cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1 of Aligned electrospun fiber film loaded with multi-enzyme mimetic iridium nanozymes for wound healing
Creators: name: Wu, Boda
name: Yang, Jintao
name: Zu, Yan
name: Chi, Junjie
name: Shi, Keqing
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Cancer
subject: Plasma Physics
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Additional file 1: Figure S1. Diameter distribution analysis from 100 random nanofibers of (a) GelMA/R, (b) GelMA/A, and (c) Ir@GelMA/A. Figure S2. The ICP-MS analysis of various concentrations of PVP-Ir NPs loaded hydrogel fiber films. Figure S3. (a) The UV absorbance spectra of 20 mM H2O2 solution treated with 5 μg/mL Catalase. (b) The UV-vis absorption value at 240 nm of 20 mM H2O2 solutions treated with 5 μg/mL Catalase. Figure S4. The digital pictures of various groups before (a) and after (b) 5 mM H2O2 treated. I: Blank + 5mM H2O2; II: GelMA/A + 5mM H2O2; III: Ir@GelMA/A + 5mM H2O2. The red arrows refer to the GelMA/A fiber films, and the blue arrows refer to the Ir@GelMA/A fiber films. Figure S5. The concentration of the generated oxygen in Control, GelMA/A, and various Ir@GelMA/A groups. Figure S6. The angle distribution of cells growing on the (a) Culture plate (Control), (b) GelMA/R, (c) GelMA/A, and (d) Ir@GelMA/A fiber film. Figure S7. SEM image of Ir@Ag@GelMA/A fiber film. The scale bar is 2 μm. Figure S8. The effect of inducing cell orientation growth of the fiber film before and after loading with Ag NPs.
Dusty Blue Supergiants: News from High-Angular Resolution Observations
Creators: name: de Wit, Willem-Jan
name: Oudmaijer, Rene
name: Vink, Jorick
Publisher: name: arXiv
Year: 2014
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: An overview is presented of the recent advances in understanding the B[e] phenomenon among blue supergiant stars in light of high-angular resolution observations and with an emphasis on the results obtained by means of long baseline optical stellar interferometry. The focus of the review is on the circumstellar material and evolutionary phase of B[e] supergiants, but recent results on dust production in regular blue supergiants are also highlighted.
description: 8 pages, 2 figures. Published in "Advances in Astronomy" by Hindawi Publishing Corporation
Additional file 26 of Impact of plants on the diversity and activity of methylotrophs in soil
Creators: name: Macey, Michael C.
name: Pratscher, Jennifer
name: Crombie, Andrew T.
name: J. Colin Murrell
Publisher: name: figshare
Year: 2020
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Plant Biology

description: Additional file 25. Relative abundance of genera detected as labelled in 16S rRNA gene profiles of the 350 ppmv supplied test groups.
48CK302-459, Side Notched Point, Side 1
Creators: name: (:Unkn) Unknown
Publisher: name: University of Wyoming
Year: 2023
Subjects: Projectile Point
Side Notched
Quartzite
Vore Buffalo Jump
Bison
Bison Jump
Mass Kill Site
Archaeological Site
Northwest Plains Tribes
Sinkhole
Wyoming
Prehistoric
Archaeology

description: Image of a purple quartzite side notched projectile point, missing the base. Refits with CK302-434. Provenience: N1-?-43.2"
Additional file 10 of Structural tissue damage and 24-month progression of semi-quantitative MRI biomarkers of knee osteoarthritis in the IMI-APPROACH cohort
Creators: name: Roemer, Frank W.
name: Jansen, Mylène
name: Marijnissen, Anne C. A.
name: Guermazi, Ali
name: Heiss, Rafael
name: Maschek, Susanne
name: Lalande, Agnes
name: Blanco, Francisco J.
name: Berenbaum, Francis
name: van de Stadt, Lotte A.
name: Kloppenburg, Margreet
name: Haugen, Ida K.
name: Ladel, Christoph H.
name: Bacardit, Jaume
name: Wisser, Anna
name: Eckstein, Felix
name: Lafeber, Floris P. J. G.
name: Weinans, Harrie H.
name: Wirth, Wolfgang
Publisher: name: figshare
Year: 2022
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Ecology

description: Additional file 10.
Additional file 24 of Impact of plants on the diversity and activity of methylotrophs in soil
Creators: name: Macey, Michael C.
name: Pratscher, Jennifer
name: Crombie, Andrew T.
name: J. Colin Murrell
Publisher: name: figshare
Year: 2020
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Plant Biology

description: Additional file 23. NMDS plot showing the unweighted unifrac analysis of 16S rRNA gene amplicons produced from DNA extracted from unenriched soils, soils enriched with methanol and rhizosphere soils supplemented with 1000 ppm and 350 ppm carbon dioxide.
title: Interactively learning behavior trees from imperfect human demonstrations
Creators: name: Scherf, Lisa
name: Schmidt, Aljoscha
name: Pal, Suman
name: Koert, Dorothea
Publisher: name: Frontiers Media S.A.
Year: 2023

description: Introduction: In Interactive Task Learning (ITL), an agent learns a new task through natural interaction with a human instructor. Behavior Trees (BTs) offer a reactive, modular, and interpretable way of encoding task descriptions but have not yet been applied a lot in robotic ITL settings. Most existing approaches that learn a BT from human demonstrations require the user to specify each action step-by-step or do not allow for adapting a learned BT without the need to repeat the entire teaching process from scratch. Method: We propose a new framework to directly learn a BT from only a few human task demonstrations recorded as RGB-D video streams. We automatically extract continuous pre- and post-conditions for BT action nodes from visual features and use a Backchaining approach to build a reactive BT. In a user study on how non-experts provide and vary demonstrations, we identify three common failure cases of an BT learned from potentially imperfect initial human demonstrations. We offer a way to interactively resolve these failure cases by refining the existing BT through interaction with a user over a web-interface. Specifically, failure cases or unknown states are detected automatically during the execution of a learned BT and the initial BT is adjusted or extended according to the provided user input. Evaluation and results: We evaluate our approach on a robotic trash disposal task with 20 human participants and demonstrate that our method is capable of learning reactive BTs from only a few human demonstrations and interactively resolving possible failure cases at runtime.
Magnified image of CK302-14347 with root etching on bison sacrum
Creators: name: (:Unkn) Unknown
Publisher: name: University of Wyoming
Year: 2023
Subjects: Sacrum
Root Etching
Vore Buffalo Jump
Bison
Bison Jump
Mass Kill Site
Archaeological Site
Northwest Plains Tribes
Sinkhole
Wyoming
Prehistoric
Archaeology

description: Sacrum cranial aspect at 7.6 magnification.
Astrophysical weak-interaction rates for selected $A=20$ and $A=24$ nuclei
Creators: name: Martínez-Pinedo, G.
name: Lam, Y. H.
name: Langanke, K.
name: Zegers, R. G. T.
name: Sullivan, C.
Publisher: name: arXiv
Year: 2014
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: Nuclear Experiment (nucl-ex)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We have evaluated the electron capture rates on $^{20}$Ne, $^{20}$F, $^{24}$Mg, $^{24}$Na and the $β$ decay rates for $^{20}$F and $^{24}$Na at temperature and density conditions relevant for the late-evolution stages of stars with $M=8$-12 M$_\odot$. The rates are based on recent experimental data and large-scale shell model calculations. We show that the electron capture rates on $^{20}$Ne, $^{24}$Mg and the $^{20}$F, $^{24}$Na $β$-decay rates are based on data in this astrophysical range, except for the capture rate on $^{20}$Ne, which we predict to have a dominating contribution from the second-forbidden transition between the $^{20}$Ne and $^{20}$F ground states in the density range $\log ρY_e (\mathrm{g~cm}^{-3}) = 9.3$-9.6. The dominance of a few individual transitions allows us to present the various rates by analytical expressions at the relevant astrophysical conditions. We also derive the screening corrections to the rates.
description: 21 pages, 12 figures
Additional file 27 of Impact of plants on the diversity and activity of methylotrophs in soil
Creators: name: Macey, Michael C.
name: Pratscher, Jennifer
name: Crombie, Andrew T.
name: J. Colin Murrell
Publisher: name: figshare
Year: 2020
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Plant Biology

description: Additional file 26. Relative abundance of genera detected as labelled in 16S rRNA gene profiles of the 1000 ppmv supplied test groups.
48CK302-549, Flake Knife Fragment, Side 2
Creators: name: (:Unkn) Unknown
Publisher: name: University of Wyoming
Year: 2023
Subjects: Stone Tool
Flake Knife
Quartzite
Vore Buffalo Jump
Bison
Bison Jump
Mass Kill Site
Archaeological Site
Northwest Plains Tribes
Sinkhole
Wyoming
Prehistoric
Archaeology

description: Image of a tan quartzite flake knife fragment. Provenience: W4-?-1
48CK302-484, Tri-Notched Point, Side 2
Creators: name: (:Unkn) Unknown
Publisher: name: University of Wyoming
Year: 2023
Subjects: Projectile Point
Tri-Notched
Porcellanite
Vore Buffalo Jump
Bison
Bison Jump
Mass Kill Site
Archaeological Site
Northwest Plains Tribes
Sinkhole
Wyoming
Prehistoric
Archaeology

description: Image of a brown porcellanite tri-notched projectile point, complete. Provenience: W1-10-top of the bone level
Additional file 1 of Structural tissue damage and 24-month progression of semi-quantitative MRI biomarkers of knee osteoarthritis in the IMI-APPROACH cohort
Creators: name: Roemer, Frank W.
name: Jansen, Mylène
name: Marijnissen, Anne C. A.
name: Guermazi, Ali
name: Heiss, Rafael
name: Maschek, Susanne
name: Lalande, Agnes
name: Blanco, Francisco J.
name: Berenbaum, Francis
name: van de Stadt, Lotte A.
name: Kloppenburg, Margreet
name: Haugen, Ida K.
name: Ladel, Christoph H.
name: Bacardit, Jaume
name: Wisser, Anna
name: Eckstein, Felix
name: Lafeber, Floris P. J. G.
name: Weinans, Harrie H.
name: Wirth, Wolfgang
Publisher: name: figshare
Year: 2022
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Ecology

description: Additional file 1.
Magnified image of CK302-16906 with cut marks on bison astragalus
Creators: name: (:Unkn) Unknown
Publisher: name: University of Wyoming
Year: 2023
Subjects: Astragalus
Cut Marks
Vore Buffalo Jump
Bison
Bison Jump
Mass Kill Site
Archaeological Site
Northwest Plains Tribes
Sinkhole
Wyoming
Prehistoric
Archaeology

description: Astragalus lateral aspect at 17.4 magnification.
Magnified image of CK302-7140 with bone tool working surface on bison Metatarsal
Creators: name: (:Unkn) Unknown
Publisher: name: University of Wyoming
Year: 2023
Subjects: Metatarsal
Polishing
Bone Tool
Vore Buffalo Jump
Bison
Bison Jump
Mass Kill Site
Archaeological Site
Northwest Plains Tribes
Sinkhole
Wyoming
Prehistoric
Archaeology

description: Metatarsal posterior medial aspect at 9.0 magnification.
48CK302-507, Side Notched Point, Side 2
Creators: name: (:Unkn) Unknown
Publisher: name: University of Wyoming
Year: 2023
Subjects: Projectile Point
Side Notched
Quartzite
Vore Buffalo Jump
Bison
Bison Jump
Mass Kill Site
Archaeological Site
Northwest Plains Tribes
Sinkhole
Wyoming
Prehistoric
Archaeology

description: Image of a purple quartzite side notched projectile point, missing the distal end. Provenience: W2-?-65" Screen
Multi-Topic Multi-Document Summarizer
Creators: name: El-Ghannam, Fatma
name: El-Shishtawy, Tarek
Publisher: name: arXiv
Year: 2014
Subjects: subject: Computation and Language (cs.CL)
subject: FOS: Computer and information sciences

description: Current multi-document summarization systems can successfully extract summary sentences, however with many limitations including: low coverage, inaccurate extraction to important sentences, redundancy and poor coherence among the selected sentences. The present study introduces a new concept of centroid approach and reports new techniques for extracting summary sentences for multi-document. In both techniques keyphrases are used to weigh sentences and documents. The first summarization technique (Sen-Rich) prefers maximum richness sentences. While the second (Doc-Rich), prefers sentences from centroid document. To demonstrate the new summarization system application to extract summaries of Arabic documents we performed two experiments. First, we applied Rouge measure to compare the new techniques among systems presented at TAC2011. The results show that Sen-Rich outperformed all systems in ROUGE-S. Second, the system was applied to summarize multi-topic documents. Using human evaluators, the results show that Doc-Rich is the superior, where summary sentences characterized by extra coverage and more cohesion.
Pixelated Geiger-Mode Avalanche Photo-Diode Characterization through Dark Current Measurement
Creators: name: Amaudruz, Pierre-André
name: Bishop, Daryl
name: Gilhully, Colleen
name: Goertzen, Andrew
name: James, Lloyd
name: Kozlowski, Piotr
name: Retière, Fabrice
name: Shams, Ehsan
name: Sossi, Vesna
name: Stortz, Greg
name: Thiessen, Jonathan D.
name: Thompson, Christopher J.
Publisher: name: arXiv
Year: 2013
Subjects: subject: Instrumentation and Detectors (physics.ins-det)
subject: FOS: Physical sciences

description: PIXELATED geiger-mode avalanche photodiodes(PPDs), often called silicon photomultipliers (SiPMs) are emerging as an excellent replacement for traditional photomultiplier tubes (PMTs) in a variety of detectors, especially those for subatomic physics experiments, which requires extensive test and operation procedures in order to achieve uniform responses from all the devices. In this paper, we show for two PPD brands, Hamamatsu MPPC and SensL SPM, that the dark noise rate, breakdown voltage and rate of correlated avalanches can be inferred from the sole measure of dark current as a function of operating voltage, hence greatly simplifying the characterization procedure. We introduce a custom electronics system that allows measurement for many devices concurrently, hence allowing rapid testing and monitoring of many devices at low cost. Finally, we show that the dark current of Hamamastu Multi-Pixel Photon Counter (MPPC) is rather independent of temperature at constant operating voltage, hence the current measure cannot be used to probe temperature variations. On the other hand, the MPPC current can be used to monitor light source conditions in DC mode without requiring strong temperature stability, as long as the integrated source brightness is comparable to the dark noise rate.
description: 8 pages, 9 figures. Submitted to IEEE Transaction in Nuclear Science
48CK302-489, Tri-Notched Point, Side 2
Creators: name: (:Unkn) Unknown
Publisher: name: University of Wyoming
Year: 2023
Subjects: Projectile Point
Tri-Notched
Porcellanite
Vore Buffalo Jump
Bison
Bison Jump
Mass Kill Site
Archaeological Site
Northwest Plains Tribes
Sinkhole
Wyoming
Prehistoric
Archaeology

description: Image of a brown porcellanite tri-notched projectile point, complete. Provenience: S1-1-2.6"
A Game Theoretic Analysis of Collaboration in Wikipedia
Creators: name: Anand, S.
name: Arazy, Ofer
name: Mandayam, Narayan
name: Nov, Oded
Publisher: name: arXiv
Year: 2014
Subjects: subject: Computer Science and Game Theory (cs.GT)
subject: Social and Information Networks (cs.SI)
subject: Physics and Society (physics.soc-ph)
subject: FOS: Computer and information sciences
subject: FOS: Physical sciences

description: Peer production projects such as Wikipedia or open-source software development allow volunteers to collectively create knowledge based products. The inclusive nature of such projects poses difficult challenges for ensuring trustworthiness and combating vandalism. Prior studies in the area deal with descriptive aspects of peer production, failing to capture the idea that while contributors collaborate, they also compete for status in the community and for imposing their views on the product. In this paper we investigate collaborative authoring in Wikipedia where contributors append and overwrite previous contributions to a page. We assume that a contributors goal is to maximize ownership of content sections such that content owned (or originated) by her survived the most recent revision of the page. We model contributors interactions to increase their content ownership as a noncooperative game where a players utility is associated with content owned and cost is a function of effort expended. Our results capture several real life aspects of contributors interactions within peer production projects. We show that at the Nash equilibrium there is an inverse relationship between the effort required to make a contribution and the survival of a contributors content. In other words majority of the content that survives is necessarily contributed by experts who expend relatively less effort than non experts. An empirical analysis of Wikipedia articles provides support for our models predictions. Implications for research and practice are discussed in the context of trustworthy collaboration as well as vandalism.
description: 16 pages 5 figures 2 tables
Additional file 2 of Structural tissue damage and 24-month progression of semi-quantitative MRI biomarkers of knee osteoarthritis in the IMI-APPROACH cohort
Creators: name: Roemer, Frank W.
name: Jansen, Mylène
name: Marijnissen, Anne C. A.
name: Guermazi, Ali
name: Heiss, Rafael
name: Maschek, Susanne
name: Lalande, Agnes
name: Blanco, Francisco J.
name: Berenbaum, Francis
name: van de Stadt, Lotte A.
name: Kloppenburg, Margreet
name: Haugen, Ida K.
name: Ladel, Christoph H.
name: Bacardit, Jaume
name: Wisser, Anna
name: Eckstein, Felix
name: Lafeber, Floris P. J. G.
name: Weinans, Harrie H.
name: Wirth, Wolfgang
Publisher: name: figshare
Year: 2022
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Ecology

description: Additional file 2.
Improving deep representation learning for crystal structures by learning and hybridizing human-designed descriptors
Creators: name: Gong, Sheng
Publisher: name: figshare
Year: 2022
Subjects: Computational Chemistry

description: This folder contains all the datasets and trained models for the paper entitled: "Improving deep representation learning for crystal structures by learning and hybridizing human-designed descriptors". The preprint of the paper will be uploaded later.
 decgcnn: contains the revised CGCNN codes for the de-CGCNN. Please specify the feature list at the begnning of main.py and predict.py, and input the path of the descriptors file into the two scripts.
 dealignn: contains the revised ALIGNN codes for the de-ALIGNN. Please specify the feature list and path of the descriptors file at the begnning of fine-tuning.py Also, please put the script "degraph.py" at the path "/anaconda3/envs/ALIGNN/lib/python3.8/site-packages/jarvis/core" or similar path in your environment.
 datasets: contains all the datasets and test results. descriptors_mp: all descriptors of all structures in the MP database learning_descriptors: dataset for learning descriptors reported in Figure 2. mp_selected_prop.csv: dataset of all properties of all structures in the MP database all_kappa: all kappa from TEDesignLab database test_(model_name)_(prop_name/descriptor_name).csv: test set and prediction result of (prop_name/descriptor_name) from (model_name)
 trained_models: contains all the datasets and test results. (model_name)_(prop_name/descriptor_name).pt: trained model of (prop_name/descriptor_name) from (model_name)

 Please note that all properties from MP in test_XX.csv and from XX.pt are normalized. The normalizer can be found at datasets/normalizer.npy .
Holographic light quark jet quenching at RHIC and LHC via the shooting strings
Creators: name: Ficnar, Andrej
name: Gubser, Steven S.
name: Gyulassy, Miklos
Publisher: name: arXiv
Year: 2014
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: A new shooting string holographic model of jet quenching of light quarks in strongly coupled plasmas is presented to overcome the phenomenological incompatibilities of previous falling string holographic scenarios that emerged when confronted with the recent LHC data. This model is based on strings with finite momentum endpoints that start close to the horizon and lose energy as they approach the boundary. This framework is applied to compute the nuclear modification factor RAA of light hadrons at RHIC and LHC, showing that this model improves greatly the comparison with the recent light hadron suppression data. The effects of the Gauss-Bonnet quadratic curvature corrections to the AdS5 geometry further improve the agreement with the data.
description: 4 pages, 1 figure. Proceedings of the Hard Probes 2013 Conference
Magnified image of CK302-16409 with root etching on bison mandible
Creators: name: (:Unkn) Unknown
Publisher: name: University of Wyoming
Year: 2023
Subjects: Mandible
Root Etching
Vore Buffalo Jump
Bison
Bison Jump
Mass Kill Site
Archaeological Site
Northwest Plains Tribes
Sinkhole
Wyoming
Prehistoric
Archaeology

description: Mandible lingual aspect at 6.2 magnification.
Additional file 2 of Impact of plants on the diversity and activity of methylotrophs in soil
Creators: name: Macey, Michael C.
name: Pratscher, Jennifer
name: Crombie, Andrew T.
name: J. Colin Murrell
Publisher: name: figshare
Year: 2020
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Plant Biology

description: Additional file 1. 16S rRNA gene profiles of bacteria in unplanted, pea rhizosphere and wheat rhizosphere soils.
A strong radio brightening at the jet base of M87 during the elevated very-high-energy gamma-ray state in 2012
Creators: name: Hada, K.
name: Giroletti, M.
name: Kino, M.
name: Giovannini, G.
name: D'Ammando, F.
name: Cheung, C. C.
name: Beilicke, M.
name: Nagai, H.
name: Doi, A.
name: Akiyama, K.
name: Honma, M.
name: Niinuma, K.
name: Casadio, C.
name: Orienti, M.
name: Krawczynski, H.
name: Gomez, J. L.
name: Sawada-Satoh, S.
name: Koyama, S.
name: Cesarini, A.
name: Nakahara, S.
name: Gurwell, M. A.
Publisher: name: arXiv
Year: 2014
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We report our intensive radio monitoring observations of the jet in M87 with the VLBI Exploration of Radio Astrometry (VERA) and the European VLBI Network (EVN) from February 2011 to October 2012, together with contemporaneous high-energy gamma-ray light curves obtained by the Fermi-LAT. During this period, an elevated level of the M87 flux is reported at VHE gamma rays. We detected a remarkable increase of the radio flux density from the unresolved jet base (radio core) with VERA at 22 and 43GHz coincident with the VHE activity. Meanwhile, we confirmed with EVN at 5GHz that HST-1 (an alternative gamma-ray production candidate site) remained quiescent in terms of its flux density and structure. These results in the radio bands strongly suggest that the VHE gamma-ray activity in 2012 originates in the jet base within 0.03pc or 56 Schwarzschild radii from the central supermassive black hole. We further conducted VERA astrometry for the M87 core during the flaring period, and detected core shifts between 22 and 43GHz. We also discovered a clear frequency-dependent evolution of the radio core flare at 43, 22 and 5GHz; the radio flux density increased more rapidly at higher frequencies with a larger amplitude, and the light curves clearly showed a time-lag between the peaks at 22 and 43GHz. This indicates that a new radio-emitting component was created near the black hole in the period of the VHE event, and then propagated outward with progressively decreasing synchrotron opacity. By combining these results, we estimated an apparent speed of the newborn component, and derived a sub-luminal speed of less than ~0.2c. This value is significantly slower than the super-luminal (~1.1c) features that appeared from the core during the prominent VHE flaring event in 2008, suggesting that the stronger VHE activity can be associated with the production of the higher Lorentz factor jet.
description: 29 pages, 5 figures, 3 tables, accepted for publication in ApJ
Additional file 3 of Impact of plants on the diversity and activity of methylotrophs in soil
Creators: name: Macey, Michael C.
name: Pratscher, Jennifer
name: Crombie, Andrew T.
name: J. Colin Murrell
Publisher: name: figshare
Year: 2020
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Plant Biology

description: Additional file 2. Relative abundance (%) of methylotrophic genera in 16S rRNA gene profile of soils.
48CK302-524, Retouched Flake Tool, Side 2
Creators: name: (:Unkn) Unknown
Publisher: name: University of Wyoming
Year: 2023
Subjects: Stone Tool
Retouched Flake
Quartzite
Vore Buffalo Jump
Bison
Bison Jump
Mass Kill Site
Archaeological Site
Northwest Plains Tribes
Sinkhole
Wyoming
Prehistoric
Archaeology

description: Image of a gray quartzite retouched flake tool, fragment. Provenience: W3-?-36" Screen
48CK302-410, Side Notched Point, Side 1
Creators: name: (:Unkn) Unknown
Publisher: name: University of Wyoming
Year: 2023
Subjects: Projectile Point
Side Notched
Quartzite
Vore Buffalo Jump
Bison
Bison Jump
Mass Kill Site
Archaeological Site
Northwest Plains Tribes
Sinkhole
Wyoming
Prehistoric
Archaeology

description: Image of a tan quartzite side notched projectile point, missing part of the distal end. Provenience: N1-1-5.8'
Magnified image of CK302-8049 with pathology on bison thoracic vertebrae
Creators: name: (:Unkn) Unknown
Publisher: name: University of Wyoming
Year: 2023
Subjects: Thoracic Vertebrae
Pathology
Vore Buffalo Jump
Bison
Bison Jump
Mass Kill Site
Archaeological Site
Northwest Plains Tribes
Sinkhole
Wyoming
Prehistoric
Archaeology

description: Thoracic vertebrae caudal aspect at 14.3 magnification.
Additional file 4 of Impact of plants on the diversity and activity of methylotrophs in soil
Creators: name: Macey, Michael C.
name: Pratscher, Jennifer
name: Crombie, Andrew T.
name: J. Colin Murrell
Publisher: name: figshare
Year: 2020
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Plant Biology

description: Additional file 3. Phylogeny of mxaF sequences retrieved from pea plant rhizosphere and unplanted soil.
Tracking Back the Solar Wind to its Photospheric Footpoints from Wind Observations -- A Statistical Study
Creators: name: Huang, C.
name: Yan, Y. Y.
name: Li, G.
name: Deng, Y. Y.
name: Tan, B. L.
Publisher: name: arXiv
Year: 2014
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: It is of great importance to track the solar wind back to its photospheric source region and identify the related current sheets; this will provide key information for investigating the origin and predictions of the solar wind. We report a statistical study relating the photospheric footpoint motion and in-situ observation of current sheets in the solar wind. We used the potential force-free source--surface (PFSS) model and the daily synoptic charts to trace the solar wind back from 1 AU, as observed by the Wind spacecraft, to the solar surface. As the footpoints move along the solar surface we obtain a time series of the jump times between different points. These jumps can be within a cell and between adjacent cells. We obtained the distribution of the jump times and the distribution for a subset of the jump times in which only jumps between adjacent cells were counted. For both cases, the distributions clearly show two populations. These distributions are compared with the distribution of in-situ current sheets reported in an earlier work of Miao Peng and Li (2011). Its implications on the origin of the current sheets are discussed.
description: 14 pages, 6 figures, accepted to publication in Solar Physics
Magnified image of CK302-11148 with polishing on bone tool from bison metatarsal
Creators: name: (:Unkn) Unknown
Publisher: name: University of Wyoming
Year: 2023
Subjects: Metatarsal
Polishing
Bone Tool
Vore Buffalo Jump
Bison
Bison Jump
Mass Kill Site
Archaeological Site
Northwest Plains Tribes
Sinkhole
Wyoming
Prehistoric
Archaeology

description: Metatarsal lateral anterior aspect at 7.0 magnification.
Additional file 3 of Structural tissue damage and 24-month progression of semi-quantitative MRI biomarkers of knee osteoarthritis in the IMI-APPROACH cohort
Creators: name: Roemer, Frank W.
name: Jansen, Mylène
name: Marijnissen, Anne C. A.
name: Guermazi, Ali
name: Heiss, Rafael
name: Maschek, Susanne
name: Lalande, Agnes
name: Blanco, Francisco J.
name: Berenbaum, Francis
name: van de Stadt, Lotte A.
name: Kloppenburg, Margreet
name: Haugen, Ida K.
name: Ladel, Christoph H.
name: Bacardit, Jaume
name: Wisser, Anna
name: Eckstein, Felix
name: Lafeber, Floris P. J. G.
name: Weinans, Harrie H.
name: Wirth, Wolfgang
Publisher: name: figshare
Year: 2022
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Ecology

description: Additional file 3.
Capture and isolation of highly-charged ions in a unitary Penning trap
Creators: name: Brewer, Samuel M
name: Guise, Nicholas D
name: Tan, Joseph N
Publisher: name: arXiv
Year: 2013
Subjects: subject: Atomic Physics (physics.atom-ph)
subject: FOS: Physical sciences

description: We recently used a compact Penning trap to capture and isolate highly-charged ions extracted from an electron beam ion trap (EBIT) at the National Institute of Standards and Technology (NIST). Isolated charge states of highly-stripped argon and neon ions with total charge $Q \geq 10$, extracted at energies of up to $4\times 10^3\,Q$ eV, are captured in a trap with well depths of $\,\approx (4\, {\rm to}\, 12)\,Q$ eV. Here we discuss in detail the process to optimize velocity-tuning, capture, and storage of highly-charged ions in a unitary Penning trap designed to provide easy radial access for atomic or laser beams in charge exchange or spectroscopic experiments, such as those of interest for proposed studies of one-electron ions in Rydberg states or optical transitions of metastable states in multiply-charged ions. Under near-optimal conditions, ions captured and isolated in such rare-earth Penning traps can be characterized by an initial energy distribution that is $\approx$ 60 times narrower than typically found in an EBIT. This reduction in thermal energy is obtained passively, without the application of any active cooling scheme in the ion-capture trap.
description: 10 pages, 11 figures, Accepted in Phys. Rev. A
Additional file 28 of Impact of plants on the diversity and activity of methylotrophs in soil
Creators: name: Macey, Michael C.
name: Pratscher, Jennifer
name: Crombie, Andrew T.
name: J. Colin Murrell
Publisher: name: figshare
Year: 2020
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Plant Biology

description: Additional file 27. PCR primers used in this study.
The Froude number for solitary water waves with vorticity
Creators: name: Wheeler, Miles H.
Publisher: name: arXiv
Year: 2014
Subjects: subject: Analysis of PDEs (math.AP)
subject: FOS: Mathematics

description: We consider two-dimensional solitary water waves on a shear flow with an arbitrary distribution of vorticity. Assuming that the horizontal velocity in the fluid never exceeds the wave speed and that the free surface lies everywhere above its asymptotic level, we give a very simple proof that a suitably defined Froude number $F$ must be strictly greater than the critical value $F=1$. We also prove a related upper bound on $F$, and hence on the amplitude, under more restrictive assumptions on the vorticity.
description: 19 pages
48CK302-18635, Side Notched Point, Side 1
Creators: name: (:Unkn) Unknown
Publisher: name: University of Wyoming
Year: 2023
Subjects: Projectile Point
Side Notched
Quartzite
Vore Buffalo Jump
Bison
Bison Jump
Mass Kill Site
Archaeological Site
Northwest Plains Tribes
Sinkhole
Wyoming
Prehistoric
Archaeology

description: Image of a gray quartzite side notched projectile point, complete. Provenience: N101 E101
Nonlinear evolution of tidally forced inertial waves in rotating fluid bodies
Creators: name: Favier, B.
name: Barker, A. J.
name: Baruteau, C.
name: Ogilvie, G. I.
Publisher: name: arXiv
Year: 2014
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: Fluid Dynamics (physics.flu-dyn)
subject: Geophysics (physics.geo-ph)
subject: FOS: Physical sciences

description: We perform one of the first studies into the nonlinear evolution of tidally excited inertial waves in a uniformly rotating fluid body, exploring a simplified model of the fluid envelope of a planet (or the convective envelope of a solar-type star) subject to the gravitational tidal perturbations of an orbiting companion. Our model contains a perfectly rigid spherical core, which is surrounded by an envelope of incompressible uniform density fluid. The corresponding linear problem was studied in previous papers which this work extends into the nonlinear regime, at moderate Ekman numbers (the ratio of viscous to Coriolis accelerations). By performing high-resolution numerical simulations, using a combination of pseudo-spectral and spectral element methods, we investigate the effects of nonlinearities, which lead to time-dependence of the flow and the corresponding dissipation rate. Angular momentum is deposited non-uniformly, leading to the generation of significant differential rotation in the initially uniformly rotating fluid, i.e. the body does not evolve towards synchronism as a simple solid body rotator. This differential rotation modifies the properties of tidally excited inertial waves, changes the dissipative properties of the flow, and eventually becomes unstable to a secondary shear instability provided that the Ekman number is sufficiently small. Our main result is that the inclusion of nonlinearities eventually modifies the flow and the resulting dissipation from what linear calculations would predict, which has important implications for tidal dissipation in fluid bodies. We finally discuss some limitations of our simplified model, and propose avenues for future research to better understand the tidal evolution of rotating planets and stars.
description: 17 pages, 17 figures, accepted for publication in MNRAS
MS3 – Website
Creators: name: Schelkle, Bettina
name: Kampshoff, Stephan
Publisher: name: Zenodo
Year: 2021

description: Milestone MS3 describes the Human Microbiome Action project website which is the public facing information portal for stakeholders. The website will be updated continuously throughout the project lifetime with input from all partners and will be maintained for a three-year period beyond the project duration.
Third-order chromatic dispersion stabilizes Kerr frequency combs
Creators: name: Parra-Rivas, Pedro
name: Gomila, Damia
name: Leo, Francois
name: Coen, Stephane
name: Gelens, Lendert
Publisher: name: arXiv
Year: 2014
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Using numerical simulations of an extended Lugiato-Lefever equation, we analyze the stability and nonlinear dynamics of Kerr frequency combs generated in microresonators and fiber resonators taking into account third-order dispersion effects. We show that cavity solitons underlying Kerr frequency combs, normally sensitive to oscillatory and chaotic instabilities, are stabilized in a wide range of parameter space by third-order dispersion. Moreover, we demonstrate how the snaking structure organizing compound states of multiple cavity solitons is qualitatively changed by third-order dispersion, promoting an increased stability of Kerr combs underlined by a single cavity soliton.
description: 4 pages and 4 figures
A Diagrammatic Kinetic Theory of Density Fluctuations in Simple Liquids in the Overdamped Limit. II. The One-Loop Approximation
Creators: name: Pilkiewicz, Kevin R.
name: Andersen, Hans C.
Publisher: name: arXiv
Year: 2013
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: A diagrammatic kinetic theory of density fluctuations in simple dense liquids at long times, described in the preceding paper, is applied to a high density Lennard-Jones liquid to calculate various equilibrium time correlation functions. The calculation starts from the general theory and makes two approximations. 1. The general diagrammatic expression for an irreducible memory kernel is approximated using a one-loop approximation. 2. The generalized Enskog projected propagator, which is required for the calculation, is approximated using a simple kinetic model for the hard sphere memory function. The coherent intermediate scattering function (CISF), the longitudinal current correlation function (LCCF), the transverse current correlation function (TCCF), the incoherent intermediate scattering function (IISF), and the incoherent longitudinal current correlation function (ILCCF) are calculated and compared with simulation results for the Lennard-Jones liquid at high density. The approximate theoretical results are in good agreement with the simulation data for the IISF for all wave vectors studied and for the CISF and LCCF for large wave vector. The approximate results are in poor agreement with the simulation data for the CISF, LCCF, and TCCF for small wave vectors because these functions are strongly affected by hydrodynamic fluctuations at small wave vector that are not well described by the simple kinetic model used. The possible implications of this approach for the study of liquids is discussed.
Magnified image of CK302-9732 with cut marks on bison ulna
Creators: name: (:Unkn) Unknown
Publisher: name: University of Wyoming
Year: 2023
Subjects: Ulna
Cut Marks
Vore Buffalo Jump
Bison
Bison Jump
Mass Kill Site
Archaeological Site
Northwest Plains Tribes
Sinkhole
Wyoming
Prehistoric
Archaeology

description: Ulna lateral aspect at 11.0 magnification.
Self trapping of a dipolar Bose-Einstein condensate in a double well
Creators: name: Adhikari, S. K.
Publisher: name: arXiv
Year: 2014
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: FOS: Physical sciences

description: We study the Josephson oscillation and self trapping dynamics of a cigar-shaped dipolar Bose-Einstein condensate of $^{52}$Cr atoms polarized along the symmetry axis of an axially-symmetric double-well potential using the numerical solution of a mean-field model, for dominating repulsive contact interaction (large positive scattering length a) over an anisotropic dipolar interaction. Josephson-type oscillation emerges for small and very large number of atoms, whereas self trapping is noted for an intermediate number of atoms. The dipolar interaction pushes the system away from self trapping towards Josephson oscillation. We consider a simple two-mode description for a qualitative understanding of the dynamics.
Magnified image of CK302-18176 with excavation damage on bison phalanx
Creators: name: (:Unkn) Unknown
Publisher: name: University of Wyoming
Year: 2023
Subjects: Phalanx
Excavation Damage
Vore Buffalo Jump
Bison
Bison Jump
Mass Kill Site
Archaeological Site
Northwest Plains Tribes
Sinkhole
Wyoming
Prehistoric
Archaeology

description: Distal phalanx anterior aspect at 18.2 magnification.
Additional file 4 of Structural tissue damage and 24-month progression of semi-quantitative MRI biomarkers of knee osteoarthritis in the IMI-APPROACH cohort
Creators: name: Roemer, Frank W.
name: Jansen, Mylène
name: Marijnissen, Anne C. A.
name: Guermazi, Ali
name: Heiss, Rafael
name: Maschek, Susanne
name: Lalande, Agnes
name: Blanco, Francisco J.
name: Berenbaum, Francis
name: van de Stadt, Lotte A.
name: Kloppenburg, Margreet
name: Haugen, Ida K.
name: Ladel, Christoph H.
name: Bacardit, Jaume
name: Wisser, Anna
name: Eckstein, Felix
name: Lafeber, Floris P. J. G.
name: Weinans, Harrie H.
name: Wirth, Wolfgang
Publisher: name: figshare
Year: 2022
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Ecology

description: Additional file 4.
Additional file 25 of Impact of plants on the diversity and activity of methylotrophs in soil
Creators: name: Macey, Michael C.
name: Pratscher, Jennifer
name: Crombie, Andrew T.
name: J. Colin Murrell
Publisher: name: figshare
Year: 2020
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Plant Biology

description: Additional file 24. Workflow schematic of the DNA-SIP with methanol, the DNA SIP with carbon dioxide and the sequencing and quantification of the methanol dehydrogenase genes and 16S rRNA gene from the soil habitats.
Magnified image of CK302-7230 with burn on bison bone fragment
Creators: name: (:Unkn) Unknown
Publisher: name: University of Wyoming
Year: 2023
Subjects: Bone Fragment
Burns
Vore Buffalo Jump
Bison
Bison Jump
Mass Kill Site
Archaeological Site
Northwest Plains Tribes
Sinkhole
Wyoming
Prehistoric
Archaeology

description: Bone fragment at 10.7 magnification.
Spectroscopic study of early-type multiple stellar systems II. New binary subsystems
Creators: name: Veramendi, M. E.
name: González, J. F.
Publisher: name: arXiv
Year: 2014
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: Context. This work is part of a long-term spectroscopic study of a sample of 30 multiple stars with early-type components. In this second paper we present the results of six multiple systems in which new stellar components have been detected. Aims. The main aim is to increase the knowledge of stellar properties and dynamical structure of early-type multiple stellar systems. Methods. Using spectroscopic observations taken over a time baseline of more than 5 years we measured RVs by cross-correlations and applied a spectral disentangling method to double-lined systems. Besides the discovery of objects with double-lined spectra, the existence of new spectroscopic subsystems have been inferred from the radial velocity variations of single-lined components and through the variation of the barycentric velocity of double-lined subsystems. Orbital elements have been calculated when possible. Results. Seven new stellar components and two members that we expect to confirm with new observations have been discovered in the six studied multiples. We present orbital parameters for two double-lined binaries and preliminary orbits for three single-lined spectroscopic binaries. Five of the six analysed systems are quadruples, while the remaining has five components distributed in four hierarchical levels. These multiplicity orders are in fact lower limits, since these systems lack high-resolution visual observations and additional hierarchical level might exist in that separation range. Conclusions. The six analysed systems have greater multiplicity degree and a more complex hierarchical structure than previously known, which suggests that high-order multiple systems are significantly more frequent that it is currently estimated. The long term spectroscopic monitoring of multiple systems has shown to be useful for the detection of companions in intermediate hierarchical levels.
description: 13 pages, 9 figures. Accepted by Astronomy and Astrophysics
Magnified image of CK302-7229 with calcined bison bone fragment
Creators: name: (:Unkn) Unknown
Publisher: name: University of Wyoming
Year: 2023
Subjects: Bone Fragment
Calcined
Vore Buffalo Jump
Bison
Bison Jump
Mass Kill Site
Archaeological Site
Northwest Plains Tribes
Sinkhole
Wyoming
Prehistoric
Archaeology

description: Bone fragment at 9.6 magnification.
Additional file 6 of Impact of plants on the diversity and activity of methylotrophs in soil
Creators: name: Macey, Michael C.
name: Pratscher, Jennifer
name: Crombie, Andrew T.
name: J. Colin Murrell
Publisher: name: figshare
Year: 2020
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Plant Biology

description: Additional file 5. Phylogeny and relative abundance of xoxF1 sequences retrieved from soil.
HerMES: Point source catalogues from Herschel-SPIRE observations II
Creators: name: Wang, L.
name: Viero, M.
name: Clarke, C.
name: Bock, J.
name: Buat, V.
name: Conley, A.
name: Farrah, D.
name: Heinis, S.
name: Magdis, G.
name: Marchetti, L.
name: Marsden, G.
name: Norberg, P.
name: Oliver, S. J.
name: Roehlly, Y.
name: Roseboom, I. G.
name: Schulz, B.
name: Smith, A. J.
name: Vaccari, M.
name: Zemcov, M.
Publisher: name: arXiv
Year: 2013
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Physical sciences

description: The Herschel Multi-tiered Extragalactic Survey (HerMES) is the largest Guaranteed Time Key Programme on the Herschel Space Observatory. With a wedding cake survey strategy, it consists of nested fields with varying depth and area totalling ~380 deg^2. In this paper, we present deep point source catalogues extracted from Herschel-SPIRE observations of all HerMES fields, except for the later addition of the 270 deg^2 HeLMS field. These catalogues constitute the second Data Release (DR2) made in October 2013. A subset of these catalogues, which consists of bright sources extracted from Herschel-SPIRE observations completed by May 1, 2010 (covering ~ 74 deg^2) were released earlier in the first extensive Data Release (DR1) in March 2012. Two different methods are used to generate the point source catalogues, the SUSSEXtractor (SXT) point source extractor used in two earlier data releases (EDR and EDR2) and a new source detection and photometry method. The latter combines an iterative source detection algorithm, StarFinder (SF), and a De-blended SPIRE Photometry (DESPHOT) algorithm. We use end-to-end Herschel-SPIRE simulations with realistic number counts and clustering properties to characterise basic properties of the point source catalogues, such as the completeness, reliability, photometric and positional accuracy. Over 500, 000 catalogue entries in HerMES fields (except HeLMS) are released to the public through the HeDAM website (http://hedam.oamp.fr/herMES).
description: 14 pages, 7 figures, submitted to MNRAS. Comments welcome
Additional file 8 of Impact of plants on the diversity and activity of methylotrophs in soil
Creators: name: Macey, Michael C.
name: Pratscher, Jennifer
name: Crombie, Andrew T.
name: J. Colin Murrell
Publisher: name: figshare
Year: 2020
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Plant Biology

description: Additional file 7. Phylogeny of a xoxF2 sequence retrieved from soil.
48CK302-408, Side Notched Point, Side 1
Creators: name: (:Unkn) Unknown
Publisher: name: University of Wyoming
Year: 2023
Subjects: Projectile Point
Side Notched
Chert
Vore Buffalo Jump
Bison
Bison Jump
Mass Kill Site
Archaeological Site
Northwest Plains Tribes
Sinkhole
Wyoming
Prehistoric
Archaeology

description: Image of a tan chert side notched projectile point, missing the tip. Provenience: N1-2-3'10"