cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Study on Anomalous Neutral Triple Gauge Boson Couplings from Dimension-eight Operators at the HL-LHC
Creators: name: Senol, A.
name: Denizli, H.
name: Yilmaz, A.
name: Cakir, I. Turk
name: Cakir, O.
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The anomalous neutral triple gauge boson couplings (aNTGCs) for the Z gamma gamma and Z gamma Z vertices described by dimension-eight operators are examined through the process pp to l^{+}l^{-} gamma at the High-Luminosity Large Hadron Collider (HL-LHC). We performed an analysis on transverse momentum of photon and angular distribution of charged lepton in the final state including detector effects. Sensitivity limits of the C_{\widetilde{B}W}, C_{BB} couplings are obtained at 95 % C.L. to constrain for the range [-1.88: 1.88] TeV^{-4}, [-1.47: 1.47] TeV^{-4} and [-1.14:1.14] TeV^{-4}, [-0.86: 0.86] TeV^{-4} with an integrated luminosity of 300 fb^{-1} and 3000 fb^{-1}, respectively.
Supplementary Methods: Clamping Cortisol and Testosterone Mitigates the Development of Insulin Resistance during Sleep Restriction in Men
Creators: name: Liu, Peter
name: Lawrence-Sidebottom, Darian
name: Piotrowska, Katarzyna
name: Wenyi Zhang
name: Iranmanesh, Ali
name: Auchus, Richard J.
name: Veldhuis, Johannes D.
name: Van Dongen, Hans P.A.
Publisher: name: figshare
Year: 2021
Subjects: Medicine

description: Supplementary methods
Participative research on use of enhanced climate variability information within agribusiness
Creators: name: Brennan, Lisa E.
name: Carberry, Peter S.
name: Hochman, Zvi
name: Brennan, Lisa E.
name: Carberry, Peter S.
name: Hochman, Zvi
Publisher: name: Unknown
Year: 2001
Subjects: Agribusiness
Risk and Uncertainty

description: Climate variability impacts significantly on the agricultural service sector, affecting the operations and policies of agribusiness suppliers, banking and insurance companies. For example, bank lending policy and agribusiness advice was likely affected by recent El Niño drought events. Through consultation with agribusiness suppliers, banks and insurance companies, it is clear that their business operations and policies could benefit substantially from access to enhanced processes for dealing with climate variability. The Agricultural Production Systems Research Unit (APSRU) has demonstrated that farmers can utilise information derived from climate forecasts and simulation models in interpreting past experience, planning and decision making. Variability in production also poses challenges for both input suppliers and firms involved in the value chain from farm to consumer. Bank lending policies, crop insurance policies, product inventories and marketing advice may all be positively influenced through better dealing with climate variability. For example, insurance policies based on the Agricultural Production Systems Simulator (APSIM) model’s objective prediction of yields may potentially reduce claimant disputes and cut legal costs, representing significant savings to industry. Likewise, better prediction of seasonal outlooks using the APSIM model, climate forecasts and fallow water reserves would allow farmers and lenders, such as produce suppliers and banks, to negotiate individually-tailored financial packages. APSRU has recently extended risk management tools developed primarily for farmers to agribusiness to determine whether better targeted and costeffective agribusiness services can be provided for the benefit of agribusiness organisations and Australian farmers. In this paper we report on our experiences and learnings from our action research approach, where APSRU researchers are working alongside agribusiness staff on relevant case studies to identify the opportunities for and to resolve constraints against implementation of improved agribusiness operations based on climate forecasts and use of the APSIM model. Our collaborators represent a mix of agribusiness organisations, including input suppliers, marketers, banks and insurance companies. The case studies involving our collaborators are described and discussed in the paper, along with results of our initial evaluation. The use of climate forecasts and APSIM has generated interest amongst the agribusiness sector. While the costs of conducting this research are high, we conclude that there are good opportunities for these tools to assist agribusiness operations in providing better services to Australian farmers.
Additional file 1 of Blockade of the Arid5a/IL-6/STAT3 axis underlies the anti-inflammatory effect of Rbpjl in acute pancreatitis
Creators: name: Lv, Jiachen
name: Fang, Min
name: Sun, Shijie
name: Wang, Gang
name: Fu, Songbin
name: Sun, Bei
name: Tong, Jinxue
Publisher: name: figshare
Year: 2022
Subjects: subject: Biophysics
subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Physiology
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Additional file 1: Table S1. Sample grouping in the GSE121038 microarray dataset
Transfer Learning-Based Modular Neural Network for Multi-Objective Optimization of Interior Permanent Magnet Synchronous Motors
Creators: name: Chen, Nuo
name: Doppelbauer, Martin
Publisher: name: Institute of Electrical and Electronics Engineers (IEEE)
Year: 2024
Subjects: permanent magnet motor
finite element analysis
modular neural network
transfer learning
multi-objective optimization

description: Finite element analysis is frequently used to optimize the characteristics of interior permanent magnet synchronous motors throughout the design phase. The existing toolchains enable the full automation of simulating and optimizing a reference motor by manipulating the input design parameters within the feasible design space. However, for each motor design, a complete simulation is required, implying a high computational burden and time cost. Moreover, once the input design parameters undergo variations, it becomes necessary to initiate the simulation process from the beginning. The previously obtained simulation results are not helpful for the new task. In this paper, a new method using modular neural networks based on transfer learning (TL) under dimensionally varying input space conditions is presented. By transferring certain parts of the pre-trained neural networks (NNs) of the old task to the new task's NN, the previously learned parameters can be applied as the initial weight for the new network. Finally, the optimization process is completed by combining this approach with multi-objective optimization. The results show that the learning of the new NN is promoted with the help of TL. In addition, highly flexible surrogate models are achieved, enabling accurate prediction capabilities and a fast optimization time of around 12 seconds.
Is Gravity Actually the Curvature of Spacetime?
Creators: name: Bahamonde, Sebastian
name: Faizal, Mir
Publisher: name: arXiv
Year: 2019
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: The Einstein equations, apart from being the classical field equations of General Relativity, are also the classical field equations of two other theories of gravity. As the experimental tests of General Relativity are done using the Einstein equations, we do not really know, if gravity is the curvature of a torsionless spacetime, or torsion of a curvatureless spacetime, or if it occurs due to the non-metricity of a curvatureless and torsionless spacetime. However, as the classical actions of all these theories differ from each other by boundary terms, and the Casimir effect is a boundary effect, we propose that a novel gravitational Casimir effect between superconductors can be used to test which of these theories actually describe gravity.
description: Essay received an honorable mention in the Gravity Research Foundation Essay Competition 2019. 7 pages
Additional file 1: of Clinical ethics dilemmas in a low-income setting - a national survey among physicians in Ethiopia
Creators: name: Miljeteig, Ingrid
name: Frehiwot Defaye
name: Dawit Desalegn
name: Danis, Marion
Publisher: name: figshare
Year: 2019
Subjects: Medicine
Developmental Biology
Science Policy

description: Questionaire (PDF 189 kb)
The thermal energy of a scalar field in a one-dimensional compact space
Creators: name: Elizalde, E.
name: Tort, A. C.
Publisher: name: arXiv
Year: 2002
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: We discuss some controverted aspects of the evaluation of the thermal energy of a scalar field in a one-dimensional compact space. The calculations are carried out using a generalised zeta function approach.
description: 13 pages, LaTeX, no figures
Utilization of Low Nitrogen Barley for Production of Distilling Quality Malt
Creators: name: Black, Kirsty
name: Daute, Martina
name: Tziboula-Clarke, Athina
name: White, Philip J.
name: Iannetta, Pietro P. M.
name: Walker, Graeme
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Plant Biology
subject: 60506 Virology

description: The potential to utilize low nitrogen barley for production of distilling quality malt was studied. This presents an opportunity to reduce the environmental impact of nitrogen fertilizer applications. Malting barley (cv. Octavia) was grown without the application of inorganic nitrogen fertilizer, to produce grain with a relatively low nitrogen concentration (1.16%, dry weight basis). Following micro-malting trials, dextrinizing units (58 DU) obtained from low nitrogen malt were much higher than a typical specification of 45 DU for malt with a conventional nitrogen concentration (<1.5%). A higher soluble nitrogen ratio (SNR) or index of modification (IoM) of 49 indicated greater modification of the low nitrogen barley, resulting in higher extract released into the wort. Additionally, much lower levels of β-glucan were found in low nitrogen malt wort (64 mg/L compared with over 100 mg/L in wort of conventional nitrogen malt). Low nitrogen malt also produced higher predicted spirit yields following wort fermentation and wash distillation. These findings indicate that lower nitrogen concentration barley can be processed without negatively impacting malt quality for distilling applications. The implication of these findings to help realize more environmentally sustainable production of barley for malting and use in distilling is discussed.
Cytherea dispar Loew 1873
Creators: name: Arabyat, Sahar
name: Katbeh-Bader, Ahmad
name: Greathead, David
Publisher: name: Zenodo
Year: 2004
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Bombyliidae
Cytherea
Cytherea dispar

description: Cytherea dispar (Loew, 1873)
Material: Nine specimens: Al Jubayhah 3.V.1992 (1ɗ), 12.V.2002 (1ɗ); Al Mujib, Faqu’a 18.III.2002 (1Ψ); Al Wala 8.IV.2002 (1ɗ); As Sukhnah 28.IV.1974 (2ɗ, 1Ψ); Dayr Alla 19.III.1974 (1ɗ); Yajuz 28.IV.1974 (1ɗ).
Distribution: Palaearctic: Afghanistan, Algeria, Armenia, Azerbaijan, Gruzia, Iran, Jordan, Kyrgyz Republic, Morocco, Tajikistan, Tunisia, Turkey, Turkmenistan, Uzbekistan.
Evenhuis and Greathead (1999) cited this species as recorded from Jordan.
description: Published as part of Arabyat, Sahar, Katbeh-Bader, Ahmad & Greathead, David, 2004, The bee flies (Diptera: Bombyliidae) of Jordan, pp. 1-48 in Zootaxa 654 on pages 24-25, DOI: 10.5281/zenodo.158701
Ground States of Crystalline Caps: Generalized Jellium on Curved Space
Creators: name: Li, Siyu
name: Zandi, Roya
name: Travesset, Alex
name: Grason, Gregory M.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Materials Science (cond-mat.mtrl-sci)
subject: Pattern Formation and Solitons (nlin.PS)
subject: FOS: Physical sciences

description: We study the structure and elastic energy of the ground states of crystalline caps conforming to a spherical surface. These ground states consist of positive disclination defects in structures spanning from flat and weakly curved crystals to closed shells. We compare two different continuum theories and one discrete-lattice approach for the elastic energy of defective caps. We first investigate the transition between defect-free caps to single-disclination ground states and show that it is characterized by continuous symmetry-breaking transition. Further, we show that ground states with icosahedral subgroup symmetries in caps arise across a range of curvatures, even far from the closure point of complete shells. Thus, while superficially similar to other models of 2D `jellium' (e.g. superconducting disks and 2D Wigner crystals), the interplay between the free edge of crystalline caps and the non-Euclidean geometry of its embedding leads to non trivial ground state behaviors, without counterpart in planar jellium models.
description: Main text: 6 pages, 3 figures; Supplemental Information: 9 pages, 8 figures, 1 table (replaced version corrects author listing)
Semiclassical theory of quasiparticles in the superconducting state
Creators: name: Duncan, Kevin P.
name: Gyorffy, Balazs L.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: We have developed a semiclassical approach to solving the Bogoliubov - de Gennes equations for superconductors. It is based on the study of classical orbits governed by an effective Hamiltonian corresponding to the quasiparticles in the superconducting state and includes an account of the Bohr-Sommerfeld quantisation rule, the Maslov index, torus quantisation, topological phases arising from lines of phase singularities (vortices), and semiclassical wave functions for multi-dimensional systems. The method is illustrated by studying the problem of an SNS junction and a single vortex.
description: 74 pages, 19 figures, 3 tables. Submitted to Academic Press for possible publication
Adoption and Diffusion of Biotechnology: rbST in California
Creators: name: Butler, Leslie J.
name: Henriques, Irene
name: Butler, Leslie J.
name: Henriques, Irene
Publisher: name: Unknown
Year: 2001
Subjects: Research and Development/Tech Change/Emerging Technologies

description: The problem of projecting future use patterns of agricultural biotechnology products in order to evaluate their potential for development and commercialization is a challenging proposition for economists. While many have attempted ex ante methods of projecting adoption and diffusion rates, very few have tested their ex ante results after the fact. In this paper, we use the results of a continuous survey of California dairy producers ex post to test the predictions of an ex ante study of adoption of recombinant bovine Somatotropin (rbST) carried out using data 4-7 years prior to the availability of the new technology.
Temperature dependence of magnetic resonance in ferrimagnetic GdFeCo alloys
Creators: name: Okuno, Takaya
name: Kim, Se Kwon
name: Moriyama, Takahiro
name: Kim, Duck-Ho
name: Mizuno, Hayato
name: Ikebuchi, Tetsuya
name: Hirata, Yuushou
name: Yoshikawa, Hiroki
name: Tsukamoto, Arata
name: Kim, Kab-Jin
name: Shiota, Yoichi
name: Lee, Kyung-Jin
name: Ono, Teruo
Publisher: name: arXiv
Year: 2019
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: We provide a macroscopic theory and experimental results for magnetic resonances of antiferromagnetically-coupled ferrimagnets. Our theory, which interpolates the dynamics of antiferromagnets and ferromagnets smoothly, can describe ferrimagnetic resonances across the angular momentum compensation point. We also present experimental results for spin-torque induced ferrimagnetic resonance at several temperatures. The spectral analysis based on our theory reveals that the Gilbert damping parameter, which has been considered to be strongly temperature dependent, is insensitive to temperature. We envision that our work will facilitate further investigation of ferrimagnetic dynamics by providing a theoretical framework suitable for a broad range of temperatures.
description: 16 pages, 4 figures
Autrigoniscus Sánchez-García & Peñalver & Delclòs & Engel 2021, new genus
Creators: name: Sánchez-García, Alba
name: Peñalver, Enrique
name: Delclòs, Xavier
name: Engel, Michael S.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Isopoda
Ligiidae
Autrigoniscus

description: Autrigoniscus, new genus
 TYPE SPECIES: Autrigoniscus resinicola, new species.
 DIAGNOSIS: Male. An oniscidean with the following combination of characters: Body size small (<2 mm), more or less oblong, with pleon much narrower than pereon; dorsal surface moderately convex dorsally, with epimeral plates only moderately prominent, relatively smooth in appearance, covered with small semicircular scales and sparsely arranged, small triangularshaped scale setae. Eyes small but distinct (with at least three ommatidia). Antennule with three articles, distal article shorter than second and bearing a tuft of apical aesthetascs. Antenna rather stout, with flagellum composed of six articles. Pereopods not all alike, of moderate size, armed with elongate, thick, nearly straight spines arranged in a longitudinal row on sternal margin; carpus modified having a large distal process on tergal margin with a row of scales; dactylus simple (i.e., with one claw); dactylar setae unbranched, glabrous, long and slender (i.e., flagellar). First pair of pleopods modified; endopod biarticulate, with proximal article very short, and distal article long and slender, styliform. Uropod moderately elongate, not surpassing length of pleon; protopod rather short and stout, produced inside pleotelson, with endopod and exopod inserted at same level; endopod and exopod conical, exopod much longer and stouter than endopod, each with a terminal tuft of setae. Female. Unknown.
 ETYMOLOGY: The new genus group name is a combination of the pre-Roman tribe Autrigones (who lived in northern Spain near the region of the amber localities along with the Cantabri) and the Greek suffix – iskos, denoting a diminutive. The gender of the name is masculine.
description: Published as part of Sánchez-García, Alba, Peñalver, Enrique, Delclòs, Xavier & Engel, Michael S., 2021, Terrestrial Isopods from Spanish Amber (Crustacea: Oniscidea): Insights into the Cretaceous Soil Biota, pp. 1-32 in American Museum Novitates 2021 (3974) on page 13, DOI: 10.1206/3974.1, http://zenodo.org/record/5356138
Finite-Volume Two-Pion Amplitudes in the I=0 Channel
Creators: name: Lin, C. -J. D.
name: Martinelli, G.
name: Pallante, E.
name: Sachrajda, C. T.
name: Villadoro, G.
Publisher: name: arXiv
Year: 2002
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We perform a calculation in one-loop chiral perturbation theory of the two-pion matrix elements and correlation functions of an I=0 scalar operator, in finite and infinite volumes for both full and quenched QCD. We show that major difficulties arise in the quenched theory due to the lack of unitarity. Similar problems are expected for quenched lattice calculations of $K \to ππ$ amplitudes with $ΔI=1/2$. Our results raise the important question of whether it is consistent to study $K\toππ$ amplitudes beyond leading order in chiral perturbation theory in quenched or partially quenched QCD.
description: Version to appear on Phys. Lett. B, with only very minor and stylistic changes
Impacts of Trade Liberalization on New Zealand’s Agricultural Supply Response: A Counter Factual Analysis
Creators: name: Cagatay, Selim
name: Lattimore, Ralph G.
name: Cagatay, Selim
name: Lattimore, Ralph G.
Publisher: name: Unknown
Year: 2001
Subjects: subject: International Relations/Trade
subject: economic reform
subject: real exchange rate
subject: agricultural supply response

description: Beginning in the mid-1980s New Zealand underwent a comprehensive set of economic reforms, which were notable for their breadth and sequencing. The impacts of policy changes on the real exchange rate (RER) and resulting changes in the agricultural sector and related processing industries were the central issues in evaluating the benefits and the costs of the reforms. In this paper, a counter factual analysis was developed to analyze what would have been the supply response of agricultural industries if the sectoral order, sequence and timing of trade liberalization policies had been different from what actually occurred. In addition, the impact of "early" trade liberalization and a deferred capital market liberalization was also examined. Five structural equations explaining the real exchange rate for exportables (RERx), the agricultural capital stock, the supply of primary and processed agriculture and the total demand for exportable industries were estimated using an error correction model. Dynamic simulations were performed which involved three policy scenarious. The results indicated that both the sequence of trade and capital market liberalization and the sectoral sequence and timing of the liberalization policies were important in terms of increasing the agricultural supply response in the post-reform period.
Additional file 2: of Pharmacological pain relief and fear of childbirth in low risk women; secondary analysis of the RAVEL study
Creators: name: Logtenberg, Sabine
name: Verhoeven, Corine
name: Rengerink, Katrien
name: Sluijs, Anne-Marie
name: Freeman, Liv
name: Schellevis, Franรงois
name: Mol, Ben
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Science Policy

description: Characteristics of women who completed the W-DEQ antepartum and who did request pharmacological pain relief versus who did not. (DOCX 38 kb)
Does time spent preparing food affect consumers’ food choices?
Creators: name: Short, Gianna
name: Peterson, Hikaru
name: Short, Gianna
name: Peterson, Hikaru
Publisher: name: Unknown
Year: 2016
Subjects: subject: Consumer/Household Economics
subject: Demand and Price Analysis
subject: Food Consumption/Nutrition/Food Safety
subject: Consumer demand
subject: demand analysis
subject: food

description: This updated version reflects the actual conference presentation.
Household survey and focus group discussion questionnaires.pdf
Creators: name: Bargul, Joel L.
name: Stephie Mwangi
name: Kidambasi, Kevin
name: Collins Kigen
Publisher: name: figshare
Year: 2021
Subjects: subject: 140201 Agricultural Economics
subject: FOS: Economics and business
subject: 140301 Cross-Sectional Analysis

description: The household and focus group discussion questionnaires were developed to capture data on parents' and secondary school students' views on formal education among pastoral communities in Laisamis, Marsabit County.
Additional file 4: of Chlorophyll fluorescence analysis in diverse rice varieties reveals the positive correlation between the seedlings salt tolerance and photosynthetic efficiency
Creators: name: Tsai, Yu-Chang
name: Kuan-Chuan Chen
name: Tung-Shan Cheng
name: Lee, Chuan
name: Shih-Hung Lin
name: Tung, Chih-Wei
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Space Science
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Plant Biology

description: Table S4. Correlation between chlorophyll florescence parameters and injury score (IS) in the global panel (232 varieties) (DOCX 16 kb)
Heraclitus Sánchez-García & Peñalver & Delclòs & Engel 2021, new genus
Creators: name: Sánchez-García, Alba
name: Peñalver, Enrique
name: Delclòs, Xavier
name: Engel, Michael S.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Isopoda
Trichoniscidae
Heraclitus

description: Heraclitus, new genus
 TYPE SPECIES: Heraclitus helenae, new species.
DIAGNOSIS: Sex unknown. An oniscidean with the following combination of characters: Body size small (<2 mm), more or less oblong, with pleon much narrower than pereon; dorsal surface convex, with epimeral plates only moderately prominent, rough, covered with large semicircular scales and densely crowded prominent triangular-shaped scale setae. Antenna rather stout, with flagellum composed of at least three articles. Pereopods all alike, of moderate size, armed with elongate, thick, nearly straight spines arranged in a longitudinal row on sternal margin; dactylus with two claws, inner claw minute; dactylar setae unbranched, glabrous, long, and slender, distinctly expanded distally. Uropod moderately elongate; protopod long and stout, produced inside pleotelson, with endopod and exopod inserted at same level; exopod styliform, much longer than endopod; endopod conical, with a terminal tuft of setae.
ETYMOLOGY: The genus group name honors the pre-Socratic philosopher Heraclitus of Ephesus (ca. 535–475 B.C.E.), early rationalist, empiricist, and founder of philosophical ontology. We have used the common Latinized form of his Greek name. The gender of the name is masculine.
description: Published as part of Sánchez-García, Alba, Peñalver, Enrique, Delclòs, Xavier & Engel, Michael S., 2021, Terrestrial Isopods from Spanish Amber (Crustacea: Oniscidea): Insights into the Cretaceous Soil Biota, pp. 1-32 in American Museum Novitates 2021 (3974) on page 19, DOI: 10.1206/3974.1, http://zenodo.org/record/5356138
Augmenting adaptive immunity: progress and challenges in the quantitative engineering and analysis of adaptive immune receptor repertoires
Creators: name: Brown, Alex J.
name: Snapkov, Igor
name: Akbar, Rahmad
name: Pavlović, Milena
name: Miho, Enkelejda
name: Sandve, Geir K.
name: Greiff, Victor
Publisher: name: arXiv
Year: 2019
Subjects: subject: Quantitative Methods (q-bio.QM)
subject: Populations and Evolution (q-bio.PE)
subject: FOS: Biological sciences

description: The adaptive immune system is a natural diagnostic and therapeutic. It recognizes threats earlier than clinical symptoms manifest and neutralizes antigen with exquisite specificity. Recognition specificity and broad reactivity is enabled via adaptive B- and T-cell receptors: the immune receptor repertoire. The human immune system, however, is not omnipotent. Our natural defense system sometimes loses the battle to parasites and microbes and even turns against us in the case of cancer, autoimmune and inflammatory disease. A long-standing dream of immunoengineers has been, therefore, to mechanistically understand how the immune system sees, reacts and remembers antigens. Only very recently, experimental and computational methods have achieved sufficient quantitative resolution to start querying and engineering adaptive immunity with great precision. In specific, these innovations have been applied with the greatest fervency and success in immunotherapy, autoimmunity and vaccine design. The work here highlights advances, challenges and future directions of quantitative approaches which seek to advance the fundamental understanding of immunological phenomena, and reverse engineer the immune system to produce auspicious biopharmaceutical drugs and immunodiagnostics. Our review indicates that the merger of fundamental immunology, computational immunology and digital-biotechnology minimizes black box engineering, thereby advancing both immunological knowledge and as well immunoengineering methodologies.
description: 45 pages, 1 table, 1 figure
Cytherea fenestrata Loew 1873
Creators: name: Arabyat, Sahar
name: Katbeh-Bader, Ahmad
name: Greathead, David
Publisher: name: Zenodo
Year: 2004
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Bombyliidae
Cytherea
Cytherea fenestrata

description: Cytherea fenestrata (Loew, 1873)
Material: Nine specimens: Al Jubayhah 13.V.1974 (1Ψ), 23.V.1992 (1Ψ); Amman 15.V.1997 (1ɗ), 16.V.1978 (1Ψ); Dayr Alla 8.IV.1974 (1Ψ); Hummrit As Sahin 21.III.2001 (1ɗ), 21.IV.2000 (1Ψ) (Al Balqa University); Wadi Shu’ayb 14.IV.? (1Ψ); no data (1Ψ).
Distribution: Afrotropical: Yemen. Palaearctic: Egypt, Kuwait, Morocco, Oman, Saudi Arabia, Syria, Tajikistan, Turkey, Turkmenistan, United Arab Emirates, Uzbekistan.
description: Published as part of Arabyat, Sahar, Katbeh-Bader, Ahmad & Greathead, David, 2004, The bee flies (Diptera: Bombyliidae) of Jordan, pp. 1-48 in Zootaxa 654 on page 25, DOI: 10.5281/zenodo.158701
Xizanga Behounek, Han & Kononenko 2012, gen. n.
Creators: name: Behounek, G.
name: Han, H. L.
name: V. S. Kononenko
Publisher: name: Zenodo
Year: 2012
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Noctuidae
Xizanga

description: Genus Xizanga Behounek, Han & Kononenko gen. n.
 Type species: Xizanga mysterica, sp. n. designated here.
 Diagnosis. No genus of the Noctuidae, and Pantheinae in particular, in the Chinese-Himalayan fauna is similar to Xizanga in external and genitalic characters; see description below.
 Description. Adult (Figs. 9, 10, 11). Frons bulged, covered by short scales; eyes rounded, naked, surrounded with “lashes”; ocelli present; antennae of male filiform; proboscis well developed, short; labial palps moderate, not compressed, extending to mid of frons; 3 rd segment of palps small, about two times smaller than 2 nd, pointed; Thorax rather stout, covered with broad scales; hindwing venation with M2 well developed, unlike to other Pantheinae genera arising from the middle of discal cell. Male genitalia (Fig. 12). Uncus short, relatively massive, extended basally, tegumen equal to vinculum, with broad lateral lobes; paratergal sclerites narrow, recurved; juxta moderate, anchor-like; vinculum rather massive with quadrangular saccus; valva short, broad basally, tapering distally and extended apically, costa very strong, heavily sclerotised, extended apically to abrupt tip of valva; basal lobe of sacculus very broad, elongate; clasper positioned longitudinally, as sclerotised plate; harpe missing; ventral margin of valva with distal sclerotised extension (saccular extension); presence of costal and ventral extension forms bifurcated ending of valva. Aedeagus straight, slightly curved basally; carina with scobinated ring-like band and strong, claw-like subbasal cornutus; vesica tubular, long, not armed. Female genitalia (Fig. 19). Ovipositor rather small; papillae anales quadrangular, covered with hairs; apophyses anteriores and posteriores short, equal in length; antrum funnel-like, with two lateral lobes with twin cut in centre; ductus bursae short, rounded, sclerotised; corpus bursae membranous, narrow, tube-like, extended to pyriform bottom part.
 Etymology. The generic name Xizanga refers to the type locality of the type-species, Xizang province of China (Tibet).
 Notes. The systematic position of this genus is unclear. We did not find any genus related to the new one among Pantheinae and other subfamilies of the “lower trifinae”. We tentatively place the new genus in Pantheinae due to the quadrifid venation of the hindwing with developed vein M2, arising from the middle of discal cell, the bulged frons and short proboscis.
description: Published as part of Behounek, G., Han, H. L. & V. S. Kononenko, 2012, Two new genera and three new species of the Pantheinae from East Asia and China (Lepidoptera, Noctuidae). Contribution to revision of Pantheinae VIII, pp. 78-88 in Zootaxa 3587 on page 83
Bounds on the Magnetic Fields in the Radiative Zone of the Sun
Creators: name: Friedland, Alexander
name: Gruzinov, Andrei
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We discuss bounds on the strength of the magnetic fields that could be buried in the radiative zone of the Sun. The field profiles and decay times are computed for all axisymmetric toroidal Ohmic decay eigenmodes with lifetimes exceeding the age of the Sun. The measurements of the solar oblateness yield a bound
description: 15 pages, 6 figures
Targeted search for young radio pulsars in the SMC: Discovery of two new pulsars
Creators: name: Titus, N.
name: Stappers, B. W.
name: Morello, V.
name: Caleb, M.
name: Filipovic, M. D.
name: McBride, V. A.
name: Ho, W. C. G.
name: Buckley, D. A. H.
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: We report the first rotation powered pulsars discovered in the Small Magellanic Cloud (SMC) in more than a decade. PSR J0043-73 and PSR J0052-72 were discovered during a Parkes Multi-Beam (PMB) survey of MCSNR J0127-7332, and five new, optically selected, supernova remnant (SNR) candidates identified by the XMM Newton survey. In addition to the candidates, we adjusted the PMB rotation to include an additional nine SNRs and pulsar wind nebulae. We searched for young pulsars (1 - 200 ms) employing a Fourier analysis with PRESTO, as well as a search for longer period pulsars (200 ms - 360 s) with a fast folding algorithm. Our targeted survey had a limiting flux density of 0.039 mJy for periods greater than 50 ms. Although not the main target of this search it was also sensitive to millisecond pulsars. PSR J0043-73 has a period and dispersion measure of 937.42937 (26) ms and 115.1 (3.4) pc cm$^{-3}$ respectively, and PSR J0052-72 has a period of 191.444328 (46) ms and a DM of 158.6 (1.6) pc cm$^{-3}$.
Fusion rules of modular invariants
Creators: name: Evans, David E
Publisher: name: arXiv
Year: 2002
Subjects: subject: Operator Algebras (math.OA)
subject: High Energy Physics - Theory (hep-th)
subject: Mathematical Physics (math-ph)
subject: FOS: Mathematics
subject: FOS: Physical sciences

description: Modular invariants satisfy remarkable fusion rules. Let $Z$ be a modular invariant associated to a braided subfactor $N\subset M$. The decomposition of the non-normalized modular invariants $Z Z^{*}$ and $Z^{*}Z$ into sums of normalized modular invariants is related to the decomposition of the full induced $M-M$ system of sectors.
description: 23 pages
Supplementary Methods from Natal origin of Namibian grey whale implies new distance record for in-water migration
Creators: name: A. Rus Hoezel
name: Sarigol, Fatih
name: Gridley, Tess
name: Elwen, Simon H.
Publisher: name: The Royal Society
Year: 2021
Subjects: subject: Ecology
subject: FOS: Biological sciences
subject: 60801 Animal Behaviour

description: supplementary methods file
Additional file 1: of RaPID: ultra-fast, powerful, and accurate detection of segments identical by descent (IBD) in biobank-scale cohorts
Creators: name: Naseri, Ardalan
name: Liu, Xiaoming
name: Tang, Kecong
name: Zhang, Shaojie
name: Zhi, Degui
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Information Systems not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology

description: Supplementary Figures S1â S9. (PDF 1307 kb)
Sustainability Test of Iran’s Agricultural Balance Trade
Creators: name: Komroudi, Mohsen Salehi
name: Pishbahar, Esmaeil
name: Radeli, Hossein
name: Komroudi, Mohsen Salehi
name: Pishbahar, Esmaeil
name: Radeli, Hossein
Publisher: name: Unknown
Year: 2014
Subjects: subject: Agricultural and Food Policy
subject: International Relations/Trade
subject: Production Economics
subject: Agricultural Sector
subject: Arize Model
subject: Balance Trade
subject: Husted Model
subject: Sustainability

description: From the perspective of new growth models and new international trade theories, both exports and imports play an important role in a dynamic economy. Economically, we cannot merely emphasize on a positive trade balance and we ignore the benefits of imports, and also we cannot advise negative trade balance. But the main concern of policy makers about international trade should be making stability and equilibrium of trade balance in the long run. Especially, deficit agricultural trade balance can be a great danger for food security. Hence, the main objective of this study was to test the sustainability of Iran's agricultural trade balance during the period 1961-2011 (1340-1390). For this purpose, After confirming the existence of cointegration by Gregory-Hansen Test, Hasted and Arize models was estimated with OLS, FMOLS and DOLS methods and it released we can verify sustainability of agricultural trade balance during the period of the study. Also, the estimation of error correction model showed that there is a bidirectional causality relationship between import and export in long-run while in short-run export only cause import in agriculture sector.
MOESM5 of Impact of snus use in teenage boys on tobacco use in young adulthood; a cohort from the HUNT Study Norway
Creators: name: Grøtvedt, Liv
name: Forsén, Lisa
name: Ariansen, Inger
name: Graff-Iversen, Sidsel
name: Holmen, Turid Lingaas
Publisher: name: figshare
Year: 2019
Subjects: subject: Physiology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy

description: Additional file 5. Daily smoking and snus use in Norway 1995–2010. Men and women 16–24 years. (DOCX 16 kb)
Xizanga mysterica Behounek, Han & Kononenko 2012, sp.n.
Creators: name: Behounek, G.
name: Han, H. L.
name: V. S. Kononenko
Publisher: name: Zenodo
Year: 2012
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Noctuidae
Xizanga
Xizanga mysterica

description: Xizanga mysterica Behounek, Han & Kononenko sp.n.
 (Figs. 9 – 11, 12, 19)
 Material examined. Holotype: male, China, Aut. Reg. Xizang, Linzhi 80 km to Motuo 24.viii.2011 (Z.H. Pan). Paratypes: 2 females with same label, genit. prep. HHL-2449-2; 1 male, China, Aut. Reg. Xizang, Hanmi-Motuo, 2100m, 18 – 27.viii.2005 (Huang, Zhou, Tang), genit. prep. HHL-1056-1.
 Diagnosis. The species can be easily recognized by the characteristic wing pattern with brown with and green antemedial field, distinct white antemedial line, and distinct orbicular; dark-brown outer part of medial field and characteristic shape of subterminal line, which is angled by straight angle in costal and medial parts. No species of the Noctuidae of Chinese-Himalayan fauna is similar to X. mysterica.
 Description. Adult (Figs. 9 – 11). Wingspan 32 – 34 mm. 2nd segment of labial palps white with black central part; frons covered with short white and black scales; scapus distinct, covered with white scales; patagia and tegulae covered with broad grey scales; ground colour of forewing brownish-grey, wing pattern formed by brown fields and brownish-black lines; basal field pale grey; subbasal field brown, with intrusion of greenish and black scales in costal medial areas; antemedial fascia broad, formed by brown inner line and thin black outer line, white in centre; outer line V-like angled inwardly in angle of discal cell and forms isolated white spot; Orbicular distinct, with thin black surrounding, white and brown inside; medial field greyish-brown, darker outwardly, with three thin dark-brown lines and black sharp medial shadow; postmedial area pale brownish-grey with brown patches; reniform indistinct, marked by grey and brownish; postmedial fascia twin, formed by thin black lines, white inside, started in costal area from two black streaks, follows along vein R 2 in costal area, curved by straight angle, follows down, on vein M2 curved inwardly by almost straight angle again and follows down; subterminal and terminal fields brownish, separated by wide diffuse subterminal line; terminal line as row of dark-brown streaks; cilia greyish-brown. Hindwing pale greyish-brown, with distinct slightly diffused discal spot, medial line and terminal band; cilia pale, greyish-brown. Male genitalia and female genitalia (Figs. 12, 19) features placed on genus Xizanga description chapter.
 Etymology. The species name mysterica indicates the enigmatic systematic position of the species.
 Distribution. (Map 23). Southwest China (Xizang), known only from the type-locality.
description: Published as part of Behounek, G., Han, H. L. & V. S. Kononenko, 2012, Two new genera and three new species of the Pantheinae from East Asia and China (Lepidoptera, Noctuidae). Contribution to revision of Pantheinae VIII, pp. 78-88 in Zootaxa 3587 on pages 83-88
Generalized enrichment of categories
Creators: name: Leinster, Tom
Publisher: name: arXiv
Year: 2002
Subjects: subject: Category Theory (math.CT)
subject: FOS: Mathematics
subject: 18D20, 18D05, 18D50, 18D10

description: We define the phrase `category enriched in an fc-multicategory' and explore some examples. An fc-multicategory is a very general kind of 2-dimensional structure, special cases of which are double categories, bicategories, monoidal categories and ordinary multicategories. Enrichment in an fc-multicategory extends the (more or less well-known) theories of enrichment in a monoidal category, in a bicategory, and in a multicategory. Moreover, fc-multicategories provide a natural setting for the bimodules construction, traditionally performed on suitably cocomplete bicategories. Although this paper is elementary and self-contained, we also explain why, from one point of view, fc-multicategories are the natural structures in which to enrich categories.
description: 18 pages; written 1999
Cytherea nucleorum Becker 1902
Creators: name: Arabyat, Sahar
name: Katbeh-Bader, Ahmad
name: Greathead, David
Publisher: name: Zenodo
Year: 2004
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Bombyliidae
Cytherea
Cytherea nucleorum

description: Cytherea nucleorum (Becker, 1902)
Material: Five specimens: Al Mujib Natural Reserve 13.III.2002 (4ɗ); Dayr Alla 19.III.1974 (1Ψ).
Distribution: Palaearctic: Egypt, Jordan, Kuwait, Libya, Palestine, Saudi Arabia, Syria.
It was collected from the ground surface. Evenhuis and Greathead (1999) cited this species as recorded from Jordan.
description: Published as part of Arabyat, Sahar, Katbeh-Bader, Ahmad & Greathead, David, 2004, The bee flies (Diptera: Bombyliidae) of Jordan, pp. 1-48 in Zootaxa 654 on page 25, DOI: 10.5281/zenodo.158701
Minimal Scenarios for Leptogenesis and CP Violation
Creators: name: Branco, G. C.
name: Felipe, R. Gonzalez
name: Joaquim, F. R.
name: Masina, I.
name: Rebelo, M. N.
name: Savoy, C. A.
Publisher: name: arXiv
Year: 2002
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The relation between leptogenesis and CP violation at low energies is analyzed in detail in the framework of the minimal seesaw mechanism. Working, without loss of generality, in a weak basis where both the charged lepton and the right-handed Majorana mass matrices are diagonal and real, we consider a convenient generic parametrization of the Dirac neutrino Yukawa coupling matrix and identify the necessary condition which has to be satisfied in order to establish a direct link between leptogenesis and CP violation at low energies. In the context of the LMA solution of the solar neutrino problem, we present minimal scenarios which allow for the full determination of the cosmological baryon asymmetry and the strength of CP violation in neutrino oscillations. Some specific realizations of these minimal scenarios are considered. The question of the relative sign between the baryon asymmetry and CP violation at low energies is also discussed.
description: 36 pages, 5 figures; minor corrections and references updated. Final version to appear in Phys. Rev. D
Additional file 1: of Chlorophyll fluorescence analysis in diverse rice varieties reveals the positive correlation between the seedlings salt tolerance and photosynthetic efficiency
Creators: name: Tsai, Yu-Chang
name: Kuan-Chuan Chen
name: Tung-Shan Cheng
name: Lee, Chuan
name: Shih-Hung Lin
name: Tung, Chih-Wei
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: Plant Biology

description: Table S1. Phenotypic evaluation to score the visual symptoms of salt toxicity at the seedling stage (DOCX 14 kb)
Averting Disaster : The Effects of Root Branching on Landslide Debris
Creators: name: Jackman, Andrea
name: Goel, Ria
Publisher: name: The University of British Columbia
Year: 2021

description: After observing the negative effects of landslides in British Columbia, we wanted to explore effective mitigation techniques using plant roots. In this study, we investigated the effects of root branching on the amount of fallen soil in a landslide using a physical model. The goal was to determine the optimal level of branching for artificial and natural landslide mitigation. We predicted an inverse linear relationship between the amount of fallen soil and degree of model root branching as root branching increased. We measured the mass of fallen soil in slopes with four artificial root structures inserted into them. The treatment groups were roots with zero to four bends, higher numbers representing greater root branching. We found statistically significant differences between all treatment groups and an exponential correlation with R2 of 0.98, showing that as the branching of the roots increased, the mass of fallen soil decreased exponentially. We also measured the number of plant root structures that fell in each treatment group and found that fewer plants were uprooted as branching increased. We concluded that more branched structures are correlated with less fallen mass. If larger-scale branched structures are applied to slopes, we believe they will benefit landslide mitigation.