cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Authorship Conflicts in Academia: an International Cross-Discipline Survey
Creators: name: Savchenko, Elizaveta
name: Rosenfeld, Ariel
Publisher: name: arXiv
Year: 2023
Subjects: subject: Digital Libraries (cs.DL)
subject: Information Retrieval (cs.IR)
subject: FOS: Computer and information sciences

description: Collaboration among scholars has emerged as a significant characteristic of contemporary science. As a result, the number of authors listed in publications continues to rise steadily. Unfortunately, determining the authors to be included in the byline and their respective order entails multiple difficulties which often lead to conflicts. Despite the large volume of literature about conflicts in academia, it remains unclear how exactly it is distributed over the main socio-demographic properties, as well as the different types of interactions academics experience. To address this gap, we conducted an international and cross-disciplinary survey answered by 752 academics from 41 fields of research and 93 countries that statistically well-represent the overall academic workforce. Our findings are concerning and suggest that authorship credit conflicts arise very early in one's academic career, even at the level of Master and Ph.D., and become increasingly common over time.
Additional file 1 of Stressor control and regional inflammatory responses in the brain: regulation by the basolateral amygdala
Creators: name: Adkins, Austin M.
name: Colby, Emily M.
name: Kim, Woong-Ki
name: Wellman, Laurie L.
name: Sanford, Larry D.
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: Mental Health

description: Additional file 1: Fig. S1: Immune-Related Pathways within HPC and mPFC Do Not Differ Greatly between CHCO and CMTO Regardless of Excitatory or Inhibitory Optogenetic Manipulation of BLA. Heatmap displaying sample’s directed global significance pathway scores for hippocampus and medial prefrontal cortex in mocked trained control with inhibitory opto and mocked trained control with excitatory opto compared to home cage with control vector. Red denotes neuroinflammatory-related pathway gene sets whose genes exhibit extensive over-expression; green denotes gene sets with extensive under-expression. Mean scores are plotted to show how they vary across treatment conditions. Figure S2. CMTO Induced Low-Grade Inflammatory GeneExpression Compared to CHCO, but Did Not Further Activate the Immune System Regardlessof Excitatory or Inhibitory Optogenetic Manipulation of BLA.
Starobinsky Inflation and beyond in Einstein-Cartan Gravity
Creators: name: He, Minxi
name: Hong, Muzi
name: Mukaida, Kyohei
Publisher: name: arXiv
Year: 2024
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We show that various types of scalaron-induced inflation, including the Starobinsky inflation, can be realized in the Einstein-Cartan gravity with the Nieh-Yan term and/or the Holst term. Einstein-Cartan $f(R)$ theory is known not to induce an additional scalar degree of freedom, the scalaron, contrary to the case in the metric formalism. However, there exist geometric quantities other than the Ricci scalar in the Einstein-Cartan gravity, such as the Nieh-Yan and the Holst terms. Once we introduce them in addition to the Ricci scalar and allow general combinations up to their quadratic order, the scalaron can become dynamical to realize inflation. With the rank of the associate matrix of the quadratic part to be one, the models are equivalent to the $α$-attractor inflation and its deformation, including the Starobinsky inflation and quadratic chaotic inflation, etc. For more general cases with the rank greater than one, the models fall into the $k$-essence, realizing the rank one case in a particular limit.
description: 24 pages, 2 figures
Supplemental_Tables_-_clean – Supplemental material for Effect of Bisphosphonates on Bone Health in Adult Renal Transplant Patients: Beyond the First Year Posttransplant—A Systematic Review and Meta-Analysis
Creators: name: Lip, Alyssa
name: Warias, Ashley
name: M. Khaled Shamseddin
name: Thomson, Benjamin
name: D. Thiwanka Wijeratne
Publisher: name: SAGE Journals
Year: 2019
Subjects: Medicine

description: Supplemental material, Supplemental_Tables_-_clean for Effect of Bisphosphonates on Bone Health in Adult Renal Transplant Patients: Beyond the First Year Posttransplant—A Systematic Review and Meta-Analysis by Alyssa Lip, Ashley Warias, M. Khaled Shamseddin, Benjamin Thomson and D. Thiwanka Wijeratne in Canadian Journal of Kidney Health and Disease
Domain wall automotion in three-dimensional magnetic helical interconnectors
Creators: name: Skoric, L.
name: Donnelly, C.
name: Hierro-Rodriguez, A.
name: Ruiz-Gómez, S.
name: Foerster, M.
name: Orti, M. A. Niño
name: Belkhou, R.
name: Abert, C.
name: Suess, D.
name: Fernández-Pacheco, A.
Publisher: name: arXiv
Year: 2021
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences

description: The fundamental limits currently faced by traditional computing devices necessitate the exploration of new ways to store, compute and transmit information. Here, we propose a three-dimensional (3D) magnetic interconnector that exploits geometry-driven automotion of domain walls (DWs), for the transfer of magnetic information between functional magnetic planes. By combining state-of-the-art 3D nanoprinting and standard physical vapor deposition, we prototype 3D helical DW conduits. We observe the automotion of DWs by imaging their magnetic state under different field sequences using X-ray microscopy, observing a robust unidirectional motion of DWs from the bottom to the top of the spirals. From experiments and micromagnetic simulations, we determine that the large thickness gradients present in the structure are the main mechanism for 3D DW automotion. We obtain direct evidence of how this tailorable magnetic energy gradient is imprinted in the devices, and how it competes with pinning effects due to local changes in the energy landscape. Our work also predicts how this effect could lead to high DW velocities, reaching the Walker limit during automotion. This work provides new possibilities for efficient transfer of magnetic information in three dimensions.
Triangular solutions to the reflection equation for $U_q(\widehat{sl_n})$
Creators: name: Kolyaskin, Dmitry
name: Mangazeev, Vladimir V
Publisher: name: arXiv
Year: 2024
Subjects: subject: Mathematical Physics (math-ph)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Quantum Algebra (math.QA)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: We study solutions of the reflection equation related to the quantum affine algebra $U_q(\widehat{sl_n})$. First, we explain how to construct a family of stochastic integrable vertex models with fixed boundary conditions. Then, we construct upper- and lower-triangular solutions of the reflection equation related to symmetric tensor representations of $U_q(\widehat{sl_n})$ with arbitrary spin. We also prove the star-star relation for the Boltzmann weights of the Ising-type model, conjectured by Bazhanov and Sergeev, and use it to verify certain properties of the solutions obtained.
description: 25 pages
Does Practice make perfect? A Longitudinal analysis of the contractual governance of Ireland's first public-private partnership
Creators: name: O'Shea, Cian
name: Palcic, Donal
name: Reeves, Eoin
Publisher: name: University of Limerick
Year: 2025
Subjects: classificationCode: 38
subject: Economics

description: This paper examines how contractual governance in a public–private partnership evolved over a 16-year period. It adopts a novel approach by revisiting an earlier analysis of Ireland's first PPP contract for school's infrastructure. We examine contractual governance at two distinct levels: the contract management level (between government and contractor) and the operational level (between school principals and facilities managers). We find that contractual governance between contracting parties has remained transactional but is now characterized by higher levels of trust and cooperation. However, we find that contractual governance has shifted from transactional to relational at the operational level. A number of factors have contributed to the evolution toward increased relational governance. These include the transfer of contract management to a newly established specialized PPP procurement agency, changes in personnel involved in the project, and the adoption of a more devolved approach to facilities management through the introduction of on-site facilities managers
Additional file 1 of Health state utility estimates for value assessments of novel treatments in Huntington’s disease: a systematic literature review
Creators: name: Sawant, Ruta
name: Paret, Kyle
name: Petrillo, Jennifer
name: Koenig, Aaron
name: Wolowacz, Sorrel
name: Ronquest, Naoko
name: Rickards, Hugh
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Chemical Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy

description: Supplementary Material 1
Generating contingency tables with fixed marginal probabilities and dependence structures described by loglinear models
Creators: name: Hammond, Ceejay
name: van der Heijden, Peter G. M.
name: Smith, Paul A.
Publisher: name: arXiv
Year: 2023
Subjects: subject: Methodology (stat.ME)
subject: FOS: Computer and information sciences

description: We present a method to generate contingency tables that follow loglinear models with prescribed marginal probabilities and dependence structures. We make use of (loglinear) Poisson regression, where the dependence structures, described using odds ratios, are implemented using an offset term. We apply this methodology to carry out simulation studies in the context of population size estimation using dual system and triple system estimators, popular in official statistics. These estimators use contingency tables that summarise the counts of elements enumerated or captured within lists that are linked. The simulation is used to investigate these estimators in the situation that the model assumptions are fulfilled, and the situation that the model assumptions are violated.
Adaptive Numerical Solution of Kadanoff-Baym Equations
Creators: name: Meirinhos, Francisco
name: Kajan, Michael
name: Kroha, Johann
name: Bode, Tim
Publisher: name: arXiv
Year: 2021
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Quantum Gases (cond-mat.quant-gas)
subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences

description: A time-stepping scheme with adaptivity in both the step size and the integration order is presented in the context of non-equilibrium dynamics described via Kadanoff-Baym equations. The accuracy and effectiveness of the algorithm are analysed by obtaining numerical solutions of exactly solvable models. We find a significant reduction in the number of time-steps compared to fixed-step methods. Due to the at least quadratic scaling of Kadanoff-Baym equations, reducing the amount of steps can dramatically increase the accessible integration time, opening the door for the study of long-time dynamics in interacting systems. A selection of illustrative examples is provided, among them interacting and open quantum systems as well as classical stochastic processes. An open-source implementation of our algorithm in the scientific-computing language Julia is made available.
description: 37 pages, 17 figures
Supplemental_material - Can a Different Formulation of Vitamin D3 Allow Savings? An Analysis From an Italian Regional Perspective
Creators: name: Sanò, Mario
name: Dutto, Patrizia
name: D’Anna, Stefano
name: Rognoni, Carla
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: Medicine
subject: 111799 Public Health and Health Services not elsewhere classified
subject: FOS: Health sciences

description: Supplemental_material for Can a Different Formulation of Vitamin D3 Allow Savings? An Analysis From an Italian Regional Perspective by Mario Sanò, Patrizia Dutto, Stefano D’Anna and Carla Rognoni in Health Services Research and Managerial Epidemiology
A relation between the cube polynomials of partial cubes and the clique polynomials of their crossing graphs
Creators: name: Xie, Yan-Ting
name: Feng, Yong-De
name: Xu, Shou-Jun
Publisher: name: arXiv
Year: 2023
Subjects: subject: Combinatorics (math.CO)
subject: FOS: Mathematics
subject: 05C31, 05C75

description: Partial cubes are the graphs which can be embedded into hypercubes. The {\em cube polynomial} of a graph $G$ is a counting polynomial of induced hypercubes of $G$, which is defined as $C(G,x):=\sum_{i\geqslant 0}α_i(G)x^i$, where $α_i(G)$ is the number of induced $i$-cubes (hypercubes of dimension $i$) of $G$. The {\em clique polynomial} of $G$ is defined as $Cl(G,x):=\sum_{i\geqslant 0}a_i(G)x^i$, where $a_i(G)$ ($i\geqslant 1$) is the number of $i$-cliques in $G$ and $a_0(G)=1$. Equivalently, $Cl(G, x)$ is exactly the independence polynomial of the complement $\overline{G}$ of $G$. The {\em crossing graph} $G^{\#}$ of a partial cube $G$ is the graph whose vertices are corresponding to the $Θ$-classes of $G$, and two $Θ$-classes are adjacent in $G^{\#}$ if and only if they cross in $G$. In the present paper, we prove that for a partial cube $G$, $C(G,x)\leqslant Cl(G^{\#}, x+1)$ and the equality holds if and only if $G$ is a median graph. Since every graph can be represented as the crossing graph of a median graph [SIAM J. Discrete Math., 15 (2002) 235--251], the above necessary-and-sufficient result shows that the study on the cube polynomials of median graphs can be transformed to the one on the clique polynomials of general graphs (equivalently, on the independence polynomials of their complements). In addition, we disprove the conjecture that the cube polynomials of median graphs are unimodal.
description: 13 pages,2 figures
Supplemental_Table_1_SS_pek_190510 – Supplemental material for The impact of comorbidities on mortality among men and women with COPD: report from the OLIN COPD study
Creators: name: Sawalha, Sami
name: Hedman, Linnea
name: Backman, Helena
name: Stenfors, Nikolai
name: Rönmark, Eva
name: Lundbäck, Bo
name: Lindberg, Anne
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 111702 Aged Health Care
subject: FOS: Health sciences
subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: FOS: Clinical medicine
subject: 110203 Respiratory Diseases

description: Supplemental material, Supplemental_Table_1_SS_pek_190510 for The impact of comorbidities on mortality among men and women with COPD: report from the OLIN COPD study by Sami Sawalha, Linnea Hedman, Helena Backman, Nikolai Stenfors, Eva Rönmark, Bo Lundbäck and Anne Lindberg in Therapeutic Advances in Respiratory Disease
KBody: Towards general, robust, and aligned monocular whole-body estimation
Creators: name: Zioulis, Nikolaos
name: O'Brien, James F.
Publisher: name: arXiv
Year: 2023
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: KBody is a method for fitting a low-dimensional body model to an image. It follows a predict-and-optimize approach, relying on data-driven model estimates for the constraints that will be used to solve for the body's parameters. Acknowledging the importance of high quality correspondences, it leverages ``virtual joints" to improve fitting performance, disentangles the optimization between the pose and shape parameters, and integrates asymmetric distance fields to strike a balance in terms of pose and shape capturing capacity, as well as pixel alignment. We also show that generative model inversion offers a strong appearance prior that can be used to complete partial human images and used as a building block for generalized and robust monocular body fitting. Project page: https://zokin.github.io/KBody.
description: 11 pages, 6 figures, 58 supplemental figures, project page https://zokin.github.io/KBody , also posted at with high-res images http://graphics.berkeley.edu/papers/Zioulis-KBT-2023-06
Additional file 1 of Undiagnosed hypertension and associated factors among adults in ethiopia: a systematic review and meta-analysis
Creators: name: Ambaw Kassie, Gizachew
name: Alemu, Afework
name: Yosef Gebrekidan, Amanuel
name: Asmare Adella, Getachew
name: Eshetu, Kirubel
name: Wolie Asres, Abiyot
name: Sisay Asgedom, Yordanos
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Science Policy

description: Supplementary Material 1
Baryogenesis from sphaleron decoupling
Creators: name: Hong, Muzi
name: Kamada, Kohei
name: Yokoyama, Jun'ichi
Publisher: name: arXiv
Year: 2023
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: The electroweak sphaleron process breaks the baryon number conservation within the realms of the Standard Model of particle physics (SM). Recently, it is pointed out that its decoupling may provide the out-of-equilibrium condition required for baryogenesis. In this paper, we study such a scenario taking into account the baryon-number wash-out effect of the sphaleron itself to improve the estimate. We clarify the amount of CP violation required for this scenario to explain the observed asymmetry.
description: 16 pages, 5 figures
Beyond Mathematics: Rethinking Constants as a Limiting Factor in Scientific Progress
Creators: name: Vivek Maurya
Publisher: name: Zenodo
Year: 2025

description: Abstract:Mathematics has long been the foundation of scientific discovery, offering predictive and explanatory power across disciplines. However, its reliance on fixed constants—such as the speed of light, Planck’s constant, and the fine-structure constant—suggests an inherent limitation. Historical paradigm shifts, from Newtonian mechanics to Einstein’s relativity and quantum mechanics, reveal that previously assumed constants may not be truly invariant. This paper explores whether mathematics, as we currently conceive it, is a limiting factor in further intellectual progress. We propose the necessity of a post-mathematical framework that relies not on static equations but on evolving patterns, dynamic relationships, and computational or cognitive models of reality. By analyzing Gödel’s incompleteness theorem, quantum uncertainty, and emerging ideas in computational physics and information theory, we discuss the potential for a new paradigm beyond mathematics. This work aims to spark discourse on whether an alternative, yet undiscovered, cognitive framework could lead to breakthroughs in understanding complex phenomena such as consciousness, dark matter, and the fundamental nature of the universe.
Additional file 1 of Using a priority setting exercise to identify priorities for guidelines on newborn and child health in South Africa, Malawi, and Nigeria
Creators: name: Durão, Solange
name: Effa, Emmanuel
name: Mbeye, Nyanyiwe
name: Mthethwa, Mashudu
name: McCaul, Michael
name: Naude, Celeste
name: Brand, Amanda
name: Blose, Ntombifuthi
name: Mabetha, Denny
name: Chibuzor, Moriam
name: Arikpo, Dachi
name: Chipojola, Roselyn
name: Kunje, Gertrude
name: Vandvik, Per Olav
name: Esu, Ekpereonne
name: Lewin, Simon
name: Kredo, Tamara
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Environmental Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Additional file1: Figure S1. Rating of importance of survey topics in South Africa. Figure S2. Rating of importance of Malawi survey topics. Figure S3. Rating of importance of the topics included in the Nigeria survey.
Floquet Dynamical Decoupling at Zero Bias
Creators: name: Xu, Peng
name: Zhang, Jun
Publisher: name: arXiv
Year: 2023
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: FOS: Physical sciences

description: Dynamical decoupling (DD) is an efficient method to decouple systems from environmental noises and to prolong the coherence time of systems. In contrast to discrete and continuous DD protocols in the presence of bias field, we propose a Floquet DD at zero bias to perfectly suppress both the zeroth and first orders of noises according to the Floquet theory. Specifically, we demonstrate the effectiveness of this Floquet DD protocol in two typical systems including a spinor atomic Bose-Einstein condensate decohered by classical stray magnetic fields and a semiconductor quantum dot electron spin coupled to nuclear spins. Furthermore, our protocol can be used to sense high-frequency noises. The Floquet DD protocol we propose shines new light on low-cost and high-portable DD technics without bias field and with low controlling power, which may have wide applications in quantum computing, quantum sensing, nuclear magnetic resonance and magnetic resonance imaging.
description: 6 pages, 4 figures
Supplemental material for MALAT1 modulates miR-146’s protection of microvascular endothelial cells against LPS-induced NF-κB activation and inflammatory injury
Creators: name: Feng, Lin-Lin
name: Xin, Wei-Na
name: Tian, Xiu-Li
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 110306 Endocrinology
subject: FOS: Clinical medicine

description: Supplemental Material for MALAT1 modulates miR-146’s protection of microvascular endothelial cells against LPS-induced NF-κB activation and inflammatory injury by Lin-Lin Feng, Wei-Na Xin and Xiu-Li Tian in Innate Immunity
Mixed-integer linear programming for computing optimal experimental designs
Creators: name: Harman, Radoslav
name: Rosa, Samuel
Publisher: name: arXiv
Year: 2023
Subjects: subject: Computation (stat.CO)
subject: FOS: Computer and information sciences
subject: 62K05, 62J05, 90C11, 90C22

description: The problem of computing an exact experimental design that is optimal for the least-squares estimation of the parameters of a regression model is considered. We show that this problem can be solved via mixed-integer linear programming (MILP) for a wide class of optimality criteria, including the criteria of A-, I-, G- and MV-optimality. This approach improves upon the current state-of-the-art mathematical programming formulation, which uses mixed-integer second-order cone programming. The key idea underlying the MILP formulation is McCormick relaxation, which critically depends on finite interval bounds for the elements of the covariance matrix of the least-squares estimator corresponding to an optimal exact design. We provide both analytic and algorithmic methods for constructing these bounds. We also demonstrate the unique advantages of the MILP approach, such as the possibility of incorporating multiple design constraints into the optimization problem, including constraints on the variances and covariances of the least-squares estimator.
description: Accepted manuscript
Fixed particle number constraint in a simple model of a thermal expanding system and $pp$ collisions at the LHC
Creators: name: Adzhymambetov, M. D.
name: Akkelin, S. V.
name: Sinyukov, Yu. M.
Publisher: name: arXiv
Year: 2021
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Experiment (hep-ex)
subject: Nuclear Experiment (nucl-ex)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: Two-boson momentum correlations at fixed particle number constraint are studied in a simple analytically solvable model of a thermal expanding system. We show that the increase of expansion rate, as well as increase of particle multiplicity, enhances the ground-state contribution to particle momentum spectra and leads to suppression of the Bose-Einstein momentum correlations. The relations of these findings to the multiplicity-dependent measurements of the Bose-Einstein momentum correlations in high-multiplicity $p+p$ collision events at the LHC are discussed.
description: 21 pages, 6 figures
Figure_legends_for_the__supplemental_figures – Supplemental material for Blastic natural killer cell lymphoma/leukaemia in a cat
Creators: name: Hirabayashi, Miyuki
name: Chambers, James K
name: Sugawara, Mei
name: Ohmi, Aki
name: Tsujimoto, Hajime
name: Nakayama, Hiroyuki
name: Uchida, Kazuyuki
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 70706 Veterinary Medicine
subject: FOS: Veterinary sciences

description: Supplemental material, Figure_legends_for_the__supplemental_figures for Blastic natural killer cell lymphoma/leukaemia in a cat by Miyuki Hirabayashi, James K Chambers, Mei Sugawara, Aki Ohmi, Hajime Tsujimoto, Hiroyuki Nakayama and Kazuyuki Uchida in Journal of Feline Medicine and Surgery Open Reports
ILRR_Shaw_Sorenson_Supplemental-Online-Appendix – Supplemental material for The Productivity Advantage of Serial Entrepreneurs
Creators: name: Shaw, Kathryn
name: Sørensen, Anders
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: Economics
subject: 150310 Organisation and Management Theory
subject: FOS: Economics and business

description: Supplemental material, ILRR_Shaw_Sorenson_Supplemental-Online-Appendix for The Productivity Advantage of Serial Entrepreneurs by Kathryn Shaw and Anders Sørensen in ILR Review
Additional file 1 of The implementation of embedded researchers in policy, public services, and commercial settings: a systematic evidence and gap map
Creators: name: Kneale, Dylan
name: Stansfield, Claire
name: Goldman, Rebecca
name: Lester, Sarah
name: Edwards, Rachael C.
name: Thomas, James
Publisher: name: figshare
Year: 2024
Subjects: Medicine
Cancer
Science Policy

description: Additional file 1:Appendix 1. Steps taken in designing the search strategy and additional (non-database) searches and example database search. Appendix 2. Detailed inclusion/exclusion criteria. Appendix 3. Further details on identification of evidence. Appendix 4. Quality Assurance. Appendix 5. List of included studies and additional papers. Appendix 6. Distribution of studies by country. Appendix 7. Full list of sectors represented. Appendix 8. Evaluation designs implemented. Appendix 9. Codes and definitions for nature of embeddedness. Appendix 10. Terms used to describe embedded researcher interventions. Appendix 11.
Ostracism_and_VeracityJudgments_R1_Supplement_final – Supplemental material for When and Why Being Ostracized Affects Veracity Judgments
Creators: name: Eck, Jennifer
name: Schoel, Christiane
name: Marc-André Reinhard
name: Greifeneder, Rainer
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology

description: Supplemental material, Ostracism_and_VeracityJudgments_R1_Supplement_final for When and Why Being Ostracized Affects Veracity Judgments by Jennifer Eck, Christiane Schoel, Marc-André Reinhard and Rainer Greifeneder in Personality and Social Psychology Bulletin
Additional file 1 of Deep learning for segmentation of the cervical cancer gross tumor volume on magnetic resonance imaging for brachytherapy
Creators: name: Rodríguez Outeiral, Roque
name: González, Patrick J.
name: Schaake, Eva E.
name: van der Heide, Uulke A.
name: Simões, Rita
Publisher: name: figshare
Year: 2024
Subjects: subject: Artificial Intelligence and Image Processing
subject: FOS: Computer and information sciences

description: Supplementary Material 1: Additional File 1. Description: Extra details on the training procedure. Dictionary information as provided by the nnU-Net in the debug.json.
Spectral co-Clustering in Multi-layer Directed Networks
Creators: name: Su, Wenqing
name: Guo, Xiao
name: Chang, Xiangyu
name: Yang, Ying
Publisher: name: arXiv
Year: 2023
Subjects: subject: Statistics Theory (math.ST)
subject: Applications (stat.AP)
subject: FOS: Mathematics
subject: FOS: Computer and information sciences

description: Modern network analysis often involves multi-layer network data in which the nodes are aligned, and the edges on each layer represent one of the multiple relations among the nodes. Current literature on multi-layer network data is mostly limited to undirected relations. However, direct relations are more common and may introduce extra information. This study focuses on community detection (or clustering) in multi-layer directed networks. To take into account the asymmetry, a novel spectral-co-clustering-based algorithm is developed to detect co-clusters, which capture the sending patterns and receiving patterns of nodes, respectively. Specifically, the eigendecomposition of the debiased sum of Gram matrices over the layer-wise adjacency matrices is computed, followed by the k-means, where the sum of Gram matrices is used to avoid possible cancellation of clusters caused by direct summation. Theoretical analysis of the algorithm under the multi-layer stochastic co-block model is provided, where the common assumption that the cluster number is coupled with the rank of the model is relaxed. After a systematic analysis of the eigenvectors of the population version algorithm, the misclassification rates are derived, which show that multi-layers would bring benefits to the clustering performance. The experimental results of simulated data corroborate the theoretical predictions, and the analysis of a real-world trade network dataset provides interpretable results.
Supplemental_Material - Cancers in Vietnam—Burden and Control Efforts: A Narrative Scoping Review
Creators: name: Pham, Tung
name: Bui, Linh
name: Kim, Giang
name: Hoang, Dong
name: Tran, Thuan
name: Hoang, Minh
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 111299 Oncology and Carcinogenesis not elsewhere classified
subject: FOS: Clinical medicine

description: Supplemental_Material for Cancers in Vietnam—Burden and Control Efforts: A Narrative Scoping Review by Tung Pham, Linh Bui, Giang Kim, Dong Hoang, Thuan Tran and Minh Hoang in Cancer Control
Uncertainty-Encoded Multi-Modal Fusion for Robust Object Detection in Autonomous Driving
Creators: name: Lou, Yang
name: Song, Qun
name: Xu, Qian
name: Tan, Rui
name: Wang, Jianping
Publisher: name: arXiv
Year: 2023
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Artificial Intelligence (cs.AI)
subject: FOS: Computer and information sciences

description: Multi-modal fusion has shown initial promising results for object detection of autonomous driving perception. However, many existing fusion schemes do not consider the quality of each fusion input and may suffer from adverse conditions on one or more sensors. While predictive uncertainty has been applied to characterize single-modal object detection performance at run time, incorporating uncertainties into the multi-modal fusion still lacks effective solutions due primarily to the uncertainty's cross-modal incomparability and distinct sensitivities to various adverse conditions. To fill this gap, this paper proposes Uncertainty-Encoded Mixture-of-Experts (UMoE) that explicitly incorporates single-modal uncertainties into LiDAR-camera fusion. UMoE uses individual expert network to process each sensor's detection result together with encoded uncertainty. Then, the expert networks' outputs are analyzed by a gating network to determine the fusion weights. The proposed UMoE module can be integrated into any proposal fusion pipeline. Evaluation shows that UMoE achieves a maximum of 10.67%, 3.17%, and 5.40% performance gain compared with the state-of-the-art proposal-level multi-modal object detectors under extreme weather, adversarial, and blinding attack scenarios.
description: In proceedings of the 26th European Conference on Artificial Intelligence ECAI 2023. 8 pages + 2 appendix pages
ResearchBox 2274, 'Network analysis - stats anxiety and other factors', https://researchbox.org/2274
Creators: name: Joshua March
name: David Hamilton
name: Amy Grech
name: Ross Brisco
name: Dawn McCormack
Publisher: name: Zenodo
Year: 2025

description: Box title: 'Network analysis - stats anxiety and other factors'   Reference: Joshua March, David Hamilton, Dawn McCormack, Ross Brisco, Amy Grech, ' A network analysis of statistics anxiety symptoms and their antecedents in UK Higher Education students', Annals of the New York Academy of SciencesNote: this backup was created automatically by a ResearchBox bot
Autonomous Point Cloud Segmentation for Power Lines Inspection in Smart Grid
Creators: name: Kyuroson, Alexander
name: Koval, Anton
name: Nikolakopoulos, George
Publisher: name: arXiv
Year: 2023
Subjects: subject: Robotics (cs.RO)
subject: Artificial Intelligence (cs.AI)
subject: FOS: Computer and information sciences

description: LiDAR is currently one of the most utilized sensors to effectively monitor the status of power lines and facilitate the inspection of remote power distribution networks and related infrastructures. To ensure the safe operation of the smart grid, various remote data acquisition strategies, such as Airborne Laser Scanning (ALS), Mobile Laser Scanning (MLS), and Terrestrial Laser Scanning (TSL) have been leveraged to allow continuous monitoring of regional power networks, which are typically surrounded by dense vegetation. In this article, an unsupervised Machine Learning (ML) framework is proposed, to detect, extract and analyze the characteristics of power lines of both high and low voltage, as well as the surrounding vegetation in a Power Line Corridor (PLC) solely from LiDAR data. Initially, the proposed approach eliminates the ground points from higher elevation points based on statistical analysis that applies density criteria and histogram thresholding. After denoising and transforming of the remaining candidate points by applying Principle Component Analysis (PCA) and Kd-tree, power line segmentation is achieved by utilizing a two-stage DBSCAN clustering to identify each power line individually. Finally, all high elevation points in the PLC are identified based on their distance to the newly segmented power lines. Conducted experiments illustrate that the proposed framework is an agnostic method that can efficiently detect the power lines and perform PLC-based hazard analysis.
description: Accepted in the 22nd World Congress of the International Federation of Automatic Control [IFAC WC 2023]
Data Management Outreach Efforts @ University Of Florida (Uf) - Usa
Creators: name: Smith, Plato
Publisher: name: Zenodo
Year: 2017
Subjects: Data management outreach
Data management planning
Data management training

description: This presentation is a part of the Minute Madness Session on Tuesday 21 February 2017 in the main plenary room (Wolfson Hall QCC). The related conference poster  is "Developing Data Management Planning Competencies and Outreach at the University of Florida".
description: These activities were made possible through collaborations between the Data Management and Curation Working Group, UF Research Computing, UF Informatics Institute, and UF Division of Sponsored Programs.
Quartic Gradient Flow
Creators: name: Hong, Muzi
name: Jinno, Ryusuke
Publisher: name: arXiv
Year: 2023
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Saddle-point configurations, such as the Euclidean bounce and sphalerons, are known to be difficult to find numerically. In this Letter we study a new method, Quartic Gradient Flow, to search for such configurations. The central idea is to introduce a gradient-flow-like equation in such a way that all the fluctuations around the saddle-point have eigenvalues that are square of the eigenvalues of the original quadratic operator. We illustrate how the method works for the Euclidean bounce and sphalerons.
description: 8 pages, 4 figures
КИШЕЧНЫЙ ДИСБАКТЕРИОЗ
Creators: name: Исакова, Насиба
name: Усмонова, Гуллола
Publisher: name: Zenodo
Year: 2024

description: Кожа и слизистые оболочки человека являются домом для сотен видов микроорганизмов. Более 60% всех микробов попадают в желудочно-кишечный тракт, остальные — в дыхательную и мочевыделительную системы[1,2]. Микроорганизмы, живущие в желудочно-кишечном тракте, имеют большое значение для человека. Они покрывают слизистую внутренних органов, предотвращают развитие инфекционных заболеваний и проникновение болезнетворных бактерий.
Additional file 2 of Whole genome-scale assessment of gene fitness of Novosphingobium aromaticavorans during spaceflight
Creators: name: Sharma, Gayatri
name: Zee, Peter C.
name: Zea, Luis
name: Curtis, Patrick D.
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Supplementary Material 2
Leaky exciton condensates in transition metal dichalcogenide moiré bilayers
Creators: name: Remez, Benjamin
name: Cooper, Nigel R.
Publisher: name: arXiv
Year: 2021
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We show that the "dark condensates" that arise when excitons form a Bose-Einstein condensate in a material with an indirect bandgap are not completely dark to optical emission. Rather, such states are "leaky condensates" in which optical emission is facilitated by many-body interactions. We analyze the properties of these leaky condensates in the context of twisted bilayers of transition metal dichalcogenides, which host strongly interacting excitons and an indirect bandgap. We show that this interaction-driven "leaky" emission dominates photoluminescence at low temperatures, with distinctive qualitative features. Finally, we propose that in these materials, unique intervalley physics can lead to crystal symmetry-breaking excitonic ordering, with implications for optical processes.
description: 4+6 pages, 2+1 figures. v2: Forthcoming Letter in Physical Review Research
Supplemental Material, arsenic_lung_bladder_ca_appendix_3_rev1 - Low-Level Exposure to Arsenic in Drinking Water and Risk of Lung and Bladder Cancer: A Systematic Review and Dose–Response Meta-Analysis
Creators: name: Boffetta, Paolo
name: Borron, Claire
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: FOS: Clinical medicine
subject: 110320 Radiology and Organ Imaging

description: Supplemental Material, arsenic_lung_bladder_ca_appendix_3_rev1 for Low-Level Exposure to Arsenic in Drinking Water and Risk of Lung and Bladder Cancer: A Systematic Review and Dose–Response Meta-Analysis by Paolo Boffetta and Claire Borron in Dose-Response
Mitochondrial genome of Sitka spruce assembled using chromium reads
Creators: name: Jackman, Shaun D
name: Vandervalk, Benjamin P
name: Warren, René L
name: Mohamadi, Hamid
name: Chu, Justin
name: Yeo, Sarah
name: Coombe, Lauren
name: Pleasance, Stephen
name: Coope, Robin J
name: Joerg Bohlmann
name: Jones, Steven JM
name: İnanç Birol
Publisher: name: F1000Research
Year: 2017

description: Long-read sequencing technologies have greatly improved assembly contiguity, but at a cost roughly ten times that of short-read sequencing technology. For population studies and when sequencing large genomes, such as conifer genomes and other economically important crop species, this cost may be prohibitive. The 10x Genomics Chromium technology generates linked reads from large molecules at a cost comparable to standard short-read sequencing technologies. Whereas paired-end sequencing gives two reads from a small DNA fragment, Chromium yields roughly a hundred reads from molecules with a typical size of 10 to 100 kilobases. This technology has been applied to assemble genomes as large as the human genome.

Here we demonstrate its utility to localize assemblies of genomic loci, in particular isolating the organellar genomes from the 20 gigabase Sitka spruce (Picea sitchensis) nuclear genome. We have reported earlier the assembly of the plastid genome of Sitka spruce using the Gemcode technology, the precursor of Chromium. Using the Chromium technology, we have now assembled the mitochondrial genome of Sitka spruce. Our preliminary draft assembles 75% of the estimated six megabase mitochondrial genome in 15 scaffolds larger than 100 kbp.

Animal mitochondrial genomes are typically quite small, tens of kilobases, and plant mitochondria are often much larger, hundreds of kilobases. Conifer mitochondria are, in contrast, surprisingly large, nearly six megabases for white spruce (Picea glauca). With a mere two gymnosperm mitochondria in NCBI Genbank and a single conifer mitochondrion, few examples of these mysteriously large organellar genomes are available. Our results will thus be of interest to evolutionary biology researchers beyond the field of forestry genomics.

Chromium reads permit cost-effective assembly of large genomes with high-throughput, short-read sequencing technology, while also providing large-molecule scaffolding data. Here we assemble Chromium reads using ABySS 2.0, which uses one-tenth the memory of previous versions, and only a few hundred gigabytes of RAM for large conifer genomes.
WFKW_MCRR_05282019_AppendixTables – Supplemental material for Peering Behind the Veil: Trends in Types of Contracts Between Private Health Plans and Hospitals
Creators: name: Ellerie Weber
name: Floyd, Eric
name: Youngran Kim
name: Chapin White
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 111799 Public Health and Health Services not elsewhere classified
subject: FOS: Health sciences
subject: 160807 Sociological Methodology and Research Methods
subject: FOS: Sociology

description: Supplemental material, WFKW_MCRR_05282019_AppendixTables for Peering Behind the Veil: Trends in Types of Contracts Between Private Health Plans and Hospitals by Ellerie Weber, Eric Floyd, Youngran Kim and Chapin White in Medical Care Research and Review
Classical values of Zeta, as simple as possible but not simpler
Creators: name: Holtz, Olga
Publisher: name: arXiv
Year: 2023
Subjects: subject: History and Overview (math.HO)
subject: Combinatorics (math.CO)
subject: Complex Variables (math.CV)
subject: Number Theory (math.NT)
subject: FOS: Mathematics
subject: 11M06, 11Y35, 11Y70, 05A15, 01A50, 01A55, 01A70

description: This short note for non-experts means to demystify the tasks of evaluating the Riemann Zeta Function at non-positive integers and at even natural numbers, both initially performed by Leonhard Euler. Treading in the footsteps of G. H. Hardy and others, I re-examine Euler's work on the functional equation for the Zeta function, and explain how both the functional equation and all `classical' integer values can be obtained in one sweep using only Euler's favorite method of generating functions. As a counter-point, I also present an even simpler argument essentially due to Bernhard Riemann, which however requires Cauchy's residue theorem, a result not yet available to Euler. As a final point, I endeavor to clarify how these two methods are organically linked and can be taught as an intuitive gateway into the world of Zeta functionology.
description: 10 page, 1 figure
Additional file 2 of Circular RNA circ0001955 promotes cervical cancer tumorigenesis and metastasis via the miR-188-3p/NCAPG2 axis
Creators: name: Wang, Wei
name: Luo, Haixia
name: Chang, Jingjing
name: Yang, Xin
name: Zhang, Xiu
name: Zhang, Qingmei
name: Li, Yuanxing
name: Zhao, Yueyang
name: Liu, Jianbing
name: Zou, Binbin
name: Hao, Min
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Additional file 2: Figure S1  Screening upregulated circular RNAs in CSCC tissues.
Additional file 1 of The association between psychological distress, abusive experiences, and help-seeking among people with intimate partner violence
Creators: name: Zhang, Bohan
name: Wong, Arkers
name: Constantino, Rose E.
name: Hui, Vivian
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy
subject: Mental Health

description: Supplementary Material 1
Chirality locking charge density waves in a chiral crystal
Creators: name: Li, Geng
name: Yang, Haitao
name: Jiang, Peijie
name: Wang, Cong
name: Cheng, Qiuzhen
name: Tian, Shangjie
name: Han, Guangyuan
name: Lei, Hechang
name: Shen, Chengmin
name: Lin, Xiao
name: Ji, Wei
name: Wang, Ziqiang
name: Gao, Hong-Jun
Publisher: name: arXiv
Year: 2021
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: In Weyl semimetals, charge density wave (CDW) order can spontaneously break the chiral symmetry, gap out the Weyl nodes, and drive the material into the axion insulating phase. Investigations have however been limited since CDWs are rarely seen in Weyl semimetals. Here, using scanning tunneling microscopy/spectroscopy, we report the discovery of a novel unidirectional CDW order on the (001) surface of chiral crystal CoSi - a unique Weyl semimetal with unconventional chiral fermions. The CDW is incommensurate with both lattice momentum and crystalline symmetry directions, and exhibits an intra unit cell π phase shift in the layer stacking direction. The tunneling spectrum shows a particle-hole asymmetric V-shaped energy gap around the Fermi level that modulates spatially with the CDW wave vector. Combined with first-principle calculations, we identify that the CDW is locked to the crystal chirality and is related by a mirror reflection between the two enantiomers of the chiral crystal. Our findings reveal a novel correlated topological quantum state in chiral CoSi crystals and raise the potential for realizing an axion insulator and exploring the unprecedented physical behaviors of unconventional chiral fermions.