cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Quantum Interference in Single Molecule Electronic Systems
Creators: name: Sparks, R. E.
name: García-Suárez, V. M.
name: Manrique, D. Zs.
name: Lambert, C. J.
Publisher: name: arXiv
Year: 2011
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We present a general analytical formula and an ab initio study of quantum interference in multi-branch molecules. Ab initio calculations are used to investigate quantum interference in a benzene-1,2-dithiolate (BDT) molecule sandwiched between gold electrodes and through oligoynes of various lengths. We show that when a point charge is located in the plane of a BDT molecule and its position varied, the electrical conductance exhibits a clear interference effect, whereas when the charge approaches a BDT molecule along a line normal to the plane of the molecule and passing through the centre of the phenyl ring, interference effects are negligible. In the case of olygoynes, quantum interference leads to the appearance of a critical energy $E_c$, at which the electron transmission coefficient $T(E)$ of chains with even or odd numbers of atoms is independent of length. To illustrate the underlying physics, we derive a general analytical formula for electron transport through multi-branch structures and demonstrate the versatility of the formula by comparing it with the above ab-initio simulations. We also employ the analytical formula to investigate the current inside the molecule and demonstrate that large counter currents can occur within a ring-like molecule such as BDT, when the point charge is located in the plane of the molecule. The formula can be used to describe quantum interference and Fano resonances in structures with branches containing arbitrary elastic scattering regions connected to nodal sites.
description: 12 pages, 11 figures
Granuliterebra Oyama 1961
Creators: name: Fedosov, Alexander E
name: Malcolm, Gavin
name: Terryn, Yves
name: Gorson, Juliette
name: Modica, Maria Vittoria
name: Holford, Mandë
name: Puillandre, Nicolas
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Neogastropoda
Terebridae
Granuliterebra

description: Genus Granuliterebra Oyama, 1961 (Fig. 10A) Type species: Terebra bathyrhaphe E.A. Smith, 1875; OD. Diagnosis: Shell of small size (< 36 mm), slender, sculptured by strong ribs, bearing nodules on subsutural band and on bottom of ribs, giving concave outline to whorls. Protoconch of 2.5–4 whorls. Distribution: Indian and western Pacific Oceans. Remarks: Species in the genus Pellifronia are similar in having a concave whorl outline, but have notably weaker nodules and a less clearly defined subsutural band. Species with similar nodulose sculpture exist in the genus Neoterebra, but generally these have a wider apical angle or a very shiny texture. Duplicaria tricincta has similar sculpture, but including two raised, thin, spiral cords. Included species: Granuliterebra bathyrhaphe (E. A. Smith, 1875) 4; G. constricta (Thiele, 1925) 4; G. eddunhami Terryn & Holford, 20084; G. oliverai Terryn & Holford, 20084; G. palawanensis (Aubry & Picardal, 2011) 4; G. persica (E. A. Smith, 1877) 4.
description: Published as part of Fedosov, Alexander E, Malcolm, Gavin, Terryn, Yves, Gorson, Juliette, Modica, Maria Vittoria, Holford, Mandë & Puillandre, Nicolas, 2019, Phylogenetic classification of the family Terebridae (Neogastropoda: Conoidea), pp. 359-388 in Journal of Molluscan Studies The Malacological Society of London 85 (4) on page 21, DOI: 10.1093/mollus/eyz004, http://zenodo.org/record/4469844
description: {"references": ["OYAMA, K. 1961. On some new facts of the taxonomy of Terebridae. Venus, 21: 176 - 189.", "TERRYN, Y. & HOLFORD, M. 2008. The Terebridae of Vanuatu with a revision of the genus Granuliterebra Oyama, 1961. Visaya, Supplement, 3: 1 - 118."]}
Darboux cyclides and webs from circles
Creators: name: Pottmann, Helmut
name: Shi, Ling
name: Skopenkov, Mikhail
Publisher: name: arXiv
Year: 2011
Subjects: subject: Algebraic Geometry (math.AG)
subject: FOS: Mathematics
subject: 14J26

description: Motivated by potential applications in architecture, we study Darboux cyclides. These algebraic surfaces of order a most 4 are a superset of Dupin cyclides and quadrics, and they carry up to six real families of circles. Revisiting the classical approach to these surfaces based on the spherical model of 3D Moebius geometry, we provide computational tools for the identification of circle families on a given cyclide and for the direct design of those. In particular, we show that certain triples of circle families may be arranged as so-called hexagonal webs, and we provide a complete classification of all possible hexagonal webs of circles on Darboux cyclides.
description: 34 pages, 20 figures
Gutenberg-Richter Scaling - A New Paradigm
Creators: name: Serino, C. A.
name: Tiampo, K. F.
name: Klein, W.
Publisher: name: arXiv
Year: 2010
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Geophysics (physics.geo-ph)
subject: FOS: Physical sciences

description: We introduce a new model for an earthquake fault system that is composed of non-interacting simple lattice models with different levels of damage denoted by $q$. The undamaged lattice models ($q=0$) have Gutenberg-Richter scaling with a cumulative exponent $β=1/2$, whereas the damaged models do not have well defined scaling. However, if we consider the "fault system" consisting of all models, damaged and undamaged, we get excellent scaling with the exponent depending on the relative frequency with which faults with a particular amount of damage occur in the fault system. This paradigm combines the idea that Gutenberg-Richter scaling is associated with an underlying critical point with the notion that the structure of a fault system also affects the statistical distribution of earthquakes. In addition, it provides a framework in which the variation, from one tectonic region to another, of the scaling exponent, or $b$-value, can be understood.
description: 5 pages, 5 figures
Superconductivity and the BCS-Bogoliubov Theory
Creators: name: Watanabe, Shuji
Publisher: name: arXiv
Year: 2010
Subjects: subject: Classical Analysis and ODEs (math.CA)
subject: Mathematical Physics (math-ph)
subject: FOS: Mathematics
subject: FOS: Physical sciences
subject: 15A90

description: First, we reformulate the BCS-Bogoliubov theory of superconductivity from the viewpoint of linear algebra. We define the BCS Hamiltonian on $\mathbb{C}^{2^{2M}}$, where $M$ is a positive integer. We discuss selfadjointness and symmetry of the BCS Hamiltonian as well as spontaneous symmetry breaking. Beginning with the gap equation, we give the well-known expression for the BCS state and find the existence of an energy gap. We also show that the BCS state has a lower energy than the normal state. Second, we introduce a new superconducting state explicitly and show from the viewpoint of linear algebra that this new state has a lower energy than the BCS state. Third, beginning with our new gap equation, we show from the viewpoint of linear algebra that we arrive at the results similar to those in the BCS-Bogoliubov theory.
description: 15 pages
Aasa Aaloe välipäevik nr 14
Creators: name: Aaloe, Aasa
Publisher: name: Tallinna Tehnikaülikooli Geoloogia Instituut
Year: 1982
Subjects: Ordovician
Estonia
Kukruse stage
oil shale
drill cores
geological descriptions

description: Field notebook with description Kukruse Stage and oil shale productive beds in drill cores Estonia
Aasa Aaloe välipäevik nr 15
Creators: name: Aaloe, Aasa
Publisher: name: Tallinna Tehnikaülikooli Geoloogia Instituut
Year: 1982
Subjects: Ordovician
Estonia
Kukruse stage
oil shale
drill cores
geological descriptions

description: Field notebook with description Kukruse Stage and oil shale productive beds in drill cores Estonia
Hastulopsis Oyama 1961
Creators: name: Fedosov, Alexander E
name: Malcolm, Gavin
name: Terryn, Yves
name: Gorson, Juliette
name: Modica, Maria Vittoria
name: Holford, Mandë
name: Puillandre, Nicolas
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Neogastropoda
Terebridae
Hastulopsis

description: Genus Hastulopsis Oyama, 1961 (Fig. 10B) Type species: Terebra melanacme E. A. Smith, 1873; OD. Diagnosis: Shell small to medium-sized (to 60 mm), shiny, faintly axially ribbed, with numerous fine spiral incisions. Subsutural band generally not spirally decorated, bordered by relatively deep incision (Terryn, 2007). Distribution: Indian and western Pacific Oceans. Remarks: The genus comprises two groups of shallow-water species, one found from the eastern coast of Africa to the Arabian Gulf and another in waters of mainland Japan to Australia. Similar, but deeper-water species are found in the genus Maculauger n. gen., most of which can be recognized by having a row of large spots on the periphery. The species of Myurella have much stronger and more distinct sculpture features, and generally a brown basal area. Included species: Hastulopsis baliensis Terryn & Dekker, 20174; H. blanda (Deshayes, 1859) 4; H. cebuensis Gargiulo, 20144; H. elialae (Aubry, 1994) 4; H. gotoensis (E. A. Smith, 1879) 4; H. loisae (E. A. Smith, 1903) 4; H. maestratii Terryn & Rosado, 20114; H. marmorata (Deshayes, 1859) 4; H. masirahensis Terryn & Rosado, 20164; H. melanacme (E. A. Smith, 1873) 4; H. mirbatensis Terryn & Rosado, 20164; H. suspensa (E. A. Smith, 1904) 4; H. whiteheadae (Aubry & Marquet, 1995) 4.
description: Published as part of Fedosov, Alexander E, Malcolm, Gavin, Terryn, Yves, Gorson, Juliette, Modica, Maria Vittoria, Holford, Mandë & Puillandre, Nicolas, 2019, Phylogenetic classification of the family Terebridae (Neogastropoda: Conoidea), pp. 359-388 in Journal of Molluscan Studies The Malacological Society of London 85 (4) on page 21, DOI: 10.1093/mollus/eyz004, http://zenodo.org/record/4469844
description: {"references": ["OYAMA, K. 1961. On some new facts of the taxonomy of Terebridae. Venus, 21: 176 - 189.", "TERRYN, Y. 2007. A collectors' guide to Recent Terebridae (Mollusca: Neogastropoda). Conchbooks, Hackenheim."]}
Additional file 1 of A systematic review of the relationship between normal range of serum thyroid-stimulating hormone and bone mineral density in the postmenopausal women
Creators: name: Zhu, Xiaoli
name: Li, Man
name: Dong, Xinying
name: Liu, Fen
name: Li, Shugang
name: Hu, Yifei
Publisher: name: figshare
Year: 2023
Subjects: subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Marine Biology
subject: Cancer
subject: Science Policy

description: Additional File 1: PRISMA 2020 Checklist
Aasa Aaloe välipäevik nr 16
Creators: name: Aaloe, Aasa
Publisher: name: Tallinna Tehnikaülikooli Geoloogia Instituut
Year: 1982
Subjects: Ordovician
Latvia
Uhaku stage
Kukruse stage
drill cores
geological descriptions

description: Field notebook with description Uhaku and Kukruse Stage in drill cores Latvia
Pristiterebra Oyama 1961
Creators: name: Fedosov, Alexander E
name: Malcolm, Gavin
name: Terryn, Yves
name: Gorson, Juliette
name: Modica, Maria Vittoria
name: Holford, Mandë
name: Puillandre, Nicolas
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Neogastropoda
Terebridae
Pristiterebra

description: Genus Pristiterebra Oyama, 1961 (Fig. 10C) Type species: Terebra tsuboiana Yokoyama, 1922 †; OD. Synonym: Laeviacus Oyama, 1961 (type species Terebra chibana Yokoyama, 1922; OD). Diagnosis: Shell small to medium-sized (20–65 mm). Whorls flattened to convex, with predominant pustulose or seldom cancellate sculpture. Whorl periphery shifted abapically, leading to truncated appearance of shell, with shell base abruptly constricted to short siphonal canal. Aperture wide, especially in anterior portion. Distribution: Western Pacific. Remarks: Acharacteristic truncated outline with a short siphonal canal and broad aperture allow for easy recognition of Pristiterebra among other terebrid genera. Species in Pristiterebra are nearest to the nodulose species of Neoterebra (N. tuberculosa, N. glauca, N. petiveriana), which can be recognized by the presence of a distinct subsutural groove. Some species of Gradaterebra and Partecosta have similar shell outline, but both can be differentiated from Pristiterebra by dominant axial sculpture or, rarely, complete lack of sculpture, and (in Partecosta) by generally smaller size. Included species: Pristiterebra bifrons (Hinds, 1844) 4; P. frausseni Poppe, Tagaro & Terryn, 20094 n. comb.; P. miranda (E. A. Smith, 1873) 4 n. comb.; P. pustulosa (E. A. Smith, 1879) 4 n. comb.; P. tuberculosa (Hinds, 1844) 4 n. comb.
description: Published as part of Fedosov, Alexander E, Malcolm, Gavin, Terryn, Yves, Gorson, Juliette, Modica, Maria Vittoria, Holford, Mandë & Puillandre, Nicolas, 2019, Phylogenetic classification of the family Terebridae (Neogastropoda: Conoidea), pp. 359-388 in Journal of Molluscan Studies The Malacological Society of London 85 (4) on page 21, DOI: 10.1093/mollus/eyz004, http://zenodo.org/record/4469844
description: {"references": ["OYAMA, K. 1961. On some new facts of the taxonomy of Terebridae. Venus, 21: 176 - 189."]}
Additional file 2 of A novel polypeptide CAPG-171aa encoded by circCAPG plays a critical role in triple-negative breast cancer
Creators: name: Song, Runjie
name: Guo, Peilan
name: Ren, Xin
name: Zhou, Lijun
name: Li, Peng
name: Rahman, Nafis A
name: Wołczyński, Sławomir
name: Li, Xiru
name: Zhang, Yanjun
name: Liu, Mei
name: Liu, Jiali
name: Li, Xiangdong
Publisher: name: figshare
Year: 2023
Subjects: Biophysics
Biochemistry
Space Science
Molecular Biology
Biological Sciences not elsewhere classified
Cancer

description: Supplementary Material 2
Universality of Cluster Dynamics
Creators: name: McFadden, Carson
name: Bouchard, Louis-S.
Publisher: name: arXiv
Year: 2010
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We have studied the kinetics of cluster formation for dynamical systems of dimensions up to $n=8$ interacting through elastic collisions or coalescence. These systems could serve as possible models for gas kinetics, polymerization and self-assembly. In the case of elastic collisions, we found that the cluster size probability distribution undergoes a phase transition at a critical time which can be predicted from the average time between collisions. This enables forecasting of rare events based on limited statistical sampling of the collision dynamics over short time windows. The analysis was extended to L$^p$-normed spaces ($p=1,...,\infty$) to allow for some amount of interpenetration or volume exclusion. The results for the elastic collisions are consistent with previously published low-dimensional results in that a power law is observed for the empirical cluster size distribution at the critical time. We found that the same power law also exists for all dimensions $n=2,...,8$, 2D L$^p$ norms, and even for coalescing collisions in 2D. This broad universality in behavior may be indicative of a more fundamental process governing the growth of clusters.
Tissue microarray based biomarker study in human cutaneous melanoma
Creators: name: Cheng, Yabin
Publisher: name: University of British Columbia
Year: 2014

description: Cancer therapy recently experienced remarkable advances with better understanding of cancer pathogenesis and introduction of new intervention strategies. Biomarkers reflective of the presence of tumor cells, or linked with clinical outcomes, have potential to improve the management of cancers. The purpose of this thesis study is to identify novel biomarkers of human cancers based on tissue microarray (TMA) technology and to determine their value for clinical application in cancer management using melanoma as the model. Melanoma arises from uncontrolled proliferation of melanocytes. Although melanoma accounts for only 4% of all skin cancer, it is responsible for 80% of deaths related to skin malignancies. To discover novel biomarkers of melanoma, we constructed a TMA using biopsies from 707 patients with various stages of melanocytic lesions. Using immunohistochemistry and TMA, multiple biomarker candidates were evaluated, and many were found to have significant prognostic value, including expression loss of Fbw7. To further improve the clinical value of these markers, various combinations of individual markers were evaluated, leading to the identification of KAI1 and p27 that together showed much stronger prognostic value than when used as individual markers. Moreover, since there has been a dearth of reliable prognostic markers to offer prognostic information on specific melanoma stages, we identified the AJCC-stage specific prognostic markers, including BRAF protein expression as a prognostic marker for thin melanomas. In that significant prognostic value was found for Fbw7 protein in melanoma, we performed in vitro experiments on this protein in detail. Our data showed that the alpha isoform of Fbw7, located in the cell nucleus, was the dominant form expressed in melanoma. Knock-down of Fbw7α promoted melanoma cell migration, and the MAPK signaling pathway was required for Fbw7 function in melanoma. These findings indicate loss of Fbw7 to be an independent melanoma prognostic marker, and important for the development of malignant behaviors of melanoma cells. This study has demonstrated that the combination of TMAs of cancers with the corresponding clinical database represents a powerful technological platform for biomarker discovery. TMA/clinical database combination-based investigations should be applicable for the investigation of other types of human cancers as well.
Gradaterebra Cotton & Godfrey 1932
Creators: name: Fedosov, Alexander E
name: Malcolm, Gavin
name: Terryn, Yves
name: Gorson, Juliette
name: Modica, Maria Vittoria
name: Holford, Mandë
name: Puillandre, Nicolas
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Neogastropoda
Terebridae
Gradaterebra

description: Genus Gradaterebra Cotton & Godfrey, 1932 (Fig. 10D) Type species: Gradaterebra scalariformis Cotton & Godfrey, 1932; OD. Diagnosis: Shell small (< 25 mm), often dull-coloured, with flattened tobulbouswhorls; axialsculptureof prominentribs; spiralsculpture absent, microscopic or represented by fine cords; last whorl inflated. Distribution: Indian and SW Pacific Oceans. Remarks. The genus mainly comprises small species from Australia and South Africa, which can be differentiated based on adult size < 25 mm. Included species: Gradaterebra scalariformis (Cotton & Godfrey, 1932) 4 n. comb.; G. assecla (Iredale, 1924) 4 n. comb.; G. capensis (E. A. Smith, 1873) 4 n. comb.; G. easmithi (Aubry, 1999) 4 n. comb.; G. kowiensis (Turton, 1932) 4 n. comb.; G. lightfooti (E. A. Smith, 1899) 4 n. comb.; G. ninfae (Campbell, 1961) 4 n. comb.; G. pilsbryi (Aubry, 1999) 4 n. comb.; G. planecosta (Barnard, 1958) 4 n. comb.; G. severa (Melvill, 1897) 4 n. comb.; G. sorrentense (Aubry, 1999) 4 n. comb.; G. taylori (Reeve, 1860) 4 n. comb.
description: Published as part of Fedosov, Alexander E, Malcolm, Gavin, Terryn, Yves, Gorson, Juliette, Modica, Maria Vittoria, Holford, Mandë & Puillandre, Nicolas, 2019, Phylogenetic classification of the family Terebridae (Neogastropoda: Conoidea), pp. 359-388 in Journal of Molluscan Studies The Malacological Society of London 85 (4) on pages 21-22, DOI: 10.1093/mollus/eyz004, http://zenodo.org/record/4469844
The first observation of optical pulsations from a soft gamma repeater: SGR 0501+4516
Creators: name: Dhillon, V. S.
name: Marsh, T. R.
name: Littlefair, S. P.
name: Copperwheat, C. M.
name: Hickman, R. D. G.
name: Kerry, P.
name: Levan, A. J.
name: Rea, N.
name: Savoury, C. D. J.
name: Tanvir, N. R.
name: Turolla, R.
name: Wiersema, K.
Publisher: name: arXiv
Year: 2011
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: We present high-speed optical photometry of the soft gamma repeater SGR 0501+4516, obtained with ULTRACAM on two consecutive nights approximately 4 months after the source was discovered via its gamma-ray bursts. We detect SGR 0501+4516 at a magnitude of i' = 24.4+/-0.1. We present the first measurement of optical pulsations from an SGR, deriving a period of 5.7622+/-0.0003 s, in excellent agreement with the X-ray spin period of the neutron star. We compare the morphologies of the optical pulse profile with the X-ray and infrared pulse profiles; we find that the optical, infrared and harder X-rays share similar double-peaked morphologies, but the softer X-rays exhibit only a single-peaked morphology, indicative of a different origin. The optical pulsations appear to be in phase with the X-ray pulsations and exhibit a root-mean-square pulsed fraction of 52+/-7%, approximately a factor of two greater than in the X-rays. Our results find a natural explanation within the context of the magnetar model for SGRs.
description: 5 pages, 3 figures, accepted for publication in MNRAS Letters
Aasa Aaloe välipäevik nr 17
Creators: name: Aaloe, Aasa
Publisher: name: Tallinna Tehnikaülikooli Geoloogia Instituut
Year: 1985
Subjects: Ordovician
Estonia
Uhaku stage
Kukruse stage
drill cores
geological descriptions

description: Field notebook with description Uhaku and Kukruse Stage in drill cores Estonia
Data-Driven Remaining Useful Life (RUL) Prediction
Creators: name: Sahoo, Biswajit
Publisher: name: Zenodo
Year: 2020
Subjects: remaining useful life prediction
machine learning
deep learning
cmapss dataset

description: This is the first release of the project in zenodo. Latest version of the project can be found at https://biswajitsahoo1111.github.io/rul_codes_open/.
Additional file 3 of A novel polypeptide CAPG-171aa encoded by circCAPG plays a critical role in triple-negative breast cancer
Creators: name: Song, Runjie
name: Guo, Peilan
name: Ren, Xin
name: Zhou, Lijun
name: Li, Peng
name: Rahman, Nafis A
name: Wołczyński, Sławomir
name: Li, Xiru
name: Zhang, Yanjun
name: Liu, Mei
name: Liu, Jiali
name: Li, Xiangdong
Publisher: name: figshare
Year: 2023
Subjects: Biophysics
Biochemistry
Space Science
Molecular Biology
Biological Sciences not elsewhere classified
Cancer

description: Supplementary Material 3
Equilibrium statistical mechanics of bipartite spin systems
Creators: name: Barra, Adriano
name: Genovese, Giuseppe
name: Guerra, Francesco
Publisher: name: arXiv
Year: 2010
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: Aim of this paper is to give an extensive treatment of bipartite mean field spin systems, ordered and disordered: at first, bipartite ferromagnets are investigated, achieving an explicit expression for the free energy trough a new minimax variational principle. Furthermore via the Hamilton-Jacobi technique the same free energy structure is obtained together with the existence of its thermodynamic limit and the minimax principle is connected to a standard max one. The same is investigated for bipartite spin-glasses: By the Borel-Cantelli lemma a control of the high temperature regime is obtained, while via the double stochastic stability technique we get also the explicit expression of the free energy at the replica symmetric level, uniquely defined by a minimax variational principle again. A general results that states that the free energies of these systems are convex linear combinations of their independent one party model counterparts is achieved too. For the sake of completeness we show further that at zero temperature the replica symmetric entropy becomes negative and, consequently, such a symmetry must be broken. The treatment of the fully broken replica symmetry case is deferred to a forthcoming paper. As a first step in this direction, we start deriving the linear and quadratic constraints to overlap fluctuations.
Aasa Aaloe välipäevik nr 18
Creators: name: Aaloe, Aasa
Publisher: name: Tallinna Tehnikaülikooli Geoloogia Instituut
Year: 1985
Subjects: Ordovician
Estonia
Uhaku stage
Kukruse stage
drill cores
geological descriptions

description: Field notebook with description Uhaku and Kukruse Stage in drill cores Estonia
Aasa Aaloe välipäevik nr 19
Creators: name: Aaloe, Aasa
Publisher: name: Tallinna Tehnikaülikooli Geoloogia Instituut
Year: 1985
Subjects: Ordovician
Estonia
Uhaku stage
Kukruse stage
drill cores
geological descriptions

description: Field notebook with description Uhaku and Kukruse Stage in drill cores Estonia
Additional file 1 of Functional and structural characteristics of HLA-B*13:01-mediated specific T cells reaction in dapsone-induced drug hypersensitivity
Creators: name: Jiang, Haiqin
name: Wang, Chuang-Wei
name: Wang, Zhaoxi
name: Dai, Yufei
name: Zhu, Yanping
name: Lee, Yun-Shien
name: Cao, Yang
name: Chung, Wen-Hung
name: Ouyang, Songying
name: Wang, Hongsheng
Publisher: name: figshare
Year: 2022
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 1. Methods.
Aasa Aaloe välipäevik nr 20
Creators: name: Aaloe, Aasa
Publisher: name: Tallinna Tehnikaülikooli Geoloogia Instituut
Year: 1986
Subjects: Ordovician
Estonia
Leningrad oblast
outcrops
drill cores
geological descriptions

description: Field notebook with description Ordovician in Viki drill core, and Early Ordovician in Estonia and Leningrad oblast
Additional file 2 of Functional and structural characteristics of HLA-B*13:01-mediated specific T cells reaction in dapsone-induced drug hypersensitivity
Creators: name: Jiang, Haiqin
name: Wang, Chuang-Wei
name: Wang, Zhaoxi
name: Dai, Yufei
name: Zhu, Yanping
name: Lee, Yun-Shien
name: Cao, Yang
name: Chung, Wen-Hung
name: Ouyang, Songying
name: Wang, Hongsheng
Publisher: name: figshare
Year: 2022
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 2: Figure S1. Flow cytometry analysis of DDS-specific T cells in patients with DIHS. A We performed in vitro T cells expansion for day0, day21 and day35 of PBMC from DDS-induced DIHS patients and tolerant donors, as measured the ratios of CD8+ and CD4+ T cell by flow cytometry. B, C The ratios of CD8+ and CD4+ T cells of DDS-induced DIHS patients and tolerant individuals after T cells expansion were shown. The entire experiment was repeated thrice. *P < 0.05, **P < 0.01, ***P < 0.001, by two-tailed Student t test. Figure S2. The results of IFN-γ ELISpot assays. A DDS-specific CTLs activation was detected by IFN-γ ELISpot assays in a DDS-concentration manner. B T cells-mediated were blocked by anti–HLA class I antibody but not by anti-HLA class II antibody. Figure S3. Determination of the cross-reactivity of DDS and other sulfa drugs for dapsone-SCAR patients carried HLA-B*13:01. A Granulysin-based lymphocyte activation test (LAT) was performed in 6 dapsone-induced SCAR patients carried HLA-B*13:01 and 5 tolerant controls. A positive result was defined as a 1.3-fold increase in granulysin release compared to the controls (dashed blue line). Black solid dot, dapsone-SJS patient; blue solid dot, dapsone-DRESS patient, gray solid dot, dapsone-tolerant subject. B the sensitivity and specificity of LAT for dapsone-induced SCAR patients carried HLA-B*13:01 and their cross-reactive to dapsone are showed. Figure S4. SDS-PAGE analysis for β2M and HLA-B*13:01 protein. A 1. Purified HLA-B*13:01; 2. purified β2M; 3. Marker; 4. HLA-B*13:01-β2M complex. B the recombinant HLA-B*13:01 protein bounded to DDS in a DDS-concentration manner, with an estimated low-affinity of the micromolar range (Kd = 68.54 M). Figure S5. Pulsing assays and LC–MS analysis peptides involved in DDS binding with HLA-B*13:01. A Peptides were analyzed on C1R (HLA-B*13:01) with DDS cocultured by Co-IP and LC–MS. B T Lymphocyte activation test was performed from C1R (HLA-B*13:01) cultured with DDS or two peptides by IFN-γ release. Figure S6. Flow cytometry analysis of DDS-specific TCR transfectants. TRA12-3/TRB28, TCRA13-1/TRB5-1 and TCRA12-3/TRB30 were reconstituted and overexpressed into PBMC form DDS tolerant subjects, and the expression levels of TCRαβ and GFP were determined by FACS.
E2XLRADR (Energy Efficient Cross Layer Routing Algorithm with Dynamic Retransmission for Wireless Sensor Networks)
Creators: name: Babulal, Kanojia Sindhuben
name: Tewari, Rajiv Ranjan
Publisher: name: arXiv
Year: 2010
Subjects: subject: Networking and Internet Architecture (cs.NI)
subject: FOS: Computer and information sciences

description: The main focus of this article is to achieve prolonged network lifetime with overall energy efficiency in wireless sensor networks through controlled utilization of limited energy. Major percentage of energy in wireless sensor network is consumed during routing from source to destination, retransmission of data on packet loss. For improvement, cross layered algorithm is proposed for routing and retransmission scheme. Simulation and results shows that this approach can save the overall energy consumption
Development of a Uniform Magnetic Field Generator for Magnetic Resonance Applications
Creators: name: Öztürk, Yavuz
Publisher: name: Zenodo
Year: 2017
Subjects: Magnetic Fields, Magnetism, Uniform Fields, Homogeneity

description: In this thesis work, we have investigated possible structures for generating uniform magnetic fields. As an introduction, we gave an overall picture of the uniform magnetic field generation literature. In the second part, we worked on several different candidate structures for uniform magnetic field generation, and we have concluded that spheroidal surfaces – which have been revealed in theoretical analysis, and later confirmed by FEA results – are very promising for practical applications. For making use of the advantages of spheroidal surfaces, firstly a constant ampere per turn ratio along the major axis of a spheroid was studied for uniform magnetic field generation therein. Later, a continuous winding structure, which is easier to realize in practice – a spheroidal helical coil – have been proposed and modelled by FEA calculations. Our results suggest that, uniformity of at least 20 ppm within 75% of a whole spheroidal volume and 50 ppm uniformity within 90% of it are in fact achievable. In the final part of the thesis, we have focused on the production of such a coil and a method has been proposed, applied and experimental measurements were conducted on the prototype. For that, a computer aided design (CAD) of an air-cored spheroidal coil was performed a priori, using the formulation; and a coil template was produced, employing a commercial off the shelf, affordable, 3D desktop printer; inasmuch as it is virtually impossible via conventional production techniques. The coil has been finalized using this template, and the magnetic field created inside employing a current source was measured by a Hall probe through holes that have been intentionally left on the template. Our measurements agree with the finite element results and show a good magnetic field uniformity therein. We have achieved a field uniformity of around 1% experimentally, although numerical analysis pointed out the possibility of 20 ppm uniformity. Thus, the developed spheroidal surface coil can be improved by following a more accurate manufacturing process.
Perirhoe Dall 1908
Creators: name: Fedosov, Alexander E
name: Malcolm, Gavin
name: Terryn, Yves
name: Gorson, Juliette
name: Modica, Maria Vittoria
name: Holford, Mandë
name: Puillandre, Nicolas
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Neogastropoda
Terebridae
Perirhoe

description: Genus Perirhoe Dall, 1908 (Fig. 10E) Type species: Perirhoe circumcincta (Deshayes, 1857); OD. Diagnosis: Shell small to medium-sized (< 50 mm), solid; axial sculpture weak to obsolete; spiral sculpture of irregular punctate groves; subsutural band weakly defined. Distribution: S Pacific, particularly New Caledonia. Remarks: Perirhoe is close to the genus Oxymeris in terms of shell proportions; however, it can be readily differentiated from species of the latter by the distinct spiral grooves throughout the whorls’ height. The sculpture pattern of widely set spiral grooves in Perirhoe resembles that in some species of Terebra, but the latter group has notably more slender shells, with higher spire and less robust siphonal canal. Included species: Perirhoe circumcincta (Deshayes, 1857) 4; Perirhoe valentinae (Aubry, 1999) 4 n. comb.
description: Published as part of Fedosov, Alexander E, Malcolm, Gavin, Terryn, Yves, Gorson, Juliette, Modica, Maria Vittoria, Holford, Mandë & Puillandre, Nicolas, 2019, Phylogenetic classification of the family Terebridae (Neogastropoda: Conoidea), pp. 359-388 in Journal of Molluscan Studies The Malacological Society of London 85 (4) on page 22, DOI: 10.1093/mollus/eyz004, http://zenodo.org/record/4469844
description: {"references": ["DALL, W. H. 1908. Subdivisions of the Terebridae. Nautilus, 21: 124 - 125."]}
Higher order corrections to Higgs boson decays in the MSSM with complex parameters
Creators: name: Williams, Karina E.
name: Rzehak, Heidi
name: Weiglein, Georg
Publisher: name: arXiv
Year: 2011
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We discuss Higgs boson decays in the CP-violating MSSM, and examine their phenomenological impact using cross section limits from the LEP Higgs searches. This includes a discussion of the full 1-loop results for the partial decay widths of neutral Higgs bosons into lighter neutral Higgs bosons (h_a -> h_b h_c) and of neutral Higgs bosons into fermions (h_a -> f fbar). In calculating the genuine vertex corrections, we take into account the full spectrum of supersymmetric particles and all complex phases of the supersymmetric parameters. These genuine vertex corrections are supplemented with Higgs propagator corrections incorporating the full one-loop and the dominant two-loop contributions, and we illustrate a method of consistently treating diagrams involving mixing with Goldstone and Z bosons. In particular, the genuine vertex corrections to the process h_a -> h_b h_c are found to be very large and, where this process is kinematically allowed, can have a significant effect on the regions of the CPX benchmark scenario which can be excluded by the results of the Higgs searches at LEP. However, there remains an unexcluded region of CPX parameter space at a lightest neutral Higgs boson mass of ~45 GeV. In the analysis, we pay particular attention to the conversion between parameters defined in different renormalisation schemes and are therefore able to make a comparison to the results found using renormalisation group improved/effective potential calculations.
description: 79 pages, 40 figures
Plasmons in strong superconductors
Creators: name: Baldo, Marcello
name: Ducoin, Camille
Publisher: name: arXiv
Year: 2011
Subjects: subject: Nuclear Theory (nucl-th)
subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: We present a study of the possible plasmon excitations that can occur in systems where strong superconductivity is present. In these systems the plasmon energy is comparable to, or smaller than the pairing gap. As a prototype of these systems we consider the proton component of neutron star matter just below the crust when electron screening is not taken into account. For the realistic case we consider in detail the different aspects of the elementary excitations when the proton, electron components are considered within the Random Phase Approximation generalized to the superfluid case, while the influence of the neutron component is considered only at qualitative level. Electron screening plays a major role in modifying the proton spectrum and spectral function. At the same time the electron plasmon is strongly modified and damped by the indirect coupling with the superfluid proton component, even at moderately low values of the gap. The excitation spectrum shows the interplay of the different components and their relevance for each excitation mode. The results are relevant for neutrino physics and thermodynamical processes in neutron stars. If electron screening is neglected, the spectral properties of the proton component show some resemblance with the physical situation in high T$_c$ superconductors, and we briefly discuss similarities and differences in this connection. In a general prospect, the results of the study emphasize the role of Coulomb interaction in strong superconductors.
description: To appear in Physics of Atomic Nuclei (issue celebrating the centenary of A. Migdal's birth)
Lowering the energy threshold of large-mass bolometric detectors
Creators: name: Di Domizio, Sergio
name: Orio, Filippo
name: Vignati, Marco
Publisher: name: arXiv
Year: 2010
Subjects: subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: Large-mass bolometers are used in particle physics experiments to search for rare processes. The energy threshold of such detectors plays a critical role in their capability to search for dark matter interactions and rare nuclear decays. We have developed a trigger and a pulse shape algorithm based on the matched filter technique which, when applied to data from test bolometers of the CUORE experiment, lowered the energy threshold from tens of keV to the few keV region. The detection efficiency is in excess of 80%, and nearly all nonphysical pulses are rejected.
description: 12 pages, 12 figures
Substrate-induced bianisotropy in metamaterials
Creators: name: Powell, David A.
name: Kivshar, Yuri S.
Publisher: name: arXiv
Year: 2010
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: We demonstrate that the presence of a supporting substrate can break the symmetry of a metamaterial structure, changing the symmetry of its effective parameters, and giving rise to bianisotropy. This indicates that magneto-electric coupling will occur in all metamaterials fabricated on a substrate, including those with symmetric designs.
Equation of State of Structured Matter at Finite Temperature
Creators: name: Maruyama, Toshiki
name: Yasutake, Nobutoshi
name: Tatsumi, Toshitaka
Publisher: name: arXiv
Year: 2010
Subjects: subject: Nuclear Theory (nucl-th)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: We investigate the properties of nuclear matter at the first-order phase transitions such as liquid-gas phase transition and hadron-quark phase transition. As a general feature of the first-order phase transitions of matter consisting of many species of charged particles, there appears a mixed phases with geometrical structures called ``pasta'' due to the balance of the Coulomb repulsion and the surface tension between two phases. The equation of state (EOS) of mixed phase is different from the one obtained by a bulk application of the Gibbs conditions or by the Maxwell construction due to the effects of the non-uniform structure. We show that the charge screening and strong surface tension make the EOS close to that of the Maxwell construction. The thermal effects are elucidated as well as the above finite-size effects.
description: Presentation at NFQCD 2010 at Yukawa Inst. TO appear on Prog. Theor. Phys. Suppl
The environment and distribution of emitting electrons as a function of source activity in Markarian 421
Creators: name: Mankuzhiyil, Nijil
name: Ansoldi, Stefano
name: Persic, Massimo
name: Tavecchio, Fabrizio
Publisher: name: arXiv
Year: 2011
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: For the high-frequency peaked BL Lac object Mrk 421 we study the variation of the spectral energy distribution (SED) as a function of source activity, from quiescent to active. We use a fully automatized chi-squared minimization procedure, instead of the "eyeball" procedure more commonly used in the literature, to model nine SED datasets with a one-zone Synchrotron-Self-Compton (SSC) model and examine how the model parameters vary with source activity. The latter issue can finally be addressed now, because simultaneous broad-band SEDs (spanning from optical to VHE photon energies) have finally become available. Our results suggest that in Mrk 421 the magnetic field decreases with source activity, whereas the electron spectrum's break energy and the Doppler factor increase -- the other SSC parameters turn out to be uncorrelated with source activity. In the SSC framework these results are interpreted in a picture where the synchrotron power and peak frequency remain constant with varying source activity, through a combination of decreasing magnetic field and increasing number density of electrons below the break energy: since this leads to an increased electron-photon scattering efficiency, the resulting Compton power increases, and so does the total (= synchrotron plus Compton) emission.
description: Accepted for publication in Astrophysical Journal; 23 pages, 3 figures, 2 tables
Microtrypetes Pilsbry & Lowe 1932
Creators: name: Fedosov, Alexander E
name: Malcolm, Gavin
name: Terryn, Yves
name: Gorson, Juliette
name: Modica, Maria Vittoria
name: Holford, Mandë
name: Puillandre, Nicolas
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Neogastropoda
Terebridae
Microtrypetes

description: Genus Microtrypetes Pilsbry & Lowe, 1932 (Fig. 10F) Type species: Microtrypetes iola Pilsbry & Lowe, 1932; OD. Diagnosis: Shell small (< 20 mm), dull, with turreted outline due to subcylindrical to clearly cylindrical whorl outline. Sculpture of strong, straight to finely curving axial ribs and fine spiral striae. Subsutural band indistinct or weakly defined. Siphonal canal long, curved. Distribution: E Pacific. Remarks: The genus can be differentiated from other New World genera of Terebridae by the stepped appearance of the spire, due to the cylindrical or subcylindrical whorl outline, by the generally indistinct subsutural band and by the siphonal canal that is rather long for the family. Included species: Microtrypetes iola Pilsbry & Lowe, 19324; M. polypenus (Pilsbry & Lowe, 1932) 4 n. comb. Descriptionsof newspecies
description: Published as part of Fedosov, Alexander E, Malcolm, Gavin, Terryn, Yves, Gorson, Juliette, Modica, Maria Vittoria, Holford, Mandë & Puillandre, Nicolas, 2019, Phylogenetic classification of the family Terebridae (Neogastropoda: Conoidea), pp. 359-388 in Journal of Molluscan Studies The Malacological Society of London 85 (4) on pages 22-23, DOI: 10.1093/mollus/eyz004, http://zenodo.org/record/4469844
Role of quark-interchange processes in evolution of mesonic matter
Creators: name: Li, Yu-Qi
name: Xu, Xiao-Ming
name: Ge, Hui-Jun
Publisher: name: arXiv
Year: 2011
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We divide the cross section for a meson-meson reaction into three parts. The first part is for the quark-interchange process, the second for quark-antiquark annihilation processes and the third for resonant processes. Master rate equations are established to yield time dependence of fugacities of pions, rhos, kaons and vetor kaons. The equations include cross sections for inelastic scattering of pions, rhos, kaons and vector kaons. Cross sections for quark-interchange-induced reactions, that were obtained in a potential model, are parametrized for convenient use. The number densities of pion and rho (kaon and vector kaon) are altered by quark-interchange processes in equal magnitudes but opposite signs. The master rate equations combined with the hydrodynamic equations for longitudinal and transverse expansion are solved with many sets of initial meson fugacities. Quark-interchange processes are shown to be important in the contribution of the inelastic meson-meson scattering to evolution of mesonic matter.
description: 28 pages, 1 figure, 8 tables
A tale of two Snettisham patches
Creators: name: Machling, Tess
Publisher: name: Zenodo
Year: 2025

description: While I was perusing the Snettisham volumes, I happened to notice an image of a tubular torc from Hoard A at Snettisham, torc A.1. This torc was found by Ray Williamson in 1948, one of the first torcs found at Snettisham. When found – as can be seen from a 1949 newspaper article and from a photo in a paper by Clarke from 1951 – this torc was pretty bashed up (understandable really for a gold tube made from sheet only about 0.1mm thick).
اتجاهات صناعة الفهارس الفنية.pdf
Creators: name: ibrahim, ihab
Publisher: name: figshare
Year: 2021
Subjects: subject: 200318 Middle Eastern Languages
subject: FOS: Languages and literature

description: تُعد الفهارس الفنية من أهم مكملات التحقيق والنشر؛ إذ إن فهارس الكتاب هي مفاتيحه الحقيقية، فهي الكاشفة عما يحتويه من مادة علمية بعناصرها المختلفة، ومن ثم كان الاهتمام بفهرسة المخطوط المحقق أمرا غير ذي ترف. وباختلاف مدارس التحقيق وتنوع مذاهبه؛ تنوعت اتجاهات صناعة الفهارس الفنية، وأخذ هذا التنوع اتجاهات عدة، وأشكالا متباينة، ويهدف هذا البحث -من خلال عرض تلك الاتجاهات المتباينة- إلى الوقوف على أفضل السبل لصناعة الفهارس الفنية في النص أو المخطوط المحقَّق، بما يسمح لهذه الفهارس أن تحقق وظيفتها التي جُعلت لها من حيث كونها مفاتيح حقيقية للنص المحقق، وتُسهِّل وصول القارئ إلى مبتغاه في سهولة ويسر، دون تضييع جهد أو وقت في سبيل الوصول إلى شيء من المحتوى المفهرس.
Simulations with dynamical HISQ quarks
Creators: name: Bazavov, A.
name: Bernard, C.
name: DeTar, C.
name: Freeman, W.
name: Gottlieb, Steven
name: Heller, U. M.
name: Hetrick, J. E.
name: Laiho, J.
name: Levkova, L.
name: Oktay, M.
name: Osborn, J.
name: Sugar, R. L.
name: Toussaint, D.
name: Van de Water, R. S.
Publisher: name: arXiv
Year: 2010
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We report on the status of a program of generating and using configurations with four flavors of dynamical quarks, using the HISQ action. We study the lattice spacing dependence of physical quantities in these simulations, using runs at several lattice spacings, but with the light quark mass held fixed at two tenths of the strange quark mass. We find that the lattice artifacts in the HISQ simulations are much smaller than those in the asqtad simulations at the same lattice spacings and quark masses. We also discuss methods for setting the scale, or assigning a lattice spacing to ensembles run at unphysical parameters.
description: Proceedings of the XXVIII International Symposium on Lattice Field Theory, Lattice2010
Smoothness of the Gap Function in the BCS-Bogoliubov Theory of Superconductivity
Creators: name: Watanabe, Shuji
Publisher: name: arXiv
Year: 2010
Subjects: subject: Mathematical Physics (math-ph)
subject: Superconductivity (cond-mat.supr-con)
subject: Classical Analysis and ODEs (math.CA)
subject: FOS: Physical sciences
subject: FOS: Mathematics
subject: 45G10, 82D55

description: We deal with the gap equation in the BCS-Bogoliubov theory of superconductivity, where the gap function is a function of the temperature $T$ only. We show that the squared gap function is of class $C^2$ on the closed interval $[\,0,\,T_c\,]$. Here, $T_c$ stands for the transition temperature. Furthermore, we show that the gap function is monotonically decreasing on $[0,\,T_c]$ and obtain the behavior of the gap function at $T=T_c$. We mathematically point out some more properties of the gap function.
description: 14 pages