cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Virtue and the Philosophical Life in the Thomist Tradition at the University of Padua, from Aquinas to Cajetan (1225-1534)
Creators: name: Waldorf, Steven Douglas
Publisher: name: Apollo - University of Cambridge Repository
Year: 2019
Subjects: Cajetan
nature
Aquinas
Padua
virtue
Thomist

description: This dissertation examines the place of the philosophical life at the University of Padua in the late Middle Ages. Scholars like Alain de Libera have addressed the question of whether arts faculty members in other medieval university contexts, especially Paris prior to 1277, believed that a life of purely philosophical contemplation, uninfluenced by Christian revelation, constituted the ultimate, complete, and self-sufficient good for human nature. De Libera concluded that the 1277 condemnations drove this conception of the philosophical life out of the university context entirely. However, if we consider a closely related question concerning the virtues, we find that, in the understudied context of Padua, the philosophical life persisted in the Thomist tradition. That question is the nature of the relationship of the acquired, natural virtues to the infused virtues of Christian revelation. If the acquired virtues are complete in themselves, not requiring supernaturally infused virtue for their full perfection, then the life to which acquired virtue orients us—namely, the life of purely philosophical contemplation—is a complete and self-sufficient good. By contrast, if the acquired virtues are intrinsically incomplete until they are ordered to a supernatural end by the infused virtues, it follows that there is something intrinsically imperfect about the philosophical life. Accordingly, I compare Cajetan, the foremost representative of the Thomist tradition at Padua, with Aquinas himself on the question of the relationship of acquired to infused virtue, concluding that Cajetan diverged from his master in a way that led to a conception of the life of purely philosophical contemplation as man’s highest good. I then analyze the source of this divergence, attributing it to a distinctive view of human nature. This view of nature, in turn, is the result of a differing understanding of the relationship of philosophy to theology, an understanding that arose in fourteenth-century Paris and was transmitted to Cajetan via Capreolus. Furthermore, the Aristotelianism of Cajetan’s Paduan context also shaped his view of human nature. Identifying Aristotelian philosophy with philosophical truth as such and reading the Stagirite in isolation from preoccupations arising from revelation were both widespread intellectual trends at Padua during Cajetan’s time there, and they exercised significant influence on his theory of human nature and the virtues. Finally, I reflect on the extent to which Cajetan was conscious of the implications of his understanding of human nature and the virtues for the philosophical life, concluding that the textual evidence, though sparse, suggests that he was indeed aware of these implications.
Facilitating outcomes: multi-stakeholder processes for influencing policy change on urban agriculture in selected West African and South Asian cities
Creators: name: Amerasinghe, Priyanie
name: Cofie, Olufunke
name: Larbi, T. O.
name: Drechsel, Pay
name: Amerasinghe, Priyanie
name: Cofie, Olufunke
name: Larbi, T. O.
name: Drechsel, Pay
Publisher: name: Unknown
Year: 2013
Subjects: subject: Agribusiness
subject: Agricultural Finance
subject: Urban agriculture Agricultural development Governance Stakeholders Policy Action plan Capacity building

description: The Multi-stakeholder Policy Formulation and Action Planning approach was applied in the context of a multi-city study to influence and/or change policies that govern urban agriculture practices in three African and two Asian countries. Although the approach was successful and resulted in remarkable outcomes, it showed space for improvement to facilitate its application. The study also showed that there are significant regional differences in how best to achieve policy change, which require careful attention in order to achieve the highest returns on investment in the facilitation of impact pathways.
Enhancing Countries' Access to Natural Disaster Insurance by Addressing Current Challenges in the Catastrophe Bond Market
Creators: name: Bergmüller, Kai Oliver
Publisher: name: Zenodo
Year: 2025

description: Data produced during the analysis. The data is not urgently necessary, as it can be produced with the code. However, it speeds things up significantly. Complete hazard and exposure datasets are saved on the Euler cluster.

It also included the power-point representation which accompanies the script hands_on_example_simulate_bond.py in the repository.
OSHQOZON ICHAK KASALLIKLARI VA ULARNI OLDINI OLISH
Creators: name: Alimardonova, Mutabar
name: Usmonova, Suğdiyona
name: Shernazarova, Dilnura
Publisher: name: Zenodo
Year: 2025

description: Ushbu maqolada hozirgi kunga kelib eng ko’p uchraydigan oshqozonichak kasalliklari bilan tanishib chiqamiz.Maqolada gastrit, pilorus,ingichka ichakkasalliklari,yog’on ichak kasalliklarini korib chiqamiz.
Distribution-induced Bidirectional Generative Adversarial Network for Graph Representation Learning
Creators: name: Zheng, Shuai
name: Zhu, Zhenfeng
name: Zhang, Xingxing
name: Liu, Zhizhe
name: Cheng, Jian
name: Zhao, Yao
Publisher: name: arXiv
Year: 2019
Subjects: subject: Machine Learning (cs.LG)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: Graph representation learning aims to encode all nodes of a graph into low-dimensional vectors that will serve as input of many compute vision tasks. However, most existing algorithms ignore the existence of inherent data distribution and even noises. This may significantly increase the phenomenon of over-fitting and deteriorate the testing accuracy. In this paper, we propose a Distribution-induced Bidirectional Generative Adversarial Network (named DBGAN) for graph representation learning. Instead of the widely used normal distribution assumption, the prior distribution of latent representation in our DBGAN is estimated in a structure-aware way, which implicitly bridges the graph and feature spaces by prototype learning. Thus discriminative and robust representations are generated for all nodes. Furthermore, to improve their generalization ability while preserving representation ability, the sample-level and distribution-level consistency is well balanced via a bidirectional adversarial learning framework. An extensive group of experiments are then carefully designed and presented, demonstrating that our DBGAN obtains remarkably more favorable trade-off between representation and robustness, and meanwhile is dimension-efficient, over currently available alternatives in various tasks.
description: Accepted to CVPR2020. 10 pages, 5 figures, 4 tables, fixed a error in the Figure.1
Existential Risk and the Technological Understanding of Being
Creators: name: Hecker, Kim Caspar
Publisher: name: Apollo - University of Cambridge Repository
Year: 2019
Subjects: political theory
philosophy of technology
existential risk
Martin Heidegger
Hannah Arendt
political theory of technology

description: ‘Existential risk research’ or ‘existential risk studies’ is an emerging, interdisciplinary genre that seeks to provide an integrative, scientific framework for the study of existential dangers to humanity. Having been introduced by Oxford Philosopher Nick Bostrom in the early 2000s, existential risk research over the past ca. 15 years has become increasingly popular amongst scientists from a wide variety of academic disciplines and recent years have seen the foundation of research institutes, dedicated exclusively to the study of existential risk, at some of the most prestigious research universities in Europe and the United States. In spite of its interdisciplinary character, neither history nor political theory play a prominent role in existential risk research. This dissertation argues that this is a regrettable state of affairs and presents the first systematic attempt to survey and frame existential risk research from a political thought perspective. Drawing on three authors who wrote about deeply related questions in the post-war decades - Martin Heidegger, Hannah Arendt and Günther Anders - it contextualises existential risk studies in the light of long-standing discussions about the interrelations between modern technology, human value and human agency under existential conditions. At the heart of these discussions the dissertation identifies a range of ontological complications. It demonstrates that, despite the fact that existential risk scholarship tends to side-line the type of ontological problems that have been uncovered by Heidegger, Arendt and Anders, it cannot escape this dimension altogether but instead highlights the imminent relevance of these authors’ analyses. One instance in which this becomes particularly salient is in the context of existential fears surrounding artificial intelligence. The dissertation therefore closes with a discussion of the issue of artificial intelligence in existential risk research, bringing together insights from the preceding chapters.
description: This thesis was funded by a studentship of the Friedrich Naumann Stiftung für die Freiheit with funds provided by the German Federal Ministry for Education and Research as well as by a studentship by the Economic and Social Research Doctoral Training Partnership Cambridge.
Anarsia lineatella Zeller 1839
Creators: name: Junnilainen, Jari
name: Karsholt, Ole
name: Nupponen, Kari
name: Kaitila, Jari-Pekka
name: Nupponen, Timo
name: Olschwang, Vladimir
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Gelechiidae
Anarsia
Anarsia lineatella

description: Anarsia lineatella Zeller, 1839
Berlin 02. VII.1997; Bishtiryak 13.VII.1998; Chalk Hills 03–07.VI.1998, 10.VI.2001, 04.VIII.2005; Guberlja 26.VI.2003; Kuvandyk 13–16.VI.1998; Miass 28.VI.1996; Moskovo 11.VII.1998, 02.VI.2004; Verbljushka 30.V–02.VI.1998, 15.VII.1998, 17–18.VI.1999, 31.V–01.VI.2004, 01.VIII.2005. A total of 32 exx.
 Distribution. Widely distributed through Europe, eastwards to Volga and S Ural. Outside Europe in the Caucasus, C Asia, Far East Russia (Primorskiy kray) and India. Introduced to N America and Australia.
description: Published as part of Junnilainen, Jari, Karsholt, Ole, Nupponen, Kari, Kaitila, Jari-Pekka, Nupponen, Timo & Olschwang, Vladimir, 2010, The gelechiid fauna of the southern Ural Mountains, part II: list of recorded species with taxonomic notes (Lepidoptera: Gelechiidae) 2367, pp. 1-68 in Zootaxa 2367 (1) on page 61, DOI: 10.11646/zootaxa.2367.1.1, http://zenodo.org/record/10093655
Star-convex Polyhedra for 3D Object Detection and Segmentation in Microscopy
Creators: name: Weigert, Martin
name: Schmidt, Uwe
name: Haase, Robert
name: Sugawara, Ko
name: Myers, Gene
Publisher: name: arXiv
Year: 2019
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: Accurate detection and segmentation of cell nuclei in volumetric (3D) fluorescence microscopy datasets is an important step in many biomedical research projects. Although many automated methods for these tasks exist, they often struggle for images with low signal-to-noise ratios and/or dense packing of nuclei. It was recently shown for 2D microscopy images that these issues can be alleviated by training a neural network to directly predict a suitable shape representation (star-convex polygon) for cell nuclei. In this paper, we adopt and extend this approach to 3D volumes by using star-convex polyhedra to represent cell nuclei and similar shapes. To that end, we overcome the challenges of 1) finding parameter-efficient star-convex polyhedra representations that can faithfully describe cell nuclei shapes, 2) adapting to anisotropic voxel sizes often found in fluorescence microscopy datasets, and 3) efficiently computing intersections between pairs of star-convex polyhedra (required for non-maximum suppression). Although our approach is quite general, since star-convex polyhedra include common shapes like bounding boxes and spheres as special cases, our focus is on accurate detection and segmentation of cell nuclei. Finally, we demonstrate on two challenging datasets that our approach (StarDist-3D) leads to superior results when compared to classical and deep learning based methods.
description: Conference paper at WACV 2020
Additional file 2: of Functional CRISPR screen identifies AP1-associated enhancer regulating FOXF1 to modulate oncogene-induced senescence
Creators: name: Han, Ruiqi
name: Li, Li
name: Ugalde, Alejandro
name: Tal, Arieh
name: Manber, Zohar
name: Barbera, Eric
name: Chiara, Veronica
name: Elkon, Ran
name: Agami, Reuven
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: Information Systems not elsewhere classified
subject: Cancer
subject: Hematology

description: Figures S1â S9. (PDF 13693 kb)
JES-Linkage-Supplemental Text-revision
Creators: name: Jinjiang Fan
name: Campioli, Enrico
name: Sottas, Chantal
name: Zirkin, Barry
name: Papadopoulos, Vassilios
Publisher: name: figshare
Year: 2019
Subjects: subject: 110306 Endocrinology
subject: FOS: Clinical medicine

description: Amhr2-Cre-mediated global Tspo knockout
Eccentricity Evolution for Planets in Gaseous Disks
Creators: name: Goldreich, Peter
name: Sari, Re'em
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We investigate the hypothesis that interactions between a giant planet and the disk from which it forms promote eccentricity growth. These interactions are concentrated at discrete Lindblad and corotation resonances. Interactions at principal Lindblad resonances cause the planet's orbit to migrate and open a gap in the disk if the planet is sufficiently massive. Those at first order Lindblad and corotation resonances change the planet's orbital eccentricity. Eccentricity is excited by interactions at external Lindblad resonances which are located on the opposite side of corotation from the planet, and damped by co-orbital Lindblad resonances which overlap the planet's orbit. If the planet clears a gap in the disk, the rate of eccentricity damping by co-orbital Lindblad resonances is reduced. Density gradients associated with the gap activate eccentricity damping by corotation resonances at a rate which initially marginally exceeds that of eccentricity excitation by external Lindblad resonances. But the corotation torque drives a mass flux which reduces the density gradient near the resonance. Sufficient partial saturation of corotation resonances can tip the balance in favor of eccentricity excitation. A minimal initial eccentricity of a few percent is required to overcome viscous diffusion which acts to unsaturate corotation resonances by reestablishing the large scale density gradient. Thus eccentricity growth is a finite amplitude instability. Formally, interactions at the apsidal resonance, which is a special kind of co-orbital Lindblad resonance, appears to damp eccentricity faster than external Lindblad resonances can excite it. However, apsidal waves have such long wavelengths that they do not propagate in protoplanetary disks. This reduces eccentricity damping by the apsidal resonance to a modest level.
description: Submitted to ApJ
An Ideal Testbed for Planet-disk Interaction: Two Giant Protoplanets in Resonance Shaping the PDS 70 Protoplanetary Disk
Creators: name: Bae, Jaehan
name: Zhu, Zhaohuan
name: Baruteau, Clément
name: Benisty, Myriam
name: Dullemond, Cornelis P.
name: Facchini, Stefano
name: Isella, Andrea
name: Keppler, Miriam
name: Pérez, Laura M.
name: Teague, Richard
Publisher: name: arXiv
Year: 2019
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: While numerical simulations have been playing a key role in the studies of planet-disk interaction, testing numerical results against observations has been limited so far. With the two directly imaged protoplanets embedded in its circumstellar disk, PDS 70 offers an ideal testbed for planet-disk interaction studies. Using two-dimensional hydrodynamic simulations we show that the observed features can be well explained with the two planets in formation, providing strong evidence that previously proposed theories of planet-disk interaction are in action, including resonant migration, particle trapping, size segregation, and filtration. Our simulations suggest that the two planets are likely in 2:1 mean motion resonance and can remain dynamically stable over million-year timescales. The growth of the planets at $10^{-8}-10^{-7}~M_{\rm Jup}~{\rm yr}^{-1}$, rates comparable to the estimates from H$α$ observations, does not destabilize the resonant configuration. Large grains are filtered at the gap edge and only small, (sub-)$μ$m grains can flow to the circumplanetary disks and the inner circumstellar disk. With the sub-millimeter continuum ring observed outward of the two directly imaged planets, PDS 70 provides the first observational evidence of particle filtration by gap-opening planets. The observed sub-millimeter continuum emission at the vicinity of the planets can be reproduced when (sub-)$μ$m grains survive over multiple circumplanetary disk gas viscous timescales and accumulate therein. One such possibility is if (sub-)$μ$m grains grow in size and remain trapped in pressure bumps, similar to what we find happening in circumstellar disks. We discuss potential implications to planet formation in the solar system and mature extrasolar planetary systems.
description: Accepted for publication in ApJL, 15 pages, 8 figures, An animated version of M_c = 2.5 M_Jup model in Figure 1 is temporarily available at http://jaehanbae.com/movies/pds70/
JES-Linkage-Supplemental Text-revision-Fin.docx
Creators: name: Jinjiang Fan
name: Campioli, Enrico
name: Sottas, Chantal
name: Zirkin, Barry
name: Papadopoulos, Vassilios
Publisher: name: figshare
Year: 2019
Subjects: subject: 110306 Endocrinology
subject: FOS: Clinical medicine

description: Amhr2-Cre-mediated global Tspo knockout
Anarsia sibirica Park & Ponomarenko 1996
Creators: name: Junnilainen, Jari
name: Karsholt, Ole
name: Nupponen, Kari
name: Kaitila, Jari-Pekka
name: Nupponen, Timo
name: Olschwang, Vladimir
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Gelechiidae
Anarsia
Anarsia sibirica

description: Anarsia sibirica Park & Ponomarenko, 1996
Figs. 55 & 56
Arkaim 14–19.VI.1996 (5 exx.), 16. VI.1996 (3 exx.), 17.VI.1996 (2 exx.), 08–09.VII.1997; Chalk Hills 03– 07.VI.1998 (ca. 25 exx.), 02.VII.2003 (1♂), 26.V.2004 (1 ex.), 28.V.2004 (6 exx.), 25.IX.2005 (1♂); Guberlja 26. VI.2003 (1♂); Kuvandyk 13–15. VI.1998 (1 ex.), 15. VI.1998 (1 ex.); Kuvandyk II 16. VI.1998 (1 ex.); Moskovo 22–23. VI.1996 (1 ex.); Sakmara river 20–21. VI.1996 (22 exx.); Stepnoe 30. VII.2005 (1 ex.); Verbljushka 30–31.V.1998, 10.VI.1998 (3 exx.), 11.VI.1998 (1 ex.), 18.VI.1999 (2♀), 27.VI.2003 (1♀), 30.V.2004 (2 exx.), 31. V.2004 (6 exx.), 01. VI.2004 (1 ex.). A total of about 80 exx. Genitalia slides: K. Nupponen prep. no. 3/ 19.X.2008 (♂), 1/ 11.XI.2008 (♂). Six further genitalia preparations preserved in glycerol.
 Distribution. Russia (S Ural). Outside Europe known from Southern Siberia (e.g., Altai, Novosibirsk, Minussinsk) (Park & Ponomarenko 1996).
 Remarks. This species is new to Europe. A single, freshly emerged specimen observed in late September represents the second generation. The external appearance of the adult is illustrated here for the first time. The forewing pattern is somewhat variable. Some specimens are rather distinctly mottled with black. Occasionally the spots can be indistinct, and such specimens are easily confused with A. spartiella. However, A. sibirica is smaller and its forewings are less elongated than those of A. spartiella. A. sibirica is widely distributed in various kinds of steppes in eastern and southern parts of the Urals.
description: Published as part of Junnilainen, Jari, Karsholt, Ole, Nupponen, Kari, Kaitila, Jari-Pekka, Nupponen, Timo & Olschwang, Vladimir, 2010, The gelechiid fauna of the southern Ural Mountains, part II: list of recorded species with taxonomic notes (Lepidoptera: Gelechiidae) 2367, pp. 1-68 in Zootaxa 2367 (1) on page 62, DOI: 10.11646/zootaxa.2367.1.1, http://zenodo.org/record/10093655
Nothris verbascella
Creators: name: Junnilainen, Jari
name: Karsholt, Ole
name: Nupponen, Kari
name: Kaitila, Jari-Pekka
name: Nupponen, Timo
name: Olschwang, Vladimir
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Gelechiidae
Nothris
Nothris verbascella

description: Nothris verbascella (Denis & Schiffermüller, 1775)
Chalk Hills 22.VI.1999; Kuvandyk 19.VII.1998, 02.IX.2000; Verbljushka 10.VI.1998, 12.VI.1998, 18.VI.1999, 09.IX.2002, 27.VI.2003. A total of 15 exx.
 Distribution. Widely distributed through Europe, eastwards to S Ural. Outside Europe in C Asia.
description: Published as part of Junnilainen, Jari, Karsholt, Ole, Nupponen, Kari, Kaitila, Jari-Pekka, Nupponen, Timo & Olschwang, Vladimir, 2010, The gelechiid fauna of the southern Ural Mountains, part II: list of recorded species with taxonomic notes (Lepidoptera: Gelechiidae) 2367, pp. 1-68 in Zootaxa 2367 (1) on page 62, DOI: 10.11646/zootaxa.2367.1.1, http://zenodo.org/record/10093655
GLAMpoints: Greedily Learned Accurate Match points
Creators: name: Truong, Prune
name: Apostolopoulos, Stefanos
name: Mosinska, Agata
name: Stucky, Samuel
name: Ciller, Carlos
name: De Zanet, Sandro
Publisher: name: arXiv
Year: 2019
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: We introduce a novel CNN-based feature point detector - GLAMpoints - learned in a semi-supervised manner. Our detector extracts repeatable, stable interest points with a dense coverage, specifically designed to maximize the correct matching in a specific domain, which is in contrast to conventional techniques that optimize indirect metrics. In this paper, we apply our method on challenging retinal slitlamp images, for which classical detectors yield unsatisfactory results due to low image quality and insufficient amount of low-level features. We show that GLAMpoints significantly outperforms classical detectors as well as state-of-the-art CNN-based methods in matching and registration quality for retinal images. Our method can also be extended to other domains, such as natural images. Training code and model weights are available at https://github.com/PruneTruong/GLAMpoints_pytorch.
WHAM Observations of H-alpha from High-Velocity Clouds: Are They Galactic or Extragalactic?
Creators: name: Tufte, S. L.
name: Wilson, J. D.
name: Madsen, G. J.
name: Haffner, L. M.
name: Reynolds, R. J.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: It has been suggested that high velocity clouds may be distributed throughout the Local Group and are therefore not in general associated with the Milky Way galaxy. With the aim of testing this hypothesis, we have made observations in the H-alpha line of high velocity clouds selected as the most likely candidates for being at larger than average distances. We have found H-alpha emission from 4 out of 5 of the observed clouds, suggesting that the clouds under study are being illuminated by a Lyman continuum flux greater than that of the metagalactic ionizing radiation. Therefore, it appears likely that these clouds are in the Galactic halo and not distributed throughout the Local Group.
description: 12 pages, 5 eps figures, accepted for publication in ApJ Letters
Hidden Order in $URu_{2}Si_{2}$: The Need for a Dual Description
Creators: name: Mydosh, J.
name: Chandra, P.
name: Coleman, P.
name: Tripathi, V.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: Motivated by experiment, we argue that the enigmatic hidden order in $URu_2Si_2$ demands a dual description that encompasses both its itinerant and its local aspects. A combination of symmetry considerations and observation allow us to rule out a number of possibilities. The two remaining scenarios, the quadrupolar charge density wave and the orbital antiferromagnet, are discussed and experiments are suggested to select between these proposals.
description: Proceedings of the SCES 2002 conference Krakow, Poland
Cosmetic two-strand twists on fibered knots
Creators: name: Rogers, Carson
Publisher: name: arXiv
Year: 2019
Subjects: subject: Geometric Topology (math.GT)
subject: FOS: Mathematics

description: Let $K$ be a knot in a rational homology sphere $M$. This paper investigates the question of when modifying $K$ by adding $m>0$ half-twists to two oppositely-oriented strands, while keeping the rest of $K$ fixed, produces a knot isotopic to $K$. Such a two-strand twist of order $m$, as we define it, is a generalized crossing change when $m$ is even and a non-coherent band surgery when $m=1$. A cosmetic two-strand twist on $K$ is a non-nugatory one that produces an isotopic knot. We prove that fibered knots in $M$ admit no cosmetic generalized crossing changes. Further, we show that if $K$ is fibered, then a two-strand twist of odd order $m$ that is determined by a separating arc in a fiber surface for $K$ can only be cosmetic if $m=\pm 1$. After proving these theorems, we further investigate cosmetic two-strand twists of odd orders. Through two examples, we find that the second theorem above becomes false if `separating' is removed, and that a key technical proposition fails when the order equals 1. A closer look at an order-one example, an instance of cosmetic band surgery on the unknot, reveals it to be nearly trivial in a sense that we name `weakly nugatory'. We correct the technical proposition to obtain a means of using double branched covers to show that certain band surgeries are weakly nugatory. As an application, we prove that every cosmetic band surgery on the unknot is of this type.
description: 22 pages, 11 figures. This version has been accepted for publication by the Journal of Topology
Nothris lemniscellus
Creators: name: Junnilainen, Jari
name: Karsholt, Ole
name: Nupponen, Kari
name: Kaitila, Jari-Pekka
name: Nupponen, Timo
name: Olschwang, Vladimir
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Gelechiidae
Nothris
Nothris lemniscellus

description: Nothris lemniscellus (Zeller, 1839)
Burannoe 29.VIII.2000; Kuvandyk 02.IX.2000; Moskovo 04.VIII.2000, 26.VIII.2000; Shkunovka 01.IX.2000; Stepnoe 10.VIII.2005; Verbljushka 27–28.VII.2000, 09–10.IX.2002. A total of 20 exx.
 Distribution. Locally in S, C and N Europe to the Ural Mountains and S Siberia.
description: Published as part of Junnilainen, Jari, Karsholt, Ole, Nupponen, Kari, Kaitila, Jari-Pekka, Nupponen, Timo & Olschwang, Vladimir, 2010, The gelechiid fauna of the southern Ural Mountains, part II: list of recorded species with taxonomic notes (Lepidoptera: Gelechiidae) 2367, pp. 1-68 in Zootaxa 2367 (1) on page 62, DOI: 10.11646/zootaxa.2367.1.1, http://zenodo.org/record/10093655
An Anscombean Approach to Animal Agency
Creators: name: Cash, Luke
Publisher: name: Apollo - University of Cambridge Repository
Year: 2019
Subjects: Agency
Action
Animals

description: The ultimate aim of this thesis is to explain how the theory of action found in Anscombe’s Intention can be modified to deliver a plausible account of non-human animal agency (henceforth, animal agency). More specifically, it is an attempt to develop her account in a way that respects the Aristotelian insight that animals act in ways that differ, in certain fundamental respects, from the processes of growth and self-maintenance found in plants, on the one hand, and the self-conscious actions characteristic of mature human beings, on the other. The negative aim is to show that the theory of action that constitutes the received backdrop in the study of animal minds is ill-suited for the task. This is what I call the Standard Approach to Animal Agency and, despite its widespread acceptance in comparative psychology, cognitive ethology, and the philosophy of animal minds, I argue that it faces serious problems. This thesis divides roughly into two halves corresponding to these respective aims. In the first half I argue against the Standard Approach. Amongst other things, I suggest that the theory suffers from a tendency to take the notion of action for granted. The result is an oversimplified metaphysics that is ill-prepared to account for the fact that the activities characteristic of animal life are instrumentally structured processes. In the constructive half of the thesis I develop an Anscombean alternative that takes the structure of action as its starting point. On this view, expressions of animal agency are understood as a distinctive kind of material process. After explaining Anscombe’s account of intentional action, I adapt and develop these ideas into a theory of animal agency.
description: I received financial support from: The benefactors of St John's College Cambridge The Faculty of Philosophy, University of Cambridge The Royal Institute of Philosophy
Additional file 10 of Microbiomes of clownfish and their symbiotic host anemone converge before their first physical contact
Creators: name: Audet-Gilbert Émie
name: François-Étienne, Sylvain
name: Bouslama Sidki
name: Derome Nicolas
Publisher: name: figshare
Year: 2021
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry

description: Additional file 9: Figure S5. Boxplot of Intragroup GUnifrac distances divided timewise. Each experimental condition for both clownfish and anemone has 6 boxplots for each of the sampling times of the experimental design.
Thermodynamic Uncertainty Relation for Arbitrary Initial States
Creators: name: Liu, Kangqiao
name: Gong, Zongping
name: Ueda, Masahito
Publisher: name: arXiv
Year: 2019
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: The thermodynamic uncertainty relation (TUR) describes a trade-off relation between nonequilibrium currents and entropy production and serves as a fundamental principle of nonequilibrium thermodynamics. However, currently known TURs presuppose either specific initial states or an infinite-time average, which severely limits the range of applicability. Here we derive a finite-time TUR valid for arbitrary initial states from the Cramér-Rao inequality. We find that the variance of an accumulated current is bounded by the instantaneous current at the final time, which suggests that ``the boundary is constrained by the bulk". We apply our results to feedback-controlled processes and successfully explain a recent experiment which reports a violation of a modified TUR with feedback control. We also derive a TUR that is linear in the total entropy production and valid for discrete-time Markov chains with non-steady initial states. The obtained bound exponentially improves the existing bounds in a discrete-time regime.
description: 5+8 pages, 3+4 figures. New results added
Precise calibration method for triaxial magnetometers not requiring Earth's field compensation
Creators: name: Zikmund, Ales
name: Janosek, Michal
name: Ulvr, Michal
name: Kupec, Jan
Publisher: name: arXiv
Year: 2019
Subjects: subject: Instrumentation and Detectors (physics.ins-det)
subject: Geophysics (physics.geo-ph)
subject: FOS: Physical sciences

description: A calibration procedure for calibrations of triaxial magnetometers is presented. The procedure uses a triaxial Helmholtz coil system and an Overhauser scalar magnetometer and is performed in the Earth's field range. The triaxial coils are first calibrated with the Overhauser magnetometer, and subsequently, a triaxial magnetometer calibration is performed. As opposed to other calibration approaches, neither Earth's field nulling system nor movements of the magnetometer are needed. A real calibration test was carried out-the extended calibration uncertainty was better than 430 ppm in sensitivity and 0.06° in orthogonality.
Additional file 1 of Public awareness, attitude, and practice regarding food labeling, Alexandria, Egypt
Creators: name: Mehanna, Azza
name: Ashour, Ayat
name: Tawfik Mohamed, Doaa
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: Mental Health

description: Supplementary Material 1
Multiplicity dependence of (multi-)strange hadron production in proton-proton collisions at $\sqrt{s}$ = 13 TeV
Creators: name: ALICE Collaboration
Publisher: name: arXiv
Year: 2019
Subjects: subject: Nuclear Experiment (nucl-ex)
subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: The production rates and the transverse momentum distribution of strange hadrons at mid-rapidity ($\ |y\ | < 0.5$) are measured in proton-proton collisions at $\sqrt{s}$ = 13 TeV as a function of the charged particle multiplicity, using the ALICE detector at the LHC. The production rates of $\rm{K}^{0}_{S}$, $Λ$, $Ξ$, and $Ω$ increase with the multiplicity faster than what is reported for inclusive charged particles. The increase is found to be more pronounced for hadrons with a larger strangeness content. Possible auto-correlations between the charged particles and the strange hadrons are evaluated by measuring the event-activity with charged particle multiplicity estimators covering different pseudorapidity regions. When comparing to lower energy results, the yields of strange hadrons are found to depend only on the mid-rapidity charged particle multiplicity. Several features of the data are reproduced qualitatively by general purpose QCD Monte Carlo models that take into account the effect of densely-packed QCD strings in high multiplicity collisions. However, none of the tested models reproduce the data quantitatively. This work corroborates and extends the ALICE findings on strangeness production in proton-proton collisions at 7 TeV.
description: 36 pages, 14 captioned figures, 4 tables, authors from page 31, published version, figures at http://alice-publications.web.cern.ch/node/5464
The role of translation in keratinocyte cell fate determination.
Creators: name: Lewicka, Aleksandra Jolanta
Publisher: name: Apollo - University of Cambridge Repository
Year: 2019
Subjects: stem cells
progenitors
cancer
epithelium
skin
translation

description: Mammalian epidermis is both maintained and repaired after injury by a population of proliferating progenitor cells localised in the basal layer of the tissue. While progenitor cells normally remain in the basal layer throughout their lifetime, differentiating cells move up the tissue and are eventually shed off, helping to maintain tissue homeostasis. Cultured human keratinocytes generate a range of colony sizes, but can be separated into two groups based on the ratio of outcomes after cell division. On average, ‘balanced’ colonies give rise to equal numbers of proliferative and differentiating cells, whereas ‘expanding’ colonies grow in an exponential manner, with the majority of divisions resulting in the generation of two proliferative daughter cells. Previous work has demonstrated that cells in the middle third of a growing ‘expanding’ colony spontaneously switch their behaviour towards the ‘balanced’ state. Cells are also able to switch back from ‘balanced’ to ‘expanding’ after a scratch injury. These results suggest the existence of a tuneable mechanism determining the fate of proliferative keratinocytes, but the molecular identity of this switch remains unknown. In this thesis I will discuss the potential role of protein translation levels in defining the division outcomes of cultured human keratinocytes. Using a combination of cell imaging and RNA sequencing technologies, I show that the two modes of proliferation produce distinct transcriptional and translational profiles. I am able to distinguish between the ‘balanced’ and ‘expanding’ colonies at a very early stage during colony growth using specific markers for translation and a global transcription marker suggesting a colony’s fate is set early on. Finally, use of RNA interference allowed me to knock-down a specific Eukaryotic translation initiation factor, leading to an apparent switch in the colony’s proliferative potential. This suggests that translation level may actually determine the cell fate of human keratinocytes and is not only a marker of keratinocyte differentiation. Overall, these findings bring us closer to understanding the molecular basis of progenitor fate determination, and may give us insight into how epidermal homeostasis is maintained and how it is modulated in tissue repair and cancer.
description: Wellcome Trust, Medical Research Council
Additional file 1: of Impact of the 23-valent pneumococcal polysaccharide vaccination in pregnancy against infant acute lower respiratory infections in the Northern Territory of Australia
Creators: name: Binks, Michael
name: Moberley, Sarah
name: Balloch, Anne
name: Leach, Amanda
name: Nelson, Sandra
name: Hare, Kim
name: Wilson, Cate
name: Nelson, Jane
name: Morris, Peter
name: Ware, Robert
name: Tang, Mimi
name: Torzillo, Paul
name: Carapetis, Jonathan
name: Mulholland, Kim
name: Andrews, Ross
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Table S1. Timeliness of the routine infant PCV. (DOCX 23 kb)
Translational and Clinical Research Identifies Novel Therapeutic Targets and Surgical Advances in The Modern Management of Breast Cancer
Creators: name: Keelan, Stephen
Publisher: name: Royal College of Surgeons in Ireland
Year: 2025
Subjects: classificationCode: 320226
subject: Surgery
classificationCode: 321104
subject: Cancer therapy (excl. chemotherapy and radiation therapy)

description: Breast cancer is the leading cause of cancer death among women. It is treated using a multidisciplinary approach. Although significant improvements in managing breast cancer have been made, several critical clinical limitations remain. They include the systemic management of breast cancer brain metastasis and the optimal surgical management of axillary lymph node metastasis, both of which represent unmet clinical needs. This thesis addresses two critical issues in managing such patients. Adding value to the scientific literature, we present three therapeutic targets and investigate their impact on the treatment of patients with brain metastatic breast cancer. Secondly, we investigate the optimal management of axillary lymph node metastasis, providing evidence from large patient cohorts and robust systematic reviews that inform the safe de-escalation of axillary surgery in selected patient cohorts.
Rotationally-induced asymmetry in the double-peak lightcurves of the bright EGRET pulsars?
Creators: name: Dyks, J.
name: Rudak, B.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Pulsed emission from the bright EGRET pulsars - Vela, Crab, and Geminga - extends up to 10 GeV. The generic gamma lightcurve features two peaks separated by 0.4 to 0.5 in phase. According to Thompson (2001) the lightcurve becomes asymmetrical above 5 GeV in such a way that the trailing peak dominates over the leading peak. We attempt to interpret this asymmetry within a single-polar-cap scenario. We investigate the role of rotational effects on the magnetic one-photon absorption rate in inducing such asymmetry. Our Monte Carlo simulations of pulsar gamma-ray beams reveal that in the case of oblique rotators with rotation periods of a few millisecond the rotational effects lead to the asymmetry of the requested magnitude. However, the rotators relevant for the bright EGRET pulsars must not have their inclination angles too large in order to keep the two peaks at a separation of 0.4 in phase. With such a condition imposed on the model rotators the resulting effects are rather minute and can hardly be reconciled with the magnitude of the observed asymmetry.
description: 5 pages, 2 figures, latex2e, to appear in the proceedings of the GAMMA 2001 High-Energy Astrophysics Symposium, Baltimore, April 2001
Additional file of Microbiomes of clownfish and their symbiotic host anemone converge before their first physical contact
Creators: name: Audet-Gilbert Émie
name: François-Étienne, Sylvain
name: Bouslama Sidki
name: Derome Nicolas
Publisher: name: figshare
Year: 2021
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry

description: Additional file of Microbiomes of clownfish and their symbiotic host anemone converge before their first physical contact
The SWIRE SIRTF Legacy Program: Studying the Evolutionary Mass Function and Clustering of Galaxies
Creators: name: Franceschini, Alberto
name: Lonsdale, Carol
name: Team, the SWIRE Co-Investigator
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: The SIRTF Wide-area Infrared Extragalactic (SWIRE) survey is a "Legacy Program" using 851 hours of SIRTF observing time to conduct a set of large-area (67 sq. deg. split into 7 fields) high Galactic latitude imaging surveys, achieving 5-sigma sensitivities of 0.45/2.75/17.5 mJy at 24/70/160 micron with MIPS and of 7.3/9.7/27.5/32.5 microJy at 3.6/4.5/5.8/8.0 micron with IRAC. These data will yield highly uniform source catalogs and high-resolution calibrated images, providing an unprecedented view of the universe on co-moving scales up to several hundreds Mpc and to substantial cosmological depths (z\simeq 2.5 for luminous sources). SWIRE will, for the first time, study evolved stellar systems (from IRAC data) versus active star-forming systems and AGNs (from MIPS data) in the same volume, generating catalogues with of order of 2 million infrared-selected galaxies. These fields will have extensive data at other wavebands, particularly in the optical, near-IR and X-rays. SWIRE will provide a complement to smaller and deeper observations in the SIRTF Guaranteed Time and the Legacy Program GOODS, by allowing the investigation of the effect of environment on galaxy evolution. We expand here on capabilities of SWIRE to study with IRAC the evolution of the bright end of the galaxy mass function as a function of cosmic time.
description: 6 pages, Latex, special macros. To appear in the Proceedings of the ESO Workshop "The Mass of Galaxies at Low and High Redshift", R. Bender and A. Renzini Eds., Springer-Verlag Series "ESO Astrophysics Symposia"
A study of succinate dehydrogenase deficient tumourigenesis: From functional assessment of variant pathogenicity to the discovery of new disease biomarkers
Creators: name: Casey, Ruth
Publisher: name: Apollo - University of Cambridge Repository
Year: 2019
Subjects: Phaeochromocytoma
paraganglioma
Succinate dehydrogenase
metabolomics
GIST

description: A loss of function of the citric acid cycle enzyme complex succinate dehydrogenase (SDH) is associated with a predisposition to a spectrum of tumourigenesis including phaeochromocytoma, paraganglioma (1) (PPGL), gastrointestinal stromal tumours (GIST) (2), renal cell carcinoma (RCC) (3) and pituitary adenomas (4). Pathogenic variants in each of the four genes (SDHx) encoding the four sub-components of this complex (SDHA/B/C/D) have been associated with tumourigenesis. Germline pathogenic variants in SDHB account for up to 50% of patients with malignant PPGL and a 5 year survival of less than 50% in those with malignancy (5). Most SDHx variant carriers require life long surveillance for tumour development (6) but predicting malignant disease is challenging and histology is of limited assistance in this prediction. The advent of next generation sequencing (NGS) has been influential in this field of inherited neoplasia allowing more rapid and accurate identification of pathogenic variants in the SDHx genes. However the increased throughput achieved with NGS methodology has yielded more variants of uncertain significance in these genes which require additional assessment. New diagnostic adjuncts such as SDHB immunohistochemistry(7), have provided additional prognostic information and prediction of malignant risk but further biomarkers are needed. Furthermore there is a lack of effective treatments for malignant disease associated with SDHx variants (8) (9). This ‘multi-omics’ investigation has provided new insights into genotype-phenotype correlations in SDH deficient disease and has facilitated the translation of new techniques into clinical utility which will aid SDHx variant interpretation. This study has evaluated novel disease biomarkers and potential therapeutic targets in SDH deficient tumour
description: Health Research Board Ireland, GIST support UK
Statistical hadronization of charmed quarks at SPS and RHIC
Creators: name: Kostyuk, A. P.
Publisher: name: arXiv
Year: 2002
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Production of open and hidden charm hadrons in heavy ion collisions is considered within the statistical coalescence model. The charmed quark-antiquark pairs are assumed to be created at the initial stage of the reaction in hard parton collisions. The number of these pairs is conserved during the evolution of the system. At the hadronization stage, the charmed (anti)quarks are distributed among open and hidden charm hadrons in accordance with the laws of statistical mechanics. The model is in agreement with the experimental data on J/psi to Drell-Yan ratio in Pb+Pb collisions at SPS. This agreement can be reached only if a rather strong enhancement of the open charm production in central Pb+Pb collisions is assumed. A possible mechanism of the charm enhancement is discussed. At the top RHIC energy, the model predicts an increase of J/psi to Drell-Yan ratio in more central nucleus-nucleus collisions with respect to less central ones.
description: Presented at 16th International Conference "Quark Matter", Nantes (France), July 18-24, 2002; 4 pages, LaTeX, 2 PS-figures
Effective mass analysis of Bose-Einstein condensates in optical lattices -- stabilization and levitation
Creators: name: Pu, H.
name: Baksmaty, L. O.
name: Zhang, W.
name: Bigelow, N. P.
name: Meystre, P.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: We investigate the time evolution of a Bose-Einstein condensate in a periodic optical potential. Using an effective mass formalism, we study the equation of motion for the envelope function modulating the Bloch states of the lattice potential. In particular, we show how the negative effective mass affects the dynamics of the condensate.
description: 9 pages, 4 figures