cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Lanius tigrinus Drapiez 1828
Creators: name: Paperna, Ilan
name: Keong, Malcolm Soh Chu
name: May, Charlotte Yap Aye
Publisher: name: Zenodo
Year: 2008
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Aves
Passeriformes
Laniidae
Lanius
Lanius tigrinus

description: Lanius tigrinus
 Locality. – Malaysia: Pasoh, 1998; Singapore: Nee Soon, 1998.
 Description.– Available blood films were faded. The infected erythrocytes are distorted with a displaced laterally or distally nucleus. They contain either a schizont, with 5–12 nuclei, or one to two usually rounded gametocytes (4.8 ± 1.2 × 3.44 ± 1.07; range 3.3–5.94 × 2.2–5.06) with a few (one to five), sometimes aggregated coarse pigment granules, and outlines of one or two vacuoles. The pigment granules in some trophozoites are aggregated, or encircle the vacuole; the faded state of the stain obscures other details. Infected erythrocytes are 12.7 ± 0.91 × 7.1 ± 0.91 with 5.72 ± 0.39 × 2.3 ± 0.30 nuclei.
 Remarks. – Laird (1997) lists Lanius spp. among the commonest hosts of Pla. (H.) matutinum (Huff, 1937) Coradetti et al., 1960 in SE Asia. Originally isolated from Turdus migratorius in North America, most of the descriptions were made from infections in experimental hosts. The redescription (Corradetti et al., 1960) from the European host, Turdus iliacus, as cited by Laird, also incorporates data from experimental hosts. Neither the faded state of our specimens, nor Laird’s description and illustrations, including of the infection from Lan. cristatus, can provide an unambiguous identification of the Plasmodium species found.
description: Published as part of Paperna, Ilan, Keong, Malcolm Soh Chu & May, Charlotte Yap Aye, 2008, Haemosporozoan Parasites Found In Birds In Peninsular Malaysia, Singapore, Sarawak And Java, pp. 211-243 in Raffles Bulletin of Zoology 56 (2) on page 223, DOI: 10.5281/zenodo.5340123
Lie symmetries of Einstein's vacuum equations in N dimensions
Creators: name: Marchildon, Louis
Publisher: name: arXiv
Year: 1998
Subjects: subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: We investigate Lie symmetries of Einstein's vacuum equations in N dimensions, with a cosmological term. For this purpose, we first write down the second prolongation of the symmetry generating vector fields, and compute its action on Einstein's equations. Instead of setting to zero the coefficients of all independent partial derivatives (which involves a very complicated substitution of Einstein's equations), we set to zero the coefficients of derivatives that do not appear in Einstein's equations. This considerably constrains the coefficients of symmetry generating vector fields. Using the Lie algebra property of generators of symmetries and the fact that general coordinate transformations are symmetries of Einstein's equations, we are then able to obtain all the Lie symmetries. The method we have used can likely be applied to other types of equations.
Implementation of a parallel algorithm for the symmetric positive definite systems of equations on the CRAY-T3E
Creators: name: Wankar, Rajeev
name: Ehrig, Rainald
name: Chaudhari, N. S.
name: Fehr, Elfriede
Publisher: name: Freie Universität Berlin
Year: 1999
Subjects: subject: SPD
subject: MPI
subject: SHMEM
subject: 000 Informatik, Informationswissenschaft, allgemeine Werke::000 Informatik, Wissen, Systeme::004 Datenverarbeitung; Informatik

description: A parallel algorithm for the solution of dense Symmetric Positive Definite (SPD) systems of equations Ax = b has been designed for the implementation on the CRAY T3E. One of the numerically stable methods for the solution of this system is proposed by Delosme & Ipsen [3]. In order to implement this algorithm on the CRAY T3E, we require to handle the procedures involved in a slightly different way. These implementation issues are discussed in detail. The actual timings for different communication schemes, on different sets of data values and varying number of processors have been tested and reported.
Scaling Up Inductive Logic Programming by Learning from Interpretations
Creators: name: Blockeel, Hendrik
name: De Raedt, Luc
name: Jacobs, Nico
name: Demoen, Bart
Publisher: name: arXiv
Year: 2000
Subjects: subject: Machine Learning (cs.LG)
subject: FOS: Computer and information sciences
subject: I.2.6 ; I.2.3

description: When comparing inductive logic programming (ILP) and attribute-value learning techniques, there is a trade-off between expressive power and efficiency. Inductive logic programming techniques are typically more expressive but also less efficient. Therefore, the data sets handled by current inductive logic programming systems are small according to general standards within the data mining community. The main source of inefficiency lies in the assumption that several examples may be related to each other, so they cannot be handled independently. Within the learning from interpretations framework for inductive logic programming this assumption is unnecessary, which allows to scale up existing ILP algorithms. In this paper we explain this learning setting in the context of relational databases. We relate the setting to propositional data mining and to the classical ILP setting, and show that learning from interpretations corresponds to learning from multiple relations and thus extends the expressiveness of propositional learning, while maintaining its efficiency to a large extent (which is not the case in the classical ILP setting). As a case study, we present two alternative implementations of the ILP system Tilde (Top-down Induction of Logical DEcision trees): Tilde-classic, which loads all data in main memory, and Tilde-LDS, which loads the examples one by one. We experimentally compare the implementations, showing Tilde-LDS can handle large data sets (in the order of 100,000 examples or 100 MB) and indeed scales up linearly in the number of examples.
description: 37 pages
MOESM1 of A GH51 Îą-l-arabinofuranosidase from Talaromyces leycettanus strain JCM12802 that selectively drives synergistic lignocellulose hydrolysis
Creators: name: Tu, Tao
name: Li, Xiaoli
name: Meng, Kun
name: Bai, Yingguo
name: Wang, Yuan
name: Wang, Zhenxing
name: Yao, Bin
name: Luo, Huiying
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Developmental Biology
subject: Cancer

description: Additional file 1. SDS-PAGE analysis of the purified recombinant TlAbf51. Lanes: M, the standard protein molecular weight markers; 1, the purified recombinant TlAbf51.
Microchelonus (Microchelonus) subarcuatilis TOBIAS 1986
Creators: name: Aydogdu, M.
name: Beyarslan, A.
Publisher: name: Zenodo
Year: 2006
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Braconidae
Microchelonus
Microchelonus subarcuatilis

description: Microchelonus (Microchelonus) subarcuatilis TOBIAS 1986
M a t e r i a l e x a m i n e d: Amasya-Merzifon-Tavsan mountains-Uzunagac, mixed forests, 1600m, 09.07.2003, 1♀; Bilecik-Osmaneli-Icmeler, mixed forests, 800m, 09.07.1993, 4♀♀, 233; Bursa-Mustafakemalpasa-Sogutalan, mixed forests, 400m, 11.07.1993, 17♀♀, 1433; Canakkale-Biga-Camlidere, pasture, 50m, 20.08.1994, 3♀♀, 333; Kaz mountains-Hacifakili, mixed forests, 700m, 16.09.1992, 2♀♀; Kirklareli-Luleburgaz-Seyitler, pasture, 75m, 18.07.2001, 1♀; Tekirdag-Ganos mountains, pasture, 760m, 14.07.1986, 1♀.
D i s t r i b u t i o n i n T u r k e y: Marmara and Western Blacksea regions.
G e n e r a l D i s t r i b u t i o n: Hungary, Mongolia, Turkey (First record).
H o s t s: So far unknown.
description: Published as part of Aydogdu, M. & Beyarslan, A., 2006, Microchelonus SZÉPLIGETI 1908 (Hymenoptera: Braconidae: Cheloninae) species from the Marmara, Western and Blacksea regions of Turkey, pp. 397-407 in Linzer biologische Beiträge 38 (1) on page 403, DOI: 10.5281/zenodo.5433329
[HECAT] D7.5 Impact Measurement Report
Creators: name: Hayes, Órla
name: Tuite, Aisling
name: Jordan, Antoinette
Publisher: name: Zenodo
Year: 2023
Subjects: subject: Impact
subject: disruptive technology
subject: Public services
subject: Public Employment Services

description: AbstractThis report presents an account of the impact actions taken by the HECAT consortium during the research period from February 2020 to July 2023. The actions are guided by the objectives, work programme and expected impacts set out in the proposal document and Description of Action. The planned impacts and actions were developed to address the Horizon 2020 call DT-TRANSFORMATIONS-02, in the first instance, and to advance practices and perspectives around the digitalisation of Public Employment Services (PES). The impacts and the aspiration for HECAT was to develop a digital system for use in PES that directly addresses the individual needs of unemployed people and the practical needs of case workers and counsellors.
Asymptotic Profiles of Nonlinear Homogeneous Evolution Equations of Gradient Flow Type
Creators: name: Bungert, Leon
name: Burger, Martin
Publisher: name: arXiv
Year: 2019
Subjects: subject: Analysis of PDEs (math.AP)
subject: FOS: Mathematics
subject: 35K90, 35P30, 47J10, 47J35

description: This work is concerned with the gradient flow of absolutely $p$-homogeneous convex functionals on a Hilbert space, which we show to exhibit finite ($p<2$) or infinite extinction time ($p \geq 2$). We give upper bounds for the finite extinction time and establish convergence rates of the flow. Moreover, we study next order asymptotics and prove that asymptotic profiles of the solution are eigenfunctions of the subdifferential operator of the functional. To this end, we compare with solutions of an ordinary differential equation which describes the evolution of eigenfunction under the flow. Our work applies, for instance, to local and nonlocal versions of PDEs like $p$-Laplacian evolution equations, the porous medium equation, and fast diffusion equations, herewith generalizing many results from the literature to an abstract setting. We also demonstrate how our theory extends to general homogeneous evolution equations which are not necessarily a gradient flow. Here we discover an interesting integrability condition which characterizes whether or not asymptotic profiles are eigenfunctions.
description: Version as published in Journal of Evolution Equations
title: Investigation of Novel Antimalarial Agents and Novel Target Identification Approaches
Creators: name: Sumanadasa, Subathdrage Dulangi Madushika
Publisher: name: Griffith University
Year: 2015
Subjects: subject: Antimalarial drug
subject: Antimalarial medications

description: Malaria remains a major global health problem causing >600,000 deaths annually [1]. Efforts to control malaria are hampered by parasite drug resistance, insecticide resistance in mosquitoes, and the lack of an effective vaccine. In the last decade only one new chemotype, the spiroindolones, has progressed to clinical trials for malaria treatment [2, 3]. To address this significant problem the identification and development of new antimalarial agents is a priority. Part of this process includes ensuring that sufficient drug leads are available to prime the drug discovery pipeline, particularly those with novel modes of action in order to limit issues of cross-resistance with existing drugs [4]. While high throughput screening campaigns have identified thousands of potential antimalarial compounds from big Pharma libraries [5, 6], antimalarial target information on most compounds are lacking. Screening different libraries and pharmacophores is also recognised as being crucial to ensure chemical diversity [7]. There is also an increasing interest in repurposing existing drugs or drug classes or using them as starting point for discovery of new antimalarial agents. One of the aims of this thesis was to address the need for new antimalarial drug leads by investigating three compound classes with demonstrated clinical efficacy against cancer, HIV and other human diseases in a so called “piggyback” approach.
The Igusa modular forms and ``the simplest'' Lorentzian Kac--Moody algebras
Creators: name: Gritsenko, Valeri A.
name: Nikulin, Viacheslav V.
Publisher: name: arXiv
Year: 1996
Subjects: subject: Algebraic Geometry (math.AG)
subject: High Energy Physics - Theory (hep-th)
subject: Quantum Algebra (math.QA)
subject: FOS: Mathematics
subject: FOS: Physical sciences
subject: 14D20; 10D20; 17B65

description: We find automorphic corrections for the Lorentzian Kac--Moody algebras with the simplest generalized Cartan matrices of rank 3: A_{1,0} = 2 0 -1 0 2 -2 -1 -2 2 and A_{1,I} = 2 -2 -1 -2 2 -1 -1 -1 2 For A_{1,0} this correction is given by the Igusa Sp_4(Z)-modular form χ_{35} of weight 35, and for A_{1,I} by a Siege modular form of weight 30 with respect to a 2-congruence subgroup. We find infinite product or sum expansions for these forms. Our method of construction of χ_{35} leads to the direct construction of Siegel modular forms by infinite product expansions, whose divisors are the Humbert surfaces with fixed discriminants. Existence of these forms was proved by van der Geer in 1982 using some geometrical consideration. We announce a list of all hyperbolic symmetric generalized Cartan matrices A of rank 3 such that A has elliptic or parabolic type, A has a lattice Weyl vector, and A contains the affine submatrix \tilde{A}_1.
description: 40 pages, no figures. AMS-TeX
Extractive Processes, Global Production Networks and Inequalities
Creators: name: Radhuber, Isabella M.
Publisher: name: Freie Universität Berlin
Year: 2015
Subjects: subject: global production networks
subject: extractive processes
subject: inequalities
subject: 300 Sozialwissenschaften

description: In the context of an increasing economic integration and the rising importance of the Global South regarding global trade and companies, scholarly debates that try to grasp the shape of this increasingly integrated global economy addressed global production networks. They have mostly focused on manufacturing and agricultural activities and to a lesser extent on services, whereas analysis on traditional extractive activities has been incorporated only recently. In this paper, I focus on the relevance of extractive processes for global production networks in a broader sense. I argue that these matter not only in terms of traditional extractive activities such as mining and hydrocarbons. Extractive processes matter for all production networks, because they all depend upon the extractive capture of nature. This focus points to struggles around nature appropriation, the co-constitution of social relations and the “natural” environment and processes of valuation. I then specifically sketch how inequalities in extractive production networks can be traced in terms of unequal labor division and power relations (specifically the hegemonic stability of production networks). Combining global production network analysis, regulation theory and extractivism analysis can furthermore reveal how these inequalities unfold in specific political economic contexts and across scales
A General Framework for Uncertainty Estimation in Deep Learning
Creators: name: Loquercio, Antonio
name: Segù, Mattia
name: Scaramuzza, Davide
Publisher: name: arXiv
Year: 2019
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: Neural networks predictions are unreliable when the input sample is out of the training distribution or corrupted by noise. Being able to detect such failures automatically is fundamental to integrate deep learning algorithms into robotics. Current approaches for uncertainty estimation of neural networks require changes to the network and optimization process, typically ignore prior knowledge about the data, and tend to make over-simplifying assumptions which underestimate uncertainty. To address these limitations, we propose a novel framework for uncertainty estimation. Based on Bayesian belief networks and Monte-Carlo sampling, our framework not only fully models the different sources of prediction uncertainty, but also incorporates prior data information, e.g. sensor noise. We show theoretically that this gives us the ability to capture uncertainty better than existing methods. In addition, our framework has several desirable properties: (i) it is agnostic to the network architecture and task; (ii) it does not require changes in the optimization process; (iii) it can be applied to already trained architectures. We thoroughly validate the proposed framework through extensive experiments on both computer vision and control tasks, where we outperform previous methods by up to 23% in accuracy.
description: Accepted for publication in the Robotics and Automation Letters 2020, and for presentation at the International Conference on Robotics and Automation (ICRA) 2020
MOESM2 of A GH51 Îą-l-arabinofuranosidase from Talaromyces leycettanus strain JCM12802 that selectively drives synergistic lignocellulose hydrolysis
Creators: name: Tu, Tao
name: Li, Xiaoli
name: Meng, Kun
name: Bai, Yingguo
name: Wang, Yuan
name: Wang, Zhenxing
name: Yao, Bin
name: Luo, Huiying
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Additional file 2. . LC-ESI-MS/MS analysis of the purified recombinant TlAbf51.
Analysis of trans eSNPs infers regulatory network architecture
Creators: Kreimer, Anat
Publisher: name: Columbia University
Year: 2014
Subjects: subject: Bioinformatics
subject: FOS: Computer and information sciences

description: eSNPs are genetic variants associated with transcript expression levels. The characteristics of such variants highlight their importance and present a unique opportunity for studying gene regulation. eSNPs affect most genes and their cell type specificity can shed light on different processes that are activated in each cell. They can identify functional variants by connecting SNPs that are implicated in disease to a molecular mechanism. Examining eSNPs that are associated with distal genes can provide insights regarding the inference of regulatory networks but also presents challenges due to the high statistical burden of multiple testing. Such association studies allow: simultaneous investigation of many gene expression phenotypes without assuming any prior knowledge and identification of unknown regulators of gene expression while uncovering directionality.
      This thesis will focus on such distal eSNPs to map regulatory interactions between different loci and expose the architecture of the regulatory network defined by such interactions. We develop novel computational approaches and apply them to genetics-genomics data in human. We go beyond pairwise interactions to define network motifs, including regulatory modules and bi-fan structures, showing them to be prevalent in real data and exposing distinct attributes of such arrangements. We project eSNP associations onto a protein-protein interaction network to expose topological properties of eSNPs and their targets and highlight different modes of distal regulation. Overall, our work offers insights concerning the topological structure of human regulatory networks and the role genetics plays in shaping them.
Velocity Distribution of Inelastic Granular Gas in Homogeneous Cooling State
Creators: name: Nakanishi, Hiizu
Publisher: name: arXiv
Year: 2002
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: The velocity distribution of inelastic granular gas is examined numerically on two dimensional hard disk system in nearly elastic regime using molecular dynamical simulations. The system is prepared initially in the equilibrium state with the Maxwell-Boltzmann distribution, then after a several inelastic collisions per particle, the system falls in the state that the Boltzmann equation predicts with the stationary form of velocity distribution. It turns out, however, that due to the velocity correlation the form of the distribution function does not stay time-independent, but is gradually returning to the Maxwellian immediately after the initial transient till the clustering instability sets in. It shows that, even in the homogeneous cooling state, the velocity correlation in the inelastic system invalidates the assumption of molecular chaos and the prediction by the Boltzmann equation fails.
description: 11 pages, 7 figures
Pycnonotus simplex Lesson 1839
Creators: name: Paperna, Ilan
name: Keong, Malcolm Soh Chu
name: May, Charlotte Yap Aye
Publisher: name: Zenodo
Year: 2008
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Aves
Passeriformes
Pycnonotidae
Pycnonotus
Pycnonotus simplex

description: Pycnonotus simplex
 Locality. – Indonesia: Java, Lingo lowland secondary forest, Apr.2001 and 2002.
  Type host. – Pycnonotus jocosus  (Malim, India).
  Remarks on Haemoproteu s spp. of Pycnonotidae. –  We are certain of the identity of H. sanguinis in all the examined Pycnonotidae, but we are not certain about the identity of Hae. otocompsae. Both occur in the same individual host, but Hae. sanguinis outnumbers the presumed Hae. otocompsae in all examined hosts. At times, differentiation between Hae. otocompsae and Hae. sanguinis is difficult. The few microgametocytes presumably of Hae. otocompsae seen in the Javan material occupy three-quarters or more of the erythrocyte (robust) while grossly displacing the erythrocyte nucleus (NDR 0.47; in Rahal et al. (1987) description NDR = 0.55). In the Malaysian material, they cause swelling of the erythrocyte without displacing its nuclei. The microgametocytes of many Haemoproteus spp., however, with aging, turn robust, and displace the host-cell nucleus. Differentiation between macrogametocytes of both species (both relatively slender) based on the degree of erythrocyte nuclear displacement (0.72 ± 0.09 vs. 0.82 ± 0.17 for Hae. otocompsae and Hae. sanguinis, respectively) is even more ambiguous. In conclusion, we have doubts as to the validity of the differences and may justify the synonymy proposed by Peirce (1984).
 Leucocytozoon pycnonoti Bennett, Earle & Peirce 1992 (Fig. 17)
description: Published as part of Paperna, Ilan, Keong, Malcolm Soh Chu & May, Charlotte Yap Aye, 2008, Haemosporozoan Parasites Found In Birds In Peninsular Malaysia, Singapore, Sarawak And Java, pp. 211-243 in Raffles Bulletin of Zoology 56 (2) on page 232, DOI: 10.5281/zenodo.5340123
Are pulmonary hemostasis and fibrinolysis out of balance in equine chronic pneumopathies?
Creators: name: Barton, Ann Kristin
name: Wirth, Caroline
name: Bondzio, Angelika
name: Einspanier, Ralf
name: Gehlen, Heidrun
Publisher: name: Freie Universität Berlin
Year: 2017
Subjects: subject: chronic interstitial pneumopathy
subject: horses
subject: inflammatory airway disease
subject: inflammatory biomarker
subject: recurrent airway obstruction
subject: 600 Technik, Medizin, angewandte Wissenschaften::630 Landwirtschaft

description: Clinical examination, bronchoalveolar lavage fluid (BALF) cytology, acute- phase protein, and pulmonary hemostasis and fibrinolysis marker (fibrinogen, serum amyloid A [SAA], and D-dimer) results were compared between control and respiratory disease-affected horses. Using a clinical scoring system, horses (n = 58) were classified as respiratory disease-free (Controls, n = 15) or with recurrent airway obstruction (RAO; n = 18), inflammatory airway disease (n = 14) or chronic interstitial pneumopathy (n = 11). There were no significant differences in fibrinogen concentrations among groups, but there was a trend toward a lower value in controls (median 0.0024 g/L) than in horses with chronic pneumopathies (median 0.0052 g/L), in particular, those with RAO (median 0.0062 g/L). Fibrinogen concentration was positively correlated with percentage of neutrophils in BALF (rs = 0.377, p = 0.004). SAA concentrations were low; 65.5% of samples were below the detection limit. D-dimer concentrations were also low and quantifiable concentrations were only obtained after ultrafiltration and only in RAO (median 0.1 mg/L). In conclusion, there was limited evidence of increased coagulatory activity in chronic pneumopathies, apart from RAO. It is uncertain whether fibrinogen and D-dimer concentrations increased due to their role as acute-phase proteins or as a misbalance of coagulation and fibrinolysis.
On the Moyal quantized BKP type hierarchies
Creators: name: Sen, Dolan Chapa
name: Chowdhury, A. Roy
Publisher: name: arXiv
Year: 1998
Subjects: subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: Quantization of BKP type equations are done through the Moyal bracket and the formalism of pseudo-differential operators. It is shown that a variant of the dressing operator can also be constructed for such quantized systems.
Additional file 7: of Stock identification of minor carp, Cirrhinus reba, Hamilton 1822 through landmark-based morphometric and meristic variations
Creators: name: Rokhsana Ethin
name: Md Hossain
name: Animesh Roy
name: Rutegwa, Marcellin
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics

description: Table S5. Pooled within-groups correlations between discriminating variables and standardized canonical discriminant functions based on truss measurement (variables ordered by absolute size of correlation within function, *denotes the largest absolute correlation between each variable and any discriminant functions).Â (DOCX 16 kb)
Diagnosing Tsallis Holographic Dark Energy models with interactions
Creators: name: Zhang, Nan
name: Wu, Ya-Bo
name: Chi, Jia-Nan
name: Yu, Zhe
name: Xu, Dong-Fang
Publisher: name: arXiv
Year: 2019
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: It has been found that the geometrical diagnostic methods can break the degeneracy for dark energy models. In this paper, we investigate the $Om$ diagnostic, the statefinder hierarchy $S_{n}$ and the composite null diagnostic $\{S_{n},ε\}$ for the Tsallis holographic dark energy models with interactions. We find that model parameters and the forms of interaction will influence the values of diagnostic parameters or the trends of the evolutionary trajectories for each model. Moreover, the statefinder hierarchy $S_{3}^{(1)}$ together with $\{S_{3}^{(1)},ε\}$ could give good diagnostic results. Furthermore, we also obtain some issues of cosmological structure by means of the composite null diagnostic.
description: 10 pages,6 figures
Analysis of urban expansion and transportation characteristics
Creators: Yin, Lina
Publisher: name: Columbia University
Year: 2017
Subjects: Cities and towns--Growth--Planning
Urban transportation
City planning

description: Urban expansion and transportation are actually interrelated. Shanghai’s rapid urban expansion was caused by the inflow of people and the relocation of employment, which increased people’s travel demand, particularly for long-distance and motorized travel, greatly from 1990s onward. Dynamic travel purposes increased non-commute trips as well as people’s travel rates. Thus, average daily trips rose sharply due to these combined effects. Based on results of statistical analyses, population and GDP are statistically significant factors that increase average daily trips, while the expansion of urban space is significantly related to the growth of private motorized car share in Shanghai.
People are working to increase transportation supply to fulfill travel demand by constructing more roads and promoting a well-designed public transportation system. However, the growth in demand has outpaced the increase in supply, as indicated by more congested roads, trains, and buses despite the significant increase in subway ridership.
The demand management strategy needs to be involved in the policy making process to manage not only the growth of motorization, but also the growth of urban spaces and population. More supply still induces new demand, and the demand will continue to grow unless it is managed.
title: On looking into words (and beyond)
title: Structures, Relations, Analyses
titleType: Subtitle
Creators: name: (:Unkn) Unknown
Publisher: name: Freie Universität Berlin
Year: 2017
Subjects: subject: 400 Sprache::410 Linguistik

description: On Looking into Words is a wide-ranging volume spanning current research into word structure and morphology, with a focus on historical linguistics and linguistic theory. The papers are offered as a tribute to Stephen R. Anderson, the Dorothy R. Diebold Professor of Linguistics at Yale, who is retiring at the end of the 2016-2017 academic year. The contributors are friends, colleagues, and former students of Professor Anderson, all important contributors to linguistics in their own right. As is typical for such volumes, the contributions span a variety of topics relating to the interests of the honorand. In this case, the central contributions that Anderson has made to so many areas of linguistics and cognitive science, drawing on synchronic and diachronic phenomena in diverse linguistic systems, are represented through the papers in the volume. The 26 papers that constitute this volume are unified by their discussion of the interplay between synchrony and diachrony, theory and empirical results, and the role of diachronic evidence in understanding the nature of language. Central concerns of the volume include morphological gaps, learnability, increases and declines in productivity, and the interaction of different components of the grammar. The papers deal with a range of linked synchronic and diachronic topics in phonology, morphology, and syntax (in particular, cliticization), and their implications for linguistic theory.
High-temperature Expansions and Message Passing Algorithms
Creators: name: Maillard, Antoine
name: Foini, Laura
name: Castellanos, Alejandro Lage
name: Krzakala, Florent
name: Mézard, Marc
name: Zdeborová, Lenka
Publisher: name: arXiv
Year: 2019
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Information Theory (cs.IT)
subject: Probability (math.PR)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences
subject: FOS: Mathematics

description: Improved mean-field technics are a central theme of statistical physics methods applied to inference and learning. We revisit here some of these methods using high-temperature expansions for disordered systems initiated by Plefka, Georges and Yedidia. We derive the Gibbs free entropy and the subsequent self-consistent equations for a generic class of statistical models with correlated matrices and show in particular that many classical approximation schemes, such as adaptive TAP, Expectation-Consistency, or the approximations behind the Vector Approximate Message Passing algorithm all rely on the same assumptions, that are also at the heart of high-temperature expansions. We focus on the case of rotationally invariant random coupling matrices in the `high-dimensional' limit in which the number of samples and the dimension are both large, but with a fixed ratio. This encapsulates many widely studied models, such as Restricted Boltzmann Machines or Generalized Linear Models with correlated data matrices. In this general setting, we show that all the approximation schemes described before are equivalent, and we conjecture that they are exact in the thermodynamic limit in the replica symmetric phases. We achieve this conclusion by resummation of the infinite perturbation series, which generalizes a seminal result of Parisi and Potters. A rigorous derivation of this conjecture is an interesting mathematical challenge. On the way to these conclusions, we uncover several diagrammatical results in connection with free probability and random matrix theory, that are interesting independently of the rest of our work.
description: 59 pages, updated version matching the version published in J. Stat. Mech. Correction of typos in the last version
Stachyris nigricollis
Creators: name: Paperna, Ilan
name: Keong, Malcolm Soh Chu
name: May, Charlotte Yap Aye
Publisher: name: Zenodo
Year: 2008
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Aves
Passeriformes
Timaliidae
Stachyris
Stachyris nigricollis

description: Stachyris nigricollis (Temm.)
 Locality. – Malaysia: Fraser’s Hil, Aug. and Nov.2002.
 Description. – The observed gametocytes are slender, extend throughout the length of the erythrocyte with the side facing the host nucleus being curled (undulated) and only the tips touching the nucleus. Uninfected erythrocytes are 10.5 ± 0.65 × 6.4 ± 0.21 in size, with 5.4 ± 0.36 × 2.4 ± 0.27 nuclear size. The macrogametocyte-infected erythrocytes are 10.5–12.8 × 5.3– 5.9 in size, their nuclei 4.9–5.7 × 2.0– 3.5 in size, and not or only lightly displaced: NDR = 0.71–0.94. Macrogametocytes (n = 3) are 13.2–15.4 (cross 11.6–12.8) long, 1.8–2.4 wide (n = 3), the nuclei 2.2–3.2 × 1.5–1.7 in size, are submedian. The microgametocyteinfected erythrocytes are 12.1 ± 0.91 × 6.1 ± 0.57 in size; their nuclei 5.5 ± 0.20 × 2.0 ± 0.16 in size and only in some cases is lightly displaced: NDR 0.64–1.0 (0.82 ± 0.12). The microgametocytes (n = 5) are 14.5 ± 1.18 (cross 11.7 ± 0.67) long and 2 ± 0.14 wide.
 Etymology. – Named for the slender shape of the gametocytes.
 Remarks. – There are only a few known species of Haemoproteus which retain slender gametocytes at maturity. None of such species of Hae. balearicae Peirce, 1973, of cranes, Hae. contortus Bennett, 1979, of waders and Hae. nisi Peirce & Marquiss, 1983, of hawks and buzzards, might be affiliated with the presently described species. It is however not beyond a doubt that these gametocytes are not fully mature.
description: Published as part of Paperna, Ilan, Keong, Malcolm Soh Chu & May, Charlotte Yap Aye, 2008, Haemosporozoan Parasites Found In Birds In Peninsular Malaysia, Singapore, Sarawak And Java, pp. 211-243 in Raffles Bulletin of Zoology 56 (2) on page 234, DOI: 10.5281/zenodo.5340123
MOESM3 of A GH51 α-l-arabinofuranosidase from Talaromyces leycettanus strain JCM12802 that selectively drives synergistic lignocellulose hydrolysis
Creators: name: Tu, Tao
name: Li, Xiaoli
name: Meng, Kun
name: Bai, Yingguo
name: Wang, Yuan
name: Wang, Zhenxing
name: Yao, Bin
name: Luo, Huiying
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Physiology
subject: Pharmacology
subject: Evolutionary Biology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Additional file 3. Time course of hydrolysis of sodium hydroxide pretreated cornstalk by simultaneously addition of TcXyn10A and TlAbf51 at activity ratio of 1:5 (0.5 U and 2.5 U). 1, the oligosaccharides standards; 2–7, the hydrolysate with enzyme treatment for 3 h, 6 h, 9 h, 12 h, 24 h and 36 h, respectively.
Picard-Fuchs Equations, Hauptmoduls and Integrable Systems
Creators: name: Harnad, J.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Exactly Solvable and Integrable Systems (nlin.SI)
subject: High Energy Physics - Theory (hep-th)
subject: Mathematical Physics (math-ph)
subject: Algebraic Geometry (math.AG)
subject: Group Theory (math.GR)
subject: Number Theory (math.NT)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: The Schwarzian equations satisfied by certain Hauptmoduls (i.e., uniformizing functions for Riemann surfaces of genus zero) are derived from the Picard-Fuchs equations for families of elliptic curves and associated surfaces. The inhomogeneous Picard-Fuchs equations associated to elliptic integrals with varying endpoints are derived and used to determine solutions of equations that are algebraically related to a class of Painlevé VI equations.
description: PlainTeX 15gs. Write - up of lecture given at international meeting: Integrability: Seiberg-Witten and Witham Equations, ICMS, Edinburgh, September 14-19, 1998
Additional file 6: of Stock identification of minor carp, Cirrhinus reba, Hamilton 1822 through landmark-based morphometric and meristic variations
Creators: name: Rokhsana Ethin
name: Md Hossain
name: Animesh Roy
name: Rutegwa, Marcellin
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology

description: Table S4. Pooled within-groups correlations between discriminating variables and standardized canonical discriminant functions based on morphometric measurement (variables ordered by absolute size of correlation within function, *denotes the largest absolute correlation between each variable and any discriminant functions).Â (DOCX 15 kb)
Microchelonus (Mirochelonus) subcontractus
Creators: name: Aydogdu, M.
name: Beyarslan, A.
Publisher: name: Zenodo
Year: 2006
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Braconidae
Microchelonus
Microchelonus subcontractus

description: Microchelonus (Mirochelonus) subcontractus (ABDINBEKOVA 1971)
M a t e r i a l e x a m i n e d: Canakkale-Eceabat-Conkbayiri, pasture, 65m, 06.05.1993, 13; Edirne-Iskenderkoy, pasture, 41m, 28.05.1993, 2♀♀, 13; Lalapasa-Dogankoy, mixed forests, 370m, 06.06.1987, 333; Kirklareli-Demirkoy-Boztas, mixed forests, 350m, 06.07.1997, 13; Karabuk-Eskipazar-Ortakoy, pasture, 870m, 28.08.2002, 13; Samsun-Vezirkopru-Incesu, pasture, 240m, 28.08.2003, 633; Sinop-Boyabat-Yabanli, vegatable garden, 900m, 07.09.2001, 2♀♀, 1533; Tekirdag-Hayrabolu, trefoil, 90m, 26.07.2000, 13; Isıklar, pasture, 210m, 24.08.2000, 13.
D i s t r i b u t i o n i n T u r k e y: Edirne, Gaziantep, Icel, Kirklareli (BEYARSLAN 1995), Western Blacksea regions (first record).
G e n e r a l D i s t r i b u t i o n: Hungary, Mongolia, Turkey.
 H o s t s: Parasitoid of lepidopterans Vulcaniella extremella W. (Cosmopterygidae); Elachista sp. (Elachistidae).
description: Published as part of Aydogdu, M. & Beyarslan, A., 2006, Microchelonus SZÉPLIGETI 1908 (Hymenoptera: Braconidae: Cheloninae) species from the Marmara, Western and Blacksea regions of Turkey, pp. 397-407 in Linzer biologische Beiträge 38 (1) on page 403, DOI: 10.5281/zenodo.5433329
MOESM4 of A GH51 α-l-arabinofuranosidase from Talaromyces leycettanus strain JCM12802 that selectively drives synergistic lignocellulose hydrolysis
Creators: name: Tu, Tao
name: Li, Xiaoli
name: Meng, Kun
name: Bai, Yingguo
name: Wang, Yuan
name: Wang, Zhenxing
name: Yao, Bin
name: Luo, Huiying
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Physiology
subject: Pharmacology
subject: Biotechnology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Computational Biology

description: Additional file 4. Time course of hydrolysis of sodium hydroxide pretreated corn bran by simultaneously addition of TcXyn10A and TlAbf51 at activity ratio of 1:5 (0.5 U and 2.5 U). 1, the oligosaccharides standards; 2–7, the hydrolysate with enzyme treatment for 3 h, 6 h, 9 h, 12 h, 24 h and 36 h, respectively.
Beyond Hd: Evaluating Performance and Compatibility of Hevc And Av1 For 8k Uhd Video
Creators: name: Mei, Ling Wang
Publisher: name: ASEJ journals
Year: 2024
Subjects: 8K UHD Video, Video Coding Standards, HEVC, AV1, Video Compression Performance

description: 8K UHD video, with its remarkable resolution and quality, has found applications in diverse domains, including entertainment, education, healthcare, security, and sports. Nevertheless, the demands it imposes on data, computation, and video coding quality are substantial. Video coding, the process of compressing and decompressing video data for efficient storage and transmission, faces formidable challenges due to the massive data size, complexity, and quality requirements inherent in 8K UHD video. This paper delves into the intricacies of video coding for 8K UHD video, focusing on two prominent standards: HEVC and AV1. HEVC, an international standard introduced in 2013, has doubled video data compression efficiency compared to its predecessor. In contrast, AV1, an open-source standard developed in 2018, surpasses HEVC by achieving a 30% higher compression rate. This research aims to address the following question: How do HEVC and AV1 measure up in terms of performance, complexity, and compatibility for 8K UHD video coding? The paper's thesis contends that AV1 outperforms HEVC in terms of performance and compatibility, but HEVC remains more accessible and user-friendly for 8K UHD video coding
Evolutionary prisoner's dilemma games with optional participation
Creators: name: Szabo, Gyorgy
name: Hauert, Christoph
Publisher: name: arXiv
Year: 2002
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: Competition among cooperators, defectors, and loners is studied in an evolutionary prisoner's dilemma game with optional participation. Loners are risk averse i.e. unwilling to participate and rather rely on small but fixed earnings. This results in a rock-scissors-paper type cyclic dominance of the three strategies. The players are located either on square lattices or random regular graphs with the same connectivity. Occasionally, every player reassesses its strategy by sampling the payoffs in its neighborhood. The loner strategy efficiently prevents successful spreading of selfish, defective behavior and avoids deadlocks in states of mutual defection. On square lattices, Monte Carlo simulations reveal self-organizing patterns driven by the cyclic dominance, whereas on random regular graphs different types of oscillatory behavior are observed: the temptation to defect determines whether damped, periodic or increasing oscillations occur. These results are compared to predictions by pair approximation. Although pair approximation is incapable of distinguishing the two scenarios because of the equal connectivity, the average frequencies as well as the oscillations on random regular graphs are well reproduced.
description: 6 pages, 7 figures
MOESM7 of An automated homology-based approach for identifying transposable elements
Creators: name: Kennedy, Ryan
name: Unger, Maria
name: Christley, Scott
name: Collins, Frank
name: Madey, Gregory
Publisher: name: figshare
Year: 2011
Subjects: subject: Space Science
subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Plant Biology

description: Authorsâ original file for figure 3
Analytic Methods in Concrete Complexity
Creators: Tan, Li-Yang
Publisher: name: Columbia University
Year: 2014
Subjects: Computer science

description: This thesis studies computational complexity in concrete models of computation. We draw on a range of mathematical tools to understand the structure of Boolean functions, with analytic methods — Fourier analysis, probability theory, and approximation theory — playing a central role. These structural theorems are leveraged to obtain new computational results, both algorithmic upper bounds and complexity-theoretic lower bounds, in property testing, learning theory, and circuit complexity. We establish the best-known upper and lower bounds on the classical problem of testing whether an unknown Boolean function is monotone. We prove an Ω ̃(n^1/5) lower bound on the query complexity of non- adaptive testers, an exponential improvement over the previous lower bound of Ω(logn) from 2002. We complement this with an O ̃(n^5/6)-query non-adaptive algorithm for the problem. We characterize the statistical query complexity of agnostically learning Boolean functions with respect to product distributions. We show that l_1-approximability by low- degree polynomials, known to be sufficient for efficient learning in this setting, is in fact necessary. As an application we establish an optimal lower bound showing that no statistical query algorithm can efficiently agnostically learn monotone k-juntas for any k = ω(1) and any constant error less than 1/2. We initiate a systematic study of the tradeoffs be- tween accuracy and efficiency in Boolean circuit complexity, focusing on disjunctive normal form formulas, among the most basic types of circuits. A conceptual message that emerges is that the landscape of circuit complexity changes dramatically, both qualitatively and quantitatively, when the formula is only required to approximate a function rather than compute it exactly. Finally we consider the Fourier Entropy-Influence Conjecture, a long- standing open problem in the analysis of Boolean functions with significant applications in learning theory, the theory of pseudorandomness, and random graph theory. We prove a composition theorem for the conjecture, broadly expanding the class of functions for which the conjecture is known to be true.
Satellites of Satellites: The Case for Carina and Fornax
Creators: name: Pardy, Stephen A.
name: D'Onghia, Elena
name: Navarro, Julio
name: Grand, Robert
name: Gomez, Facundo A.
name: Marinacci, Federico
name: Pakmor, Rudiger
name: Simpson, Christine
name: Springel, Volker
Publisher: name: arXiv
Year: 2019
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We use the Auriga cosmological simulations of Milky Way (MW)-mass galaxies and their surroundings to study the satellite populations of dwarf galaxies in $Λ$CDM. As expected from prior work, the number of satellites above a fixed stellar mass is a strong function of the mass of the primary dwarf. For galaxies as luminous as the Large Magellanic Cloud (LMC), and for halos as massive as expected for the LMC (determined by its rotation speed), the simulations predict about 3 satellites with stellar masses exceeding $M_*>10^5\, M_\odot$. If the LMC is on its first pericentric passage, then these satellites should be near the LMC and should have orbital angular momenta roughly coincident with that of the LMC. We use 3D positions and velocities from the 2nd data release of the Gaia mission to revisit which of the "classical" MW dwarf spheroidals could plausibly be LMC satellites. The new proper motions of the Fornax and Carina dwarf spheroidals place them on orbits closely aligned with the orbital plane of the Magellanic Clouds, hinting at a potential Magellanic association. Together with the Small Magellanic Cloud (SMC), this result raises to $3$ the number of LMC satellites with $M_*>10^5\, M_\odot$, as expected from simulations. This also fills the 12-mag luminosity gap between the SMC and the ultra-faints Hyi1, Car2, Hor1, and Car3, the few ultra-faint satellites confirmed to have orbits consistent with a Magellanic origin.
description: 7 pages, 3 figures. Accepted for publication in the Monthly Notices of the Royal Astronomical Society