cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Assessment of watermelon production, marketing and consumption in the Central Rift Valley areas of Ethiopia
Creators: name: Tegen, Habtamu
name: Alemayehu, Melkamu
name: Alemayehu, Getachew
name: Abate, Ermias
name: Amare, Tadele
Publisher: name: Journal of Agriculture and Environmental Sciences
Year: 2024

description: Although the Central Rift Valley areas of Ethiopia are the dominant watermelon production, there is limited information on its production practices, market values and consumption. Hence,  documenting the existing watermelon production experience is necessary to adopt watermelon farming in the new potential areas of the country including the Amhara region. Therefore, a survey using semi-structured questionnaires was performed to assess the production practices, market values, and consumption of watermelon in the Bora and Lumme districts of the Awash River basin in 2019. From 133, 47, and 147 questionnaires of producers, wholesalers/retailers, and consumers, 102, 43 and 137, respectively were valid to generate information. According to the responses, most watermelon has been produced under a receding farming system compared to irrigation and rain-fed conditions. Farmers allocate up to 5 ha farm size for watermelon production which implies watermelon farming in the areas is substantial. Farmers have gained a gross benefit of 30,000-400,000 ETB ha-1 with a productivity of 16 to 40 t ha-1. Farmers implemented diverse agronomic practices such as spacing, seed and fertilizer rates, pesticide application, methods and frequency of irrigation. Such diverse agronomic practices in turn results in variations in yield and economic returns among farmers. Shortage of agricultural input, improper agronomic practices, lack of extension services, and market linkage were identified as major constraints of watermelon production in the survey areas. On the other hand, the availability of ample water sources, low capital investment, high demand for watermelon in the market, the proximity of the areas to central and roadside markets and relatively longer shelf-life of the fruit compared to other fresh fruits and vegetables were the major opportunities for the production of watermelon in the area. The return generated from watermelon marketing was considerable for women who were dominantly involving in the marketing segment. There was good experience for watermelon consumption in the survey areas which indicates the due attention of the society to the nutritional and health benefits of the crop.  Generally, the high price and bulkiness of the fruit negatively affect the extent of marketing and consumption. The study confirmed that optimization of proper agronomic practices such as planting density, nutrient management, integrated pest management and close involvement of stakeholders throughout the value chain is vital to exploit the potential benefit of watermelon thereby improving the livelihoods of the smallholder farmers in the study area and other areas where watermelon production is emerging.
description: Journal of Agriculture and Environmental Sciences, Vol. 9 No. 1 (2024)
Effect of stocking density on the physico-chemical characteristics of pond water and survival rate of Nile tilapia (Oreochromis niloticus) fish in Bahir Dar, Ethiopia
Creators: name: Mulugeta, Haimanot
name: Yalew, Alayu
name: Tilahun, Gashaw
name: Melaku, Adane
Publisher: name: Journal of Agriculture and Environmental Sciences
Year: 2024

description: The quality of culture water is an important parameter in fish farming as it is the major factor that affects the survival, growth, reproduction and health of the culture animal. With fish stocking density, the physical and chemical characteristics of pond water changes frequently to the extent that affects the performance of the fish. This study aimed to evaluate the effect of stocking density on the physico-chemical characteristics of pond water and the survival rate of Nile tilapia. The study was conducted at the Fishery Research Center in Bahir Dar, Ethiopia, from February to August 2021. Throughout the culture period, the physical water quality parameters of each treatment were recorded twice a day and the measurements of fish growth and chemical parameters of pond water were taken every month. Data recorded during the experimental period was analyzed using Microsoft Excel and the variation between the different means was compared using the SAS software version 9.4. The result of this experiment indicated the existence of significant differences in most water quality parameters at different densities of fish stocking. There was also a difference in the survival of the experimental fishes between treatments. However, the difference in fish survival was not significant and there was no problem on the welfare of fishes. Temperature, dissolved oxygen (DO), pH, conductivity, and salinity ranged between 22.07 °C to 29.43 °C, 3 mg/L to 8.15 mg/L, 6.4 to 10.39, 178 µS/cm to 241µS/cm, and 0.035 psu to 0.12 psu respectively. Secchi depth and chlorophyll-a (Chl-a) ranged between 22 cm to 39 cm and 0.0153µg/L and 0.0513 µg/L respectively. The differences in DO, pH, conductivity, secchi depth, and chl-a between treatments were significant with stocking density (p < 0.05). The variation in the level of ammonia was highly significant (p < 0.001) between treatments and water quality deteriorated with density. However, the mean ranges of Physico-chemical water quality parameters were at the recommended range for tilapia culture and hence the survival rate of O niloticus at different stocking densities was higher. For the sake of getting higher production per unit area, it is recommended to stock 7 fishes/m2.
description: Journal of Agriculture and Environmental Sciences, Vol. 9 No. 1 (2024)
Additional file 2: Table S1. of Ecogenomic survey of plant viruses infecting Tobacco by Next generation sequencing
Creators: name: Ibukun Akinyemi
name: Wang, Fang
name: Benguo Zhou
name: Shuishui Qi
name: Qingfa Wu
Publisher: name: Figshare
Year: 2016
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology

description: Primer sets used in this study for RT-PCR to bridge the gaps between the assembled contigs of each isolates. Table S2. Strain, accession numbers and origin of reported Cucumber mosaic virus isolates used for phylogenetic comparison of sequence in this study. Table S3. Strain, accession numbers and origin of reported Potato virus Y isolates used for phylogenetic comparison of sequence in this study. Table S4. Strain, accession numbers and origin of reported TMV isolates retrieved from Genbank used for phylogenetic comparison and recombination analysis of sequence in this study. (DOCX 25Â kb)
Additional file 2: Figure S1. of Genome-wide SSR-based association mapping for fiber quality in nation-wide upland cotton inbreed cultivars in China
Creators: name: Xinhui Nie
name: Huang, Cong
name: Chunyuan You
name: Li, Wu
name: Wenxia Zhao
name: Shen, Chao
name: Beibei Zhang
name: Hantao Wang
name: Zhenhua Yan
name: Baoshen Dai
name: Maojun Wang
name: Xianlong Zhang
name: Zhongxu Lin
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Plant Biology

description: Clustering analysis tree of 503â  G. hirsutum cultivars based on Jaccardâ  s similarity coefficients by SSRs. (PDF 27Â kb)
Additional file 1: of “Overconfidence” versus “helplessness”: A qualitative study on abstinence self-efficacy of drug users in a male compulsory drug detention center in China
Creators: name: Zhang, Yan
name: Feng, Bing
name: Wenxiu Geng
name: Owens, Laurence
name: Juzhe Xi
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy
subject: Computational Biology

description: Interview guidelines. (DOCX 14.6 kb)
Additional file 1: of Notochordal cell conditioned medium (NCCM) regenerates end-stage human osteoarthritic articular chondrocytes and promotes a healthy phenotype
Creators: name: MĂźller, Sebastian
name: Acevedo, Lina
name: Xiaomei Wang
name: M. Karim
name: Matta, Ajay
name: Mehrkens, Arne
name: Schaeren, Stefan
name: Feliciano, Sandra
name: Jakob, Marcel
name: Martin, Ivan
name: Barbero, Andrea
name: W. Erwin
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Physiology
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Supplemental material: antibodies used for western blot analysis. (DOCX 36 kb)
Additional file 1: of Laparoscopy versus laparotomy for the management of early stage cervical cancer
Creators: name: Wang, Yan-Zhou
name: Deng, Li
name: Xu, Hui-Cheng
name: Zhang, Yao
name: Liang, Zhi-Qing
Publisher: name: Figshare
Year: 2015
Subjects: subject: Space Science
subject: Medicine
subject: Molecular Biology
subject: Developmental Biology
subject: Marine Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Computational Biology

description: Appendix 3. Postoperative complications. (DOCX 30 kb)
Sylvilagus (Sylvilagus) cunicularius
Creators: name: Wilson, Don E.
name: Reeder, DeeAnn
Publisher: name: The Johns Hopkins University Press
Year: 2005
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Lagomorpha
Leporidae
Sylvilagus
Sylvilagus cunicularius

description: Sylvilagus (Sylvilagus) cunicularius (Waterhouse 1848)
[Lepus] cunicularius Waterhouse 1848, Nat. Hist. Mamm., 2: 132.
Type Locality: " Mexico." Restricted by Goodwin (1969:125) to "Sacualpan" = Zacualpan.
Vernacular Names: Mexican Cottontail.
Subspecies::
Subspecies Sylvilagus (Sylvilagus) cunicularius subsp. cunicularius Waterhouse 1848
Subspecies Sylvilagus (Sylvilagus) cunicularius subsp. insolitus J. Allen 1890
Distribution: S Sinaloa to E Oaxaca and Veracruz (Mexico).
Conservation: IUCN – Lower Risk (nt).
Discussion: Subgenus Sylvilagus (Gureev, 1964:167). See also S. graysoni.Reviewed by Cervantes et al. (1992, Mammalian Species, 412).
description: Published as part of Wilson, Don E. & Reeder, DeeAnn, 2005, Order Lagomorpha, pp. 185-211 in Mammal Species of the World: a Taxonomic and Geographic Reference (3 rd Edition), Volume 1, Baltimore :The Johns Hopkins University Press on page 209, DOI: 10.5281/zenodo.7316519
Carcass composition and sensory and chemical attributes of beef from local cattle breeds in North-West Amhara Region, Ethiopia
Creators: name: Tegegne, Firew
name: Kebede, Damitie
name: Getaneh, Mezgebu
name: Adimasu, Esubalew
name: Tasew, Asaminew
name: Mekuriaw, Shigdaf
name: Asmare, Bimrew
name: Beyero, Netsanet
name: Melak, Tesfaye
name: Worku, Ashebir
name: Alemu, Tesfaye
name: Tamirat, Habtamu
name: Taye, Mengistie
Publisher: name: Journal of Agriculture and Environmental Sciences
Year: 2024

description: This experiment quantifies the carcass composition and the sensory and chemical attributes of beef from four local cattle breed types in selected districts of North-West Amhara, Ethiopia. Forty matured intact bulls were fattened using two treatment feeds with Diet-1 (60:40), and Diet-2 (70:30) concentrate: roughage ratio of the daily dry matter intake of the animals. Carcass data was collected from the meat of 24 slaughtered animals through direct trait measurements, using panelists, and sample proximate analysis. The GLM of SAS (version 9.0) was used to analyze the data fitting breed and treatment feeds as fixed effects. The overall mean values of Total Leg (30.09±0.50), Total loin (12.19±0.39), Total rack (8.08±0.27), Total breast and shoulder (8.27±0.26),  Total Shoulder and Neck (30.06±0.78) were significantly (P<0.05) affected by the breed type that cattle from Yilmana Desna area performed the best. Besides, meat quality traits of juiciness, tenderness, and overall acceptability (P<0.05), were best for Denbecha cattle breed types. The overall moisture content of the meat (69.78±0.32) was significantly (p<0.05) different between the breeds. Overall, the examined cattle breed types have acceptable sensory and chemical qualities of meat. Future research should quantify the sensory and chemical qualities of meat from these cattle breeds under different ages, animal physiology (intact and castrated bulls), sex, and dietary supplement levels.
description: Journal of Agriculture and Environmental Sciences, Vol. 9 No. 1 (2024)
Cryopreservation and artificial insemination in African Catfish (Clarias gariepinus, Burchell 1822): A review
Creators: name: Tilahun, Gashaw
name: Yalew, Alayu
Publisher: name: Journal of Agriculture and Environmental Sciences
Year: 2024

description: Despite the high potential for the production of African Catfish, Clarias gariepinus, and its market demand there exists a serious lack of fish fingerlings to supply for producers and (re)stock water bodies. Unlike other species, the traditional method of obtaining C. gariepinus milt is sacrificing the male, removing its testes and macerating over the stripped and collected eggs. This is a loss for a farm as male broodstock is going to be killed every time. The C. gariepinus fish shows seasonal gonadal maturation that is usually associated with the rainy season as the hormonal level increases during this season. Recent efforts are becoming successful in multiplying C. gariepinus artificially by fertilizing the striped eggs with preserved sperm. The preservation of sperm is a means to ensure year-round availability and supply of fingerlings and overcomes the scarcity of seed. Fish sperm can be preserved in dry ice, freezing the semen and storing the frozen semen in liquid nitrogen (cryopreservation). The preservation period of fish male gamete is usually short, compared to mammals due to its biochemical structure and temperature exposure effects on the sperm cells. Hence, the paper focuses on reviewing the efforts so far made on the preservation of male C. gariepinus and the use of the preserved semen for insemination. It also addresses the methods to evaluate the quality of sperm, milt collection and preparation as well as the amount of sperm used to fertilize an egg. The aim of this review is to gather the efforts made so far on the amount of sperm required and parameters considered while evaluating the sperm, cryopreservation and artificial insemination in C. gariepinus and provide the available information for the hatcheries to have an alternative means of getting milt without sacrificing broods in the hatchery. Milt can be collected easily by dissecting the selected and matured testes with scissors, removing the two testes, cutting each testis into smaller pieces and squeezing it in a loosely woven cloth. This milt can, then, be placed in a freezer and the frozen semen can be preserved in liquid nitrogen at a temperature of -196 0C. The ratio of semen to egg in C. gariepinus fish is recommended at 6 to 24x103 semen to an egg.  Cryopreservation of C. gariepinus semen in liquid nitrogen invariably helps to conserve the genetic resources of desirable male fish for future use any time when the females are ready.
description: Journal of Agriculture and Environmental Sciences, Vol. 9 No. 1 (2024)
Sylvilagus (Sylvilagus) cunicularius subsp. cunicularius Waterhouse 1848
Creators: name: Wilson, Don E.
name: Reeder, DeeAnn
Publisher: name: The Johns Hopkins University Press
Year: 2005
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Lagomorpha
Leporidae
Sylvilagus
Sylvilagus cunicularius
Sylvilagus (sylvilagus) cunicularius subsp. cunicularius waterhouse 1848

description: Sylvilagus (Sylvilagus) cunicularius subsp. cunicularius Waterhouse 1848
Sylvilagus (Sylvilagus) cunicularius subsp. cunicularius Waterhouse 1848, Nat. Hist. Mamm., 2: 132.
Type Locality: " Mexico." Restricted by Goodwin (1969:125) to "Sacualpan" = Zacualpan.
Synonyms: Sylvilagus (Sylvilagus) cunicularius subsp. pacificus (Nelson 1904); Sylvilagus (Sylvilagus) cunicularius subsp. verae-crucis (Thomas 1890).
description: Published as part of Wilson, Don E. & Reeder, DeeAnn, 2005, Order Lagomorpha, pp. 185-211 in Mammal Species of the World: a Taxonomic and Geographic Reference (3 rd Edition), Volume 1, Baltimore :The Johns Hopkins University Press on page 209, DOI: 10.5281/zenodo.7316519
Sylvilagus dicei Harris 1932
Creators: name: Wilson, Don E.
name: Reeder, DeeAnn
Publisher: name: The Johns Hopkins University Press
Year: 2005
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Lagomorpha
Leporidae
Sylvilagus
Sylvilagus dicei

description: Sylvilagus dicei Harris 1932
Sylvilagus dicei Harris 1932, Occas. Pap. Mus. Zool., Univ. Michigan, 248: 1.
Type Locality: "El Copey de Dota, in the Cordillera de Talamanca, Costa Rica ... 6000 feet. [1829 m]".
Vernacular Names: Dice's Cottontail.
Distribution: Cordillera de Talamanca (SE Costa Rica, NW Panama).
Conservation: IUCN – Endangered.
Discussion: Subgenus Tapeti? Formerly included in brasiliensis (Hall, 1981:295); revised by Diersing (1981).
description: Published as part of Wilson, Don E. & Reeder, DeeAnn, 2005, Order Lagomorpha, pp. 185-211 in Mammal Species of the World: a Taxonomic and Geographic Reference (3 rd Edition), Volume 1, Baltimore :The Johns Hopkins University Press on page 209, DOI: 10.5281/zenodo.7316519
Sylvilagus (Sylvilagus) floridanus subsp. floridanus J. A. Allen 1890
Creators: name: Wilson, Don E.
name: Reeder, DeeAnn
Publisher: name: The Johns Hopkins University Press
Year: 2005
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Lagomorpha
Leporidae
Sylvilagus
Sylvilagus floridanus
Sylvilagus (sylvilagus) floridanus subsp. floridanus j. a. allen 1890

description: Sylvilagus (Sylvilagus) floridanus subsp. floridanus J. A. Allen 1890
Sylvilagus (Sylvilagus) floridanus subsp. floridanus J. A. Allen 1890, Bull. Am. Mus. Nat. Hist., 3: 160.
Type Locality: "Sebastian River, Brevard Co.," [Florida, USA].
Synonyms: Sylvilagus (Sylvilagus) floridanus subsp. ammophilus Howell 1939; Sylvilagus (Sylvilagus) floridanus subsp. paulsoni Schwartz 1956.
Discussion: Part of a group of subspecies found north of Mexico.
description: Published as part of Wilson, Don E. & Reeder, DeeAnn, 2005, Order Lagomorpha, pp. 185-211 in Mammal Species of the World: a Taxonomic and Geographic Reference (3 rd Edition), Volume 1, Baltimore :The Johns Hopkins University Press on page 209, DOI: 10.5281/zenodo.7316519
Additional file 2: of Systematic drug screening reveals specific vulnerabilities and co-resistance patterns in endocrine-resistant breast cancer
Creators: name: Kangaspeska, Sara
name: Hultsch, Susanne
name: Jaiswal, Alok
name: Edgren, Henrik
name: John-Patrick Mpindi
name: Eldfors, Samuli
name: BrĂźck, Oscar
name: Aittokallio, Tero
name: Kallioniemi, Olli
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Hematology
subject: Plant Biology
subject: Computational Biology

description: Parental cells show sensitivity and selectivity towards known breast cancer drugs according to their subtype. (A) Drug Sensitivity Scores (DSS) of known breast cancer treatment drugs. (B) DSS of drugs specific to luminal A-(left) and luminal B-subtypes (right). Results are extracted from the data on all drugs tested in all cell lines, presented in Additional file 5. The drugs specific to parental luminal A and B subtypes were identified based on their DSS scores. (PDF 423Â kb)
Sylvilagus (Sylvilagus) floridanus subsp. alacer Bangs 1896
Creators: name: Wilson, Don E.
name: Reeder, DeeAnn
Publisher: name: The Johns Hopkins University Press
Year: 2005
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Lagomorpha
Leporidae
Sylvilagus
Sylvilagus floridanus
Sylvilagus (sylvilagus) floridanus subsp. alacer bangs 1896

description: Sylvilagus (Sylvilagus) floridanus subsp. alacer Bangs 1896
Synonyms: Sylvilagus (Sylvilagus) floridanus subsp. mearnsi (J. Allen 1894); Sylvilagus (Sylvilagus) floridanus subsp. similis Nelson 1907.
Discussion: Part of a group of subspecies found north of Mexico.
description: Published as part of Wilson, Don E. & Reeder, DeeAnn, 2005, Order Lagomorpha, pp. 185-211 in Mammal Species of the World: a Taxonomic and Geographic Reference (3 rd Edition), Volume 1, Baltimore :The Johns Hopkins University Press on page 209, DOI: 10.5281/zenodo.7316519
Sylvilagus (Sylvilagus) floridanus subsp. chapmani J. Allen 1899
Creators: name: Wilson, Don E.
name: Reeder, DeeAnn
Publisher: name: The Johns Hopkins University Press
Year: 2005
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Lagomorpha
Leporidae
Sylvilagus
Sylvilagus floridanus
Sylvilagus (sylvilagus) floridanus subsp. chapmani j. allen 1899

description: Sylvilagus (Sylvilagus) floridanus subsp. chapmani J. Allen 1899
Synonyms: Sylvilagus (Sylvilagus) floridanus subsp. caniclunis (Miller 1899); Sylvilagus (Sylvilagus) floridanus subsp. llanensis Blair 1938; Sylvilagus (Sylvilagus) floridanus subsp. simplicicanus (Miller 1902).
Discussion: Part of a group of subspecies found north of Mexico.
description: Published as part of Wilson, Don E. & Reeder, DeeAnn, 2005, Order Lagomorpha, pp. 185-211 in Mammal Species of the World: a Taxonomic and Geographic Reference (3 rd Edition), Volume 1, Baltimore :The Johns Hopkins University Press on page 209, DOI: 10.5281/zenodo.7316519
Additional file 11: of Systematic drug screening reveals specific vulnerabilities and co-resistance patterns in endocrine-resistant breast cancer
Creators: name: Kangaspeska, Sara
name: Hultsch, Susanne
name: Jaiswal, Alok
name: Edgren, Henrik
name: John-Patrick Mpindi
name: Eldfors, Samuli
name: Brück, Oscar
name: Aittokallio, Tero
name: Kallioniemi, Olli
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Hematology
subject: 110309 Infectious Diseases
subject: 60506 Virology
subject: Computational Biology

description: Drug testing and molecular profiling reveal sensitivity and co-resistance networks in MCF-7 Tam1. (A) DSS differences of tamoxifen-resistant MCF-7Tam1 vs parental cells reveal emerging sensitivities (above the dotted line) and co-resistances (below the dotted line) upon acquiring tamoxifen resistance. (B) Color legend of the drug target class. For visualization purposes, the drugs were colored according to their target class as indicated, and the coloring matched with their target genes. (C) Drugs with DSS difference >5. Positive values indicate sensitivity and negative co-resistance. (D) Matching of the drugs that the cells show acquired sensitivity or co-resistance towards with their specific target genes reveals molecular networks behind sensitivity and co-resistance in MCF-7 Tam1. Drugs without target genes in the networks are not displayed. Drug targets (colored) and upstream molecules (uncolored) are denoted as follows: ovals, molecules without genomic changes; rectangles with solid line, molecules with copy number deletions, high confidence (p 30 %) point mutations could not be connected to the network and are thus not displayed. Molecules that are connected with the ER signalling pathway are connected by a dark grey line to the boxed text “Estrogen Receptor Signalling”. (PDF 443 kb)
Additional file 1: of Biological and behavioral factors modify urinary arsenic metabolic profiles in a U.S. population
Creators: name: Hudgens, Edward
name: Drobna, Zuzana
name: He, Bin
name: X. Le
name: Styblo, Miroslav
name: Rogers, John
name: Thomas, David
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified

description: Supplemental Information. (DOCX 512Â kb)
Additional file 3: of Systematic drug screening reveals specific vulnerabilities and co-resistance patterns in endocrine-resistant breast cancer
Creators: name: Kangaspeska, Sara
name: Hultsch, Susanne
name: Jaiswal, Alok
name: Edgren, Henrik
name: John-Patrick Mpindi
name: Eldfors, Samuli
name: BrĂźck, Oscar
name: Aittokallio, Tero
name: Kallioniemi, Olli
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Cancer
subject: Hematology
subject: Plant Biology
subject: 60506 Virology

description: Growth and tamoxifen-tolerance of tamoxifen-resistant cells. (A) CTG-viability measurement of tamoxifen-resistant vs parental cells treated with increasing concentrations of tamoxifen. (B) Measurement of active DNA synthesis by FACS-analysis showing accumulation of resistant cells in the G0/G1 phase of the cell cycle. (PDF 1035Â kb)
Effects of integrated fertilizer application on soil properties and yield of Maize (Zea mays L.) on Nitisols in Pawe District, Northwestern Ethiopia
Creators: name: Getaneh, Seble
name: Molla, Eyayu
name: Abera, Dejene
Publisher: name: Journal of Agriculture and Environmental Sciences
Year: 2024

description: In many parts of Ethiopia, the primary challenge limiting crop productivity is the depletion of soil fertility. Despite being one of Ethiopia's primary cereal crops, the yields of maize are currently believed to be low owing to low soil fertility, continuous farming, and poor crop management. A field experiment was carried out on the Nitisols of Pawe Research Station in northwest Ethiopia during the 2020-21 cropping season to evaluate the effects of the integrated application of farmyard manure (FYM) and inorganic nitrogen fertilizer on soil properties and maize yield. The treatments were a factorial combination of four levels of FYM (0, 5, 10, and 15 t ha-1) and four levels of nitrogen (0, 34.5, 69, and 103.5 kg ha-1) in the form of urea. Besides, 46 kg ha-1 P2O5 fertilizer was applied for all treatments. The experiment was arranged in RCBD with three replications. The result showed that combined applications of FYM and N fertilizer significantly (p < 0.05) improved the soil pH, soil organic carbon, cation exchange capacity, and exchangeable calcium. The combined application of 10 t ha-1 FYM and  69 kg ha-1 N recorded the highest maize grain yield (10,035.8 kg ha-1) and thousand-grain weight (415.97 g), while the interaction of 103.5 kg ha-1 N and 15 t ha-1 FYM produced the highest biomass yield (25.83 t ha-1). The combined application of 10 t ha-1 FYM and 69 kg ha-1N is therefore recommended for economical production (net benefit of 81,258.7 ETB ha-1 and acceptable MRR of 497.96%) of maize and soil fertility improvement in the study area and areas with similar agro-ecology.
description: Journal of Agriculture and Environmental Sciences, Vol. 9 No. 1 (2024)
Sylvilagus (Sylvilagus) floridanus subsp. holzneri Mearns 1896
Creators: name: Wilson, Don E.
name: Reeder, DeeAnn
Publisher: name: The Johns Hopkins University Press
Year: 2005
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Lagomorpha
Leporidae
Sylvilagus
Sylvilagus floridanus
Sylvilagus (sylvilagus) floridanus subsp. holzneri mearns 1896

description: Sylvilagus (Sylvilagus) floridanus subsp. holzneri Mearns 1896
Synonyms: Sylvilagus (Sylvilagus) floridanus subsp. durangae J. Allen 1903; Sylvilagus (Sylvilagus) floridanus subsp. hesperius Hoffmeister and Lee 1963; Sylvilagus (Sylvilagus) floridanus subsp. rigidus (Mearns 1896).
Discussion: Part of a group of subspecies found north of Mexico.
description: Published as part of Wilson, Don E. & Reeder, DeeAnn, 2005, Order Lagomorpha, pp. 185-211 in Mammal Species of the World: a Taxonomic and Geographic Reference (3 rd Edition), Volume 1, Baltimore :The Johns Hopkins University Press on page 209, DOI: 10.5281/zenodo.7316519
Additional file 8: of Systematic drug screening reveals specific vulnerabilities and co-resistance patterns in endocrine-resistant breast cancer
Creators: name: Kangaspeska, Sara
name: Hultsch, Susanne
name: Jaiswal, Alok
name: Edgren, Henrik
name: John-Patrick Mpindi
name: Eldfors, Samuli
name: Brück, Oscar
name: Aittokallio, Tero
name: Kallioniemi, Olli
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Pharmacology
subject: Biotechnology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Hematology
subject: 110309 Infectious Diseases
subject: Plant Biology
subject: 60506 Virology

description: Copy number alterations and point mutations are scattered throughout the genomes of the tamoxifen-resistant cells. (A) Relative copy number of each resistant cell line measured by exome-sequencing and plotted as log2 ratio of resistant vs parental cell line (colored dots). Copy number gains/amplifications and losses/deletions are visible as peaks and valleys in the red segmentation line, respectively. Chromosomes are numbered and highlighted in alternating colors. High confidence point mutations (p 30 %) are depicted above the segmentation line. (B) Venn diagrams show overlap of point mutations (black) and genes altered by CNVs (red) between the tamoxifen-resistant clones derived from same parental cells. (PDF 735 kb)
Comparative assessment of air quality in Epe, and Olusosun dumpsites of Nigeria
Creators: name: Okafor, Chinenye Lilian
name: Chukwu, Felix Sunday
name: Ahove, Michael Adetunji
Publisher: name: Journal of Agriculture and Environmental Sciences
Year: 2024

description: ABSTRACT

A comparative assessment of air quality in Epe and Olusosun dumpsites was carried out with a view to understanding if the historical background of dumpsites had an influence on their perceived impacts on the environment as well as their emission concentrates. Primary data was collected through questionnaire administration and the use of portable emission monitoring instruments. A total of 120 copies of self-designed interview questions were administered for the study but 116 were retrieved from both dumpsites and considered valid for the analysis. On the other hand, data collection with a portable air quality monitor was carried out during the month of October 2022. Sampling was done between 10 am and 1 pm. A 60-minute exposure time was observed with each of the instruments (AEROQUAL 500 Series) to measure Carbon dioxide (CO2), Methane (CH4), Oxides of nitrogen (NOx), Sulfur dioxide (SO2) and Carbon monoxide (CO) and sizes of suspended particulate matter (PM2.5 and PM10.0) were measured using handheld particulate matter monitoring equipment (AEROCET 531S by Met One Instruments). Within this time belt, the readings were taken three (3) times and averaged to get a value for the time belt using descriptive statistics. The result indicated high concentrations of CO2, CH4 and PM during the early hours of the day and gradually decreased as the day went by at both dumpsites. The concentration of SO2 was higher at Olusosun dumpsite on day 5 when temperature and relative humidity were high from 12 noon. NOx was detected at both dumpsites at a minimal concentration. In conclusion, higher concentration levels recorded in all analysed gas samples collected from the Olusosun upland dumpsite suggested that the only historical component that could have influenced the dumpsite was “the age of dumpsite” since it is way older than the Epe wetland dumpsite. The topographical nature of the dumpsites (upland and wetland) appears not to have an impact on the air quality values measured. The perception of residents in both dumpsites showed that they were concerned about living and carrying out daily operations in and around the dumpsites.
description: Journal of Agriculture and Environmental Sciences, Vol. 9 No. 1 (2024)
Additional file 4: of Systematic drug screening reveals specific vulnerabilities and co-resistance patterns in endocrine-resistant breast cancer
Creators: name: Kangaspeska, Sara
name: Hultsch, Susanne
name: Jaiswal, Alok
name: Edgren, Henrik
name: John-Patrick Mpindi
name: Eldfors, Samuli
name: Brück, Oscar
name: Aittokallio, Tero
name: Kallioniemi, Olli
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Hematology
subject: 110309 Infectious Diseases
subject: Plant Biology

description: Estrogen responsivity of ERα-mediated transcription in the tamoxifen-resistant cells. (A) Quantitative RT-PCR showing decreased ERα target gene expression in the resistant cells. (B) Quantitative RT-PCR of the ERα target gene pS2 expression upon estradiol withdrawal and subsequent addition of estradiol back to the cells. (C) Western blotting displaying altered protein levels of ERα in the resistant cells. A.u. = arbitrary units, E2 = 17β-estradiol. Error bars show standard deviation. (PDF 704 kb)
Additional file 12: of Systematic drug screening reveals specific vulnerabilities and co-resistance patterns in endocrine-resistant breast cancer
Creators: name: Kangaspeska, Sara
name: Hultsch, Susanne
name: Jaiswal, Alok
name: Edgren, Henrik
name: John-Patrick Mpindi
name: Eldfors, Samuli
name: Brück, Oscar
name: Aittokallio, Tero
name: Kallioniemi, Olli
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Hematology
subject: 110309 Infectious Diseases
subject: Plant Biology
subject: 60506 Virology
subject: Computational Biology

description: Drug testing and molecular profiling reveal sensitivity and co-resistance networks in ZR-75-1 Tam1 and Tam2. (left) DSS differences of tamoxifen-resistant (A) ZR-75-1 Tam1 and (B) ZR-75-1 Tam2 vs parental cells reveal emerging sensitivities (above the dotted line) and co-resistances (below the dotted line) upon acquiring tamoxifen resistance. (middle) Drugs with DSS difference >5. Positive values indicate sensitivity and negative co-resistance. (right) Matching of the drugs that the cells show acquired sensitivity or co-resistance towards with their specific target genes reveals molecular networks behind sensitivity and co-resistance in resistant cells. Drugs without target genes in the networks are not displayed. Drug targets (colored) and upstream molecules (uncolored) are denoted as follows: ovals, molecules without genomic changes; rectangles with dashed line, molecules with copy number gain, high confidence (p 30 %) point mutations could not be connected to the network and are thus not displayed. (B) Color legend of the drug target class. For visualization purposes, the drugs were colored according to their target class as indicated, and the coloring matched with their target genes. Molecules that are connected with the ER signalling pathway are connected by a dark grey line to the boxed text “Estrogen Receptor Signalling”. (PDF 464 kb)
Additional file 1: Table S1. of Genetic structure of Mount Huang honey bee (Apis cerana) populations: evidence from microsatellite polymorphism
Creators: name: Liu, Fang
name: Tengfei Shi
name: Sisi Huang
name: Linsheng Yu
name: Shoudong Bi
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Allele frequencies, proportion of observed (Ho) and expected (He) heterozygosity of 16 microsatellites loci across seven populations of Mount Huangshan A. cerana, n is the number of individual bees examined. (DOC 218 kb)
MOESM1 of A multicenter, retrospective epidemiologic survey of the clinical features and management of bone metastatic disease in China
Creators: name: Yunpeng Yang
name: Yuxiang Ma
name: Sheng, Jin
name: Huang, Yan
name: Yuanyuan Zhao
name: Wenfeng Fang
name: Shaodong Hong
name: Tian, Ying
name: Xue, Cong
name: Zhang, Li
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer
subject: Hematology

description: Additional file 1. Questionnaire for survey of the clinical features and management of bone metastatic disease in China.
Sylvilagus (Sylvilagus) floridanus subsp. mallurus Thomas 1898
Creators: name: Wilson, Don E.
name: Reeder, DeeAnn
Publisher: name: The Johns Hopkins University Press
Year: 2005
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Lagomorpha
Leporidae
Sylvilagus
Sylvilagus floridanus
Sylvilagus (sylvilagus) floridanus subsp. mallurus thomas 1898

description: Sylvilagus (Sylvilagus) floridanus subsp. mallurus Thomas 1898
Synonyms: Sylvilagus (Sylvilagus) floridanus subsp. hitchensi Mearns 1911; Sylvilagus (Sylvilagus) floridanus subsp. sylvaticus (Bachman 1837).
Discussion: Part of a group of subspecies found north of Mexico.
description: Published as part of Wilson, Don E. & Reeder, DeeAnn, 2005, Order Lagomorpha, pp. 185-211 in Mammal Species of the World: a Taxonomic and Geographic Reference (3 rd Edition), Volume 1, Baltimore :The Johns Hopkins University Press on page 209, DOI: 10.5281/zenodo.7316519
Sylvilagus (Sylvilagus) floridanus subsp. aztecus J. Allen 1890
Creators: name: Wilson, Don E.
name: Reeder, DeeAnn
Publisher: name: The Johns Hopkins University Press
Year: 2005
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Lagomorpha
Leporidae
Sylvilagus
Sylvilagus floridanus
Sylvilagus (sylvilagus) floridanus subsp. aztecus j. allen 1890

description: Sylvilagus (Sylvilagus) floridanus subsp. aztecus J. Allen 1890
Synonyms: Sylvilagus (Sylvilagus) floridanus subsp. chiapensis (Nelson 1904).
Discussion: Part of a group of subspecies found in Mexico and Central America.
description: Published as part of Wilson, Don E. & Reeder, DeeAnn, 2005, Order Lagomorpha, pp. 185-211 in Mammal Species of the World: a Taxonomic and Geographic Reference (3 rd Edition), Volume 1, Baltimore :The Johns Hopkins University Press on page 209, DOI: 10.5281/zenodo.7316519
Wege und Strassen
Creators: name: Leuthold, Theo
name: Schiedt, Hans-Ulrich
name: Jucker-Joos, Stefan
name: Burch, Hans
name: Bürge, Norbert
name: Caflisch, Albert
name: Frei, James J.
name: Sidler, Marianne
Publisher: name: Gemeinde Horgen
Year: 2014
Subjects: subject: 388 Verkehr; Landverkehr
subject: 710 Städtebau, Raumplanung, Landschaftsgestaltung
subject: 949 Geschichte anderer Teile Europas
subject: Horgen
subject: Heimatkunde
subject: Weg
subject: Straße

description: Enthält eine Chronik der Gemeinde Horgen für 2013
ЗАМАНАУИ БАҚ ЖӘНЕ ТІЛ НОРМАЛАРЫНЫҢ САҚТАЛУЫ
Creators: name: Болатова Гүлжауһар Жамбыл қызы
Publisher: name: Zenodo
Year: 2023

description: Бұқаралық ақпарат құралдары (БАҚ, ағылш. Mass media) — арнайы техникалық құралдардың көмегімен, кез келген тұлғаларға әртүрлі мәліметтерді ашық жариялауға арналған әлеуметтік мекемелер. Сарапшылар олардың мынадай ерекше белгілерін атап көрсетеді: жариялылық, яғни тұтынушылардың шексіздігі; арнайы техникалық құралдардың, аппара-туралардың болуы;ақпарат таратушының (коммутатор) қабылдаушыға біржақты ықпалы; тұтынушы аудиторияның тұрақсыз әркелкілігі.
Additional file 10: Figure S7. of Glucocorticoid receptor and nuclear factor kappa-b affect three-dimensional chromatin organization
Creators: name: Kuznetsova, Tatyana
name: Wang, Shuang-Yin
name: Nagesha Rao
name: Mandoli, Amit
name: Martens, Joost
name: Rother, Nils
name: Aartse, Aafke
name: Laszlo Groh
name: Janssen-Megens, Eva
name: Guoliang Li
name: Yijun Ruan
name: Logie, Colin
name: Stunnenberg, Hendrik
Publisher: name: Figshare
Year: 2015
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Reproducibility of 4C-seq biological replicates at the FKBP5 locus. (PDF 1094 kb)
Sylvilagus (Sylvilagus) floridanus subsp. connectens Nelson 1904
Creators: name: Wilson, Don E.
name: Reeder, DeeAnn
Publisher: name: The Johns Hopkins University Press
Year: 2005
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Lagomorpha
Leporidae
Sylvilagus
Sylvilagus floridanus
Sylvilagus (sylvilagus) floridanus subsp. connectens nelson 1904

description: Sylvilagus (Sylvilagus) floridanus subsp. connectens Nelson 1904
Synonyms: Sylvilagus (Sylvilagus) floridanus subsp. russatus (J. Allen 1904).
Discussion: Part of a group of subspecies found in Mexico and Central America.
description: Published as part of Wilson, Don E. & Reeder, DeeAnn, 2005, Order Lagomorpha, pp. 185-211 in Mammal Species of the World: a Taxonomic and Geographic Reference (3 rd Edition), Volume 1, Baltimore :The Johns Hopkins University Press on page 209, DOI: 10.5281/zenodo.7316519
Additional file 5: Figure S5. of Glucocorticoid receptor and nuclear factor kappa-b affect three-dimensional chromatin organization
Creators: name: Kuznetsova, Tatyana
name: Wang, Shuang-Yin
name: Nagesha Rao
name: Mandoli, Amit
name: Martens, Joost
name: Rother, Nils
name: Aartse, Aafke
name: Laszlo Groh
name: Janssen-Megens, Eva
name: Guoliang Li
name: Yijun Ruan
name: Logie, Colin
name: Stunnenberg, Hendrik
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Physiology
subject: Pharmacology
subject: Biotechnology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Co-activation of GR and p65 induces additional de novo P300 DBSs. (A) Pile-up heat map depicting signal of P300, GR, and p65 at three groups (p65 dependent, GR dependent, and co-stimulation dependent) of inducible P300 DBSs that were identified upon co-activation of GR and p65. Motif occurrence (%) at all three clusters of induced P300 DBSs (bar graphs). (B) H3K27ac, DNase I accessibility, and H3K4me1 signal at all induced P300 DBSs upon vehicle (DMSO) and co-treatments (TA + TNFα). (C) H3K27ac, DNase I accessibility, and H3K4me1 signal at all constitutive P300 DBSs upon vehicle (DMSO) and co-treatments (TA + TNFα). (PDF 1137 kb)
Growth, yield and grain quality responses of Durum Wheat (Triticum turgidum var. durum) cultivars to irrigated and rain-fed production systems at Debre Zeit, central Ethiopia
Creators: name: GebreMariam, Firew
name: Tesfaye, Kindie
name: Balemi, Tesfaye
name: Meseret, Almaz
name: Geleta, Negash
name: Ahmad, Abdulatif
Publisher: name: Journal of Agriculture and Environmental Sciences
Year: 2024

description:  Wheat production under the irrigation production system is a recent event in Ethiopia. There is limited information on the comparative advantage of the irrigated over rain-fed production systems on yield and grain quality of wheat. Thus, these researches were conducted to evaluate the performance of durum wheat cultivars under irrigation and rain-fed production systems. The treatments consisted of twenty durum wheat cultivars. The experiments were conducted in irrigated and rain-fed conditions for two consecutive years 2020 and 2021. Each experiment was laid out in a randomized complete block design with three replications. After the variance homogeneity test combined analysis over the production years within the production systems was conducted. The effects of production systems on the tested parameters were evaluated by pair-wise T-test analysis. The combined results over 2020 and 2021 years indicated that the tested cultivars significantly affected the growth, grain yield and quality of durum wheat in each of the production systems. In each production system combined over the production years, the cultivars Mangudo, Tesfaye, Utuba, Tate, and Hitosa recorded the highest grain yield while the cultivars Bakalcha, Toltu, Bullalla, Fetan, and Utuba registered the higher grain protein content. The cultivar Utuba combined over 2020 and 2021 years recorded the highest grain yield with greater grain protein content in the rain-fed as well as in the irrigated production systems. According to the results of the pair-wise T-test analysis, the irrigated production system increased the plant height (8.5%), productive tillers per plant (45.6%), spikelet per spike (25.8%), kernel per spike (42.1%), grain yield (40.9%), biomass yield (36%), thousand kernel weight (25%) and hectoliter weight (39%) of durum wheat compared to the rain-fed system. The irrigation production system was superior in most of the parameters of durum wheat compared to the rain-fed. Mangudo, Tesfaye, Utuba, Tate, and Hitosa could be promising cultivars for rain-fed as well as for irrigated systems for enhancing the grain yield of durum wheat in the study area and areas with similar agro-ecological conditions.
description: Journal of Agriculture and Environmental Sciences, Vol. 9 No. 1 (2024)