cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
title: ADCO, Septième cartulaire de Saint-Étienne de Dijon (1661-1665), Cart. 29 (G 134), 996 folios, f. 0400
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: cartulaire

description: Septième cartulaire de Saint-Étienne de Dijon (1661-1665), Archives départementales de la Côte-d'Or, Cart. 29 (G 134), 996 folios, f. 0400, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Septième cartulaire de Saint-Étienne de Dijon (1661-1665), Archives départementales de la Côte-d'Or, Cart. 29 (G 134), 996 folios, f. 0400, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https://manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
Additional file 1 of Varying levels of natural light intensity affect the phyto-biochemical compounds, antioxidant indices and genes involved in the monoterpene biosynthetic pathway of Origanum majorana L.
Creators: name: Hashemifar, Zahra
name: Sanjarian, Forough
name: Naghdi Badi, Hassanali
name: Mehrafarin, Ali
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Plant Biology

description: Supplementary Material 1.
Investigation of the selectivity of one type of small-molecule inhibitor for three Nav channel isoforms based on the method of computer simulation
Creators: name: Zhao, Fan
name: Jin, Wei
name: Ma, Lin
name: Zhang, Jian-Ye
name: Wang, Jin-Long
name: Zhang, Jing-Hai
name: Song, Yong-Bo
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Biophysics
subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Cell Biology
subject: Molecular Biology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Voltage-gated sodium (Nav) channels play a pivotal role for the changes in membrane potential and belong to large membrane proteins that compose four voltage sensor domains (VSD1–4). In this study, we describe the binding mode and selectivity of one of the aryl sulfonamide sodium channel inhibitors, PF-04856264, for the VSD4s in Nav1.4, Nav1.5 and Nav1.7, respectively, through molecular dynamics simulation and enhanced post-dynamics analyses. Our results show that there are three binding site regions (BSR1–3) in the combination of the ligand and receptors, of which BSR1 and BSR3 contribute to the selectivity and affinity of the ligand to the receptor. What’s more, the 39th residue (Y39 in VSD4hNav1.4/ VSD4hNav1.7 and A39 in VSD4hNav1.5) and N42 in BSR1, the 84th residue (L84 in VSD4hNav1.4, T84 in VSD4hNav1.5, and M84 in VSD4hNav1.7) in BSR2 and the conserved positive charged residues in BSR3 have major contributions to the interaction between the ligand and receptor. Further analysis reveals that if the 39th residue has a benzene ring structure, the connection of BSR1 and the ligand would be much stronger through π-stacking interaction. On the other hand, the strength and number of the hydrogen bonds formed by the ligand and the conserved arginines on S4 determine the contribution of BSR3 to the total free binding energy. We anticipate this study pave the way for the design of more effective and safe treatment for pain that selectively target Nav1.7.
Investigation of the selectivity of one type of small-molecule inhibitor for three Nav channel isoforms based on the method of computer simulation
Creators: name: Zhao, Fan
name: Jin, Wei
name: Ma, Lin
name: Zhang, Jian-Ye
name: Wang, Jin-Long
name: Zhang, Jing-Hai
name: Song, Yong-Bo
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Biophysics
subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Cell Biology
subject: Molecular Biology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Voltage-gated sodium (Nav) channels play a pivotal role for the changes in membrane potential and belong to large membrane proteins that compose four voltage sensor domains (VSD1-4). In this study we describe the binding mode and selectivity of one of the aryl sulfonamide sodium channel inhibitors, PF-04856264, for the VSD4s in Nav1.4, Nav1.5 and Nav1.7, respectively, through molecular dynamics simulation and enhanced post-dynamics analyses. Our results show that there are three binding site regions (BSR1-3) in the combination of the ligand and receptors, of which BSR1 and BSR3 contribute to the selectivity and affinity of the ligand to the receptor. What’s more, the 39th residue (Y39 in VSD4hNav1.4/ VSD4hNav1.7 and A39 in VSD4hNav1.5) and N42 in BSR1, the 84th residue (L84 in VSD4hNav1.4, T84 in VSD4hNav1.5 and M84 in VSD4hNav1.7) in BSR2 and the conserved positive charged residues in BSR3 have major contributions to the interaction between the ligand and receptor. Further analysis reveals that if the 39th residue has a benzene ring structure, the connection of BSR1 and the ligand would be much stronger through π-stacking interaction. On the other hand, the strength and number of the hydrogen bonds formed by the ligand and the conserved arginines on S4 determine the contribution of BSR3 to the total free binding energy. We anticipate this study pave the way for the design of more effective and safe treatment for pain that selectively target Nav1.7.
Morphometry and growth of sea pen species from dense habitats in the Gulf of St. Lawrence, eastern Canada
Creators: name: F.J. Murillo
name: B.W. MacDonald
name: E. Kenchington
name: S.E. Campana
name: B. Sainte-Marie
name: M. Sacau
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: Marine Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: We examined four species of sea pen (Anthoptilum grandiflorum, Halipteris finmarchica, Pennatula aculeata and Pennatula grandis) collected from the Gulf of St. Lawrence and mouth of the Laurentian Channel, eastern Canada. An exponential length–weight relationship was found for all four species, where growth in weight was progressively greater than growth in length with increasing colony size. Halipteris finmarchica, P. grandis and P. aculeata presented the better allometric fits, explaining over 80% of the variance. In addition, a count of growth increments visible in transverse sections in 86 A. grandiflorum and 80 P. aculeata samples was made. Presumed ages ranged between 5 and 28 years for A. grandiflorum and 2 and 21 years for P. aculeata. Radiocarbon assays were inconclusive and could not be used to confirm these ages; further age validation is required. Radial growth of the rod is slow during the first years, increasing at intermediate sizes of the colony and slowing down again for large colonies. Similar results were obtained from the relationship between colony length and number of growth increments where a logistic model was the best fit to the data. On average Spearman’s rank correlations showed 11% of shared variance between sea pen length or weight and environmental variables. Bottom temperature and salinity, depth and summer primary production were significantly correlated to sea pen size for most species.
title: ADCO, Cartulaire général de Cîteaux, dit de Jean de Cirey, (XVe siècle), tome III, Cart. 187 (11 H 72), f. 0070v
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: cartulaire

description: Cartulaire général de Cîteaux, dit de Jean de Cirey, (XVe siècle), tome III, Archives départementales de la Côte-d'Or, Cart. 187 (11 H 72), f. 0070v, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire général de Cîteaux, dit de Jean de Cirey, (XVe siècle), tome III, Archives départementales de la Côte-d'Or, Cart. 187 (11 H 72), f. 0070v, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
Basella alba Linnaeus 1753
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Caryophyllales
Basellaceae
Basella
Basella alba

description: Basella rubra Linnaeus, Species Plantarum 1: 272. 1753.
"Habitat in India." RCN: 2170.
 Lectotype (Verdcourt in Milne-Redhead & Polhill, Fl. Trop. E. Africa, Basellaceae: 2. 1968): Herb. Hermann 5: 207, No. 119 [icon] (BM).
 Generitype of Basella Linnaeus (vide Hitchcock, Prop. Brit. Bot.: 143. 1929).
 Current name: Basella alba L. (Basellaceae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part B), pp. 343-369 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 346, DOI: 10.5281/zenodo.291971
Additional file 1 of Face and content validity of the EMPOWER-UP questionnaire: a generic measure of empowerment in relational decision-making and problem-solving
Creators: name: Marqvorsen, Emilie Haarslev Schröder
name: Lund, Line
name: Biener, Sigrid Normann
name: Due-Christensen, Mette
name: Husted, Gitte R.
name: Jørgensen, Rikke
name: Mathiesen, Anne Sophie
name: Olesen, Mette Linnet
name: Petersen, Morten Aagaard
name: Pouwer, François
name: Rasmussen, Bodil
name: Rothmann, Mette Juel
name: Thomsen, Thordis
name: Winkley, Kirsty
name: Zoffmann, Vibeke
Publisher: name: figshare
Year: 2024
Subjects: Biological Sciences not elsewhere classified
Science Policy

description: Additional file 1.
Additional file 2 of A meta-analysis of the reproducibility of food frequency questionnaires in nutritional epidemiological studies
Creators: name: Cui, Qi
name: Xia, Yang
name: Wu, Qijun
name: Chang, Qing
name: Niu, Kaijun
name: Zhao, Yuhong
Publisher: name: figshare
Year: 2021
Subjects: subject: Space Science
subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Additional file 2 Supplemental Table 1. The overview of the retrieved studies assessing the reproducibility of FFQs.
Tensor network method for reversible classical computation
Creators: name: Yang, Zhi-Cheng
name: Kourtis, Stefanos
name: Chamon, Claudio
name: Mucciolo, Eduardo R.
name: Ruckenstein, Andrei E.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Data Structures and Algorithms (cs.DS)
subject: Computational Physics (physics.comp-ph)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: We develop a tensor network technique that can solve universal reversible classical computational problems, formulated as vertex models on a square lattice [Nat. Commun. 8, 15303 (2017)]. By encoding the truth table of each vertex constraint in a tensor, the total number of solutions compatible with partial inputs/outputs at the boundary can be represented as the full contraction of a tensor network. We introduce an iterative compression-decimation (ICD) scheme that performs this contraction efficiently. The ICD algorithm first propagates local constraints to longer ranges via repeated contraction-decomposition sweeps over all lattice bonds, thus achieving compression on a given length scale. It then decimates the lattice via coarse-graining tensor contractions. Repeated iterations of these two steps gradually collapse the tensor network and ultimately yield the exact tensor trace for large systems, without the need for manual control of tensor dimensions. Our protocol allows us to obtain the exact number of solutions for computations where a naive enumeration would take astronomically long times.
description: Updated version with more careful discussions on the distribution of bond dimensions over random instances, as well as distinguishing between average versus typical behavior. 13.5 pages, 13 figures
$\mathcal{R}(D^{(*)})$ anomalies in light of Non-Minimal Universal Extra Dimension
Creators: name: Biswas, Aritra
name: Patra, Sunando Kumar
name: Shaw, Avirup
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: We estimate contributions from Kaluza-Klein excitations of gauge bosons and physical charge scalar for the explanation of the lepton flavor universality violating excess in the ratios $\mathcal{R}(D)$ and $\mathcal{R}(D^*)$ in 5 dimensional Universal Extra Dimensional scenario with non-vanishing boundary localized terms. This model is conventionally known as non-minimal Universal Extra Dimensional model. We obtain the allowed parameter space in accordance with constraints coming from $B_c \to τν$ decay, as well as those from the electroweak precision tests.
description: 14 pages, 7 captioned figures, Some clarifications and corrections added (Version accepted in PRD)
Madhuca longifolia J. F. Macbr.
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Ericales
Sapotaceae
Madhuca
Madhuca longifolia

description: Bassia longifolia Linnaeus, Mantissa Plantarum Altera: 563. 1771.
"Habitat in Malabaria." RCN: 3428.
 Lectotype (Pennington in Jarvis & al., Regnum Veg. 127: 23. 1993): Herb. Linn. No. 610.1 (LINN).
 Generitype of Bassia Linnaeus (1771), nom. illeg., non All. (1766).
 Current name: Madhuca longifolia (L.) J.F. Macbr. (Sapotaceae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part B), pp. 343-369 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 346, DOI: 10.5281/zenodo.291971
Faster ticking rate of the epigenetic clock is associated with faster pubertal development in girls
Creators: name: Binder, Alexandra M.
name: Corvalan, Camila
name: Mericq, Verónica
name: Pereira, Ana
name: Santos, José Luis
name: Horvath, Steve
name: Shepherd, John
name: Michels, Karin B.
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Epigenetic age is an indicator of biological aging, capturing the impact of environmental and behavioral influences across time on cellular function. Deviance between epigenetic age and chronological age (AgeAccel) is a predictor of health. Pubertal timing has similarly been associated with cancer risk and mortality rate among females. We examined the association between AgeAccel and pubertal timing and adolescent breast composition in the longitudinal Growth and Obesity Cohort Study. AgeAccel was estimated in whole blood using the Horvath method at breast Tanner 2 (B2) and 4 (B4). Total breast volume, absolute fibro-glandular volume (FGV), and %FGV were evaluated at B4 using dual X-ray absorptiometry. The impact of AgeAccel (mean: 0; SD: 3.78) across puberty on the time to breast development (thelarche), menarche, and pubertal tempo (thelarche to menarche) was estimated using accelerated failure time models; generalized estimating equations were used to evaluate associations with breast density. A five-year increase in average adolescent AgeAccel was associated with a significant decrease in time to menarche [hazard ratio (HR): 1.37; 95% confidence interval (CI): 1.04, 1.80] adjusting for birth weight, maternal pre-pregnancy body mass index, maternal height, maternal education, B2 height, fat percentage, and cell composition. AgeAccel displayed a stronger inverse association with pubertal tempo (HR: 1.48; 95% CI: 1.10, 1.99). A five-year increase in AgeAccel was associated with 5% greater %FGV, adjusting for B4 percent body fat, and maternal traits (95% CI: 1.01, 1.10). Our study provides unique insight into the influence of AgeAccel on pubertal development in girls, which may have implications for adult health.
Massive post-starburst galaxies at z > 1 are compact proto-spheroids
Creators: name: Almaini, Omar
name: Wild, Vivienne
name: Maltby, David T.
name: Hartley, William G.
name: Simpson, Chris
name: Hatch, Nina A.
name: McLure, Ross J.
name: Dunlop, James S.
name: Rowlands, Kate
Publisher: name: arXiv
Year: 2017
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We investigate the relationship between the quenching of star formation and the structural transformation of massive galaxies, using a large sample of photometrically-selected post-starburst galaxies in the UKIDSS UDS field. We find that post-starburst galaxies at high-redshift ($z>1$) show high Sérsic indices, significantly higher than those of active star-forming galaxies, but with a distribution that is indistinguishable from the old quiescent population. We conclude that the morphological transformation occurs before (or during) the quenching of star formation. Recently quenched galaxies are also the most compact; we find evidence that massive post-starburst galaxies (M$_{\ast}> 10^{10.5} ~$M$_{\odot}$) at high redshift ($z>1$) are on average smaller than comparable quiescent galaxies at the same epoch. Our findings are consistent with a scenario in which massive passive galaxies are formed from three distinct phases: (1) gas-rich dissipative collapse to very high densities, forming the proto-spheroid; (2) rapid quenching of star formation, to create the "red nugget" with post-starburst features; (3) a gradual growth in size as the population ages, perhaps as a result of minor mergers.
description: 12 pages, 10 figures, published in MNRAS. References corrected and updated to match journal article
Additional file 2 of Face and content validity of the EMPOWER-UP questionnaire: a generic measure of empowerment in relational decision-making and problem-solving
Creators: name: Marqvorsen, Emilie Haarslev Schröder
name: Lund, Line
name: Biener, Sigrid Normann
name: Due-Christensen, Mette
name: Husted, Gitte R.
name: Jørgensen, Rikke
name: Mathiesen, Anne Sophie
name: Olesen, Mette Linnet
name: Petersen, Morten Aagaard
name: Pouwer, François
name: Rasmussen, Bodil
name: Rothmann, Mette Juel
name: Thomsen, Thordis
name: Winkley, Kirsty
name: Zoffmann, Vibeke
Publisher: name: figshare
Year: 2024
Subjects: Biological Sciences not elsewhere classified
Science Policy

description: Additional file 2. Figure S2. Items evaluated by the expert panel and healthcare users in cognitive interviews. Note: Squares represent modifications to item content, circles represent item elimination, and an asterisk represents negative-to-positive modification to final draft wording. Final draft items (d1-36) were cross translated into English after round 8 of Danish cognitive interviews. For publication purposes only, all preliminary items were translated into English by a single translator. Abbreviations: E, expert panel, T, translation.
Imaging Spectroscopy of Type U and J Solar Radio Bursts with LOFAR
Creators: name: Reid, Hamish A. S.
name: Kontar, Eduard P.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: Radio U-bursts and J-bursts are signatures of electron beams propagating along magnetic loops confined to the corona. The more commonly observed type III radio bursts are signatures of electron beams propagating along magnetic loops that extend into interplanetary space. Given the prevalence of solar magnetic flux to be closed in the corona, it is an outstanding question why type III bursts are more frequently observed than U-bursts or J-bursts. We use LOFAR imaging spectroscopy between 30-80 MHz of low-frequency U-bursts and J-bursts, for the first time, to understand why electron beams travelling along coronal loops produce radio emission less often. The different radio source positions were used to model the spatial structure of the guiding magnetic flux tube and then deduce the energy range of the exciting electron beams without the assumption of a standard density model. The radio sources infer a magnetic loop 1 solar radius in altitude, with the highest frequency sources starting around 0.6 solar radii. Electron velocities were found between 0.13 c and 0.24 c, with the front of the electron beam travelling faster than the back of the electron beam. The velocities correspond to energy ranges within the beam from 0.7-11 keV to 0.7-43 keV. The density along the loop is higher than typical coronal density models and the density gradient is smaller. We found that a more restrictive range of accelerated beam and background plasma parameters can result in U-bursts or J-bursts, causing type III bursts to be more frequently observed. The large instability distances required before Langmuir waves are produced by some electron beams, and the small magnitude of the background density gradients make closed loops less facilitating for radio emission than loops that extend into interplanetary space.
description: 9 pages, 7 figures
On Axiomatizability of the Multiplicative Theory of Numbers
Creators: name: Salehi, Saeed
Publisher: name: arXiv
Year: 2017
Subjects: subject: Logic (math.LO)
subject: Logic in Computer Science (cs.LO)
subject: FOS: Mathematics
subject: FOS: Computer and information sciences
subject: 03B25, 03C10, 03D35, 03C65

description: The multiplicative theory of a set of numbers (which could be natural, integer, rational, real or complex numbers) is the first-order theory of the structure of that set with (solely) the multiplication operation (that set is taken to be multiplicative, i.e., closed under multiplication). In this paper we study the multiplicative theories of the complex, real and (positive) rational numbers. These theories (and also the multiplicative theories of natural and integer numbers) are known to be decidable (i.e., there exists an algorithm that decides whether a given sentence is derivable form the theory); here we present explicit axiomatizations for them and show that they are not finitely axiomatizable. For each of these sets (of complex, real and [positive] rational numbers) a language, including the multiplication operation, is introduced in a way that it allows quantifier elimination (for the theory of that set).
description: 18 pages
Batis maritima Linnaeus 1759
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Brassicales
Bataceae
Batis
Batis maritima

description: Batis maritima Linnaeus, Systema Naturae, ed. 10, 2: 1289. 1759.
["Habitat in Jamaica maritimis salsis."] Sp. Pl., ed. 2, 2: 1451 (1763). RCN: 7401.
 Neotype (Monro in Cafferty & Monro in Novon 9: 490. 1999): Jamaica. Middlesex County, Clarendon Parish, nearTarentum farm, 10ft, 3 Jan 1960, C.D. Adams 6063 (UCWI).
 Generitype of Batis P. Browne (1756).
 Current name: Batis maritima L. (Bataceae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part B), pp. 343-369 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 346, DOI: 10.5281/zenodo.291971
Faster ticking rate of the epigenetic clock is associated with faster pubertal development in girls
Creators: name: Binder, Alexandra M.
name: Corvalan, Camila
name: Mericq, Verónica
name: Pereira, Ana
name: Santos, José Luis
name: Horvath, Steve
name: Shepherd, John
name: Michels, Karin B.
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Epigenetic age is an indicator of biological aging, capturing the impact of environmental and behavioral influences across time on cellular function. Deviance between epigenetic age and chronological age (AgeAccel) is a predictor of health. Pubertal timing has similarly been associated with cancer risk and mortality rate among females. We examined the association between AgeAccel and pubertal timing and adolescent breast composition in the longitudinal Growth and Obesity Cohort Study. AgeAccel was estimated in whole blood using the Horvath method at breast Tanner 2 (B2) and 4 (B4). Total breast volume, absolute fibro-glandular volume (FGV), and %FGV were evaluated at B4 using dual X-ray absorptiometry. The impact of AgeAccel (mean: 0; SD: 3.78) across puberty on the time to breast development (thelarche), menarche, and pubertal tempo (thelarche to menarche) was estimated using accelerated failure time models; generalized estimating equations were used to evaluate associations with breast density. A five-year increase in average adolescent AgeAccel was associated with a significant decrease in time to menarche [hazard ratio (HR): 1.37; 95% confidence interval (CI): 1.04, 1.80] adjusting for birth weight, maternal pre-pregnancy body mass index, maternal height, maternal education, B2 height, fat percentage, and cell composition. AgeAccel displayed a stronger inverse association with pubertal tempo (HR: 1.48; 95% CI: 1.10, 1.99). A five-year increase in AgeAccel was associated with 5% greater %FGV, adjusting for B4 percent body fat, and maternal traits (95% CI: 1.01, 1.10). Our study provides unique insight into the influence of AgeAccel on pubertal development in girls, which may have implications for adult health.
Production of a new mucilage compound in Lepidium sativum callus by optimizing in vitro growth conditions
Creators: name: Pooran Golkar
name: Hadian, Fatemeh
name: Mehrana Koohi Dehkordi
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Biochemistry
subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Plant Biology

description: The mucilage in Lepidium sativum L. is considered a biologically active compound with diverse medicinal properties. Different explants (hypocotyls and leaf) were transferred to Murashige and Skoog (MS) medium supplemented with twelve different plant growth regulator combinations under two different incubations (light and dark). The best mucilage production from callus (36.76% g g−1 dry weight) was obtained in the MS medium supplemented with 1 mg L−1 of 2, 4-D and 2 mg L−1 of BAP under the light condition. The mucilage produced by callus culture was nearly three times more than the mucilage yield of the seeds. The glucose, arabinose + mannose and galactose were 43.4 (mg g−1 DW), 195.3 (mg g−1 DW) and 86.2 (mg g−1 DW) in the mucilage originated from seed, callus leaf and callus hypocotyl, respectively. The present study proposes an efficient method for producing large scales of mucilage with a favorable sugar aimed at food or pharmaceutical industries.
Silicon PIN diodes as Neganov-Trofimov-Luke cryogenic light detectors
Creators: name: Defay, X.
name: Mondragon, E.
name: Lanfranchi, J. -C.
name: Langenkamper, A.
name: Munster, A.
name: Potzel, W.
name: Schonert, S.
name: Wawoczny, S.
name: Willers, M.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Instrumentation and Detectors (physics.ins-det)
subject: FOS: Physical sciences

description: Cryogenic rare event searches based on heat and light composite calorimeters have a common need for large area photon detectors with high quantum efficiency, good radiopurity and high sensitivity. By employing the Neganov-Trofimov-Luke effect (NTLE), the phonon signal of particle interactions in a semiconductor absorber operated at cryogenic temperatures can be amplified by drifting the photogenerated electrons and holes in an electric field. We present here the last results of a Neganov-Trofimov-Luke effect light detector with an electric field configuration optimized to improve the charge collection within the absorber.
description: Submitted
Exploring the challenges experienced by the Intensive Care Unit nurses during the organ donation process – a scoping review protocol
Creators: name: Edwards, Deborah
name: Selvaraj, Nelson
name: Dr. Jessica Baillie
name: Jones, Jonathan
Publisher: name: OSF Registries
Year: 2023
Subjects: subject: Medicine and Health Sciences
subject: Barriers
subject: Challenges
subject: Critical care nurse
subject: ICU nurse
subject: Intensive Care Unit
subject: Organ donation
subject: Scoping review
subject: Tissue donation

description: Abstract Objective: The aims of this scoping review is to provide an overview of the challenges experienced by Intensive Care Unit (ICU) nurses during the organ donation process and identify support models or strategies that may support ICU nurses when caring for potential organ donors and their families during the organ donation process. Introduction: Caring for a potential organ donor and their relatives can be a challenging prospect for many ICU nurses. Internationally, there has been a range of reported challenges nurses experience during the organ donation process, and a better understanding of these may improve the quality of care and the overall experience of donors’ families. Inclusion criteria: Studies that report on challenges experienced by the ICU nurses in adult ICU settings while caring for patients during the organ donation process will be included. Studies that report on support models or strategies to address these challenges will also be included. Methods: This scoping review will be conducted in accordance with the methods outlined by JBI and reported using PRISMA-ScR guidance. The following databases will be searched for eligible studies: Cochrane library, MEDLINE (via Ovid), Embase, APA PsycINFO, Scopus, OVID Emcare, Web of Science and CINAHL (via EBSCO). No time or language restrictions will be applied. Studies will be screened for inclusion by two independent reviewers and data extraction will be carried out using the data extraction form designed specifically for this review. Results will be analysed and presented according to the concepts of interest, using tables, figures and supporting narrative summary. Keywords: Organ donation; Intensive Care Unit; ICU nurse; barriers; challenges
Tree-ansatz percolation of hard spheres
Creators: name: Grimaldi, Claudio
Publisher: name: arXiv
Year: 2017
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: Suspensions of hard core spherical particles of diameter $D$ with inter-core connectivity range $δ$ can be described in terms of random geometric graphs, where nodes represent the sphere centers and edges are assigned to any two particles separated by a distance smaller than $δ$. By exploiting the property that closed loops of connected spheres becomes increasingly rare as the connectivity range diminishes, we study continuum percolation of hard spheres by treating the network of connected particles as having a treelike structure for small $δ/D$. We derive an analytic expression of the percolation threshold which becomes increasingly accurate as $δ/D$ diminishes, and whose validity can be extended to a broader range of connectivity distances by a simple rescaling.
description: 6 pages, 4 figures
Insights into structural features of HDAC1 and its selectivity inhibition elucidated by Molecular dynamic simulation and Molecular Docking
Creators: name: Yudibeth Sixto-López
name: Bello, Martiniano
name: Correa-Basurto, José
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Biophysics
subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Histone deacetylases (HDACs) are a family of proteins whose main function is the removal of acetyl groups from lysine residues located on histone and non-histone substrates, which regulates gene transcription and other activities in cells. HDAC1 dysfunction has been implicated in cancer development and progression; thus, its inhibition has emerged as a new therapeutic strategy. Two additional metal binding sites (Site 1 and Site 2) in HDACs have been described that are primarily occupied by potassium ions, suggesting a possible structural role that affects HDAC activity. In this work, we explored the structural role of potassium ions in Site 1 and Site 2 and how they affect the interactions of compounds with high affinities for HDAC1 (AC1OCG0B, Chlamydocin, Dacinostat and Quisinostat) and SAHA (a pan-inhibitor) using molecular docking and molecular dynamics (MD) simulations in concert with a Molecular-Mechanics-Generalized-Born-Surface-Area (MMGBSA) approach. Four models were generated: one with a potassium ion (K+) in both sites (HDAC1k), a second with K+ only at site 1 (HDAC1ks1), a third with K+ only at site 2 (HDAC1ks2) and a fourth with no K+ (HDAC1wk). We found that the presence or absence of K+ not only impacted the structural flexibility of HDAC1, but also its molecular recognition, consistent with experimental findings. These results could therefore be useful for further structure-based drug design studies addressing new HDAC1 inhibitors.
title: ADCO, Grènetier de Cîteaux : comptes (1499-1503) (11 H 1173), f. 00331
Creators: name: de la Côte-d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CBMA/CG21/F.PETOT/2019
name: Petot, Frédéric
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: comptes
subject: Corpus Burgundiae Medii Aevi
subject: LaMOP
subject: Chartes de la Bourgogne du Moyen Âge
subject: Laboratoire de Médiévistique Occidentale de Paris

description: Grènetier de Cîteaux : comptes (1499-1503), Archives départementales de la Côte-d'Or, (11 H 1173). Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Grènetier de Cîteaux : comptes (1499-1503), Archives départementales de la Côte-d'Or, (11 H 1173), f. 00331, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https://manuscrits.cbma-project.eu/
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
Bauhinia aculeata Linnaeus 1753
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Fabales
Fabaceae
Bauhinia
Bauhinia aculeata

description: Bauhinia aculeata Linnaeus, Species Plantarum 1: 374. 1753.
"Habitat in America calidiore." RCN: 2948.
 Lectotype (Stearn, Introd. Linnaeus’ Sp. Pl.  (Ray Soc. ed.): 47. 1957): [icon] " Bauhinia caule aculeato" in Linnaeus, Hort. Cliff.: 156, t. 14. 1738. - Voucher: Herb. Clifford: 156, Bauhinia 1 (BM).
 Current name: Bauhinia aculeata L. (Fabaceae: Caesalpinioideae).
 Note: This was treated as the generitype of Bauhinia by Britton & Wilson (Bot. Porto Rico Virgin Is. 5: 362. 1924) (see McNeill & al. in Taxon 36: 362. 1987). However, under Art. 10.5, Ex. 7 (a voted example) of the Vienna Code, this is a type choice made under the American Code and is to be replaced under Art. 10.5b by Hitchcock’s choice (Prop. Brit. Bot.: 152. 1929) of B. divaricata L.
 Wunderlin (in Ann. Missouri Bot. Gard. 63: 47. 1976) indicated Clifford material as type but this choice is pre-dated by that of Stearn.
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part B), pp. 343-369 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 346, DOI: 10.5281/zenodo.291971
Motional Ground State Cooling Outside the Lamb-Dicke Regime
Creators: name: Yu, Yichao
name: Hutzler, Nicholas R.
name: Zhang, Jessie T.
name: Liu, Lee R.
name: Hood, Jonathan D.
name: Rosenband, Till
name: Ni, Kang-Kuen
Publisher: name: arXiv
Year: 2017
Subjects: subject: Atomic Physics (physics.atom-ph)
subject: Quantum Gases (cond-mat.quant-gas)
subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: We report Raman sideband cooling of a single sodium atom to its three-dimensional motional ground state in an optical tweezer. Despite a large Lamb-Dicke parameter, high initial temperature, and large differential light shifts between the excited state and the ground state, we achieve a ground state population of $93.5(7)$% after $53$ ms of cooling. Our technique includes addressing high-order sidebands, where several motional quanta are removed by a single laser pulse, and fast modulation of the optical tweezer intensity. We demonstrate that Raman sideband cooling to the 3D motional ground state is possible, even without tight confinement and low initial temperature.
description: 5 pages, 4 figures
Ultrahigh Error Threshold for Surface Codes with Biased Noise
Creators: name: Tuckett, David K.
name: Bartlett, Stephen D.
name: Flammia, Steven T.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We show that a simple modification of the surface code can exhibit an enormous gain in the error correction threshold for a noise model in which Pauli Z errors occur more frequently than X or Y errors. Such biased noise, where dephasing dominates, is ubiquitous in many quantum architectures. In the limit of pure dephasing noise we find a threshold of 43.7(1)% using a tensor network decoder proposed by Bravyi, Suchara and Vargo. The threshold remains surprisingly large in the regime of realistic noise bias ratios, for example 28.2(2)% at a bias of 10. The performance is in fact at or near the hashing bound for all values of the bias. The modified surface code still uses only weight-4 stabilizers on a square lattice, but merely requires measuring products of Y instead of Z around the faces, as this doubles the number of useful syndrome bits associated with the dominant Z errors. Our results demonstrate that large efficiency gains can be found by appropriately tailoring codes and decoders to realistic noise models, even under the locality constraints of topological codes.
description: 6 pages, 5 figures, comments welcome; v2 includes minor improvements to the numerical results, additional references, and an extended discussion; v3 published version (incorporating supplementary material into main body of paper)
Insights into structural features of HDAC1 and its selectivity inhibition elucidated by Molecular dynamic simulation and Molecular Docking
Creators: name: Yudibeth Sixto-López
name: Bello, Martiniano
name: Correa-Basurto, José
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Biophysics
subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Histone deacetylases (HDACs) are a family of proteins whose main function is the removal of acetyl groups from lysine residues located on histone and non-histone substrates, which regulates gene transcription and other activities in cells. HDAC1 dysfunction has been implicated in cancer development and progression; thus, its inhibition has emerged as a new therapeutic strategy. Two additional metal binding sites (Site 1 and Site 2) in HDACs have been described that are primarily occupied by potassium ions, suggesting a possible structural role that affects HDAC activity. In this work, we explored the structural role of potassium ions in Site 1 and Site 2 and how they affect the interactions of compounds with high affinities for HDAC1 (AC1OCG0B, Chlamydocin, Dacinostat and Quisinostat) and SAHA (a pan-inhibitor) using molecular docking and molecular dynamics (MD) simulations in concert with a Molecular-Mechanics-Generalized-Born-Surface-Area (MMGBSA) approach. Four models were generated: one with a potassium ion (K+) in both sites (HDAC1k), a second with K+ only at site 1 (HDAC1ks1), a third with K+ only at site 2 (HDAC1ks2) and a fourth with no K+ (HDAC1wk). We found that the presence or absence of K+ not only impacted the structural flexibility of HDAC1, but also its molecular recognition, consistent with experimental findings. These results could therefore be useful for further structure-based-drug design studies addressing new HDAC1 inhibitors.
Synthetic Random Flux Model in a periodically-driven optical lattice
Creators: name: Major, Jan
name: Płodzień, Marcin
name: Dutta, Omjyoti
name: Zakrzewski, Jakub
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We propose a realization of a synthetic Random Flux Model in a two-dimensional optical lattice. Starting from Bose-Hubbard Hamiltonian for two atom species we show how to use fast-periodic modulation of the system parameters to construct random gauge field. We investigate the transport properties of such a system and describe the impact of time-reversal symmetry breaking and correlations in disorder on Anderson localization length.
description: 6 pages, 4 figures
Bauhinia acuminata Linnaeus 1753
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Fabales
Fabaceae
Bauhinia
Bauhinia acuminata

description: Bauhinia acuminata Linnaeus, Species Plantarum 1: 375. 1753.
"Habitat in Indiis." RCN: 2954.
 Lectotype (de Wit in Reinwardtia 3: 397. 1956): Herb. Hermann 1: 42, No. 148 (BM-000621378).
 Current name: Bauhinia acuminata L. (Fabaceae: Caesalpinioideae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part B), pp. 343-369 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 346, DOI: 10.5281/zenodo.291971
Temporal and spatial scales of water temperature variability as an indicator for mixing in a polymictic lake
Creators: name: Schmidt, Silke R.
name: Gerten, Dieter
name: Hintze, Thomas
name: Lischeid, Gunnar
name: Livingstone, David M.
name: Adrian, Rita
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Biochemistry
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified

description: We applied coarse spectral analysis to more than 2 decades of daily near-surface water temperature (WT) measurements from Müggelsee, a shallow polymictic lake in Germany, to systematically characterize patterns in WT variability from daily to yearly temporal scales. Comparison of WT with local air temperature indicates that the WT variability patterns are likely attributable to both meteorological forcing and internal lake dynamics. We identified seasonal patterns of WT variability and showed that WT variability increases with increasing Schmidt stability, decreasing Lake number and decreasing ice cover duration, and is higher near the shore than in open water. We introduced the slope of WT spectra as an indicator for the degree of lake mixing to help explain the identified temporal and spatial scales of WT variability. The explanatory power of this indicator in other lakes with different mixing regimes remains to be established.
Additional file 2 of A thematic analysis of the subjective experiences of mothers with borderline personality disorder who completed Mother-Infant Dialectical Behaviour Therapy: a 3-year follow-up
Creators: name: Giles, Alexandra
name: Sved Williams, Anne
name: Webb, Stephanie
name: Drioli-Phillips, Phoebe
name: Winter, Amelia
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Science Policy
subject: Mental Health

description: Supplementary Material 2
MgO-CeO2 nanocomposite: efficient catalyst for the preparation of 2-aminothiophenes and thieno[2,3-d]pyrimidin-4(3H)-one derivatives
Creators: name: Saina Shafighi
name: Shafiee, Mohammad Reza Mohammad
name: Ghashang, Majid
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Cell Biology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Inorganic Chemistry

description: MgO-CeO2 nanocomposite was prepared by a co-precipitation method and characterized by X-ray diffraction (XRD), FE-SEM, and particle size distribution analysis. The XRD pattern shows the cubic phase of cerium oxide as the dominate phase. FE-SEM images show the homogeneity distribution of magnesium and cerium oxides in the sample. The mean particle size of nanocomposite determined by the dynamic light scattering technique is 66 nm. The catalytic activity of MgO-CeO2 nanocomposite was examined on the synthesis of 2-aminothiophenes and thieno[2,3-d]pyrimidin-4(3H)-one derivatives. In all cases, products were obtained in good to excellent yields.