cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Thermal Emission Spectroscopy for Single Nanoparticle Temperature Measurement: Optical System Design and Calibration
Creators: name: Long, Bryan A.
name: Rodriguez, Daniel J.
name: Lau, Chris Y.
name: Anderson, Scott L.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Instrumentation and Detectors (physics.ins-det)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: We discuss the design of an optical system that allows measurement of 600 nm to 1650 nm emission spectra for individual nanoparticles (NPs), laser heated in an electrodynamic trap in controlled atmospheres. An approach to calibration of absolute intensity vs. wavelength for very low emission intensities is discussed, and examples of NP graphite and carbon black spectra are used to illustrate the methodology.
description: 5 figures, with data tables for each apprended
Lonchaea nitidissima Kovalev 1978
Creators: name: Bächli, Gerhard
name: Merz, Bernhard
name: Haenni, Jean-Paul
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy

description: Lonchaea nitidissima Kovalev, 1978. (MacGowan et al. 2007).
description: Published as part of Bächli, Gerhard, Merz, Bernhard & Haenni, Jean-Paul, 2014, Dritter Nachtrag zur Checkliste der Diptera der Schweiz, pp. 119-140 in Entomo Helvetica 7 on page 127, DOI: 10.5169/seals-985967, http://zenodo.org/record/8096745
Additional file 8 of Antibody conversion rates to SARS-CoV-2 in saliva from children attending summer schools in Barcelona, Spain
Creators: name: Dobaño, Carlota
name: Alonso, Selena
name: Fernández de Sevilla, Mariona
name: Vidal, Marta
name: Jiménez, Alfons
name: Pons Tomas, Gemma
name: Jairoce, Chenjerai
name: Melé Casas, María
name: Rubio, Rocío
name: Hernández García, María
name: Ruiz-Olalla, Gemma
name: Girona-Alarcón, Mònica
name: Barrios, Diana
name: Santano, Rebeca
name: Mitchell, Robert A.
name: Puyol, Laura
name: Mayer, Leonie
name: Chi, Jordi
name: Rodrigo Melero, Natalia
name: Carolis, Carlo
name: Garcia-Miquel, Aleix
name: Bonet-Carne, Elisenda
name: Claverol, Joana
name: Cubells, Marta
name: Fortuny, Claudia
name: Fumadó, Victoria
name: Jou, Cristina
name: Muñoz-Almagro, Carmen
name: Izquierdo, Luis
name: Bassat, Quique
name: Gratacós, Eduard
name: Aguilar, Ruth
name: García-García, Juan José
name: Moncunill, Gemma
name: Jordan, Iolanda
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Additional file 8: Figure S5. Antibody levels by age and RT-PCR results
Critical slowing down and entanglement protection
Creators: name: Fiorelli, Eliana
name: Cuccoli, Alessandro
name: Verrucchi, Paola
Publisher: name: arXiv
Year: 2019
Subjects: subject: Quantum Physics (quant-ph)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We consider a quantum device $D$ interacting with a quantum many-body environment $R$ which features a second-order phase transition at $T=0$. Exploiting the description of the critical slowing down undergone by $R$ according to the Kibble-Zurek mechanism, we explore the possibility to freeze the environment in a configuration such that its impact on the device is significantly reduced. Within this framework, we focus upon the magnetic-domain formation typical of the critical behaviour in spin models, and propose a strategy that allows one to protect the entanglement between different components of $D$ from the detrimental effects of the environment.
description: 12 pages, 7 figures
Quantum dynamics in canonical and micro-canonical ensembles. Part II. Tunneling in double well potential
Creators: name: Filinov, V.
name: Lozovik, Yu.
name: Filinov, A.
name: Zacharov, I.
name: Oparin, A.
Publisher: name: arXiv
Year: 1998
Subjects: subject: Quantum Physics (quant-ph)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: In the second part of this paper in micro canonical ensemble the new numerical approach for consideration of quantum dynamics and calculations of the average values of quantum operators and time correlation functions in the Wigner representation of quantum statistical mechanics has been developed. The numerical results have been obtained for series of the average values of quantum operators as well as for the time correlation function characterizing the energy level structure, the momentum flow of tunneling particles at barrier crossing and the absorption spectra of electron in potential well. The developed quantum dynamics method was tested by comparison of numerical results with analytical estimations. Tunneling transitions and the effect of the quasi stationary state has been considered as the reason of the peculiarities in behaviour of the time correlation functions and position and momentum dispersions. Possibility of applying the developed approach to the theory of classical wave propagation in random media have been also considered. For classical waves some results have been obtained for Gaussian beam propagation in 2D and 3D waveguides.
description: 7 pages, 8 figures
GIN-tonic: Collaboration in researchmade easy / Using GIN-Tonic to structure and write research Papers Data
Creators: name: Colomb, Julien
Publisher: name: Zenodo
Year: 2021
Subjects: data management
github for science

description: presentation to the neuromatch conference 2020, and Thüringer FDM-Tage 2021
 see slide one for list of contributors to the project.
Additional file 2: of Paeniclostridium sordellii and Clostridioides difficile encode similar and clinically relevant tetracycline resistance loci in diverse genomic locations
Creators: name: Vidor, Callum
name: Bulach, Dieter
name: Awad, Milena
name: Lyras, Dena
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Table S2. Bacterial isolates, genomic DNA sequences and sequencing data used in this study. (PDF 274 kb)
Effect of order-parameter fluctuations on the Halperin-Lubensky-Ma first-order transition in superconductors and liquid crystals
Creators: name: Herbut, Igor F.
name: Yethiraj, Anand
name: Bechhoefer, John
Publisher: name: arXiv
Year: 2000
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: We show that order-parameter fluctuations in a good type-I superconductor or a liquid crystal always increase the size of the first-order transition. This behavior is eventually changed when the system crosses over to inverted-XY critical behavior, with the size of the first-order transition vanishing as a power law with a crossover exponent. We find a good agreement between our theory and a recent experiment on the nematic-smectic-A first-order transition in 8CB-10CB mixtures of liquid crystals.
description: 4 pages, RevTex, 2 postscript figures included
R$^2$-CNN: Fast Tiny Object Detection in Large-Scale Remote Sensing Images
Creators: name: Pang, Jiangmiao
name: Li, Cong
name: Shi, Jianping
name: Xu, Zhihai
name: Feng, Huajun
Publisher: name: arXiv
Year: 2019
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: Recently, the convolutional neural network has brought impressive improvements for object detection. However, detecting tiny objects in large-scale remote sensing images still remains challenging. First, the extreme large input size makes the existing object detection solutions too slow for practical use. Second, the massive and complex backgrounds cause serious false alarms. Moreover, the ultratiny objects increase the difficulty of accurate detection. To tackle these problems, we propose a unified and self-reinforced network called remote sensing region-based convolutional neural network ($\mathcal{R}^2$-CNN), composing of backbone Tiny-Net, intermediate global attention block, and final classifier and detector. Tiny-Net is a lightweight residual structure, which enables fast and powerful features extraction from inputs. Global attention block is built upon Tiny-Net to inhibit false positives. Classifier is then used to predict the existence of targets in each patch, and detector is followed to locate them accurately if available. The classifier and detector are mutually reinforced with end-to-end training, which further speed up the process and avoid false alarms. Effectiveness of $\mathcal{R}^2$-CNN is validated on hundreds of GF-1 images and GF-2 images that are 18 000 $\times$ 18 192 pixels, 2.0-m resolution, and 27 620 $\times$ 29 200 pixels, 0.8-m resolution, respectively. Specifically, we can process a GF-1 image in 29.4 s on Titian X just with single thread. According to our knowledge, no previous solution can detect the tiny object on such huge remote sensing images gracefully. We believe that it is a significant step toward practical real-time remote sensing systems.
description: 13 pages. Accepted to IEEE Transactions on Geoscience and Remote Sensing
Additional file 1: of Using floating catchment area (FCA) metrics to predict health care utilization patterns
Creators: name: Delamater, Paul
name: Shortridge, Ashton
name: Kilcoyne, Rachel
Publisher: name: figshare
Year: 2019
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Distance decay parameter generation methods and examples. (DOCX 410 kb)
Odinia ornata
Creators: name: Bächli, Gerhard
name: Merz, Bernhard
name: Haenni, Jean-Paul
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy

description: Odinia ornata (Zetterstedt, 1838). (Tschirnhaus 2008).
description: Published as part of Bächli, Gerhard, Merz, Bernhard & Haenni, Jean-Paul, 2014, Dritter Nachtrag zur Checkliste der Diptera der Schweiz, pp. 119-140 in Entomo Helvetica 7 on page 127, DOI: 10.5169/seals-985967, http://zenodo.org/record/8096745
Population clustering as a signal for deconfinement in accreting compact stars
Creators: name: Poghosyan, G.
name: Grigorian, H.
name: Blaschke, D.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We study the evolution of the rotation frequency for accreting compact stars. The discontinuous change of the moment of inertia of a rapidly rotating star due to the possible quark core appearance entails a characteristic change in the spin evolution. Numerical solutions have been performed using a model equation of state describing the deconfinement phase transition. Trajectories of spin evolution are discussed in the angular velocity - baryon number plane (phase diagram) for different accretion scenarios defined by the initial values of mass and magnetic field of the star, as well as mass accretion rate and magnetic field decay time. We observe a characteristic increase in the waiting time when a configuration enters the quark core regime. Overclustering of the population of Z sources of LMXBs in the phase diagram is suggested as a direct measurement of the critical line for the deconfinement phase transition since it is related to the behaviour of the moment of inertia of the compact star.
description: 6 pages, 4 figures, uses aastex.cls (included), text and figures revised, references updated
Additional file 7 of Antibody conversion rates to SARS-CoV-2 in saliva from children attending summer schools in Barcelona, Spain
Creators: name: Dobaño, Carlota
name: Alonso, Selena
name: Fernández de Sevilla, Mariona
name: Vidal, Marta
name: Jiménez, Alfons
name: Pons Tomas, Gemma
name: Jairoce, Chenjerai
name: Melé Casas, María
name: Rubio, Rocío
name: Hernández García, María
name: Ruiz-Olalla, Gemma
name: Girona-Alarcón, Mònica
name: Barrios, Diana
name: Santano, Rebeca
name: Mitchell, Robert A.
name: Puyol, Laura
name: Mayer, Leonie
name: Chi, Jordi
name: Rodrigo Melero, Natalia
name: Carolis, Carlo
name: Garcia-Miquel, Aleix
name: Bonet-Carne, Elisenda
name: Claverol, Joana
name: Cubells, Marta
name: Fortuny, Claudia
name: Fumadó, Victoria
name: Jou, Cristina
name: Muñoz-Almagro, Carmen
name: Izquierdo, Luis
name: Bassat, Quique
name: Gratacós, Eduard
name: Aguilar, Ruth
name: García-García, Juan José
name: Moncunill, Gemma
name: Jordan, Iolanda
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Additional file 7: Figure S4. Antibody levels by age
Hydrodynamically-bound states of a pair of microrollers: a dynamical system insight
Creators: name: Delmotte, Blaise
Publisher: name: arXiv
Year: 2018
Subjects: subject: Fluid Dynamics (physics.flu-dyn)
subject: Soft Condensed Matter (cond-mat.soft)
subject: Pattern Formation and Solitons (nlin.PS)
subject: FOS: Physical sciences

description: Recent work has identified persistent cluster states which were shown to be assembled and held together by hydrodynamic interactions alone [Driscoll \textit{et al.} (2017) Nature Physics, 13(4), 375]. These states were seen in systems of colloidal microrollers; microrollers are colloidal particles which rotate about an axis parallel to the floor and generate strong, slowly decaying, advective flows. To understand these bound states, we study a simple, yet rich, model system of two microrollers. Here we show that pairs of microrollers can exhibit hydrodynamic bound states whose nature depends on a dimensionless number, denoted $B$, that compares the relative strength of gravitational forces and external torques. Using a dynamical system framework, we characterize these various states in phase space and analyze the bifurcations of the system as $B$ varies. In particular, we show that there is a critical value, $B^*$, above which active flows can beat gravity and lead to stable motile orbiting, or "leapfrog", trajectories, reminiscent of the self-assembled motile structures, called "critters", observed by Driscoll \textit{et al}. We identify the conditions for the emergence of these trajectories and study their basin of attraction. This work shows that a wide variety of stable bound states can be obtained with only two particles. Our results aid in understanding the mechanisms that lead to spontaneous self-assembly in hydrodynamic systems, such as microroller suspensions, as well as how to optimize these systems for particle transport.
Quantum nucleation in ferromagnets with tetragonal and hexagonal symmetries
Creators: name: Zhou, Yi
name: Lu, Rong
name: Zhu, Jia-Lin
name: Chang, Lee
Publisher: name: arXiv
Year: 2000
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: The phenomenon of quantum nucleation is studied in a ferromagnet in the presence of a magnetic field at an arbitrary angle. We consider the magnetocrystalline anisotropy with tetragonal symmetry and that with hexagonal symmetry, respectively. By applying the instanton method in the spin-coherent-state path-integral representation, we calculate the dependence of the rate of quantum nucleation and the crossover temperature on the orientation and strength of the field for a thin film and for a bulk solid. Our results show that the rate of quantum nucleation and the crossover temperature depend on the orientation of the external magnetic field distinctly, which provides a possible experimental test for quantum nucleation in nanometer-scale ferromagnets.
description: 19 pages and 3 figures, Final version and accepted by Phys. Rev. B (Feb. B1 2001)
Black Hole Microstate Cosmology
Creators: name: Cooper, Sean
name: Rozali, Moshe
name: Swingle, Brian
name: Van Raamsdonk, Mark
name: Waddell, Christopher
name: Wakeham, David
Publisher: name: arXiv
Year: 2018
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: In this note, we explore the possibility that certain high-energy holographic CFT states correspond to black hole microstates with a geometrical behind-the-horizon region, modelled by a portion of a second asymptotic region terminating at an end-of-the-world (ETW) brane. We study the time-dependent physics of this behind-the-horizon region, whose ETW boundary geometry takes the form of a closed FRW spacetime. We show that in many cases, this behind-the-horizon physics can be probed directly by looking at the time dependence of entanglement entropy for sufficiently large spatial CFT subsystems. We study in particular states defined via Euclidean evolution from conformal boundary states and give specific predictions for the behavior of the entanglement entropy in this case. We perform analogous calculations for the SYK model and find qualitative agreement with our expectations. A fascinating possibility is that for certain states, we might have gravity localized to the ETW brane as in the Randall-Sundrum II scenario for cosmology. In this case, the effective description of physics beyond the horizon could be a big bang/big crunch cosmology of the same dimensionality as the CFT. In this case, the d-dimensional CFT describing the black hole microstate would give a precise, microscopic description of the d-dimensional cosmological physics.
description: 78 pages, 31 figures, LaTex
General fluctuations of the type II pure spinor string on curved backgrounds
Creators: name: Chandia, Osvaldo
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The general fluctuations, in the form of vertex operators, for the type II superstring in the pure spinor formalism are considered. We review the construction of these vertex operators in flat space-time. We then review the type II superstrings in curved background in the pure spinor formalism to finally construct the vertex operators on a generic type II supergravity background.
description: harvmac-big, 13+1 pages. Added a section
HI observations of luminous infrared galaxy mergers
Creators: name: van Driel, W.
name: Gao, Y.
name: Monnier-Ragaigne, D.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: A total of 19 luminous infrared galaxy mergers, with L_IR~2 10^11 L_sun for H_0=75 km/s/Mpc, have been observed in the HI line at Nancay and four of them were observed at Arecibo as well. Of these 19, ten had not been observed before. Six were clearly detected, one of which for the first time. The objective was to statistically sample the \HI gas mass in luminous infrared mergers along a starburst merger sequence where the molecular CO gas content is already known.
description: 11 pages, accepted for Astron. Astrophys., 22/12/2000
title: Ανάλυση ενεργειακής αποδοτικότητας παθητικών τεχνικών σε κτίρια γραφείων
title: Energy efficiency analysis of passive techniques in office buildings
Creators: name: Χατηρα Ελπιδα-Ειρηνη
Publisher: name: Technical University of Crete
Year: 2025

description: Η παρούσα διπλωματική εργασία εξετάζει την ενεργειακή αποδοτικότητα παθητικών τεχνικών σε κτίρια γραφείων, αναδεικνύοντας τη σημασία τους στη μείωση της ενεργειακής κατανάλωσης.
Η κατανάλωση ενέργειας στα κτίρια αντιπροσωπεύει το 40% της συνολικής ενεργειακής κατανάλωσης και το 36% των εκπομπών CO₂ στην Ευρωπαϊκή Ένωση. Για τον λόγο αυτό, οι ευρωπαϊκές οδηγίες και άλλες νομικές ρυθμίσεις επιβάλλουν τη βελτίωση της ενεργειακής απόδοσης. Μια σημαντική λύση είναι το πρότυπο του Παθητικού Κτιρίου, το οποίο υπόσχεται έως και 90% μείωση στην κατανάλωση ενέργειας για θέρμανση και συμβάλλει στη βελτίωση της ποιότητας ζωής των ενοίκων. Μέχρι σήμερα, χιλιάδες κτίρια παγκοσμίως έχουν κατασκευαστεί ακολουθώντας αυτό το πρότυπο.
Στο πλαίσιο αυτής της μελέτης, πραγματοποιήθηκε η μοντελοποίηση ενός υφιστάμενου κτιρίου γραφείων του Πολυτεχνείου Κρήτης ως Παθητικού Κτιρίου, χρησιμοποιώντας το λογισμικό PHPP. Η διαδικασία περιλάμβανε τη θερμομόνωση και αεροστεγανότητα του κτιρίου, την αντικατάσταση κουφωμάτων και την προσθήκη συστήματος αερισμού. Επιπλέον, η ενεργειακή κατανάλωση μειώθηκε μέσω της αντικατάστασης του συστήματος θέρμανσης και του ηλεκτρομηχανολογικού εξοπλισμού, καθώς και μέσω της εγκατάστασης ηλεκτρικού θερμοσίφωνα και φωτοβολταϊκών πάνελ.
Έτσι, η παρούσα εργασία επιβεβαιώνει τη σημασία των παθητικών τεχνικών ως μέσο βελτίωσης της ενεργειακής απόδοσης και συμβολής στη βιώσιμη ανάπτυξη.
description: This thesis examines the energy efficiency of passive techniques in office buildings, highlighting their importance in reducing energy consumption.
Building energy consumption accounts for 40% of total energy use and 36% of CO₂ emissions in the European Union. For this reason, European directives and legal regulations require improvements in energy efficiency. A significant solution is the Passive House standard, which promises up to a 90% reduction in heating energy consumption and contributes to improving occupants’ quality of life. To date, thousands of buildings worldwide have been constructed following this standard.
In this study, an existing office building at the Technical University of Crete was modeled as a Passive House using the PHPP software. The process included thermal insulation and airtightness improvements, window frame replacement, and the addition of a ventilation system. Furthermore, energy consumption was reduced by upgrading the heating system and electromechanical equipment, as well as installing an electric water heater and photovoltaic panels.
This thesis confirms the significance of passive techniques as a means of enhancing energy efficiency and contributing to sustainable development.
Theoretical justification and error analysis for slender body theory with free ends
Creators: name: Mori, Yoichiro
name: Ohm, Laurel
name: Spirn, Daniel
Publisher: name: arXiv
Year: 2019
Subjects: subject: Analysis of PDEs (math.AP)
subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Mathematics
subject: FOS: Physical sciences

description: Slender body theory is a commonly used approximation in computational models of thin fibers in viscous fluids, especially in simulating the motion of cilia or flagella in swimming microorganisms. In [23], we developed a PDE framework for analyzing the error introduced by the slender body approximation for closed-loop fibers with constant radius $ε$, and showed that the difference between our closed-loop PDE solution and the slender body approximation is bounded by an expression proportional to $ε|\logε|$. Here we extend the slender body PDE framework to the free endpoint setting, which is more physically relevant from a modeling standpoint but more technically demanding than the closed loop analysis. The main new difficulties arising in the free endpoint setting are defining the endpoint geometry, identifying the extent of the 1D slender body force density, and determining how the well-posedness constants depend on the non-constant fiber radius. Given a slender fiber satisfying certain geometric constraints at the filament endpoints and a one-dimensional force density satisfying an endpoint decay condition, we show a bound for the difference between the solution to the slender body PDE and the slender body approximation in the free endpoint setting. The bound is a sum of the same $ε|\logε|$ term appearing in the closed loop setting and an endpoint term proportional to $ε$, where $ε$ is now the maximum fiber radius.
Continuity of Quark and Hadron Matter
Creators: name: Schaefer, Thomas
name: Wilczek, Frank
Publisher: name: arXiv
Year: 1998
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Condensed Matter (cond-mat)
subject: High Energy Physics - Theory (hep-th)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We review, clarify, and extend the notion of color-flavor locking. We present evidence that for three degenerate flavors the qualitative features of the color-flavor locked state, reliably predicted for high density, match the expected features of hadronic matter at low density. This provides, in particular, a controlled, weak-coupling realization of confinement and chiral symmetry breaking in this (slight) idealization of QCD.
description: 12 pages
Additional file 1 of Impact of demographic disparities in social distancing and vaccination on influenza epidemics in urban and rural regions of the United States
Creators: name: Meghendra Singh
name: Prasenjit Sarkhel
name: Kang, Gloria J.
name: Achla Marathe
name: Boyle, Kevin
name: Murray-Tuite, Pamela
name: Abbas, Kaja M.
name: Samarth Swarup
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Supplementary Information. Contains information regarding simulation compliance levels for different age groups and income groups in the two geographical regions. It also includes figures that describe the relationship between demographics and contact times. (PDF 228 kb)
The Bell Laboratories (13)CO Survey: Longitude-Velocity Maps
Creators: name: Lee, Youngung
name: Stark, A. A.
name: Kim, H. G.
name: Moon, D.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: A survey is presented of the Galactic plane in the J=1-0 transition of (13)CO. About 73,000 spectra were obtained with the 7 m telescope at Bell Laboratories over a ten-year period. The coverage of survey is (l, b) = (-5 to 117, -1 to +1), or 244 square degrees, with a grid spacing of 3' for |b| < 0.5, and a grid spacing of 6' for |b| > 0.5. The data presented here have been resampled onto a 3' grid. For 0.68 km/s channels, the rms noise level of the survey is 0.1 K on the $T_R^*$ scale. The raw data have been transformed into FITS format, and all the reduction processes, such as correcting for emission in the reference positions, baseline removal and interpolation were conducted within IRAF using the FCRAO task package and additional programs. The reduced data are presented here in the form of longitude-velocity color maps at each latitude. These data allow identification and classification of molecular clouds with masses in excess of ~ 1,000 solar masses throughout the first quadrant of the Galaxy. Spiral structure is manifested by the locations of the largest and brightest molecular clouds.
description: 23 pages, 7 figures, ApJS submitted (out of 41 frames of Figure4, only one is included becaue of size limit)
de-Broglie Wave-Front Engineering
Creators: name: Olshanii, M.
name: Dekker, N.
name: Herzog, C.
name: Prentiss, M.
Publisher: name: arXiv
Year: 1998
Subjects: subject: Quantum Physics (quant-ph)
subject: Condensed Matter (cond-mat)
subject: Atomic Physics (physics.atom-ph)
subject: FOS: Physical sciences

description: We propose a simple method for the deterministic generation of an arbitrary continuous quantum state of the center-of-mass of an atom. The method's spatial resolution gradually increases with the interaction time with no apparent fundamental limitations. Such de-Broglie Wave-Front Engineering of the atomic density can find applications in Atom Lithography, and we discuss possible implementations of our scheme in atomic beam experiments.
description: The figures' quality was improved, the text remains intact. 5 pages, 3 figures; submitted to PRL
Applying Large Language Models to DoD Software Acquisition: An Initial Experiment.
Creators: name: Schmidt, Douglas
name: Robert, John
Publisher: name: Carnegie Mellon University
Year: 2024
Subjects: Software Engineering

description: There is considerable interest in using generative AI tools, such as large language models (LLMs), to revolutionize industries and create new opportunities in the commercial and government domains. For many Department of Defense (DoD) software acquisition professionals, the promise of LLMs is appealing, but there’s also a deep-seated concern that LLMs do not address today’s challenges due to privacy concerns, potential for inaccuracy in the output, and lack of confidence or uncertainty about how to use LLMs effectively and responsibly. This blog post is the second in a series dedicated to exploring how generative AI, particularly LLMs such as ChatGPT, Claude, and Gemini, can be applied within the DoD to enhance software acquisition activities.
Deletion of Clock Gene Bmal1 Impaired the Chondrocyte Function due to Disruption of the HIF1α-VEGF Signaling Pathway
Creators: name: Ma, Zhengmin
name: Jin, Xinxin
name: Qian, Zhuang
name: Li, Fang
name: Xu, Mao
name: Zhang, Ying
name: Kang, Xiaomin
name: Li, Huixia
name: Gao, Xin
name: Zhao, Liting
name: Zhang, Zhuanmin
name: Zhang, Yan
name: Wu, Shufang
name: Sun, Hongzhi
Publisher: name: Taylor & Francis
Year: 2019
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Physiology
subject: Ecology
subject: Developmental Biology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Several studies have demonstrated the core circadian rhythm gene Bmal1 could regulate the clock control genes (CCGs) expression and maintain the integrity in cartilage tissue. In addition, its abnormal expression is connected with the occurrence and development of several diseases including osteoarthritis (OA). However, the relationship between Bmal1 and cartilage development still needs to be fully elucidated. Here, we bred tamoxifen-induced cartilage specific knockout mice to learn effects of Bmal1 on the cartilage development and its underlying mechanisms at specific time points. We observed that Bmal1 ablated mice showed growth retardation during puberty and the length of whole growth plate and the proliferation zone were both shorter than those in the control group. Deletion of Bmal1 significantly inhibited the chondrocytes proliferation and activated cells apoptosis in growth plate. Meanwhile, knockout of Bmal1 attenuated the expression of VEGF and HIF1α and enhanced the level of MMP13 and Runx2 in the growth plate chondrocytes. Consistent with these findings in vivo, ablation of Bmal1 could also lead to decrease chondrocytes proliferation, the expression of HIF1α and VEGF and elevate apoptosis in cultured chondrocytes. These findings suggest that Bmal1 plays a pivotal role in cartilage development by regulating the HIF1α-VEGF signaling pathway.
Agromyza audcenti Gibbs 2004
Creators: name: Bächli, Gerhard
name: Merz, Bernhard
name: Haenni, Jean-Paul
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Agromyzidae
Agromyza
Agromyza audcenti

description: Agromyza audcenti Gibbs, 2004. (Cerny & Merz 2007).
description: Published as part of Bächli, Gerhard, Merz, Bernhard & Haenni, Jean-Paul, 2014, Dritter Nachtrag zur Checkliste der Diptera der Schweiz, pp. 119-140 in Entomo Helvetica 7 on page 127, DOI: 10.5169/seals-985967, http://zenodo.org/record/8096745
A Dicey Diagnosis: Pre-auricular Swelling of Tubercular Origin
Creators: name: Sphoorthi Basavannaiah
Publisher: name: Zenodo
Year: 2021
Subjects: Pre-auricular sinus
extra-pulmonary region
tuberculosis
lymphadenitis

description: Pre-auricular sinuses are congenital malformations that typically develop at the anterior margin of the ascending limb of the external ear's helix. They are not uncommon ear anomalies, and since they are typically asymptomatic, they are not frequently diagnosed. Tuberculosis is a major infection that affects both children and adults around the world, resulting in substantial morbidity and mortality. They are most common in the extra pulmonary area, where lymphadenitis is the most common clinical manifestation. Lymph nodes, mostly cervical, mediastinal, and axillary and inguinal nodes, are often involved. Extrapulmonary tuberculosis is difficult to diagnose since there are no constitutional signs and a high degree of clinical suspicion is needed. Here, is a rare case presented by an adult male with infected pre-auricular sinus coexisting with lymphadenitis in right pre-auricular region.
Community structure in co-inventor networks affects time to first citation for patents
Creators: name: Doonan, W.
name: Higham, K. W.
name: Governale, M.
name: Zülicke, U.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Social and Information Networks (cs.SI)
subject: Physics and Society (physics.soc-ph)
subject: FOS: Computer and information sciences
subject: FOS: Physical sciences

description: We have investigated community structure in the co-inventor network of a given cohort of patents and related this structure to the dynamics of how these patents acquire their first citation. A statistically significant difference in the time lag until first citation is linked to whether or not this citation comes from a patent whose listed inventors share membership in the same communities as the inventors of the cited patent. Although the inventor-community structures identified by different community-detection algorithms differ in several aspects, including the community-size distribution, the magnitude of the difference in time to first citation is robustly exhibited. Our work is able to quantify the expected acceleration of knowledge flow within inventor communities and thereby further establishes the utility of network-analysis tools for studying innovation dynamics.
description: 16 pages, 4 figures, BioMedCentral article style, to appear in Applied Network Science - special issue 'Community structure in networks'
Many-body localization in Landau level subbands
Creators: name: Krishna, Akshay
name: Ippoliti, Matteo
name: Bhatt, R. N.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We explore the problem of localization in topological and non-topological nearly-flat subbands derived from the lowest Landau level, in the presence of quenched disorder and short-range interactions. We consider two models: a suitably engineered periodic potential, and randomly distributed point-like impurities. We perform numerical exact diagonalization on a torus geometry and use the mean level spacing ratio $\langle r \rangle$ as a diagnostic of ergodicity. For topological subbands, we find there is no ergodicity breaking in both the one and two dimensional thermodynamic limits. For non-topological subbands, in constrast, we find evidence of an ergodicity breaking transition at finite disorder strength in the one-dimensional thermodynamic limit. Intriguingly, indications of similar behavior in the two-dimensional thermodynamic limit are found, as well. This constitutes a novel, $\textit{continuum}$ setting for the study of the many-body localization transition in one and two dimensions.
Agromyza erythrocephala Hendel 1920
Creators: name: Bächli, Gerhard
name: Merz, Bernhard
name: Haenni, Jean-Paul
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Agromyzidae
Agromyza
Agromyza erythrocephala

description: Agromyza erythrocephala Hendel, 1920.
 1 ♂, Neuchâtel (NE), Grande Cassarde, 545 m, 19.04.2008, leg. J.-P. Haenni (MHNG) Neufund.
description: Published as part of Bächli, Gerhard, Merz, Bernhard & Haenni, Jean-Paul, 2014, Dritter Nachtrag zur Checkliste der Diptera der Schweiz, pp. 119-140 in Entomo Helvetica 7 on page 127, DOI: 10.5169/seals-985967, http://zenodo.org/record/8096745
Additional file 5: of Using formalin fixed paraffin embedded tissue to characterize the preterm gut microbiota in necrotising enterocolitis and spontaneous isolated perforation using marginal and diseased tissue
Creators: name: Stewart, Christopher
name: Fatemizadeh, Roxana
name: Parsons, Pamela
name: Lamb, Christopher
name: Shady, Deborah
name: Petrosino, Joseph
name: Hair, Amy
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Medicine
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Figure S3. Stacked bar plot of dominant phyla. Marginal and representative sections from each infant were included separated by necrotising enterocolitis (NEC) and spontaneous intestinal perforation (SIP). (PDF 169 kb)
The Lyman-Alpha Forest at 1.5 < z < 4
Creators: name: Kim, Tae-Sun
name: Cristiani, Stefano
name: D'Odorico, Sandro
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Using high resolution (R ~ 45000), high S/N (20-50) VLT/UVES observations covering the Lyman-alpha forest at 1.5 < z < 2.4 combined with similar observations at z > 2.4 from the literature, we have presented the redshift evolution of the Lyman-alpha forest at 1.5 < z < 4. We applied two parallel analyses: the tradiational Voigt profile fitting and a statistical measure of the flux. The general conclusions from both analyses are in good agreement. In general, the properties of the Lyman-alpha forest at 1.5 < z < 2.4, such as the different density distribution function, the correlation strengths and the mean neutral hydrogen opacity, evolve as expected extrapolating from at z > 2.4. These results suggest the main drive of the redshift evolution of the forest at 1.5 < z < 4 is the Hubble expansion. When combined with the HST observations from the QSO key project at z < 1.7, a flattening of the line number density evolution does seem to occur at z ~ 1.2. The result suggests that the ionizing UV background might not evolve as strongly as a QSO-dominated background, indicating a contribution to the UV background from galaxies at z < 2. The lower cut-off Doppler paramter at the fixed column denisty log N = 13.5 shows a slight increase as z decreases, with a possible local maximum at z ~ 2.9. The slope of the lower cut-off Doppler parameter is not well-defined with z. However, it is flatter at z < 3.1 than at z ~ 3.75.
description: 27 pages, 22 Encapsulated-Postscript figures, 3 ASCII tables; Corrected for typos and grammatical errors, inclusions of errors in some tables; Accepted to Astronomy and Astrophysics
Additional file 1: of Analysis of LPI-causing mutations on y+LAT1 function and localization
Creators: name: Rotoli, Bianca
name: Barilli, Amelia
name: Ingoglia, Filippo
name: Visigalli, Rossana
name: Bianchi, Massimiliano
name: Ferrari, Francesca
name: Martinelli, Diego
name: Dionisi-Vici, Carlo
name: DallâAsta, Valeria
Publisher: name: figshare
Year: 2019
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Developmental Biology
subject: 60506 Virology

description: Figure S1. Confocal analysis of eGFP-tagged yâ +â LAT1 mutants in CHO cells. (PDF 484 kb)
Agromyza luteitarsis
Creators: name: Bächli, Gerhard
name: Merz, Bernhard
name: Haenni, Jean-Paul
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy

description: Agromyza luteitarsis (Rondani, 1875). (Cerny 2009).
description: Published as part of Bächli, Gerhard, Merz, Bernhard & Haenni, Jean-Paul, 2014, Dritter Nachtrag zur Checkliste der Diptera der Schweiz, pp. 119-140 in Entomo Helvetica 7 on page 127, DOI: 10.5169/seals-985967, http://zenodo.org/record/8096745
Stochastic bursting in unidirectionally delay-coupled noisy excitable systems
Creators: name: Zheng, Chunming
name: Pikovsky, Arkady
Publisher: name: arXiv
Year: 2019
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Neurons and Cognition (q-bio.NC)
subject: FOS: Physical sciences
subject: FOS: Biological sciences

description: We show that \emph{stochastic bursting} is observed in a ring of unidirectional delay-coupled noisy excitable systems, thanks to the combinational action of time-delayed coupling and noise. Under the approximation of timescale separation, i.e., when the time delays in each connection are much larger than the characteristic duration of the spikes, the observed rather coherent spike pattern can be described by idealized coupled point processes with a leader-follower relationship. We derive analytically the statistics of the spikes in each unit, pairwise correlations between any two units, and the spectrum of the total output from the network. Theory is in a good agreement with the simulations with a network of theta-neurons.
description: accepted in Chaos
Time evolution of condensed state of interacting bosons with reduced number fluctuation in a leaky box
Creators: name: Shimizu, Akira
name: Inoue, Jun-ichi
Publisher: name: arXiv
Year: 1998
Subjects: subject: Quantum Physics (quant-ph)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We study the time evolution of the Bose-Einstein condensate of interacting bosons confined in a leaky box, when its number fluctuation is initially (t=0) suppressed. We take account of quantum fluctuations of all modes, including k = 0. We identify a ``natural coordinate'' b_0 of the interacting bosons, by which many physical properties can be simply described. Using b_0, we successfully define the cosine and sine operators for interacting many bosons. The wavefunction, which we call the ``number state of interacting bosons'' (NSIB), of the ground state that has a definite number N of interacting bosons can be represented simply as a number state of b_0. We evaluate the time evolution of the reduced density operator ρ(t) of the bosons in the box with a finite leakage flux J, in the early time stage for which Jt << N. It is shown that ρ(t) evolves from a single NSIB at t = 0, into a classical mixture of NSIBs of various values of N at t > 0. We define a new state called the ``number-phase squeezed state of interacting bosons'' (NPIB). It is shown that ρ(t) for t>0 can be rewritten as the phase-randomized mixture (PRM) of NPIBs. It is also shown that the off-diagonal long-range order (ODLRO) and the order parameter defined by it do not distinguish the NSIB and NPIB. On the other hand, the other order parameter Ψ, defined as the expectation value of the boson operator, has different values among these states. For each element of the PRM of NPIBs, we show that Ψevolves from zero to a finite value very quickly. Namely, after the leakage of only two or three bosons, each element acquires a full, stable and definite (non-fluctuating) value of Ψ.
description: 25 pages including 3 figures. To appear in Phys. Rev. A (1999). The title is changed to stress the time evolution. Sections II, III and IV of the previous manuscript have been combined into one section. The introduction and summary of the previous manuscript have been combined into the Introduction and Summary. The names and abbreviations of quantum states are changed to stress that they are for interacting many bosons. More references are cited
The Nelond family, Lewes Priory and East Grinstead
Creators: name: Leppard, M J
name: Whittick, Christopher
Publisher: name: Archaeology Data Service
Year: 2019

description: Sussex Archaeological Collections, 156, 137-145
description: The magnificent brass of Thomas Nelond, prior of Lewes 1414-32, in Cowfold church in Sussex is widely known (Fig. 1). This article places him in the context of his family, first encountered in 1296 at a typical Wealden farm in East Grinstead in the north of the county but rising to considerable wealth and local status through some 150 years. His work as prior is not treated, apart from one recent discovery of evidence of it in that parish. The article also cites some earlier dates for the name than given by the English Place-Name Society, interprets the road passing the eponymous farmstead as an ancient droveway from Hamsey to the Surrey border that became the highway from Lewes to East Grinstead and London, and advances an explanation of the presence of the brass at Cowfold.
Additional file 9 of Antibody conversion rates to SARS-CoV-2 in saliva from children attending summer schools in Barcelona, Spain
Creators: name: Dobaño, Carlota
name: Alonso, Selena
name: Fernández de Sevilla, Mariona
name: Vidal, Marta
name: Jiménez, Alfons
name: Pons Tomas, Gemma
name: Jairoce, Chenjerai
name: Melé Casas, María
name: Rubio, Rocío
name: Hernández García, María
name: Ruiz-Olalla, Gemma
name: Girona-Alarcón, Mònica
name: Barrios, Diana
name: Santano, Rebeca
name: Mitchell, Robert A.
name: Puyol, Laura
name: Mayer, Leonie
name: Chi, Jordi
name: Rodrigo Melero, Natalia
name: Carolis, Carlo
name: Garcia-Miquel, Aleix
name: Bonet-Carne, Elisenda
name: Claverol, Joana
name: Cubells, Marta
name: Fortuny, Claudia
name: Fumadó, Victoria
name: Jou, Cristina
name: Muñoz-Almagro, Carmen
name: Izquierdo, Luis
name: Bassat, Quique
name: Gratacós, Eduard
name: Aguilar, Ruth
name: García-García, Juan José
name: Moncunill, Gemma
name: Jordan, Iolanda
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Additional file 9: Figure S6. Radar charts of antibody levels by sex
Single Channel Josephson Effect in a High Transmission Atomic Contact
Creators: name: Senkpiel, Jacob
name: Dambach, Simon
name: Etzkorn, Markus
name: Drost, Robert
name: Padurariu, Ciprian
name: Kubala, Björn
name: Belzig, Wolfgang
name: Yeyati, Alfredo Levy
name: Cuevas, Juan Carlos
name: Ankerhold, Joachim
name: Ast, Christian R.
name: Kern, Klaus
Publisher: name: arXiv
Year: 2018
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: The Josephson effect in scanning tunneling microscopy (STM) is an excellent tool to probe the properties of the superconducting order parameter on a local scale through the Ambegaokar-Baratoff (AB) relation. Using single atomic contacts created by means of atom manipulation, we demonstrate that in the extreme case of a single transport channel through the atomic junction modifications of the current-phase relation lead to significant deviations from the linear AB formula relating the critical current to the involved gap parameters. Using the full current-phase relation for arbitrary channel transmission, we model the Josephson effect in the dynamical Coulomb blockade regime because the charging energy of the junction capacitance cannot be neglected. We find excellent agreement with the experimental data. Projecting the current-phase relation onto the charge transfer operator shows that at high transmission multiple Cooper pair tunneling may occur. These deviations become non-negligible in Josephson-STM, for example, when scanning across single adatoms.
description: 9 pages, 6 figures, including supplementary information