cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
On integrability of zero-range chipping models with factorized steady state
Creators: name: Povolotsky, A. M.
Publisher: name: arXiv
Year: 2013
Subjects: subject: Mathematical Physics (math-ph)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: Conditions of integrability of general zero range chipping models with factorized steady state, which were proposed in [Evans, Majumdar, Zia 2004 J. Phys. A 37 L275], are examined. We find a three-parametric family of hopping probabilities for the models solvable by the Bethe ansatz, which includes most of known integrable stochastic particle models as limiting cases. The solution is based on the quantum binomial formula for two elements of an associative algebra obeying generic homogeneous quadratic relations, which is proved as a byproduct. We use the Bethe ansatz to solve an eigenproblem for the transition matrix of the Markov process. On its basis we conjecture an integral formula for the Green function of evolution operator for the model on an infinite lattice and derive the Bethe equations for the spectrum of the model on a ring.
description: 27 pages, 1 figure, final corrections: references updated, mistypes corrected, figure revised
On the location of the gamma-ray emission region for 21 flat spectrum radio quasars with quasi-simultaneous observations
Creators: name: Cao, Gang
name: Wang, Jiancheng
Publisher: name: arXiv
Year: 2013
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: We try to infer the location of the GeV emission region for 21 flat spectrum radio quasars (FSRQs) with quasi-simultaneous spectral energy distributions (SEDs), in which the SEDs of 21 FSRQs are reproduced by the one-zone leptonic model including the synchrotron-self Compton (SSC) and external Compton (EC) processes. We suggest that the X-ray emission could be produced by the SSC process and the GeV emission could come from the EC process. The EC emission could originate from the inverse Compton (IC) scattering of photons from the broad line region (BLR) and accretion disk or dust torus by the same electron population, which mainly depend on the location of the $γ$-ray emission region. We propose a method to constrain the location of the GeV emission region based on the spectral shapes. When the GeV emission is located within the BLR, the IC scattering could occur at the Klein-Nishina regime and produce a broken/steep spectrum in the GeV energy band. When the GeV emission is produced outside the BLR, the IC scattering could take place at the Thomson regime and the GeV spectrum would have the same spectral index as the optical-infrared spectrum. We infer that the location of the GeV emission region is inside the BLR for 5 FSRQs and beyond the BLR for 16 FSRQs. Our results show that the ratio of the magnetic field and electron energy density is close to equipartition condition for 21 FSRQs.
description: 11 pages, 2 figures, accepted for publication in MNRAS
Macruromys Stein 1933
Creators: name: Musser, Guy G.
name: Carleton, Michael D.
Publisher: name: Zenodo
Year: 1993
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Muridae
Macruromys

description: Macruromys Stein, 1933. Z. Säugetierk., 8:94. TYPE SPECIES: Macruromys elegans Stein, 1933. COMMENTS: Member of the New Guinea Old Endemics (Musser, 1981c). Distributional and biological information summarized by Flannery (1990b).
description: Published as part of Guy G. Musser & Michael D. Carleton, 1993, Order Rodentia - Family Muridae, pp. 501-755 in Mammal Species of the World (2 nd Edition), Washington and London :Smithsonian Institution Press on page 607, DOI: 10.5281/zenodo.7353098
description: {"references": ["Stein, G. 1933. Weitere mitteilungen zur systematik papuanischer sauger. Zeitschrift fur Saugetierkunde, 8: 87 - 95.", "Musser, G. G. 1981 c. The giant rat of Flores and its relatives east of Borneo and Bali. Bulletin of the American Museum of Natural History, 169: 67 - 176.", "Flannery, T. F. 1990 b. Mammals of New Guinea. Robert Brown and Associates, 439 pp."]}
Resolved star formation in TNG100 central and satellite galaxies
Creators: name: McDonough, Bryanne
name: Curtis, Olivia
name: Brainerd, Tereasa
Publisher: name: arXiv
Year: 2023
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: Recent cosmological hydrodynamical simulations have produced populations of numerical galaxies whose global star-forming properties are in good agreement with those of observed galaxies. Proper modeling of energetic feedback from supernovae and active galactic nuclei is critical to the ability of simulations to reproduce observed galaxy properties and, historically, such modelling has proven to be a challenge. Here, we analyze local properties of central and satellite galaxies in the $z=0$ snapshot of the TNG100 simulation as a test of feedback models. We generate a face-on projection of stellar particles in TNG100 galaxies, from which we demonstrate the existence of a resolved star-forming main sequence ($Σ_{SFR}$--$Σ_*$ relation) with a slope and normalization that is in reasonable agreement with previous studies. We also present radial profiles of various galaxy populations for two parameters: the distance from the resolved main sequence line ($ΔΣ_{SFR}$) and the luminosity-weighted stellar age ($age_L$). We find that, on average, high-mass central and satellite galaxies quench from the inside-out, while low-mass central and satellite galaxies have similar, flatter profiles.
The concept of quasi-integrability
Creators: name: Ferreira, L. A.
name: Luchini, G.
name: Zakrzewski, Wojtek J.
Publisher: name: arXiv
Year: 2013
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Mathematical Physics (math-ph)
subject: Exactly Solvable and Integrable Systems (nlin.SI)
subject: FOS: Physical sciences

description: We show that certain field theory models, although non-integrable according to the usual definition of integrability, share some of the features of integrable theories for certain configurations. Here we discuss our attempt to define a "quasi-integrable theory", through a concrete example: a deformation of the (integrable) sine-Gordon potential. The techniques used to describe and define this concept are both analytical and numerical. The zero-curvature representation and the abelianisation procedure commonly used in integrable field theories are adapted to this new case and we show that they produce asymptotically conserved charges that can then be observed in the simulations of scattering of solitons.
description: Submitted to the Proceedings of the 2nd International Workshop on Nonlinear and Modern Mathematical Physics, March 9-11, 2013, Tampa, Florida, USA
Extinction and Dust Geometry in M83 HII Regions: A Hubble Space Telescope/WFC3 Study
Creators: name: Liu, Guilin
name: Calzetti, Daniela
name: Hong, Sungryong
name: Whitmore, Bradley
name: Chandar, Rupali
name: O'Connell, Robert W.
name: Blair, William P.
name: Cohen, Seth H.
name: Frogel, Jay A.
name: Kim, Hwihyun
Publisher: name: arXiv
Year: 2013
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: We present HST/WFC3 narrow-band imaging of the starburst galaxy M83 targeting the hydrogen recombination lines (H$β$, H$α$ and Pa$β$), which we use to investigate the dust extinction in the HII regions. We derive extinction maps with 6 parsec spatial resolution from two combinations of hydrogen lines (H$α$/H$β$ and H$α$/Pa$β$), and show that the longer wavelengths probe larger optical depths, with $A_V$ values larger by $\gtrsim$1 mag than those derived from the shorter wavelengths. This difference leads to a factor $\gtrsim$2 discrepancy in the extinction-corrected H$α$ luminosity, a significant effect when studying extragalactic HII regions. By comparing these observations to a series of simple models, we conclude that a large diversity of absorber/emitter geometric configurations can account for the data, implying a more complex physical structure than the classical foreground "dust screen" assumption. However, most data points are bracketed by the foreground screen and a model where dust and emitters are uniformly mixed. When averaged over large ($\gtrsim$100--200 pc) scales, the extinction becomes consistent with a "dust screen", suggesting that other geometries tend to be restricted to more local scales. Moreover, the extinction in any region can be described by a combination of the foreground screen and the uniform mixture model with weights of 1/3 and 2/3 in the center ($\lesssim$2 kpc), respectively, and 2/3 and 1/3 for the rest of the disk. This simple prescription significantly improves the accuracy of the dust extinction corrections and can be especially useful for pixel-based analyses of galaxies similar to M83.
description: 7 pages, 4 figures, 1 table. Accepted for publication in ApJ Letters
Effect of imperfect Faraday mirrors on security of a Faraday-Michelson quantum cryptography system
Creators: name: Weilong, Wang
name: Ming, Gao
name: Zhi, Ma
Publisher: name: arXiv
Year: 2013
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The one-way Faraday-Michelson system is a very useful practical quantum cryptography system where Faraday mirrors(FMs) play an important role. In this paper we analyze the security of this system against imperfect FMs. We consider the security loophole caused by the imperfect FMs in Alice's and Bob's security zones. Then we implement a passive Faraday mirror attack in this system. By changing the values of the imperfection parameters of Alice's FMs, we calculate the quantum bit error rate between Alice and Bob induced by Eve and the probability that Eve obtains outcomes successfully. It is shown that the imperfection of one of Alice's two FMs makes the system sensitive to the attack. At last we give a modified key rate as a function of the Faraday mirror imperfections. The security analysis indicates that both Alice's and Bob's imperfect FMs can compromise the secure key.
description: 13 pages, 4 figures
Linear Least Squares Estimation of Fiber-Longitudinal Optical Power Profile
Creators: name: Sasai, Takeo
name: Takahashi, Minami
name: Nakamura, Masanori
name: Yamazaki, Etsushi
name: Kisaka, Yoshiaki
Publisher: name: arXiv
Year: 2023
Subjects: subject: Signal Processing (eess.SP)
subject: FOS: Electrical engineering, electronic engineering, information engineering

description: This paper presents a linear least squares method for fiber-longitudinal power profile estimation (PPE), which estimates an optical signal power distribution throughout a fiber-optic link at a coherent receiver. The method finds the global optimum in least square estimation of longitudinal power profiles, thus closely matching true optical power profiles and locating loss anomalies in a link with high spatial resolution. Experimental results show that the method achieves accurate PPE with an RMS error from OTDR of 0.18 dB. Consequently, it successfully identifies a loss anomaly as small as 0.77 dB, demonstrating the potential of a coherent receiver in locating even splice and connector losses. The method is also evaluated under a WDM condition with optimal system fiber launch power, highlighting its feasibility for use in operations. Furthermore, a fundamental limit for stable estimation and spatial resolution of least-squares-based PPE is quantitatively discussed in relation to the ill-posedness of PPE by evaluating the condition number of a nonlinear perturbation matrix.
description: 11 pages, 10 figures, accepted version for Journal of Lightwave Technology
Macruromys elegans Stein 1933
Creators: name: Musser, Guy G.
name: Carleton, Michael D.
Publisher: name: Zenodo
Year: 1993
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Muridae
Macruromys
Macruromys elegans

description: Macruromys elegans Stein, 1933. Z. Säugetierk., 8:95. TYPE LOCALITY: New Guinea, Irian Jaya, Weyland Range, Mt Kunupi, 1400-1800 m. DISTRIBUTION: Known only from the type locality. STATUS: IUCN - Insufficiently known. COMMENTS: Possibly endemic to Weyland Range. Still represented by very few specimens.
description: Published as part of Guy G. Musser & Michael D. Carleton, 1993, Order Rodentia - Family Muridae, pp. 501-755 in Mammal Species of the World (2 nd Edition), Washington and London :Smithsonian Institution Press on page 607, DOI: 10.5281/zenodo.7353098
Multifractals of central place systems: models, dimension spectrums, and empirical analysis
Creators: name: Chen, Yanguang
Publisher: name: arXiv
Year: 2013
Subjects: subject: Physics and Society (physics.soc-ph)
subject: FOS: Physical sciences

description: Central place systems have been demonstrated to possess self-similar patterns in both the theoretical and empirical perspectives. A central place fractal can be treated as a monofractal with a single scaling process. However, in the real world, a system of human settlements is a complex network with multi-scaling processes. The simple fractal central place models are not enough to interpret the spatial patterns and evolutive processes of urban systems. It is necessary to construct multi-scaling fractal models of urban places. Based on the postulate of intermittent space filling, two typical multifractal models of central places are proposed in this paper. One model is put forward to reflect the process of spatial convergence (aggregation), and the generalized correlation dimension varies from 0.7306 to 1.3181; the other model is presented to describe the process of spatial divergence (diffusion), the generalized correlation dimension ranges from 1.6523 to 1.7118. As a case study, an analogy is drawn between the theoretical models and a system of cities and towns of Central Plains, China. A finding is that urban systems take on multifractal form, and can be modeled with multi-scaling fractals. This is a preliminary attempt to develop the theory of fractal central places, and the results are helpful for understanding the similarities and differences between the geographical process of spatial aggregation and that of spatial diffusion.
description: 31 pages, 9 figures, 7 tables
Levilactobacillus hammesii HAMMESII 2020, COMB. NOV.
Creators: name: Zheng, Jinshui
name: Wittouck, Stijn
name: Salvetti, Elisa
name: Franz, Charles M. A. P.
name: Harris, Hugh M. B.
name: Mattarelli, Paola
name: O'Toole, Paul W.
name: Pot, Bruno
name: Vandamme, Peter
name: Walter, Jens
name: Watanabe, Koichi
name: Wuyts, Sander
name: Felis, Giovanna E.
name: Gänzle, Michael G.
name: Lebeer, Sarah
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Bacteria
Firmicutes
Bacilli
Lactobacillales
Lactobacillaceae
Levilactobacillus
Levilactobacillus hammesii

description: DESCRIPTIONOF LEVILACTOBACILLUS HAMMESII COMB. NOV.
Levilactobacillushammesii (ham.me’si.i. N.L. gen. n. hammesii of Hammes, inrecognition of thescientist Walter P. Hammes, who contributed significantly to the taxonomy of lactic acid bacteria as well as the technology and microbial ecology of fermented foods).
Basonym: Lactobacillus hammesii Valcheva et al. 2005, 766 VP
Characteristics of the species are as described [294]. Strains produce antifungal fatty acids from linoleic acid [295]. The genome size of the type strain is 2.82 Mbp. The mol% G+C content of DNA is 49.4.
Isolatedfrom wheatand rye sourdoughs, ryegrass silages, and a municipal biogas plant.
Thetypestrainis LP38 T =TMW 1.1236 T = DSM 16381 T =CCUG 51325 T =CIP 108387 T =JCM 16170 T.
Genome sequence accession number: AZFS00000000.
16S rRNA gene accession number: AJ632219.
description: Published as part of Zheng, Jinshui, Wittouck, Stijn, Salvetti, Elisa, Franz, Charles M. A. P., Harris, Hugh M. B., Mattarelli, Paola, O'Toole, Paul W., Pot, Bruno, Vandamme, Peter, Walter, Jens, Watanabe, Koichi, Wuyts, Sander, Felis, Giovanna E., Gänzle, Michael G. & Lebeer, Sarah, 2020, A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae, pp. 2782-2858 in International Journal of Systematic and Evolutionary Microbiology 70 on pages 2837-2838, DOI: 10.1099/ijsem.0.004107, http://zenodo.org/record/4730536
Additional file 1 of Respiratory microbiome profiles differ by recent hospitalization and nursing home residence in patients on mechanical ventilation
Creators: name: Min-Gyung Baek
name: Woo, Seong Ji
name: Kim, Nam Eun
name: Chaeyun Baek
name: Sungho Won
name: Youngmi Kim
name: Lee, Jae Jun
name: Yi, Hana
name: Hong, Ji Young
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Physiology
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Table S1. Statistics for the relative abundances of bacterial taxa in ETAs of NHAI group based on GLMM analysis. Table S2. Association between the relative abundances of the bacterial taxa in the ETAs and clinical outcomes: results from GLMM analyses.
Macruromys major Riimmler 1935
Creators: name: Musser, Guy G.
name: Carleton, Michael D.
Publisher: name: Zenodo
Year: 1993
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Muridae
Macruromys
Macruromys major

description: Macruromys major Riimmler, 1935. Z. Säugetierk., 10: 105. TYPE LOCALITY: Papua New Guinea, Eastern Highlands Prov., Kratke Mtns, Buntibasa Dist, 4000-5000 ft m. DISTRIBUTION: New Guinea; known from a few mid-altitude localities on N slopes of Central Cordillera in Irian Jaya and Papua New Guinea, and on Huon Peninsula (Mt Rawlinson); see map in Flannery (1990b); limits unknown. COMMENTS: Phallic morphology and its systematic significance described by Lidicker (1968).
description: Published as part of Guy G. Musser & Michael D. Carleton, 1993, Order Rodentia - Family Muridae, pp. 501-755 in Mammal Species of the World (2 nd Edition), Washington and London :Smithsonian Institution Press on page 607, DOI: 10.5281/zenodo.7353098
description: {"references": ["Flannery, T. F. 1990 b. Mammals of New Guinea. Robert Brown and Associates, 439 pp."]}
Mean-field theory of baryonic matter for QCD in the large $N_{c}$ and heavy quark mass limits
Creators: name: Adhikari, Prabal
name: Cohen, Thomas D.
Publisher: name: arXiv
Year: 2013
Subjects: subject: Nuclear Theory (nucl-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We discuss theoretical issues pertaining to baryonic matter in the combined heavy-quark and large $N_c$ limits of QCD. Witten's classic argument that baryons and interacting systems of baryons can be described in a mean-field approximation with each of the quarks moving in an average potential due to the remaining quarks is heuristic. It is important to justify this heuristic description for the case of baryonic matter since systems of interacting baryons are intrinsically more complicated than single baryons due to the possibility of hidden color states---states in which the subsystems making up the entire baryon crystal are not color-singlet nucleons but rather colorful states coupled together to make a color-singlet state. In this work, we provide a formal justification of this heuristic prescription. In order to do this, we start by taking the heavy quark limit, thus effectively reducing the problem to a many-body quantum mechanical system. This problem can be formulated in terms of integrals over coherent states, which for this problem are simple Slater determinants. We show that for the many-body problem, the support region for these integrals becomes narrow at large $N_c$, yielding an energy which is well-approximated by a single coherent state---that is a mean-field description. Corrections to the energy are of relative order $1/N_c$. While hidden color states are present in the exact state of the heavy quark system, they only influence the interaction energy at sub-leading order in $1/N_{c}$.
description: 9 pages
A Study of Weakly Discontinuous Solutions for Hyperbolic Differential Equations Based on Wavelet Transform Methods
Creators: name: Gu, Shijie
Publisher: name: arXiv
Year: 2013
Subjects: subject: Analysis of PDEs (math.AP)
subject: FOS: Mathematics
subject: Primary 65T60, 49K20, Secondary 65M99

description: A new approach to prove the one-dimensional Cauchy problem's weakly discontinuous solutions for hyperbolic PDEs are on the characteristics is discussed in this paper. To do so, I use wavelet singularity detection methods or WTMM [1] based on two-dimensional wavelet transform and combine it with the Lipschitz index to strengthen the detection.
description: 9 pages, 2 figures, SIAM 2013 Annual Meeting, to appear in Int. J. Appl. Math. arXiv admin note: substantial text overlap with arXiv:1309.5403
Work Fluctuations in Ergotropic Heat Engines
Creators: name: Chesi, Giovanni
name: Macchiavello, Chiara
name: Sacchi, Massimiliano Federico
Publisher: name: arXiv
Year: 2023
Subjects: subject: Quantum Physics (quant-ph)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We study the work fluctuations in ergotropic heat engines, namely two-strokes quantum Otto engines where the work stroke is designed to extract the ergotropy (the maximum amount of work by a cyclic unitary evolution) from a couple of quantum systems at canonical equilibrium at two different temperatures, whereas the heat stroke thermalizes back the systems to their respective reservoirs. We provide an exhaustive study for the case of two qutrits whose energy levels are equally spaced at two different frequencies by deriving the complete work statistics. By varying the values of temperatures and frequencies, only three kinds of optimal unitary strokes are found: the swap operator $U_1$, an idle swap $U_2$ (where one of the qutrits is regarded as an effective qubit), and a non trivial permutation of energy eigenstates $U_3$, which indeed corresponds to the composition of the two previous unitaries, namely $U_3=U_2 U_1$. While $U_1$ and $U_2$ are Hermitian (and hence involutions), $U_3$ is not. This point has an impact on the thermodynamic uncertainty relations (TURs) which bound the signal-to-noise ratio of the extracted work in terms of the entropy production. In fact, we show that all TURs derived from a strong detailed fluctuation theorem are violated by the transformation $U_3$.
description: 30 pages, 21 figures. Improved version; new references
Additional file 2 of Respiratory microbiome profiles differ by recent hospitalization and nursing home residence in patients on mechanical ventilation
Creators: name: Min-Gyung Baek
name: Woo, Seong Ji
name: Kim, Nam Eun
name: Chaeyun Baek
name: Sungho Won
name: Youngmi Kim
name: Lee, Jae Jun
name: Yi, Hana
name: Hong, Ji Young
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Physiology
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 2: Figure S1. Longitudinal patterns of the relative OTU abundances of the dominant genera in the NHAI and non-NHAI groups. For the lines in a box and whisker plot: the extreme bars are the overall range, the bottom and top of the box are the 25th and 75th percentiles and the line inside the box is the 50th percentile (median). *P
Non-equilibrium steady states in the quantum XXZ spin chain
Creators: name: Sabetta, Thiago
name: Misguich, Grégoire
Publisher: name: arXiv
Year: 2013
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We investigate the dynamics of a critical XXZ spin-1/2 chain prepared in an inhomogeneous initial state with different magnetizations on the left and right halves. We simulate the real-time evolution using the time-evolving block decimation (TEBD) method. We follow the front propagation by measuring the magnetization and entanglement entropy profiles, and we focus on the situation where the initial state is not fully polarized. At long times, as in the free fermion case (T. Antal et al. 1999), a large central region develops where correlations become time-independent and translation invariant. The shape and speed of the fronts is studied numerically and we evaluate the stationary current as a function of initial magnetic field and as a function of the anisotropy Δ. We compare the results with the conductance of a Tomonaga-Luttinger liquid, and with the exact free-fermion solution at Δ=0. We also investigate the two-point correlations in the stationary region and find a good agreement with the "twisted" form obtained by J. Lancaster and A. Mitra (2010) using bosonization. Some deviations are nevertheless observed for strong currents.
description: 14 pages, 15 figures. v3: Improved content presentation, added two new figures and new references. Additional data on the fronts and their density oscillations was also added. To appear in Phy. Rev. B
Time-energy uncertainty relation for neutrino oscillations: historical development, applications and future prospects
Creators: name: Luciano, Giuseppe Gaetano
name: Smaldone, Luca
Publisher: name: arXiv
Year: 2023
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Time-energy uncertainty relation (TEUR) plays a fundamental role in quantum mechanics, as it allows to grasp peculiar aspects of a variety of phenomena based on very general principles and symmetries of the theory. Using the Mandelstam-Tamm method, TEUR has been recently derived for neutrino oscillations by connecting the uncertainty on neutrino energy with the characteristic time-scale of oscillations. Interestingly enough, the suggestive interpretation of neutrinos as unstable-like particles has proved to naturally emerge in this context. Further aspects have been later discussed in semiclassical gravity by computing corrections to the neutrino energy uncertainty in a generic stationary curved spacetime, and in quantum field theory, where the clock observable turns out to be identified with the non-conserved flavor charge operator. In the present work, we give an overview on the above achievements. In particular, we analyze the implications of TEUR and explore the impact of gravitational and non-relativistic effects on the standard condition for neutrino oscillations.
description: 20 pages, published version
Malacomys Milne-Edwards 1877
Creators: name: Musser, Guy G.
name: Carleton, Michael D.
Publisher: name: Zenodo
Year: 1993
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Muridae
Malacomys

description: Malacomys Milne-Edwards, 1877. Bull. Sci. Soc. Philom. Paris, ser. 6, 12: 10. TYPE SPECIES: Malacomys longipes Milne-Edwards, 1877. COMMENTS: Study of dental features led Misonne (1969: 106) to write that " Malacomys stands apart from all the other African genera by its unusual dental characters. This is an advanced genus which cannot be clearly related to any other one." However, external, cranial, and dental traits indicates Malacomys to be phylogenetically closely allied with Praomys, particularly through the morphologically annectant M. lukolelae, a species usually included in Praomys and relegated to the P. tullbergi complex (Van der Straeten and Dudu, 1990). Two revisions (Rautenbach and Schütter, 1978; Van der Straeten and Verheyen, 1979b) provided somewhat different evaluations of morphological variation and its interpretation in context of specific diversity.
description: Published as part of Guy G. Musser & Michael D. Carleton, 1993, Order Rodentia - Family Muridae, pp. 501-755 in Mammal Species of the World (2 nd Edition), Washington and London :Smithsonian Institution Press on page 607, DOI: 10.5281/zenodo.7353098
description: {"references": ["Misonne, X. 1969. African and Indo-Australian Muridae: Evolutionary trends. Annales Musee Royal de l'Afrique Centrale, Tervuren, Belgique, Serie IN- 8, Sciences Zoologiques, 172: 1 - 219.", "Van der Straeten, E., and A. M. Dudu. 1990. Systematics and distribution of Praomys from the Masako Forest Reserve (Zaire), with the description of a new species. Pp. 73 - 83, in Vertebrates in the tropics (G. Peters and R. Hutterer, eds.). Museum Alexander Koenig, Bonn, 424 pp.", "Van der Straeten, E., and W. N. Verheyen. 1979 b. Notes taxonomiques sur les Malacomys de l'Ouest africain avec redescription du patron chromosomique de Malacomys edwardsi (Mammalia, Muridae). Revue de Zoologie Africaine, 93: 10 - 35."]}
Additional file 1 of Clinical features of Japanese patients with exacerbations of chronic obstructive pulmonary disease
Creators: name: Tashiro, Hiroki
name: Kurihara, Yuki
name: Takahashi, Koichiro
name: Sadamatsu, Hironori
name: Haraguchi, Tetsuro
name: Tajiri, Ryo
name: Takamori, Ayako
name: Kimura, Shinya
name: Sueoka-Aragane, Naoko
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Science Policy
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Additional file 1. Table E1. Comparison of clinical characteristics in COPD patients with frequent exacerbation vs those without exacerbation. Table E2. Multivariate analysis of the clinical characteristics in COPD patients with frequent exacerbation vs those without exacerbation.
Levilactobacillus huananensis Zheng & Wittouck & Salvetti & Franz & Harris & Mattarelli & O'Toole & Pot & Vandamme & Walter & Watanabe & Wuyts & Felis & Gänzle & Lebeer 2020, COMB. NOV.
Creators: name: Zheng, Jinshui
name: Wittouck, Stijn
name: Salvetti, Elisa
name: Franz, Charles M. A. P.
name: Harris, Hugh M. B.
name: Mattarelli, Paola
name: O'Toole, Paul W.
name: Pot, Bruno
name: Vandamme, Peter
name: Walter, Jens
name: Watanabe, Koichi
name: Wuyts, Sander
name: Felis, Giovanna E.
name: Gänzle, Michael G.
name: Lebeer, Sarah
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Bacteria
Firmicutes
Bacilli
Lactobacillales
Lactobacillaceae
Levilactobacillus
Levilactobacillus huananensis

description: DESCRIPTIONOF LEVILACTOBACILLUS HUANANENSIS COMB. NOV.
Levilactobacillus huananensis (hua.nan.en’sis. N.L. masc. adj. huananensis, pertaining to Huanan, a county in the Heilongjiang province of China).
Basonym: Lactobacillus huananensis Long and Gu 2019, 2350 VP
Characteristics are described in [158]. The genome size of thetypestrainis 2.29 Mbp. The mol% G+C content of DNA is 47.5.
Isolatedfromfermented Chinesecabbage.
Thetypestrainis 151-2BT=CCM 8913 T = KCTC 21129 T =LMG 31063 T.
Genome sequence accession number: RHOC00000000.
16S rRNA gene accession number: MK110857.
description: Published as part of Zheng, Jinshui, Wittouck, Stijn, Salvetti, Elisa, Franz, Charles M. A. P., Harris, Hugh M. B., Mattarelli, Paola, O'Toole, Paul W., Pot, Bruno, Vandamme, Peter, Walter, Jens, Watanabe, Koichi, Wuyts, Sander, Felis, Giovanna E., Gänzle, Michael G. & Lebeer, Sarah, 2020, A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae, pp. 2782-2858 in International Journal of Systematic and Evolutionary Microbiology 70 on page 2838, DOI: 10.1099/ijsem.0.004107, http://zenodo.org/record/4730536
Pangeo 101: a community-centric, open, collaborative and scalable big geoscience data analytic platform
Creators: name: Odaka, Tina
name: Coca-Castro, Alejandro
name: Marasco, Pier Lorenzo
name: Iaquinta, Jean
name: Fouilloux, Anne
name: Eynard-Bontemps, Guillaume
Publisher: name: Zenodo
Year: 2022
Subjects: pangeo
foss4g
OSS
geospatial

description: Presentation given by the Pangeo community during the Pangeo FOSS4G workshop, Florence, 23 August 2022.
Time irreversible billiards with piecewise-straight trajectories
Creators: name: Casati, Giulio
name: Prosen, Tomaz
Publisher: name: arXiv
Year: 2013
Subjects: subject: Chaotic Dynamics (nlin.CD)
subject: FOS: Physical sciences

description: We introduce a new family of billiards which break time reversal symmetry in spite of having piece-wise straight trajectories. We show that our billiards preserve the ergodic and mixing properties of conventional billiards while they may turn into exponential the power law decay of correlations characteristic of Sinai type billiards. Such billiards can be implemented by squeezing the transverse magnetic field along lines or along one-dimensional manifolds.
description: 4 pages in RevTex with 4 figures
Malacomys cansdalei Ansell 1958
Creators: name: Musser, Guy G.
name: Carleton, Michael D.
Publisher: name: Zenodo
Year: 1993
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Muridae
Malacomys
Malacomys cansdalei

description: Malacomys cansdalei Ansell, 1958. Ann. Mag. Nat. Hist., ser. 13, 1:342. TYPE LOCALITY: Ghana, Oda. DISTRIBUTION: Forest zone of S Ghana, S Ivory Coast, and E Liberia. SYNONYMS: giganteus. COMMENTS: Part of the murine fauna endemic to West Africa (see account of Grammomys buntingi). Rautenbach and Schütter (1978) considered cansdalei a subspecies of M. longipes.
description: Published as part of Guy G. Musser & Michael D. Carleton, 1993, Order Rodentia - Family Muridae, pp. 501-755 in Mammal Species of the World (2 nd Edition), Washington and London :Smithsonian Institution Press on page 607, DOI: 10.5281/zenodo.7353098
Additional file 2 of The use of pasung for people with mental illness: a systematic review and narrative synthesis
Creators: name: Hidayat, Muhamad Taufik
name: Lawn, Sharon
name: Muir-Cochrane, Eimear
name: Oster, Candice
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Science Policy

description: Additional file 2: Table S2. Reports/discussion papers.
title: Эколого-экономическое и информационное обеспечение рационального природопользования в городских условиях
Creators: name: ELS IPR BOOKS
Publisher: name: Донской государственный технический университет
Year: 2019

description: Изложены концептуальные вопросы использования информационных технологий при формировании городского природопользования, принципы информационной деятельности в системе регулирования социоэкологоэкономического развития в городских условиях. Рассмотрены эколого-экономические аспекты регулирования, использования и оценки компонентов окружающей природной среды в городских условиях, а также процедура информационного обеспечения эколого-экономической деятельности. Представлены некоторые методологические подходы к формированию системы организационно-экономического управления развитием рационального природопользования в городских условиях, сформулирована процедура моделирования комплексной оценки природохозяйственных объектов с учетом экологических факторов. Представляет интерес для специалистов в области экономики, экологии, природопользования, информатики; основные положения могут использоваться в учебном процессе при подготовке специалистов по землеустройству, кадастрам, городскому хозяйству и информатике.
Second order WSGD operators II: A new family of difference schemes for space fractional advection diffusion equation
Creators: name: Li, Can
name: Deng, Weihua
Publisher: name: arXiv
Year: 2013
Subjects: subject: Numerical Analysis (math.NA)
subject: FOS: Mathematics
subject: 26A33, 65M06, 65M12

description: The second order weighted and shifted Grünwald difference (WSGD) operators are developed in [Tian et al., arXiv:1201.5949] to solve space fractional partial differential equations. Along this direction, we further design a new family of second order WSGD operators; by properly choosing the weighted parameters, they can be effectively used to discretize space (Riemann-Liouville) fractional derivatives. Based on the new second order WSGD operators, we derive a family of difference schemes for the space fractional advection diffusion equation. By von Neumann stability analysis, it is proved that the obtained schemes are unconditionally stable. Finally, extensive numerical experiments are performed to demonstrate the performance of the schemes and confirm the convergent orders.
description: 21 pages, 5 figures
Malacomys edwardsi Rochebrune 1885
Creators: name: Musser, Guy G.
name: Carleton, Michael D.
Publisher: name: Zenodo
Year: 1993
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Muridae
Malacomys
Malacomys edwardsi

description: Malacomys edwardsi Rochebrune, 1885. Bull. Sci. Soc. Philom. Paris, ser. 7, 9:87. TYPE LOCALITY: Liberia (= Rep. of Guinea), Mellacoree (= Melikhoure) River. DISTRIBUTION: Sierra Leone, Guinea, Liberia, and southern regions of Ivory Coast, Ghana, and Nigeria. COMMENTS: Part of the murine fauna endemic to West Africa (see account of Grammomys buntingi). Chromosomal data reported by Matthey (1958) and Van der Straeten and Verheyen (1979b).
description: Published as part of Guy G. Musser & Michael D. Carleton, 1993, Order Rodentia - Family Muridae, pp. 501-755 in Mammal Species of the World (2 nd Edition), Washington and London :Smithsonian Institution Press on page 607, DOI: 10.5281/zenodo.7353098
description: {"references": ["Matthey, R. 1958. Les chromosomes et la position systematique de quelques Murinae africains. Acta Tropica, 15: 97 - 117.", "Van der Straeten, E., and W. N. Verheyen. 1979 b. Notes taxonomiques sur les Malacomys de l'Ouest africain avec redescription du patron chromosomique de Malacomys edwardsi (Mammalia, Muridae). Revue de Zoologie Africaine, 93: 10 - 35."]}
Disturbance and Succession an Active Learning Lecture
Creators: name: Juliana, Justin
Publisher: name: QUBES Educational Resources
Year: 2024

description: Learning Objectives: Identify and understand examples of disturbance ---
Provide examples of and know/understand the differences between primary and secondary succession ---
Know how ecologists study succession ---
Understand mechanism of succession as a function of pioneer and climax species ---
Understand how disturbance and succession shape communities, including the intermediate disturbance hypothesis ---
Apply principals of succession and disturbance to landscape level management ---
Boosted objects and jet substructure at the LHC
Creators: name: Altheimer, BOOST2012 participants- A.
name: Arce, A.
name: Asquith, L.
name: Mayes, J. Backus
name: Kuutmann, E. Bergeaas
name: Berger, J.
name: Bjergaard, D.
name: Bryngemark, L.
name: Buckley, A.
name: Butterworth, J.
name: Cacciari, M.
name: Campanelli, M.
name: Carli, T.
name: Chala, M.
name: Chapleau, B.
name: Chen, C.
name: Chou, J. P.
name: Cornelissen, Th.
name: Curtin, D.
name: Dasgupta, M.
name: Davison, A.
name: Dias, F. de Almeida
name: de Cosa, A.
name: de Roeck, A.
name: Debenedetti, C.
name: Doglioni, C.
name: Ellis, S. D.
name: Fassi, F.
name: Ferrando, J.
name: Fleischmann, S.
name: Freytsis, M.
name: Silva, M. L. Gonzalez
name: de la Hoz, S. Gonzalez
name: Guescini, F.
name: Han, Z.
name: Hook, A.
name: Hornig, A.
name: Izaguirre, E.
name: Jankowiak, M.
name: Juknevich, J.
name: Kaci, M.
name: Kar, D.
name: Kasieczka, G.
name: Kogler, R.
name: Larkoski, A.
name: Loch, P.
name: Mateos, D. Lopez
name: Marzani, S.
name: Masetti, L.
name: Mateu, V.
name: Miller, D. W.
name: Mishra, K.
name: Nef, P.
name: Nordstrom, K.
name: Garcia, E. Oliver
name: Penwell, J.
name: Pilot, J.
name: Plehn, T.
name: Rappoccio, S.
name: Rizzi, A.
name: Rodrigo, G.
name: Safonov, A.
name: Salam, G. P.
name: Salt, J.
name: Schaetzel, S.
name: Schioppa, M.
name: Schmidt, A.
name: Scholtz, J.
name: Schwartzman, A.
name: Schwartz, M. D.
name: Segala, M.
name: Son, M.
name: Soyez, G.
name: Spannowsky, M.
name: Stewart, I.
name: Strom, D.
name: Swiatlowski, M.
name: Martinez, V. Sanchez
name: Takeuchi, M.
name: Thaler, J.
name: Thompson, E.
name: Tran, N. V.
name: Vermilion, C.
name: Villaplana, M.
name: Vos, M.
name: Wacker, J.
name: Walsh, J.
Publisher: name: arXiv
Year: 2013
Subjects: subject: High Energy Physics - Experiment (hep-ex)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: This report of the BOOST2012 workshop presents the results of four working groups that studied key aspects of jet substructure. We discuss the potential of the description of jet substructure in first-principle QCD calculations and study the accuracy of state-of-the-art Monte Carlo tools. Experimental limitations of the ability to resolve substructure are evaluated, with a focus on the impact of additional proton proton collisions on jet substructure performance in future LHC operating scenarios. A final section summarizes the lessons learnt during the deployment of substructure analyses in searches for new physics in the production of boosted top quarks.
description: Report of BOOST2012, held at IFIC Valencia, 23$^{rd}$-27$^{th}$ of July 2012
Characterization of the 2D Su-Schrieffer-Heeger Model with Second-Nearest-Neighbor Interactions
Creators: name: van Niekerk, Chani Stella
name: Warmbier, Robert
Publisher: name: arXiv
Year: 2023
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: It is known that a two dimensional dimerized Su-Schrieffer-Heeger model can produce a nontrivial topological phase. It is a simple nearest-neighbor model with either two or four lattice sites in in two dimensions. Su-Schrieffer-Heeger model is easy to analyse but neglects important interaction in physical systems. In this work, an extended version of this model is proposed which includes all possible second nearest neighbor interactions in order to make it more feasible to describe realistic systems. The topological phases and properties of the model are characterized using a polarization invariant. It is further shown that second nearest neighbor interactions can be used to evoke a topological phase transition as well.
description: submitted to physica status solidi (b)
Improving visibility in photoacoustic imaging using dynamic speckle illumination
Creators: name: Gateau, Jérôme
name: Chaigne, Thomas
name: Katz, Ori
name: Gigan, Sylvain
name: Bossy, Emmanuel
Publisher: name: arXiv
Year: 2013
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: In high-frequency photoacoustic imaging with uniform illumination, homogeneous photo-absorbing structures may be invisible because of their large size or limited-view issues. Here we show that, by exploiting dynamic speckle illumination, it is possible to reveal features which are normally invisible with a photoacoustic system comprised of a 20MHz linear ultrasound array. We demonstrate imaging of a 5 mm diameter absorbing cylinder and a 30 micrometer black thread arranged in a complex shape. The hidden structures are directly retrieved from photoacoustic images recorded for different random speckle illuminations of the phantoms by assessing the variation in the value of each pixel over the illumination patterns.
description: 4 pages, 3 figures, Accepted in Optics letters
Additional file 1 of NGS-Integrator: An efficient tool for combining multiple NGS data tracks using minimum Bayes’ factors
Creators: name: Wen, Bronte
name: Jung, Hyun Jun
name: Lihe Chen
name: Saeed, Fahad
name: Knepper, Mark A.
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Statistics
subject: FOS: Mathematics
subject: Information Systems
subject: FOS: Computer and information sciences

description: Additional file 1: Fig. S1. Examples of data integration using NGS-Integrator to identify genomic binding sites for transcription factor SNAIL1-HA in human LS174T colorectal cancer cells. a and b Two replicates of ChIP-Seq data for SNAIL1-HA obtained from GSE127183 were integrated (window size for background noise calculation: 10 kb with 2× median across the window). The NGS-Integrator integrated track (red track) was generated from the two replicates and peaks identified using MACS2 (bdgcallpeak, cutoff > 0.5) was also shown below the NGS-Integrator integrated track (red). All data tracks were displayed on the UCSC Genome Browser with human genome hg19.
Correcting Multi-focus Images via Simple Standard Deviation for Image Fusion
Creators: name: Jassim, Firas A.
Publisher: name: arXiv
Year: 2013
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: Image fusion is one of the recent trends in image registration which is an essential field of image processing. The basic principle of this paper is to fuse multi-focus images using simple statistical standard deviation. Firstly, the simple standard deviation for the k-by-k window inside each of the multi-focus images was computed. The contribution in this paper came from the idea that the focused part inside an image had high details rather than the unfocused part. Hence, the dispersion between pixels inside the focused part is higher than the dispersion inside the unfocused part. Secondly, a simple comparison between the standard deviation for each k-by-k window in the multi-focus images could be computed. The highest standard deviation between all the computed standard deviations for the multi-focus images could be treated as the optimal that is to be placed in the fused image. The experimental visual results show that the proposed method produces very satisfactory results in spite of its simplicity.
Additional file 1 of The use of pasung for people with mental illness: a systematic review and narrative synthesis
Creators: name: Hidayat, Muhamad Taufik
name: Lawn, Sharon
name: Muir-Cochrane, Eimear
name: Oster, Candice
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Science Policy

description: Additional file 1: Table S1. Empirical studies.
Spectral methods for network community detection and graph partitioning
Creators: name: Newman, M. E. J.
Publisher: name: arXiv
Year: 2013
Subjects: subject: Physics and Society (physics.soc-ph)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Social and Information Networks (cs.SI)
subject: Data Analysis, Statistics and Probability (physics.data-an)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: We consider three distinct and well studied problems concerning network structure: community detection by modularity maximization, community detection by statistical inference, and normalized-cut graph partitioning. Each of these problems can be tackled using spectral algorithms that make use of the eigenvectors of matrix representations of the network. We show that with certain choices of the free parameters appearing in these spectral algorithms the algorithms for all three problems are, in fact, identical, and hence that, at least within the spectral approximations used here, there is no difference between the modularity- and inference-based community detection methods, or between either and graph partitioning.
description: 11 pages, 5 figures