cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
TRIPLE Deliverable: D6.2 Report on Procedure to Follow to Be Part of the EOSC Catalogue
Creators: name: Di Donato, Francesca
name: Dumouchel, Suzanne
name: Lombardo, Tiziana
name: Katsaloulis, Iraklis
name: Ocansey, Joshua Tetteh
name: Thiel, Carsten
name: Capelli, Laurent
name: Chen, Yen
name: Eskevich, Maria
name: Moranville, Yoann
name: De Santis, Luca
name: Tóth-Czifra, Erzsébet
Publisher: name: Zenodo
Year: 2021
Subjects: social sciences and humanities
SSH
research infrastructure
OPERAS
TRIPLE

description: The 6.2 Deliverable presents the procedure to onboard the future GoTriple platform into the EOSC catalogue. This deliverable is supposed to guide the TRIPLE consortium in the purpose of adding a SSH discovery platform to the EOSC catalogue but it can also guide other service providers for their own purposes, especially services that are made with different components. Part 1 of this deliverable provides an overview of the GoTriple platform and the five innovative services that are integrated into it, e.g. ScaR, MEOH App, Visualisation components, Pundit, and Head Start. As those innovative services are independent tools, the perspectives, challenges and potential solutions of their onboarding into the EOSC catalogue are discussed in detail on a case-by-case basis. Part 2 contains the core information of this deliverable. First, an overview of the three main steps in the onboarding process (2.1.) provides the overall context of the task. Second, the timeline of all needed steps (already taken and planned closer to the end of the project) to define the final federation that will serve as GoTriple provider is outlined (2.2). Essentially, all project partners that are committed to continue their support of the developed service after the project will be identified as GoTriple providers in the EOSC portal, while the GoTriple discovery service will be part of the OPERAS Research Infrastructure’s catalogue. Third, the details of the resource profile that are mandatory and optional, are listed according to the set of fields in the EOSC portal. Part 3 summarises the two main steps in the roadmap for integration which are planned to take place in September 2021 and March 2023. In conclusion, the authors highlight the fact that the EOSC development is an ongoing process, and therefore, the current report reflects the procedures and planning steps that are valid at this point of time and fit the current requirements.
description: The deliverable awaits official approval by the Project Officer. --- The TRIPLE project (https://project.gotriple.eu/), which is financed under the Horizon 2020 framework (https://cordis.europa.eu/project/id/863420), under Grant Agreement No. 863420, with approx. 5.6 million Euros for a duration of 42 months (2019-2023). --- At the heart of the project is the development of the GoTriple platform (https://www.gotriple.eu/), an innovative multilingual and multicultural discovery solution.
A New TeV Binary: The Discovery of an Orbital Period in HESS J0632+057
Creators: name: Bongiorno, Stephen
name: Falcone, Abraham
name: Stroh, Michael
name: Holder, Jamie
name: Skilton, Joanna
name: Hinton, Jim
name: Gehrels, Neil
name: Grube, Jeff
Publisher: name: arXiv
Year: 2011
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: HESS J0632+057 is a variable, point-like source of Very High Energy ($>100$ GeV) gamma-rays located in the Galactic plane. It is positionally coincident with a Be star, it is a variable radio and X-ray source, has a hard X-ray spectrum, and has low radio flux. These properties suggest that the object may be a member of the rare class of TeV/X-ray binary systems. The definitive confirmation of this would be the detection of a periodic orbital modulation of the flux at any wavelength. We have obtained {\it Swift} X-ray telescope observations of the source from MJD 54857 to 55647 (Jan. 2009 - Mar. 2011) to test the hypothesis that HESS J0632+057 is an X-ray/TeV binary. We show that these data exhibit flux modulation with a period of $321 \pm 5$ days and we evaluate the significance of this period by calculating the null hypothesis probability, allowing for stochastic flaring. This periodicity establishes the binary nature of HESS J0632+057.
description: 12 pages, 3 figures, accepted to ApJ Letters
Additional file 1 of Cancer patients as parents: implementation of a cross sector service for families with adolescent and young adult children
Creators: name: Skrabal Ross, X.
name: McDonald, F.E.J.
name: Konings, S.
name: Schiena, E.
name: Phipps-Nelson, J.
name: Hodgson, F.
name: Patterson, P.
Publisher: name: figshare
Year: 2023
Subjects: subject: Biophysics
subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy

description: Supplementary Material 1
The Origin of Separable States and Separability Criteria from Entanglement-breaking Channels
Creators: name: Wang, Bang-Hai
name: Li, Qin
name: Long, Dongyang
Publisher: name: arXiv
Year: 2010
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: In this paper, we show that an arbitrary separable state can be the output of a certain entanglement-breaking channel corresponding exactly to the input of a maximally entangled state. A necessary and sufficient separability criterion and some sufficient separability criteria from entanglement-breaking channels are given.
description: EBCs with trace-preserving and EBCs without trace-preserving are separately discussed
Additional file 1 of A longitudinal analysis of the progression from normal blood pressure to stage 2 hypertension: A 12-year Korean cohort
Creators: name: Yu, Eun Sun
name: Hong, Kwan
name: Chun, Byung Chul
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Statistics
subject: Science Policy

description: Additional file 1: Supplementary Figure 1. The progression from normal BP to stage 2 hypertension (Ages: 40-49/50-59/60-79). Supplementary Figure 2. The progression from normal BP to stage 2 hypertension (Sex: male). Supplementary Figure 3. The progression from normal BP to stage 2 hypertension (Sex: female). Supplementary Figure 4. The progression from normal BP to stage 2 hypertension (BMI<25 kg/m2). Supplementary Figure 5. The progression from normal BP to stage 2 hypertension (BMI≥25 kg/m2)
The effects of environmental stressors on intertidal foundation species and their associated communities
Creators: name: Hesketh, Amelia
Publisher: name: University of British Columbia
Year: 2022

description: As environmental stress increases due to climate change, species and the ecological communities that they comprise will be impacted, in many cases according to species’ abiotic tolerances. Ecological theory predicts that foundation species may become increasingly important for mitigating this environmental stress for the species that associate with them. However, it is often unclear how foundation species will be affected by climate change and if, and how, their ability to facilitate associated species may be altered. Here, I addressed questions stemming from this knowledge gap using field studies of intertidal, sessile invertebrate foundation species using natural and manipulated environmental stressors, primarily within coastal British Columbia, Canada. First, how are foundation species affected by realistic combinations of environmental stressors in situ? I found that an introduced oyster grew more quickly with increasing temperature and — though its survival was reduced by acutely high temperatures — it was not vulnerable to other environmental stressors, possibly because there was no temporal overlap between these and high temperatures. Second, how do foundation species and their associated community respond to extreme events? I found that a heatwave caused substantial mortality of a mid-intertidal barnacle where solar irradiance, and thus substratum temperature, was high and resulted in composition and diversity shifts in barnacle- associated communities. Third, do the impacts of environmental stress on foundation species persist through time? Within a high intertidal barnacle bed, I found that elevated temperatures in one summer had legacy effects on communities during the subsequent summer, likely mediated by differences in barnacle density. Finally, can introduced foundation species have positive effects in their introduced range on species with which they did not co-evolve? I found that high intertidal acorn barnacles, likely due to the generalist nature of their facilitation, can have positive effects in both their native and introduced ranges. Foundation species, while they are able to benefit associated species by buffering environmental stress, are often themselves vulnerable to that stress. By exploring these nuances, my work helps elucidate the importance of considering foundation species when predicting the ecological impacts of global change.
The radio continuum structure of Centaurus A at 1.4 GHz
Creators: name: Feain, Ilana
name: Cornwell, Tim
name: Ekers, Ron
name: Calabretta, Mark
name: Norris, Ray
name: Johnston-Hollitt, Melanie
name: Ott, Juergen
name: Lindley, Emma
name: Gaensler, Bryan
name: Murphy, Tara
name: Middelberg, Enno
name: Jiraskova, Sarka
name: O'Sullivan, Shane
name: McClure-Griffiths, Naomi
name: Bland-Hawthorn, Joss
Publisher: name: arXiv
Year: 2011
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: A 45 deg2 radio continuum imaging campaign of the nearest radio galaxy, Centaurus A, is reported. Using the Australia Telescope Compact Array and the Parkes 64m radio telescope at 1.4 GHz, the spatial resolution of the resultant image is ~600 pc, resolving the ~500 kpc giant radio lobes with approximately five times better physical resolution compared to any previous image, and making this the most detailed radio continuum image of any radio galaxy to date. In this paper, we present these new data and discuss briefly some of the most interesting morphological features that we have discovered in the images... abstract truncated.
description: ApJ in press. This version (now accepted in ApJ) now replaces the earlier submission. Changes made between two versions include updated explanation of how we made Figure 2, the inclusion of Figures 7a and 7b showing cuts across the lobes to highlight sharp and not-sharp lobe boundaries
Additional file 1 of Engagement is a necessary condition to test audit and feedback design features: results of a pragmatic, factorial, cluster-randomized trial with an embedded process evaluation
Creators: name: McCleary, Nicola
name: Desveaux, Laura
name: Presseau, Justin
name: Reis, Catherine
name: Witteman, Holly O.
name: Taljaard, Monica
name: Linklater, Stefanie
name: Thavorn, Kednapa
name: Dobell, Gail
name: Mulhall, Cara L.
name: Lam, Jonathan M. C.
name: Grimshaw, Jeremy M.
name: Ivers, Noah M.
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Neuroscience
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1. Study Checklist.
Quantum superpositions of flow states on a ring
Creators: name: Kanamoto, Rina
name: Wright, Ewan M.
Publisher: name: arXiv
Year: 2010
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: FOS: Physical sciences

description: We propose a scheme to generate quantum superpositions of macroscopically distinct flow states of ultracold atoms on a ring using Raman coupling employing a quantized laser field that is a cat-like superposition of optical vortices with opposite winding numbers. For atoms initially in their ground state and entangled optical vortices of coherent states, this scheme can produce a superposition of rotating and non-rotating states. We find fidelities of the quantum superpositions around 0.9 even before optimization.
Further improvements on a global nuclear mass model
Creators: name: Liu, Min
name: Wang, Ning
name: Deng, Yangge
name: Wu, Xizhen
Publisher: name: arXiv
Year: 2011
Subjects: subject: Nuclear Theory (nucl-th)
subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: The semi-empirical macroscopic-microscopic mass formula is further improved by considering some residual corrections. The rms deviation from 2149 known nuclear masses is significantly reduced to 336 keV, even lower than that achieved with the best of the Duflo-Zuker models. The alpha-decay energies of super-heavy nuclei, the Garvey-Kelson relations and the isobaric multiplet mass equation (IMME) can be reproduced remarkably well with the model, and the predictive power of the mass model is good. With a systematic study of 17 global nuclear mass models, we find that the quadratic form of the IMME is closely related to the accuracy of nuclear mass calculations when the Garvey-Kelson relations are reproduced reasonably well. Fulfilling both the IMME and the Garvey-Kelson relations seems to be two necessary conditions to improve the quality of the model prediction. Furthermore, the alpha-decay energies of super-heavy nuclei should be used as an additional constraint on the global nuclear mass models.
description: 10 figures, 2 tables; version to appear in Phys. Rev. C
The causes and consequences of candidate immigration rhetoric in US congressional elections, 2012-2018
Creators: name: Frangipane, Bret
Publisher: name: University of British Columbia
Year: 2022

description: Since the 1990s, the issue of immigration in US politics has undergone a notable political transition. Though cross-partisan through much of the twentieth century, immigration is now one of the most salient and divisive issues in US politics. Due to immigration’s salience, issue ownership theory offers insights into how candidates might interact with immigration, particularly that candidates would focus on issues that their party owns rather than compete on common issues to gain votes. Using immigration campaign ad data from US congressional general election campaigns from 2012 to 2018, this paper challenges issue ownership theory and instead supports an alternative ‘policy preference theory’ that centers voters’ policy preferences. Ad data shows a substantial increase in campaign immigration rhetoric among both parties, though Republicans are more likely to use immigration rhetoric than Democrats. Candidates in general are more likely to use immigration rhetoric when the district Latino population favors their party. Breaking from leadership’s rhetorical embrace of expansionary policies, Democrat as well as Republican candidates more often used anti-immigration than either ambiguous- or pro- immigration rhetoric, though Republican candidates did so more heavily. Rather than hurt candidates, preliminary evidence suggests that trespassing the party’s immigration stance can increase election margins in unfavorable districts. Regression analyses also reveal that Latino population size influences candidate immigration stance in predictable ways. This study provides insights into the political influence of Latino populations, the effects of campaign advertising, and the electoral incentives that influence candidate immigration rhetoric.
Additional file 2 of Engagement is a necessary condition to test audit and feedback design features: results of a pragmatic, factorial, cluster-randomized trial with an embedded process evaluation
Creators: name: McCleary, Nicola
name: Desveaux, Laura
name: Presseau, Justin
name: Reis, Catherine
name: Witteman, Holly O.
name: Taljaard, Monica
name: Linklater, Stefanie
name: Thavorn, Kednapa
name: Dobell, Gail
name: Mulhall, Cara L.
name: Lam, Jonathan M. C.
name: Grimshaw, Jeremy M.
name: Ivers, Noah M.
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Neuroscience
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 2. Excerpts from the A&F reports.
Chapter 7: Other Language Groups in the Gulf District and Adjacent Areas
Creators: name: Franklin, Karl (Ed.)
Publisher: name: Pacific Linguistics
Year: 1973

description: CHAPTER 7: OTHER LANGUAGE GROUPS IN THE GULF DISTRICT AND ADJACENT AREAS. 261 7.1. Introduction 263 7.2. Kairi 263 7.21. Lexicostatistical Figures 264 7.3. Turama-Omati 265 7.31. Omati 265 7.32. Ikobi 266 7.33. Other Area Names 266 7.34. Other Observations 267 7.4. The Inland Gulf Stock 269 7.41. The Ipiko 269 7.42. Minanibai 269 7.43. Karami 270 7.44. Tao-Suamato 270 7.45. Lexicostatistical Figures 270 7.46. Comments on Phonology and Grammar 272 7.5. Unrelated Languages 273 7.51. Kibiri 273 7.6. Conclusion 274APPENDIX 276BIBLIOGRAPHY 277
Additional file 3 of Engagement is a necessary condition to test audit and feedback design features: results of a pragmatic, factorial, cluster-randomized trial with an embedded process evaluation
Creators: name: McCleary, Nicola
name: Desveaux, Laura
name: Presseau, Justin
name: Reis, Catherine
name: Witteman, Holly O.
name: Taljaard, Monica
name: Linklater, Stefanie
name: Thavorn, Kednapa
name: Dobell, Gail
name: Mulhall, Cara L.
name: Lam, Jonathan M. C.
name: Grimshaw, Jeremy M.
name: Ivers, Noah M.
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Neuroscience
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 3. CONSORT flow diagram.
The Effects of Teacher Implementation of Differential Reinforcement of Alternative Behavior in Individuals with Autism Spectrum Disorder
Creators: name: Hitch, Elena J.
Publisher: name: University of Kentucky Libraries
Year: 2019

description: Abstract:
The purpose of this study was to evaluate the effects of a classroom teacher implementing trail-based functional analyses (FAs), experimentally evaluate the effects of a classroom teacher implementing differential reinforcement of alternative (DRA) procedures with participants diagnosed with autism spectrum disorder in the context of a natural setting, and assess the feasibility of the DRA for the classroom teacher. A multiple baseline with an embedded ABAB design was used for one participant and an ABAB design was used for the second participant to measure the percentage of the participants’ engagement in the alternative behavior and the target behavior. Results showed that the classroom teacher could implement the trail-based FAs with fidelity, DRA procedures were effective for both participants, and the teacher was neutral in regard to the feasibility of the procedures.
Copyright: © Elena J. Hitch 2019
Memory cost of quantum contextuality
Creators: name: Kleinmann, Matthias
name: Gühne, Otfried
name: Portillo, José R.
name: Larsson, Jan-Åke
name: Cabello, Adán
Publisher: name: arXiv
Year: 2010
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The simulation of quantum effects requires certain classical resources, and quantifying them is an important step in order to characterize the difference between quantum and classical physics. For a simulation of the phenomenon of state-independent quantum contextuality, we show that the minimal amount of memory used by the simulation is the critical resource. We derive optimal simulation strategies for important cases and prove that reproducing the results of sequential measurements on a two-qubit system requires more memory than the information carrying capacity of the system.
description: 18 pages, no figures, v2: revised for clarity
Additional file 4 of Engagement is a necessary condition to test audit and feedback design features: results of a pragmatic, factorial, cluster-randomized trial with an embedded process evaluation
Creators: name: McCleary, Nicola
name: Desveaux, Laura
name: Presseau, Justin
name: Reis, Catherine
name: Witteman, Holly O.
name: Taljaard, Monica
name: Linklater, Stefanie
name: Thavorn, Kednapa
name: Dobell, Gail
name: Mulhall, Cara L.
name: Lam, Jonathan M. C.
name: Grimshaw, Jeremy M.
name: Ivers, Noah M.
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Neuroscience
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 4. Results of factorial analyses.
Inclusive dijet cross sections in neutral current deep inelastic scattering at HERA
Creators: name: ZEUS Collaboration
Publisher: name: arXiv
Year: 2010
Subjects: subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: Single- and double-differential inclusive dijet cross sections in neutral current deep inelastic ep scattering have been measured with the ZEUS detector using an integrated luminosity of 374 pb^-1. The measurement was performed at large values of the photon virtuality, Q^2, between 125 and 20000 GeV^2. The jets were reconstructed with the k_T cluster algorithm in the Breit reference frame and selected by requiring their transverse energies in the Breit frame, E_T,B^jet, to be larger than 8 GeV. In addition, the invariant mass of the dijet system, M_jj, was required to be greater than 20 GeV. The cross sections are described by the predictions of next-to-leading-order QCD.
description: 33 pages, 14 figures, 8 tables
Additional file 1 of Hyaluronic acid modified covalent organic polymers for efficient targeted and oxygen-evolved phototherapy
Creators: name: Fangpeng Shu
name: Taowei Yang
name: Xuefeng Zhang
name: Wenbin Chen
name: Kaihui Wu
name: Junqi Luo
name: Xumin Zhou
name: Guochang Liu
name: Jianming Lu
name: Mao, Xiangming
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 1. The calculation method of photothermal conversion efficiency of ICG@FeD and ICG@FeDH.
The characteristic initial value problem for plane symmetric spacetimes with weak regularity
Creators: name: LeFloch, Philippe G.
name: Stewart, John M.
Publisher: name: arXiv
Year: 2010
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: Analysis of PDEs (math.AP)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: We investigate the existence and the global causal structure of plane symmetric spacetimes with weak regularity when the matter consists of an irrotational perfect fluid with pressure equal to its mass-energy density. Our theory encompasses the class of weakly regular spacetimes whose metric coefficients have square-integrable first-order derivatives and whose curvature must be understood in the sense of distributions. We formulate the characteristic initial value problem with data posed on two null hypersurfaces intersecting along a two-plane. Relying on Newman-Penrose's formalism and expressing our weak regularity conditions in terms of the Newman-Penrose scalars, we arrive at a fully geometrical formulation in which, along each initial hypersurface, two scalar fields describing the incoming radiation must be prescribed. To analyze the future boundary of such a spacetime and identify its global causal structure, we introduce a gauge that reduces the Einstein equations to a coupled system of wave equations and ordinary differential equations for well-chosen unknowns. We prove that, within the weak regularity class under consideration and for generic initial data, a true spacetime singularity forms in finite proper time. Our formulation is robust enough so that propagating discontinuities in the curvature or in the matter variables do not prevent us from constructing a spacetime whose curvature generically blows-up on the future boundary. Earlier work on the problem studied here was restricted to sufficiently regular and vacuum spacetimes.
description: 43 pages
Chapter 6: The Kiwaian Language Family
Creators: name: Wurm, S.A. (Ed.)
Publisher: name: Pacific Linguistics
Year: 1973

description: CHAPTER 6: THE KIWAIAN LANGUAGE FAMILY. 217 6.1. Introductory Remarks 219 6.2. Notes on the History of Research into Kiwaian Languages 219 6.3. The Composition of the Kiwaian Family 221 6.4. Internal Classification of the Kiwaian Languages 223MAP 5 - The Kiwaian Language Family 224 6.5. Typological and Structural Features of Kiwaian Languages 226 6.51. Phonology 226 6.52. Morphology (and Syntax) 226 6.52.1. Introductory Remarks 226 6.52.2. Main Morphological (and Syntax) Features 227 6.6. Remarks on the Individual Kiwaian Languages and Dialects 233 6.61. Southern Kiwai 233 6.61.1 Coastal Kiwai Dialects 234 6.61.2. Daru Kiwai 235 6.61.3. Island Kiwai 235 6.61.4. Doumori 236 6.62. Wabuda 237 6.63. Bamu Kiwai 240 6.63.1. Sisiame Dialect 241 6.63.2. Pirupiru Dialect 241 6.63.3. Middle Bamu Dialect 241 6.63.4. Notes on Bamu Kiwai 241 6.64. Morigi 243 6.65. Kerewo 244 6.66. North-Eastern Kiwai 248 6.66.1. Urama Dialect 248 6.66.2. Gope Dialect 249 6.66.3. Gibaio Dialect 249 6.66.4. Notes on North-Eastern Kiwai 249 6.67. Arigibi 251 6.7. Kiwiian Language Migrations in the Past 251 6.8. Wider Connections of the Kiwaian Languages 253APPENDIX 256BIBLIOGRAPHY 258
Additional file 1 of Using health administrative data to model associations and predict hospital admissions and length of stay for people with eating disorders
Creators: name: Kim, Marcellinus
name: Holton, Matthew
name: Sweeting, Arianne
name: Koreshe, Eyza
name: McGeechan, Kevin
name: Miskovic-Wheatley, Jane
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer

description: Supplementary Material 1
Dragging $D$ mesons by hot hadrons
Creators: name: Ghosh, Sabyasachi
name: Das, Santosh K
name: Sarkar, Sourav
name: Alam, Jan-e
Publisher: name: arXiv
Year: 2011
Subjects: subject: Nuclear Theory (nucl-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We evaluate the drag and diffusion coefficients of a hot hadronic medium consisting of pions, nucleons, kaons and eta using open charm mesons as a probe. The interaction of the probe with the hadronic matter has been treated in the framework of effective field theory. It is observed that the magnitude of both the transport coefficients are significant, indicating substantial amount of interaction of the heavy mesons with the thermal hadronic system. The results may have noticeable impact on the experimental observable like the suppression of single electron spectra originating form the decays of heavy mesons in nuclear collisions at relativistic energies.
description: One Latex and three eps files, form factor effects included
Parametric Level Set Methods for Inverse Problems
Creators: name: Aghasi, Alireza
name: Kilmer, Misha
name: Miller, Eric L.
Publisher: name: arXiv
Year: 2010
Subjects: subject: Analysis of PDEs (math.AP)
subject: Mathematical Physics (math-ph)
subject: Geophysics (physics.geo-ph)
subject: FOS: Mathematics
subject: FOS: Physical sciences

description: In this paper, a parametric level set method for reconstruction of obstacles in general inverse problems is considered. General evolution equations for the reconstruction of unknown obstacles are derived in terms of the underlying level set parameters. We show that using the appropriate form of parameterizing the level set function results a significantly lower dimensional problem, which bypasses many difficulties with traditional level set methods, such as regularization, re-initialization and use of signed distance function. Moreover, we show that from a computational point of view, low order representation of the problem paves the path for easier use of Newton and quasi-Newton methods. Specifically for the purposes of this paper, we parameterize the level set function in terms of adaptive compactly supported radial basis functions, which used in the proposed manner provides flexibility in presenting a larger class of shapes with fewer terms. Also they provide a "narrow-banding" advantage which can further reduce the number of active unknowns at each step of the evolution. The performance of the proposed approach is examined in three examples of inverse problems, i.e., electrical resistance tomography, X-ray computed tomography and diffuse optical tomography.
Revivals in the attractive BEC in a double-well potential and their decoherence
Creators: name: Pawlowski, Krzysztof
name: Zin, Pawel
name: Rzazewski, Kazimierz
name: Trippenbach, Marek
Publisher: name: arXiv
Year: 2010
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We study the dynamics of ultracold attractive atoms in a weakly linked two potential wells. We consider an unbalanced initial state and monitor dynamics of the population difference between the two wells. The average imbalance between wells undergoes damped oscillations, like in a classical counterpart, but then it revives almost to the initial value. We explain in details the whole behavior using three different models of the system. Furthermore we investigate the sensitivity of the revivals on the decoherence caused by one- and three-body losses. We include the dissipative processes using appropriate master equations and solve them using the stochastic wave approximation method.
Additional file 1 of Characteristics of the pulmonary opacities on chest CT associated with difficulty in short-term liberation from veno-venous ECMO in patients with severe ARDS
Creators: name: Nishikimi, Mitsuaki
name: Ohshimo, Shinichiro
name: Fukumoto, Wataru
name: Anzai, Tatsuhiko
name: Awai, Kazuo
name: Ogura, Takayuki
name: Abe, Toshikazu
name: Masuda, Mamoru
name: Fujizuka, Kenji
name: Nakamura, Mitsunobu
name: Kyo, Michihito
name: Takahashi, Kunihiko
name: Shime, Nobuaki
Publisher: name: figshare
Year: 2023
Subjects: subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Neuroscience
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Supplementary Table 1: Concordance rates between two evaluators
Quasi-classical asymptotics for pseudo-differential operators with discontinuous symbols: Widom's Conjecture
Creators: name: Sobolev, Alexander V.
Publisher: name: arXiv
Year: 2010
Subjects: subject: Spectral Theory (math.SP)
subject: Mathematical Physics (math-ph)
subject: FOS: Mathematics
subject: FOS: Physical sciences

description: Relying on the known two-term quasiclassical asymptotic formula for the trace of the function $f(A)$ of a Wiener-Hopf type operator $A$ in dimension one, in 1982 H. Widom conjectured a multi-dimensional generalization of that formula for a pseudo-differential operator $A$ with a symbol $a(\bx, \bxi)$ having jump discontinuities in both variables. In 1990 he proved the conjecture for the special case when the jump in any of the two variables occurs on a hyperplane. The present paper gives a proof of Widom's Conjecture under the assumption that the symbol has jumps in both variables on arbitrary smooth bounded surfaces.
description: A few typos have been corrected. Sections 9, 10, 11 have been edited, results are the same. New theorem 11.1. Added new references
Shining new light on cyanobacteria genomes
Creators: name: Qiu, Yilin
Publisher: name: University of British Columbia
Year: 2022

description: The manipulation of gene activity in cyanobacteria offers the possibility of producing energy and materials directly from sunlight, water and carbon dioxide, contributing to food production, innovative bioproducts and reliable bioenergy solutions that reduce human carbon emissions. However, current applications of cyanobacteria for these purposes remain in early stages of development. A limited capacity to study and control genetic information in many strains is a barrier to both optimizing metabolic flux through central metabolic pathways and programming these pathways for production of user defined products at industrial scales. Additionally, even in strains that have successfully been engineered for production of various commodity compounds, such as Synechocystis and Synechococcus, limitations in scalability and knowledge of carbon processing pathways continue to stymie industrial applications. This thesis is focused on genome sequencing of an industrial cyanobacterial strain called AB48 a strain optimized to grow as a biofilm using modular photobioreactors developed by AlgaBloom International Ltd, a local biotechnology company. These biofilm-based photobioreactors employ proprietary substrate-based growth paradigms that permit minimal water and energy consumption, while maximizing bioreactor productivity. The AB48 genome was initially sequenced directly from photobioreactor biomass on the PacBio platform at the DOE Joint Genome Institute. In the process of assembling and annotating the genome, additional metagenome assembled genomes (MAGs) associated with co-occurring microorganisms and mobile genetic elements (MGEs) including plasmids and phage were identified. An AB48 strain was later isolated and sequenced on the Illumina HiSeq and Oxford Nanopore MinION platforms. After hybrid assembly a complete closed reference genome and plasmid sequence were resolved, enabling formal classification of AB48 as a new species within the genus Phormidium called Phormidium yuhuli AB48. Encouraged by these results, efforts were made to reassemble and analyze raw sequencing data from other cyanobacterial genome sequencing projects with an eye toward identifying co-occurring microorganisms and MGEs. Typically, sequence information associated with co-cultured bacteria is not reported in published cyanobacterial genome reports despite the potential for uncovering known or novel interactions. The resulting MAGs for cyanobacteria, co-occurring microorganisms and MGEs provide a lineage-resolved resource of biological parts and putative metabolic interactions for sustainable bioproduction and biotechnology innovation.
Additional file 4 of Hyaluronic acid modified covalent organic polymers for efficient targeted and oxygen-evolved phototherapy
Creators: name: Fangpeng Shu
name: Taowei Yang
name: Xuefeng Zhang
name: Wenbin Chen
name: Kaihui Wu
name: Junqi Luo
name: Xumin Zhou
name: Guochang Liu
name: Jianming Lu
name: Mao, Xiangming
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 4: Figure S3. (A) Temperature change of ICG@FeD dispersions exposed to photothermal heating and natural cooling cycles under 808 nm laser irradiation. (B) Measurement of photothermal conversion efficiency of ICG@FeD at 808 nm.
Reflection in Seyfert Galaxies and the Unified Model of AGN
Creators: name: Ricci, Claudio
name: Walter, Roland
name: Courvoisier, Thierry J. -L.
name: Paltani, Stephane
Publisher: name: arXiv
Year: 2011
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: We present a deep study of the average hard X-ray spectra of Seyfert galaxies. We analyzed all public INTEGRAL IBIS/ISGRI data available on all the 165 Seyfert galaxies detected at z<0.2. Our final sample consists of 44 Seyfert 1's, 29 Seyfert 1.5's, 78 Seyfert 2's, and 14 Narrow Line Seyfert 1's. We derived the average hard X-ray spectrum of each subsample in the 17-250keV energy range. All classes of Seyfert galaxies show on average the same nuclear continuum, as foreseen by the zeroth order unified model, with a cut-off energy of Ec>200keV, and a photon index of Gamma ~1.8. Compton-thin Seyfert 2's show a reflection component stronger than Seyfert 1's and Seyfert 1.5's. Most of this reflection is due to mildly obscured (10^23 cm^-2 < NH < 10^24 cm^-2) Seyfert 2's, which have a significantly stronger reflection component (R=2.2^{+4.5}_{-1.1}) than Seyfert 1's (R<=0.4), Seyfert 1.5's (R<= 0.4) and lightly obscured (NH < 10^23 cm^-2) Seyfert 2's (R<=0.5). This cannot be explained easily by the unified model. The absorber/reflector in mildly obscured Seyfert 2's might cover a large fraction of the X-ray source, and have clumps of Compton-thick material. The large reflection found in the spectrum of mildly obscured Seyfert 2's reduces the amount of Compton-thick objects needed to explain the peak of the cosmic X-ray background. Our results are consistent with the fraction of Compton-thick sources being ~10%. The spectra of Seyfert 2's with and without polarized broad lines do not show significant differences, the only difference between the two samples being the higher hard X-ray and bolometric luminosity of Seyfert 2's with polarized broad lines. The average hard X-ray spectrum of Narrow line Seyfert 1's is steeper than those of Seyfert 1's and Seyfert 1.5's, probably due to a lower energy of the cutoff.
description: 19 pages, accepted for publication in Astronomy and Astrophysics, final version
Additional file 2 of Hyaluronic acid modified covalent organic polymers for efficient targeted and oxygen-evolved phototherapy
Creators: name: Fangpeng Shu
name: Taowei Yang
name: Xuefeng Zhang
name: Wenbin Chen
name: Kaihui Wu
name: Junqi Luo
name: Xumin Zhou
name: Guochang Liu
name: Jianming Lu
name: Mao, Xiangming
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 2: Figure S1. The photographs of ICG@FeDH dispersion (left) before and (right) after high-speed centrifugation. The loaded ICG is precipitated together with FeDH and no obvious green color can be observed in supernatant solution, indicating the efficient loading of ICG.
Evaluation of the impact of crop residue on fractional vegetation cover estimation by vegetation indices over conservation tillage cropland: a simulation study
Creators: name: Dai, Zewen
name: Ding, Yanling
name: Xu, Chi
name: Chen, Yunchao
name: Liu, Lin
Publisher: name: Taylor & Francis
Year: 2022
Subjects: subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Plant Biology

description: Accurate estimation of fractional vegetation cover (FVC) is of great significance to agricultural production. Crop residue management affect crop residue cover (CRC) over croplands. Crop and crop residue on the soil surface both contribute to overall canopy reflectance. Few studies, however, have examined the effect of crop residue on vegetation indices (VIs) and estimated FVC. The present study evaluated the response of eight commonly used VIs to crop residues and FVC uncertainty caused by crop residue based on the dimidiate pixel model (DPM) by using simulated reflectance of low-tilled cropland via a three-dimensional radiative transfer model. The absolute difference (AD) was used to quantify the spectral difference between crop residues and soils in red and near infrared wavelengths. Increases in normalized difference VI (NDVI), ratio VI (RVI), transformed soil-adjusted VI (TSAVI), and normalized difference phenology index (NDPI) were observed when green crops were mixed with crop residue that had negative ADs with soils, but decreases in enhance VI (EVI), perpendicular VI (PVI), SAVI, and litter-soil-adjusted VI (L-SAVI) were observed when crop residue was present under medium and high vegetation cover. The presence of crop residue with a positive AD with soils reduced NDVI, RVI, TSAVI, and NDPI while increased the other VIs. Crop residue had the least impact on EVI- and SAVI-based DPMs, with FVC-estimated uncertainty less than 0.1, followed by the NDPI- and L-SAVI-based model, while DPMs based on NDVI- and RVI performed poorly. Each VI-based DPM’s estimated uncertainty was highly correlated with AD values. Furthermore, the majority of the VI-based models were sensitive to solar position except for the NDPI-based model. Our findings highlight the need of considering the impact of crop residue on FVC retrieval over low-tilled cropland in future research.
Parameterizing by the Number of Numbers
Creators: name: Fellows, Michael R.
name: Gaspers, Serge
name: Rosamond, Frances A.
Publisher: name: arXiv
Year: 2010
Subjects: subject: Data Structures and Algorithms (cs.DS)
subject: Discrete Mathematics (cs.DM)
subject: FOS: Computer and information sciences

description: The usefulness of parameterized algorithmics has often depended on what Niedermeier has called, "the art of problem parameterization". In this paper we introduce and explore a novel but general form of parameterization: the number of numbers. Several classic numerical problems, such as Subset Sum, Partition, 3-Partition, Numerical 3-Dimensional Matching, and Numerical Matching with Target Sums, have multisets of integers as input. We initiate the study of parameterizing these problems by the number of distinct integers in the input. We rely on an FPT result for ILPF to show that all the above-mentioned problems are fixed-parameter tractable when parameterized in this way. In various applied settings, problem inputs often consist in part of multisets of integers or multisets of weighted objects (such as edges in a graph, or jobs to be scheduled). Such number-of-numbers parameterized problems often reduce to subproblems about transition systems of various kinds, parameterized by the size of the system description. We consider several core problems of this kind relevant to number-of-numbers parameterization. Our main hardness result considers the problem: given a non-deterministic Mealy machine M (a finite state automaton outputting a letter on each transition), an input word x, and a census requirement c for the output word specifying how many times each letter of the output alphabet should be written, decide whether there exists a computation of M reading x that outputs a word y that meets the requirement c. We show that this problem is hard for W[1]. If the question is whether there exists an input word x such that a computation of M on x outputs a word that meets c, the problem becomes fixed-parameter tractable.
Additional file 6 of Hyaluronic acid modified covalent organic polymers for efficient targeted and oxygen-evolved phototherapy
Creators: name: Fangpeng Shu
name: Taowei Yang
name: Xuefeng Zhang
name: Wenbin Chen
name: Kaihui Wu
name: Junqi Luo
name: Xumin Zhou
name: Guochang Liu
name: Jianming Lu
name: Mao, Xiangming
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 6: Figure S5. Quantification of HIF-α expression in tumor slices from different groups. **P<0.01..
TRIPLE Deliverable: D5.1 Report on Third-Party Applications Integration
Creators: name: De Santis, Luca
Publisher: name: Zenodo
Year: 2021
Subjects: SSH
social sciences and humanities
research infrastructure
OPERAS
TRIPLE

description: This document presents the activities performed in the task T5.1 of the TRIPLE project until month M24. T5.1 focuses on the integration of third-party applications in the GoTriple Discovery Platform. Several tasks have been performed in this regard in the period under consideration. To start with, a significant effort was devoted to analyse the integration of a Crowdfunding service for SSH researchers. We recognise in fact that such a tool can constitute an agile and an effective opportunity to find financial sources for a particular kind of research activities, e.g. small projects, which can be accomplished with limited investments but need quick timings to be performed successfully. This integration has been analysed in full, not only analysing the possible implementation scenarios but especially by taking in considerations all the organizational aspects, including governance, financial, legal and fiscal issues, made even more complicated in an international context as those of the GoTriple platform. Two specific assignments have been given to external partners: one to WelcomEurope, for the analysis of all the possible issues to consider when operating a platform dedicated to financing SSH research projects; another to Wemakeit, the company which will operate the TRIPLE Crowdfunding service until the end of the project. The work in T5.1 didn’t stop here: through user research, other third-party tools to integrate in GoTriple have been identified, namely: a metrics service, to obtain data about the impact of a publication; a translation service, to guarantee that every content published in GoTriple has always a description in English. Finally, the integration of widely used bookmarking tools, that allow users to manage bibliographic references of publications, will be also pursued: a supplement of analysis will be done in the following months to identify the possible integration scenarios and to select the actual tools to support in GoTriple. The integration with third-party apps is therefore an ongoing process: the presentation of the final scenario will be provided at month M40, in the updated release of this deliverable.
description: The deliverable awaits official approval by the Project Officer. --- The TRIPLE project (https://project.gotriple.eu/), which is financed under the Horizon 2020 framework (https://cordis.europa.eu/project/id/863420), under Grant Agreement No. 863420, with approx. 5.6 million Euros for a duration of 42 months (2019-2023). --- At the heart of the project is the development of the GoTriple platform (https://www.gotriple.eu/), an innovative multilingual and multicultural discovery solution.