cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1: of Modelling local gene networks increases power to detect trans-acting genetic effects on gene expression
Creators: name: Rakitsch, Barbara
name: Stegle, Oliver
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Supplementary methods and supplementary figures. (PDF 5596 kb)
Additional file 1: of Clinicopathological and prognostic significance of mTOR and phosphorylated mTOR expression in patients with esophageal squamous cell carcinoma: a systematic review and meta-analysis
Creators: name: Shuangjiang Li
name: Zhiqiang Wang
name: Huang, Jian
name: Cheng, Shan
name: Du, Heng
name: Guowei Che
name: Peng, Yong
Publisher: name: Figshare
Year: 2016
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Marine Biology
subject: Cancer

description: Summary of electronic literature retrieval. (DOCX 14Â kb)
The Origins of Untouchability: An Analytical Study of Dr. B.R. Ambedkar's Perspective
Creators: name: Avish P.
name: Pritam R.
Publisher: name: gjrpublication
Year: 2024

description: Dr. B.R. Ambedkar, in his groundbreaking work The Untouchables: Who Were They and Why They Became Untouchables? (1948), explores the origins of untouchability, a phenomenon deeply rooted in India’s social structure. Ambedkar challenges racial theories and Brahmanical narratives that have long dominated discourse, instead attributing untouchability to social practices, religious monopolization, and cultural taboos. This paper critically examines Ambedkar’s rejection of racial determinism, his analysis of Aryans, Dasas, Nagas, and Dravidians, and his reliance on anthropological evidence to trace untouchability's origins.
Additional file 2: of Clinicopathological and prognostic significance of mTOR and phosphorylated mTOR expression in patients with esophageal squamous cell carcinoma: a systematic review and meta-analysis
Creators: name: Shuangjiang Li
name: Zhiqiang Wang
name: Huang, Jian
name: Cheng, Shan
name: Du, Heng
name: Guowei Che
name: Peng, Yong
Publisher: name: Figshare
Year: 2016
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: Science Policy

description: Quality assessments of included studies. (DOCX 14Â kb)
Additional file 1: of Maternal urinary manganese and risk of low birth weight: a caseâ  control study
Creators: name: Xia, Wei
name: Yanqiu Zhou
name: Tongzhang Zheng
name: Zhang, Bin
name: Bassig, Bryan
name: Yuanyuan Li
name: Wise, John
name: Aifen Zhou
name: Yanjian Wan
name: Youjie Wang
name: Xiong, Chao
name: Jinzhu Zhao
name: Zhengkuan Li
name: Yuanxiang Yao
name: Hu, Jie
name: Xinyun Pan
name: Shunqing Xu
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy

description: Distribution of maternal urianry manganese and restricted spline curves association between urinary manganese concentration and risk of low birth weigh in the stratified analysis. (DOCX 104 kb)
Additional file 2: of Assessment and model guided cancer screening promotion by village doctors in China: a randomized controlled trial protocol
Creators: name: Feng, Rui
name: Xingrong Shen
name: Chai, Jing
name: Penglai Chen
name: Cheng, Jing
name: Liang, Han
name: Zhao, Ting
name: Sha, Rui
name: Kaichun Li
name: Debin Wang
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: Science Policy

description: Questions for soliciting evaluation data and calculation of outcome measures. (DOCX 26 kb)
Additional file 2: Table S1. of Expression and clinical significance of annexin A2 and human epididymis protein 4 in endometrial carcinoma
Creators: name: Deng, Lu
name: Yiping Gao
name: Li, Xiao
name: Mingbo Cai
name: Huimin Wang
name: Huiyu Zhuang
name: Mingzi Tan
name: Shuice Liu
name: Yingying Hao
name: Lin, Bei
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Computational Biology

description: The correlation between ANXA2/HE4 and clinical outcomes of endometrial carcinoma. (DOC 37Â kb)
Additional file 1: of Assessment and model guided cancer screening promotion by village doctors in China: a randomized controlled trial protocol
Creators: name: Feng, Rui
name: Xingrong Shen
name: Chai, Jing
name: Penglai Chen
name: Cheng, Jing
name: Liang, Han
name: Zhao, Ting
name: Sha, Rui
name: Kaichun Li
name: Debin Wang
Publisher: name: Figshare
Year: 2015
Subjects: subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Project subject sampling and randomization. (DOCX 80 kb)
Additional file 2: of Tripartite motif containing 62 is a novel prognostic marker and suppresses tumor metastasis via c-Jun/Slug signaling-mediated epithelial-mesenchymal transition in cervical cancer
Creators: name: Liu, Tian-Yu
name: Chen, Jian
name: Shang, Chun-Liang
name: Shen, Hong-Wei
name: Huang, Jia-Ming
name: Liang, Yan-Chun
name: Wang, Wei
name: Zhao, Yun-He
name: Liu, Duo
name: Shu, Man
name: Guo, Lu-Yan
name: Hu, Zheng
name: Yao, Shu-Zhong
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology
subject: Computational Biology

description: Supplementary tables of this study. (DOCX 39Â kb)
Additional file 7: of Optimization and evaluation of Luminex performance with supernatants of antigen-stimulated peripheral blood mononuclear cells
Creators: name: Surenaud, Mathieu
name: Manier, Céline
name: Richert, Laura
name: Thiébaut, Rodolphe
name: Levy, Yves
name: Hue, Sophie
name: Lacabaratz, Christine
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Intra- and inter-assay precision for Millipore QCs. %CV concentration for each of the 13 plates calculated using Millipore QCs (QC1 = high and QC2 = low) duplicates for the selected 15-plex Millipore magnetic kit (see Material and Methods). IL-23 and IL-1β %CVs were not calculated due to concentration values  ULOQ, respectively. Mean concentration values of Millipore QCs (QC1 = high and QC2 = low) duplicates (pg/ml) and %CVs of mean concentration calculated using the 13 inter-plates mean concentration values for the selected 15-plex Millipore magnetic kit (see Material and Methods section for detailed analytes). IL-23 and IL-1β %CVs were not calculated due to concentration values  ULOQ, respectively. (PDF 252 kb)
Additional file 8: of Optimization and evaluation of Luminex performance with supernatants of antigen-stimulated peripheral blood mononuclear cells
Creators: name: Surenaud, Mathieu
name: Manier, Céline
name: Richert, Laura
name: Thiébaut, Rodolphe
name: Levy, Yves
name: Hue, Sophie
name: Lacabaratz, Christine
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Absence of linear correlation between SD and mean concentration values. SD calculated using culture triplicates for NS, PPD- and SEB-stimulated PBMC from TB-infected patient plotted against IFNγ, IL-5 and IL-17A corresponding mean concentration values for Ozyme, Millipore and Bio-Rad kits. (PDF 14 kb)
Additional file 1: Figure S1. of Optimization and evaluation of Luminex performance with supernatants of antigen-stimulated peripheral blood mononuclear cells
Creators: name: Surenaud, Mathieu
name: Manier, Céline
name: Richert, Laura
name: Thiébaut, Rodolphe
name: Levy, Yves
name: Hue, Sophie
name: Lacabaratz, Christine
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Intra-laboratory reproducibility with 11-day cultures. Results after 11-day cultures of PBMC from two representative HIV-infected patients (A and B, CD4 count > 500 mm3, HIV-1 RNA
Additional file 2: Figure S2. of Optimization and evaluation of Luminex performance with supernatants of antigen-stimulated peripheral blood mononuclear cells
Creators: name: Surenaud, Mathieu
name: Manier, Céline
name: Richert, Laura
name: Thiébaut, Rodolphe
name: Levy, Yves
name: Hue, Sophie
name: Lacabaratz, Christine
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Intra-laboratory reproducibility with 2-day cultures. Results after 2-day cultures of PBMC from two representative HIV-infected patients (A and B, CD4 count > 500 mm3, HIV-1 RNA
Additional file 3: of Optimization and evaluation of Luminex performance with supernatants of antigen-stimulated peripheral blood mononuclear cells
Creators: name: Surenaud, Mathieu
name: Manier, Céline
name: Richert, Laura
name: Thiébaut, Rodolphe
name: Levy, Yves
name: Hue, Sophie
name: Lacabaratz, Christine
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Hematology

description: PBMC viability over 7 days of culture. PBMC Viability (%) from one healthy donor for two different experiments was determined by Acridine Orange/Propidium iodide (AOPI) staining with Auto 2000 cellometer (Nexcelom) with NS-, PPD (1 μg/ml)-, or SEB (10 or 100 ng/ml)-stimulated PBMC for 1 to 7 days. (PDF 184 kb)
Additional file 1: of End stage renal disease patients have a skewed T cell receptor Vβ repertoire
Creators: name: Huang, Ling
name: Langerak, Anton
name: Wolvers-Tettero, Ingrid
name: Meijers, Ruud
name: Baan, Carla
name: Litjens, Nicolle
name: Betjes, Michiel
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Figure S1. Absolute number of circulating CD4+ and CD8+ T cells in young (n = 8) and elderly healthy individuals (HI, n = 8) with skewing in TCR Vβ repertoire compared to age-matched HI without skewing in TCR Vβ repertoire (young n = 18; elderly n = 17). Figure S2. Absolute number of CD31-expressing naive and relative telomere length (RTL) of CD4+ and CD8+ T cells of healthy individuals (HI) with skewing in TCR Vβ repertoire compared to age-match HI without skewing in TCR Vβ repertoire. Figure S3. A typical example of the gating strategy to dissect the different T cell subsets prior to sorting (A) and the analysis of the purity of CD4+ naive/memory sorted samples (B). Supplementary materials and methods. (PDF 83890 kb)
Additional file 1: Table S1. of Functional diversity of CTCFs is encoded in their binding motifs
Creators: name: Rongxin Fang
name: Chengqi Wang
name: Skogerbo, Geir
name: Zhihua Zhang
Publisher: name: Figshare
Year: 2015
Subjects: subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: CTCF ChIP-seq data. Cell lines and statistics for the ChIP-seq data used in the study. (DOCX 55Â kb)
Briefing Paper: how is technological transformation disrupting labour markets across England?
Creators: name: Rohenkohl, Bertha
name: Clarke, Jonathan
name: Pissarides, Christopher
name: Thomas, Anna
Publisher: name: Zenodo
Year: 2024

description: We are at a critical juncture in the structural transformation of the economy, largely driven by AI and automation technologies. This transformation is already having profound impacts on access to work, the quality of work, and workers’ wellbeing. To unlock the potential of people and places across the country, we need to understand how good work is created, shaped, distributed and disrupted – and the mechanisms through which changes to work are taking place.

The Disruption Index (DI) changes how these societal challenges are perceived, assessed and addressed. It provides the first panoramic overview of the scale and trajectories of technological transformation across the country, tracking indicators across the technology lifecycle - from investment, infrastructure and the innovation ecosystem to education. The DI enables exploration of the primary components of technological transformation, our readiness for it and the wide-ranging consequences of it, helping policymakers identify the most impactful access points for intervention.

Our analysis demonstrates that the demand-side and supply-side risks and opportunities associated with technological transformation differ markedly in regional contexts, playing out with striking asymmetries across multiple domains - from access to capital and ICT infrastructure to education. Highlighting the pronounced impacts on different regional inequalities, it provides an empirical foundation for an evaluation of social and economic risks, impacts and implications of AI and automation technologies across the country. 

This briefing outlines IFOW’s initial findings from the full DI report. A Technical Report on how the DI has been constructred is also available. This will be followed by policy recommendations and a series of deeper dives as the Pissarides Review progresses. The DI data will be made available through an interactive dashboard shortly, and our work tracking trends in access to good work – the Good Work Time Series 2024 – can be found here. For more information, see ways to contact IFOW on the last page of this briefing.
Dimelaena Norman
Creators: name: Ai, Min
name: Zhong, Qiuyi
name: Scheidegger, Christoph
name: Wang, Lisong
name: Wang, Xinyu
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Fungi
Ascomycota
Lecanoromycetes
Caliciales
Caliciaceae
Dimelaena

description: Key to Dimelaena species with usnic acid:
1. Marginal lobes convex, loosely attached to the substrate; edges of the areolae usually dark; pycnidia numerous ............. D. oreina
- Marginal lobes plane and closely attached to the substrate; edges of the areolae rarely dark; pycnidia rare ....................................2
2. Apothecia adnate and apothecia margins obvious, upper surface grayish-yellow, with whitish pruina ............................. D. tibetica
- Apothecia innate and apothecia margins absent or not obvious, upper surface yellowish-green, without pruina........... D. altissima
description: Published as part of Ai, Min, Zhong, Qiuyi, Scheidegger, Christoph, Wang, Lisong & Wang, Xinyu, 2022, Revision of Dimelaena Norman (Caliciaceae, Ascomycota) species containing usnic acid reveals a new species and a new combination from China, pp. 259-272 in Phytotaxa 574 (4) on page 264, DOI: 10.11646/phytotaxa.574.4.1, http://zenodo.org/record/7389058
Additional file 2: of Functional diversity of CTCFs is encoded in their binding motifs
Creators: name: Rongxin Fang
name: Chengqi Wang
name: Skogerbo, Geir
name: Zhihua Zhang
Publisher: name: Figshare
Year: 2015
Subjects: subject: Molecular Biology
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Supplementary information. (DOCX 19Â kb)
title: The “Journal of Functional Morphology and Kinesiology” Journal Club Series
title: Resistance Training
titleType: Subtitle
Creators: name: Paoli, Antonio
name: Moro, Tatiana
name: Lorenzetti, Silvio
name: Seiler, Jan
name: Lüthy, Fabian
name: Gross, Micah
name: Roggio, Federico
name: Chaabene, Helmi
name: Musumeci, Giuseppe
Publisher: name: Universität Potsdam
Year: 2024
Subjects: subject: 610 Medizin und Gesundheit

description: We are glad to introduce the Second Journal Club of Volume Five, Second Issue. This edition is focused on relevant studies published in the last few years in the field of resistance training, chosen by our Editorial Board members and their colleagues. We hope to stimulate your curiosity in this field and to share with you the passion for the sport, seen also from the scientific point of view. The Editorial Board members wish you an inspiring lecture.
description: Zweitveröffentlichungen der Universität Potsdam : Humanwissenschaftliche Reihe; 866
Additional file 1: of Beclin 1 regulates neuronal transforming growth factor-β signaling by mediating recycling of the type I receptor ALK5
Creators: name: O’Brien, Caitlin
name: Bonanno, Liana
name: Zhang, Hui
name: Wyss-Coray, Tony
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Figure S1: The TGF-β signaling pathway. Figure S2: Specificity of the beclin 1 antibody. Figure S3: Beclin 1 localization in COS7 cells. Figure S4: Control data related to the recycling assay (Fig 6). (PDF 9708 kb)
Additional file 2: of Identification of DNA-binding proteins using multi-features fusion and binary firefly optimization algorithm
Creators: name: Zhang, Jian
name: Gao, Bo
name: Haiting Chai
name: Zhiqiang Ma
name: Guifu Yang
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Biochemistry
subject: Space Science
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Plant Biology

description: The large-scale testing dataset compiled from UniProt. (PDF 477 kb)
Additional file 1: of Identification of DNA-binding proteins using multi-features fusion and binary firefly optimization algorithm
Creators: name: Zhang, Jian
name: Gao, Bo
name: Haiting Chai
name: Zhiqiang Ma
name: Guifu Yang
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: 60506 Virology

description: The main dataset and DBP189 used in this study. (PDF 751 kb)
Additional file 2: of A flexible tool to plot a genomic map for single nucleotide polymorphisms
Creators: name: Fuquan Zhang
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Plotting examples. Examples to plot the map with other options. (PDF 193Â kb)
Additional file 1: of A flexible tool to plot a genomic map for single nucleotide polymorphisms
Creators: name: Fuquan Zhang
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: mapsnp manual. (PDF 90Â kb)
Additional file 1 of Integrating modern and herbal medicines in controlling malaria: experiences of orthodox healthcare providers in Ghana
Creators: name: Ampomah, Irene G.
name: Ampomah, Genevieve A.
name: Emeto, Theophilus I.
Publisher: name: figshare
Year: 2024
Subjects: Medicine
Pharmacology
Cancer
Science Policy
Computational Biology

description: Supplementary Material 1
Additional file 2 of Integrating modern and herbal medicines in controlling malaria: experiences of orthodox healthcare providers in Ghana
Creators: name: Ampomah, Irene G.
name: Ampomah, Genevieve A.
name: Emeto, Theophilus I.
Publisher: name: figshare
Year: 2024
Subjects: Medicine
Pharmacology
Cancer
Science Policy
Computational Biology

description: Supplementary Material 2
MOESM2 of Transcriptome analysis reveals global regulation in response to CO2 supplementation in oleaginous microalga Coccomyxa subellipsoidea C-169
Creators: name: Huifeng Peng
name: Wei, Dong
name: Chen, Gu
name: Chen, Feng
Publisher: name: Figshare
Year: 2016
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences

description: Additional file 2. Additional Tables and Figures.
Additional file 1 of Seismic activity around shallow plate boundary near westernmost Nankai Trough revealed by ocean bottom seismometer observation
Creators: name: Hu, Ching-Yu
name: Shinohara, Masanao
name: Yamashita, Yusuke
name: Tonegawa, Takashi
name: Yamada, Tomoaki
name: Akuhara, Takeshi
name: Mochizuki, Kimihiro
Publisher: name: figshare
Year: 2024
Subjects: subject: Geophysics
subject: FOS: Earth and related environmental sciences

description: Supplementary Material 1.
title: Mykotoxine in Pflanzendrinks: mehr Daten erforderlich: Stellungnahme Nr. 029/2024 des BfR vom 25. Juni 2024
Creators: name: Bundesinstitut Für Risikobewertung
Publisher: name: Bundesbehörden und Einrichtungen im Geschäftsbereich des Bundesministeriums für Ernährung und Landwirtschaft (BMEL)
Year: 2024
Subjects: subject: 000

description: BfR-Stellungnahmen, vol. 2024, no. 029
Additional file 2: of Chinese herbal medicine Tangshen Formula treatment of patients with type 2 diabetic kidney disease with macroalbuminuria: study protocol for a randomized controlled trial
Creators: name: Meihua Yan
name: Yumin Wen
name: Liping Yang
name: XiâAi Wu
name: Xiaoguang Lu
name: Bingxuan Zhang
name: Weiping Huang
name: Li, Ping
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: Marine Biology
subject: Cancer
subject: Science Policy

description: Consent form. (PDF 361 kb)
Additional file 3: of Chinese herbal medicine Tangshen Formula treatment of patients with type 2 diabetic kidney disease with macroalbuminuria: study protocol for a randomized controlled trial
Creators: name: Meihua Yan
name: Yumin Wen
name: Liping Yang
name: XiâAi Wu
name: Xiaoguang Lu
name: Bingxuan Zhang
name: Weiping Huang
name: Li, Ping
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: Marine Biology
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Certificates of manufacturing quality of TSF and placebo. (PDF 270 kb)
YURTIMIZDA TA'LIM TIZIMINING BUGUNGI HOLATI. OLIY TA'LIMDAN SIFATLI TA'LIMGA  QADAM  VA OTM LARDA  NOMUTAXASISLIK  FANLARINING  O'RNI
Creators: name: Sagatov, I.R.
name: Ne'matullayev, J.R.
Publisher: name: Zenodo
Year: 2024

description: Mamlakatimizda talim tizimini bugungi holati. Oliy ta'lim muassasalaridagi talim sifati nechog'lik Jahon ta'lim standartlariga tug'ri keladi.Ta'lim tizimini qanday yul bilan isloh etish  lozim va bu borada yurtimizda olib borilayotgan chora tadbirlar.Prizidentimizning ta'lim tizimini yanada rivojlantirish yulida qilayotgan say-harakatlari.Ta'lim sifati shu darajada ketaversa yaqin kelajakda kadrlarning ilmiy saviyasi.Zamonaviy ta'limda Axborot texnologiyalari, tarix va matematikani urni.
Spatial architecture of myeloid and T cells orchestrates immune evasion and clinical outcome in lung cancer.
Creators: name: Enfield, Katey SS
name: Colliver, Emma
name: Lee, Claudia
name: Magness, Alastair
name: Moore, David A
name: Sivakumar, Monica
name: Grigoriadis, Kristiana
name: Pich, Oriol
name: Karasaki, Takahiro
name: Hobson, Philip S
name: Levi, Dina
name: Veeriah, Selvaraju
name: Puttick, Clare
name: Nye, Emma L
name: Green, Mary
name: Dijkstra, Krijn K
name: Shimato, Masako
name: Akarca, Ayse U
name: Marafioti, Teresa
name: Salgado, Roberto
name: Hackshaw, Allan
name: Consortium, TRACERx
name: Jamal-Hanjani, Mariam
name: van Maldegem, Febe
name: McGranahan, Nicholas
name: Glass, Benjamin
name: Pulaski, Hanna
name: Walk, Eric
name: Reading, James L
name: Quezada, Sergio A
name: Hiley, Crispin T
name: Downward, Julian
name: Sahai, Erik
name: Swanton, Charles
name: Angelova, Mihaela
Publisher: name: The Francis Crick Institute
Year: 2024
Subjects: classificationCode: Tumour Biology
subject: Tumour Biology
classificationCode: Signalling & Oncogenes
subject: Signalling & Oncogenes
classificationCode: Immunology
subject: Immunology
subject: FOS: Clinical medicine
classificationCode: Genetics & Genomics
subject: Genetics & Genomics
classificationCode: Computational & Systems Biology
subject: Computational & Systems Biology
classificationCode: Cell Biology
subject: Cell Biology
classificationCode: Imaging
subject: Imaging

description: Understanding the role of the tumour microenvironment (TME) in lung cancer is critical to improving patient outcome. We identified four histology-independent archetype TMEs in treatment-naive early-stage lung cancer using imaging mass cytometry in the TRACERx study (n=81 patients/198 samples/2.3million cells). In immune-hot adenocarcinomas, spatial niches of T cells and macrophages increased with clonal neoantigen burden, whereas such an increase was observed for niches of plasma and B cells in immune-excluded squamous cell carcinomas (LUSC). Immune-low TMEs were associated with fibroblast barriers to immune infiltration. The fourth archetype, characterised by sparse lymphocytes and high tumour-associated neutrophil (TAN) infiltration, had tumour cells spatially separated from vasculature and exhibited low spatial intratumour heterogeneity. TAN-High LUSC had frequent PIK3CA mutations. TAN-High tumours harboured recently expanded and metastasis-seeding subclones and had a shorter disease-free survival independent of stage. These findings delineate genomic, immune and physical barriers to immune surveillance and implicate neutrophil-rich TMEs in metastasis.
Additional file 3: of Overexpression of a bifunctional enzyme, CrtS, enhances astaxanthin synthesis through two pathways in Phaffia rhodozyma
Creators: name: Chi, Shuang
name: Yanfeng He
name: Ren, Jie
name: Su, Qian
name: Xingchao Liu
name: Chen, Zhi
name: Mingan Wang
name: Li, Ying
name: Jilun Li
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology

description: Figure S2. Standard curves for Î˛-actin (a), GAL4 DNA binding domain (DNA-BD) (b) and Estimated copy numbers (PCN) of two plasmids in strains CS19 and CSR19 (C). A 10-fold serial dilution series of pGBKT7-actin, ranging from 1x104 to 1x109 copies/ÎźL, was used to construct standard curves using absolute qPCR in triplicate with BDQP and actinQP2 primer sets. Each curve was generated by plotting Cp values against the logarithm of initial template copy number (n= 2). R2: coefficient of determination.
Additional file 1 of A meta-analysis comparing open and minimally invasive cervical tumor surgery wound infection and postoperative complications
Creators: name: Song, Ran
name: Ma, Mingming
name: Yang, Nana
name: Chen, Chunfang
name: Wang, Huan
name: Li, Juan
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: Mental Health
subject: Infectious Diseases
subject: FOS: Health sciences

description: Supplementary Material 1
Additional file 5: of Overexpression of a bifunctional enzyme, CrtS, enhances astaxanthin synthesis through two pathways in Phaffia rhodozyma
Creators: name: Chi, Shuang
name: Yanfeng He
name: Ren, Jie
name: Su, Qian
name: Xingchao Liu
name: Chen, Zhi
name: Mingan Wang
name: Li, Ying
name: Jilun Li
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Figure S4. Detection of the unknown carotenoid by 1H NMR (500 MHz) and 13C NMR (125 MHz) spectroscopy. The 1H and 13C NMR spectral data of the unknown carotenoid were assigned by 2D COSY experiment, which showed it was identical with those of HDCO, which is the major product of the monocyclic carotenoid biosynthesis pathway in P. rhodozyma.
Rethinking Doctoral Wellbeing: A Relational Approach to the Mental Health Crisis in Academia
Creators: name: Kalenjuk, Elvira
name: Coventry, Jessica
name: de Mello Heredia, Jimena
name: Zheng, Evan
name: Suraya, Fatona
name: Alhaj Hasan, Fatima
name: Arokia Mary, S
name: Kristiani, Reneta
name: Hattersley, Sara
name: Pretorius, Lynette
Publisher: name: Monash University
Year: 2024
Subjects: classificationCode: 390303
subject: Higher education
classificationCode: 390412
subject: Teacher and student wellbeing
classificationCode: 350507
subject: Workplace wellbeing and quality of working life

description: The mental health crisis among doctoral students has reached a critical level, with high rates of anxiety, depression, and burnout that severely impact their academic performance and overall wellbeing. This paper offers a novel perspective by reframing doctoral wellbeing as fundamentally relational, examining how mental health is influenced by interconnected factors. We explore the complex pressures faced by doctoral students, including academic demands, student-supervisor relationships, financial insecurity, and cultural transitions, while emphasising the importance of supportive networks, intersectional identity considerations, and institutional structures. Our critical review identifies significant barriers to seeking help, the role of stigma, and systemic challenges within academic institutions that exacerbate mental health challenges for marginalised groups. Building on this relational understanding, we provide actionable recommendations at the systemic, community, and individual levels to foster a more inclusive, supportive, and mentally healthy academic environment. These recommendations include providing increased access to specialised mental health services, promoting mental health literacy, prioritising work-life balance, and prescribing equitable financial support, laying a foundation for sustainable change in doctoral education.
Additional file 7: of Overexpression of a bifunctional enzyme, CrtS, enhances astaxanthin synthesis through two pathways in Phaffia rhodozyma
Creators: name: Chi, Shuang
name: Yanfeng He
name: Ren, Jie
name: Su, Qian
name: Xingchao Liu
name: Chen, Zhi
name: Mingan Wang
name: Li, Ying
name: Jilun Li
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Inorganic Chemistry

description: Figure S5. Growth (cell dry weight), astaxanthin concentration, and astaxanthin yield as a function of time for CSR19 cultured in a 7.5-L bioreactor. a Cell dry weight was maximal (24.5 g/L) at the end of the exponential phase. b Astaxanthin accumulated quickly from 40 to 48 h, and the level did not change notably thereafter. Maximal values were 27.8 mg/L for astaxanthin yield and 1200 Îźg/g for astaxanthin concentration.
Additional file 1 of Enhancing intercultural competence of German medical students through innovative teaching on medical ethics with a focus on Muslim patients – a pilot study
Creators: name: Tekbaş, Aysun
name: Mauntel, Arian
name: Lehmann, Thomas
name: Tautenhahn, Hans-Michael
name: Settmacher, Utz
name: Festl-Wietek, Teresa
name: Herrmann-Werner, Anne
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy
subject: Virology

description: Supplementary Material 1.
Additional file 1: of Overexpression of a bifunctional enzyme, CrtS, enhances astaxanthin synthesis through two pathways in Phaffia rhodozyma
Creators: name: Chi, Shuang
name: Yanfeng He
name: Ren, Jie
name: Su, Qian
name: Xingchao Liu
name: Chen, Zhi
name: Mingan Wang
name: Li, Ying
name: Jilun Li
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences

description: Figure S1. Structure of vectors used for overexpression of CrtS (astaxanthin synthase) in P. rhodozyma strain MK19. a: pGBKT7-crtSr containing P. rhodozyma crtS gene Rbs. b: pGBKT7-crtS containing Rbs within pGBKT7 (vector carrying). ADH1 promoter and ADH1 terminator refer to ADH1 from S. cerevisiae.
title: Building Resilient Coastal Communities through Nature-based Solutions and Empowerment Tools
Creators: name: Sieber, Ina Maren
name: Carrasco, A. Rita
name: Gañán de Molina, Cecilia
name: Prall, Mia
name: Tiwari, Ananya
name: Ntemiri, Spyridoula
name: Bunnefeld, Nils
name: Pontón Cevallos, José
Publisher: name: Universität Kassel
Year: 2024
Subjects: subject: nature-based solutions
subject: social-ecological resilience
subject: empowerment
subject: ecosystem-based adaptation
classificationCode: 500
subject: 500
classificationCode: Küste
subject: Küste
classificationCode: Naturnahe Gestaltung
subject: Naturnahe Gestaltung
classificationCode: Resilienz
subject: Resilienz
classificationCode: Empowerment
subject: Empowerment
classificationCode: Anpassung
subject: Anpassung
classificationCode: Ökosystem
subject: Ökosystem

description: Full title of the request: “How can community empowerment tools and nature-based solutions contribute to addressing coastal challenges and building resilient communities?”
description:
This report provides an evidence base on how Nature-based Solutions (NbS) and Empowerment Tools (ET) can support resilience in coastal communities. Using a Rapid Evidence Assessment (REA), it synthesises the current state of the evidence concerning the role of NbS and community ET in addressing coastal challenges such as climate change across Europe. The outcomes and impacts of such approaches in fostering empowerment and resilience within these communities are presented, including methods and indicators to report and measure empowerment. This report was developed by an Eklipse Expert Working Group to respond to a request put forward by the Horizon Europe EmpowerUS project and is targeted for policy- and decisionmakers, researchers and practitioners, exploring the nexus between coastal resilience, NbS and empowerment. Through a great range of recommendations for research and policy, we hope to encourage to enhance resilience of coastal communities by ensure a wide dissemination of  the knowledge to a broad set of stakeholders.
Additional file 1: of Prediction of protein solvent accessibility using PSO-SVR with multiple sequence-derived features and weighted sliding window scheme
Creators: name: Zhang, Jian
name: Wenhan Chen
name: Pingping Sun
name: Xiaowei Zhao
name: Zhiqiang Ma
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biophysics
subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences

description: PSI-BLAST-based Features.
Additional file 1 of Advancement in scanning magnetic microscopy utilizing high-sensitivity room-temperature TMR sensors for geological applications
Creators: name: Oda, Hirokuni
name: Kumagai, Seiji
name: Fujiwara, Kosuke
name: Matsuzaki, Hitoshi
name: Wagatsuma, Hiroshi
name: Oogane, Mikihiko
name: Kubota, Hitoshi
name: Fukuyo, Naoto
name: Tanimoto, Akihiro
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Space Science
subject: Medicine
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy

description: Additional file 1.
Stilbochlora Engel
Creators: name: Engel, Michael S.
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Halictidae
Stilbochlora

description: Preliminary Key to Species of Stilbochlora
(females only)
1. Basal area of propodeum with numerous, closely spaced, basal striae (Figs. 16–18), striae reaching to midlength of basal area or beyond ....................... 2
—. Basal area of propodeum with short, sparse, basal striae (Fig. 15), striae scarcely reaching midlength of basal area and widely separated (Figs. 11, 15), sometimes striae somewhat effaced .................... S. eickworti (Engel et al.)
2. Basal area of propodeum with striae extending well beyond midlength, medially reaching or nearly to rounded posterior border with posterior surface (Figs. 12, 13), giving striate area a roughly triangular shape (Figs. 16, 17) ...... 3
—. Basal area of propodeum with striae reaching to about midlength of basal area (Figs. 14, 18), separated from rounded posterior border with posterior surface by about ocellar diameter, not projecting medially, thus striate area of a crescent shape (Fig. 18) ................................................... S. wedmanorum, n. sp.
3. Integument brilliant metallic green with predominantly golden coppery highlights (Figs. 1, 2, 9, 12, 16); scape largely testaceous; clypeal apex testaceous (Fig. 9); legs largely light testaceous .............................. S. graceae, n. sp.
—. Integument brilliant metallic blue green with green to purple highlights (Figs. 3, 4, 8, 13, 17); scape dark brown; clypeal apex dark brown (Fig. 8); legs largely dark brown .......................................................................... S. kateae, n. sp.
description: Published as part of Engel, Michael S., 2019, New species of the augochlorine bee genus Stilbochlora, with a preliminary key (Hymenoptera: Halictidae), pp. 1-15 in Journal of Melittology 2019 (89) on page 14, DOI: 10.17161/jom.v0i89.11734, http://zenodo.org/record/8057435
Additional file 2: of Prediction of protein solvent accessibility using PSO-SVR with multiple sequence-derived features and weighted sliding window scheme
Creators: name: Zhang, Jian
name: Wenhan Chen
name: Pingping Sun
name: Xiaowei Zhao
name: Zhiqiang Ma
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 60506 Virology

description: Performance of Various window sizes for the least square linear regression model.
Additional file 2 of Symbiotic bacteria associated with entomopathogenic nematodes showed molluscicidal activity against Biomphalaria glabrata, an intermediate host of Schistosoma mansoni
Creators: name: Ardpairin, Jiranun
name: Subkrasae, Chanakan
name: Dumidae, Abdulhakam
name: Pansri, Supawan
name: Homkaew, Chanatinat
name: Meesil, Wipanee
name: Kumchantuek, Tewarat
name: Phoungpetchara, Ittipon
name: Dillman, Adler R.
name: Pavesi, Coralie
name: Bode, Helge B.
name: Tandhavanant, Sarunporn
name: Thanwisai, Aunchalee
name: Vitta, Apichat
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 2: Table S2 The secondary metabolites derived from symbiotic bacteria Xenorhabdus and Photorhabdus. These metabolites were predicted from LC–MS/MS analysis of bacterial crude extracts.
Additional file 4: of Overexpression of a bifunctional enzyme, CrtS, enhances astaxanthin synthesis through two pathways in Phaffia rhodozyma
Creators: name: Chi, Shuang
name: Yanfeng He
name: Ren, Jie
name: Su, Qian
name: Xingchao Liu
name: Chen, Zhi
name: Mingan Wang
name: Li, Ying
name: Jilun Li
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biophysics
subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Figure S3. Detection of the unknown carotenoid by high resolution mass spectrometry. High resolution MS analysis showed that the measured mass is 565.40363 for [M+H]+, compatible with the chemical formula C40H52O2, and the exact calculated mass is 565.40387. The result of MS/MS showed the fragment ion peaks at m/z 472.33346 ([M-92]+), m/z 458.31810 ([M-106]+) and m/z 547.39337 ([M+H-H2O]+).