 (±2.0); dryness, 2.1 (±2.1); and pain, 1.9 (±2.3). Compared to the index population in which the FSFI cut-score was validated (healthy women ages 18–74), all scores were low. Compared to published scores of a postmenopausal population, scores were not statistically different. Multivariate analysis isolated factors associated with lower FSFI scores, including having laparotomy as opposed to minimally invasive surgery (effect size, −7.1 points; 95% CI, −11.2 to −3.1; P<.001), lack of vaginal lubricant use (effect size, −4.4 points; 95% CI, −8.7 to −0.2, P = .040), and short time interval (<6 months) from hysterectomy to questionnaire completion (effect size, −4.6 points; 95% CI, −9.3–0.2; P = .059). Conclusions—The rate of SD, as defined by an FSFI score <26, was prevalent. The postmenopausal status of EC patients alone is a known risk factor for SD. Additional factors associated with poor sexual functioning following treatment for EC included receipt of laparotomy and lack of vaginal lubricant use.
Coherent water transport across the South Atlantic
Creators: name: Wang, Y.
name: Olascoaga, M. J.
name: Beron-Vera, F. J.
Publisher: name: arXiv
Year: 2015
Subjects: subject: Atmospheric and Oceanic Physics (physics.ao-ph)
subject: Fluid Dynamics (physics.flu-dyn)
subject: Geophysics (physics.geo-ph)
subject: FOS: Physical sciences

description: The role of mesoscale eddies in transporting Agulhas leakage is investigated using a recent technique from nonlinear dynamical systems theory applied on geostrophic currents inferred from the over two-decade-long satellite altimetry record. Eddies are found to acquire material coherence away from the Agulhas retroflection, near the Walvis Ridge in the South Atlantic. Yearly, 1 to 4 coherent material eddies are detected with diameters ranging from 40 to 280 km. A total of 23 eddy cores of about 50 km in diameter and with at least 30\pct of their contents traceable into the Indian Ocean were found to travel across the subtropical gyre with minor filamentation. Only 1 eddy core was found to pour its contents on the North Brazil Current. While ability of eddies to carry Agulhas leakage northwestward across the South Atlantic is supported by our analysis, this is more restricted than suggested by earlier ring transport assessments.
description: In press
Feasibility and Delivery of Patient-Reported Outcomes in Clinical Practice Among Racially Diverse Bladder and Prostate Cancer Patients
Creators: name: McCabe, Sean D.
name: Tan, Hung-Jui
name: Smith, Angela B.
name: Mahbooba, Zahra M.
name: Chen, Ronald C.
name: Bennett, Antonia V.
name: Pruthi, Raj
name: Mueller, Dana E.
name: Deal, Allison
name: Jonsson, Mattias
name: Chung, Arlene E.
name: Wang, Andrew
name: Samuel, Cleo A.
name: Basch, Ethan
name: Wallen, Eric
name: Reeve, Bryce B.
name: Nielsen, Matthew E.
Publisher: name: The University of North Carolina at Chapel Hill University Libraries
Year: 2020

description: Objective: To assess the feasibility of enrollment and collecting PRO data as part of routine clinical urologic care for bladder and prostate cancer patients and examine overall patterns and racial variations in PRO use and symptom reports over time.
Subjects/Patients and Methods: We recruited 76 patients (n=29 Black and n=47 White) with prostate or bladder cancer at a single, comprehensive cancer center. The majority of prostate cancer patients had intermediate risk (57%) disease and underwent either radiation or prostatectomy. Over half (58%) of bladder cancer patients had muscle invasive disease and underwent cystectomy.
Patients were asked to complete PRO symptom surveys using their preferred mode [web- or phone-based interactive voice response (IVR)]. Symptom summary reports were shared with providers during visits. Surveys were completed at three time points and assessed urinary, sexual, gastrointestinal, anxiety/depression, and sleep symptoms. Feasibility of enrollment and survey completion were calculated, and linear mixed effects models estimated differences in outcomes by race and time.
Results: 63% of study participants completed all PRO measures at all three time points. Black patients were more likely to select IVR as their survey mode (40% vs 13%, p<0.05), and less likely to complete all surveys (55% vs 74%, p=0.13). Patients using IVR were also less likely to complete all surveys (41% vs 69%, p=0.046).
Conclusion: Reported preferences for survey mode and completion rates differ by race, which may influence survey completion rates and highlight potential obstacles for equitable implementation of PROs into clinical care.
Additional file 1 of Associated bacteria of a pine sawyer beetle confer resistance to entomopathogenic fungi via fungal growth inhibition
Creators: name: Deng, Jundan
name: Xu, Weikang
name: Lv, Guochang
name: Yuan, Hang
name: Zhang, Qing-He
name: Wickham, Jacob D.
name: Xu, Letian
name: Zhang, Longwa
Publisher: name: figshare
Year: 2022
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 1: Fig. S1. Traditional isolating culturing Monochamus alternatus larvae gut (n = 3) homogenates on LB agar plates and TSA mediums indicated the efficiency of gut bacteria removal (a). Via universal 16S rRNA gene primers, we performed quantitative real-time reverse transcription polymerase chain reaction (qPCR) tested on M. alternatus larvae (n = 5) midgut homogenates (b). *P < 0.05. Fig. S2. Phylogenetic relationships among associated bacteria from Monochamus alternatus larvae and accepted type strains from their genera. Analysis showed that the 16s rRNA gene of C4-2-2L, B1-S1-1L and C1-1-2L isolate was clustered with Enterobacter soli ATCC BAA-2102 (98.92% percent identity), Pseudomonas protegens strain CHAO (100.00% percent identity), and Serratia marcescens strain NBRC (99.71% percent identity) respectively. Fig. S3. Phenoloxidase (PO) relative activity was evaluated from hemocyte of the Monochamus alternatus larvae. Beauveria bassiana infection results in PO activity increase in Axenic group. Bars with different letters are significantly different (P < 0.05).
(502087) George Frederick W. Wilkinson
Creators: name: Professions, Victorian
Publisher: name: University of Oxford
Year: 2022
Subjects: subject: 220201 Business and Labour History
subject: FOS: Philosophy, ethics and religion
subject: History
subject: 140203 Economic History
subject: FOS: Economics and business

description: This three-year research project began in January 2014 and investigated whether, during the Victorian period, the professions formed a distinct self-sustaining social group with its own mores and values. The project looked at 16,000 individuals drawn from census data for Alnwick, Brighton, Bristol, Dundee, Greenock, Leeds, Merthyr Tydfil, Morpeth, and Winchester. The research project was funded by the UK Economic & Social Research Council and was based at the Universities of Oxford and Northumbria.
Evaluating the Efficacy of Therapies in Patients With Coronavirus Disease 2019
Creators: name: Lin, D.-Y.
name: Zeng, D.
name: Eron, J.J.
Publisher: name: NLM (Medline)
Year: 2021

description: There is a proliferation of clinical trials worldwide to find effective therapies for patients diagnosed with coronavirus disease 2019 (COVID-19). The endpoints that are currently used to evaluate the efficacy of therapeutic agents against COVID-19 are focused on clinical status at a particular day or on time to a specific change of clinical status. To provide a full picture of the clinical course of a patient and make complete use of available data, we consider the trajectory of clinical status over the entire follow-up period. We also show how to combine the evidence of treatment effects on the occurrences of various clinical events. We compare the proposed and existing endpoints through extensive simulation studies. Finally, we provide guidelines on establishing the benefits of treatments.
Covariant Perturbations of f(R) Black Holes: The Weyl Terms
Creators: name: Pratten, Geraint
Publisher: name: arXiv
Year: 2015
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: In this paper we revisit non-spherical perturbations of the Schwarzschild black hole in the context of $f(R)$ gravity. Previous studies were able to demonstrate the stability of the $f(R)$ Schwarzschild black hole against gravitational perturbations in both the even and odd parity sectors. In particular, it was seen that the Regge-Wheeler and Zerilli equations in $f(R)$ gravity obey the same equations as their General Relativity counterparts. More recently, the 1+1+2 semi-tetrad formalism has been used to derive a set of two wave equations: one for transverse, trace-free (tensor) perturbations and one for the additional scalar modes that characterise fourth-order theories of gravitation. The master variable governing tensor perturbations was shown to be a modified Regge-Wheeler tensor obeying the same equation as in General Relativity. However, it is well known that there is a non-uniqueness in the definition of the master variable. In this paper we derive a set of two perturbation variables and their concomitant wave equations that describe gravitational perturbations in a covariant and gauge invariant manner. These variables can be related to the Newman-Penrose (NP) Weyl scalars as well as the master variables from the 2+2 formalism.
description: 20 pages. 1 Figure. Published in CQG
Additional file 1 of How are the mealtime experiences of people in residential aged care facilities informed by policy and best practice guidelines? A scoping review
Creators: name: Koh, Rui Ting Grace
name: Thirumanickam, Abirami
name: Attrill, Stacie
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy

description: Additional file 1. Population, Concept, Context Terms Generated.
(502088) Laura Emily Wilkinson
Creators: name: Professions, Victorian
Publisher: name: University of Oxford
Year: 2022
Subjects: subject: 220201 Business and Labour History
subject: FOS: Philosophy, ethics and religion
subject: History
subject: 140203 Economic History
subject: FOS: Economics and business

description: This three-year research project began in January 2014 and investigated whether, during the Victorian period, the professions formed a distinct self-sustaining social group with its own mores and values. The project looked at 16,000 individuals drawn from census data for Alnwick, Brighton, Bristol, Dundee, Greenock, Leeds, Merthyr Tydfil, Morpeth, and Winchester. The research project was funded by the UK Economic & Social Research Council and was based at the Universities of Oxford and Northumbria.
(502090) Kate Isabel Wilkinson
Creators: name: Professions, Victorian
Publisher: name: University of Oxford
Year: 2022
Subjects: subject: 220201 Business and Labour History
subject: FOS: Philosophy, ethics and religion
subject: History
subject: 140203 Economic History
subject: FOS: Economics and business

description: This three-year research project began in January 2014 and investigated whether, during the Victorian period, the professions formed a distinct self-sustaining social group with its own mores and values. The project looked at 16,000 individuals drawn from census data for Alnwick, Brighton, Bristol, Dundee, Greenock, Leeds, Merthyr Tydfil, Morpeth, and Winchester. The research project was funded by the UK Economic & Social Research Council and was based at the Universities of Oxford and Northumbria.
Wattenmeerplan 2010
Creators: name: Ministry of the Environment; Danish Forest and Nature Agency, Denmark
name: Federal Ministry For The Environment, Nature Conservation
name: Minstry Of Agriculture, Nature
Publisher: name: Zenodo
Year: 2010
Subjects: Ökologie
Strategie/ Aktionsplan
Schutz und Management

description: Der Wattenmeerplan (WSP-2010) stellt im Einklang mit der Gemeinsamen Erklärung zum Schutz des Wattenmeeres einen Rahmen für das integrierte Management des Wattenmeergebiets als ökologische Einheit sowie seinerLandschafts-und Kulturwerteinnerhalb der kulturellen Einheitenbereit. Er legt eine Reihe von gemeinsamen Zielen sowie Politiken, Maßnahmen, Projekteund Aktionen zur Erreichung dieser Ziele dar, die von den Wattenmeerländern umgesetzt werden sollen.
Additional file 2 of How are the mealtime experiences of people in residential aged care facilities informed by policy and best practice guidelines? A scoping review
Creators: name: Koh, Rui Ting Grace
name: Thirumanickam, Abirami
name: Attrill, Stacie
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy

description: Additional file 2. Specific Search Terms.
title: Harmonic weak Maass forms and periods II
Creators: name: Alfes, Claudia
name: Bruinier, Jan Hendrik
name: Schwagenscheidt, Markus
Publisher: name: Springer
Year: 2025

description: In this paper we investigate the Fourier coefficients of harmonic Maass forms of negative half-integral weight. We relate the algebraicity of these coefficients to the algebraicity of the coefficients of certain canonical meromorphic modular forms of positive even weight with poles at Heegner divisors. Moreover, we give an explicit formula for the coefficients of harmonic Maass forms in terms of periods of certain meromorphic modular forms with algebraic coefficients.
Seismogenic compression in southern Italy? Morphotectonic analysis to detect possible evidence of Late Quaternary tectonics along the Southern Apennine Outer Front
Creators: name: Ferrarini, Federica
name: J Ramón Arrowsmith
name: Brozzetti, Francesco
name: Nardis, Rita De
name: Cirillo, Daniele
name: Lavecchia, Giusy
Publisher: name: Zenodo
Year: 2019

description: Earthquakes are a major natural hazard for the Mediterranean area and Italy is one of the countries where they still belong among the deadliest disasters. Earthquakes occurred in the last fifteen years in central-southern Italy (S. Giuliano di Puglia 2002 Mw 5.4, l'Aquila 2009 Mw 6.3, Norcia 2016 Mw 6.5) confirm the significant vulnerability of buildings, even when exposed to moderately energetic shocks. Additionally, in some areas, peculiar geological setting and low-deformation rates often challenge the need to outline active faults. The Apennine compressional Outer Front (AOF) well fits this frame.
 The AOF traverses mainland Italy and connects with the E-W Maghrebian chain in Sicily. It is clearly seismogenic along the northern and central sectors and similar behaviour is attributed to the Sicilian Outer Front. Differently, it is often considered inactive in southern Italy (SAOF) where the orogenic activity ceased at the beginning of the Middle Pleistocene and the front is buried under Plio-Quaternary foredeep successions. This setting agrees with the lack of recent compressive instrumental seismicity along the SAOF.
 We started to investigate part of this structural element (Abruzzo and Molise regions) along the Adriatic piedmont and in the foothill areas where a tectonic uplift phase is reported in the Middle-Late Pleistocene (0.2 mm/y). We performed morphometric analysis on the fluvial network to detect possible transient response to late Quaternary tectonic activity. As well, we used the distribution of normalized channel steepness index to infer relative magnitudes of rock uplift. We compared map distribution of knick points, ksn values and relief maps along with the main geological, lithological and structural features known for the area.
 Our approach in the study area highlighted as smaller rivers flowing in the piedmont/coastal sectors, tend to show vertical step- knick points, especially along their tributaries, and despite to the clayey lithology. Differently, rivers characterized by wide catchments mostly exhibit anomalous convexities (upstream in the trunk and in a more inner position, e.g. Frentani Mts area), suggesting possible 'non-equilibrium' conditions. Both the channel steepness- and relief maps are consistent with these results. These results seem to suggest locally higher rock uplift rates, supporting the existence of tectonic signals related to Late Quaternary shortening along the SAOF.
ADCIRC Water Level Data Assimilation via Pseudo Atmospheric Pressure
Creators: name: Blanton, Brian
name: Luettich, Rick
name: Asher, Taylor
name: Fleming, Jason
Publisher: name: The University of North Carolina at Chapel Hill University Libraries
Year: 2017

description: Forecasting storm surge deals with unknowns. This presentation goes over some of those unknowns: where and when the event will happen, forecast meteorological conditions and antecedent meteorological and oceanographic conditions.  Finally it discusses how ADCIRC can deal with them.
(502085) Isabella Challoner
Creators: name: Professions, Victorian
Publisher: name: University of Oxford
Year: 2022
Subjects: subject: 220201 Business and Labour History
subject: FOS: Philosophy, ethics and religion
subject: History
subject: 140203 Economic History
subject: FOS: Economics and business

description: This three-year research project began in January 2014 and investigated whether, during the Victorian period, the professions formed a distinct self-sustaining social group with its own mores and values. The project looked at 16,000 individuals drawn from census data for Alnwick, Brighton, Bristol, Dundee, Greenock, Leeds, Merthyr Tydfil, Morpeth, and Winchester. The research project was funded by the UK Economic & Social Research Council and was based at the Universities of Oxford and Northumbria.
Measurement of a false electric dipole moment signal from $^{199}$Hg atoms exposed to an inhomogeneous magnetic field
Creators: name: Afach, S.
name: Baker, C. A.
name: Ban, G.
name: Bison, G.
name: Bodek, K.
name: Chowdhuri, Z.
name: Daum, M.
name: Fertl, M.
name: Franke, B.
name: Geltenbort, P.
name: Green, K.
name: van der Grinten, M. G. D.
name: Grujic, Z.
name: Harris, P. G.
name: Heil, W.
name: Hélaine, V.
name: Henneck, R.
name: Horras, M.
name: Iaydjiev, P.
name: Ivanov, S. N.
name: Kasprzak, M.
name: Kermaïdic, Y.
name: Kirch, K.
name: Knowles, P.
name: Koch, H. -C.
name: Komposch, S.
name: Kozela, A.
name: Krempel, J.
name: Lauss, B.
name: Lefort, T.
name: Lemière, Y.
name: Mtchedlishvili, A.
name: Naviliat-Cuncic, O.
name: Pendlebury, J. M.
name: Piegsa, F. M.
name: Pignol, G.
name: Prashant, P. N.
name: Quéméner, G.
name: Rebreyend, D.
name: Ries, D.
name: Roccia, S.
name: Schmidt-Wellenburg, P.
name: Severijns, N.
name: Weis, A.
name: Wursten, E.
name: Wyszynski, G.
name: Zejma, J.
name: Zenner, J.
name: Zsigmond, G.
Publisher: name: arXiv
Year: 2015
Subjects: subject: Atomic Physics (physics.atom-ph)
subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: We report on the measurement of a Larmor frequency shift proportional to the electric-field strength for $^{199}{\rm Hg}$ atoms contained in a volume permeated with aligned magnetic and electric fields. This shift arises from the interplay between the inevitable magnetic field gradients and the motional magnetic field. The proportionality to electric-field strength makes it apparently similar to an electric dipole moment (EDM) signal, although unlike an EDM this effect is P- and T-conserving. We have used a neutron magnetic resonance EDM spectrometer, featuring a mercury co-magnetometer and an array of external cesium magnetometers, to measure the shift as a function of the applied magnetic field gradient. Our results are in good agreement with theoretical expectations.
Wadden Sea Plan 2010
Creators: name: Ministry of the Environment; Danish Forest and Nature Agency, Denmark
name: Federal Ministry For The Environment, Nature Conservation
name: Minstry Of Agriculture, Nature
Publisher: name: Zenodo
Year: 2010
Subjects: subject: Biodiversity
subject: Conservation
subject: Monitoring
subject: Ecology
subject: FOS: Biological sciences
subject: Management
subject: Sustainable development
subject: Strategy/ action plan

description: The Trilateral Wadden Sea Plan (WSP) is the common policy and management plan for the protection and sustainable management of the Wadden Sea Area. It is also the common management plan for the Wadden Sea World Heritage Site. A unique and basic feature of the Wadden Sea Plan is that it aims at achieving the full scala of habitats, which belong to a natural and dynamic Wadden Sea. Each of these habitats, for which common trilateral Targets have been adopted, needs a certain quality (natural dynamics, absence of anthropogenic disturbance, absence of pollution), which can be reached by proper management of the area.
Additional file 3 of How are the mealtime experiences of people in residential aged care facilities informed by policy and best practice guidelines? A scoping review
Creators: name: Koh, Rui Ting Grace
name: Thirumanickam, Abirami
name: Attrill, Stacie
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy

description: Additional file 3. Number of Results from Database and Engine Search.
Mott-Kondo Insulator Behavior in the Iron Oxychalcogenides
Creators: name: Freelon, B.
name: Liu, Yu Hao
name: Chen, Jeng-Lung
name: Craco, L.
name: Laad, M. S.
name: Leoni, S.
name: Chen, Jiaqi
name: Tao, Li
name: Wang, Hangdong
name: Flauca, R.
name: Yamani, Z.
name: Fang, Minghu
name: Chang, Chinglin
name: Guo, J. -H.
name: Hussain, Z.
Publisher: name: arXiv
Year: 2015
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences
subject: revtex4

description: We perform a combined experimental-theoretical study of the Fe-oxychalcogenides (FeO$\emph{Ch}$) series La$_{2}$O$_{2}$Fe$_{2}$O\emph{M}$_{2}$ (\emph{M}=S, Se), which is the latest among the Fe-based materials with the potential \ to show unconventional high-T$_{c}$ superconductivity (HTSC). A combination of incoherent Hubbard features in X-ray absorption (XAS) and resonant inelastic X-ray scattering (RIXS) spectra, as well as resitivity data, reveal that the parent FeO$\emph{Ch}$ are correlation-driven insulators. To uncover microscopics underlying these findings, we perform local density approximation-plus-dynamical mean field theory (LDA+DMFT) calculations that unravel a Mott-Kondo insulating state. Based upon good agreement between theory and a range of data, we propose that FeO$\emph{Ch}$ may constitute a new, ideal testing ground to explore HTSC arising from a strange metal proximate to a novel selective-Mott quantum criticality.
Multi-wavelength Polarimetry and Variability Study of M87 Jet
Creators: name: Avachat, Sayali S
name: Perlman, Eric S
name: Sparks, William B
name: Cara, Mihai
name: Owen, Frazer N
Publisher: name: arXiv
Year: 2014
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: We present a high resolution polarimetry and variability study of the M87 jet using VLA and HST data taken during 2002 to 2008. Both data-sets have an angular resolution as high as 0.06$"$, which is 2-3 times better than previous observations. New morphological details are revealed in both the optical and radio, which can help to reveal the energetic and magnetic field structure of the jet. By comparing the data with previously published HST and VLA observations, we show that the jet$'$s morphology in total and polarized light is changing significantly on timescales of $\sim$a decade. We compare the evolution of the inner jet (particularly the nucleus and knot HST-1), when our observations overlap with the multi-wavelength monitoring campaigns conducted with HST and Chandra. We use these data to comment on particle acceleration and main emission processes.
description: To appear in the Proceedings of the IAU Symposium No. 313 Extragalactic jets from every angle, Galapagos, Ecuador, 15-19 September 2014, F. Massaro, C. C. Cheung, E. Lopez, and A. Siemiginowska (Eds.), Cambridge University Press
CINECA Populated minimal metadata model for project cohorts - D3.4
Creators: name: Brinkman
Publisher: name: Zenodo
Year: 2023
Subjects: metadata
GECKO
harmonisation

description: To support human cohort genomic and other “omic” data discovery and analysis across jurisdictions, basic data such as cohort participant age, sex, etc needs to be harmonised. Developing a key “minimal metadata model” of these basic attributes which should be recorded with all cohorts is critical to aid initial querying across jurisdictions for suitable dataset discovery. We review here the creation of a minimal metadata model, and provide populated example datasets, noting the model’s utility and impact and linking to additional ontologies and other tools developed to aid these efforts.
Additional file 10 of An experimental model for ovarian cancer: propagation of ovarian cancer initiating cells and generation of ovarian cancer organoids
Creators: name: Chen, Yu-An
name: Lu, Chen-Yu
name: Cheng, Wen-Fang
name: Kuo, Kuan-Ting
name: Yu, Chen-Wei
name: Ho, Hon-Nerng
name: Chen, Hsin-Fu
name: Pan, Szu-Hua
Publisher: name: figshare
Year: 2022
Subjects: subject: Biophysics
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology

description: Additional file 10: Figure S9. Expression of pluripotent genes and the correlation with OS in public OC dataset. (A) The analysis of dataset from UCSC XENA browser (http://xena.ucsc.edu). Correlation of each single marker with OS in 376 patients with primary OC from GDC TCGA Ovarian Cancer (OV) cohort. (B) Thebox plot of gene expression level with histologic grade. *P < 0.05 was consideredsignificant.
(502086) William Challoner Wilkinson
Creators: name: Professions, Victorian
Publisher: name: University of Oxford
Year: 2022
Subjects: subject: 220201 Business and Labour History
subject: FOS: Philosophy, ethics and religion
subject: History
subject: 140203 Economic History
subject: FOS: Economics and business

description: This three-year research project began in January 2014 and investigated whether, during the Victorian period, the professions formed a distinct self-sustaining social group with its own mores and values. The project looked at 16,000 individuals drawn from census data for Alnwick, Brighton, Bristol, Dundee, Greenock, Leeds, Merthyr Tydfil, Morpeth, and Winchester. The research project was funded by the UK Economic & Social Research Council and was based at the Universities of Oxford and Northumbria.
(502080) Robert Wilkinson
Creators: name: Professions, Victorian
Publisher: name: University of Oxford
Year: 2022
Subjects: subject: 220201 Business and Labour History
subject: FOS: Philosophy, ethics and religion
subject: History
subject: 140203 Economic History
subject: FOS: Economics and business

description: This three-year research project began in January 2014 and investigated whether, during the Victorian period, the professions formed a distinct self-sustaining social group with its own mores and values. The project looked at 16,000 individuals drawn from census data for Alnwick, Brighton, Bristol, Dundee, Greenock, Leeds, Merthyr Tydfil, Morpeth, and Winchester. The research project was funded by the UK Economic & Social Research Council and was based at the Universities of Oxford and Northumbria.
Penguin contributions to CP phases in $B_{d,s}$ decays to charmonium
Creators: name: Frings, Philipp
name: Nierste, Ulrich
name: Wiebusch, Martin
Publisher: name: arXiv
Year: 2015
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The precision of the CP phases $2β$ and $2β_s$ determined from the mixing-induced CP asymmetries in $B_d\to J/ψK_S$ and $B_s\to J/ψϕ$, respectively, is limited by the unknown long-distance contribution of a penguin diagram involving up quarks. The penguin contribution is expected to be comparable in size to the precision of the LHCb and Belle II experiments and therefore limits the sensitivity of the measured quantities to new physics. We analyze the infrared QCD structure of this contribution and find that all soft and collinear divergences either cancel between different diagrams or factorize into matrix elements of local four-quark operators up to terms suppressed by $Λ_{QCD}/m_ψ$, where $m_ψ$ denotes the $J/ψ$ mass. Our results, which are based on an operator product expansion, allow us to calculate the penguin-to-tree ratio $P/T$ in terms of the matrix elements of these operators and to constrain the penguin contribution to the phase $2β$ as $|Δϕ_d|\leq {0.68}^\circ$. The penguin contribution to $2β_s$ is bounded as $|Δϕ_s^{0}|\leq {0.97}^\circ$, $|Δϕ_s^{\parallel}|\leq {1.22}^\circ$, and $|Δϕ_s^{\perp}|\leq {0.99}^\circ$ for the case of longitudinal, parallel, and perpendicular $ϕ$ and $J/ψ$ polarizations, respectively. We further place bounds on $|Δϕ_d|$ for $B_d\to ψ(2S) K_S$ and the polarization amplitudes in $B_d\to J/ψK^*$. In our approach it is further possible to constrain $P/T$ for decays in which $P/T$ is Cabibbo-unsuppressed and we derive upper limits on the penguin contribution to the mixing-induced CP asymmetries in $B_d\to J/ψπ^0$, $B_d\to J/ψρ^0$, $B_s\to J/ψK_S$, and $B_s\to J/ψK^*$. For all studied decay modes we also constrain the sizes of the direct CP asymmetries.
description: typo in Eqs. (2) and (3) corrected, references updated.Matches version published in PRL
Additional file 13 of An experimental model for ovarian cancer: propagation of ovarian cancer initiating cells and generation of ovarian cancer organoids
Creators: name: Chen, Yu-An
name: Lu, Chen-Yu
name: Cheng, Wen-Fang
name: Kuo, Kuan-Ting
name: Yu, Chen-Wei
name: Ho, Hon-Nerng
name: Chen, Hsin-Fu
name: Pan, Szu-Hua
Publisher: name: figshare
Year: 2022
Subjects: subject: Biophysics
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology

description: Additional file 13: Figure S12. Expression of pluripotent genes and the correlation with OS in an EOC tissue array. (A) Correlation of each single marker with OS in patients with EOC. Statistical analysis was carried out using SPSS 22.0 (IBM Corp., Armonk, NY, USA). Kaplan–Meier curves were used to evaluate the correlation of highly expressed markers with OS. Comparisons of two groups were made by the log-rank test. *P < 0.05 was considered significant. (B) The correlation of the numbers of highly expressed markers with the OS in patients with EOC. Kaplan–Meier curves were used to evaluate the correlation of the number of highly expressed markers with OS. Comparisons of two groups were made by the log-rank test. *P < 0.05 was considered to indicate significance.
(502081) James Thompson Wilkinson
Creators: name: Professions, Victorian
Publisher: name: University of Oxford
Year: 2022
Subjects: subject: 220201 Business and Labour History
subject: FOS: Philosophy, ethics and religion
subject: History
subject: 140203 Economic History
subject: FOS: Economics and business

description: This three-year research project began in January 2014 and investigated whether, during the Victorian period, the professions formed a distinct self-sustaining social group with its own mores and values. The project looked at 16,000 individuals drawn from census data for Alnwick, Brighton, Bristol, Dundee, Greenock, Leeds, Merthyr Tydfil, Morpeth, and Winchester. The research project was funded by the UK Economic & Social Research Council and was based at the Universities of Oxford and Northumbria.
Additional file 11 of An experimental model for ovarian cancer: propagation of ovarian cancer initiating cells and generation of ovarian cancer organoids
Creators: name: Chen, Yu-An
name: Lu, Chen-Yu
name: Cheng, Wen-Fang
name: Kuo, Kuan-Ting
name: Yu, Chen-Wei
name: Ho, Hon-Nerng
name: Chen, Hsin-Fu
name: Pan, Szu-Hua
Publisher: name: figshare
Year: 2022
Subjects: subject: Biophysics
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology

description: Additional file 11: Figure S10. Array Comparative Genomic Hybridization (aCGH).aCGH was performed with OVCAR-3 and iOVCAR-3-OSKM for genome-wide screening. aCGH analysis confirmed a 45, XX karyotype of OVCAR-3 and iOVCAR-OSKM, and the consistent detectable geneticalteration.
(502084) Mary Wilkinson
Creators: name: Professions, Victorian
Publisher: name: University of Oxford
Year: 2022
Subjects: subject: 220201 Business and Labour History
subject: FOS: Philosophy, ethics and religion
subject: History
subject: 140203 Economic History
subject: FOS: Economics and business

description: This three-year research project began in January 2014 and investigated whether, during the Victorian period, the professions formed a distinct self-sustaining social group with its own mores and values. The project looked at 16,000 individuals drawn from census data for Alnwick, Brighton, Bristol, Dundee, Greenock, Leeds, Merthyr Tydfil, Morpeth, and Winchester. The research project was funded by the UK Economic & Social Research Council and was based at the Universities of Oxford and Northumbria.
Additional file 14 of An experimental model for ovarian cancer: propagation of ovarian cancer initiating cells and generation of ovarian cancer organoids
Creators: name: Chen, Yu-An
name: Lu, Chen-Yu
name: Cheng, Wen-Fang
name: Kuo, Kuan-Ting
name: Yu, Chen-Wei
name: Ho, Hon-Nerng
name: Chen, Hsin-Fu
name: Pan, Szu-Hua
Publisher: name: figshare
Year: 2022
Subjects: subject: Biophysics
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology

description: Additional file 14: Figure S13. Expression of pluripotent genes and the correlation with OS in HGSOC cases of an EOC tissue array. (A) Correlation of each single marker with OS in eight patients with HGSOC. Statistical analysis was carried out using SPSS 22.0 (IBM Corp., Armonk, NY, USA). Kaplan–Meier curves were used to evaluate the correlation of highly expressed markers with OS. Comparisons of two groups were made by the log-rank test. *P < 0.05 was considered significant. (B) The correlation of the numbers of highly expressed markers with the OS in eight patients with HGSOC. Kaplan–Meier curves were used to evaluate the correlation of the number of highly expressed markers with OS. Comparisons of two groups were made by the log-rank test. *P < 0.05 was considered to indicate significance.
Additional file 1 of An experimental model for ovarian cancer: propagation of ovarian cancer initiating cells and generation of ovarian cancer organoids
Creators: name: Chen, Yu-An
name: Lu, Chen-Yu
name: Cheng, Wen-Fang
name: Kuo, Kuan-Ting
name: Yu, Chen-Wei
name: Ho, Hon-Nerng
name: Chen, Hsin-Fu
name: Pan, Szu-Hua
Publisher: name: figshare
Year: 2022
Subjects: subject: Biophysics
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology

description: Additional file 1: Table S1. Antibody details. Table S2. Oligonucleotide primer sequences. Table S3. Summary of induced ovarian cancer initiating cell (iOCIC) generation. Table S4. The tumor incidence in the dose test in vivo. Table S5. Baseline characteristics of EOC patients in tissue array. Table S6. OCT4, SOX2 and NANOG expression in EOC tumor tissues of tissue array. Table S7. Co-expression of OCT4, SOX2 and NANOG in EOC tumor tissues of tissue array. Table S8. Expression of OCT4, SOX2 and NANOG in eight HGSOC tumor tissues of tissue array.
Cosmic rays: the spectrum and chemical composition from $10^{10}$ to $10^{20}$ eV
Creators: name: Peixoto, C. J. Todero
name: de Souza, Vitor
name: Biermann, Peter L.
Publisher: name: arXiv
Year: 2015
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: The production of energetic particles in the universe remains one of the great mysteries of modern science. The mechanisms of acceleration in astrophysical sources and the details about the propagation through the galactic and extragalactic media are still to be defined. In recent years, the cosmic ray flux has been measured with high precision in the energy range from \energy{10} to \energyEV{20.5} by several experiments using different techniques. In some energy ranges, it has been possible to determine the flux of individual elements (hydrogen to iron nuclei). This paper explores an astrophysical scenario in which only our Galaxy and the radio galaxy Cen A produce all particles measured on Earth in the energy range from \energy{10} to \energyEV{20.5}. Data from AMS-02, CREAM, KASCADE, KASCADE-Grande and the Pierre Auger Observatories are considered. The model developed here is able to describe the total and individual particle flux of all experiments considered. It is shown that the theory used here is able to describe the smooth transition from space-based to ground-based measurements. The flux of each element as determined by KASCADE and KASCADE-Grande and the mass sensitivity parameter \xmax measured by the Pierre Auger Observatory above \energyEV{18} are also explored within the framework of the model. The transition from \energy{16} to \energyEV{18} is carefully analyzed. It is shown that the data measured in this energy range suggest the existence of an extra component of cosmic rays yet to be understood.
Reconsidering domestication from a process archaeology perspective
Creators: name: Frantz, L.
name: Stépanoff, C.
name: Gilbert, T.
name: Bogaard, A.
name: Denham, T.
name: Weide, A.
name: Larson, G.
name: Allaby, R.
name: Fuller, D.
name: Manin, A.
name: Crowley, S.
name: Bendrey, R.
name: Marshall, F.
name: Peters, J.
name: Cucchi, T.
name: Karlsson, E.
name: Mueller, N.
name: Arbuckle, B.S.
Publisher: name: Routledge
Year: 2021

description: Process philosophy offers a metaphysical foundation for domestication studies. This grounding is especially important given the European colonialist origin of ‘domestication’ as a term and 19th century cultural project. We explore the potential of process archaeology for deep-time investigation of domestication relationships, drawing attention to the variable pace of domestication as an ongoing process within and across taxa; the nature of domestication ‘syndromes’ and ‘pathways’ as general hypotheses about process; the importance of cooperation as well as competition among humans and other organisms; the significance of non-human agency; and the ubiquity of hybrid communities that resist the simple wild/domestic dichotomy.
Landau Level Quantization and Almost Flat Modes in Three-dimensional Semi-metals with Nodal Ring Spectra
Creators: name: Rhim, Jun-Won
name: Kim, Yong Baek
Publisher: name: arXiv
Year: 2015
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We investigate novel Landau level structures of semi-metals with nodal ring dispersions. When the magnetic field is applied parallel to the plane in which the ring lies, there exist almost non-dispersive Landau levels at the Fermi level (E_F = 0) as a function of the momentum along the field direction inside the ring. We show that the Landau levels at each momentum along the field direction can be described by the Hamiltonian for the graphene bilayer with fictitious inter-layer couplings under a tilted magnetic field. Near the center of the ring where the inter-layer coupling is negligible, we have Dirac Landau levels which explain the appearance of the zero modes. Although the inter-layer hopping amplitudes become finite at higher momenta, the splitting of zero modes is exponentially small and they remain almost flat due to the finite artificial in-plane component of the magnetic field. The emergence of the density of states peak at the Fermi level would be a hallmark of the ring dispersion.
description: 5 pages, 2 figures
Additional file 12 of An experimental model for ovarian cancer: propagation of ovarian cancer initiating cells and generation of ovarian cancer organoids
Creators: name: Chen, Yu-An
name: Lu, Chen-Yu
name: Cheng, Wen-Fang
name: Kuo, Kuan-Ting
name: Yu, Chen-Wei
name: Ho, Hon-Nerng
name: Chen, Hsin-Fu
name: Pan, Szu-Hua
Publisher: name: figshare
Year: 2022
Subjects: subject: Biophysics
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology

description: Additional file 12: Figure S11. Uncropped gel of Figure S8B. Pluripotentgene expression and SeV silencing in iCA5171-OSKM clones. Expression of endogenouspluripotent genes (OCT4, SOX2, KLF4, and NANOG), SeV, and the housekeeping gene GAPDH. Neg Ctl: negative control (PCR mixture without cDNA).
ГЕНЕТИЧЕСКИЙ ПОЛИМОРФИЗМ ГЕНА ФРУКТОЗА 1,6-ДИФОСФАТАЗЫ И ЕГО СВЯЗЬ С МЕТАБОЛИЧЕСКИМИ РАССТРОЙСТВАМИ
Creators: name: Маматкулова, Дилафруз
Publisher: name: Zenodo
Year: 2023

description: Генетический полиморфизм гена фруктоза 1,6-дифосфатазы (ФРУ-1,6-ДФК) является предметом широкого исследования среди научного сообщества в области генетики и метаболизма. Этот ген играет ключевую роль в регуляции обмена углеводов и может оказывать влияние на развитие метаболических расстройств.
О возможности использования гравитационных сил для выполнения работы
Creators: name: Khmelnik, Solomon
Publisher: name: Zenodo
Year: 2020

description: Доказывается, что источник консервативных сил (и, в том числе, гравитационных сил) совершает работу по замкнутым траекториям движения множества тел, если эти тела не связаны жестко и между ними действуют силы, зависящие от скорости движения этих тел
Quantum fluctuation theorems and power measurements
Creators: name: Venkatesh, B. Prasanna
name: Watanabe, Gentaro
name: Talkner, Peter
Publisher: name: arXiv
Year: 2015
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Quantum Gases (cond-mat.quant-gas)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Work in the paradigm of the quantum fluctuation theorems of Crooks and Jarzynski is determined by projective measurements of energy at the beginning and end of the force protocol. In analogy to classical systems, we consider an alternative definition of work given by the integral of the supplied power determined by integrating up the results of repeated measurements of the instantaneous power during the force protocol. We observe that such a definition of work, in spite of taking account of the process dependence, has different possible values and statistics from the work determined by the conventional two energy measurement approach (TEMA). In the limit of many projective measurements of power, the system's dynamics is frozen in the power measurement basis due to the quantum Zeno effect leading to statistics only trivially dependent on the force protocol. In general the Jarzynski relation is not satisfied except for the case when the instantaneous power operator commutes with the total Hamiltonian at all times. We also consider properties of the joint statistics of power-based definition of work and TEMA work in protocols where both values are determined. This allows us to quantify their correlations. Relaxing the projective measurement condition, weak continuous measurements of power are considered within the stochastic master equation formalism. Even in this scenario the power-based work statistics is in general not able to reproduce qualitative features of the TEMA work statistics.
description: 26 pages, 9 figures
Ancient DNA shows domestic horses were introduced in the southern caucasus and anatolia during the bronze age
Creators: name: Arbuckle, B.S.
name: Uerpmann, H.-P.
name: Chazin, H.
name: Buitenhuis, H.
name: Grange, T.
name: Adcock, S.E.
name: Peters, J.
name: Geigl, E.-M.
name: Manaseryan, N.
name: Guimaraes, S.
Publisher: name: American Association for the Advancement of Science
Year: 2020

description: Despite the important roles that horses have played in human history, particularly in the spread of languages and cultures, and correspondingly intensive research on this topic, the origin of domestic horses remains elusive. Several domestication centers have been hypothesized, but most of these have been invalidated through recent paleogenetic studies. Anatolia is a region with an extended history of horse exploitation that has been considered a candidate for the origins of domestic horses but has never been subject to detailed investigation. Our paleogenetic study of pre- and protohistoric horses in Anatolia and the Caucasus, based on a diachronic sample from the early Neolithic to the Iron Age (~8000 to ~1000 BCE) that encompasses the presumed transition from wild to domestic horses (4000 to 3000 BCE), shows the rapid and large-scale introduction of domestic horses at the end of the third millennium BCE. Thus, our results argue strongly against autochthonous independent domestication of horses in Anatolia.