cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Potential Effects of St. Lawrence Seaway on Costs of Transporting Grain
Creators: name: Haldeman, Robert C.
name: Haldeman, Robert C.
Publisher: name: Unknown
Year: 1959
Subjects: subject: Crop Production/Industries
subject: International Relations/Trade
subject: Marketing
subject: FOS: Economics and business
subject: Productivity Analysis

description: Excerpts from the report Preface: This study of the effects of the St. Lawrence Seaway on the costs of transporting United States grain is part of a broad program of research by the Agricultural Marketing Service, U. S. Department of Agriculture, to improve the marketing of agricultural commodities. There is much interest among producers, operators of country and terminal elevators and terminal markets, carriers, and other groups in the influence the St. Lawrence Seaway will have on grain transportation routes and marketing channels. This report compares the charges to shippers and the costs to transportation agencies for transporting grain from selected areas of production to domestic markets, and also to foreign markets, via the St. Lawrence Seaway and via other routings. A comparative analysis indicates the transportation benefits that the St. Lawrence Seaway can provide, and defines the tributary areas affected.
Additional file 4 of Metabolic syndrome increases senescence-associated micro-RNAs in extracellular vesicles derived from swine and human mesenchymal stem/stromal cells
Creators: name: Li, Yongxin
name: Meng, Yu
name: Zhu, Xiangyang
name: Saadiq, Ishran M.
name: Jordan, Kyra L.
name: Eirin, Alfonso
name: Lerman, Lilach O.
Publisher: name: figshare
Year: 2020
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Chemical Sciences not elsewhere classified
subject: Astronomical and Space Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Computational Biology

description: Additional file 3: Table S3.
Spin-spiral formalism based on the multiple scattering Green's function technique with applications to ultrathin magnetic films and multilayers
Creators: name: Simon, Eszter
name: Szunyogh, Laszlo
Publisher: name: arXiv
Year: 2019
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Based on the Korringa-Kohn-Rostoker Green's function technique we present a computational scheme for calculating the electronic structure of layered systems with homogeneous spin-spiral magnetic state. From the self-consistent non-relativistic calculations the total energy of the spin-spiral states is determined as a function of the wave vector, while a relativistic extension of the formalism in first order of the spin-orbit coupling gives an access to the effect of the Dzyaloshinskii-Moriya interactions. We demonstrate that the newly developed method properly describes the magnetic ground state of a Mn monolayer on W(001) and that of a Co monolayer on Pt(111). The obtained spin-spiral energies are mapped to a classical spin model, the parameters of which are compared to those calculated directly from the relativistic torque method. In case of the Co/Pt(111) system we find that the isotropic interaction between the Co atoms is reduced and the Dzyaloshinskii-Moriya interaction is increased when capped by a Ru layer. In addition, we perform spin-spiral calculations on Ir/Fe/Co/Pt and Ir/Co/Fe/Pt multilayer systems and find a spin-spiral ground state with very long wavelength due to the frustrated isotropic couplings between the Fe atoms, whereas the Dzyaloshinskii-Moriya interaction strongly depends on the sequence of the Fe and Co layers.
description: 14 pages, 7 figures,
Direct Investigation of Superparamagnetism in Co Nanoparticle Films
Creators: name: Woods, S. I.
name: Kirtley, J. R.
name: Sun, Shouheng
name: Koch, R. H.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Condensed Matter (cond-mat)
subject: FOS: Physical sciences

description: A direct probe of superparamagnetism was used to determine the complete anisotropy energy distribution of Co nanoparticle films. The films were composed of self-assembled lattices of uniform Co nanoparticles 3 nm or 5 nm in diameter, and a variable temperature scanning-SQUID microscope was used to measure temperature-induced spontaneous magnetic noise in the samples. Accurate measurements of anisotropy energy distributions of small volume samples will be critical to magnetic optimization of nanoparticle devices and media.
description: 4 pages, 4 figures. Submitted to Physical Review Letters
Tracking Local Mechanical Impact in Heterogeneous Polymers with Direct Optical Imaging
Creators: name: Filonenko, Georgy A.
name: Lugger, Jody A. M.
name: Liu, Chong
name: Heeswijk, Ellen P. A. Van
name: Hendrix, Marco M. R. M.
name: Weber, Manuela
name: Müller, Christian
name: Hensen, Emiel J. M.
name: Sijbesma, Rint P.
name: Pidko, Evgeny A.
Publisher: name: Freie Universität Berlin
Year: 2018
Subjects: subject: copper
subject: luminescence
subject: mechanical properties
subject: molecular dynamics
subject: polymers
subject: 600 Technik, Medizin, angewandte Wissenschaften::660 Chemische Verfahrenstechnik::660 Chemische Verfahrenstechnik

description: Structural heterogeneity defines the properties of many functional polymers and it is often crucial for their performance and ability to withstand mechanical impact. Such heterogeneity, however, poses a tremendous challenge for characterization of these materials and limits our ability to design them rationally. Herein we present a practical methodology capable of resolving the complex mechanical behavior and tracking mechanical impact in discrete phases of segmented polyurethane—a typical example of a structurally complex polymer. Using direct optical imaging of photoluminescence produced by a small‐molecule organometallic mechano‐responsive sensor we observe in real time how polymer phases dissipate energy, restructure, and breakdown upon mechanical impact. Owing to its simplicity and robustness, this method has potential in describing the evolution of complex soft‐matter systems for which global characterization techniques fall short of providing molecular‐level insight.
Trieces nitifrons
Creators: name: Kolarov, Janko
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Ichneumonidae
Trieces
Trieces nitifrons

description: Trieces nitifrons (THOMSON, 1887)
M a t e r i a l: BG*: Razgradski heights, Trubatch vill., 23.05- 30.05.1999, 1; 30.05- 6.06.1999, 1; 19.06- 3.07.1999, 9 1; 18.07- 8.08.1999, 1; 8- 22.08.1999, 1 2.
D i s t r i b u t i o n: Sweden, Finland, Netherlands and Ukraine.
description: Published as part of Kolarov, Janko, 2014, Metopiinae (Hymenoptera: Ichneumonidae) from Bulgaria and related regions, pp. 1343-1351 in Linzer biologische Beiträge 46 (2) on page 1349, DOI: 10.5281/zenodo.5310241
Global Stability of an SEIR Epidemic Model where Empirical Distribution of Incubation Period has Approximated by Coxian Distribution
Creators: name: Kim, Sungchan
name: Byun, Jong Hyuk
name: Jung, Il Hyo
Publisher: name: arXiv
Year: 2019
Subjects: subject: Populations and Evolution (q-bio.PE)
subject: Dynamical Systems (math.DS)
subject: Physics and Society (physics.soc-ph)
subject: FOS: Biological sciences
subject: FOS: Mathematics
subject: FOS: Physical sciences

description: In this work, we have developed a Coxian distributed SEIR model in incorporating an empirical incubation period. We show that the global dynamics are completely determined by a basic reproduction number. An application of the Coxian distributed SEIR model using data of an empirical incubation period is explored. The model may be useful for resolving causing the realistic intrinsic parts in classical epidemic models since Coxian distribution approximately converges to any distribution.
Psittacus barrabandi Kuhl 1820
Creators: name: Voisin, Claire
name: Voisin, Jean-François
Publisher: name: Zenodo
Year: 2008
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Aves
Psittaciformes
Psittacidae
Psittacus
Psittacus barrabandi

description: Psittacus Barrabandi Kuhl, 1820
 Psittacus Barrabandi Kuhl, 1820: 61.
 IDENTITÉ. — Pionospitta barrabandi (Kuhl, 1820).
SPÉCIMEN TYPE. — Holotype par monotypie: C.G. 2004- 74 (A.C. 1231; N.C. 136). — Inscriptions sous le socle: Brésil / M. Baillon / 1231 / Caïca barrabandi / (Kuhl) / L [mention barrée] /Type. — Étiquette du socle: Caïca barrabandi / (Kuhl) / Type / M. Baillon Brésil.
LOCALITÉ TYPE. — Brésil.
REMARQUES
 Kuhl (1820) précise que le spécimen qu’il décrit se trouve « in Museo Parisiensi ». Il désigne «Vaillant » comme auteur du nom de ce taxon, mais François Le Vaillant utilisait des noms français et a nommé ce taxon: « Perruche Caïca Barraband ».
Le nom de M. Baillon désigne soit Jean François Emmanuel Baillon père (1742-1802), soit plus probablement son fils Louis Antoine François Baillon (1778-1855), tous deux collectionneurs d’oiseaux et correspondants du MNHN (Voisin & Voisin 1991).
description: Published as part of Voisin, Claire & Voisin, Jean-François, 2008, Liste des types d'oiseaux des collections du Muséum national d'Histoire naturelle de Paris. 16: Perroquets (Psittacidae), pp. 463-499 in Zoosystema 30 (2) on page 478, DOI: 10.5281/zenodo.5402150
Additional file 4: of First-in-human phase 1 study of IT1208, a defucosylated humanized anti-CD4 depleting antibody, in patients with advanced solid tumors
Creators: name: Shitara, Kohei
name: Ueha, Satoshi
name: Shichino, Shigeyuki
name: Aoki, Hiroyasu
name: Haru Ogiwara
name: Nakatsura, Tetsuya
name: Suzuki, Toshihiro
name: Shimomura, Manami
name: Yoshikawa, Toshiaki
name: Shoda, Kayoko
name: Shigehisa Kitano
name: Yamashita, Makiko
name: Nakayama, Takayuki
name: Sato, Akihiro
name: Kuroda, Sakiko
name: Wakabayashi, Masashi
name: Nomura, Shogo
name: Yokochi, Shoji
name: Ito, Satoru
name: Matsushima, Kouji
name: Doi, Toshihiko
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer
subject: Science Policy
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Figure S2. Pharmacokinetics of IT1208 and serum level of cytokines. (DOCX 128 kb)
Shared emotions: a Steinian proposal
Creators: name: Thonhauser, Gerhard
Publisher: name: Freie Universität Berlin
Year: 2018
Subjects: subject: Shared emotions
subject: Collective emotions
subject: Affective intentionality
subject: Communal experience
subject: Edith Stein
subject: 100 Philosophie und Psychologie::150 Psychologie::152 Sinneswahrnehmung, Bewegung, Emotionen, Triebe
subject: 100 Philosophie und Psychologie::150 Psychologie::153 Kognitive Prozesse, Intelligenz

description: The aim of this paper is to clarify the notion of shared emotion. After contextualizing this notion within the broader research landscape on collective affective intentionality, I suggest that we reserve the term shared emotion to an affective experience that is phenomenologically and functionally ours: we experience it together as our emotion, and it is also constitutively not mine and yours, but ours. I focus on the three approaches that have dominated the philosophical discussion on shared emotions: cognitivist accounts, concern-based accounts, and phenomenological fusion accounts. After identifying strengths and weaknesses of these approaches and summarizing the elements that a multifaceted theory of shared emotions requires, I turn to the work of the early phenomenologist Edith Stein to further advance an approach to shared emotions that combines the main strengths of Helm and Salmela’s concern-based accounts and Schmid’s phenomenological fusion account. According to this proposal, the sharedness of a shared emotion cannot be located in one element, but rather consists in a complex of interrelated features.
Finite market size as a source of extreme wealth inequality and market instability
Creators: name: Huang, Zhi-Feng
name: Solomon, Sorin
Publisher: name: arXiv
Year: 2001
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: General Finance (q-fin.GN)
subject: FOS: Physical sciences
subject: FOS: Economics and business

description: We study the finite-size effects in some scaling systems, and show that the finite number of agents N leads to a cut-off in the upper value of the Pareto law for the relative individual wealth. The exponent $α$ of the Pareto law obtained in stochastic multiplicative market models is crucially affected by the fact that N is always finite in real systems. We show that any finite value of N leads to properties which can differ crucially from the naive theoretical results obtained by assuming an infinite N. In particular, finite N may cause in the absence of an appropriate social policy extreme wealth inequality $α< 1$ and market instability.
description: 13 pages, 6 figures, Physica A, in press
Ground state phase diagram of the one-dimensional Bose-Hubbard model from restricted Boltzmann machines
Creators: name: McBrian, Kristopher
name: Carleo, Giuseppe
name: Khatami, Ehsan
Publisher: name: arXiv
Year: 2019
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: Motivated by recent advances in the representation of ground state wavefunctions of quantum many-body systems using restricted Boltzmann machines as variational ansatz, we utilize an open-source platform for constructing such ansatz called NetKet to explore the extent of applicability of restricted Boltzmann machines to bosonic lattice models. Within NetKet, we design and train these machines for the one-dimensional Bose-Hubbard model through a Monte Carlo sampling of the Fock space. We vary parameters such as the strength of the onsite repulsion, the chemical potential, the system size and the maximum site occupancy and use converged equations of state to identify phase boundaries between the Mott insulating and superfluid phases. We compare the average density and the energy to results from exact diagonalization and map out the ground state phase diagram, which agrees qualitatively with previous finding obtained through conventional means.
description: 8 pages, 5 figures, Proceedings of the Conference in Computational Physics 2018
Additional file 3: of First-in-human phase 1 study of IT1208, a defucosylated humanized anti-CD4 depleting antibody, in patients with advanced solid tumors
Creators: name: Shitara, Kohei
name: Ueha, Satoshi
name: Shichino, Shigeyuki
name: Aoki, Hiroyasu
name: Haru Ogiwara
name: Nakatsura, Tetsuya
name: Suzuki, Toshihiro
name: Shimomura, Manami
name: Yoshikawa, Toshiaki
name: Shoda, Kayoko
name: Shigehisa Kitano
name: Yamashita, Makiko
name: Nakayama, Takayuki
name: Sato, Akihiro
name: Kuroda, Sakiko
name: Wakabayashi, Masashi
name: Nomura, Shogo
name: Yokochi, Shoji
name: Ito, Satoru
name: Matsushima, Kouji
name: Doi, Toshihiko
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Table S1. IT1208-related adverse events. (DOCX 13 kb)
Biodiversity assessments: Origin matters
Creators: name: Pauchard, Aníbal
name: Meyerson, Laura A.
name: Bacher, Sven
name: Blackburn, Tim M.
name: Brundu, Giuseppe
name: Cadotte, Marc W.
name: Courchamp, Franck
name: Essl, Franz
name: Genovesi, Piero
name: Haider, Sylvia
name: Holmes, Nick D.
name: Hulme, Philip E.
name: Jeschke, Jonathan M.
name: Lockwood, Julie L.
name: Novoa, Ana
name: Nuñez, Martin A.
name: Peltzer, Duane A.
name: Pyšek, Petr
name: Richardson, David M.
name: Simberloff, Daniel
name: Smith, Kevin
name: Wilgen, Brian W. Van
name: Vilà, Montserrat
name: Wilson, John R. U.
name: Winter, Marten
name: Zenni, Rafael D.
Publisher: name: Freie Universität Berlin
Year: 2018
Subjects: subject: Biodiversity assessment
subject: 500 Naturwissenschaften und Mathematik::570 Biowissenschaften; Biologie::578 Naturgeschichte von Organismen
subject: 300 Sozialwissenschaften::330 Wirtschaft::333 Boden- und Energiewirtschaft

description: Recent global efforts in biodiversity accounting, such as those undertaken through the Convention on Biological Diversity (CBD) and Intergovernmental Science-Policy Platform on Biodiversity and Ecosystem Services (IPBES), are vital if we are to track conservation progress, ensure that we can address the challenges of global change, and develop powerful and scientifically sound indicators. Schlaepfer [1] proposes that we should work toward inventories of biodiversity that account for native and non-native species regardless of species origin and ecological context. We strongly disagree with the approach of combining counts of native and non-native species because this will reduce our capacity to detect the effects of non-native species on native biodiversity with potentially devastating consequences. Compelling and abundant evidence demonstrates that some non-native species can become invasive and produce major ecosystem disruptions and even native species extinction. Unfortunately, we still cannot be certain which non-native species will be the most detrimental (e.g., [2]). Combining native and non-native species together into a single biodiversity index would not only inflate biodiversity estimates and risk promoting the spread of invasive non-native species but would also ignore the fundamental ecological differences between the two groups. The critical differences that should be considered when assessing biodiversity include the following.
Additional file 5: of Gestational weight gain across continents and ethnicity: systematic review and meta-analysis of maternal and infant outcomes in more than one million women
Creators: name: Goldstein, Rebecca
name: Abell, Sally
name: Ranasinha, Sanjeeva
name: Misso, Marie
name: Boyle, Jacqueline
name: Harrison, Cheryce
name: Black, Mary
name: Li, Nan
name: Hu, Gang
name: Corrado, Francesco
name: Hegaard, Hanne
name: Kim, Young
name: Haugen, Margaretha
name: Song, Won
name: Kim, Min
name: Bogaerts, Annick
name: Devlieger, Roland
name: Chung, Judith
name: Teede, Helena
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy

description: Table S2. Body mass index at onset of pregnancy for Asian studies. (DOCX 17 kb)
A Process Algebra for Link Layer Protocols
Creators: name: van Glabbeek, Rob
name: Höfner, Peter
name: Markl, Michael
Publisher: name: arXiv
Year: 2019
Subjects: subject: Networking and Internet Architecture (cs.NI)
subject: Logic in Computer Science (cs.LO)
subject: FOS: Computer and information sciences
subject: F.3.2; F.3.1; C.2.2

description: We propose a process algebra for link layer protocols, featuring a unique mechanism for modelling frame collisions. We also formalise suitable liveness properties for link layer protocols specified in this framework. To show applicability we model and analyse two versions of the Carrier-Sense Multiple Access with Collision Avoidance (CSMA/CA) protocol. Our analysis confirms the hidden station problem for the version without virtual carrier sensing. However, we show that the version with virtual carrier sensing not only overcomes this problem, but also the exposed station problem with probability 1. Yet the protocol cannot guarantee packet delivery, not even with probability 1.
Megalodontes olivieri
Creators: name: Schedl, W.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Megalodontesidae
Megalodontes
Megalodontes olivieri

description: Megalodontes olivieri (BRULLÉ, 1846)
M a t e r i a l:2 Morocco, 20 km E Agdz, 20.4.1995, Mi. Halada lgt., 1 in OÖLM, 1 in coll. et det. W. Schedl 1997/99.
B e m e r k u n g Die Determination erfolgte nach GUSSAKOVSKIJ (1935), nach TAEGER et al. (2010) westpalaearktisch verbreitet, BENSON (1968) erwähnt Mesopotamien. Neu für Marokko!
description: Published as part of Schedl, W., 2014, Ein Beitrag zur Kenntnis der Pflanzenwespenfauna von Marokko (Hymenoptera: Symphyta), pp. 1353-1366 in Linzer biologische Beiträge 46 (2) on page 1354, DOI: 10.5281/zenodo.5310267
title: Real-time simulation of blood perfusion in parameterized lobular structures of the liver
Creators: name: Siddiqui, Ahsan Ali
Publisher: name: UNSPECIFIED
Year: 2025

description: This work focuses on the development of efficient simulation techniques for enabling the acquisition of real-time perfusion profiles within functional units of liver, known as “lobules”, forming the liver parenchyma. To motivate the work, liver anatomy is briefly reviewed, along with few pathological conditions, and their associated influences on the perfusion characteristics of the parenchyma. An existing mathematical modeling framework for the blood perfusion within the lobular domains is presented, and the parametric aspects of the associated physiology is incorporated as the model parameters. Specifically, the parameterization of lobular domains, parenchyma’s permeability, blood viscosity, and flow driving forces are taken into consideration. The resulting parameterized model demands efficient computational methods. Thus, the parameterized formulation is efficiently presented to facilitate the construction of reduced-order models, which enable faster computations and acquisition of perfusion profiles in real-time.

For the construction of reduced-order models. various techniques are reviewed, and put into practice for addressing different aspects of the parameterized problem. These techniques are implemented in combinations, leading to the constructions of unique hybrid reduced-order models. In particular, a hybrid reduced-order model for the parameterized lobular domains is devised based on the combination of Proper Orthogonal Decomposition and Discrete Empirical Interpolation Method. This model accurately mimics the velocity fields within varying lobular domains and is an order of magnitude faster than the high-fidelity model. Moreover, novel hybrid reduced-order representations based on Proper Generalized Decomposition are constructed as the next step, where the variations in parenchyma’s permeability, blood viscosity, and driving forces are also taken into consideration. These novel representations bypass the intermediate steps of the reduced-order model developed initially, and therefore, offer even higher speedups.

Lastly, the novel hybrid reduced-order representations are extended for tessellated lobular structures, where interconnections among them are enabled through appropriate couplings based on certain assumptions. A unique lobular patch is considered for the purpose of demonstration, where three different health conditions of the patch are taken into account. The novel representations for these tessellated lobular patches are designed in the next step, where multivariate representations of the parametric functions are leveraged to efficiently deal with the high dimensional nature of the problem. The performance of these representations are assessed based on computational speedups and imitation of clinical observations. The results demonstrate speedups of at least three orders of magnitudes, where the novel representations are capable of mimicking clinical observations when subjected to pathological stimuli.
Arge pyrenaica subsp. pyrenaica pyrenaica (ANDRE 1879
Creators: name: Schedl, W.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Argidae
Arge
Arge pyrenaica
Arge pyrenaica pyrenaica (andré, 1879)

description: Arge pyrenaica pyrenaica (ANDRÉ, 1879)
M a t e r i a l:1 1 Marokko, Marakech, Ouirgane, 1000 m, 26. u. 27.4.1994, 2 Marakech, Ait Lekak, 2000 m, 17. u. 18.6.1994, 1 Marakech, Oukaimeden, 2500 m, 17.6.1994, alle leg. C. Kassebeer, in coll. et det. W. Schedl 2014.
B e m e r k u n g:alpineArt,verbreitetinS-Europa,Anatolien,Kaukasus,Transkaukasus, Nordural, Mittelasien bis Sibirien, Mongolei und Nordafrika (MUCHE 1977), 1 e.l. von Marokko in LACOURT (1986b) genannt, siehe auch FORSIUS (1930).
description: Published as part of Schedl, W., 2014, Ein Beitrag zur Kenntnis der Pflanzenwespenfauna von Marokko (Hymenoptera: Symphyta), pp. 1353-1366 in Linzer biologische Beiträge 46 (2) on page 1354, DOI: 10.5281/zenodo.5310267
Evidence of charge density wave with anisotropic gap in monolayer VTe$_2$ film
Creators: name: Wang, Yuan
name: Ren, Junhai
name: Li, Jiaheng
name: Wang, Yujia
name: Peng, Huining
name: Yu, Pu
name: Duan, Wenhui
name: Zhou, Shuyun
Publisher: name: arXiv
Year: 2019
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We report experimental evidence of charge density wave (CDW) transition in monolayer 1T-VTe$_2$ film. 4$\times$4 reconstruction peaks are observed by low energy electron diffraction below the transition temperature $T_{CDW}$ = 186 K. Angle-resolved photoemission spectroscopy measurements reveal arc-like pockets with anisotropic CDW gaps up to 50 meV. The anisotropic CDW gap is attributed to the imperfect nesting of the CDW wave vector, and first-principles calculations reveal phonon softening at the same vector, suggesting the important roles of Fermi surface nesting and electron-phonon interaction in the CDW mechanism.
Enhanced magnetocaloric effect in frustrated magnets
Creators: name: Zhitomirsky, M. E.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: The magnetothermodynamics of strongly frustrated classical Heisenberg antiferromagnets on kagome, garnet, and pyrochlore lattices is examined. The field induced adiabatic temperature change (dT/dH)_S is significantly larger for such systems compared to ordinary non-frustrated magnets and also exceeds the cooling rate of an ideal paramagnet in a wide range of fields. An enhancement of the magnetocaloric effect is related to presence of a macroscopic number of soft modes in frustrated magnets below the saturation field. Theoretical predictions are confirmed with extensive Monte Carlo simulations.
description: 7 pages
Ultra-efficient Cooling in Ferromagnet-Superconductor Microrefrigerators
Creators: name: Giazotto, F.
name: Taddei, F.
name: Fazio, R.
name: Beltram, F.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: A promising scheme for electron microrefrigeration based on ferromagnet-superconductor contacts is presented. In this setup, cooling power densities up to 600 nW/$μ$m$^2$ can be achieved leading to electronic temperature reductions largely exceeding those obtained with existing superconductor-normal metal tunnel contacts. Half-metallic CrO$_2$/Al bilayers are indicated as ideal candidates for the implementation of the device.
description: 9 pages, 3 figures, submitted to Applied Physics Letters
title: Neo-extractivist controversies in Bolivia
title: indigenous perspectives on global norms
titleType: Subtitle
Creators: name: Eichler, Jessika
Publisher: name: Freie Universität Berlin
Year: 2019
Subjects: subject: human rights
subject: indigenous perspectives
subject: participatory rights
subject: decision-making mechanisms
subject: natural resources
subject: Bolivia
subject: 300 Sozialwissenschaften::340 Recht::340 Recht

description: Ever since Evo Morales Ayma became Bolivia's first indigenous president in 2006 and the promulgation of a human-rights-enhancing Constitution (2009) thereafter, indigenous peoples’ rights were gradually recognised. Yet, with the increasing demand for natural resources, indigenous communities have been adversely affected by the state's neo-extractivist policies. While global indigenous rights norms protect their fundamental rights, legal-implementation processes in the country's lowlands reveal dilemmas in terms of the value of laws in practice as well as its reinterpretation on the ground. Namely, in the communities, different positions and camps have emerged in terms of the role and functions of participatory rights. Despite the potential of the latter in strengthening collective-rights regimes and self-determination, community leaders, advisers and other members report how such processes fracture and weaken decision-making mechanisms and human rights claims.
Design, synthesis and evaluation of lactoside-derived galectin-3 inhibitors
Creators: name: He, Peng
name: Zhao, Chuanfang
name: Sun, Xue
name: Du, Yuguo
Publisher: name: Taylor & Francis
Year: 2019
Subjects: Biophysics
Biochemistry
Medicine
Molecular Biology
Pharmacology
Chemical Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Virology

description: Based on docking computation, a panel of lactoside derivatives have been designed as galectin-3 inhibitors. Suitable functional group modifications at C′-3 of methyl lactoside were predicted to supply some additional π–cation, π…H–O, and hydrogen bond interactions between the designed substrates and galectin-3 residues. The selected compounds, giving higher TotalScore in docking calculations, were thus synthesized, and their binding affinities toward galectin-3 were evaluated with SPR assay.
DNA packaging in viral capsids with peptide arms
Creators: name: Cao, Qianqian
name: Bachmann, Michael
Publisher: name: Freie Universität Berlin
Year: 2016
Subjects: subject: DNA packaging
subject: viral capsids
subject: peptide arms
subject: 500 Naturwissenschaften und Mathematik::530 Physik::530 Physik
subject: 500 Naturwissenschaften und Mathematik::540 Chemie::540 Chemie und zugeordnete Wissenschaften

description: Strong chain rigidity and electrostatic self-repulsion of packed double-stranded DNA in viruses require a molecular motor to pull the DNA into the capsid. However, what is the role of electrostatic interactions between different charged components in the packaging process? Though various theories and computer simulation models were developed for the understanding of viral assembly and packaging dynamics of the genome, long-range electrostatic interactions and capsid structure have typically been neglected or oversimplified. By means of molecular dynamics simulations, we explore the effects of electrostatic interactions on the packaging dynamics of DNA based on a coarse-grained DNA and capsid model by explicitly including peptide arms (PAs), linked to the inner surface of the capsid, and counterions. Our results indicate that the electrostatic interactions between PAs, DNA, and counterions have a significant influence on the packaging dynamics. We also find that the packed DNA conformations are largely affected by the structure of the PA layer, but the packaging rate is insensitive to the layer structure.
Reduction of Josephson critical current in short ballistic SNS weak links
Creators: name: Nikolic, Branislav K.
name: Freericks, J. K.
name: Miller, P.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: We present fully self-consistent calculations of the thermodynamic properties of three-dimensional clean SNS Josephson junctions, where S is an s-wave short-coherence-length superconductor and N is a clean normal metal. The junction is modeled on an infinite cubic lattice such that the transverse width of the S is the same as that of the N, and its thickness is tuned from the short to long limit. Both the reduced order parameter near the SN boundary and the short coherence length depress the critical Josephson current $I_c$, even in short junctions. This is contrasted with recent measurements on SNS junctions finding much smaller $I_cR_N$ products than expected from the standard (non-self consistent and quasiclassical) predictions. We also find unusual current-phase relations, a ``phase anti-dipole'' spatial distribution of the self-consistently determined contribution to the macroscopic phase, and an ``unexpected'' minigap in the local density of states within the N region.
description: 5 pages, 4 embedded EPS figures
Additional file 6: of Glucocorticoid receptor modulation decreases ER-positive breast cancer cell proliferation and suppresses wild-type and mutant ER chromatin association
Creators: name: Tonsing-Carter, Eva
name: Hernandez, Kyle
name: Kim, Caroline
name: Harkless, Ryan
name: Oh, Alyce
name: Bowie, Kathleen
name: West-Szymanski, Diana
name: Betancourt-Ponce, Mayra
name: Green, Bradley
name: Lastra, Ricardo
name: Gini Fleming
name: Sarat Chandarlapaty
name: Conzen, Suzanne
Publisher: name: figshare
Year: 2019
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Cancer
subject: Plant Biology

description: Figure S4. Mutant Y573S ER and E2 stimulated wild-type ER bind to the same enhancer regions of pro-proliferative genes. MCF-7 cells expressing wild-type ER or mutant Y537S ER demonstrates overlapping chromatin enrichment by ChIP sequencing [39] at CCND1, CDK2 and CDK6 enhancer regions following vehicle (ETOH), 100â nM Dex, 100â nM E2, or Dex/E2 (DE) at 60â min. (PDF 142 kb)
Psittacus amazoninus Des Murs 1845
Creators: name: Voisin, Claire
name: Voisin, Jean-François
Publisher: name: Zenodo
Year: 2008
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Aves
Psittaciformes
Psittacidae
Psittacus
Psittacus amazoninus

description: Psittacus amazoninus Des Murs, 1845
 Psittacus amazoninus Des Murs, 1845: 207.
 IDENTITÉ. — Hapalopsittaca amazonina (Des Murs, 1845).
SPÉCIMEN TYPE. — Holotype par monotypie: C.G. 2004-88 (A.C. 1268; N.C. 143). —Inscriptions sous le socle: Colombie / Bogota / acq. à M. Delaroque / 1843 / 1268 / Caïca amazonica / Des Murs / Type. — Étiquette du socle: Caica amazonica / (Des M.) / Type.
LOCALITÉ TYPE. — Santa-Fé-de-Bogota, Colombie.
REMARQUES Après une description en latin, Des Murs (1845) indique que le spécimen qu’il a décrit vient de Santa-Fé-de-Bogota.
description: Published as part of Voisin, Claire & Voisin, Jean-François, 2008, Liste des types d'oiseaux des collections du Muséum national d'Histoire naturelle de Paris. 16: Perroquets (Psittacidae), pp. 463-499 in Zoosystema 30 (2) on page 478, DOI: 10.5281/zenodo.5402150
Intrinsic Jump Character of the First-Order Quantum Phase Transitions
Creators: name: Luo, Qiang
name: Zhao, Jize
name: Wang, Xiaoqun
Publisher: name: arXiv
Year: 2019
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We find that the first-order quantum phase transitions~(QPTs) are characterized by intrinsic jumps of relevant operators while the continuous ones are not. Based on such an observation, we propose a bond reversal method where a quantity $\mathcal{D}$, the difference of bond strength~(DBS), is introduced to judge whether a QPT is of first order or not. This method is firstly applied to an exactly solvable spin-$1/2$ \textit{XXZ} Heisenberg chain and a quantum Ising chain with longitudinal field where distinct jumps of $\mathcal{D}$ appear at the first-order transition points for both cases. We then use it to study the topological QPT of a cross-coupled~($J_{\times}$) spin ladder where the Haldane--rung-singlet transition switches from being continuous to exhibiting a first-order character at $J_{\times, I} \simeq$ 0.30(2). Finally, we study a recently proposed one-dimensional analogy of deconfined quantum critical point connecting two ordered phases in a spin-$1/2$ chain. We rule out the possibility of weakly first-order QPT because the DBS is smooth when crossing the transition point. Moreover, we affirm that such transition belongs to the Gaussian universality class with the central charge $c$ = 1.
description: 6+epsilon + 4 pages, 6 + 9 figures
Maximizing Entropy by Minimizing Area: Towards a New Principle of Self-Organization
Creators: name: Ziherl, P.
name: Kamien, Randall D.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We propose a heuristic explanation for the numerous non-close-packed crystal structures observed in various colloidal systems. By developing an analogy between soap froths and the soft coronas of fuzzy colloids, we provide a geometrical interpretation of the free energy of soft spheres. Within this picture, we show that the close-packing rule associated with hard-core interaction and positional entropy of particles is frustrated by a minimum-area principle associated with the soft tail and internal entropy of the soft coronas. We also discuss these ideas in terms of crystal architecture and pair distribution functions and analyze the phase diagram of a model hard-sphere--square-shoulder system within the cellular theory. We find that the A15 lattice, known to be area minimizing, is favored for a reasonable range of model parameters and so it is among the possible equilibrium states for a variety of colloidal systems. We also show that in the case of short-range convex potentials the A15 and other non-close-packed lattices coexist over a broad ranges of densities, which could make their identification difficult.
description: 15 pages RevTeX, 12 included figures
Abia gribodoi KONOW 1895
Creators: name: Schedl, W.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Cimbicidae
Abia
Abia gribodoi

description: Abia gribodoi KONOW, 1895 (), 1898 ()
M a t e r i a l:1 Marokko, Marrakech, Ourigane, 1000 m, 26.3.1995, 1 Marokko, Meknes, Ifran Park, 1650 m, 29.3.1995, beide leg. C. Kassebeer, in coll. et det. W. Schedl 2014.
 B e m e r k u n g:DieseArtgehörtzum Abia mutica -Komplex, die Stigmata sind ganz dunkelbraun, die männlichen Sternite rotbraun, Imagines als Zaraea gribodoi nach LACOURT (1986a p. 157) an Lonicera etrusca bzw. Symphoricarpus racemosus gefangen (ohne Fundortangabe) aber von Algerien und Marokko genannt (LACOURT 1986a).
 Abb. 1: Karte von Marokko in Anlehnung an Karten in LACOURT (1991a).
description: Published as part of Schedl, W., 2014, Ein Beitrag zur Kenntnis der Pflanzenwespenfauna von Marokko (Hymenoptera: Symphyta), pp. 1353-1366 in Linzer biologische Beiträge 46 (2) on pages 1354-1355, DOI: 10.5281/zenodo.5310267
Pionus melanotis Lafresnaye 1847
Creators: name: Voisin, Claire
name: Voisin, Jean-François
Publisher: name: Zenodo
Year: 2008
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Aves
Psittaciformes
Psittacidae
Pionus
Pionus melanotis

description: Pionus melanotis Lafresnaye, 1847
 Pionus melanotis Lafresnaye, 1847 (mars): 67.
 IDENTITÉ. — Hapalopsittaca melanotis (Lafresnaye, 1847).
SPÉCIMENS TYPES. — Syntypes: C.G. 2004-273 (A.C. 1227; N.C. 137). — Inscriptions sous le socle: Bolivie / Yungas / M. d’Orbigny / 1834 nº 425 / nº 39 / 1227 / Caïca melanotis / Lafr. — Étiquette du socle: Caïca melanotis / (Lafr.) / d’Orbigny Bolivie.
C.G. 2004-269 (A.C. 1228; N.C. 138). — Inscriptions sous le socle: Bolivie / Yungas / 1834 / d’Orbigny / 1228 / Caïca melanotis / Lafr. Type de Des Murs. — Étiquette du socle: Caïca melanotis / (Lafr.) / d’Orbigny Bolivie.
LOCALITÉ TYPE. — Bolivie.
REMARQUES
Lafresnaye (1847) précise bien: «Cette espèce a été rapportée de Bolivie au Musée de Paris il y a déjà plusieurs années par M. A. d’Orbigny.» La mention « type » n’a pas été notée sous les socles et sur les étiquettes, mais il s’agit d’un oubli, car d’après le texte de Lafresnaye ces deux spécimens sont bien ceux qu’il a décrits.
 Le spécimen C.G. 2004-269 est très probablement celui représenté sur la planche 60 de l’ouvrage de Des Murs (1849). Ce dernier a gardé le nom de Pionus melanotis qu’il attribue à Lafresnaye et mentionne avoir repris la description de Lafresnaye. Publiés dans la dixième livraison, en septembre 1847, le texte et la planche de Des Murs sont parus après la description de Lafresnaye parue en mars.
description: Published as part of Voisin, Claire & Voisin, Jean-François, 2008, Liste des types d'oiseaux des collections du Muséum national d'Histoire naturelle de Paris. 16: Perroquets (Psittacidae), pp. 463-499 in Zoosystema 30 (2) on pages 478-479, DOI: 10.5281/zenodo.5402150
Supporting Information: Details of the Mathematical Model from Mathematical modelling of breast cancer cells in response to endocrine therapy and Cdk4/6 inhibition
Creators: name: He, Wei
name: Demas, Diane M.
name: Conde, Isabel P.
name: Shajahan-Haq, Ayesha N.
name: Baumann, William T.
Publisher: name: The Royal Society
Year: 2020

description: Estrogen receptor (ER) positive breast cancer is responsive to a number of targeted therapies used clinically. Unfortunately, the continuous application of any targeted therapy often results in resistance to the therapy. Our ultimate goal is to use mathematical modelling to optimize alternating therapies that not only decrease proliferation but also stave off resistance. Toward this end, we measured levels of key proteins and proliferation over a 7-day time course in ER+ MCF-7 breast cancer cells. Treatments included endocrine therapy, either estrogen deprivation, which mimics the effects of an aromatase inhibitor, or fulvestrant, an ER degrader. These data were used to calibrate a mathematical model based on key interactions between ER signalling and the cell cycle. We show that the calibrated model is capable of predicting the combination treatment of fulvestrant and estrogen deprivation. Further, we show that we can add a new drug, palbociclib, to the model by measuring only two key proteins, cMyc and hyperphosphorylated RB1, and adjusting only parameters associated with the drug. The model is then able to predict the combination treatment of estrogen deprivation and palbociclib. We illustrate the model's potential to explore protocols that limit proliferation and hold off resistance by not depending on any one therapy.
Additional file 5: of Glucocorticoid receptor modulation decreases ER-positive breast cancer cell proliferation and suppresses wild-type and mutant ER chromatin association
Creators: name: Tonsing-Carter, Eva
name: Hernandez, Kyle
name: Kim, Caroline
name: Harkless, Ryan
name: Oh, Alyce
name: Bowie, Kathleen
name: West-Szymanski, Diana
name: Betancourt-Ponce, Mayra
name: Green, Bradley
name: Lastra, Ricardo
name: Gini Fleming
name: Sarat Chandarlapaty
name: Conzen, Suzanne
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Plant Biology
subject: 60506 Virology

description: Figure S3. GR liganding inhibits MCF-7 mutant ER-driven proliferation and decreases proliferative gene expression. A) Doxycycline induced expression of HA-tagged ER, and GR expression remains stable in all cell lines. B) MCF-7 HA-WT, HA-Y537S, and HA-D538G cells were treated with vehicle (ETOH) and proliferation as evaluated at 6 days of treatment. HA-D538G and HA-Y537S expressing MCF-7 cells show 30–50% increase in cell proliferation, respectively, compared to HA-WT MCF-7 cells. C) Dex, C134 and C335 all significantly inhibited E2-mediated proliferation in both HA-wild type (HA-WT) and HA-D538G MCF-7 cells following 6 days of treatment (*p
Synchronization and Coarsening (without SOC) in a Forest-Fire Model
Creators: name: Chan, K. E.
name: Krapivsky, P. L.
name: Redner, S.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We study the long-time dynamics of a forest-fire model with deterministic tree growth and instantaneous burning of entire forests by stochastic lightning strikes. Asymptotically the system organizes into a coarsening self-similar mosaic of synchronized patches within which trees regrow and burn simultaneously. We show that the average patch length grows linearly with time as t-->oo. The number density of patches of length L, N(L,t), scales as ^{-2}M(L/), and within a mean-field rate equation description we find that this scaling function decays as e^{-1/x} for x-->0, and as e^{-x} for x-->oo. In one dimension, we develop an event-driven cluster algorithm to study the asymptotic behavior of large systems. Our numerical results are consistent with mean-field predictions for patch coarsening.
description: 5 pages, 4 figures, 2-column revtex format. To be submitted to PRE
Additional file 1: of Metabolomics approach to serum biomarker for laxative effects of red Liriope platyphylla in loperamide-induced constipation of SD rats
Creators: name: Kim, Ji
name: Lee, Young
name: Ryu, Sung
name: Park, Ji
name: Kang, Mi
name: Choi, Hyeon
name: Bae, Su
name: Yusang Choi
name: Kang, Hyun
name: Kyu-Bong Kim
name: Suhkmann Kim
name: Lim, Yong
name: Hwang, Dae
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: 60506 Virology

description: Table S1. Concentration of 33 metabolites in serum (DOCX 19 kb)
Phonon and electron transport in Janus monolayers based on InSe
Creators: name: Wan, Wenhui
name: Zhao, Shan
name: Ge, Yanfeng
name: Liu, Yong
Publisher: name: arXiv
Year: 2019
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: We systematically investigated the phonon and electron transport properties of monolayer InSe and its Janus derivatives including monolayer In2SSe and In2SeTe by first-principles calculations. The breaking of mirror symmetry produce a distinguishable A1 peak in the Raman spectra of monolayer In2SSe and In2SeTe. The room-temperature thermal conductivity (\k{appa}) of monolayer InSe, In2SSe and In2SeTe is 44.6, 46.9, and 29.9 W/(m K), respectively. There is a competition effect between atomic mass, phonon group velocity and phonon lifetime. The \k{appa} can be further effectively modulated by sample size for the purpose of thermoelectric applications. Meanwhile, monolayer In2SeTe exhibits a direct band and higher electron mobility than that of monolayer InSe, due to the smaller electron effective mass caused by tensile strain on the Se side. These results indicate that 2D Janus group-III chalcogenides can provide a platform to design the new electronic, optoelectronic and thermoelectric devices.
description: 7 pages, 5 figures