cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 3: of Changes in the Arabidopsis RNA-binding proteome reveal novel stress response mechanisms
Creators: name: Marondedze, Claudius
name: Thomas, Ludivine
name: Gehring, Chris
name: Lilley, Kathryn
Publisher: name: figshare
Year: 2019
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Computational Biology

description: Classical and non-classical RNA-binding domains in Arabidopsis thaliana drought stress responsive RBPs mined using pfam database. (A) Most represented classical RNA-binding domains. (B) Most represented non-classical RNA-binding domains. Bars in blue represent number of protein domains mined from differentially expressed drought responsive proteins compared to domains present in drought responsive time specific proteins in red. (PDF 33 kb)
String theoretic axion coupling and the evolution of cosmic structures
Creators: name: Choi, Kiwoon
name: Hwang, Jai-chan
name: Hwang, Kyu Wan
Publisher: name: arXiv
Year: 1999
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Astrophysics (astro-ph)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We examine the effects of the axion coupling to $R\tilde{R}$ on the evolution of cosmic structures. It is shown that the evolutions of the scalar- and vector-type perturbations are not affected by this axion coupling. However the axion coupling causes an asymmetric evolution of the two polarization states of the tensor-type perturbation, which may lead to a sizable polarization asymmetry in the cosmological gravitational wave if inflation involves a period in which the axion coupling is important. The polarization asymmetry produced during inflation are conserved over the subsequent evolution as long as the scales remain in the large-scale limit, and thus this may lead to an observable trace in the cosmic microwave background radiation.
description: 10 pages, REVtex
MOESM1 of Zero-valent iron sand filtration reduces concentrations of virus-like particles and modifies virome community composition in reclaimed water used for agricultural irrigation
Creators: name: Chopyk, Jessica
name: Prachi Kulkarni
name: Nasko, Daniel
name: Rhodel Bradshaw
name: Kalmia Kniel
name: Chiu, Pei
name: Manan Sharma
name: Sapkota, Amy
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Additional file 1: Table S1. Sequencing statistics for viral metagenomic samples. Table S2. Viral metagenomic contigs assigned taxonomy.
Additional file 1 of Differences of survival benefits brought by various treatments in ovarian cancer patients with different tumor stages
Creators: name: He, Tingshan
name: Li, Hong
name: Zhang, Zhiqiao
Publisher: name: figshare
Year: 2023
Subjects: subject: Ecology
subject: FOS: Biological sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Science Policy

description: Additional file 1.
Strongly linked current flow in polycrystalline forms of the new superconductor MgB2
Creators: name: Larbalestier, D. C.
name: Rikel, M. O.
name: Cooley, L. D.
name: Polyanskii, A. A.
name: Jiang, J. Y.
name: Patnaik, S.
name: Cai, X. Y.
name: Feldmann, D. M.
name: Gurevich, A.
name: Squitieri, A. A.
name: Naus, M. T.
name: Eom, C. B.
name: Hellstrom, E. E.
name: Cava, R. J.
name: Regan, K. A.
name: Rogado, N.
name: Hayward, M. A.
name: He, T.
name: Slusky, J. S.
name: Khalifah, P.
name: Inumaru, K.
name: Haas, M.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: The discovery of superconductivity at 39 K in MgB2[1] raises many issues. One of the central questions is whether this new superconductor resembles a high-temperature-cuprate superconductor or a low-temperature metallic superconductor in terms of its current carrying characteristics in applied magnetic fields. In spite of the very high transition temperatures of the cuprate superconductors, their performance in magnetic fields has several drawbacks[2]. Their large anisotropy restricts high bulk current densities to much less than the full magnetic field-temperature (H-T) space over which superconductivity is found. Further, weak coupling across grain boundaries makes transport current densities in untextured polycrystalline forms low and strongly magnetic field sensitive[3,4]. These studies of MgB2 address both issues. In spite of the multi-phase, untextured, nano-scale sub-divided nature of our samples, supercurrents flow throughout without the strong sensitivity to weak magnetic fields characteristic of Josephson-coupled grains[3]. Magnetization measurements over nearly all of the superconducting H-T plane show good temperature scaling of the flux pinning force, suggestive of a current density determined by flux pinning. At least two length scales are suggested by the magnetization and magneto optical (MO) analysis but the cause of this seems to be phase inhomogeneity, porosity, and minority insulating phase such as MgO rather than by weakly coupled grain boundaries. Our results suggest that polycrystalline ceramics of this new class of superconductor will not be compromised by the weak link problems of the high temperature superconductors, a conclusion with enormous significance for applications if higher temperature analogs of this compound can be discovered.
Clibanarius longitarsus
Creators: name: Rahayu, Dwi Listyo
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Decapoda
Diogenidae
Clibanarius
Clibanarius longitarsus

description: Clibanarius longitarsus (De Haan, 1849)
(Fig. 1C, D)
 Pagurus longitarsus De Haan, 1849: 211, fig. 3 (type locality: Japan).
 Pagurus asper H. Milne Edwards, 1848: 62 (type locality: Indian Seas); Low & Rahayu, 2014: 393.
 Clibanarius longitarsus – Fize & Serène, 1955: 83, fig. 11, pl. 3, figs. 1, 7, 10, 13; Dechancé, 1964: 31, fig. 4; Rahayu & Forest, 1992: 762, figs. 4b, 5b, 6b; Rahayu, 1996: 336; McLaughlin et al., 2007: 119, unnumbered fig.
 Material examined. 1 female, 9.5 mm (ZRC 2021.0102), St John’s Island, 18 May 2011; 1 male, 4.8 mm, 2 females, 8.9–9.4 mm (ZRC 2021.0103), st. SW95, mouth of Sungei Besar, 01°25.0258′N 103°67.607′E, mudflat with mangrove, 26 October 2012.
 Colour in life. In general greenish brown or blackish brown with longitudinal bright blue stripe on the lateral faces of P2 and P3 (Fig. 1C, D). Haig & Ball (1988) and Rahayu (2003) gave descriptions of colouration and colour variation of this species.
 Distribution. Widely distributed in the Indo-West Pacific; intertidal.
 Remarks. Clibanarius longitarsus is commonly found in brackish waters, mudflat, and mangrove environments. In its habitat, this species is easily recognised by its bright blue longitudinal stripe on the pereopods.
description: Published as part of Rahayu, Dwi Listyo, 2022, Hermit crabs of Singapore (Crustacea: Decapoda: Anomura: Diogenidae, Paguridae), with description of two new species, pp. 329-363 in Raffles Bulletin of Zoology 70 on page 330, DOI: 10.26107/RBZ-2022-0017, http://zenodo.org/record/7174641
Additional file 1: of Associations of serum 25-hydroxyvitamin D with metabolic syndrome and its components in elderly men and women: the Korean Urban Rural Elderly cohort study
Creators: name: Lee, Su
name: Lee, Eun
name: Lee, Jung
name: Kim, Jong
name: Kim, Kwang
name: Rhee, Yumie
name: Kim, Hyeon
name: Yoosik Youm
name: Kim, Chang
Publisher: name: figshare
Year: 2019
Subjects: subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy
subject: Hematology
subject: Computational Biology

description: Multivariable-adjusted odds ratio of metabolic syndrome and its components according to serum 25(OH)D levels stratified by body mass index (BMI). (DOCX 22 kb)
Additional file 2: of Changes in the Arabidopsis RNA-binding proteome reveal novel stress response mechanisms
Creators: name: Marondedze, Claudius
name: Thomas, Ludivine
name: Gehring, Chris
name: Lilley, Kathryn
Publisher: name: figshare
Year: 2019
Subjects: subject: Biophysics
subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology

description: Proteins identified as responsive to polyethylene glycol treatment. (A) RNA binding protein (AT1G60650), (B) Rotamase CYP1 (AT4G38740), (C) SWIB/MDM2 domain protein (AT2G35605), (D) Calcium binding EF hand (At calmodulin like 4, AT2G41100), (E) Stress-inducible protein (AT1G62740). Total soluble protein changes are represented by the grey bars and RNA-binding protein or mRNA-interacting protein changes by the black bars. The asterisk represents significantly (pÂ
Can Quantum Cosmology Give Observational Consequences of Many-Worlds Quantum Theory?
Creators: name: Page, Don N.
Publisher: name: arXiv
Year: 2000
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: Although many people have thought that the difference between the Copenhagen and many-worlds versions of quantum theory was merely metaphysical, quantum cosmology may allow us to make a physical test to distinguish between them empirically. The difference between the two versions shows up when the various components of the wavefunction have different numbers of observers and observations. In the Copenhagen version, a random observation is selected from the sample within the component that is selected by wavefunction collapse, but in the many-worlds version, a random observation is selected from those in all components. Because of the difference in the samples, probable observations in one version can be very improbable in the other version.
description: LaTeX
Additional file 2 of Analysis of BAC end sequences in oak, a keystone forest tree species, providing insight into the composition of its genome
Creators: name: Rampant, Patricia Faivre
name: Lesur, Isabelle
name: Boussardon, Clément
name: Bitton, Frédérique
name: Marie-Laure Martin-Magniette
name: Bodénès, Catherine
name: Provost, Grégoire Le
name: Bergès, Hélène
name: Fluch, Sylvia
name: Kremer, Antoine
name: Plomion, Christophe
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 2:Screening of the Quercus robur BAC library with SSR markers. The file contains the number of amplification products obtained after PCR screening of the oak BAC library (7×) with SSR markers chosen along the 12 linkage group of the oak map, to assess the genome coverage of the BAC library. (PDF 222 KB)
Dardanus lagopodes
Creators: name: Rahayu, Dwi Listyo
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Decapoda
Diogenidae
Dardanus
Dardanus lagopodes

description: Dardanus lagopodes (Forskål, 1775)
(Fig. 2C, D)
 Cancer lagopodes Forskål, 1775: 93 (type locality: Red Sea).
 Pagurus sanguinolentus – Forest, 1953b: 559, 560, figs. 12–14 (in part); Fize & Serène, 1955: 166–173, fig. 25, pl. 4 no. 4–5 (in part) (Not Pagurus sanguinolentus Quoy & Gaimard, 1824).
 Pagurus affinis H. Milne Edwards, 1836: 274 (type locality: Sri Lanka).
 Pagurus euopsis Dana, 1852: 452, 453 (type locality: Upolu, Samoa); Estampador, 1937: 503 (in part).
 Dardanus lagopodes – Lewinsohn, 1969: 32, figs. 1, 2, pl. 2; Ball & Haig, 1972: 92, 93; Haig & Ball, 1988: 166; McLaughlin et al., 2007: 91–93, unumbered fig.; Malay et al., 2018: 39, figs. 3H, 5A, B.
 Material examined. 1 male, 14.9 mm (ZRC 2021.0106), Singapore Strait, 7 June 2013.
 Colour in life. Shield mottled grey and dark brown, large reddish brown blotch anteriorly; ocular peduncles whitish yellow, narrow orange line just next to corneas; cheliped brownish grey, fingers with tinge of dark red or dark brown. P2, P3 whitish yellow, carpi and meri with large blotch of dark brown on dorsal surface. All setae reddish brown with yellowish white tip (Fig. 2C, D).
 Distribution. Widely distributed in the Indo-West Pacific; intertidal to shallow subtidal on coral rubble bottom.
 Remarks. Malay et al. (2018) revised the status of the two forms of colour (black/blue/brown form and red form) long identified with D. lagopodes (e.g., Fize & Serène, 1955; Ball & Haig, 1972; Haig & Ball, 1988; McLaughlin et al., 2007), and determined that the black/blue/brown form represents the true D. lagopodes.
description: Published as part of Rahayu, Dwi Listyo, 2022, Hermit crabs of Singapore (Crustacea: Decapoda: Anomura: Diogenidae, Paguridae), with description of two new species, pp. 329-363 in Raffles Bulletin of Zoology 70 on page 332, DOI: 10.26107/RBZ-2022-0017, http://zenodo.org/record/7174641
Additional file 5 of Analysis of BAC end sequences in oak, a keystone forest tree species, providing insight into the composition of its genome
Creators: name: Rampant, Patricia Faivre
name: Lesur, Isabelle
name: Boussardon, Clément
name: Bitton, Frédérique
name: Marie-Laure Martin-Magniette
name: Bodénès, Catherine
name: Provost, Grégoire Le
name: Bergès, Hélène
name: Fluch, Sylvia
name: Kremer, Antoine
name: Plomion, Christophe
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 5:Frequencies of simple sequence repeats (SSR) in BESs from several plant species. (PDF 222 KB)
Talk2Hand: Knowledge Board Interaction in Augmented Reality Easing Analysis with Machine Learning Assistants
Creators: name: Hong, Yu-Lun
name: Watson, Benjamin
name: Thompson, Kenneth
name: Paul, Davis
Publisher: name: The Eurographics Association
Year: 2021
Subjects: Human centered computing
Visual analytics
Mixed / augmented reality
Theory of computation
Semi
supervised learning

description: Analysts now often use machine learning (ML) assistants, but find them difficult to use, since most have little ML expertise. Talk2Hand improves the usability of ML assistants by supporting interaction with them using knowledge boards, which intuitively show association, visually aid human recall, and offer natural interaction that eases improvement of displayed associations and addition of new data into emerging models. Knowledge boards are familiar to most and studied by analytics researchers, but not in wide use, because of their large size and the challenges of using them for several projects simultaneously. Talk2Hand uses augmented reality to address these shortcomings, overlaying large but virtual knowledge boards onto typical analyst offices, and enabling analysts to switch easily between different knowledge boards. This paper describes our Talk2Hand prototype.
description: EuroVis Workshop on Visual Analytics (EuroVA)
description: Immersive Analytics and Interaction
description: 1
description: 5
description: Yu-Lun Hong, Benjamin Watson, Kenneth Thompson, and Davis Paul
description: CCS Concepts: Human-centered computing --> Visual analytics; Mixed / augmented reality; Theory of computation --> Semi-supervised learning
Immersive 3D Visualization of Multi-Modal Brain Connectivity
Creators: name: Pester, Britta
name: Winke, Oliver
name: Ligges, Carolin
name: Dachselt, Raimund
name: Gumhold, Stefan
Publisher: name: The Eurographics Association
Year: 2021

description: In neuroscience, the investigation of connectivity between different brain regions suffers from the lack of adequate solutions for visualizing detected networks. One reason is the high number of dimensions that have to be combined within the same view: neuroscientists examine brain connectivity in its natural spatial context across the additional dimensions time and frequency. To combine all these dimensions without prior merging or filtering steps, we propose a visualization in virtual reality to realize multiple coordinated views of the networks in a virtual visual analysis lab. We implemented a prototype of the new idea. In a first qualitative user study we included experts in the field of computer science, psychology as well as neuroscience. Time series of electroencephalography recordings evoked by visual stimuli were used to provide a first proof of concept trial.The positive user feedback shows that our application successfully fills a gap in the visualization of high-dimensional brain networks.
description: EuroVis Workshop on Visual Analytics (EuroVA)
description: Immersive Analytics and Interaction
description: 7
description: 11
description: Britta Pester, Oliver Winke, Carolin Ligges, Raimund Dachselt, and Stefan Gumhold
Dardanus megistos
Creators: name: Rahayu, Dwi Listyo
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Decapoda
Diogenidae
Dardanus
Dardanus megistos

description: Dardanus megistos (Herbst, 1804)
(Fig. 2E)
 Cancer megistos Herbst, 1804: 23, pl. 61, fig. 1 (type locality unknown).
 Pagurus megistos; Fize & Serène, 1955: 160, fig. 24, pl. 4A, figs. 1–3.
 Dardanus megistos; Rahayu, 1996: 339; McLaughlin et al., 2007: 94, unnumbered fig.; Malay et al., 2018: 51, fig. 4C.
 Material examined. 1 specimen (not preserved), St. John’s Island, 2013.
 Colour in life. Shield, abdomen, and appendages orangish red or bright red with white spots. Ocular peduncles bright red, narrow white band at base of corneas; corneas brownish red; antennal and antennular peduncles orange, antennal flagella white.
 Distribution. Widely distributed in the Indo-West Pacific; intertidal, sandy muddy substrate.
 Remarks. The species is easily recognised by the orangish red colour with white spots on the shield and appendages. This is a common species in the Indo-West Pacific, but rarely collected in Singapore.
description: Published as part of Rahayu, Dwi Listyo, 2022, Hermit crabs of Singapore (Crustacea: Decapoda: Anomura: Diogenidae, Paguridae), with description of two new species, pp. 329-363 in Raffles Bulletin of Zoology 70 on page 332, DOI: 10.26107/RBZ-2022-0017, http://zenodo.org/record/7174641
Immersive Analytics of Heterogeneous Biological Data Informed through Need-finding Interviews
Creators: name: Ripken, Christine
name: Tusk, Sebastian
name: Tominski, Christian
Publisher: name: The Eurographics Association
Year: 2021
Subjects: Human centered computing
Visual analytics
Computing methodologies
Virtual reality

description: The goal of this work is to improve existing biological analysis processes by means of immersive analytics. In a first step, we conducted need-finding interviews with 12 expert biologists to understand the limits of current practices and identify the requirements for an enhanced immersive analysis. Based on the gained insights, a novel immersive analytics solution is being developed that enables biologists to explore highly interrelated biological data, including genomes, transcriptomes, and phenomes. We use an abstract tabular representation of heterogeneous data projected onto a curved virtual wall. Several visual and interactive mechanisms are offered to allow biologists to get an overview of large data, to access details and additional information on the fly, to compare selected parts of the data, and to navigate up to about 5 million data values in real-time. Although a formal user evaluation is still pending, initial feedback indicates that our solution can be useful to expert biologists.
description: EuroVis Workshop on Visual Analytics (EuroVA)
description: Immersive Analytics and Interaction
description: 13
description: 17
description: Christine Ripken, Sebastian Tusk, and Christian Tominski
description: CCS Concepts: Human-centered computing --> Visual analytics; Computing methodologies --> Virtual reality
Adversarial Samples on Android Malware Detection Systems for IoT Systems
Creators: name: Liu, Xiaolei
name: Du, Xiaojiang
name: Zhang, Xiaosong
name: Zhu, Qingxin
name: Guizani, Mohsen
Publisher: name: arXiv
Year: 2019
Subjects: subject: Cryptography and Security (cs.CR)
subject: Machine Learning (cs.LG)
subject: FOS: Computer and information sciences

description: Many IoT(Internet of Things) systems run Android systems or Android-like systems. With the continuous development of machine learning algorithms, the learning-based Android malware detection system for IoT devices has gradually increased. However, these learning-based detection models are often vulnerable to adversarial samples. An automated testing framework is needed to help these learning-based malware detection systems for IoT devices perform security analysis. The current methods of generating adversarial samples mostly require training parameters of models and most of the methods are aimed at image data. To solve this problem, we propose a \textbf{t}esting framework for \textbf{l}earning-based \textbf{A}ndroid \textbf{m}alware \textbf{d}etection systems(TLAMD) for IoT Devices. The key challenge is how to construct a suitable fitness function to generate an effective adversarial sample without affecting the features of the application. By introducing genetic algorithms and some technical improvements, our test framework can generate adversarial samples for the IoT Android Application with a success rate of nearly 100\% and can perform black-box testing on the system.
Lessons learned while supporting Cyber Situational Awareness
Creators: name: Blasilli, Graziano
name: Paoli, Emiliano De
name: Lenti, Simone
name: Picca, Sergio
Publisher: name: The Eurographics Association
Year: 2021
Subjects: Human centered computing
Visual analytics
Security and privacy
Network security

description: The increasing number of cyberattacks against critical infrastructures has pushed researchers to develop many Visual Analytics solutions to provide valid defensive approaches and improve the situational awareness of the security operators. Applying such solutions to complex infrastructures is often challenging, and existing tools can present limitations and exhibit various issues. In this paper, supported by cybersecurity experts of a world leader company in the military domain, we apply an existing Visual Analytics solution, MAD, to a complex network of a critical infrastructure, highlighting its limitations in this scenario and proposing further solutions to improve the cyber situational awareness in both proactive and reactive risk analyses. The results of this research contribute to characterize the activities performed by domain experts in this domain and their implications for the design of Visual Analytics solutions that aim at supporting them.
description: EuroVis Workshop on Visual Analytics (EuroVA)
description: VA Applications and Workflows
description: 19
description: 23
description: Graziano Blasilli, Emiliano De Paoli, Simone Lenti, and Sergio Picca
description: CCS Concepts: Human-centered computing --> Visual analytics; Security and privacy --> Network security
Pion condensation in a soft-wall AdS/QCD model
Creators: name: Lv, Meng
name: Li, Danning
name: He, Song
Publisher: name: arXiv
Year: 2018
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Finite isospin chemical potential $μ_I$ and temperature $T$ have been introduced in the framework of soft-wall AdS/QCD model. By self-consistently solve the equation of motion, we obtain the phase boundary of pion condensation phase, across which the system undergoes a phase transition between pion condensation phase and normal phase. Comparing the free energy of solutions with and without pion condensation, we find that the phase transition is of first order type both at large $μ_I$ and small $μ_I$. Qualitatively, the behavior at large $μ_I$ is in agreement with the lattice simulation in Phys.Rev.D66(2002)034505, while the behavior at small $μ_I$ is different from lattice simulations and previous studies in hard wall AdS/QCD model. This indicates that a full back-reaction model including the interaction of gluo-dynamics and chiral dynamics might be necessary to describe the small $μ_I$ pion condensation phase. This study could provide certain clues to build a more realistic holographic model.
description: Regular article, 21 pages
Chiasmia paucimacula Kr
Creators: name: Mbata, Keith J.
name: Prins, Jurate De
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Geometridae
Chiasmia
Chiasmia paucimacula

description: Chiasmia paucimacula Kr ̡ger, 2001
COMMON NAME(S): Geometer moth.
SYNONYM(S): None.
IUCN STATUS: Not Evaluated (NE).
DISTRIBUTION: Cameroon, Democratic Republic of Congo, Ethiopia, Malawi, Mozambique, Nigeria, South Africa, Tanzania, Uganda, Zambia, Zimbabwe.
LOCALITY IN ZAMBIA: Lusaka, in Lusaka Province; Serenje, in Central Province; Isoka, in Muchinga Province.
LARVAL HOSTPLANT(S): Unknown.
SOURCES: De Prins & De Prins 2022; Kŗger 2001.
description: Published as part of Mbata, Keith J. & Prins, Jurate De, 2023, Annotated checklist of moths of Zambia (Insecta: Lepidoptera), pp. 1-503 in Zootaxa 5354 (1) on page 212, DOI: 10.11646/zootaxa.5354.1.1, http://zenodo.org/record/10130434
Diogenes planimanus Henderson 1893
Creators: name: Rahayu, Dwi Listyo
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Decapoda
Diogenidae
Diogenes
Diogenes planimanus

description: Diogenes planimanus Henderson, 1893
(Figs. 3C, D, 4B)
 Diogenes planimanus Henderson, 1893: 416, pl. 39, figs. 5, 6 (type locality: Madras, India); Tirmizi & Siddiqui, 1982: 43, figs. 21, 22; Rahayu, 1996: 345, fig. 3; McLaughlin & Clark, 1997: 40, figs. 4a, 9c, e, 12a; McLaughlin, 2002a: 422, fig. 5A–C; Siddiqui, Kazmi & McLaughlin, 2004: 164, figs. 3, 4.
 Material examined. 3 males, 4.0– 6.7 mm, 1 female, 6.7 mm (ZRC 2021.0112), Red Cliff shoal area, Changi, 27 April 1982; 1 male, 8.44 mm (ZRC 2021.0113), Kranji Reservoir park, 1°26.27.9′N 103°44.16.26′E, 4 July 2009.
 Distribution. Northern Arabian Sea, Bay of Bengal, Andaman Sea, Singapore, Malaysia, Gulf of Thailand, and northern Australia; intertidal to 7 m, inhabits sandy mud substrate.
 Remarks. In having a shield that is denticulate over the entire length of its anterior margin, a weakly bifurcated antennal acicle, tuberculation of the chelipeds, the covering of tubercles on the lateral faces of the propodi, carpi, and meri, and the rows of spines on the dorsal surface of propodi and carpi of P2 and P3 (Fig. 3D), the present specimens agree well with the lectotype of D. planimanus redescribed by McLaughlin & Clark (1997) and specimens from Pakistan examined by Siddiqui et al. (2004). They differ from the lectotype in having only one spine on each side of the intercalary rostriform process (two or five spines on each side in the lectotype). Rahayu (1996), McLaughlin & Clark (1997), and Siddiqui et al. (2004) mentioned the presence of blunt or acute tubercles on the surface of the palm and fixed finger of the left cheliped. The tubercles on the outer surface of the palm and fixed finger of the left cheliped in the present specimens are more flattened, none of which are acute (Fig. 3C), however a prominent row of tubercles on the outer surface of the carpus of the left cheliped is clearly indicated (Fig. 3C).
description: Published as part of Rahayu, Dwi Listyo, 2022, Hermit crabs of Singapore (Crustacea: Decapoda: Anomura: Diogenidae, Paguridae), with description of two new species, pp. 329-363 in Raffles Bulletin of Zoology 70 on page 335, DOI: 10.26107/RBZ-2022-0017, http://zenodo.org/record/7174641
Relativistic Hydrodynamic Cosmological Perturbations
Creators: name: Hwang, J.
name: Noh, H.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Astrophysics (astro-ph)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: Relativistic cosmological perturbation analyses can be made based on several different fundamental gauge conditions. In the pressureless limit the variables in certain gauge conditions show the correct Newtonian behaviors. Considering the general curvature ($K$) and the cosmological constant ($Λ$) in the background medium, the perturbed density in the comoving gauge, and the perturbed velocity and the perturbed potential in the zero-shear gauge show the same behavior as the Newtonian ones in general scales. In the first part, we elaborate these Newtonian correspondences. In the second part, using the identified gauge-invariant variables with correct Newtonian correspondences, we present the relativistic results with general pressures in the background and perturbation. We present the general super-sound-horizon scale solutions of the above mentioned variables valid for general $K$, $Λ$, and generally evolving equation of state. We show that, for vanishing $K$, the super-sound-horizon scale evolution is characterised by a conserved variable which is the perturbed three-space curvature in the comoving gauge. We also present equations for the multi-component hydrodynamic situation and for the rotation and gravitational wave.
description: 16 pages, no figure, To appear in Gen. Rel. Grav
Using Nonlinear Response to Estimate the Strength of an Elastic Network
Creators: name: Gunaratne, Gemunu H.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Quantitative Biology (q-bio)
subject: FOS: Physical sciences
subject: FOS: Biological sciences

description: Disordered networks of fragile elastic elements have been proposed as a model of inner porous regions of large bones [Gunaratne et.al., cond-mat/0009221, http://xyz.lanl.gov]. It is shown that the ratio $Γ$ of responses of such a network to static and periodic strain can be used to estimate its ultimate (or breaking) stress. Since bone fracture in older adults results from the weakening of porous bone, we discuss the possibility of using $Γ$ as a non-invasive diagnostic of osteoporotic bone.
description: 4 pages, 4 figures
Diogenes singaporensis Rahayu 2015
Creators: name: Rahayu, Dwi Listyo
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Decapoda
Diogenidae
Diogenes
Diogenes singaporensis

description: Diogenes singaporensis Rahayu, 2015
 Diogenes singaporensis Rahayu, 2015: 186, figs. 3–6 (type locality: Singapore).
 Material examined. 1 male, 1.3 mm (ZRC 2021.0168), Changi, coll C.M. Yang, 18 January 1995; 1 ovigerous female, 1.6 mm (ZRC 2021.0169), Changi, coll. H. K. Lua, 16 February 1995; 7 males, 1.6–2.2 mm, 5 females, 1.3–1.6 mm, 1 ovigerous female, 1.8 mm (ZRC 2021.0170), Chek Jawa, Pulau Ubin, 21 September 2001; 11 males, 2.5–3.1 mm (MZB Cru 5208), Red cliff, shoal area Changi, 16 November 2008; 15 males, 1.8–3.1 mm, 1 female, 2.4 mm, 1 ovigerous female, 1.8 mm (MZB Cru 5209), Chek Jawa, 1 July 2009; 17 males (sl 1.3–2.5 mm), 8 ovigerous females, 1.45–1.8 mm (ZRC 2021.0171), st. S16, Chek Jawa, seagrass bed, sandflat, 7 March 2012; 1 male, 1.8 mm (ZRC 2021.0172), st. M18, Kampung Sungai Durian, nipah mangrove, 7 March 2012; 3 males, 1.3–1.6 mm (ZRC 2021.0173) st. SW53, Seringat Kias, 1°13.630′N 103°51.218′E, artificial lagoon, hand collecting, sandy beach, seagrass, 24 May 2013; 7 males, 1.1–3.1 mm, 4 females, 1.1–2.7 mm, 1 ovigerous female, 1.3 mm (ZRC 2021.0174), st. IT86, Cyrene Reef, 1°15.374′N 103°44.816′E, intertidal, 27 May 2013.
 Distribution. So far known only from Singapore; intertidal, on sandy substrate and seagrass bed.
description: Published as part of Rahayu, Dwi Listyo, 2022, Hermit crabs of Singapore (Crustacea: Decapoda: Anomura: Diogenidae, Paguridae), with description of two new species, pp. 329-363 in Raffles Bulletin of Zoology 70 on page 349, DOI: 10.26107/RBZ-2022-0017, http://zenodo.org/record/7174641
Improving performance of inverse Compton sources through laser chirping
Creators: name: Terzić, Balša
name: Krafft, Geoffrey
name: Brown, Aaron
name: Hagerman, Trenton
name: Johnson, Erik
name: Petrillo, Vittoria
name: Drebot, Illya
name: Maroli, Cesare
name: Ruijter, Marcel
Publisher: name: arXiv
Year: 2019
Subjects: subject: Accelerator Physics (physics.acc-ph)
subject: FOS: Physical sciences

description: We present a new paradigm for computation of radiation spectra in the non-linear regime of operation of inverse Compton sources characterized by high laser intensities. The resulting simulations show an unprecedented level of agreement with the experiments. Increasing the laser intensity changes the longitudinal velocity of the electrons during their collision, leading to considerable non-linear broadening in the scattered radiation spectra. The effects of such ponderomotive broadening are so deleterious that most inverse Compton sources either remain at low laser intensities or pay a steep price to operate at a small fraction of the physically possible peak spectral output. This ponderomotive broadening can be reduced by a suitable frequency modulation (also referred to as "chirping", which is not necessarily linear) of the incident laser pulse, thereby drastically increasing the peak spectral density. This frequency modulation, included in the new code as an optional functionality, is used in simulations to motivate the experimental implementation of this transformative technique.
description: 7 pages, 5 figures
On the migration and dispersal of the Cyprus wheatear Oenanthe cypriaca
Creators: name: Patchett, Robert Brian
Publisher: name: The University of St Andrews
Year: 2022
Subjects: subject: QL696.P288P2
subject: Wheatears--Cyprus
subject: Birds--Migration

description: The juvenile stage is likely to play a central role in the population dynamics of migratory animals, the evolution of migration, and a species’ capacity to adapt to change. But relatively little is known about the ontogeny of migration and dispersal. In this thesis I explored migration and dispersal across the full annual cycle in the Cyprus wheatear Oenanthe cyprica – a long-distance migrant landbird – focusing on how these movements develop with age and whether they might allow adaptation to environmental change. I investigated post-fledging dispersal, the possible role of female song in dispersal, the ontogeny of migration, post-migration dispersal, and seasonally different migration routes in the context of life history evolution. I found that the post-fledging period may function to locate a first breeding territory, but only in males; pre-migration exploratory dispersal thus may contribute to early breeding the following year. Female song occurred predominantly in the pre-breeding period and may be multifunctional but was used particularly in territorial defence and mate acquisition; it may be a relatively unappreciated way to deal with the more extreme time constraints of territory and mate acquisition in migrants. Juvenile migrations became more like those of adults within a single annual cycle, suggesting that improvement in migratory behaviour occurs rapidly. Juveniles appear to make a post-first-migration dispersal on the non-breeding grounds, suggesting capacity to cope with local-scale habitat shifts. Juveniles showed some flexibility in migration timing that may allow adaptation to advancing spring phenology. Finally, migrations were direct in autumn but detoured in spring, and may be shaped by regional wind patterns, suggesting potential for adjustment to future changes in wind conditions. Overall, these findings highlight the importance of improved efficiency of time and space use during the first-year stage in migrant birds.
Information Theoretic Bounds Based Channel Quantization Design for Emerging Memories
Creators: name: Mei, Zhen
name: Cai, Kui
name: Shi, Long
Publisher: name: arXiv
Year: 2018
Subjects: subject: Information Theory (cs.IT)
subject: FOS: Computer and information sciences

description: Channel output quantization plays a vital role in high-speed emerging memories such as the spin-torque transfer magnetic random access memory (STT-MRAM), where high-precision analog-to-digital converters (ADCs) are not applicable. In this paper, we investigate the design of the 1-bit quantizer which is highly suitable for practical applications. We first propose a quantized channel model for STT-MRAM. We then analyze various information theoretic bounds for the quantized channel, including the channel capacity, cutoff rate, and the Polyanskiy-Poor-Verdú (PPV) finite-length performance bound. By using these channel measurements as criteria, we design and optimize the 1-bit quantizer numerically for the STT-MRAM channel. Simulation results show that the proposed quantizers significantly outperform the conventional minimum mean-squared error (MMSE) based Lloyd-Max quantizer, and can approach the performance of the 1-bit quantizer optimized by error rate simulations.
description: This paper is accepted by ITW 2018
Customizable Coordination of Independent Visual Analytics Tools
Creators: name: Nonnemann, Lars
name: Hogräfer, Marius
name: Schumann, Heidrun
name: Urban, Bodo
name: Schulz, Hans-Jörg
Publisher: name: The Eurographics Association
Year: 2021
Subjects: Human centered computing
Visualization systems and tools
Information systems
Data exchange

description: While it is common to use multiple independent analysis tools in combination, it is still cumbersome to carry out a cross-tool visual analysis. Some dedicated frameworks addressing this issue exist, yet in order to use them, a Visual Analytics tool must support their API or architecture. In this paper, we do not rely on a single predetermined exchange mechanism for the whole ensemble of VA tools. Instead, we propose using any available channel for exchanging data between two subsequently used VA tools. This effectively allows to mix and match different data exchange strategies within one cross-tool analysis, which considerably reduces the overhead of adding a new VA tool to a given tool ensemble. We demonstrate our approach with a first implementation called AnyProc and its application to a use case of three VA tools in a Health IT data analysis scenario.
description: EuroVis Workshop on Visual Analytics (EuroVA)
description: VA Applications and Workflows
description: 25
description: 29
description: Lars Nonnemann, Marius Hogräfer, Heidrun Schumann, Bodo Urban, and Hans-Jörg Schulz
description: CCS Concepts: Human-centered computing --> Visualization systems and tools; Information systems --> Data exchange
Diogenes spinicarpus Rahayu & Forest 1995
Creators: name: Rahayu, Dwi Listyo
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Decapoda
Diogenidae
Diogenes
Diogenes spinicarpus

description: Diogenes spinicarpus Rahayu & Forest, 1995
 Diogenes spinicarpus Rahayu & Forest, 1995: 406, figs. 6a–f, 7a–h (type locality: Tanjung Tiram, Ambon, Indonesia).
 Material examined. 1 male, 1.6 mm (MZB Cru 5219), Pulau Hantu, dive, 7–10 m, 16 December 2012; 1 male, 1.3 mm (ZRC 2021.0219), st. SD143, east of Pulau Hantu, dive, 12 m, 13 May 2013; 1 male, 2.2 mm (ZRC 2021.0220), Pulau Semakau, near mangrove, 10 November 2011.
 Distribution. Indonesia, Singapore; 0–10 m, in sandy substrate.
 Remarks. Among the species of the Diogenes pallescens group, D. spinicarpus is recognisable by the short fourth segment of the antennal penduncles armed with a strong spine on the dorsodistal margin, the slender antennal acicles bearing two or three spines mesially, and the proximally inflated ocular peduncle with a similar dilated cornea. The specimens examined in this study agree well with the original description by Rahayu & Forest (1995) except for the right cheliped that has a prominent hiatus between dactyl and fixed finger. This species is recorded for the first time in Singapore waters.
description: Published as part of Rahayu, Dwi Listyo, 2022, Hermit crabs of Singapore (Crustacea: Decapoda: Anomura: Diogenidae, Paguridae), with description of two new species, pp. 329-363 in Raffles Bulletin of Zoology 70 on page 350, DOI: 10.26107/RBZ-2022-0017, http://zenodo.org/record/7174641
Richard's inequality, Cauchy-Schwarz's inequality and approximate solutions of Sincov's equation
Creators: name: Fechner, Włodzimierz
Publisher: name: arXiv
Year: 2019
Subjects: subject: Classical Analysis and ODEs (math.CA)
subject: FOS: Mathematics
subject: 26D15, 39B62, 39B82, 46C05

description: We observe a connection between Cauchy-Schwarz' and Richard's inequalities in inner product spaces and a Ulam-type stability problem for multiplicative Sincov's functional equation. We prove that this equation is super-stable for unbounded mappings, i.e. every unbounded approximate solution is an exact solution.
A Taxonomy of Attribute Scoring Functions
Creators: name: Schmid, Jenny
name: Bernard, Jürgen
Publisher: name: The Eurographics Association
Year: 2021

description: Shifting the analysis from items to the granularity of attributes is a promising approach to address complex decision-making problems. In this work, we study attribute scoring functions (ASFs), which transform values from data attributes to numerical scores. As the output of ASFs for different attributes is always comparable and scores carry user preferences, ASFs are particularly useful for analysis goals such as multi-attribute ranking, multi-criteria optimization, or similarity modeling. However, non-programmers cannot yet fully leverage their individual preferences on attribute values, as visual analytics (VA) support for the creation of ASFs is still in its infancy, and guidelines for the creation of ASFs are missing almost entirely. We present a taxonomy of eight types of ASFs and an overview of tools for the creation of ASFs as a result of an extensive literature review. Both the taxonomy and the tools overview have descriptive power, as they represent and combine non-visual math and statistics perspectives with the VA perspective. We underpin the usefulness of VA support for broader user groups in real-world cases for all eight types of ASFs, unveil missing VA support for the ASF creation, and discuss the integration of ASF in VA workflows.
description: EuroVis Workshop on Visual Analytics (EuroVA)
description: VA Applications and Workflows
description: 31
description: 35
description: Jenny Schmid and Jürgen Bernard
Alpha Entanglement Codes: Practical Erasure Codes to Archive Data in Unreliable Environments
Creators: name: Estrada-Galiñanes, Vero
name: Miller, Ethan
name: Felber, Pascal
name: Pâris, Jehan-François
Publisher: name: arXiv
Year: 2018
Subjects: subject: Distributed, Parallel, and Cluster Computing (cs.DC)
subject: Cryptography and Security (cs.CR)
subject: Information Theory (cs.IT)
subject: FOS: Computer and information sciences

description: Data centres that use consumer-grade disks drives and distributed peer-to-peer systems are unreliable environments to archive data without enough redundancy. Most redundancy schemes are not completely effective for providing high availability, durability and integrity in the long-term. We propose alpha entanglement codes, a mechanism that creates a virtual layer of highly interconnected storage devices to propagate redundant information across a large scale storage system. Our motivation is to design flexible and practical erasure codes with high fault-tolerance to improve data durability and availability even in catastrophic scenarios. By flexible and practical, we mean code settings that can be adapted to future requirements and practical implementations with reasonable trade-offs between security, resource usage and performance. The codes have three parameters. Alpha increases storage overhead linearly but increases the possible paths to recover data exponentially. Two other parameters increase fault-tolerance even further without the need of additional storage. As a result, an entangled storage system can provide high availability, durability and offer additional integrity: it is more difficult to modify data undetectably. We evaluate how several redundancy schemes perform in unreliable environments and show that alpha entanglement codes are flexible and practical codes. Remarkably, they excel at code locality, hence, they reduce repair costs and become less dependent on storage locations with poor availability. Our solution outperforms Reed-Solomon codes in many disaster recovery scenarios.
description: The publication has 12 pages and 13 figures. This work was partially supported by Swiss National Science Foundation SNSF Doc.Mobility 162014, 2018 48th Annual IEEE/IFIP International Conference on Dependable Systems and Networks (DSN)
Anharmonic Vibrational Eigenfunctions and Infrared Spectra from Semiclassical Molecular Dynamics
Creators: name: Micciarelli, Marco
name: Conte, Riccardo
name: Suarez, Jaime
name: Ceotto, Michele
Publisher: name: arXiv
Year: 2018
Subjects: subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: We describe a new approach based on semiclassical molecular dynamics that allows to simulate infrared absorption or emission spectra of molecular systems with inclusion of anharmonic intensities. This is achieved from semiclassical power spectra by computing first the vibrational eigenfunctions as a linear combination of harmonic states, and then the oscillator strengths associated to the vibrational transitions. We test the approach against a 1D Morse potential and apply it to the water molecule with results in excellent agreement with discrete variable representation quantum benchmarks. The method does not require any grid calculations and it is directly extendable to high dimensional systems. The usual exponential scaling of the basis set size with the dimensionality of the system can be avoided by means of an appropriate truncation scheme. Furthermore, the approach has the advantage to provide IR spectra beyond the harmonic approximation without losing the possibility of an intuitive assignment of absorption peaks in terms of normal modes of vibration.