cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Eulophia alta Fawc. & Rendle
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Liliopsida
Asparagales
Orchidaceae
Eulophia
Eulophia alta

description: Limodorum altum Linnaeus, Systema Naturae, ed. 12, 2: 594. 1767.
RCN: 6870.
 Lectotype (Fawcett & Rendle, Fl. Jamaica 1: 113. 1910): Herb. Linn. No. 1058.2 (LINN).
 Current name: Eulophia alta (L.) Fawc. & Rendle (Orchidaceae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part L), pp. 610-650 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 633, DOI: 10.5281/zenodo.291971
Regulatory role of glycerol in Candida albicans biofilm formation.
Creators: name: Jigar V  Desai
name: Bruno, Vincent M.
name: Shantanu  Ganguly
name: Stamper, Ronald J.
name: Mitchell, Kaitlin F.
name: Solis, Norma
name: Hill, Elizabeth M.
name: Wenjie  Xu
name: Filler, Scott G.
name: Andes, David R.
name: Saranna  Fanning
name: Lanni, Frederick
name: Mitchell, Aaron
Publisher: name: Carnegie Mellon University
Year: 2013
Subjects: subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: UNLABELLED: Biofilm formation by Candida albicans on medically implanted devices poses a significant clinical challenge. Here, we compared biofilm-associated gene expression in two clinical C. albicans isolates, SC5314 and WO-1, to identify shared gene regulatory responses that may be functionally relevant. Among the 62 genes most highly expressed in biofilms relative to planktonic (suspension-grown) cells, we were able to recover insertion mutations in 25 genes. Twenty mutants had altered biofilm-related properties, including cell substrate adherence, cell-cell signaling, and azole susceptibility. We focused on one of the most highly upregulated genes in our biofilm proles, RHR2, which specifies the glycerol biosynthetic enzyme glycerol-3-phosphatase. Glycerol is 5-fold-more abundant in biofilm cells than in planktonic cells, and an rhr2Δ/Δ strain accumulates 2-fold-less biofilm glycerol than does the wild type. Under in vitro conditions, the rhr2Δ/Δ mutant has reduced biofilm biomass and reduced adherence to silicone. The rhr2Δ/Δ mutant is also severely defective in biofilm formation in vivo in a rat catheter infection model. Expression profiling indicates that the rhr2Δ/Δ mutant has reduced expression of cell surface adhesin genes ALS1, ALS3, and HWP1, as well as many other biofilm-upregulated genes. Reduced adhesin expression may be the cause of the rhr2Δ/Δ mutant biofilm defect, because overexpression of ALS1, ALS3, or HWP1 restores biofilm formation ability to the mutant in vitro and in vivo. Our findings indicate that internal glycerol has a regulatory role in biofilm gene expression and that adhesin genes are among the main functional Rhr2-regulated genes. IMPORTANCE: Candida albicans is a major fungal pathogen, and infection can arise from the therapeutically intractable biofilms that it forms on medically implanted devices. It stands to reason that genes whose expression is induced during biofilm growth will function in the process, and our analysis of 25 such genes confirms that expectation. One gene is involved in synthesis of glycerol, a small metabolite that we find is abundant in biofilm cells. The impact of glycerol on biofilm formation is regulatory, not solely metabolic, because it is required for expression of numerous biofilm-associated genes. Restoration of expression of three of these genes that specify cell surface adhesins enables the glycerol-synthetic mutant to create a biofilm. Our findings emphasize the significance of metabolic pathways as therapeutic targets, because their disruption can have both physiological and regulatory consequences.
Indice et decomposition de Cartan d'une algebre de Lie semi-simple reelle
Creators: name: Moreau, Anne
Publisher: name: arXiv
Year: 2005
Subjects: subject: Representation Theory (math.RT)
subject: FOS: Mathematics
subject: 22E46; 22E15; 17B20; 20G05

description: The Iwasawa decomposition $\mathfrak{g}=\mathfrak{k}_0 \oplus \hat{\mathfrak{a}}_0 \oplus \mathfrak{n}_0$ of the real semisimple Lie algebra $\mathfrak{g}_0$ comes from its Cartan decomposition $\mathfrak{g}_0=\mathfrak{k}_0 \oplus \mathfrak{p}_0$. Then we get $\mathfrak{g}_0=\mathfrak{k}_0 \oplus \mathfrak{b}_0$ where $\mathfrak{b}_0=\hat{\mathfrak{a}}_0 \oplus \mathfrak{n}_0$. The question of knowing if the index were additive in the decomposition $\mathfrak{g}_0=\mathfrak{k}_0 \oplus \mathfrak{b}_0$ goes back M. Raïs \cite{Rais}. In \cite{Moreau3}, I wrote that the index always is additive for this decomposition. Precisly, I claim that the index of $\mathfrak{b}$ is given by the following formula : ${\rm ind} \mathfrak{b} = {\rm rk \} \mathfrak{g} - {\rm rk \} \mathfrak{k}$, where $\mathfrak{b}$ is the complexification of $\mathfrak{b}_0$. This result is false in general. We actually have an inequality : ${\rm ind} \mathfrak{b} \geq {\rm rg \} \mathfrak{g} - {\rm rg \} \mathfrak{k}$. The goal of this paper is to correct this mistake. We resume the approach of \cite{Moreau3} to obtain this time the previous inequality. Then we give in more a characterization of the semisimple real Lie algebra $\mathfrak{g}_0$ for which the index is additive in the decomposition $\mathfrak{g}_0=\mathfrak{k}_0 \oplus \mathfrak{b}_0$. Moreover, we study in this paper the quasi-reductive character of some subalgebras of $\mathfrak{g}$. This is a new part in comparison with \cite{Moreau3}.
description: 21 pages en francais
On the progenitor of SN 2005gl and the nature of Type IIn supernovae
Creators: name: Gal-Yam, Avishay
name: Leonard, D. C.
name: Fox, D. B.
name: Cenko, S. B.
name: Soderberg, A. M.
name: Moon, D. -S.
name: Sand, D. J.
name: Li, W.
name: Filippenko, A. V.
name: Aldering, G.
name: Copin, Y.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present a study of the type IIn supernova (SN) 2005gl, in the relatively nearby (d~66 Mpc) galaxy NGC 266. Photometry and spectroscopy of the SN indicate it is a typical member of its class. Pre-explosion Hubble Space Telescope (HST) imaging of the location of the SN, along with a precise localization of this event using the Laser-Guide-Star assisted Adaptive Optics (LGS-AO) system at Keck Observatory, are combined to identify a luminous (M_V=-10.3) point source as the possible progenitor of SN 2005gl. If the source is indeed a single star, it was likely a member of the class of luminous blue variable stars (LBVs). This finding leads us to consider the possible general association of SNe IIn with LBV progenitors. We find this is indeed supported by observations of other SNe, and the known properties of LBV stars. For example, we argue that should the prototypical Galactic LBV eta Carina explode in a phase similar to its current state, it will likely produce a type IIn SN. We discuss our findings in the context of current ideas about the evolution of massive stars, and review the census of SNe with identified progenitors. We introduce the concept of the progenitor-SN map as a convenient means to discuss the present status and future prospects of direct searches for SN progenitors. We conclude that this field has matured considerably in recent years, and the transition from anecdotal information about rare single events to robust associations of progenitor classes with specific SN types has already begun.
description: Submitted to ApJ. Comments welcome
Some inequalities for alternating Kurepa's function
Creators: name: Malesevic, Branko
Publisher: name: arXiv
Year: 2005
Subjects: subject: Complex Variables (math.CV)
subject: Number Theory (math.NT)
subject: FOS: Mathematics
subject: 26D15

description: In this paper we consider alternating Kurepa's function $A(z)$ \cite{Petojevic_02}. We give some recurrent relations for alternating Kurepa's function via appropriate sequences of rational functions and gamma function. Also we give some inequalities for the real part of alternating Kurepa's function $A(x)$ for values of argument $x>-2$. The obtained results are analogous to results from \cite{Malesevc_04}.
Urban Land Cover Classification with Missing Data Modalities Using Deep Convolutional Neural Networks
Creators: name: Kampffmeyer, Michael
name: Salberg, Arnt-Børre
name: Jenssen, Robert
Publisher: name: arXiv
Year: 2017
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: Automatic urban land cover classification is a fundamental problem in remote sensing, e.g. for environmental monitoring. The problem is highly challenging, as classes generally have high inter-class and low intra-class variance. Techniques to improve urban land cover classification performance in remote sensing include fusion of data from different sensors with different data modalities. However, such techniques require all modalities to be available to the classifier in the decision-making process, i.e. at test time, as well as in training. If a data modality is missing at test time, current state-of-the-art approaches have in general no procedure available for exploiting information from these modalities. This represents a waste of potentially useful information. We propose as a remedy a convolutional neural network (CNN) architecture for urban land cover classification which is able to embed all available training modalities in a so-called hallucination network. The network will in effect replace missing data modalities in the test phase, enabling fusion capabilities even when data modalities are missing in testing. We demonstrate the method using two datasets consisting of optical and digital surface model (DSM) images. We simulate missing modalities by assuming that DSM images are missing during testing. Our method outperforms both standard CNNs trained only on optical images as well as an ensemble of two standard CNNs. We further evaluate the potential of our method to handle situations where only some DSM images are missing during testing. Overall, we show that we can clearly exploit training time information of the missing modality during testing.
Agnostic Stacking of Intergalactic Doublet Absorption: Measuring the NeVIII Population
Creators: name: Frank, Stephan
name: Pieri, Matthew M.
name: Mathur, Smita
name: Danforth, Charles W.
name: Shull, J. Michael
Publisher: name: arXiv
Year: 2017
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We present a blind search for doublet intergalactic metal absorption with a method dubbed `agnostic stacking'. Using a forward-modelling framework we combine this with direct detections in the literature to measure the overall metal population. We apply this novel approach to the search for NeVIII absorption in a set of 26 high-quality COS spectra. We probe to an unprecedented low limit of log N$>$12.3 at 0.47$\leq z \leq$1.34 over a pathlength $Δ$z = 7.36. This method selects apparent absorption without requiring knowledge of its source. Stacking this mixed population dilutes doublet features in composite spectra in a deterministic manner, allowing us to measure the proportion corresponding to NeVIII absorption. We stack potential NeVIII absorption in two regimes: absorption too weak to be significant in direct line studies (12.3 $$ 13.7). We do not detect NeVIII absorption in either regime. Combining our measurements with direct detections, we find that the NeVIII population is reproduced with a power law column density distribution function with slope $β= -1.86 \substack{+0.18 \\ -0.26}$ and normalisation log $f_{13.7} = -13.99 \substack{+0.20 \\ -0.23}$, leading to an incidence rate of strong NeVIII absorbers $dn/dz =1.38 \substack{+0.97 \\ -0.82}$. We infer a cosmic mass density for NeVIII gas with 12.3 $
description: 17 pages, 12 figures. This is the version published in MNRAS - compared to the previous version, there is some new material in the discussion with regards to the effects of clustering for our analysis. Fig. 5 is updated
A possible analogy between the dynamics of a skydiver and a scalar field: cosmological consequences
Creators: name: Costa, F. E. M.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: The cosmological consequences of a slow rolling scalar field with constant kinetic term in analogy to the vertical movement of a skydiver after reaching terminal velocity are investigated. It is shown that the terminal scalar field hypothesis is quite realistic. In this approach, the scalar field potential is given by a quadratic function of the field. This model provides solutions in which the Universe was dominated in the past by a mixture of baryons and dark matter, is currently accelerating (as indicated by type Ia supernovae data), but will be followed by a contraction phase. The theoretical predictions of this model are consistent with current observations, therefore, a terminal scalar field is a viable candidate to dark energy.
description: Accepted for publication
Photon Emission from Dense Quark Matter
Creators: name: Vogt, C.
name: Rapp, R.
name: Ouyed, R.
Publisher: name: arXiv
Year: 2003
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Thermal emission rates and mean free paths of photons in a color-flavor locked (CFL) phase of quark matter at high densities and moderate temperatures are evaluated. Our calculations are based on a low-energy effective theory for CFL matter describing Goldstone boson excitations and their electromagnetic as well as strong interactions. In-medium coupling strengths of vector mesons are found to be smaller than in vacuum. As a consequence of in-medium modified pion dispersion relations, novel processes such as pi+ pi- -> gamma and gamma -> pi+ pi- become possible. The total photon emissivity is found to be very large, exceeding contributions from thermal e+ e- annihilation above temperatures of about 5 MeV. At the same time, the corresponding mean free paths become very small. Our results imply that the photon flux from the surface of a (hypothetical) CFL star in its early hot stages saturates the black-body limit. Estimates for the early thermal evolution of the star are also presented.
description: 20 pages latex, 5 figures; v2: Figs.1 + 2 corrected, references added, minor revisions in text, conclusions unchanged, to appear in Nucl. Phys. A
Regulatory divergence in Drosophila revealed by mRNA-seq.
Creators: name: C. Joel McManus
name: Coolon, Joseph D.
name: Duff, Michael O.
name: Eipper-Mains, Jodi
name: Graveley, Brenton R.
name: Wittkopp, Patricia J.
Publisher: name: Carnegie Mellon University
Year: 2010
Subjects: subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: The regulation of gene expression is critical for organismal function and is an important source of phenotypic diversity between species. Understanding the genetic and molecular mechanisms responsible for regulatory divergence is therefore expected to provide insight into evolutionary change. Using deep sequencing, we quantified total and allele-specific mRNA expression levels genome-wide in two closely related Drosophila species (D. melanogaster and D. sechellia) and their F(1) hybrids. We show that 78% of expressed genes have divergent expression between species, and that cis- and trans-regulatory divergence affects 51% and 66% of expressed genes, respectively, with 35% of genes showing evidence of both. This is a relatively larger contribution of trans-regulatory divergence than was expected based on prior studies, and may result from the unique demographic history of D. sechellia. Genes with antagonistic cis- and trans-regulatory changes were more likely to be misexpressed in hybrids, consistent with the idea that such regulatory changes contribute to hybrid incompatibilities. In addition, cis-regulatory differences contributed more to divergent expression of genes that showed additive rather than nonadditive inheritance. A correlation between sequence similarity and the conservation of cis-regulatory activity was also observed that appears to be a general feature of regulatory evolution. Finally, we examined regulatory divergence that may have contributed to the evolution of a specific trait--divergent feeding behavior in D. sechellia. Overall, this study illustrates the power of mRNA sequencing for investigating regulatory evolution, provides novel insight into the evolution of gene expression in Drosophila, and reveals general trends that are likely to extend to other species.
Quasinormal Modes of Modified Gravity (MOG) Black Holes
Creators: name: Manfredi, Luciano
name: Mureika, Jonas
name: Moffat, John
Publisher: name: arXiv
Year: 2017
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: The Quasinormal modes (QNMs) for gravitational and electromagnetic perturbations are calculated in a Scalar-Tensor-Vector (Modified Gravity) spacetime, which was initially proposed to obtain correct dynamics of galaxies and galaxy clusters without the need for dark matter. It is found that for the increasing model parameter $α$, both the real and imaginary parts of the QNMs decrease compared to those for a standard Schwarzschild black hole. On the other hand, when taking into account the $1/(1+α)$ mass re-scaling factor present in MOG, Im($ω$) matches almost identically that of GR, while Re($ω$) is higher. These results can be identified in the ringdown phase of massive compact object mergers, and are thus timely in light of the recent gravitational wave detections by LIGO.
How to be FAIR when you CARE: The DGS Corpus as a Case Study of Open Science Resources for Minority Languages
Creators: name: Schulder, Marc
name: Hanke, Thomas
Publisher: name: Universität Hamburg
Year: 2022
Subjects: FAIR
CARE
Language Data Ethics
Sign Languages

description: Poster presentation for the sign-lang@LREC 2022 paper "How to be FAIR when you CARE: The DGS Corpus as a Case Study of Open Science Resources for Minority Languages". Outlines how the DGS-Korpus project follows the FAIR and CARE principles in the creation of the DGS Corpus and its public portals MY DGS and MY DGS – annotated.
description: {"references": ["Wilkinson, Mark D. et al. (2016). \"The FAIR Guiding Principles for scientific data manage- ment and stewardship\". In: Scientific Data 3, p. 160018. issn: 2052-4463.", "Carroll, Stephanie Russo et al. (2020). \"The CARE Principles for Indigenous Data Gover- nance\". In: Data Science Journal 19.1, p. 43. issn: 1683-1470."]}
Neural Networks for Predicting Algorithm Runtime Distributions
Creators: name: Eggensperger, Katharina
name: Lindauer, Marius
name: Hutter, Frank
Publisher: name: arXiv
Year: 2017
Subjects: subject: Artificial Intelligence (cs.AI)
subject: Machine Learning (cs.LG)
subject: FOS: Computer and information sciences

description: Many state-of-the-art algorithms for solving hard combinatorial problems in artificial intelligence (AI) include elements of stochasticity that lead to high variations in runtime, even for a fixed problem instance. Knowledge about the resulting runtime distributions (RTDs) of algorithms on given problem instances can be exploited in various meta-algorithmic procedures, such as algorithm selection, portfolios, and randomized restarts. Previous work has shown that machine learning can be used to individually predict mean, median and variance of RTDs. To establish a new state-of-the-art in predicting RTDs, we demonstrate that the parameters of an RTD should be learned jointly and that neural networks can do this well by directly optimizing the likelihood of an RTD given runtime observations. In an empirical study involving five algorithms for SAT solving and AI planning, we show that neural networks predict the true RTDs of unseen instances better than previous methods, and can even do so when only few runtime observations are available per training instance.
A note on knot Floer homology of links
Creators: name: Ni, Yi
Publisher: name: arXiv
Year: 2005
Subjects: subject: Geometric Topology (math.GT)
subject: Symplectic Geometry (math.SG)
subject: FOS: Mathematics
subject: 53D40, 57R58, 57M27, 57R30

description: Ozsvath and Szabo proved that knot Floer homology determines the genera of knots in S^3. We will generalize this deep result to links in homology 3-spheres, by adapting their method. Our proof relies on a result of Gabai and some constructions related to foliations. We also interpret a theorem of Kauffman in the world of knot Floer homology, hence we can compute the top filtration term of the knot Floer homology for alternative links.
description: This is the version published by Geometry & Topology on 21 June 2006 (V4: typesetting corrections)
Between Codes and Palimpsest: Stephanie Strickland's Dragon Logic
Creators: name: Pournara, Lizzy
Publisher: name: Ex-centric Narratives: Journal of Anglophone Literature, Culture and Media
Year: 2019

description: This article will study the impact of programming languages on poetic language in Stephanie Strickland’s print poetry collection Dragon Logic (2013). In this article, I argue that Dragon Logic not only ponders on the changes that occur in contemporary literature with the invasion of digital technologies, but it also articulates via the use of the print form certain concerns relating to the electronic, and finally helps readers reinvent the way one reads a print book. This article follows the theoretical insights provided by N. Katherine Hayles about the connection of natural language and computer code, as well as the different reading practices that are brought forward by computation. Through a selection of close readings of poems in Dragon Logic, I will discuss the layering of codes and how this layering affects the ways natural language is informed by programming language via feedback loops, a process that by extension influences not only human readers but also reading machines.
description: Ex-centric Narratives: Journal of Anglophone Literature, Culture and Media, No 3 (2019): Identity Broodings in Chicana/o Studies & Other Essays
Regulative deployment of the skeletogenic gene regulatory network during sea urchin development.
Creators: name: Sharma, Tara
name: Ettensohn, Charles A.
Publisher: name: Carnegie Mellon University
Year: 2011
Subjects: subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: The well-known regulative properties of the sea urchin embryo, coupled with the recent elucidation of gene regulatory networks (GRNs) that underlie cell specification, make this a valuable experimental model for analyzing developmental plasticity. In the sea urchin, the primary mesenchyme cell (PMC) GRN controls the development of the embryonic skeleton. Remarkably, experimental manipulations reveal that this GRN can be activated in almost any cell of the embryo. Here, we focus on the activation of the PMC GRN during gastrulation by non-skeletogenic mesoderm (NSM) cells and by endoderm cells. We show that most transfating NSM cells are prospective blastocoelar cells, not prospective pigment cells, as was previously believed. Earlier work showed that the regulative deployment of the GRN, unlike its deployment in the micromere-PMC lineage, is independent of the transcriptional repressor Pmar1. In this work, we identify several additional differences in the upstream regulation of the GRN during normal and regulative development. We provide evidence that, despite these changes in the upstream regulation of the network, downstream regulatory genes and key morphoregulatory genes are deployed in transfating NSM cells in a fashion that recapitulates the normal deployment of the GRN, and which can account for the striking changes in migratory behavior that accompany NSM transfating. Finally, we report that mitotic cell division is not required for genomic reprogramming in this system, either within a germ layer (NSM transfating) or across a germ layer boundary (endoderm transfating).
Measuring M dwarf Winds with DAZ White Dwarfs
Creators: name: Debes, J. H.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Hydrogen atmosphere white dwarfs with metal lines, so-called DAZs, show evidence for ongoing accretion of material onto their surfaces. Some DAZs are known to have unresolved M dwarf companions, which could account for the observed accretion through a stellar wind. I combine observed Ca abundances of the DAZs with information on the orbital separation of their M dwarf companions to infer the mass loss rate of the M dwarfs. I find that for three of the six known DAZs with M dwarf companions, a stellar wind can plausibly explain the observed accretion on the white dwarfs assuming Bondi-Hoyle accretion of solar abundance stellar winds on the order of 10$^{-14}-10^{-16}\Msun$ yr$^{-1}$. The rest of the sample have companions with orbits $\gtorder$ 1~AU, and require companion mass loss rates of $> 10^{-11}\Msun$ yr$^{-1}$. I conclude that there must be an alternative explanation for accretion of material onto DAZs with widely separated companions. The inferred winds for two of the close binaries are orders of magnitude smaller than typically assumed for the angular momentum loss of red dwarf-white dwarf pairs due to magnetic braking from a stellar wind and may seriously affect predictions for the formation rate of CVs with low mass companions.
description: 18 pages, 3 figures, accepted to ApJ
Magnetic Field Effect on Charged Scalar Pair Creation at Finite Temperature
Creators: name: Piccinelli, Gabriella
name: Sanchez, Angel
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: In this work we explore the effects of a weak magnetic field and a thermal bath on the decay process of a neutral scalar boson into two charged scalar bosons. Our findings indicate that magnetic field inhibits while temperature enhances the pair production. The employed formalism allows us to isolate the contribution of magnetic fields in vacuum, leading to a separate analysis of the effects of different ingredients. This is essential since the analytical computation of the decay width necessarily needs of some approximation and the results that can be found in the literature are not always coincident. We perform the calculation in vacuum by two different weak field approximations. The particle pair production in vacuum was found to coincide with finite temperature behavior, which is opposite to results obtained by other authors in scenarios that involve neutral particles decaying into a pair of charged fermions. Among other differences between these scenarios, we traced that the analytical structure of the self-energy imposed by the spin of particles involved in the process is determinant in the behavior of the decay rate with the magnetic field.
description: 12 pages, 8 figures
title: ADCO, Ordre cistercien : comptes (1499-1515) (11 H 1162), f. 00391
Creators: name: de la Côte-d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CBMA/CG21/F.PETOT/2019
name: Petot, Frédéric
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: comptes
subject: Corpus Burgundiae Medii Aevi
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Chartes de la Bourgogne du Moyen Âge

description: Ordre cistercien : comptes (1499-1515), Archives départementales de la Côte-d'Or, (11 H 1162). Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Ordre cistercien : comptes (1499-1515), Archives départementales de la Côte-d'Or, (11 H 1162), f. 00391, in Projet CBMA - Corpus Burgundiae Medii Aevi \[Ressource en ligne\], https:// manuscrits.cbma-project.eu/
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
Calopogon tuberosa Britton
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Liliopsida
Asparagales
Orchidaceae
Calopogon
Calopogon tuberosa

description: Limodorum tuberosum Linnaeus, Species Plantarum 2: 950. 1753.
"Habitat in America septentrionali." RCN: 6869.
 Lectotype (Mackenzie in Rhodora 27: 194. 1925): Clayton 76 (BM-000051136).
 Generitype of Limodorum Linnaeus, nom. rej.
 Current name: Calopogon tuberosa (L.) Britton & al. (Orchidaceae).
 Note: Limodorum Linnaeus, nom. rej. against Limodorum Boehm. Calopogon R. Br. is a conserved name.
 Fernald (in Rhodora 23: 132. 1921) stated that this "rests chiefly upon and draws its specific name directly from … Martyn t. 50". However, we believe that this is insufficiently precise to be accepted as a valid typification (which is fortunate as the illustration is of Bletia purpurea (Lam.) DC.). Luer (Native Orch. Florida: 58. 1972) and Boivin (in Phytologia 42: 397. 1979) follow Mackenzie.
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part L), pp. 610-650 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 633, DOI: 10.5281/zenodo.291971
Jet Tomography Studies in AuAu Collision at RHIC Energies
Creators: name: Barnafoldi, G. G.
name: Levai, P.
name: Papp, G.
name: Fai, G.
name: Gyulassy, M.
Publisher: name: arXiv
Year: 2003
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Recent RHIC results on pion production in AuAu collision at sqrt(s)=130 and 200 AGeV display a strong suppression effect at high p_T. This suppression can be connected to final state effects, namely jet energy loss induced by the produced dense colored matter. Applying our pQCD-based parton model we perform a quantitative analysis of the measured suppression pattern and determine the opacity of the produced deconfined matter.
description: Talk given at European Physical Society International Europhysics Conference on High Energy Physics HEP2003, July 17-23. 2003, in Aachen, Germany 3 pages in LaTeX, 2 EPS figure. (Accepted for publication in European Physical Journal C direct)
The Waste/d Spaces of Ruth Ozeki's A Tale for the Time Being
Creators: name: Adams, Bella
Publisher: name: Ex-centric Narratives: Journal of Anglophone Literature, Culture and Media
Year: 2019

description: "How do you deal with a reality that is so overwhelming and so devastating with the tool of fiction?" asked Ruth Ozeki of the earthquake, tsunami and nuclear meltdown in Japan's Pacific Northeast on and after March 11, 2011. A Tale for the Time Being offers a response to this question by dramatizing how the spatialized figure of the container that informs dominant views of the disaster, the human subject and the literary object has been undermined. Paradoxically perhaps, Ozeki's tale deploys a container in the form of a plastic lunchbox to testify to the impossibility of containment. This particular piece of disaster debris has made its way across the ocean to the Pacific Northwest, to the obvious dismay of many of her Canadian characters when it washes up on their local beach. On seeing the disaster debris from Japan for herself, not far from her Canadian island home, Ozeki says it represents "such a visual and material enactment—evidence that the planet is really small, and we are all radically interconnected" by human, plastic and nuclear waste that is a whole lot livelier than the containers for which it was intended. A Tale for the Time Being exposes this liveliness, or, in new materialist terms, "vital materiality" for the purposes of critique and care.
description: Ex-centric Narratives: Journal of Anglophone Literature, Culture and Media, No 3 (2019): Identity Broodings in Chicana/o Studies & Other Essays
How Much Top-Down and Bottom-Up do We Need to Build a Lemmatized Corpus?
Creators: name: Konrad, Reiner
name: Langer, Gabriele
name: König, Susanne
name: Nishio, Rie
Publisher: name: Universität Hamburg
Year: 2010
Subjects: sign language
corpus building
lemmatisation
lemma revision

description: Building a lemmatised corpus of German Sign Language (DGS) using iLex; lemmatisation as top-down and lexicon building as bottom-up process; lemma revision
Reconstructing tumor phylogenies from heterogeneous single-cell data.
Creators: name: Pennington, Gregory
name: Smith, Charles A.
name: Shackney, Stanley E.
name: Schwartz, Russell
Publisher: name: Carnegie Mellon University
Year: 2007
Subjects: subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Studies of gene expression in cancerous tumors have revealed that tumors presenting indistinguishable symptoms in the clinic can be substantially different entities at the molecular level. The ability to distinguish between these genetically distinct cancers will make possible more accurate prognoses and more finely targeted therapeutics, provided we can characterize commonly occurring cancer sub-types and the specific molecular abnormalities that produce them. We develop a new method for identifying these common tumor progression pathways by applying phylogeny inference algorithms to single-cell assays, taking advantage of information on tumor heterogeneity lost to prior microarray-based approaches. We combine this approach with expectation maximization to infer unknown parameters used in the phylogeny construction. We further develop new algorithms to merge inferred trees across different assays. We validate the expectation maximization method on simulated data and demonstrate the combined approach on a set of fluorescent in situ hybridization (FISH) data measuring cell-by-cell gene and chromosome copy numbers in a large sample of breast cancers. The results further validate the proposed computational methods by showing consistency with several previous findings on these cancers and provide novel insights into the mechanisms of tumor progression in these patients.
The Boundaries of Spatial Separation: The Concept of Hospitality in the Philosophy of Emmanuel Levinas
Creators: name: Langenthal, Edna
Publisher: name: Ex-centric Narratives: Journal of Anglophone Literature, Culture and Media
Year: 2019

description: This paper seeks to enrich our ethical understanding of the built environment, planning, and urban policy by drawing on the philosophy of Emmanuel Levinas, particularly his concept of hospitality. Levinas maintains that hospitality has an ethical meaning since it entails welcoming the other into one's home while simultaneously respecting his strangeness. However, being hospitable puts the host in a vulnerable state vis-a-vis his guest. This ethical insight leads us to question the significance of the façade of a building as a flat exterior that frames or represents the contents of a building. Although Levinas does not explicitly make this connection, I argue that the facade preserves the tension between the tendency of the house to draw its inhabitants inwards, and the event of welcoming a guest, who is introduced from the outside. This double movement suggests that the facade is a boundary. Boundaries are places of tension and conflict; however, these very qualities present the opportunity for the facade to be a space of hospitality.
description: Ex-centric Narratives: Journal of Anglophone Literature, Culture and Media, No 3 (2019): Identity Broodings in Chicana/o Studies & Other Essays
Resolution of Singularities of Vector Fields in Dimension Three
Creators: name: Panazzolo, Daniel
Publisher: name: arXiv
Year: 2005
Subjects: subject: Algebraic Geometry (math.AG)
subject: Classical Analysis and ODEs (math.CA)
subject: FOS: Mathematics
subject: 14E15; 34C05; 58F14

description: Let X be an analytic vector field defined in a real analytic manifold of dimension three. We prove that all the singularities of X can be made elementary by a finite number of blowing-ups in the ambient space. New version: Some misprints have been corrected and the text have been slightly reorganized. The final version appears in Acta Mathematica -Volume 197, Number 2, 167-289.
description: 100 pages, 28 figures
An Analysis of the Value of Information when Exploring Stochastic, Discrete Multi-Armed Bandits
Creators: name: Sledge, Isaac J.
name: Principe, Jose C.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Artificial Intelligence (cs.AI)
subject: Machine Learning (cs.LG)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: In this paper, we propose an information-theoretic exploration strategy for stochastic, discrete multi-armed bandits that achieves optimal regret. Our strategy is based on the value of information criterion. This criterion measures the trade-off between policy information and obtainable rewards. High amounts of policy information are associated with exploration-dominant searches of the space and yield high rewards. Low amounts of policy information favor the exploitation of existing knowledge. Information, in this criterion, is quantified by a parameter that can be varied during search. We demonstrate that a simulated-annealing-like update of this parameter, with a sufficiently fast cooling schedule, leads to an optimal regret that is logarithmic with respect to the number of episodes.
description: Entropy
Electronic LiteratureS as Postcomparative Media
Creators: name: Ensslin, Astrid
name: Roy, Samya Brata
Publisher: name: Universität Regensburg
Year: 2023
Subjects: subject: Electronic literature, electronic literatureS, postcomparative media, accessibleism, ableism, India
subject: 793 Spiel
subject: 800 Literatur, Rhetorik, Literaturwissenschaft

description: This article examines electronic literatureS as postcomparative media: a pluralistic, fluid phenomenon that questions the political implications, selective regimes, and analytical practices inherent in institutionalised e-literary practices. Exposing the technopositivist, ableist and accessibleist tendencies of skills-based approaches, we showcase our intersectional and co-relational approach by auto-narrating developments in India’s emergent, subalternative e-literary media ecology.
Parallels and Interactions between Videogames and Literature: Analyzing Harlan Ellison’s I Have No Mouth and I Must Scream
Creators: name: Vasilikaris, George
Publisher: name: Ex-centric Narratives: Journal of Anglophone Literature, Culture and Media
Year: 2019

description: Abstract Many people argue that stories can be experienced by audiences through very specific mediums such as films or books. This paper will diverge from the beaten track and introduce its readers to the contemporary and interactive medium of videogames, hopefully establishing it as a form of art in their consciousness. In an attempt to prove the academic, as well as philosophical, value of videogames; this paper will compare Harlan Ellison’s award winning short story I Have No Mouth, and I Must Scream (1967) with its 1995 videogame adaptation, in terms of plot, characters, narrative and the ability to convey feelings. Last but not least, we will analyse the hidden philosophy of videogames, shedding light on the different ways they can be “read” and the conflict that rages on about it, but more importantly answer the fundamental question: “Why do we play videogames?”
description: Ex-centric Narratives: Journal of Anglophone Literature, Culture and Media, No 3 (2019): Identity Broodings in Chicana/o Studies & Other Essays
The Good Wife's Representation of Women in the Political and Legal Realms: Balancing Expectations
Creators: name: Popović, Ana
Publisher: name: Ex-centric Narratives: Journal of Anglophone Literature, Culture and Media
Year: 2019

description: CBS's The Good Wiferepresents a new model of strong female leads in American television series. While television series have traditionally presented normative femininities, the new generation of political and legal dramas on premium television offers a variety of complex characters more responsive to the realities of contemporary society. The model introduced by Alicia Florrick, The Good Wife'sprotagonist, is analyzed in this paper as exemplary of the conflict between the public and private domains that today's working mothers face. Alicia's happiness is compromised as she tries to recover her identity as both a mother and a lawyer, while at the same time trying to maintain her public image as a political figure. Additional burden to this struggle is added by the disagreement between generations of feminists on what constituted happiness and success. This paper analyzes the individualized way in which a representative of the post-feminist generation tackles this issue and delivers a powerful message about the impossibility to reach balance in a flawed social environment that limits female freedom.
description: Ex-centric Narratives: Journal of Anglophone Literature, Culture and Media, No 3 (2019): Identity Broodings in Chicana/o Studies & Other Essays
Seasoning the Novel: Mark Z. Danielewski's The Familiar
Creators: name: Mantzaris, Thomas
name: Marazi, Katerina
Publisher: name: Ex-centric Narratives: Journal of Anglophone Literature, Culture and Media
Year: 2019

description: The present article examines Mark Z. Danielewski’s book series The Familiar (2015-) by drawing upon the affordances of TV series and the practices of multimodal literature that the author has adopted in the creation of his novels. The scale of the project and the breadth of experimentation with verbal and non-verbal elements on the surface of the pages leads to a reconsideration of literary production not only in terms of the final outcome, but also in terms of the process employed. The launching of Danielewski’s ambitious 27-volume enterprise coincides with a moment in TV production that features a turn towards fewer episodes per season, signaling an alteration in TV practices which, together with other factors such as the audience engagement pursued and the literacy skills that the terrain of the novels requires, have led The Familiar to a pause.
description: Ex-centric Narratives: Journal of Anglophone Literature, Culture and Media, No 3 (2019): Identity Broodings in Chicana/o Studies & Other Essays
Limonia acidissima Linnaeus 1762
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Sapindales
Rutaceae
Limonia
Limonia acidissima

description: Limonia acidissima Linnaeus, Species Plantarum, ed. 2, 1: 554. 1762.
"Habitat in India." RCN: 3054.
 Replaced synonym: Schinus limonia L. (1753).
 Lectotype (Tanaka in Meded. Rijks-Herb. 69: 8. 1931): Herb. Hermann 1: 76, No. 175 (BM-000594508).
 Generitype of Limonia Linnaeus.
 Current name: Limonia acidissima L. (Rutaceae).
 Note: Panigrahi (in Taxon 26: 577. 1977) proposed the name for rejection but Stone & Nicolson (in Taxon 27: 551. 1979) argued against this. The Committee for Spermatophyta (in Taxon 31: 540. 1982) declined Panigrahi’s rejection proposal.
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part L), pp. 610-650 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 633, DOI: 10.5281/zenodo.291971
Reconciliation with non-binary species trees.
Creators: name: Vernot, Benjamin
name: Stolzer, Maureen
name: Aiton  Goldman
name: Durand, Dannie
Publisher: name: Carnegie Mellon University
Year: 2008
Subjects: subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Reconciliation extracts information from the topological incongruence between gene and species trees to infer duplications and losses in the history of a gene family. The inferred duplication-loss histories provide valuable information for a broad range of biological applications, including ortholog identification, estimating gene duplication times, and rooting and correcting gene trees. While reconciliation for binary trees is a tractable and well studied problem, there are no algorithms for reconciliation with non-binary species trees. Yet a striking proportion of species trees are non-binary. For example, 64% of branch points in the NCBI taxonomy have three or more children. When applied to non-binary species trees, current algorithms overestimate the number of duplications because they cannot distinguish between duplication and incomplete lineage sorting. We present the first algorithms for reconciling binary gene trees with non-binary species trees under a duplication-loss parsimony model. Our algorithms utilize an efficient mapping from gene to species trees to infer the minimum number of duplications in O(|V(G) | x (k(S) + h(S))) time, where |V(G)| is the number of nodes in the gene tree, h(S) is the height of the species tree and k(S) is the size of its largest polytomy. We present a dynamic programming algorithm which also minimizes the total number of losses. Although this algorithm is exponential in the size of the largest polytomy, it performs well in practice for polytomies with outdegree of 12 or less. We also present a heuristic which estimates the minimal number of losses in polynomial time. In empirical tests, this algorithm finds an optimal loss history 99% of the time. Our algorithms have been implemented in NOTUNG, a robust, production quality, tree-fitting program, which provides a graphical user interface for exploratory analysis and also supports automated, high-throughput analysis of large data sets.
Space, Narrative and Digital Media in Teju Cole’s Open City
Creators: name: Feleki, Despoina N.
Publisher: name: Ex-centric Narratives: Journal of Anglophone Literature, Culture and Media
Year: 2019

description: This article explores the metaphor of the novel as the actual “space” for creative expression to take place. It is “space” affected by social and technological developments, employed to “house” global concerns and perspectives. In this article, I intend to investigate the ways in which Teju Cole, an American writer of Nigerian descent, communicates his concerns to his audience and explores questions about crises and debates, responding to social, cultural, and technological challenges of the twenty-first century both in print and electronic spaces. In particular, I investigate the ways in which Cole employs both narrative fiction and Social Media as political space in order to comment on twenty-first century events like 9/11, global terrorism, and a renewed wave of racism. Key-words: narrative, social media, political, activist, 9/11
description: Ex-centric Narratives: Journal of Anglophone Literature, Culture and Media, No 3 (2019): Identity Broodings in Chicana/o Studies & Other Essays