cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
MiAIRR 2.0: "A revision of the Adaptive Immune Receptor Repertoire Minimal Standard featuring a single-cell extension"
Creators: name: Arcila, Francisco
Publisher: name: Zenodo
Year: 2020
Subjects: AIRR
IG
iReceptor
B Cell
TCR

description: High-throughput sequencing of adaptive immune receptor repertoires (AIRR-seq) offers novel insights into the diversity and dynamics of IG and TCR and is becoming routinely used for the study of adaptive immunity. Increasing numbers of researchers around the world are creating and analyzing AIRR-seq data, thereby driving the need for the definition of common methods to annotate, access and share datasets. To address these needs, the AIRR Community was established in 2015 with the goal of making AIRR-seq data FAIR (findable, accessible, interoperable and reusable). Implementing the definitions of the AIRR Community, the “iReceptor plus” platform is under ongoing development to facilitate the storage, integration and controlled sharing of AIRR-seq data. Three working groups of the AIRR Community – Minimal Standards, Data Representation and Common Repository – are currently developing standards and recommendations for metadata annotation, exchange formats and interfaces of a federated database infrastructure, respectively. In 2017, the Minimal Standards Working Group proposed a set of guidelines for AIRR-seq data annotation, provided as a checklist of data elements to include with AIRR study data submissions (MiAIRR). Here we present a revised version (2.0) of MiAIRR, which adds consistent controlled vocabularies and ontologies and introduces keywords to enhance the findability of the datasets, along with numerous minor changes based on the feedback provided by the wider community. Furthermore, MiAIRR 2.0 introduces the single-cell extension (SCXT), which defines key concepts to describe sequencing experiments at the single-cell level. Finally, we present an implementation of the SCXT into the “iReceptor plus” platform via the integration of a REST API for querying single cell data. These new features will expand the capabilities of the previously bulk-sequencing centered MiAIRR data standard to the single-cell level.
Additional file 7: of C-Myc-dependent repression of two oncogenic miRNA clusters contributes to triptolide-induced cell death in hepatocellular carcinoma cells
Creators: name: Li, Shu-Guang
name: Shi, Qian-Wei
name: Yuan, Ling-yan
name: Qin, Li-ping
name: Wang, Yan
name: Miao, Yu-Qing
name: Chen, Zhe
name: Ling, Chang-Quan
name: Qin, Wen-xing
Publisher: name: figshare
Year: 2018
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Virology
subject: Computational Biology

description: Table S3. Clinicopathologic characteristics of HCC subtypes defined by miR-17 expression. (DOC 46Â kb)
Supplementary Material for: Immunohistochemical Glomerular Expression of Phospholipase A2 Receptor in Primary and Secondary Membranous Nephropathy: A Retrospective Study in an Indian Cohort with Clinicopathological Correlations
Creators: name: Roy, S.
name: Korula, A.
name: Basu, G.
name: Jacob, S.
name: Varughese, S.
name: Tamilarasi, V.
Publisher: name: Karger Publishers
Year: 2017
Subjects: Medicine

description: Background: Limited published literature exists on the utility and standardization of anti-phospholipase A2 receptor (anti-PLA2R) immunohistochemistry (IHC) for the diagnosis of primary membranous nephropathy (MN). The study aimed to validate anti-PLA2R IHC for the diagnosis of primary MN and clinicopathological correlations in an Indian cohort. Methods: Subjects included patients with primary and secondary MN diagnosed between January 2012 and August 2014 with an adequate renal biopsy and at least 1 year of clinical follow-up. Anti-PLA2R IHC was performed in all cases with miscellaneous renal lesions as controls. Electron microscopy was performed in selected cases. Sensitivity and specificity of anti-PLA2R IHC to identify primary MN was evaluated. Histopathological analyses of primary and secondary MN were done with clinicopathological correlations including serum creatinine, eGFR, chronic kidney disease stage, 24-h urine protein, serum cholesterol, serum albumin, and hypertension at presentation and follow-up, using the Kruskal-Wallis test and Spearman rank correlation. A p value of ≤0.05 was considered statistically significant. Results: In 153 MN patients (99 primary, 54 secondary) and 37 miscellaneous controls, anti-PLA2R IHC differentiated primary from secondary MN with a sensitivity of 70.2% and a specificity of 96.6%. Secondary MN had increased mesangial matrix expansion compared to primary MN (p = 0.001). Severe nephrotic syndrome, impaired renal function, and hypertension were all more common in primary than in secondary MN. Conclusion: Anti-PLA2R IHC is a specific marker to distinguish primary MN from secondary MN.
Additional file 8: of C-Myc-dependent repression of two oncogenic miRNA clusters contributes to triptolide-induced cell death in hepatocellular carcinoma cells
Creators: name: Li, Shu-Guang
name: Shi, Qian-Wei
name: Yuan, Ling-yan
name: Qin, Li-ping
name: Wang, Yan
name: Miao, Yu-Qing
name: Chen, Zhe
name: Ling, Chang-Quan
name: Qin, Wen-xing
Publisher: name: figshare
Year: 2018
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Virology
subject: Computational Biology

description: Table S4. Clinicopathologic characteristics of HCC subtypes defined by miR-93 expression. (DOC 47Â kb)
Additional file 1: of Azoramide, a novel regulator, favors adipogenesis against osteogenesis through inhibiting the GLP-1 receptor-PKA-Î˛-catenin pathway
Creators: name: Ruan, Banjun
name: Zhu, Zheng
name: Yan, Zhao
name: Yang, Wei
name: Zhai, Dongsheng
name: Wang, Li
name: Ye, Zichen
name: Lu, Huanyu
name: Xiang, An
name: Liang, Jingwei
name: Jiang, Yinghao
name: Xu, Chengming
name: Wang, Zhenyu
name: Wei, Ming
name: Lei, Xiaoying
name: Cao, Xiaorui
name: Lu, Zifan
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Molecular Biology
subject: Pharmacology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Binding Mode Prediction of Azoramide and figure legend of additional file 2. (DOCX 31Â kb)
Carnet nº 28, commencé à Bugel (p. 13)
Creators: name: Péraire, Lucien
name: CNRS
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2023

description: created: 25-3-1932
Additional file 1 of HT-eQTL: integrative expression quantitative trait loci analysis in a large number of human tissues
Creators: name: Li, Gen
name: Jima, Dereje
name: Wright, Fred
name: Nobel, Andrew
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Chemical Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Mental Health
subject: Infectious Diseases
subject: FOS: Health sciences

description: Supplementary material of the HT-eQTL model fitting procedure. (PDF 144 kb)
OSTP-AWhite House Office of Science and Technology Policy Request for Information on the Future of Artificial Intelligence
Creators: name: Kitchen, Kris
Publisher: name: figshare
Year: 2017
Subjects: subject: 100702 Molecular and Organic Electronics
subject: FOS: Nanotechnology
subject: 100505 Microwave and Millimetrewave Theory and Technology
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: 100604 Memory Structures
subject: 100603 Logic Design
subject: 100399 Industrial Biotechnology not elsewhere classified
subject: FOS: Industrial biotechnology

description: White House Office of Science and Technology Policy Request for Information on the Future of Artificial Intelligence
Appendix: further analysis
Creators: name: Jamali, Hamid R.
Publisher: name: figshare
Year: 2017
Subjects: subject: Library and Information Studies
subject: FOS: Media and communications

description: further analysis of the data, authorship and article attributes related to the article: Copyright compliance and infringement in ResearchGate full-text journal articles, http://dx.doi.org/10.1007/s11192-017-2291-4
Additional file 1: of Does feedback on daily activity level from a Smart watch during inpatient stroke rehabilitation increase physical activity levels? Study protocol for a randomized controlled trial
Creators: name: Dong, Yun
name: Steins, Dax
name: Sun, Shanbin
name: Li, Fei
name: Amor, James
name: James, Christopher
name: Xia, Zhidao
name: Dawes, Helen
name: Izadi, Hooshang
name: Cao, Yi
name: Wade, Derick
Publisher: name: figshare
Year: 2018
Subjects: Medicine
Biological Sciences not elsewhere classified
Developmental Biology
Science Policy

description: SPIRIT 2013 Checklist: Recommended items to address in a clinical trial protocol and related documents. (DOCX 118 kb)
Why 5G?
Creators: name: Fontes, Francisco
name: Neokosmidis, Ioannis
name: Trivisonno, Riccardo
name: Davoli, Franco
name: Binh, Le Nguyen
name: Mikroulis, Spiros
name: Tomkos, Ioannis
name: Frascolla, Valerio
Publisher: name: Zenodo
Year: 2018

description: The global society and the worldwide economy are becoming increasingly dependent on information and communication technologies (ICT), especially on wireless connectivity. The recently defined 5G infrastructure, on the verge of being broadly deployed, promises to finally deliver on the long sought-for ubiquitous and always-on connectivity. 5G will allow for new applications and unique service capabilities, not only for consumers but also for new industrial stakeholders, creating new business opportunities and allowing for novel Business to Business to Customers (B2B2C) business models. The society will benefit from the availability of such new services in many tangible different ways. Nonetheless, to make such transformation happen, a larger ecosystem, which merges existing and new ICT stakeholders, as well as different verticals and industries, is needed. Based on an innovative architecture, which can scale and adapt to future needs, and a new radio interface, 5G will provide significantly better performance and new capabilities, mandatory for that transformation to take place.
Background
Creators: name: Otavio Luis Ramos Monteiro
name: Da Costa Correia, Andresa
Publisher: name: OSF Registries
Year: 2023

description: According to the World Health Organization (WHO), palliative care is an approach that improve the quality of life of patients (adults and children) and relatives who face difficult conditions associated to diseases that risk their lives. It encompasses prevention and suffering relief, by early diagnosis, correct clinical staging, pain alleviation as well as relief of other physical, psychological (1) and spiritual (2) problems.
A common complication of patients under palliative care is the anorexia-cachexia syndrome (ACS), caused by the consumption of skeletal muscle and fat mass and by the appetite decrease, causing an important loss of weight which adversely affects the quality of life and decreased survival of patients in advanced cancer stages. The anorexia-cachexia syndrome increases the side effects of the treatment (3) and consequently the morbidity and mortality of those patients. The cachexia is present in different chronic conditions such as cancer (28%-57%), Chronic Cardiac Failure (42%), Chronic Renal Insufficiency (30%-60%) and Chronic Obstructive Pulmonary Disease (27%-35%).
The ACS treatments are based on nutritional support strategies that target prevention and treatment of the nutritional condition, although complete recovery cannot be achieved with nutritional support alone (4).
The megestrol acetate (MA) (17-Hydroxy-6-methylpregna-3,6-diene-3,20-dione) is a synthetic progesterone approved by the food and Drug Administration (FDA) in 2005 to treat cachexia caused by acquired immunodeficiency syndrome (AIDS). The mechanism of action of MA is still unknown, but reported effects are the appetite increase and weight gain diminishing the anorexia.
Although the MA use as appetite stimulant in other chronic diseases that cause anorexia and cachexia, like cancer, is not approved and controversial, in many countries, including Brazil, the MA is registered only as antitumor medication for hormone-dependent cancer.
A systematic review demonstrated that MA improves the appetite and is associated to weight gain in cancer and AIDS and other pathologies (5).
Palliative care is part of the Hospital das Forças Armadas (HFA) services, and the MA inclusion in its formulary is a demand of that sector, to treat anorexia. The inclusion or exclusion of any drug in the HFA formulary must be based in solid evidence of its efficacy and safety, which motivated this review to support the inclusion decision.
Additional file 1: of Differentiation of human induced pluripotent stem cells into nucleus pulposus-like cells
Creators: name: Tang, Ruhang
name: Jing, Liufang
name: Willard, Vincent
name: Wu, Chia-lung
name: Guilak, Farshid
name: Chen, Jun
name: Setton, Lori
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Evolutionary Biology
subject: Developmental Biology

description: Table S1. Presenting source of probe/primers for real-time PCR (18s RNA is control). (DOCX 14 kb)
title: Transcription d'un entretien auprès d’une femme âgée de 36 ans, mère de trois enfants dans la ville de Fès au Maroc
Creators: name: Mahmi, Najah
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2017

description: Source: T-5212
description: L’entretien a été enregistré un mois après l’accouchement du troisième enfant de l’informatrice (une fille). L’informatrice, âgée de 36 ans est femme au foyer. Elle n’a jamais été scolarisée. L’enquêtrice débute l’entretien avec des questions sur les expériences de l’allaitement et de l’accouchement. L’informatrice explique qu’elle a allaité tous ses enfants chaque fois qu’ils en faisaient la demande. C’est une décision qu’elle a prise au cours de ses grossesses car selon elle, l’allaitement maternel est bon pour les nouveau-nés. Son premier enfant a été allaité pendant neuf mois, son deuxième pendant un an et demi et elle souhaite allaiter son dernier enfant pendant deux ans. L’informatrice affirme qu’elle garde un très bon souvenir de l’expérience de l’allaitement. Elle explique ensuite que son troisième enfant lui a été confié dès la naissance, ce qui lui a permis de pouvoir lui donner le sein moins d’une heure après l’accouchement. Cependant, l’informatrice évoque la difficulté de la pratique de l’allaitement, surtout pendant les deux premières semaines. Elle raconte qu’elle a donné exclusivement du lait maternel à son bébé et qu’elle n’a utilisé aucun substitut au colostrum mis à part un peu de tisane quand il a eu des coliques. A propos du colostrum, elle le décrit comme jaunâtre, inodore et plus épais que le lait qui apparaît une ou deux semaines après l’accouchement. Pour l’informatrice, le colostrum est une substance très propre, appétissante et importante pour la santé de l’enfant. Elle considère le colostrum comme du lait mais un lait plus important pour le bien-être du bébé. Sa religion (l’islam) et son entourage sont favorables à l’allaitement maternel. L’enquêtrice demande à l’informatrice ce qu’elle pense de la “parenté de lait”. Cette dernière ne se prononce pas mais dit être contre le co-allaitement. L’informatrice explique qu’elle ne pense pas que le fait que le bébé soit prématuré (ou non) change quelque chose dans le processus de formation du colostrum. Afin de favoriser la montée de lait elle affirme qu’elle n’a fait que suivre un bon régime alimentaire.
Online teaching resource: Creating and using PowerPoint videos
Creators: name: Costello, Shane
Publisher: name: figshare
Year: 2017
Subjects: subject: 130103 Higher Education
subject: FOS: Educational sciences

description: Working document which was originally developed for the Master of Counselling program at Monash University. Step-by-step instructions for creating narrated videos using PowerPoint, uploading to YouTube (private), and displaying in Moodle.
Additional file 2: of Differentiation of human induced pluripotent stem cells into nucleus pulposus-like cells
Creators: name: Tang, Ruhang
name: Jing, Liufang
name: Willard, Vincent
name: Wu, Chia-lung
name: Guilak, Farshid
name: Chen, Jun
name: Setton, Lori
Publisher: name: figshare
Year: 2018
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Developmental Biology
subject: Cancer
subject: Hematology

description: Figure S1. Showing immunofluorescence of sorted T-GFP+ cells promoted to differentiate in culture. (A) Immunocytofluorescence showed the positive expression of CD24 (green) and (B) positive expression of CD239 (red) in sorted T-GFP+ cells when differentiated in monolayer for 12 days using step 1b and step 2 of NPDM protocol. (C) Yellow denotes colocalization of the markers. All cells counterstained with DAPI. Scale bar = 20 Îźm. (DOCX 995 kb)
The effect of surgeon’s preference for hybrid or cemented fixation on the long-term survivorship of total knee replacement
Creators: name: Vertullo, Christopher J
name: Graves, Stephen E
name: Peng, Yi
name: Lewis, Peter L
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Medicine
subject: Infectious Diseases
subject: FOS: Health sciences

description: Background and purpose — Recent direct comparative reports suggest that hybrid fixation may have a similar or superior outcome to cemented fixation in total knee replacement (TKR); however, a paucity of long-term data exists. To minimize the confounders of a direct comparison, we performed an instrumental variable analysis examining the revision rate of 2 cohorts of patients based on their surgeon’s preference for cemented or hybrid fixation. Methods — Registry data were obtained from 1999 until 2015 for 2 cohorts of patients who received minimally stabilized TKR, defined as those treated by high-volume hybrid fixation preferring surgeons, designated routinely hybrid (RH), and those treated by high-volume cemented fixation preferring surgeons, designated routinely cemented (RC). Results — At 13 years, the cumulative percentage revision of the RC cohort was 4.8% (CI 4.1–5.7) compared with 5.5% (CI 3.5–8.7) for the RH cohort. The revision risk for each cohort was the same for all causes (HR =1.0 (CI (0.84–1.20)), non-infective causes, and for infection. This finding was irrespective of patient age or sex, patella resurfacing, and with non-cross-linked polyethylene (NXLPE). The RH cohort who received cross-linked polyethylene (XLPE) had a lower revision risk than the RC cohort with XLPE (HR =0.57 (0.37–0.88), p = 0.01). Interpretation — The risk of revision for the patients of surgeons who prefer cemented fixation in minimally stabilized TKR is the same as for the patients of surgeons who prefer hybrid fixation, except when used with XLPE, where hybrid fixation has a lower revision risk.
Additional file 1: of Heat stress induces spikelet sterility in rice at anthesis through inhibition of pollen tube elongation interfering with auxin homeostasis in pollinated pistils
Creators: name: Zhang, Caixia
name: Li, Guangyan
name: Chen, Tingting
name: Feng, Baohua
name: Fu, Weimeng
name: Yan, Jinxiang
name: Islam, Mohammad
name: Jin, Qianyu
name: Tao, Longxing
name: Fu, Guanfu
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Evolutionary Biology
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Virology

description: Table S1. Primer sequences used in qRT-PCR analysis. (DOCX 33 kb)
Geologische Aspekte und Umfeldanalyse zur überregionalen Rohstoffverfügbarkeit von Beton - Sand, Kalkstein, Gips
Creators: name: Hilgers, Christoph
name: Becker, Ivy
Publisher: name: Karlsruhe
Year: 2020

description: Die hohe Nachfrage an Beton stellt Herausforderungen an die Bauindustrie und Infrastrukturplanung. Dabei kann ein kontinuierlich steigender Bedarf, in Deutschland gleichermaßen wie global, verzeichnet werden, der das Ergebnis einer wachsenden Bevölkerung und steigenden ökonomischen Wohlstandes ist. Die Ausgangsrohstoffe für Beton, wie Kalk- und Tonsteine, Sande und Kiese, sowie Gips und Anhydrit, verzeichnen dabei eine höhere jährliche Wachstumsrate als die steigende Bevölkerung (2,4 % zu 1,2 % in 2017), weshalb Strategien zu einer globalen Sicherung der Bereitstellung geschaffen werden müssen. Aus geologischer Sicht ist keine Limitierung dieser Massenrohstoffe in Sicht, allerdings wird die Verfügbarkeit durch politische, ökonomische, gesetzliche und Umweltaspekte sowie Unterschiede in der regionalen Verteilung begrenzt. Auch in Deutschland sind die Baurohstoffe in abbauwürdigen Mengen vorhanden. Viele dieser Vorkommen sind aber durch vorrangige Flächennutzung verplant oder in privatem Besitz, wodurch es bei steigender Bautätigkeit zu regionaler Rohstoffknappheit kommt, da Neueröffnungen von Abbauflächen oder Erweiterungen langjährige Genehmigungsverfahren mit sich ziehen. In Zukunft werden sich dadurch auch Baurohstoffe verteuern, da lange Transportstrecken bei heutigen Preisen nicht wirtschaftlich sind. Gleichzeitig werden Recycling-Baustoffe eine immer größere Rolle spielen, um der steigenden Nachfrage gerecht zu werden.
Additional file 2 of Inferring RNA sequence preferences for poorly studied RNA-binding proteins based on co-evolution
Creators: name: Yang, Shu
name: Wang, Junwen
name: T. Ng, Raymond
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Molecular Biology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences

description: Supplementary File. The PDF document contains texts for the Supplementary Note, and the Supplementary Figures S1 to S2. Figure S1 shows the PCCs of KH RBP, RRM PWM pairs for 1000 randomly shuffled sets. Figure S2 shows the comparison of the full sequence-and-structure, structure alone, and sequence alone models in KNN-RCK, in terms of their performances in predicting (A) in vitro binding on the InVitro dataset (B) and in vivo binding on the InVivoRay dataset. (PDF 217 kb)
Comment on New formulation of the two body problem using a continued fractional potential.
Creators: name: Hassani, Mohamed Elmansour
Publisher: name: figshare
Year: 2019
Subjects: subject: 20399 Classical Physics not elsewhere classified
subject: FOS: Physical sciences

description: In a relatively recent article by F.A. Abd El-Salam et al. [Astrophys. Space Sci. 350, 507 (2014)], the authors claimed a new formulation of the two-body problem via the introduction of the continued fractional potential. Even if the idea of applying the continued fraction procedure to the gravitational physics is by itself a novelty, the study presented in their work suffers both from some mathematical and physical issues. These issues are discussed in this comment.
MOESM1 of Balanced trafficking between the ER and the Golgi apparatus increases protein secretion in yeast
Creators: name: Bao, Jichen
name: Huang, Mingtao
name: Petranovic, Dina
name: Nielsen, Jens
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 1. Additional table and figures.
Studies on characterization of guava germplasm (.docx
Creators: name: Banoth, Shiva
Publisher: name: figshare
Year: 2017
Subjects: subject: Biotechnology
subject: Molecular Biology
subject: 60309 Phylogeny and Comparative Analysis
subject: FOS: Biological sciences
subject: 60705 Plant Physiology
subject: 60310 Plant Systematics and Taxonomy
subject: 60702 Plant Cell and Molecular Biology

description: Sir, this is under publication. I submitted my research article to tree genetics and genomes journal, the want Data Archiving Statement. In net searched and i got your website. So please hepl me to get Data Archiving Statement for my data
Response to Request for Comment on Draft Desirable Characteristics of Repositories for Managing and Sharing Data Resulting from Federally Funded or Supported Research
Creators: name: Woollard, Matthew
Publisher: name: Zenodo
Year: 2020
Subjects: data sharing, research data management, digital preservation,

description: This is an institutional (UK Data Archive) response to Request for Comment on Draft Desirable Characteristics of Repositories for Managing and Sharing Data Resulting from Federally Funded or Supported Research published in January 2020. It takes each of the proposed characteristics and comments on them.
title: Candidature projet de résidence "Cassis: un Karst à explorer entre arts et sciences" Fondation Camargo 2015
Creators: name: Samuel Bordreuil (MMSH-CNRS); Bryan Connel; Katie Holten; Mariateresa Sartori; Susan Schwartzenberg
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020

description: Candidature pour projet de résidence à la Fondation Camargo, réalisée par Samuel Bordreuil (MMSH-CNRS); Bryan Connel; Katie Holten; Mariateresa Sartori; Susan Schwartzenberg.
Projet en collaboration avec l'équipe Karsteau (Aix-Marseille université); IMBE (UMR 6372).
Additional file 1: of Molecular epidemiology and virulence characteristics of Staphylococcus aureus nasal colonization in medical laboratory staff: comparison between microbiological and non-microbiological laboratories
Creators: name: Xie, Xiaoying
name: Dai, Xinlu
name: Ni, Lijia
name: Chen, Baiji
name: Luo, Zhaofan
name: Yao, Yandan
name: Wu, Xiquan
name: Li, Hongyu
name: Huang, Songyin
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Biotechnology
subject: Evolutionary Biology
subject: Cancer
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Table S1. Spa types and genetic characteristics of select S. aureus isolates recovered from medical laboratory staff. (DOCX 26 kb)
Additional file 1: of Mechanisms of implementing public health interventions: a pooled causal mediation analysis of randomised trials
Creators: name: Lee, Hopin
name: Hall, Alix
name: Nathan, Nicole
name: Reilly, Kathryn
name: Seward, Kirsty
name: Williams, Christopher
name: Yoong, Serene
name: Finch, Meghan
name: Wiggers, John
name: Wolfenden, Luke
Publisher: name: figshare
Year: 2018
Subjects: Medicine
Molecular Biology
Biological Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified
Developmental Biology
Cancer
Science Policy
Virology

description: Cochrane Risk of Bias Assessment. (DOCX 110Â kb)
Report on quality and performance of interpolated BLH retrieval product and cross-validation method
Creators: name: Feist, Dietrich G.
name: Aranda, Juan Antonio Bravo
name: Pietras, Christophe
name: G.Biavati
name: Jérôme, Tarniewicz
Publisher: name: Zenodo
Year: 2015
Subjects: lidar
ceilometer
PBL
BLH

description: One of WP3 objectives is to demonstrate the contribution of lidar equipping ICOS to diagnose boundary layer height (BLH). BLH is a critical variable that defines the dilution of CO2 and CH4, emitted or taken up at the surface, in the atmosphere. Two atmospheric boundary layer retrieval algorithms have been selected in WP3 (PyBL & STRAT), and the choice was made to have them improved by their respective developers (resp. MPG & CNRSLMD) to meet the specific needs of ICOS-INWIRE in terms of BLH restitution and implementation on site in the ICOS network (see MS7, Develop reference implementation for unified pre-processing and BLH retrieval algorithm). It results in two adapted versions (PyBL_ICOS & STRAT+) of original algorithms that are compared to each other in a first part of this deliverable, over a common dataset of measurement, thanks to standard data format for backscatter signals from lidar/ceilometers defined in MS6. Since optical systems will not necessarily be exactly collocated with atmospheric stations in the ICOS network, spatial interpolation of mixing heights is investigated in a second part of this deliverable. Two interpolation schemes (distance-based and geo-statistical) are tested. In particular results of kriging methods with mixing heights from atmospheric model to physically constrain the interpolation are presented. In a last part, quality and performance of BLH retrieval are studied. In particular lidar/ceilometer sensitivity for BLH retrieval is addressed, and cross validation of BLH retrievals by ceilometers versus micro wave radiometer and radiosondes mixing heights is shown.
Additional file 2: of Molecular epidemiology and virulence characteristics of Staphylococcus aureus nasal colonization in medical laboratory staff: comparison between microbiological and non-microbiological laboratories
Creators: name: Xie, Xiaoying
name: Dai, Xinlu
name: Ni, Lijia
name: Chen, Baiji
name: Luo, Zhaofan
name: Yao, Yandan
name: Wu, Xiquan
name: Li, Hongyu
name: Huang, Songyin
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Table S2. The resistance rate to 14 antibiotics of 87Â S. aureus isolates. (DOCX 20 kb)
Additional file 2: of Mechanisms of implementing public health interventions: a pooled causal mediation analysis of randomised trials
Creators: name: Lee, Hopin
name: Hall, Alix
name: Nathan, Nicole
name: Reilly, Kathryn
name: Seward, Kirsty
name: Williams, Christopher
name: Yoong, Serene
name: Finch, Meghan
name: Wiggers, John
name: Wolfenden, Luke
Publisher: name: figshare
Year: 2018
Subjects: Medicine
Biological Sciences not elsewhere classified
Developmental Biology
Cancer
Science Policy

description: School survey questions and modified questions. (DOCX 35Â kb)
Additional file 1: of The fundamental association between mental health and life satisfaction: results from successive waves of a Canadian national survey
Creators: name: Lombardo, Patrick
name: Jones, Wayne
name: Wang, Liangliang
name: Shen, Xin
name: Goldner, Elliot
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy
subject: Hematology
subject: Computational Biology

description: Table S1. Life satisfaction mean score and 95% confidence interval for each age category. Table S2. Life satisfaction mean score and 95% confidence interval for each province or territory category. Table S3. Odds ratios of the factors associated with life satisfaction. Table S4. Sensitivity analysis: odds ratios of the factors associated with life satisfaction. (DOCX 44 kb)
Patient safety and interprofessional education: A report of key issues from two interprofessional workshops
Creators: name: Anderson, Elizabeth S.
name: Gray, Richard
name: Price, Kim
Publisher: name: Taylor & Francis
Year: 2017
Subjects: subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: This article presents the outcomes of two workshops which explored historical and recent issues on patient safety that directly relate to leaders in the interprofessional field. The article considers the impact of flattened team-based structures where collaborative working constantly considers safe patient-centred high-quality care. These issues are mainly rooted in changes within a UK context, but the historical case studies present situations which could enlighten and enliven discussions of patient safety in an international context. The article was sparked by discussion of recurrent themes in healthcare that have undermined the abilities of medical practitioners to adequately manage hazard in clinical care settings throughout modern history. Examining the issues that confront healthcare practitioners and care workers in their dealings with patients and clients, such as the aged or the severely disabled, can reveal commonalities across global healthcare settings, in the past and present, that provide a useful tool in facilitating the goals of interprofessional education (IPE). The potential of IPE has links to both how professionals respond together to care situations and involve the general public in shared health understandings. The outcomes focus on how to ensure ministrations where optimal team-based collaborative care is recognised and constantly sought. We conclude that IPE has much to offer in this arena and more evidence of impact here is well worth pursuing.
Некоторые особенности процедуры судебного следствия c участием присяжных заседателей
Creators: name: Павел Александрович ЛУЦЕНКО
name: Игорь Львович МАХОРКИН
Publisher: name: Закон и право
Year: 2020
Subjects: суд присяжных
судебное следствие
состязательность
вердикт присяжных заседателей
исследование доказательств

description: В статье рассматриваются детерминирующие признаки судебного следствия c участием присяжных заседателей, которые обусловлены спецификой состава суда, а также более высоким уровнем реализации состязательных начал судебного разбирательства, необходимостью обеспечения познавательной доступности обстоятельств уголовного дела и рядом других факторов
Additional file 3: of Mechanisms of implementing public health interventions: a pooled causal mediation analysis of randomised trials
Creators: name: Lee, Hopin
name: Hall, Alix
name: Nathan, Nicole
name: Reilly, Kathryn
name: Seward, Kirsty
name: Williams, Christopher
name: Yoong, Serene
name: Finch, Meghan
name: Wiggers, John
name: Wolfenden, Luke
Publisher: name: figshare
Year: 2018
Subjects: Molecular Biology
Biological Sciences not elsewhere classified
Developmental Biology
Cancer
Science Policy
Virology
Computational Biology

description: Sensitivity analysis using multiple imputation to replace missing values. (DOCX 17Â kb)
Об обеспечении прав подозреваемого в ходе досудебного производства
Creators: name: Хадижат Гасановна ДАЦИЕВА
name: Аделя Рафиковна АГАСИЕВА
Publisher: name: Закон и право
Year: 2020
Subjects: подозреваемый
обеспечение прав подозреваемого
задержание
следственные действия
допрос.

description: Значительная часть нарушений прав подозреваемого происходит на стадии уголовного преследования лиц, подозреваемых в совершении преступления, и связана с недостаточным регулированием деятельности сторон, в частности, в области уголовного преследования и процессуального задержания лица, подозреваемого в совершении преступлений против основ конституционного строя и безопасности государства. В статье рассматриваются основания для задержания подозреваемого и выявляются проблемы, связанные с осуществлением прав подозреваемого во время его задержания; излагаются некоторые меры, направленные на обеспечение прав подозреваемого при задержании и при его допросе.
Оценка достаточности доказательств судом при постановлении оправдательного приговора ввиду непричастности подсудимого к совершению преступления
Creators: name: Артем Андреевич СИНИЦЫН
Publisher: name: Закон и право
Year: 2020
Subjects: оправдательный приговор
основания постановления оправдательного приговора
непричастность подсудимого к совершению преступления
оценка достаточности доказательств в уголовном процессе.

description: В данной статье автор рассматривает проблемные вопросы оценки достаточности доказательств судом при постановлении оправдательного приговора ввиду непричастности подсудимого к совершению преступления.
Turri et al, Direct+Plus coordination
Creators: name: Szecsi, Peter
name: Nandor Hajdu
name: Marton Kovacs
name: Aczel, Balazs
Publisher: name: OSF Registries
Year: 2019
Subjects: CREP

description: if you are planning to conduct a Direct+Plus replication, please check this page to determine if someone else is asking a similar question. Multiple locations studying the same moderators make for stronger inference
CREP Direct Replication of Turri et al (2015): Statistics Support
Creators: name: Szecsi, Peter
name: Marton Kovacs
name: Aczel, Balazs
name: Nandor Hajdu
Publisher: name: OSF Registries
Year: 2019
Subjects: CREP
Epistemic Intuitions
Folk Epistemology
Justified True Belief
Knowledge
Replication

description: Here you can find materials that will help you analyze Turri et al (2015) direct replication data in R or SPSS.
Supplementary Material for: Meta-Analysis of the Risk of Subsequent Mood Episodes in Bipolar Disorder
Creators: name: Radua, J.
name: Grunze, H.
name: Amann, B.L.
Publisher: name: Karger Publishers
Year: 2017
Subjects: Medicine

description: Background: Reported relapse and recurrence rates in bipolar disorder (BD) differ significantly between studies. Most data originate from highly selective patients participating in sponsored randomized controlled trials with narrow inclusion criteria. To estimate the true risk of a subsequent mood episode (SME) under real-world conditions, we conducted a meta-analysis of rates of SME as reported in naturalistic BD studies. Methods: PubMed, ScienceDirect, Scopus, and Web of Knowledge were searched until July 2015. Studies reporting the time until the emergence of an SME, from which individual data or Kaplan-Meier plots with censors marked could be retrieved, were included. Results: Twelve studies comprising 5,837 patients met the inclusion criteria. The median time to an SME in adults after an index episode was 1.44 years. The risk of an SME was 44% during the first year. Not having a SME during this first year lowered this risk to 19% in the second year. The risk was higher in bipolar II disorder (BD-II) than in bipolar I disorder (BD-I; HR = 1.5). In BD-I, the risk of a subsequent manic, mixed, or depressive mood episode was higher after an index episode of the same polarity (HR = 1.89-5.14). The overall risk of an SME was higher in patients with persisting subsyndromal symptoms (HR = 2.17). Conclusions: The data from this study provide a more reliable estimate of the risk of an SME in BD in real-world settings. Further research into the longitudinal course of BD-II is warranted to confirm its role as a risk factor for SME.
Концепция состязательности и равноправия сторон как конституционный принцип судопроизводства в Российской Федерации
Creators: name: Рамазан Алиевич АЛИЕВ
Publisher: name: Закон и право
Year: 2020
Subjects: конституция
состязательность
равноправие сторон
процессуальные принципы

description: В данной статье рассматривается общепроцессуальный принцип состязательности и равноправия сторон в рамках уголовного судопроизводства. Раскрываются понятие и содержание принципа состязательности и равноправия сторон в уголовном процессе, а также его значение
Supplementary Material for: Conditioning Immune and Endocrine Parameters in Humans: A Systematic Review
Creators: name: Tekampe, J.
name: Van Middendorp, H.
name: Meeuwis, S.H.
name: J.W.R., Van Leusden
name: Pacheco-López, G.
name: Hermus A.R.M.M.
name: Evers A.W.M.
Publisher: name: Karger Publishers
Year: 2017
Subjects: Medicine

description: Background: Conditioned pharmacological effects may provide relevant clinical opportunities to improve treatment for patients with a variety of conditions. The aim of this systematic review was to create an overview of studies in this field of research and to investigate whether specific characteristics of the study design make for successful conditioning. Methods: The protocol of this review was registered in Prospero (PROSPERO 2015: CRD42015024148). A systematic literature search was conducted in the databases PubMed, Embase, and PsychInfo. Studies were included if they were placebo-controlled trials in humans in which the effects of a pharmacological agent on immune or endocrine outcomes (e.g., interleukin-2 and cortisol) were conditioned, using a specific conditioned stimulus. The risk of bias of each study was assessed using the Cochrane risk-of-bias tool. Results: The final selection included 16 studies. Overall, those studies indicate that conditioning of immunosuppression, conditioning of allergic responses, and conditioning of insulin and glycemic responses is possible. Regarding immunostimulants, antiallergic effects, and cortisol conditioning, the preliminary results are promising, but additional studies are needed. Conclusions: This systematic review shows classical conditioning of immune and endocrine responses for various pharmaceutical substances. The studies reviewed here indicate that the number of acquisition and evocation sessions, and characteristics of the unconditioned and conditioned stimuli, are important determinants of the effectiveness of pharmacological conditioning on immune and endocrine parameters. In the future, conditioned pharmacological effects may be used clinically as adjunct therapy in various patient populations.
Additional file 1: of Molecular mechanisms of an antimicrobial peptide piscidin (Lc-pis) in a parasitic protozoan, Cryptocaryon irritans
Creators: name: Chen, Ruanni
name: Mao, Yong
name: Wang, Jun
name: Liu, Min
name: Qiao, Ying
name: Zheng, Libing
name: Su, Yongquan
name: Ke, Qiaozhen
name: Zheng, Weiqiang
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Physical Sciences not elsewhere classified
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Cancer
subject: Virology

description: Primer sets used in RT qPCR validation. (DOCX 14 kb)
Понятие принципов уголовного процесса и их значение
Creators: name: Сейфедин Абдулазизович МИСПАХОВ
Publisher: name: Закон и право
Year: 2020
Subjects: понятие принципов уголовного процесса
значение принципов уголовного процесса
признаки принципов уголовного процесса

description: Статья посвящена определению понятия принципов уголовного процесса и их значению
Институты гарантий и ответственности в контексте их значения для обеспечения выполнения международных договоров
Creators: name: Ахмед Муслимович ИБРАГИМОВ
Publisher: name: Закон и право
Year: 2020
Subjects: право
международное право
международные правовые гарантии
международные обязательства
ответственность в международном праве

description: Международное право обладает дополнительными средствами, при помощи которых оно добивается обеспечения своих норм. Такие юридические средства находятся между собой в системной связи, что не исключает их концептуального сходства и различия. Это, например, характерно для сравнительного анализа международно-правовых гарантий и института ответственности в международном праве.
Организационные основы противодействия коррупции в деятельности уголовно-исполнительных инспекций
Creators: name: Александр Николаевич ДУДУС
name: Леонид Николаевич ТАРАБУЕВ
Publisher: name: Закон и право
Year: 2020
Subjects: уголовно-исполнительная инспекция
коррупция
пенитенциарная антикоррупционная культура
сотрудник
коррупционные проявления
противодействие коррупции

description: В статье на основе анализа официальных данных и результатов проведенного исследования обозначаются основные коррупционные угрозы, возникающие в деятельности уголовно-исполнительных инспекций. Авторы определяют функциональные обязанности сотрудников инспекций, наиболее подверженных коррупционным проявлениям. Формулируют некоторые предложения организационного характера, направленные на обеспечение противодействия коррупции в деятельности уголовно-исполнительных инспекций. Делают вывод о том, что в числе первоочередных мероприятий в области противодействия коррупционным проявлениям со стороны сотрудников уголовно-исполнительных инспекций необходимо признать совершенствование нормативной правовой базы, прежде всего ведомственной. В статье подчеркивается, что существующий широкий перечень мер противодействия коррупции эффективно применяется руководством ФСИН России.
Circular Economy Platforms: Enablers and Organizers of Economic and Environmental Value Creation in the Circular Economy
Creators: name: Blackburn, Outi
Publisher: name: RMIT University
Year: 2024
Subjects: classificationCode: 350705
subject: Innovation management

description: The transition from the traditional linear economy model to the circular economy (CE) has been designed to transform global production/service-consumption cycles into more sustainable ones. However, the transition has been incremental, and a better understanding of enablers and accelerators of economic and environmental value creation in the CE are needed. To shift a model of the economy from linear to circular, all levels, and actors of the socioeconomic system, from individual consumers to organizations and institutions, should participate in the new economic activities. Digital platforms' adaptable technological architecture and matching capabilities have enabled the development of circular resource and service markets. Therefore, platforms have become important elements in enabling the resource circulation and the implementation of new circular business models. However, regardless of the rapid platform-based market development, the academic literature and theory building regarding platforms as the CE transition enablers remain in infancy. Therefore, this dissertation investigates how platforms facilitate economic and environmental value creation in the CE context and accelerate the circular transition.

Based on qualitative research, this dissertation combines a systematic literature review and two multiple case studies of 20 firms in Europe. This study's findings construct a conceptual and thematic map of contemporary CE platform research and empirically identify the key socio-technological enablers and meta-organizational mechanisms that support the economic and environmental value creation in the CE. Additionally, the platform-enabled circular business models are conceptualized as the CE platforms. Overall, this dissertation contributes to and advances the contemporary platform and CE streams of literature by explaining how CE platforms can be used to enable and organize CE activities. For managers, the dissertation provides actionable strategies for implementing platform-enabled circular business models.