cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 17 of Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss
Creators: name: Bakker, Henk C Den
name: Cummings, Craig A
name: Ferreira, Vania
name: Vatta, Paolo
name: Orsi, Renato H
name: Degoricija, Lovorka
name: Barker, Melissa
name: Petrauskene, Olga
name: Manohar R Furtado
name: Wiedmann, Martin
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Authors’ original file for figure 9
The Introduction of Fair Trade in Poland: Opportunities and Challenges
Creators: name: Boenning, Kinga
name: Boenning, Kinga
Publisher: name: Unknown
Year: 2009
Subjects: subject: Agribusiness
subject: Agricultural and Food Policy
subject: Central and Eastern Europe
subject: civil society
subject: consumption
subject: Fair Trade
subject: Poland
subject: smallholder producers

description: Fair Trade aims to improve the working and living conditions of producers by paying a higher price for their products as well as offering additional support. The strategic goals of Fair Trade are to support marginalized producers and workers to attain economic security and to make a decent living from their farming activities. In Poland, Fair Trade is expanding very rapidly. Given this development, an ongoing market for Fair Trade products can safely be assumed, but greater coordination among actors and common activities between NGOs and interested businesses may accelerate development even further.
Geomydoecus nebrathkensis Timm and Price
Creators: name: Howell, Lindsey
name: Jelden, Katelyn
name: Rácz, Elizabeth
name: Gardner, Scott L.
name: Gettinger, Donald
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Psocodea
Trichodectidae
Geomydoecus
Geomydoecus nebrathkensis

description: Geomydoecus nebrathkensis Timm and Price
 Type host: Geomys bursarius lutescens Merriam from Lincoln Co., Nebraska.
 Deposition, host records, and locality: HWML 92016, G. lutescens /Ackley 2013; HWML 92035, G. lutescens /Ackley 2013; HWML 101756, G. lutescens /Ackley 2013; HWML 92047, G. lutescens /Ackley 2013; HWML 92054, G. lutescens /Ackley 2013.
 Remarks: Chewing lice are permanent ectoparasites, passing their entire life cycle on the body of the host. Lice of the genus Geomydoecus are exclusively associated with pocket gophers, and are strongly host species specific. Geomydoecus nebrathkensis is easily separated from closely related Geomydoecus oklahomensis Price and Emerson, 1971, to the south, by the lack of a distinct antennal thumb in the male, and from Geomydoecus geomydis (Osborn, 1891), to the east, by general size characters (Timm and Price 1980). These ectoparasites are generally abundant on the host gopher, with all stages (adults, nymphs, and eggs) infesting the pelage of the host.
description: Published as part of Howell, Lindsey, Jelden, Katelyn, Rácz, Elizabeth, Gardner, Scott L. & Gettinger, Donald, 2016, Arthropods infesting small mammals (Insectivora and Rodentia) near Cedar Point Biological Station in southwestern Nebraska, pp. 1-16 in Insecta Mundi 2016 (478) on pages 3-4, DOI: 10.5281/zenodo.5170591
title: Automotive Software Engineering in an increasingly Data-Driven Automotive Sector
Creators: name: Denninger, Oliver
name: Axmann, Joachim K.
name: Kacianka, Severin
name: Westphal, Bernd
Publisher: name: Gesellschaft für Informatik, Bonn
Year: 2025
Subjects: subject: Automotive Software Engineering
subject: Data-Driven
subject: Software-Centric
subject: Automotive trends

description: Automotive trends such as power-train electrification, personalization, connectivity, and automated driving are not well supported by the classical approach to hardware/software architectures that centre around numerous, dedicated electronic control units (ECUs) where software is delivered as part of the ECU and it and its environment does not change much after vehicle assembly. Similarly, current electronic architectures and vehicles do not exploit data-driven software development practices and do not have the capability to make use of unprecedented amounts of data on the vehicle, but also its environment and the Internet. These trends ask for a data-driven approach where the development, production, and operation data of automotive software feed back into continuous correction, improvement, and personalization. In this paper, we report findings from the Transformation Hub Automotive Software Engineering (TASTE) with two years of intensive discussions and workshops with a wide range of companies regarding the challenges facing the German based automotive industry in general, as well as individual companies from Original Equipment Manufacturers (OEM) to different suppliers (TIER-n). We discuss how previously different approaches need to be integrated into new software-centr
Detector Description and Performance for the First Coincidence Observations between LIGO and GEO
Creators: name: The LIGO Scientific Collaboration
name: Abbott, B.
Publisher: name: arXiv
Year: 2003
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: For 17 days in August and September 2002, the LIGO and GEO interferometer gravitational wave detectors were operated in coincidence to produce their first data for scientific analysis. Although the detectors were still far from their design sensitivity levels, the data can be used to place better upper limits on the flux of gravitational waves incident on the earth than previous direct measurements. This paper describes the instruments and the data in some detail, as a companion to analysis papers based on the first data.
description: 41 pages, 9 figures 17 Sept 03: author list amended, minor editorial changes
Supplementary file 7: Table S6
Creators: name: Nesterenko, Maksim
Publisher: name: figshare
Year: 2021
Subjects: subject: 60102 Bioinformatics
subject: FOS: Computer and information sciences
subject: Parasitology

description: Supplementary file 7: Table S6 – The identifiers of potential excretory/secretory proteins
Hoplopleura acanthopus
Creators: name: Howell, Lindsey
name: Jelden, Katelyn
name: Rácz, Elizabeth
name: Gardner, Scott L.
name: Gettinger, Donald
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Psocodea
Hoplopleuridae
Hoplopleura
Hoplopleura acanthopus

description: Hoplopleura acanthopus (Burmeister)
 Type host: Microtus arvalis (Pallas) from Europe.
description: Published as part of Howell, Lindsey, Jelden, Katelyn, Rácz, Elizabeth, Gardner, Scott L. & Gettinger, Donald, 2016, Arthropods infesting small mammals (Insectivora and Rodentia) near Cedar Point Biological Station in southwestern Nebraska, pp. 1-16 in Insecta Mundi 2016 (478) on page 4, DOI: 10.5281/zenodo.5170591
A Roller Coaster Ride: an empirical investigation of the main drivers of wheat price
Creators: name: Algieri, Bernardina
name: Algieri, Bernardina
Publisher: name: Unknown
Year: 2013
Subjects: subject: Agribusiness
subject: Agricultural and Food Policy
subject: Agricultural Finance
subject: Demand and Price Analysis
subject: Food Consumption/Nutrition/Food Safety
subject: Food Security and Poverty
subject: Institutional and Behavioral Economics
subject: International Relations/Trade
subject: Political Economy
subject: wheat price
subject: fundamentals
subject: speculation

description: Over the last decade, commodity prices have registered substantial booms and busts marked by extreme volatility. Wheat in particular, one of the main non-oil commodities, has registered a roller-coaster in price levels which seems to be inconsistent with supply and demand fundamentals. To acutely investigate the drivers of wheat prices and quantify their impact, a Vector Error Correction Model (VECM) has been used. The exogenous variables have been distinguished into four groups: market-specific factors, broad macroeconomic determinants, speculative components, and weather variables. The quadriangulation of the determinants will enable us to better understand the movements in wheat price and identify the specific role of each component. The results show a mix of short and long term factors that are contributing to wheat price movements, and their effect should be taken into account in designing proper policy intervention to mitigate the negative impact of price shocks.
Hoplopleura hesperomydis
Creators: name: Howell, Lindsey
name: Jelden, Katelyn
name: Rácz, Elizabeth
name: Gardner, Scott L.
name: Gettinger, Donald
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Psocodea
Hoplopleuridae
Hoplopleura
Hoplopleura hesperomydis

description: Hoplopleura hesperomydis (Osborn)
 Type host: Peromyscus leucopus (Rafinesque) from Ames, Iowa.
 Deposition, host records, and locality: HWML 91981, Pm. maniculatus /Station Grounds 2012; HWML 101683, Pm. leucopus /Grama Grass 2012; HWML 92023, R. megalotis /Ackley 2013; HWML 101734, Pm. maniculatus /Ackley 2013; HWML 92046, Pm. leucopus /Ackley 2013; HWML 92057, Pm. maniculatus /Grama Grass 2013.
 Remarks: This species name is applied to lice infesting a wide range of deer mice (Peromyscus spp.), and this nominal louse is strongly associated with both Pm. maniculatus and Pm. leucopus. Studies in New Mexico (Morlan and Hoff 1957) and Minnesota (Cook and Beer 1955) demonstrate that prevalence and intensity of infestation can vary widely, both seasonally and geographically. In Indiana, H. hesperomydis has been reported from both Pm. leucopus and Pm. maniculatus (Wilson 1961).
description: Published as part of Howell, Lindsey, Jelden, Katelyn, Rácz, Elizabeth, Gardner, Scott L. & Gettinger, Donald, 2016, Arthropods infesting small mammals (Insectivora and Rodentia) near Cedar Point Biological Station in southwestern Nebraska, pp. 1-16 in Insecta Mundi 2016 (478) on page 4, DOI: 10.5281/zenodo.5170591
Quark mass dependence of s-wave baryon resonances
Creators: name: Garcia-Recio, C.
name: Lutz, M. F. M.
name: Nieves, J.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Nuclear Theory (nucl-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We study the quark mass dependence of $J^P = \frac12^-$ s-wave baryon resonances. Parameter free results are obtained in terms of the leading order chiral Lagrangian. In the 'heavy' SU(3) limit with $m_π=m_K \simeq $ 500 MeV the resonances turn into bound states forming two octets plus a singlet representations of the SU(3) group. A contrasted result is obtained in the 'light' SU(3) limit with $m_π=m_K \simeq $ 140 MeV for which no resonances exist. Using physical quark masses our analysis suggests to assign to the $S=-2$ resonances $Ξ(1690)$ and $Ξ(1620)$ the quantum numbers $J^P=1/2^-$.
description: 4 pages, 2 figure
An ablating super-Earth in an eccentric binary from the Dispersed Matter Planet Project
Creators: name: Barnes, John R.
name: Haswell, Carole A.
name: Staab, Daniel
name: Anglada-Escudé, Guillem
name: Fossati, Luca
name: Doherty, James P. J.
name: Cooper, Joseph
name: Jenkins, James S.
name: Díaz, Matías R.
name: Soto, Maritza G.
name: Rojas, Pablo A. Peña
Publisher: name: arXiv
Year: 2019
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: Earth mass exoplanets are difficult to detect. The Dispersed Matter Planet Project (DMPP) identifies stars which are likely to host the most detectable low mass exoplanets. The star DMPP-3 (HD 42936) shows signs of circumstellar absorption, indicative of mass loss from ablating planets. Here we report the radial velocity (RV) discovery of a highly eccentric 507 d binary companion and a hot super-Earth planet in a 6.67 d orbit around the primary star. DMPP-3A is a solar type star while DMPP-3B is just massive enough to fuse hydrogen. The binary, with semi-major axis 1.22 $\pm$ 0.02 AU, is considerably tighter than others known to host planets orbiting only one of the component stars. The configuration of the DMPP-3 planetary system is rare and indicates dynamical interactions, though the evolutionary history is not entirely clear. DMPP-3Ab is possibly the residual core of a giant planet precursor, consistent with the inferred circumstellar gas shroud.
description: Accepted for publication by Nature Astronomy on 12th November 2019 (Main article, Methods and Supplementary Information; 18 pages, 4 figures, 3 tables)
title: Minimizing Readout and State Preparation Time for Neutral Atom Quantum Computing
Creators: name: Winklmann, Jonas
name: Schulz, Martin
Publisher: name: Gesellschaft für Informatik, Bonn
Year: 2025

description: In order to minimize time spent on readout and state preparation of neutral atom quantum computers, we investigate different algorithms for analyzing fluorescence images and establish an absolute bound on the precision of a perfect estimator. There seems to be a clear trade-off between algorithm run time and accuracy, with a global solver being most accurate. Most importantly, there are several methods that present a compelling compromise between the two extremes.
Oncideres cephalotes Bates 1865
Creators: name: Taboada-Verona, Carlos
name: Mattei, Renato
name: Mattei, Roberto
name: Julio, Carlos Aguilar
name: Lanuza-Garay, Alfredo
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Oncideres
Oncideres cephalotes

description: 12. Oncideres cephalotes Bates, 1865 (Figura 12).
 Material Examinado. VENEZUELA: Amazonas: Municipio Autónomo Atures Pintao. Colectado con trampa de luz. 1 ejemplar. 13/ VI /2015. Hermanos Mattei col.
 Distribución. Bolivia, Brasil, Guayana Francesa (Monné 2016b).
description: Published as part of Taboada-Verona, Carlos, Mattei, Renato, Mattei, Roberto, Julio, Carlos Aguilar & Lanuza-Garay, Alfredo, 2016, Nuevos registros de escarabajos longicornios (Coleoptera: Cerambycidae) para Venezuela, pp. 1-9 in Insecta Mundi 2016 (493) on page 4, DOI: 10.5281/zenodo.5170643
title: Bounds for Quantum Circuits using Logic-Based Analysis
Creators: name: Fauseweh, Benedikt
name: Hermann, Ben
name: Howar, Falk
Publisher: name: Gesellschaft für Informatik, Bonn
Year: 2025
Subjects: subject: quantum computing
subject: verification
subject: logic
subject: quantum circuit
subject: analysis

description: We explore ideas for scaling verification methods for quantum circuits using SMT (Satisfiability Modulo Theories) solvers. We propose two primary strategies: (1) decomposing proof obligations via compositional verification and (2) leveraging linear over-approximation techniques for gate effects. We present two examples and demonstrate the application of these ideas to proof Hamming weight preservation.
Quantum nonstationary oscillators: Invariants, dynamical algebras and coherent states via point transformations
Creators: name: Zelaya, Kevin
name: Rosas-Ortiz, Oscar
Publisher: name: arXiv
Year: 2019
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We consider the relations between nonstationary quantum oscillators and their stationary counterpart in view of their applicability to study particles in electromagnetic traps. We develop a consistent model of quantum oscillators with time-dependent frequencies that are subjected to the action of a time-dependent driving force, and have a time-dependent zero point energy. Our approach uses the method of point transformations to construct the physical solutions of the parametric oscillator as mere deformations of the well known solutions of the stationary oscillator. In this form, the determination of the quantum integrals of motion is automatically achieved as a natural consequence of the transformation, without necessity of any ansatz. It yields the mechanism to construct an orthonormal basis for the nonstationary oscillators, so arbitrary superpositions of orthogonal states are available to obtain the corresponding coherent states. We also show that the dynamical algebra of the parametric oscillator is immediately obtained as a deformation of the algebra generated by the conventional boson ladder operators. A number of explicit examples is provided to show the applicability of our approach.
description: 26 pages, 4 figures
Additional file 1 of Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss
Creators: name: Bakker, Henk C Den
name: Cummings, Craig A
name: Ferreira, Vania
name: Vatta, Paolo
name: Orsi, Renato H
name: Degoricija, Lovorka
name: Barker, Melissa
name: Petrauskene, Olga
name: Manohar R Furtado
name: Wiedmann, Martin
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1:Primer sequences of primers used to confirm absence of specific virulence associated genes. (PDF 54 KB)
(Very) Fast astronomical photometry for meter-class telescopes
Creators: name: Zampieri, L.
name: Naletto, G.
name: Barbieri, C.
name: Burtovoi, A.
name: Fiori, M.
name: Spolon, A.
name: Ochner, P.
name: Lessio, L.
name: Umbriaco, G.
name: Barbieri, M.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Physical sciences

description: Our team at the INAF-Astronomical Observatory of Padova and the University of Padova is engaged in the design, construction and operations of instruments with very high time accuracy in the optical band for applications to High Time Resolution Astrophysics and Quantum Astronomy. Two instruments were built to perform photon counting with sub-nanosecond temporal accuracy, Aqueye+ and Iqueye. Aqueye+ is regularly mounted at the 1.8m Copernicus telescope in Asiago, while Iqueye was mounted at several 4m class telescopes around the world and is now attached through the Iqueye Fiber Interface at the 1.2m Galileo telescope in Asiago. They are used to perform coordinated high time resolution optical observations and, for the first time ever, experiments of optical intensity interferometry on a baseline of a few kilometers. I will report on recent technological developments and scientific results obtained within the framework of this project.
description: 12 pages, 3 figures, Proceedings of the Conference "Observing techniques, instrumentation and science for metre-class telescopes II", Tatransk\'a Lomnica, Slovakia, September 24-28, 2018
Entropy-Based Analysis of the Impact of Environmentally Sensitive Elements on Groundwater Quality of the Ameka Region of Southeast Nigeria: Medical Geology Implications
Creators: name: Johnbosco C. Egbueri
name: Ameh, Peter D.
name: Monday T. Enyigwe
name: Chinanu O. Unigwe
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy

description: Understanding the impact of natural and modified environment on human health is a subject within the scope of medical geology. Ameka and its environs in southeastern Nigeria is known for intensive mining and agricultural activities that frequently predispose water resources to pollution by environmentally sensitive elements (ESEs). The present study analyzed the groundwater quality and associated probabilistic human health risks due to ESEs in Ameka area, using multiple indices and a novel health risk assessment framework, HHRISK. Entropy-weighted water quality index and other geochemical evaluation indices (including pollution index, enrichment factor, index of geoaccumulation, pollution index of groundwater, and quantification of contamination) revealed that all the groundwater samples from hand-dug wells and boreholes were extremely polluted and hence unsuitable for drinking. The HHRISK model was utilized for ingestion and dermal exposure routes assessments. Results showed that all the samples pose very high carcinogenic and non-carcinogenic health risks. With respect to aggregated non-carcinogenic HHRISK, the order of health threat impact of the ESEs for children and adult populations is predicted as Cd > As > Se > Co > Ni > Pb > Mn > Zn > Cu > Fe. However, aggregated cancer risk for both populations followed the trend Ni > Cd > As > Pb. Furthermore, cumulative non-carcinogenic risk (HRQcum) and carcinogenic risk (CRcum) scores (for children and adults) exceeded standard limits in all the samples. However, the scores obtained for the adults were generally lower, implying that the children population is more vulnerable to both non-carcinogenic and carcinogenic health risks. Thus, there is urgent need to adopt environmentally-friendly pollution mitigation measures in the Ameka area.
Measurements of J/psi --> p \bar{p}
Creators: name: Bai, J. Z.
Publisher: name: arXiv
Year: 2004
Subjects: subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: The process J/ψ--> p \bar{p} is studied using 57.7 X 10^6 J/ψevents collected with the BESII detector at the Beijing Electron Positron Collider. The branching ratio is determined to be Br(J/ψ--> p \bar{p})=(2.26 +- 0.01 +- 0.14) X 10^{-3}, and the angular distribution is well described by \frac{dN}{d cosθ_p}=1+α\cos^2θ_p with α= 0.676 +- 0.036 +- 0.042, where θ_p is the angle between the proton and beam directions. The value of αobtained is in good agreement with the predictions of first-order QCD.
description: 6 pages, 2 figures, RevTex4, Submitted to Phys.Lett.B
Using Mobile Health to Improve Mild Depression Outcomes in Adult Primary Care
Creators: name: marek, michele
Publisher: name: University of Massachusetts Amherst
Year: 2019

Abstract
Background: Mild depression is a common patient complaint in primary care, potentially impairing role function in multiple dimensions, with risk for escalation to severe Major Depressive Disorder (MDD), a chronic, recurring illness with multiple comorbidities at high emotional and economic cost to individuals, families, and society. Barriers to care include lack of access to Mental Health Specialists, financial constraints and stigma, all of which can cause escalation of symptoms to the point of disability and are magnified in underserved populations.
Purpose: The primary goal of this quality improvement (QI) project was to improve depression symptoms using the evidence-based mobile app IntelliCare to deliver Cognitive Behavioral Treatment (CBT) as part of an eight-week treatment protocol.
Methods: Mildly depressed adult primary care patients (PHQ-9 score 5-9) meeting inclusion criteria were asked to participate in an eight-week collaborative protocol in which they used the IntelliCare app at least weekly. Bi-weekly questionnaires were administered assessing patient symptoms, app usage and patient concerns. A post-intervention PHQ-9 was done at eight-weeks.
Results: The majority of participants (67%) completed the protocol with an average improvement in post-intervention PHQ-9 scores of 53%. The Wilcoxon-matched pairs test demonstrated a statistically significant improvement in post-protocol PHQ-9 scores (p
Implications to Practice: Willingness of patients to use the mobile health app IntelliCare with improvement in their depression symptoms support further study of its implementation in practice reducing barriers to care including financial constraints, limited access, and stigma.
Conclusion: Evidence-based mobile apps such as IntelliCare as part of a treatment plan for mild depression may help decrease barriers to treatment for depression and improve patient outcomes.
 Keywords: depression, primary care, mobile apps, telehealth, adults
Functional modeling of pedaling kinematics for the Stroke patients
Creators: name: Sounak Chakraborty
name: Tanujit Dey
name: Anish Mukherjee
name: Alberts, Jay L.
name: Linder, Susan M.
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Medicine
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Understanding deficits in motor control through the analysis of pedaling biomechanics plays a key role in the treatment of stroke patients. A thorough study of the impact of different exercise patterns and workloads on the change between pre- and post-treatment movement patterns in the patients is therefore of utmost importance to the clinicians. The objective of this study was to analyze the difference between pre- and post-treatment pedaling torques when the patients are subject to different exercise groups with varying workloads. The effects of affected vs unaffected side along with the covariates age and BMI have also been accounted for in this work. Two different three-way ANOVA-based approaches have been implemented here. In the first approach, a random projection-based ANOVA technique has been performed treating the pedaling torques as functional response, whereas the second approach utilizes distance measures to summarize the difference between pre- and post-treatment torques and perform nonparametric tests on it. Bayesian bootstrap has been used here to perform tests on the median distance. A group of stroke patients have been studied in the Cleveland Clinic categorizing them into different exercise groups and workload patterns. The data obtained have been analyzed with the aforementioned techniques, and the results have been reported here. These techniques turn out to be promising and will help clinicians recommend personalized treatment to stroke patients for optimal results.
Crypticerya zeteki Usually
Creators: name: Kondo, Takumasa
name: Gullan, Penny J.
name: Peronti, Ana L. B. G.
name: Ramos-Portilla, Andrea Amalia
name: Caballero, Alejandro
name: Villarreal-Pretelt, Nelson
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Margarodidae
Crypticerya
Crypticerya zeteki

description: Crypticerya zeteki (Cockerell)
 Icerya zeteki Cockerell 1914: 148.
 Crypticerya zeteki (Cockerell); Unruh and Gullan 2008a: 24. Change of combination.
 Unmounted material (adapted from Cockerell 1914). Adult female oval, 4.5 mm long, densely covered in white cottony tufts which are slightly stained with yellow; with an elongated central mass of white wax surrounded by a channel or depression, except anteriorly, and margined by a series of short quadrate tufts, about seven on each side, separated from each other only by slight depressions; on each side, about 10 short subquadrate tufts which are not separated by any interval; anteriorly with a suberect, horn-like but truncate waxy projection, 1 mm or more long; posteriorly with a similar waxy projection, but much longer (up to 4 mm), projecting over the ovisac. Ovisac 3.0– 3.5 mm long, strongly fluted, white suffused with pink; without glassy filaments; legs and antennae blackish (Figure 1F).
 Remarks. See remarks for C. brasiliensis above.
description: Published as part of Kondo, Takumasa, Gullan, Penny J., Peronti, Ana L. B. G., Ramos-Portilla, Andrea Amalia, Caballero, Alejandro & Villarreal-Pretelt, Nelson, 2016, First records of the iceryine scale insects Crypticerya brasiliensis (Hempel) and Crypticerya genistae (Hempel) (Hemiptera: Monophlebidae) for Colombia, pp. 1-9 in Insecta Mundi 2016 (480) on pages 5-6, DOI: 10.5281/zenodo.5170593
Quadratic Hecke sums and mass equidistribution
Creators: name: Nelson, Paul D.
Publisher: name: arXiv
Year: 2020
Subjects: subject: Number Theory (math.NT)
subject: FOS: Mathematics
subject: Primary 58J51, Secondary 11F11, 11F67

description: We consider the analogue of the quantum unique ergodicity conjecture for holomorphic Hecke eigenforms on compact arithmetic hyperbolic surfaces. We show that this conjecture follows from nontrivial bounds for Hecke eigenvalues summed over quadratic progressions. Our reduction provides an analogue for the compact case of a criterion established by Luo--Sarnak for the case of the non-compact modular surface. The novelty is that known proofs of such criteria have depended crucially upon Fourier expansions, which are not available in the compact case. Unconditionally, we establish a twisted variant of the Holowinsky--Soundararajan theorem involving restrictions of normalized Hilbert modular forms arising via base change.
description: 31 pages; to appear in IMRN
title: Load Balancing For High Performance Computing Using Quantum Annealing
Creators: name: Rathore, Omer
name: Basden, Alastair
name: Chancellor, Nicholas
name: Kusumaatmaja, Halim
Publisher: name: Gesellschaft für Informatik, Bonn
Year: 2025
Subjects: subject: Quantum annealing
subject: Optimizing parallel applications

description: Load balancing is the distribution of computational work between available processors. Here, we investigate the application of quantum annealing to load balance two paradigmatic algorithms in high performance computing. Namely, adaptive mesh refinement and smoothed particle hydrodynamics are chosen as representative grid and off-grid target applications. While the methodology for obtaining real simulation data to partition is application specific, the proposed balancing protocol itself remains completely general. In a grid based context, quantum annealing is found to outperform classical methods such as the round robin protocol but lacks a decisive advantage over more advanced methods such as steepest descent or simulated annealing despite remaining competitive. However, for the more complex particle formulation, approached as a multi-objective optimization, quantum annealing solutions are demonstrably Pareto dominant to state of the art classical methods across both objectives. This signals a noteworthy advancement in solution quality which can have a large impact on effective CPU usage.
title: Workflow for Creating and Sealing a Research Data Management Container (RDMC)
Creators: name: Bernoth, Jan
name: Ayon, Safial Islam
name: Laban, Firas Al
name: Bavendiek, Stefan
name: Federrath, Hannes
name: Striewe, Michael
name: Goedicke, Michael
Publisher: name: Gesellschaft für Informatik, Bonn
Year: 2025
Subjects: subject: Research Data and Software Management
subject: Research Data Management Container
subject: NFDIxCS

description: This paper describes the process of creating a Research Data Management Container (RDMC) from NFDIxCS . The RDMC encapsulates data, software components, and its context, allowing it to be published as a standalone artifact or alongside a paper/publication. Based on user stories, a workflow was developed to create and seal the RDMC. During the creation of the RDMC, a manifest file is provided to describe the architecture and relevant metadata of the container, and security information to be included in the sealing process. Two different approaches are proposed for sealing the RDMC. The development of the RDMC is still in its early stages, as it is paving the way for further research in the management of Research Data and Software.
MOESM5 of Dynamics of microbiota during mechanical ventilation in aspiration pneumonia
Creators: name: Otsuji, Ken
name: Fukuda, Kazumasa
name: Ogawa, Midori
name: Fujino, Yoshihisa
name: Kamochi, Masayuki
name: Saito, Mitsumasa
Publisher: name: figshare
Year: 2019
Subjects: subject: Biophysics
subject: Medicine
subject: Molecular Biology
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Cancer

description: Additional file 5: Table S1. Predominant Phylotypes Detected by Clone Library Method in 22 Subjects.
Subgroup analysis based on structured mixed-effects models for longitudinal data
Creators: name: Shen, Juan
name: Qu, Annie
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy
subject: Plant Biology

description: In recent years, subgroup analysis has emerged as an important tool to identify unknown subgroup memberships. However, subgroup analysis is still under-studied for longitudinal data. In this paper, we propose a structured mixed-effects approach for longitudinal data to model subgroup distribution and identify subgroup membership simultaneously. In the proposed structured mixed-effects model, the heterogeneous treatment effect is modeled as a random effect from a two-component mixture model, while the membership of the mixture model is incorporated using a logistic model with respect to some covariates. One advantage of our approach is that we are able to derive the estimation of the treatment effects through an EM-type algorithm which keeps the subgroup membership unchanged over time. Our numerical studies and real data example demonstrate that the proposed model outperforms other competing methods.
title: Bridge the Gap Between HPC Systems and Various Quantum Platforms
title: A Unified Quantum Platform
titleType: Subtitle
Creators: name: Elsharkawy, Amr
name: Guo, Xiaorang
name: Schulz, Martin
Publisher: name: Gesellschaft für Informatik, Bonn
Year: 2025

description: This paper presents the development of a unified quantum platform (UQP) and how it is being integrated into high-performance computing (HPC) infrastructure at both software and hardware levels. Building on previous work in hybrid HPC-QC workflows, the UQP establishes a unified low-level interface between classical HPC systems and emerging quantum hardware. Key contributions include a unified HPCQC runtime library that bridges quantum intermediate representation (QIR) programming systems with a hybrid ISA, along with a scalable QCP micro-architecture. Verified for correctness, the UQP runtime library demonstrates super-linear scalability in execution time and memory with the number of qubits, addressing critical needs for QC hardware scalability.
title: Workshop Summary
Creators: name: Henß, Jörg
name: Kugele, Stefan
Publisher: name: Gesellschaft für Informatik, Bonn
Year: 2025
Subjects: subject: Automotive
subject: Software Engineering
subject: Workshop

description: Software-driven systems are becoming pivotal, underpinning the majority of innovations in contemporary automobiles. This workshop is poised to explore a plethora of topics pertinent to automotive software development. Attendees will engage in discourse on the most apt methodologies, techniques, and tools essential for navigating the foremost challenges faced by researchers and practitioners in the field.
Additional file 5 of Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss
Creators: name: Bakker, Henk C Den
name: Cummings, Craig A
name: Ferreira, Vania
name: Vatta, Paolo
name: Orsi, Renato H
name: Degoricija, Lovorka
name: Barker, Melissa
name: Petrauskene, Olga
name: Manohar R Furtado
name: Wiedmann, Martin
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 5:PDF file containing a graphic comparison of internalin GHE region. Gray arrows indicate conserved genes adjacent to the region. (PDF 318 KB)
Model for neutrino mixing based on SO(10)
Creators: name: Oshimo, Noriyuki
Publisher: name: arXiv
Year: 2003
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Assuming grand unified theory (GUT) and supersymmetry, we propose a simple model which can consistently accommodate the masses and mixings for quarks and leptons. The grand unified group is SO(10), and $\bf 10$, $\bf 120$, and $\bar {\bf 126}$ representations are introduced for the Higgs superfields which give masses to the quarks and leptons. The differences of masses and mixings between the quarks and the leptons are attributed to the Higgs boson structure. Below the GUT energy scale, the model is the same as the minimal supersymmetric standard model except its inclusion of dimension-5 operators for the small neutrino masses. The renormalization group equations of the independent parameters for the Higgs couplings with the quarks and leptons are given explicitly to connect the two energy scales of GUT and electroweak theory.
description: 17 pages, 2 figures
Entropic curvature and convergence to equilibrium for mean-field dynamics on discrete spaces
Creators: name: Erbar, Matthias
name: Fathi, Max
name: Schlichting, André
Publisher: name: arXiv
Year: 2019
Subjects: subject: Probability (math.PR)
subject: Mathematical Physics (math-ph)
subject: FOS: Mathematics
subject: FOS: Physical sciences

description: We consider non-linear evolution equations arising from mean-field limits of particle systems on discrete spaces. We investigate a notion of curvature bounds for these dynamics based on convexity of the free energy along interpolations in a discrete transportation distance related to the gradient flow structure of the dynamics. This notion extends the one for linear Markov chain dynamics studied by Erbar and Maas. We show that positive curvature bounds entail several functional inequalities controlling the convergence to equilibrium of the dynamics. We establish explicit curvature bounds for several examples of mean-field limits of various classical models from statistical mechanics.
description: 26 pages
Additional file 4 of Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss
Creators: name: Bakker, Henk C Den
name: Cummings, Craig A
name: Ferreira, Vania
name: Vatta, Paolo
name: Orsi, Renato H
name: Degoricija, Lovorka
name: Barker, Melissa
name: Petrauskene, Olga
name: Manohar R Furtado
name: Wiedmann, Martin
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 4:PDF file containing a graphic comparison of the inlAB region. (PDF 375 KB)
Identification of Salmonella Serovars before and after Ultraviolet Light Irradiation by Fourier Transform Infrared (FT-IR) Spectroscopy and Chemometrics
Creators: name: Muntean, Cristina M.
name: Dina, Nicoleta E.
name: Tǎbǎran, Alexandra
name: Gherman, Ana M. R.
name: Fǎlǎmaş, Alexandra
name: Olar, Loredana E.
name: Colobǎţiu, Liora M.
name: Rǎzvan Ştefan
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Biophysics
subject: Biochemistry
subject: Space Science
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Vibrational properties and structural behavior upon ultraviolet (UV) irradiation are reported here for DNAs isolated from three serovars of Salmonella bacteria, respectively (S. enteritidis, S. infantis and S. typhimurium) by using Fourier transform infrared spectroscopy (FT-IR). The FT-IR absorbance spectra were recorded for bacterial DNAs, control and UV irradiated samples (30 min, 1 h, 1 h 30 min), respectively, and are presented in the wavenumber ranges from 800 to 1800 cm−1 and from 3000 to 4000 cm−1, respectively. Molecular specific structural information has been found based on DNA marker bands, which were monitored primarily in terms of intensity changes. As a general remark, a serovar’s dependent nonlinear behavior has been detected for some FT-IR band intensities corresponding to Salmonella DNAs, as a function of irradiation time. Particularly, alterations in DNA functional groups and molecular geometry have been observed. Chemometric analysis such as principal component analysis (PCA) and hierarchical clustering analysis (HCA) were successfully applied for the identification of inter- and intra- serovar differences between DNA spectra, before and after UV irradiation. The elucidation of the main spectral features characteristic to pathogenic bacterial DNAs offers further opportunity for bacteria identification and for establishing the mechanisms of infections, leading to the development of innovative diagnosis tools and more effective therapies. Particularly, DNA-damaging agents are most effective in cancer therapy.
title: Code Generation for Niche Programming Languages with Large Language Models
Creators: name: Kogler, Philipp
name: Chen, Wei
name: Wallner, Stefan
Publisher: name: Gesellschaft für Informatik, Bonn
Year: 2025
Subjects: subject: Code Generation
subject: Large Language Models
subject: Niche Programming Languages
subject: Domainspecific Languages

description: Code generation is a prominent use-case for Large Language Models (LLMs). Specialized LLMs such as CodeLlama or Codestral are trained on a large variety of programming languages and achieve a strong performance on coding tasks. However, when applied to less common programming languages which are not included in their pre-training corpus, their performance decreases. In this work, we describe an approach to integrate a LLM in the context of a coding copilot for specific applications where code shall be generated in a niche general-purpose programming language. We study the use of an intermediate domain-specific-language to limit the scope to the application-specific needs, and to enable the LLM to reliably generate code in such an application-specific scenario. We evaluate this method on two use-cases: Generating constraints in the context of product configuration using the MiniZinc constraint language, and generating test specifications in the context of railway infrastructure using the Balise Telegram Test Language. Our results show that defining an intermediate scope-limited DSL improves the performance of an LLM in our evaluated application-specific code generation scenarios. However, we can not guarantee that the presented performance results are generalizable to all scenarios.
Additional file 6 of Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss
Creators: name: Bakker, Henk C Den
name: Cummings, Craig A
name: Ferreira, Vania
name: Vatta, Paolo
name: Orsi, Renato H
name: Degoricija, Lovorka
name: Barker, Melissa
name: Petrauskene, Olga
name: Manohar R Furtado
name: Wiedmann, Martin
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 6:PDF file containing a graphic comparison of the prfA cluster region(PDF 279 KB)
Second-order corrections to noncommutative spacetime inflation
Creators: name: Kim, Hungsoo
name: Lee, Gil Sang
name: Lee, Hyung Won
name: Myung, Yun Soo
Publisher: name: arXiv
Year: 2004
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We investigate how the uncertainty of noncommutative spacetime affects on inflation. For this purpose, the noncommutative parameter $μ_0$ is taken to be a zeroth order slow-roll parameter. We calculate the noncommutative power spectrum up to second order using the slow-roll expansion. We find corrections arisen from a change of the pivot scale and the presence of a variable noncommutative parameter, when comparing with the commutative power spectrum. The power-law inflation is chosen to obtain explicit forms for the power spectrum, spectral index, and running spectral index. In cases of the power spectrum and spectral index, the noncommutative effect of higher-order corrections compensates for a loss of higher-order corrections in the commutative case. However, for the running spectral index, all higher-order corrections to the commutative case always provide negative spectral indexes, which could explain the recent WMAP data.
description: 15 pages, no figure, version published in PRD
(Mis)Information Operations: An Integrated Perspective
Creators: name: Cinelli, Matteo
name: Conti, Mauro
name: Finos, Livio
name: Grisolia, Francesco
name: Novak, Petra Kralj
name: Peruzzi, Antonio
name: Tesconi, Maurizio
name: Zollo, Fabiana
name: Quattrociocchi, Walter
Publisher: name: arXiv
Year: 2019
Subjects: subject: Computers and Society (cs.CY)
subject: Social and Information Networks (cs.SI)
subject: FOS: Computer and information sciences

description: The massive diffusion of social media fosters disintermediation and changes the way users are informed, the way they process reality, and the way they engage in public debate. The cognitive layer of users and the related social dynamics define the nature and the dimension of informational threats. Users show the tendency to interact with information adhering to their preferred narrative and to ignore dissenting information. Confirmation bias seems to account for users decisions about consuming and spreading content; and, at the same time, aggregation of favored information within those communities reinforces group polarization. In this work, the authors address the problem of (mis)information operations with a holistic and integrated approach. Cognitive weakness induced by this new information environment are considered. Moreover, (mis)information operations, with particular reference to the Italian context, are considered; and the fact that the phenomenon is more complex than expected is highlighted. The paper concludes by providing an integrated research roadmap accounting for the possible future technological developments.
description: The paper first appeared in Volume 18, Issue 3 of the Journal of Information Warfare
Additional file 3 of Neutrophil CD64 index as a superior indicator for diagnosing, monitoring bacterial infection, and evaluating antibiotic therapy: a case control study
Creators: name: Gao, Yanting
name: Lin, Lihui
name: Zhao, Jinyan
name: Peng, Xia
name: Li, Li
Publisher: name: figshare
Year: 2022
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Additional file 3: Table S1. The distributionof bacteria strains.
Psapharochrus chrysopus
Creators: name: Taboada-Verona, Carlos
name: Mattei, Renato
name: Mattei, Roberto
name: Julio, Carlos Aguilar
name: Lanuza-Garay, Alfredo
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Psapharochrus
Psapharochrus chrysopus

description: 10. Psapharochrus chrysopus (Bates, 1861) (Figura 10).
 Material Examinado. VENEZUELA: Amazonas: Municipio Autónomo Atures. Pintao. Colecta manual. 1 ejemplar. 10/X/2015. Hermanos Mattei col.
 Distribución. Brasil, Guayana Francesa, Perú (Monné 2016b).
description: Published as part of Taboada-Verona, Carlos, Mattei, Renato, Mattei, Roberto, Julio, Carlos Aguilar & Lanuza-Garay, Alfredo, 2016, Nuevos registros de escarabajos longicornios (Coleoptera: Cerambycidae) para Venezuela, pp. 1-9 in Insecta Mundi 2016 (493) on page 4, DOI: 10.5281/zenodo.5170643