cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Anisotropic adaptation: metrics and meshes
Creators: name: Pagnutti, Douglas
Publisher: name: University of British Columbia
Year: 2008

description: We present a method for anisotropic mesh refinement to high-order numerical solutions. We accomplish this by assigning metrics to vertices that approximate the error in that region. To choose values for each metric, we first reconstruct an error equation from the leading order terms of the Taylor expansion. Then, we use a Fourier approximation to choose the metric associated with that vertex. After assigning a metric to each vertex, we refine the mesh anisotropically using three mesh operations. The three mesh operations we use are swapping to maximize quality, inserting at approximate circumcenters to decrease cell size, and vertex removal to eliminate small edges. Because there are no guarantees on the results of these modification tools, we use them iteratively to produce a quasi-optimal mesh. We present examples demonstrating that our anisotropic refinement algorithm improves solution accuracy for both second and third order solutions compared with uniform refinement and isotropic refinement. We also analyze the effect of using second derivatives for refining third order solutions.
MOESM3 of The comparative biological effects of spatial management measures in protecting marine biodiversity: a systematic review protocol
Creators: name: Mangano, Maria
name: OâLeary, Bethan
name: Mirto, Simone
name: Mazzola, Antonio
name: SarĂ, Gianluca
Publisher: name: Figshare
Year: 2015
Subjects: subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy
subject: Plant Biology

description: Additional file 3. Data extraction
MOESM5 of Multiple-clone infections of Plasmodium vivax: definition of a panel of markers for molecular epidemiology
Creators: name: Aracele De Souza
name: Araújo, Flávia De
name: Fontes, Cor
name: Carvalho, Luzia
name: Brito, Cristiana De
name: Taís De Sousa
Publisher: name: Figshare
Year: 2015
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 5. Ratio of rare to predominant alleles in the artificial mixtures of plasmid DNA.
Bicellonycha facialis
Creators: name: Pérez-Hernández, Cisteil X.
name: Zaragoza-Caballero, Santiago
name: Romo-Galicia, Alberto
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Lampyridae
Bicellonycha
Bicellonycha facialis

description: Bicellonycha facialis (Gorham, 1881)
MEXICO: VE; Guatemala.
Remarks: This species was incorrectly synonymized with B. amoena by Olivier (1886) and accepted as a synonym by different authors; however, it was recognized as valid by Zaragoza-Caballero (1995).
= Photuris facialis Gorham, 1881
description: Published as part of Pérez-Hernández, Cisteil X., Zaragoza-Caballero, Santiago & Romo-Galicia, Alberto, 2022, Updated checklist of the fireflies (Coleoptera: Lampyridae) of Mexico, pp. 291-317 in Zootaxa 5092 (3) on page 305, DOI: 10.11646/zootaxa.5092.3.3, http://zenodo.org/record/5881269
How do wavelength correlations affect transmission spectra? Application of a new fast and flexible 2D Gaussian process framework to transiting exoplanet spectroscopy
Creators: name: Fortune, Mark
name: Gibson, Neale P.
name: Foreman-Mackey, Daniel
name: Evans-Soma, Thomas M.
name: Maguire, Cathal
name: Ramkumar, Swaetha
Publisher: name: arXiv
Year: 2024
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Physical sciences

description: The use of Gaussian processes (GPs) is a common approach to account for correlated noise in exoplanet time series, particularly for transmission and emission spectroscopy. This analysis has typically been performed for each wavelength channel separately, with the retrieved uncertainties in the transmission spectrum assumed to be independent. However, the presence of noise correlated in wavelength could cause these uncertainties to be correlated, which could significantly affect the results of atmospheric retrievals. We present a method that uses a GP to model noise correlated in both wavelength and time simultaneously for the full spectroscopic dataset while avoiding the use of a 'common-mode' correction. To make this analysis computationally tractable, we introduce a new fast and flexible GP method that can analyse 2D datasets when the input points lie on a (potentially non-uniform) 2D grid - in our case a time by wavelength grid - and the kernel function has a Kronecker product structure. This simultaneously fits all light curves and enables the retrieval of the covariance matrix of the transmission spectrum. By testing on synthetic datasets, we demonstrate that our new approach can reliably recover atmospheric features contaminated by noise correlated in time and wavelength. In contrast, fitting each spectroscopic light curve separately performed poorly when wavelength-correlated noise was present. It frequently underestimated the uncertainty of the scattering slope and overestimated the uncertainty in the strength of sharp absorption peaks in transmission spectra. Two archival VLT/FORS2 transit observations of WASP-31b were re-analysed, with our method strongly constraining the presence of wavelength-correlated noise in both datasets and recovering significantly different constraints on atmospheric features such as the scattering slope and strength of sodium and potassium features.
description: Language revised version accepted for publication in Astronomy & Astrophysics. 35 pages, 18 figures (including appendix)
title: PlanRomePlaque017 17
Creators: name: Galinand, Cyrille
name: Université Paris1 Panthéon-Sorbonne
Publisher: name: Archeovision
Year: 2024
Subjects: subject: Rome antique
subject: Paul Bigot
subject: plan relief

description: Plan de la Rome antique
description: 1 fichier 3D (ply), 113 fichiers image (jpg)
Psolidae Forbes 1841
Creators: name: O'Loughlin, Mark
name: Whitfield, Emily
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Echinodermata
Holothuroidea
Dendrochirotida
Psolidae

description: Psolidae Forbes, 1841
Remarks. For synonymy and systematic records, diagnosis, key to genera and discussion see O’Loughlin & Maric 2008.
description: Published as part of O'Loughlin, Mark & Whitfield, Emily, 2010, New species of Psolus Oken from Antarctica (Echinodermata: Holothuroidea: Psolidae), pp. 61-68 in Zootaxa 2528 on page 62, DOI: 10.5281/zenodo.294189
Additional file 7: Figure S4. of Sjögren’s syndrome-associated microRNAs in CD14+ monocytes unveils targeted TGFβ signaling
Creators: name: Williams, Adrienne
name: Choi, Kevin
name: Chan, Annie
name: Lee, Yun
name: Reeves, Westley
name: Bubb, Michael
name: Stewart, Carol
name: Seunghee Cha
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases
subject: Computational Biology

description: MAP-kinase and JAK-STAT signaling components are predicted targets of SjS-associated miRNAs. Visualization of predicted miRNA targeting of the MAPK (A) and JAK-STAT (B) signaling pathways. Specific mRNA-miRNA interaction results were based on direct evidence obtained from DIANA Tarbase V.6 database (underlined) and from multiple target prediction programs. (PDF 83 kb)
Bicellonycha gorhami Zaragoza-Caballero 1989
Creators: name: Pérez-Hernández, Cisteil X.
name: Zaragoza-Caballero, Santiago
name: Romo-Galicia, Alberto
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Lampyridae
Bicellonycha
Bicellonycha gorhami

description: Bicellonycha gorhami Zaragoza-Caballero, 1989
MEXICO: GR, JC, MO, VE; Guatemala
description: Published as part of Pérez-Hernández, Cisteil X., Zaragoza-Caballero, Santiago & Romo-Galicia, Alberto, 2022, Updated checklist of the fireflies (Coleoptera: Lampyridae) of Mexico, pp. 291-317 in Zootaxa 5092 (3) on page 305, DOI: 10.11646/zootaxa.5092.3.3, http://zenodo.org/record/5881269
Additional file 6: Figure S3. of Sjögren’s syndrome-associated microRNAs in CD14+ monocytes unveils targeted TGFβ signaling
Creators: name: Williams, Adrienne
name: Choi, Kevin
name: Chan, Annie
name: Lee, Yun
name: Reeves, Westley
name: Bubb, Michael
name: Stewart, Carol
name: Seunghee Cha
Publisher: name: Figshare
Year: 2016
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: SjS-associated miRNA expression levels are positively associated in CD14+ monocytes. Linear regression analyses were used to define associations between miRNAs in HC (circle, n = 17), SLE (triangle, n = 17), and RA (diamond, n = 18) patient groups. Cutoff values established by ROC curve analyses are indicated by dotted lines. P
Psolus Oken 1815
Creators: name: O'Loughlin, Mark
name: Whitfield, Emily
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Echinodermata
Holothuroidea
Dendrochirotida
Psolidae
Psolus

description: Psolus Oken, 1815
Diagnosis. Species of Psolidae with large imbricating or contiguous dorsal and lateral scales; ventro-lateral scales at margin clearly demarcated from thin sole that lacks conspicuous scales; tube feet absent dorsally and laterally, except sometimes present orally and anally.
Remarks. In their key to genera of Psolidae, O’Loughlin & Maric 2008 stated that the conspicuous dorsal and lateral scales of species of Psolus lacked calcareous towers. A close dorsal and lateral cover of apically spinous towers on the scales is the diagnostically distinctive character of one of the new species described below. The diagnosis in O’Loughlin & Maric 2008 has been appropriately emended here.
description: Published as part of O'Loughlin, Mark & Whitfield, Emily, 2010, New species of Psolus Oken from Antarctica (Echinodermata: Holothuroidea: Psolidae), pp. 61-68 in Zootaxa 2528 on page 62, DOI: 10.5281/zenodo.294189
Bicellonycha limbata Pic 1924
Creators: name: Pérez-Hernández, Cisteil X.
name: Zaragoza-Caballero, Santiago
name: Romo-Galicia, Alberto
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Lampyridae
Bicellonycha
Bicellonycha limbata

description: Bicellonycha limbata Pic, 1924
MEXICO: CS, JC, MO, OA, PU, VE; Costa Rica
description: Published as part of Pérez-Hernández, Cisteil X., Zaragoza-Caballero, Santiago & Romo-Galicia, Alberto, 2022, Updated checklist of the fireflies (Coleoptera: Lampyridae) of Mexico, pp. 291-317 in Zootaxa 5092 (3) on page 305, DOI: 10.11646/zootaxa.5092.3.3, http://zenodo.org/record/5881269
MOESM2 of Multiple-clone infections of Plasmodium vivax: definition of a panel of markers for molecular epidemiology
Creators: name: Aracele De Souza
name: Araújo, Flávia De
name: Fontes, Cor
name: Carvalho, Luzia
name: Brito, Cristiana De
name: Taís De Sousa
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Ecology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 2. Expected and observed ratio of alleles amplified from 11 artificial mixtures of plasmid DNA. The relative abundance of alleles was estimated as the ratio between the heights of the peaks (measured in arbitrary fluorescence units).
Additional file 1: of Outcomes measures in a decade of dementia and mild cognitive impairment trials
Creators: name: Harrison, Jennifer
name: Noel-Storr, Anna
name: Demeyere, Nele
name: Reynish, Emma
name: Quinn, Terry
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Medicine
subject: Neuroscience
subject: Pharmacology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Computational Biology

description: Full list of outcome measures reported. Tables including all outcome measures reported in each of the categories: cognitive, functional/ADL, quality of life, mood, behaviour and global. (DOCX 37 kb)
Bicellonycha lucidicollis
Creators: name: Pérez-Hernández, Cisteil X.
name: Zaragoza-Caballero, Santiago
name: Romo-Galicia, Alberto
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Lampyridae
Bicellonycha
Bicellonycha lucidicollis

description: Bicellonycha lucidicollis (Gorham, 1880)
MEXICO: CS; Costa Rica; Guatemala; Panama
= Photuris lucidicollis Gorham, 1880
description: Published as part of Pérez-Hernández, Cisteil X., Zaragoza-Caballero, Santiago & Romo-Galicia, Alberto, 2022, Updated checklist of the fireflies (Coleoptera: Lampyridae) of Mexico, pp. 291-317 in Zootaxa 5092 (3) on page 305, DOI: 10.11646/zootaxa.5092.3.3, http://zenodo.org/record/5881269
Atmospheric entry and fragmentation of small asteroid 2024 BX1: Bolide trajectory, orbit, dynamics, light curve, and spectrum
Creators: name: Spurny, P.
name: Borovicka, J.
name: Shrbeny, L.
name: Hankey, M.
name: Neubert, R.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: Asteroid 2024 BX1 was the eighth asteroid that was discovered shortly before colliding with the Earth. The associated bolide was recorded by dedicated instruments of the European Fireball Network and the AllSky7 network on 2024 January 21 at 0:32:38-44 UT. We report a comprehensive analysis of this instrumentally observed meteorite fall, which occurred as predicted west of Berlin, Germany. The atmospheric trajectory was quite steep, with an average slope to the Earth's surface of 75.6 deg. The entry speed was 15.20 km/s. The heliocentric orbit calculated from the bolide data agrees very well with the asteroid data. However, the bolide was fainter than expected for a reportedly meter-sized asteroid. The absolute magnitude reached -14.4, and the entry mass was estimated to be 140 kg. The recorded bolide spectrum was low in iron, based on which, the meteorite was expected to be rich in enstatite. The recovered meteorites, called Ribbeck, were classified as aubrites. The high albedo of enstatite (E-type) asteroids can explain the size discrepancy. The asteroid was likely smaller than 0.5 meter and should rather be called a meteoroid. During the atmospheric entry, the meteoroid severely fragmented into much smaller pieces already at a height of 55 km under an aerodynamic pressure of 0.12 MPa. The primary fragments then broke up again, most frequently at heights 39-29 km (0.9-2.2 MPa). Numerous small meteorites and up to four stones larger than 100g were expected to land. Within a few days of publication of the location of the strewn field, dozens of meteorites were found in the area we had predicted.
description: Accepted in A&A March 1, 2024
Additional file 1: of Economic evaluation of the breast cancer screening programme in the Basque Country: retrospective cost-effectiveness and budget impact analysis
Creators: name: Arrospide, Arantzazu
name: Rue, Montserrat
name: Ravesteyn, Nicolien Van
name: Merce Comas
name: Soto-Gordoa, Myriam
name: GarbiĂąe Sarriugarte
name: Mar, Javier
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: Plant Biology

description: Model description. This file includes 465 the detailed description of the simulation model built for 4667 this study. (PDF 429 kb)
Tempered radicals and porous boundaries: the challenges and complexities of anti-harassment work in Canadian universities
Creators: name: Westerman, Marni
Publisher: name: University of British Columbia
Year: 2008

description: Based on research involving an overview of 44 policies at Canadian universities and 21 interviews with anti-harassment practitioners across the country, this thesis explores the challenges faced by anti-harassment practitioners working with legally defined institutional harassment discrimination policies. Anti-harassment work at Canadian universities is complex because practitioners must negotiate institutional demands set out in policy as well as politicized demands from members of marginalized groups both inside and outside the institution. Interviews with practitioners reveal that their daily work in reactive investigation and mediation of complaints as well as their proactive work in educating campus communities may support the less powerful parties to complaints, rather than focusing only on limiting the institution’s legal liability. Therefore, although anti-harassment practitioners occupy a boundary role as defined by Fraser (1989), their work is not entirely “depoliticizing”. Practitioners’ identities, sense of marginalization, and commitment to activist politics contribute to their position as tempered radicals as defined by Meyerson and Scully (1995), helping to explain their commitment to both institutional prerogatives and to empowering marginalized members of the institution. The advent of neoliberalism has set the stage for the shift of discourses and practices away from those which value equity to those that underscore traditional divisions of power and challenge the demands of so-called “special interest groups’. This shift is underscored by concerns about “political correctness” that arise within institutional communities and the broader social context. Perhaps the most obvious of the changes relates to the shift from a focus on equity and human rights to what is termed the “respectful workplace model”. The inclusion of personal harassment issues in human rights policies shifts the focus of the policies to issues that are not tied to historical oppressions and can potentially deflect attention from the human rights component of these policies. The challenge is to move beyond a legalistic perspective regarding policy development and to consider changes in the broader social context that influence policy change and the work of anti-harassment practitioners.
MOESM6 of Multiple-clone infections of Plasmodium vivax: definition of a panel of markers for molecular epidemiology
Creators: name: Aracele De Souza
name: Araújo, Flávia De
name: Fontes, Cor
name: Carvalho, Luzia
name: Brito, Cristiana De
name: Taís De Sousa
Publisher: name: Figshare
Year: 2015
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Additional file 6. Summary of previous studies reporting the genetic diversity and multiplicity of infection of Plasmodium vivax.
Examining the detectability of ringing on highly eccentric exoplanets
Creators: name: Vanrespaille, Mathijs
name: Baeyens, Robin
name: Schneider, Aaron David
name: Carone, Ludmila
name: Decin, Leen
Publisher: name: arXiv
Year: 2024
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: Eccentric exoplanets offer an opportunity to study the response of an atmosphere to changing thermal forcing and the robustness of the super-rotating equatorial jet seen on tidally locked hot Jupiters. However, the atmospheric dynamics on eccentric planets strongly depend on the planetary rotation period, which is difficult to constrain observationally. The ringing phenomenon, whereby the observed emission increases and decreases after the periastron passage as the flash-heated hemisphere rotates into and out of view, can provide a tight constraint on rotation. We studied five highly eccentric transiting exoplanets HAT-P-2 b, HD 80606 b, TOI-3362 b, TOI-4127 b and HD 17156 b to find which displays strong ringing signals that are sufficiently strong for the James Webb Space Telescope (JWST) to detect. We implemented the treatment of eccentricity and non-synchronous rotation in the non-grey climate model expeRT/MITgcm and generated synthetic light curves. We find four detectable ringing peaks on HD 80606 b and some undetectable ringing on TOI-4127 b and HD 17156 b. The lack of clouds, photo-chemistry and obliquity in our models may have led us to overestimate the amplitude of the ringing however. The strength of the ringing signal is mostly determined by the eccentricity, planetary rotation period, planet-to-star radius ratio and apparent magnitude of the system. We searched for more exoplanets that could show ringing but found no candidates as promising as HD 80606 b. We recommend prioritising HD 80606 b as a target for ringing with JWST. A baseline of five days after the periastron passage would capture three ringing peaks, which is sufficient to tightly constrain the planetary rotation period. An extension to seven days would add a fourth peak, which would allow us to verify the rotation period.
description: 11 pages, 8 figures
Bicellonycha mexicana
Creators: name: Pérez-Hernández, Cisteil X.
name: Zaragoza-Caballero, Santiago
name: Romo-Galicia, Alberto
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Lampyridae
Bicellonycha
Bicellonycha mexicana

description: Bicellonycha mexicana (Gorham, 1880)
MEXICO: MO, PU, VE Endemic
= Photuris mexicana Gorham, 1880
description: Published as part of Pérez-Hernández, Cisteil X., Zaragoza-Caballero, Santiago & Romo-Galicia, Alberto, 2022, Updated checklist of the fireflies (Coleoptera: Lampyridae) of Mexico, pp. 291-317 in Zootaxa 5092 (3) on page 305, DOI: 10.11646/zootaxa.5092.3.3, http://zenodo.org/record/5881269
Bicellonycha oliveri Zaragoza-Caballero 1989
Creators: name: Pérez-Hernández, Cisteil X.
name: Zaragoza-Caballero, Santiago
name: Romo-Galicia, Alberto
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Lampyridae
Bicellonycha
Bicellonycha oliveri

description: Bicellonycha oliveri Zaragoza-Caballero, 1989
MEXICO: HG Endemic
description: Published as part of Pérez-Hernández, Cisteil X., Zaragoza-Caballero, Santiago & Romo-Galicia, Alberto, 2022, Updated checklist of the fireflies (Coleoptera: Lampyridae) of Mexico, pp. 291-317 in Zootaxa 5092 (3) on page 305, DOI: 10.11646/zootaxa.5092.3.3, http://zenodo.org/record/5881269
Psolus carolineae O'Loughlin & Whitfield, 2010, sp. nov.
Creators: name: O'Loughlin, Mark
name: Whitfield, Emily
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Echinodermata
Holothuroidea
Dendrochirotida
Psolidae
Psolus
Psolus carolineae

description: Psolus carolineae sp. nov.
Figures 2 a–f, 3a–d.
Material examined. Holotype. Antarctica, Scotia Sea, South Georgia, 55.06ºS 35.24ºW, 116 m, ICEFISH 2004 stn 47–BT–25, S. Lockhart, 12 Jun 2004, NMV F168623.
Paratypes. From type series (type locality on same date), NMV F104996 (5); Shag Rocks, 53.63ºS 40.91ºW, 206 m, BAS 2006 stn SR–EBS–4, NMV F168627 (1).
Other material. Antarctic Peninsula, N of Bransfield Strait, 227–231 m, US AMLR 2006 stn 33–18, USNM 1132590 (2); N of D’Urville I., 238 m, US AMLR 2006 stn 39–52, USNM 1132592 (1); N of D’Urville I., 238 m, US AMLR 2006 stn 39–52, USNM 1132593 (8).
Diagnosis. Psolus species up to 22 mm long, 9 mm high, 11 mm wide; high to low convex body, slightly tapered posteriorly, lacking oral and anal cones; scales obscured by close cover of large and small apically spinous pillars on the scales, up to 0.5 mm high; lacking 5 discrete oral valves, oral scales numerous, apically pointed, marginally spinous; tentacles 10, 8 large, 2 small ventrally; calcareous ring with distally rounded radial and interradial anterior projections, radial projections larger, concave radial and interradial posterior indentations; thin calcareous sole, single outer peripheral series of small tube feet, zig-zag to double series of larger inner peripheral tube feet, lacking mid-ventral tube feet; bi-lobed dorsal madreporite; single ventral polian vesicle; gonad tubules unbranched.
Dorsal and lateral multilayered ossicles only. Sole with irregular round to oval perforated plates and shallow bowls, commonly 136 µ m long, frequently with upturned margin, surface and marginal knobs. Largest tentacle ossicles irregularly oval or triangular or elongate thick perforated plates, surface smooth, bluntly denticulate margin, up to 560 µ m long. Largest tube feet support ossicles up to 320 µ m long, elongate curved narrow perforated plates, bluntly denticulate margin, rare sparse surface knobs.
Colour (preserved). White to off-white, slightly translucent sole.
Distribution. Antarctic Ocean, South Georgia, Shag Rocks, Antarctic Peninsula, 116– 238 m.
Etymology. Named for Caroline Harding (Museum Victoria Entomology Department), with appreciation of her generous collaborative assistance in doing both the montage photography of specimens and ossicles in this study, and the preparation of the figures.
Remarks. Psolus carolineae sp. nov. is distinguished from all other Antarctic Psolus species by the distinctive apically spinous pillars that arise from and closely cover the dorsal and lateral scales.
description: Published as part of O'Loughlin, Mark & Whitfield, Emily, 2010, New species of Psolus Oken from Antarctica (Echinodermata: Holothuroidea: Psolidae), pp. 61-68 in Zootaxa 2528 on pages 64-66, DOI: 10.5281/zenodo.294189
Additional file 1: of Differentiation of Mycobacterium tuberculosis complex from non-tubercular mycobacteria by nested multiplex PCR targeting IS6110, MTP40 and 32kD alpha antigen encoding gene fragments
Creators: name: Sinha, Pallavi
name: Gupta, Anamika
name: Pradyot Prakash
name: Shampa Anupurba
name: Rajneesh Tripathi
name: G. Srivastava
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Comparison of conventional procedures with single-step & nested multiplex PCR for detection of M. tuberculosis complex in different groups of patients. (DOCX 15 kb)
MOESM1 of Comparative analysis of taxonomic, functional, and metabolic patterns of microbiomes from 14 full-scale biogas reactors by metagenomic sequencing and radioisotopic analysis
Creators: name: Luo, Gang
name: Fotidis, Ioannis
name: Angelidaki, Irini
Publisher: name: Figshare
Year: 2016
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Additional file 1. Table S1 Summary of the metagenomic sequencing data; Table S2 Taxonomic classification of the bacterial sequences (Only relative abundances of identified Class and Genus higher than 1Â % were listed); Table S3 Relative abundance of each gene involved in methanogenesis pathways from metagenomic datasets of the 14 samples; Table S4 Individual VFAs in each sample; Figure S1 Relative abundances of major categories of functional genes in the shotgun metagenomes obtained from the 14 samples; Figure S2 Genes involved in carbohydrate and protein pathways from metagenomic datasets of the 14 samples; Figure S3 The ratio of 14CO2/14CH4 of the 14 samples; Figure S4 Correlation between the ratio of 14CO2/14CH4 and percentage of Methanosarcinales; Figure S5 Procrustes analyses of taxonomic and functional patterns.
Bicellonycha ornaticollis
Creators: name: Pérez-Hernández, Cisteil X.
name: Zaragoza-Caballero, Santiago
name: Romo-Galicia, Alberto
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Lampyridae
Bicellonycha
Bicellonycha ornaticollis

description: Bicellonycha ornaticollis (Blanchard, 1846)
MEXICO: CS, GR; Colombia; Ecuador
= Lampyris ornaticollis Blanchard, 1846
description: Published as part of Pérez-Hernández, Cisteil X., Zaragoza-Caballero, Santiago & Romo-Galicia, Alberto, 2022, Updated checklist of the fireflies (Coleoptera: Lampyridae) of Mexico, pp. 291-317 in Zootaxa 5092 (3) on page 305, DOI: 10.11646/zootaxa.5092.3.3, http://zenodo.org/record/5881269
MOESM1 of Changes in cardiac arrest patients’ temperature management after the 2013 “TTM” trial: results from an international survey
Creators: name: Deye, Nicolas
name: Vincent, François
name: Michel, Philippe
name: Ehrmann, Stephan
name: Silva, Daniel
name: Piagnerelli, Michael
name: Kimmoun, Antoine
name: Olfa Hamzaoui
name: Lacherade, Jean-Claude
name: Jonghe, Bernard
name: Brouard, Florence
name: Audoin, Corinne
name: Monnet, Xavier
name: Pierre-François Laterre
Publisher: name: Figshare
Year: 2016
Subjects: subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy

description: Additional file 1. French questionnaire.
Population genetic structure of North American broad whitefish, Coregonus nasus (Pallas), with emphasis on the Mackenzie River system
Creators: name: Harris, Les N.
Publisher: name: University of British Columbia
Year: 2008

description: Broad whitefish, Coregonus nasus, is an important subsistence fish species in Arctic North America, yet virtually nothing is known regarding the genetic population structure of Nearctic populations of this species. In this thesis, microsatellite DNA variation was assayed among 1213 broad whitefish from 47 localities throughout North America, with emphasis on the Mackenzie River system, Northwest Territories. Specifically, I examined geographic variation in allele frequencies to assess how historical factors (Pleistocene glaciations) have shaped the current structuring of genetic variability and population differentiation. Microsatellite data was also used to resolve the relative contributions of broad whitefish populations to subsistence fisheries in the Mackenzie River system. Overall, broad whitefish exhibit relatively high intrapopulation microsatellite variation (average 12.29 alleles/locus, average HE = 0.58) and there were declines in these measures of genetic diversity with distance from putative refugia suggesting historical factors, namely post-glacial dispersal, have influenced current microsatellite variation. Interpopulation divergence was low (overall FST = 0.07), but the main regions assayed in this study (Russia, Alaska, Mackenzie River and Travaillant Lake systems) are genetically differentiated. Strong isolation-by-distance among samples was resolved when including only those populations occupying former Beringia, but not when assaying those at the periphery of the range in the Mackenzie River system, suggesting that broad whitefish in the Mackenzie system have not occupied the region long enough since their invasion post-glacially to have approached equilibrium between gene flow and drift. Mixture analysis indicated that most fish from the lower Mackenzie River subsistence fishery originated from the Peel River, highlighting the importance of this tributary. Additionally the mixture analysis provides evidence for a putative riverine life history form in the Mackenzie River. My results indicate that glaciation and post-glacial colonization have been important in shaping the current genetic population structure of North American broad whitefish. They also illustrate the utility of microsatellite DNA to delineate population structure and patterns of genetic diversity in recently founded populations in addition to resolving contributions to fisheries. My data also support the hypothesis that there are several designatable units of conservation among broad whitefish populations and that management strategies should be implemented accordingly.
Bicellonycha ruficollis
Creators: name: Pérez-Hernández, Cisteil X.
name: Zaragoza-Caballero, Santiago
name: Romo-Galicia, Alberto
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Lampyridae
Bicellonycha
Bicellonycha ruficollis

description: Bicellonycha ruficollis (Gorham, 1880)
MEXICO: HG, MO, VE; Central America
= Photuris ruficollis Gorham, 1880
description: Published as part of Pérez-Hernández, Cisteil X., Zaragoza-Caballero, Santiago & Romo-Galicia, Alberto, 2022, Updated checklist of the fireflies (Coleoptera: Lampyridae) of Mexico, pp. 291-317 in Zootaxa 5092 (3) on page 305, DOI: 10.11646/zootaxa.5092.3.3, http://zenodo.org/record/5881269
Additional file 1: of A randomised trial assessing the acceptability and effectiveness of providing generic versus tailored feedback about health risks for a high need primary care sample
Creators: name: Noble, Natasha
name: Paul, Christine
name: Carey, Mariko
name: Blunden, Stephen
name: Turner, Nicole
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer

description: CONSORT 2010 checklist for randomised trials.
title: A Multi-disciplinary Mosaic: Reflections on International Security and Global Cooperation
title: A Multi-disciplinary Mosaic: Reflections on International Security and Global Cooperation
Creators: name: Böckenförde, Markus
Publisher: name: GCR21- Käte Hamburger Kolleg/Center for Global Cooperation Research
Year: 2014
Subjects: subject: 10505 International Relations, International Politics, Foreign Affairs, Development Policy
subject: 10500 Political Science
subject: 10212 Rural Sociology
subject: F59 International Relations and International Political Economy: Other
subject: F55 International Institutional Arrangements
subject: H77 Intergovernmental Relations; Federalism; Secession
subject: KAT12 International Institutions, Relations, Conditions
subject: KAT20 Legal system, Legislation, Law

description:

With contributions by Siddharth Mallavarapu, Lothar Brock, Bernd Lahno, Noemi Gal-Or, Sarah van Beurden, Morgan Brigg, Jan Aart Scholte, Steven Pierce, Abou Jeng, Peter Thiery, Hung-jen Wang, Herbert Wulf, Dong Wang, Jaroslava Gajdošová, Birgit Schwelling, Stephen Brown, Mario Schmidt, Isaline Bergamaschi, Christian Meyer, Mathieu Rousselin, Margret Thalwitz, Gianluca Grimalda, Jessica Schmidt, Marlies Ahlert, and David Chandler.

‘International security’ is a catch-all phrase behind which lie hidden some very disparate assumptions and expectations. One thing on which all may perhaps agree, however, is that such security is only achievable in concert, through global collaboration. Opinions as to which measures of global rapprochement should be given priority vary according to the region and set of assumptions involved. This issue of ‘Global Dialogues’ brings together the reflections of a group of twenty-five scholars on the theme of international security and cooperation.

description: Global Dialogues
Oedichirus longipennis Kraatz 1859
Creators: name: Assing, Volker
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Staphylinidae
Oedichirus
Oedichirus longipennis

description: Oedichirus longipennis KRAATZ, 1859
M a t e r i a l e x a m i n e d: Thailand: 1♂, Lamphun, Ban Lam Chan, Tambon, Phla Tu Pa, light trap, 23.X.2016, leg. Rossi (cAss).
C o m m e n t: The vast distribution of this species ranges from the West Himalaya to South India, Sri Lanka, Java, Sulawesi, and South Japan (ROUGEMONT 2018b).
Oedichirus coorgensis ROUGEMONT, 2018 M a t e r i a l e x a m i n e d: India:1♂, 1♀, Goa, Canacoa distr., Cortigao Sanctuary, 100 m,
primary forest, 6-10.I.1997, leg. Schulz & Vock (cAss).
C o m m e n t: The original description of this recently described species is based on a unique male from Karnataka state, South India (ROUGEMONT 2018b).
description: Published as part of Assing, Volker, 2019, Three new species and additional records of Oedichirus (Coleoptera, Staphylinidae, Paederinae), pp. 33-42 in Linzer biologische Beiträge 51 (1) on pages 34-35, DOI: 10.5281/zenodo.3763597
Bicellonycha stigmatica
Creators: name: Pérez-Hernández, Cisteil X.
name: Zaragoza-Caballero, Santiago
name: Romo-Galicia, Alberto
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Lampyridae
Bicellonycha
Bicellonycha stigmatica

description: Bicellonycha stigmatica (Olivier, 1886)
MEXICO: CS, OA, PU, VE; Guatemala
= Photuris stigmatica Olivier, 1886
description: Published as part of Pérez-Hernández, Cisteil X., Zaragoza-Caballero, Santiago & Romo-Galicia, Alberto, 2022, Updated checklist of the fireflies (Coleoptera: Lampyridae) of Mexico, pp. 291-317 in Zootaxa 5092 (3) on page 305, DOI: 10.11646/zootaxa.5092.3.3, http://zenodo.org/record/5881269
Motor preparation and the auditory startle response
Creators: name: Carlsen, Anthony Nigel
Publisher: name: University of British Columbia
Year: 2008

description: Studies investigating human information processing have provided evidence that in some cases, movements can be prepared in advance. Although evidence for motor preparation has been shown at cortical and spinal levels, motor preparation at a subcortical level is not well described. One line of inquiry has involved the use of a startling acoustic stimulus (115-124 dB) that can act as an early trigger for pre-programmed actions in reaction time (RT) tasks. In light of this new research paradigm, the startle reflex may be used as a tool to investigate motor preparation. Here, six experiments were conducted that work towards the goals of understanding the mechanism of RT shortening due to startle, and motor preparation at a subcortical level. The first section (2 experiments) of this dissertation provides evidence that when a motor action can be prepared in advance, it is pre-programmed and stored subcortically awaiting the normal cortical “go” signal. A startle appears to activate structures directly that are involved with the voluntary response channel leading to early triggering of the pre-programmed response, and dramatically reduced RT. In the current dissertation we investigated alternative mechanisms to explain startle RT facilitation, including the stimulus intensity effect, and a fast transcortical route, with results supporting the original subcortical storage hypothesis. The second section (4 experiments) presents data which together provide insight into motor programming processes, and the circumstances under which a response is pre-programmed. For example, when the possibility of not having to make the response existed, a known response was not pre-programmed. Similarly, no pre-programming occurred when certainty existed regarding when to respond. However, while a previous experiment showed that having to make a choice between several response alternatives precluded pre-programming, this dissertation shows that if possible response alternatives are not in conflict with one another, multiple responses can be prepared in parallel. Finally, the complexity of a response such as one involving multiple sequenced sub-components may limit the ability to pre-program in a simple RT task. Taken together, these results suggest that pre-programming is dependent on the task characteristics and appears to involve implementation of strategies to increase programming efficiency.
MOESM2 of Changes in cardiac arrest patients’ temperature management after the 2013 “TTM” trial: results from an international survey
Creators: name: Deye, Nicolas
name: Vincent, François
name: Michel, Philippe
name: Ehrmann, Stephan
name: Silva, Daniel
name: Piagnerelli, Michael
name: Kimmoun, Antoine
name: Olfa Hamzaoui
name: Lacherade, Jean-Claude
name: Jonghe, Bernard
name: Brouard, Florence
name: Audoin, Corinne
name: Monnet, Xavier
name: Pierre-François Laterre
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences

description: Additional file 2. Additional Figures S1–S9 and Tables S1–S2.
Additional file 2: of Surveillance for Eurasian-origin and intercontinental reassortant highly pathogenic influenza A viruses in Alaska, spring and summer 2015
Creators: name: Ramey, Andrew
name: Pearce, John
name: Reeves, Andrew
name: Poulson, Rebecca
name: Dobson, Jennifer
name: Lefferts, Brian
name: Spragens, Kyle
name: Stallknecht, David
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Maximum likelihood phylogenies depicting inferred relationship among nucleotide sequences for the PB2 (Figure S1), PB1 (Figure S2), PA (Figure S3), NP (Figure S4), M (Figure S5), and NS (Figure S6) gene segments of influenza A isolates derived from wild geese sampled on the Yukon-Kuskokwim Delta, Alaska during spring 2015 (bold) and others representing continental lineages of influenza A viruses recently detected in North America and Eurasia. Bootstrap support values > 70 for nodes are shown. (PDF 230 kb)
Additional file 2: of A randomised trial assessing the acceptability and effectiveness of providing generic versus tailored feedback about health risks for a high need primary care sample
Creators: name: Noble, Natasha
name: Paul, Christine
name: Carey, Mariko
name: Blunden, Stephen
name: Turner, Nicole
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer

description: Health risk survey (text version).
Photuris Dejean 1833
Creators: name: Pérez-Hernández, Cisteil X.
name: Zaragoza-Caballero, Santiago
name: Romo-Galicia, Alberto
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Lampyridae
Photuris

description: Genus Photuris Dejean, 1833
NAR: TM; MTZ: SO, TV, SS, CS; NTR: BB, VE, YU
= Telephoroides Motschulsky, 1853
description: Published as part of Pérez-Hernández, Cisteil X., Zaragoza-Caballero, Santiago & Romo-Galicia, Alberto, 2022, Updated checklist of the fireflies (Coleoptera: Lampyridae) of Mexico, pp. 291-317 in Zootaxa 5092 (3) on page 305, DOI: 10.11646/zootaxa.5092.3.3, http://zenodo.org/record/5881269
Additional file 1: of Prevalence of class 1 and 2 integrons in multi-drug resistant Escherichia coli isolated from aquaculture water in Chaharmahal Va Bakhtiari province, Iran
Creators: name: Elahe Tajbakhsh
name: Faham Khamesipour
name: Ranjbar, Reza
name: Ifeoma Ugwu
Publisher: name: Figshare
Year: 2015
Subjects: subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Table S1. Primers used for the PCR to detect integrons.
Early interaction between pseudomonas aeruginosa and polarized human bronchial epithelial cells
Creators: name: Lo, Andy
Publisher: name: University of British Columbia
Year: 2008

description: Pseudomonas is the most common cause of chronic lung infections leading to death in cystic fibrosis patients. While chronic infection is extremely difficult to eradicate, the initial bacterial-host interactions prior to biofilm formation and establishment of chronic infections represents an attractive therapeutic target. It is clear that interaction between pathogens and the host is a very complex process and successful adaptation requires tight control of virulence factor expression. The aim of this project was to look for early changes in P. aeruginosa global gene expression in response to attachment to epithelial cells. P. aeruginosa PA01 was incubated with polarized HBE cells at a MOI of 100 for 4 hours and bacteria attached to epithelial cells (interacting) were collected separately from those in the supernatant (non-interacting). To minimize media effects observed by others, iron and phosphate were supplemented at appropriate levels to avoid expression changes due to limitation of these nutrients, as confirmed in our microarray experiments. Analysis of 3 independent experiments demonstrated that 766 genes were up or down regulated by more than 1.5 fold during attachment. Among these, 371 genes, including ion, oprC, as well as 3 genes in quorum-sensing systems and 9 genes involved in the pmrAB and phoPQ two-component regulatory systems were found to be induced in the interacting bacteria. On the other hand, 395 genes, including oprG outer membrane porin and pscP involved in type III secretion system were down regulated. To understand the roles of these differentially expressed genes, a cytotoxicity (LDH release) assay was performed and demonstrated that oprG and ion mutants were less capable than the wild type of killing HBE epithelial cells. These findings suggest that, under these interaction assay conditions, regulation of the expression of certain virulence factors provides a potential advantage for successful adaptation. In addition, a mutant lacking a filamentous hemagglutinin like protein was found to be less cytotoxic to HBE cells and also deficient in A549 epithelial cell binding, indicating that this probable non-pilin adhesin has multiple functions in P. aeruginosa.
Additional file 1: of Insecticide resistance in phlebotomine sandflies in Southeast Asia with emphasis on the Indian subcontinent
Creators: name: Dhiman, Ramesh
name: Rajpal Yadav
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Multilingual abstracts in the five official working languages of the United Nations. (PDF 461Â kb)