cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
The evolution and ecology of floral colour in the biological partnership of flowering plants and pollinators
Creators: name: Shrestha, Mani
Publisher: name: Monash University
Year: 2017
Subjects: Uncategorized

description: Plant-pollinator interactions have a very important role in the reproductive cycle of flowering plants. Plants typically provide small amounts of nutrition for animal pollinators, and pollinators incidentally transfer pollen between flowers to enable sexual reproduction. Despite the apparent simplicity, this type of interaction is very complex. Colour is a major cue used for signalling by flowers. I investigated floral spectral signals, as perceived as colour by a pollinator’s visual perception, the phylogenetic pattern of colour signal evolution, and the signal-receiver relationship in two natural communities in Victoria, Australia, and over an altitudinal gradient in Nepal. From this study, I found that bird-visited flowers and insect-visited flowers differ significantly from each other in their respective chromatic cues. These differences are concentrated near wavelengths of optimal colour discrimination for the respective pollinators. Further investigation considering a steep altitudinal gradient of Nepal Himalaya provides evidence that species in subtropical vegetation had colours significantly less dispersed in a bee-vision colour space than expected by chance, while subalpine species had significantly greater colour dispersion than expected by chance. I found that at both low altitude sub-tropical and high altitude sub-alpine regions of Nepal, flowers had spectral signals that closely matched the regions of best colour discrimination by hymenopteran trichromatic pollinators. This finding is somewhat surprising because hymenopteran pollinators, especially bees, tend to decline in abundance with increasing altitude, while flies become relatively more abundant and are thought to be important pollinators at high elevation. Next I investigated the similarity of floral colours in orchids and non-orchids species as perceived by insect pollinators. Surprisingly, there was no congruency between phylogeny and position in a colour space, showing that floral colours were highly labile traits in the evolution for both orchids and non-orchids. Finally, I addressed the question about role of flower colour in two natural communities in Australia and found that fruit sets of focal plant species increased in the presence of neighbouring flowering plants. Thus the presence of co-flowering plants appears to facilitate the pollination of other species in the communities studied
Violence Victimization and Depressive Symptoms Among a Sub-Sample of Sexual and Gender Minority Adults in a Population-Based South African Study.
Creators: name: Hatcher, Abigail
name: Mkhize, Sthembiso Pollen
name: Metheny, Nicholas
name: Scott, Dalton
Publisher: name: SAGE Publications
Year: 2024

description: Sexual and gender minority (SGM) adults in South Africa face high levels of violence and poor mental health outcomes. Interventions to prevent these negative health implications are hampered by a lack of representative data among this population. This study aims to quantify the associations between three forms of violent victimization and depressive symptoms in a sub-sample of SGM drawn from a population-based cross-sectional study in Gauteng, South Africa. Data come from the sixth Quality of Life survey conducted in South Africa's Gauteng province. Brief screeners assessed childhood sexual abuse (CSA), past-year intimate partner violence (IPV), non-partner violence, and depressive symptoms. Three survey-weighted logistic regression analyses were fit to model associations between elevated depressive symptoms and CSA, past-year IPV, and past-year non-partner violence, controlling for socio-demographics (age, race, sex, area of residence, education, socioeconomic status, and recent employment). N = 1,328 SGM respondents were included. Over 40% (n = 537) reported depressive symptoms, while 17% (n = 222) reported CSA, 5% (n = 67) reported IPV, and 16% (n = 208) reported non-partner violence. CSA and non-partner violence were associated with significantly higher odds of reporting depressive symptoms (aOR: 1.51, 95% CI [1.03, 2.23]; aOR: 1.84, [1.24, 2.73], respectively). IPV was not associated with elevated depressive symptoms (aOR: 1.17, [0.64, 2.16]). In all models, employment in the past 7 days was associated with significantly lower odds of reporting depressive symptoms. Recent and childhood violence is a major burden that is associated with elevated symptoms of depression among SGM in urban South Africa. Community-tailored interventions and policy-related advocacy related to employment and violence prevention may alleviate depressive symptoms in SGM adults in Gauteng.
Additional file 3: of Online advertising and marketing claims by providers of proton beam therapy: are they guideline-based?
Creators: name: Corkum, Mark
name: Liu, Wei
name: Palma, David
name: Bauman, Glenn
name: Dinniwell, Robert
name: Warner, Andrew
name: Mishra, Mark
name: Louie, Alexander
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Pharmacology
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences

description: Appendix C: Proportion of All Disease Sites Mentioned on Proton Therapy Centre Websites. (DOCX 21 kb)
MOESM10 of Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.)
Creators: name: Deng, Qian-Wen
name: Luo, Xiang-Dong
name: Chen, Ya-Ling
name: Zhou, Yi
name: Zhang, Fan-Tao
name: Hu, Biao-Lin
name: Xie, Jian-Kun
Publisher: name: figshare
Year: 2018
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Mental Health
subject: Plant Biology
subject: Computational Biology

description: Additional file 10: Table S9. Significant GO terms of DEGs in the biological process, cellular component and molecular function category for LLP vs. LCK.
The Digital Logic of Death
Creators: name: Pustay, Steven
Publisher: name: Georgia State University
Year: 2015

description: The Digital Logic of Death analyzes recent reconfigurations in our relationship to death which have emerged in response to the rupture of the digital, as glimpsed through the films, television shows, and digital games which so often inform and influence our understanding of mortality. Considered as both a series of technological advancements and a new set of cultural assumptions, this project argues that the digital cannot but shift our understanding of death in general, and our recognition of our own finiteness in particular. As such, it presents four observations about the appearance, function, and conception of death in contemporary moving images. First, that our dissatisfaction with inaccurate representations of death and increased interest in autonomous simulations reveals an attempt to reinstate the knowledge and painful pleasure once found only through witnessing the death of others. Second, that the seemingly inconsequential nature of death in digital games ? where the traumatic is easily rewound and re-animated ? serves not to deny death but rather to make it more present, providing an opportunity for gameplayers to contemplate and craft their own unique ?path to death.? Third, that contemporary society, engulfed in the binary logic of the digital, has come to fetishize the frightening possibility of death at the expense of recognizing its potential impact on our lives and culture, leading to experiential relays through which we attempt to reencounter that potential, namely a narrative Being-towards-death and a splitting of subjectivity into actual and virtual components with their own relationship to mortality. And fourth, that contemporary narratives of seemingly ?immortal,? artificially-intelligent machines are concerned less with the fantasy of immortality than they are with what it means to be mortal, thereby positioning death as the most essential and fundamental component of the human experience. Together, these observations look to renew an existential undercurrent of critical theory, phenomenology, psychoanalysis, and metaphysics, which has the potential to greatly inform key conversations in film and media studies, cultural studies, and posthumanism, as well as the capacity to reveal the essential argument of the digital logic of death: that to be human is to know that you will die.
A classification of nonexpansive Bratteli-Vershik systems
Creators: name: Petersen, Karl
name: Shields, Sandi
Publisher: name: American Institute of Mathematical Sciences (AIMS)
Year: 2024

description: We study simple, properly ordered nonexpansive Bratteli-Vershik (BV) systems. Correcting a mistake in an earlier paper, we redefine the classes standard nonexpansive (SNE) and strong standard nonexpansive (SSNE). We define also the classes of very well timed and well timed systems, their opposing classes of untimed and very untimed systems (which feature, as subclasses of "Case (2)", in the work of Downarowicz and Maass as well as Hoynes on expansiveness of BV systems of finite topological rank), and several related classes according to the existence of indistinguishable pairs (of some "depth") and their synchronization ("common cuts"). We establish some properties of these types of systems and some relations among them. We provide several relevant examples, including a problematic one that is conjugate to a well timed system while also (vacuously) in the classes "Case (2)". We prove that the class of all simple, properly ordered nonexpansive BV  systems is the disjoint union of the ones conjugate to well timed systems and those conjugate to untimed systems, thereby showing that nonexpansiveness in BV systems arises in one of two mutually exclusive ways.
Central Neuromodulators in Irritable Bowel Syndrome: Why, How, and When
Creators: name: Hanna-Jairala, Ignacio
name: Drossman, Douglas A.
Publisher: name: Wolters Kluwer
Year: 2024

description: Irritable bowel syndrome (IBS) is responsive to treatments using central neuromodulators. Central neuromodulators work by enhancing the synaptic transmission of 5-hydroxytryptamine, noradrenalin, and dopamine, achieving a slower regulation or desensitization of their postsynaptic receptors. Central neuromodulators act on receptors along the brain-gut axis, so they are useful in treating psychiatric comorbidities, modifying gut motility, improving central downregulation of visceral signals, and enhancing neurogenesis in patients with IBS. Choosing a central neuromodulator for treating IBS should be according to the pharmacological properties and predominant symptoms. The first-line treatment for pain management in IBS is using tricyclic antidepressants. An alternative for pain management is the serotonin and noradrenaline reuptake inhibitors. Selective serotonin reuptake inhibitors are useful when symptoms of anxiety and hypervigilance are dominant but are not helpful for treating abdominal pain. The predominant bowel habit is helpful when choosing a neuromodulator to treat IBS; selective serotonin reuptake inhibitors help constipation, not pain, but may cause diarrhea; tricyclic antidepressants help diarrhea but may cause constipation. A clinical response may occur in 6-8 weeks, but long-term treatment (usually 6-12 months) is required after the initial response to prevent relapse. Augmentation therapy may be beneficial when the therapeutic effect of the first agent is incomplete or associated with side effects. It is recommended to reduce the dose of the first agent and add a second complementary treatment. This may include an atypical antipsychotic or brain-gut behavioral treatment. When tapering central neuromodulators, the dose should be reduced slowly over 4 weeks but may take longer when discontinuation effects occur.
MOESM11 of Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.)
Creators: name: Deng, Qian-Wen
name: Luo, Xiang-Dong
name: Chen, Ya-Ling
name: Zhou, Yi
name: Zhang, Fan-Tao
name: Hu, Biao-Lin
name: Xie, Jian-Kun
Publisher: name: figshare
Year: 2018
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Biological Sciences not elsewhere classified
subject: Mental Health
subject: Plant Biology
subject: Computational Biology

description: Additional file 11: Table S10. Significant GO terms of DEGs in the biological process, cellular component and molecular function category for RLP vs. RCK.
The Gap Between Breastfeeding Research and the Clinical Needs of Lactation Support Providers
Creators: name: Chetwynd, Ellen
name: Demirci, Jill
Publisher: name: SAGE Publications
Year: 2024

description: We have a virtual mountain of evidence demonstrating that
breastfeeding success is benefited by a culture of lactation
support. When breastfeeding people have access to quality
lactation education, help, and accommodations, compared to
groups without those resources, breastfeeding outcomes are
almost always improved. We know that breastfeeding duration,
exclusivity and/or self-efficacy will be better when families
have access to providers with the specific skills needed to
support breastfeeding, particularly difficult breastfeeding
problems. In most countries, we have reached the point where
the support of the breastfeeding couplet is accepted as a medical
care need within the healthcare system. The individuals
providing support and the type of training they have received
vary, but the goal of pain-free, efficient nursing and adequate
infant growth are typically contained within the definition of
a thriving breastfeeding relationship.
Translating Aphrodite: The Sandal-Binder in Two Roman Contexts
Creators: name: Valladares, Hérica
Publisher: name: University of California Press
Year: 2024

description: The Sandal-Binder Aphrodite, a witty variation on Praxiteles’ Aphrodite of Knidos, is one of the most frequently reproduced sculptural types in Greco-Roman art. Created in a variety of materials throughout the Mediterranean, extant versions of this iconography show the goddess in the act of tying (or possibly untying) her sandal. Although a large number of these works of art date between the first and fourth century CE, most studies on the Sandal-Binder have approached it primarily as an expression of Hellenistic Greek artistic trends. The present study shifts our attention away from the cultural milieu of the Sandal-Binder’s creation to that of its reception. Two well-preserved examples—one from a house in Pompeii and the other from London—attest to the process of translating or adapting this sensual image of Aphrodite to a Roman ideological framework. In both cases, it is through the language of body adornment that this transformation is achieved: while the example from Pompeii (a marble statuette adorned with gold paint) shows the goddess wearing contemporary jewelry and clothing, the diminutive silver figurine from London is part of a fashionable hairpin that points to the dissemination of imperial hairstyles in Rome’s remotest province. By calling attention to their design and function, this essay highlights the complex polysemy of Roman Sandal-Binders and the powerful messages they communicated to a diverse audience of viewers both at the heart of the empire and in the provinces.
The synthesis and stabilisation of low oxidation state complexes: utilising magnesium(I) dimers as reducing agents
Creators: name: Bonyhady, Simon James
Publisher: name: Monash University
Year: 2017
Subjects: Uncategorized

description: This thesis pertains to the synthesis and stabilisation of low oxidation state main group element complexes through the utilisation of novel magnesium(I) dimers as reducing agents. As such, it is an exploration of the utility of these magnesium(I) complexes in organometallic synthesis and has resulted in the isolation of a number of compounds featuring unusual structural motifs, oxidation states and bonding modes. Chapter 1 provides a general introduction to low oxidation state main group chemistry and discusses a number of concepts that are unique to this field of study. Particular attention is paid to historical concepts such as the "double bond rule" and the new understanding of chemical bonding that has developed as a result of this "renaissance" in main group chemistry, as well as a general discussion of synthetic methods to access these compounds. Chapter 2 introduces the magnesium(I) dimers reported to date and details both their synthesis and reactivity in organic and organometallic synthesis. Two new β-diketiminato magnesium(I) complexes are described, along with their β-diketiminato magnesium(II) halide precursor complexes, and efforts towards improving the synthesis of these unusual compounds are outlined. A number of other novel β-diketiminato magnesium(II) hydride, alkyl and halide complexes are also presented. Finally, efforts towards the synthesis of soluble models of magnesium amido-boranes, in which this library of magnesium(I and II) complexes is exploited, are also discussed. Chapter 3 presents a case study into the utility of magnesium(I) dimers as reducing agents in organometallic synthesis. A series of amidinato group 14 element(I) dimers [LEEL] (E = Si, Ge, Sn; L = amidinate) were synthesised in high to moderate yield, and comparisons between the magnesium(I) dimers and traditional reducing agents emphasised the efficacy of the magnesium(I) dimers in this role. The tin compound is the first of its type, while one and two previous examples exist for the silicon and germanium complexes, respectively, although they were only isolated in low yield. Chapter 4 describes the development of low oxidation state aluminium hydride chemistry, an area in which magnesium(I) dimers have been instrumental. A number of novel compounds are presented including of a series of compounds which feature remarkable [Al6H6] octahedral cores. Chapter 5 details efforts to extend the use of magnesium(I) dimers to compounds stabilised by bulky terphenyl ligands. The preparation of the second example of a diplumbyne, for which a moderate yielding synthesis was determined, is described. A dialumene and a disilyne were also desirable synthetic targets, and efforts to these ends are also outlined. Finally, Chapter 6 provides a summary of the results presented in this thesis.
Nodal Set Openings on Perturbed Rectangular Domains
Creators: name: Beck, Thomas
name: Marzuola, Jeremy
name: Gupta, Marichi
Publisher: name: Springer Nature
Year: 2024

description: We study the effects of perturbing the boundary of a rectangle on the nodal sets of eigenfunctions of the Laplacian. Namely, for a rectangle of a given aspect ratio N, we identify the first Dirichlet mode to feature a crossing in its nodal set and perturb one of the sides of the rectangle by a close to flat, smooth curve. Such perturbations will often “open” the crossing in the nodal set, splitting it into two curves, and we study the separation between these curves and their regularity. The main technique used is an approximate separation of variables that allows us to restrict study to the first two Fourier modes in an eigenfunction expansion. We show how the nature of the boundary perturbation provides conditions on the orientation of the opening and estimates on its size. In particular, several features of the perturbed nodal set are asymptotically independent of the aspect ratio, which contrasts with prior works. Numerical results supporting our findings are also presented.
MOESM12 of Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.)
Creators: name: Deng, Qian-Wen
name: Luo, Xiang-Dong
name: Chen, Ya-Ling
name: Zhou, Yi
name: Zhang, Fan-Tao
name: Hu, Biao-Lin
name: Xie, Jian-Kun
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Plant Biology

description: Additional file 12: Table S11. Significant KO terms of DEGs in the LLP vs. LCK (Q-value < 0.05).
Additional file 2: of Cross-site comparison of ribosomal depletion kits for Illumina RNAseq library construction
Creators: name: Herbert, Zachary
name: Kershner, Jamie
name: Butty, Vincent
name: Thimmapuram, Jyothi
name: Choudhari, Sulbha
name: Alekseyev, Yuriy
name: Fan, Jun
name: Podnar, Jessica
name: Wilcox, Edward
name: Gipson, Jenny
name: Gillaspy, Allison
name: Jepsen, Kristen
name: BonDurant, Sandra
name: Morris, Krystalynne
name: Berkeley, Maura
name: LeClerc, Ashley
name: Simpson, Stephen
name: Sommerville, Gary
name: Grimmett, Leslie
name: Adams, Marie
name: Levine, Stuart
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Physiology
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Infectious Diseases
subject: FOS: Health sciences

description: Contains the following: Describes normalization of kit protocols and any individual site deviations from this normalization. Figure S1. – BioAnalyzer traces for samples used in the study. Left: Intact UHR, Right: Heat degraded UHR RNA. Figure S2. – Clustering of differentially detected genes. Top 50 most differentially detected genes, as measured by variance of log2RPKM across all samples, were clustered based on their differential expression. TOP: Hierarchical tree of clustering based on a complete linkage function using Euclidean distance. 2ND LINE: Intact/Degraded status is shown. Intact samples are indicated in white while degraded samples are indicated in grey. 3RD LINE: Kit. Dark Blue = RZ|RiboZero Gold, Yellow = LX|Lexogen RiboCop, Aqua = NE|NEBNext rRNA Depletion, Green = Q|Qiagen, Grey = K|Kapa RiboErase, Blue = CR|Clontech Ribogone, Orange = CZ|SMARTer Pico total RNA. HEAT MAP: Red indicate higher level of absolute expression. Scale shown to right. White lines indicate the highest branches within the hierarchical tree. Figure S3. – Insert size distribution for RNAseq libraries from intact RNA. The insert size for each library passing the 50% rRNA filter was calculated for reads with convergent reads that were separated by < 1000 bp. Kit abbreviations: RZ = RiboZero Gold, LX = Lexogen RiboCop, NE = NEBNext rRNA Depletion, K=Kapa RiboErase, CR = Clontech Ribogone, CZ = SMARTer Pico total RNA. Top: length of the 90th percentile of inserts reads. Middle: length of the median insert read. Bottom: length of the 10th percentile of inserts read. Figure S4. - Relative ratio of reads mapping to ERCCs. Fraction of reads mapping to each ERCC mRNA is shown for each replicate. Light horizontal lines show 2-fold changes in fraction observed (log scale). Each expected concentration is shown in a different color. Data sets ordered by intact/degraded status followed by site within each kit left to right. Table S1. Catalog numbers and manual versions for protocols used. Table S2. Comparison of RNA library preparation chemistry variables. (DOCX 21 kb)
MOESM13 of Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.)
Creators: name: Deng, Qian-Wen
name: Luo, Xiang-Dong
name: Chen, Ya-Ling
name: Zhou, Yi
name: Zhang, Fan-Tao
name: Hu, Biao-Lin
name: Xie, Jian-Kun
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Plant Biology

description: Additional file 13: Table S12. Significant KO terms of DEGs in the RLP vs. RCK (Q-value < 0.05).
MOESM14 of Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.)
Creators: name: Deng, Qian-Wen
name: Luo, Xiang-Dong
name: Chen, Ya-Ling
name: Zhou, Yi
name: Zhang, Fan-Tao
name: Hu, Biao-Lin
name: Xie, Jian-Kun
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Plant Biology

description: Additional file 14: Table S13. Previously identified P-deficiency responses related QTL intervals.
title: Judging the intentionality of ambiguous action
Creators: name: Eisenkoeck, Antonia
Publisher: name: Goldsmiths, University of London
Year: 2019

description: Judging the intentionality of others’ actions is a key aspect of social cognition; it gives meaning to actions and helps us predict what others will do. The ability to correctly judge intentionality is central to everyday social interactions as well as our justice system, where responsibility rests on the judgement of intentionality. Despite the clear importance of accurately judging other peoples’ action, it has been suggested that humans have a bias towards intentional attributions (Rosset, 2008). To explain this, Rosset (2008) introduced a dual-process model of intention attribution which suggests that there is an automatic tendency to judge all action as intentional, but that this can be overridden by higher-level controlled cognitive processes, leading to unintentional explanations of behaviour. Consequently, the model predicts that factors facilitating controlled processing (e.g., time to engage in processing, cognitive maturity linked to age, cognitive ability and availability of cognitive capacity) play a role in judging intentionality. In this thesis, I tested some of these predictions, however, apart from a replication of Rosset’s (2008) study, suggesting time pressure increases individuals’ intentionality endorsement, results do not support the dual-process model. Additionally, I investigated judging intentionality in Autism Spectrum Conditions (ASC) and the role of Theory of Mind (ToM). Individuals with ASC showed an increased tendency to attribute intent to ambiguous behaviour compared to neurotypicals, which could not be explained by differences in ToM. These results could indicate a difference in intention attribution style rather than failing to perceive mental states in ASC, which could help understand one aspect of social difficulties in ASC. In summary, the empirical evidence gathered in this thesis suggests that judging intentionality cannot be fully captured in a dual-process model. Therefore, at the end of this thesis, other approaches including a revised dual-process model and a single-system framework will be explored.
MOESM15 of Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.)
Creators: name: Deng, Qian-Wen
name: Luo, Xiang-Dong
name: Chen, Ya-Ling
name: Zhou, Yi
name: Zhang, Fan-Tao
name: Hu, Biao-Lin
name: Xie, Jian-Kun
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Plant Biology

description: Additional file 15: Table S14. DEGs mapped to previously identified P-deficiency responses related QTL intervals.
MOESM16 of Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.)
Creators: name: Deng, Qian-Wen
name: Luo, Xiang-Dong
name: Chen, Ya-Ling
name: Zhou, Yi
name: Zhang, Fan-Tao
name: Hu, Biao-Lin
name: Xie, Jian-Kun
Publisher: name: figshare
Year: 2018
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Plant Biology

description: Additional file 16: Table S15. Co-localized DEGs within the qFWS-4 interval.
MOESM17 of Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.)
Creators: name: Deng, Qian-Wen
name: Luo, Xiang-Dong
name: Chen, Ya-Ling
name: Zhou, Yi
name: Zhang, Fan-Tao
name: Hu, Biao-Lin
name: Xie, Jian-Kun
Publisher: name: figshare
Year: 2018
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Plant Biology

description: Additional file 17: Table S16. Co-localized DEGs within the qFWR-4 interval.
MOESM1 of Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.)
Creators: name: Deng, Qian-Wen
name: Luo, Xiang-Dong
name: Chen, Ya-Ling
name: Zhou, Yi
name: Zhang, Fan-Tao
name: Hu, Biao-Lin
name: Xie, Jian-Kun
Publisher: name: figshare
Year: 2018
Subjects: subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Mental Health
subject: Plant Biology

description: Additional file 1: Table S1. Primers used for real-time PCR in this study.
MOESM2 of Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.)
Creators: name: Deng, Qian-Wen
name: Luo, Xiang-Dong
name: Chen, Ya-Ling
name: Zhou, Yi
name: Zhang, Fan-Tao
name: Hu, Biao-Lin
name: Xie, Jian-Kun
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Computational Biology

description: Additional file 2: Figure S1. Distribution of genes coverage in the leaves and roots of Dongxiang wild rice (DXWR) seedlings with or without low phosphorus treatment, respectively. A leaves without low phosphorus treatment (LCK). B leaves with low phosphorus treatment (LLP). C roots without low phosphorus treatment (RCK). D roots with low phosphorus treatment (RLP). Gene coverage is the percentage of a gene that is covered by reads and defined as the ratio of the number of bases in a gene covered by uniquely mapped reads to the number of total bases in the gene. The pie graph demonstrates the detailed percentage of the different gene coverage listing on the left of the pie graph.
MOESM3 of Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.)
Creators: name: Deng, Qian-Wen
name: Luo, Xiang-Dong
name: Chen, Ya-Ling
name: Zhou, Yi
name: Zhang, Fan-Tao
name: Hu, Biao-Lin
name: Xie, Jian-Kun
Publisher: name: figshare
Year: 2018
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Plant Biology
subject: Computational Biology

description: Additional file 3: Table S2. List of up-regulated genes in LLP vs. LCK.
MOESM4 of Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.)
Creators: name: Deng, Qian-Wen
name: Luo, Xiang-Dong
name: Chen, Ya-Ling
name: Zhou, Yi
name: Zhang, Fan-Tao
name: Hu, Biao-Lin
name: Xie, Jian-Kun
Publisher: name: figshare
Year: 2018
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Plant Biology
subject: Computational Biology

description: Additional file 4: Table S3. List of down-regulated genes in LLP vs. LCK.
MOESM5 of Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.)
Creators: name: Deng, Qian-Wen
name: Luo, Xiang-Dong
name: Chen, Ya-Ling
name: Zhou, Yi
name: Zhang, Fan-Tao
name: Hu, Biao-Lin
name: Xie, Jian-Kun
Publisher: name: figshare
Year: 2018
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Plant Biology
subject: Computational Biology

description: Additional file 5: Table S4. List of up-regulated genes in RLP vs. RCK.
Experiences and Challenges in the Role as Peer Support Workers in a Swedish Mental Health Context - An Interview Study
Creators: name: Wall, Anna
name: Lovheden, Theresia
name: Landgren, Kajsa
name: Stjernswärd, Sigrid
Publisher: name: Taylor & Francis
Year: 2022
Subjects: subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: The focus on recovery within psychiatric care is increasing, where peer support may play a pivotal role. Previous research shows both mixed and promising results in terms of beneficial outcomes for patients and peer support workers (PSW). The study’s aim was to investigate PSW’ experiences of their professional role and associated relationships with healthcare staff and patients. Semi-structured in-depth interviews were conducted with 10 PSW. Data was analyzed with content analysis. Three themes were constructed; “Experience of stigma”, “Authenticity and balance in the patient relationship” and “Opportunities and setbacks in the team”. Challenges included stigmatization, loyalty conflicts, lack of a clear job description and feelings of insecurity and disinterest among other staff. However, the peer support role was perceived as deeply meaningful. The peer support role comes with challenges and opportunities for the PSW, and potentially for the patients and the surrounding work team. Further research is needed to illuminate the value of peer support for patients, PSW and healthcare staff, and potential barriers and facilitators to the integration of peer support within psychiatric care. Supplemental data for this article is available online at https://doi.org/10.1080/01612840.2021.1978596 .
Doc Mcstuffins: How African American Preschoolers Interpret Entertainment-Education Messages
Creators: name: Keys, Shajobia
Publisher: name: Georgia State University
Year: 2016

description: African American children are more likely than white children to be in poor health, even when controlling for socioeconomic status, and the CDC reports that African American youth have the highest prevalence of obesity, which can lead to other diseases such as hypertension, cardiovascular disease and diabetes. Given that African American children are the heaviest viewers of television, it can be an important means of providing culturally appropriate ways to reach them and provide positive health information. This study uses the animated show, Doc McStuffins, as the entertainment-education context for African American preschool viewers. Doc McStuffins emphasizes the importance of taking care of oneself through strategic placement of positive health messages. This study aims to understand whether or not the messages are understood by the show?s target audience, and whether or not they impact the behavior of the target audience, which is key to the success of any entertainment-education campaign.
MOESM6 of Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.)
Creators: name: Deng, Qian-Wen
name: Luo, Xiang-Dong
name: Chen, Ya-Ling
name: Zhou, Yi
name: Zhang, Fan-Tao
name: Hu, Biao-Lin
name: Xie, Jian-Kun
Publisher: name: figshare
Year: 2018
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Plant Biology
subject: Computational Biology

description: Additional file 6: Table S5. List of down-regulated genes in RLP vs. RCK.
Improving prognosis in out-of-hospital cardiac arrest through cardiac support and optimization of post-resuscitative care
Creators: name: Stub, Dion
Publisher: name: Monash University
Year: 2017
Subjects: Uncategorized

description: Out-of-hospital cardiac arrest (OHCA) is a common lethal health problem. Despite significant advances in the diagnosis and treatment of cardiovascular disease, OHCA continues to be a major challenge with unacceptably high mortality and morbidity. Although most research into OHCA has focused on improving rates of return of circulation, many patients die in the post resuscitative period from a unique set of physiological insults, collectively termed the post cardiac arrest syndrome. Over the last decade several clinical trials have highlighted the importance of post-resuscitative care in optimizing survival and neurological recovery. Recently, there have been significant advances in management including recommendations related to regional systems of care, application of therapeutic hypothermia and the utilization of investigative procedures including emergent coronary angiography, cardiac support devices and other tools which provide prognostic information. Despite these advances there has been poor uptake of post-resuscitative care guidelines with significant differences in clinical outcomes between regions and institutions. This thesis focuses on post-resuscitative management in Australia, whilst also exploring new systems and models for OHCA patients in an effort to improve clinical outcomes.
Regulatory T cells effectively downregulate the autoimmune anti-MPO response and ameliorate anti-MPO induced glomerulonephritis in mice
Creators: name: Hu, Peiqi
name: Jennette, J Charles
name: Xiao, Hong
name: Hu, Yichun
name: Free, Meghan E
name: Falk, Ronald J
name: Ciavatta, Dominic J
name: Hogan, Susan L
name: Agosto-Burgos, Christian
name: Elmore, Sandra
Publisher: name: Elsevier
Year: 2024

description: Regulation of autoreactive cells is key for both prevention and amelioration of autoimmune disease. A better understanding of the key cell population(s) responsible for downregulation of autoreactive cells would provide necessary foundational insight for cellular-based therapies in autoimmune disease. Utilizing a mouse model of anti-myeloperoxidase (MPO) glomerulonephritis, we sought to understand which immune cells contribute to downregulation of the anti-MPO autoimmune response. MPO-/- mice were immunized with whole MPO to induce an anti-MPO response. Anti-MPO splenocytes were then transferred into recipient mice (Rag2-/- mice or WT mice). Anti-MPO titers were followed over time. After anti-MPO splenocyte transfer, WT mice are able to downregulate the anti-MPO response while anti-MPO titers persist in Rag2-/- recipients. Reconstitution with WT splenocytes into Rag2-/- recipients prior to anti-MPO splenocyte transfer enabled mice to downregulate the anti-MPO immune response. Therefore, wildtype splenocytes contain a cellular population that is capable of downregulating the autoimmune response. Through splenocyte transfer, antibody depletion experiments, and purified cell population transfers, we confirmed that the regulatory T cell (Treg) population is responsible for the downregulation of the anti-MPO autoimmune response. Further investigation revealed that functional Tregs from WT mice are capable of downregulating anti-MPO antibody production and ameliorate anti-MPO induced glomerulonephritis. These data underscore the importance of functional Tregs for control of autoimmune responses and prevention of end-organ damage due to autoimmunity.
Magnesium alloys for temporary implant applications: stress corrosion cracking and biocompatible coating
Creators: name: Choudhary, Lokesh Kumar
Publisher: name: Monash University
Year: 2017
Subjects: Uncategorized

description: Magnesium (Mg) alloys have emerged as potential candidate materials for construction of biodegradable temporary implant devices particularly due to advantages of favourable mechanical properties, biodegradability and biocompatibility. However, the poor corrosion resistance of Mg alloys in the physiological environment presents a major challenge to their use as biodegradable temporary implants. Furthermore, complex interaction of mechanical loading and aggressive physiological environment may often pose a considerable risk of premature failure of implant devices before expected service life due to the phenomenon of environmentally assisted cracking, i.e. stress corrosion cracking (SCC) and corrosion fatigue. Therefore, it is essential to evaluate the mechanical integrity of Mg alloys before they can be put to actual use. Accordingly, this study has attempted to establish a mechanistic understanding of SCC of one of the most common magnesium alloys, AZ91D and a few novel aluminium-free magnesium alloys, ZX50, WZ21 and WE43 in the simulated body environment. The SCC susceptibility of the alloys in a simulated human body fluid was established by slow strain rate tensile (SSRT) testing using smooth specimens under different environmental conditions that could mechanistically confirm the occurrence of SCC. However, to assess the life of the implant devices that often possess fine micro-cracks, SCC susceptibility of notched specimens of AZ91D was investigated by circumferential notch tensile (CNT) testing to generate important design data (i.e. threshold stress intensity for SCC (KISCC) and SCC crack growth rate). The SCC susceptibility of the alloys was confirmed by fractographic features of transgranular and/or intergranular cracking. This study also investigated the role of novel biocompatible graphene-calcium carbonate coating in improving the corrosion/SCC resistance of AZ91D alloy as well as in promoting the in-situ biomineralization of bone apatite in the physiological environment.
MOESM7 of Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.)
Creators: name: Deng, Qian-Wen
name: Luo, Xiang-Dong
name: Chen, Ya-Ling
name: Zhou, Yi
name: Zhang, Fan-Tao
name: Hu, Biao-Lin
name: Xie, Jian-Kun
Publisher: name: figshare
Year: 2018
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Plant Biology

description: Additional file 7: Table S6. List of up-regulated genes both in the LLP vs. LCK and RLP vs. RCK.
MADRASAH'S STRATEGY IN FACING THE CHALLENGES OF GLOBALIZATION AND RELIGIOUS MODERATION
Creators: name: Nurhasnawati
name: Al-Amin
name: Nugroho Susanto
name: Loso Judijanto
name: Frederikus Fios
name: Muhammad Haris
name: Hosaini
Publisher: name: Zenodo
Year: 2024
Subjects: Madrasa Strategy, Challenges Of Globalization, Religious Moderation.

description: Abstract

In the current era of globalization, there are many issues that bring each other down, both between people and religions. A person's belief in religion is not required to have one belief, but rather freedom as the right to choose a religion according to one's beliefs. In improving the quality of knowledge of religious moderation in Indonesia, the students in this case are making efforts using appropriate strategies. This strategy is carried out through formal or official education in Islamic boarding school education and through extracurricular activities. The first strategy is carried out by students by studying the values of Islamic moderation in learning activities, while the second strategy is carried out with various extracurricular activities to support the government's efforts to realize good Islamic moderation. The researcher looks at the library research method in this article, specifically how research is implemented by reading a variety of literary sources, such as books related to madrasa strategies in facing the challenges of globalization and religious moderation, journals that have been searched, and other articles for additional data sources.
PEDAGOGICAL ORIENTATION USE OF INNOVATIVE METHODS
Creators: name: Ibatova, Klara
Publisher: name: Zenodo
Year: 2024

description: The education system of Uzbekistan in recent decades has been actively developing in line with innovative technologies introduced at all levels of the educational process. The professional activity of teachers of higher education was no exception, the innovative development of which is a priority direction today. The need for essential and technological improvement of the practical activities of educators is due not only to changes in social life, but also to transformations in the thinking of modern man.
MOESM8 of Transcriptome analysis of phosphorus stress responsiveness in the seedlings of Dongxiang wild rice (Oryza rufipogon Griff.)
Creators: name: Deng, Qian-Wen
name: Luo, Xiang-Dong
name: Chen, Ya-Ling
name: Zhou, Yi
name: Zhang, Fan-Tao
name: Hu, Biao-Lin
name: Xie, Jian-Kun
Publisher: name: figshare
Year: 2018
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Plant Biology

description: Additional file 8: Table S7. List of down-regulated genes both in the LLP vs. LCK and RLP vs. RCK.
Within‐individual trophic variability drives short‐term intraspecific trait variation in natural populations
Creators: name: Musseau, Camille
name: Vincenzi, Simone
name: Santoul, Frédéric
name: Boulêtreau, Stéphanie
name: Jesenšek, Dusan
name: Crivelli, Alain J.
Publisher: name: Freie Universität Berlin
Year: 2019
Subjects: subject: between individual
subject: individual trajectory
subject: intraspecific trait variability
subject: longitudinal survey
subject: salmonid
subject: stable isotope analysis
subject: time‐scales
subject: within individual
subject: 500 Naturwissenschaften und Mathematik::590 Tiere (Zoologie)::590 Tiere (Zoologie)

description: 1 Intraspecific trait variability (ITV) maintains functional diversity in populations and communities, and plays a crucial role in ecological and evolutionary processes such as trophic cascades or speciation. Furthermore, functional variation within a species and its populations can help buffer against harmful environmental changes. Trait variability within species can be observed from differences among populations, and between‐ and within individuals. In animals, ITV can be driven by ontogeny, the environment in which populations live and by within‐individual specialization or variation unrelated to growth. However, we still know little about the relative strength of these drivers in determining ITV variation in natural populations. 2 Here, we aimed to (a) measure the relative strength of between‐ and within‐individual effects of body size on ITV over time, and (b) disentangle the trophic changes due to ontogeny from other sources of variability, such as the environment experienced by populations and individual preferences at varying temporal and spatial scales. 3 We used as a model system the endangered marble trout Salmo marmoratus, a freshwater fish living in a restricted geographical area (<900 km2) that shows marked changes in diet through ontogeny. We investigated two trophic traits, trophic position and resource use, with stable isotopes (δ15N and δ13C), and followed over time 238 individually tagged marble trout from six populations to estimate the trophic changes between and within individuals through ontogeny at three different time‐scales (short term: 3 months, medium term: 1 year and long term: 2 years). 4 We found that the relative strength of between‐ and within‐individual effects of body size on trophic position and resource use change strongly over time. Both effects played a similar role in ITV over medium‐ and long‐term time‐scales, but within‐individual effects were significantly driving trophic variability over short‐term scales. Apart from ontogenetic shifts, individuals showed variability in trophic traits as big as the variability estimated between populations. 5 Overall, our results show how the relative strengths of ITV drivers change over time. This study evidences the crucial importance of considering effects of time‐scales on functional variability at individual, population and species levels.