cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1: of Reviewing clinical guideline development tools: features and characteristics
Creators: name: Khodambashi, Soudabeh
name: Nytrø, Øystein
Publisher: name: Figshare
Year: 2017
Subjects: subject: Space Science
subject: Medicine
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology

description: Details of the tools analysis. The additional file elaborated in details, when necessary, on the analysis of the reviewed tools (MAGICapp, GRADEpro, BRIDGE-Wiz, Håndboka, and Internet Portal) according to the presented results in Table 3. Each bold title represents the theme according to the uncovered themes in Table 2. (PDF 187 kb)
Dere miroshnikovi Vives 2015
Creators: name: Barševskis, Arvīds
name: Barševska, Zeltīte
name: Vanaga, Anarina
name: Borodina, Olga
name: Roze, Liāna
name: Pilace, Sanda
name: Mantilla, Leslae Kay Cataytay
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Dere
Dere miroshnikovi

description: 4. Dere miroshnikovi Vives, 2015
Philippines: Mindoro isl., Mt. Halcon, 04.2018 (1, local collector leg.).
Compsocerini
description: Published as part of Barševskis, Arvīds, Barševska, Zeltīte, Vanaga, Anarina, Borodina, Olga, Roze, Liāna, Pilace, Sanda & Mantilla, Leslae Kay Cataytay, 2021, To the knowledge of long-horned beetles (Coleoptera: Cerambycidae) of the Oriental Region (with new synonymy). Part 4, pp. 229-247 in Baltic Journal of Coleopterology 21 (2) on page 231, DOI: 10.5281/zenodo.10905476
Additional file 1: Figure S1. of Progression of arterial stiffness is associated with changes in bone mineral markers in advanced CKD
Creators: name: Rathika Krishnasamy
name: Sven-Jean Tan
name: Hawley, Carmel
name: Johnson, David
name: Stanton, Tony
name: Lee, Kevin
name: Mudge, David
name: Campbell, Scott
name: Grahame Elder
name: Toussaint, Nigel
name: Isbel, Nicole
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biophysics
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Hematology

description: Flow diagram of recruitment. (DOCX 35Â kb)
Pamphilites abdita
Creators: name: Jong, Rienk De
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Hesperiidae
Pamphilites
Pamphilites abdita

description: abdita. Pamphilites abdita Scudder, 1875
Hesperiidae: Hesperiinae.
France, Bouches-du-Rhône, Aix-en-Provence; Chattian–Aquitanian, Late Oligocene–early Miocene.
Depositories: MVMF (holotype lost); MNHN (neotype: IPM B-24308).
Published figures: Scudder (1875: Pl. III, Figs. 14, 17, 18); Leestmans (1983: Figs 11, 12); Nel & Nel (1986: Fig. 1 a-b, Pl. I Fig. 1).
One forewing only. All veins originate from the cell, showing attribution of the fossil to the Hesperiidae; the character recurs in a few subordinate taxa in other superfamilies, but associated with different wing shape. Origin of M2 closer to M3 than to M1, within the Hesperiidae a unique but non-universal character of the Hesperiinae (Ackery et al. 1999). Wing shape and spotting agree with this subfamily.
Scudder thought it probable that the fossil wing belonged to a female, apparently only because he found a resemblance with Pansydia mesogramma Latreille (now in Atalopedes), a species of the Greater Antilles in which the male has a stigma. The fossil wing lacks any trace of a stigma, but so do the males of many Hesperiinae. Scudder also found a resemblance with Carystus lucasii (Fabricius), now Turesis lucas (Fabricius), a South American species. Therefore, he decided a South American relationship for this European fossil. Scudder remarked that R4 terminated on the termen close to the apex. I have not seen this condition in any Hesperiidae, R4 always terminating on the costa just or well before the apex.
The type of the fossil species seems to be lost, and Nel & Nel (1986) designated a neotype that seems to be conspecific with it. They correctly remarked that the venation and markings agree with numerous extant Hesperiinae species in the Old World and New World, so that a South American affinity of the fossil species is not obvious. If used for calibration, the fossil should be used as an estimated minimum age for the root of Hesperiinae.
description: Published as part of Jong, Rienk De, 2017, Fossil butterflies, calibration points and the molecular clock (Lepidoptera: Papilionoidea), pp. 1-63 in Zootaxa 4270 (1) on page 15, DOI: 10.5281/zenodo.583183
Additional file 2: Figure S1. of Evolution of mobile genetic element composition in an epidemic methicillin-resistant Staphylococcus aureus: temporal changes correlated with frequent loss and gain events
Creators: name: Jamrozy, Dorota
name: Coll, Francesc
name: Mather, Alison
name: Harris, Simon
name: Harrison, Ewan
name: MacGowan, Alasdair
name: Karas, Andreas
name: Elston, Tony
name: M. Estée Török
name: Parkhill, Julian
name: Peacock, Sharon
Publisher: name: Figshare
Year: 2017
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Prevalence of isolates representing CC5, CC22 and CC30 between 2001 and 2010. Shown as % of S. aureus isolates in each year. Error bars show 95% confidence intervals. Figure S2 (A, B). Unrooted maximum likelihood tree of S. aureus isolates belonging to CC22 (A) or CC30 (B). Both lineages were composed predominantly of EMRSA isolates; red branches show clades representing the EMRSA-15 (A) and EMRSA-16 (B) clones. Figure S3. Relationship between the probability of MGE carriage and the root-to-tip distance in MRSA CC22 isolates. Curve based on prediction from logistic regression model. Figure S4. Annual macrolide prescription items in England between 2001 and 2010. A prescription item refers to a single item prescribed on a prescription form. Copyright NHSBSA 2013. This information is licenced under the terms of the Open Government Licence: http://www.nationalarchives.gov.uk/doc/open-government-licence/version/3 . Figure S5. Prevalence of P1-ermC carriage and erythromycin resistance in MRSA CC22 isolates between 2001 and 2010. Shown as % of MRSA CC22 isolates in each year. Figure S6. Median of pairwise SNP distances between MRSA CC22 isolates each year between 2001 and 2010. (DOCX 1420 kb)
Luteicenus congruus Holzschuh 2019
Creators: name: Barševskis, Arvīds
name: Barševska, Zeltīte
name: Vanaga, Anarina
name: Borodina, Olga
name: Roze, Liāna
name: Pilace, Sanda
name: Mantilla, Leslae Kay Cataytay
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Luteicenus
Luteicenus congruus

description: 5. Luteicenus congruus Holzschuh, 2019 (Fig. 1.)
China: Guangxi, Jinxiu, Mt. Dayaoshan, 1100 m, 05.2017 (1, local collector leg.).
description: Published as part of Barševskis, Arvīds, Barševska, Zeltīte, Vanaga, Anarina, Borodina, Olga, Roze, Liāna, Pilace, Sanda & Mantilla, Leslae Kay Cataytay, 2021, To the knowledge of long-horned beetles (Coleoptera: Cerambycidae) of the Oriental Region (with new synonymy). Part 4, pp. 229-247 in Baltic Journal of Coleopterology 21 (2) on page 231, DOI: 10.5281/zenodo.10905476
Faces in the frame
Creators: name: Bahmer, Mieke Paulsen
Publisher: name: No Publisher Supplied
Year: 2015

description: Satyric and comedic masks, in addition to lively-seeming heads that could almost be masks, appear with pattern-like regularity wherever the Romans had a foothold; however, the near instinctive impulse to assign a straightforward, Hellenistically-derived Dionysiac message to the borders where these faces reside has rendered both masks and heads almost invisible to further iconographic study. The masks are more thoroughly examined as remnants of Classical theatre than in studies of antique mosaics, while the heads that supplant them are treated neither in theatrical studies nor, aside from stylistic analyses, in art historical scholarship.    The assumption that satyrs (and their depictions) in the Roman world retained the same meanings and functions that had been given to them by their Greek originators ignores fundamental distinctions between the two cultures. This study follows in the tradition of scholars who have jettisoned the belief that iconological interpretation inevitably accompanies iconographic appropriation.  This study uses the distinctly Roman cultural background that led to the use of masks as border motifs in early imperial Roman mosaics, and the ways in which that cultural heritage may have influenced the a preference for more lifelike and idealized heads instead of masks, to gain insight into the role and function of the supernatural wilderness in Roman life and iconography.
Dryopea excavatipennis Breuning 1965
Creators: name: Barševskis, Arvīds
name: Barševska, Zeltīte
name: Vanaga, Anarina
name: Borodina, Olga
name: Roze, Liāna
name: Pilace, Sanda
name: Mantilla, Leslae Kay Cataytay
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Dryopea
Dryopea excavatipennis

description: 6. Dryopea excavatipennis Breuning, 1965
Vietnam: Bao Loc, Lam Dong, 03.2020 (1, local collector leg.).
This species was described by Breuning (1965) from Laos, Thakhek Region. This species was recorded also in China, Yunnan Province (Lin, Tavakilian, 2019). New species for the fauna of Vietnam.
description: Published as part of Barševskis, Arvīds, Barševska, Zeltīte, Vanaga, Anarina, Borodina, Olga, Roze, Liāna, Pilace, Sanda & Mantilla, Leslae Kay Cataytay, 2021, To the knowledge of long-horned beetles (Coleoptera: Cerambycidae) of the Oriental Region (with new synonymy). Part 4, pp. 229-247 in Baltic Journal of Coleopterology 21 (2) on page 232, DOI: 10.5281/zenodo.10905476
Cyclotosaurus buechneri Witzmann & Sachs & Nyhuis 2016, sp. nov.
Creators: name: Witzmann, Florian
name: Sachs, Sven
name: Nyhuis, Christian J.
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Amphibia
Capitosauridae
Cyclotosaurus
Cyclotosaurus buechneri

description: Cyclotosaurus buechneri sp. nov.
Figures 2, 3
LSID urn:lsid:zoobank.org:act: BEA3C090-24EC-4E39- BE5D-74898812C1A0. Date of registration: 20 March 2016.
 2000 Cyclotosaurus robustus. – Schoch and Milner, p. 154.
 2008a Cyclotosaurus robustus. – Büchner, p. 134, fig.
 2008b Cyclotosaurus robustus. – Büchner, fig. 8.
 2013 Amphibienschädel (amphibian skull). – Büchner, fig. 3.03–6.
Derivation of name: In honor of Dr. Martin Büchner, former director of the Museum of Natural History in Bielefeld. Martin Büchner discovered the holotype and only known specimen in 1975, and has a life-long record of outstanding contributions to the museum’s geological collection and the popularization of geosciences in the region.
Holotype and only specimen: Namu ES/k 36053, an almost complete cranium in dorsal view, embedded in sandstone with the palate and occiput obscured.
Type locality and horizon: Bielefeld, district Sieker, North Rhine-Westphalia, northwestern Germany; Stuttgart Formation, middle Carnian, Late Triassic.
 Diagnosis: A species within Cyclotosaurus with the following unique combination of characters: (1) orbitae medially placed with short interorbital distance (shared with C. robustus); (2) region lateral to orbitae only slightly wider than width of orbitae (shared with C. posthumus, C. ebrachensis, C. intermedius, and C. mordax); (3) postorbital skull region slender (shared with C. ebrachensis); (4) preorbital projection of jugal shorter than half the length of snout (shared with C. mordax, C. ebrachensis, C. intermedius, C. posthumus, and C. hemprichi, but dissimilar to C. robustus).
description: Published as part of Witzmann, Florian, Sachs, Sven & Nyhuis, Christian J., 2016, A new species of Cyclotosaurus (Stereospondyli, Capitosauria) from the Late Triassic of Bielefeld, NW Germany, and the intrarelationships of the genus, pp. 83-100 in Fossil Record 19 (2) on page 86, DOI: 10.5194/fr-19-83-2016, http://zenodo.org/record/11589242
Myromeus luzonicus Fisher 1925
Creators: name: Barševskis, Arvīds
name: Barševska, Zeltīte
name: Vanaga, Anarina
name: Borodina, Olga
name: Roze, Liāna
name: Pilace, Sanda
name: Mantilla, Leslae Kay Cataytay
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Myromeus
Myromeus luzonicus

description: 7. Myromeus luzonicus Fisher, 1925
Philippines: Luzon isl., Quirino, Madela, Disimungal, Sierra Madre, 11.2017 (1, local collector leg.).
description: Published as part of Barševskis, Arvīds, Barševska, Zeltīte, Vanaga, Anarina, Borodina, Olga, Roze, Liāna, Pilace, Sanda & Mantilla, Leslae Kay Cataytay, 2021, To the knowledge of long-horned beetles (Coleoptera: Cerambycidae) of the Oriental Region (with new synonymy). Part 4, pp. 229-247 in Baltic Journal of Coleopterology 21 (2) on page 232, DOI: 10.5281/zenodo.10905476
A study of retrograde transport using Caenorhabditis elegans intestinal cells as a model
Creators: name: Bai, Zhiyong
Publisher: name: No Publisher Supplied
Year: 2015

description: Endocytosis mediates the internalization of cell surface proteins and lipids in small vesicles that bud from the plasma membrane and deliver their cargo to endosomes. When cargo proteins reach the endosomes, one important pathway that they may follow is retrograde transport, in which cargos are delivered from endosomes to the Golgi apparatus. The role of the recycling endosome in retrograde transport has not been studied well in the past. We use C. elegans, especially the intestinal cells, as model to study retrograde trafficking, employing a combination of genetics, cell biology, biochemistry and molecular biology tools.  We discovered that CDC-42/TOCAs/PARs/WAVE localize to the recycling endosome, and regulate retrograde transport at a step from Recycling endosome to Trans-Golgi Network. When missing functional CDC-42/TOCAs/PARs/WAVE, MIG-14/Wntless is misdirected to the late endosome/lysosome during post-endocytic sorting, and steady-state MIG-14 protein levels are strongly reduced. Neuronal polarity defects in mechanosensory neurons ALM are also observed under these conditions, consistent with a defect in MIG-14-dependent WNT signaling. Interestingly, we also found that mutants lacking retromer components SNX-3, VPS-35, VPS-26, or VPS-29, that aberrantly degrade MIG-14 during retrograde transport, also aberrantly degrade the human Transferrin receptor during early endosome to recycling endosome transport.  Furthermore, we tested TGN-38, the worm homolog of  a well known retrograde cargo TGN38 that passes through the recycling endosome.  When missing functional CDC-42, TGN-38 is mainly trapped at the recycling endosome, while upon loss of functional  SNX-3, TGN-38 is trapped at the early endosome. These results suggest CDC-42/TOCAs/PARs/WAVE regulate retrograde transport at a step from Recycling endosome to the Trans-Golgi Network after SNX-3/VPS-35/VPS-26/VPS-29, which regulates early endosome to recycling endosome transport. Lastly, we obtained evidence that CDC-42/TOCAs/PARs/WAVE complex may use clathrin/AP-1 vesicles, and that OCRL-1/CKII may work with CDC-42/TOCAs/PARs/WAVE and regulate retrograde transport from the recycling endosome to Trans-Golgi Network. We hope that our work will shed light on the study of intracellular trafficking, especially retrograde transport.
Dynamine alexae
Creators: name: Jong, Rienk De
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Nymphalidae
Dynamine
Dynamine alexae

description: alexae. Dynamine alexae Peñalver & Grimaldi, 2006
Nymphalidae: Biblidinae.
Dominican Republic, Cordillera Septentrional between Santago and Puerto Plata, Dominican Amber; Aquitanian, early Miocene.
Depository: AMNH (holotype, DR-18-2).
Published figures: Peñalver & Grimaldi (2006: Figs 3–5).
Most of the left wings with the color pattern still partly preserved, abdomen with male genitalia and distal part of mid- and hind legs. The allocation of the fossil to the extant genus Dynamine (Nymphalidae, Biblidinae) is based on the striking wing pattern, the dark brown abdomen with a white underside, and the rounded outer margin of the hindwing without expansions or tails. It is similar to the extant genus Lucinia, that however has larger wing ocelli and the margin of the hindwing is not rounded. No further structural reasons for the allocation of the fossil are given. Unfortunately, the apomorphy of Biblidinae (the hypandrium) is not mentioned or discussed in Peñalver & Grimaldi (2006), although they extensively discuss the genitalia that are adjacent to the hypandrium (cf. Freitas & Brown 2004). This is regrettable since wing pattern is more likely attributable to convergence and mimicry than to structural characters. This issue is exemplified by the remark by Peñalver & Grimaldi (2006) that a similar pattern is found in Lucinia. In the expansive analysis of Nymphalidae by Wahlberg et al. (2009), the subfamily is split into two monophyletic groups. In Wahlberg et al. (2009) Dynamine and Lucinia are in the same group, but distant from each other, with Dynamine being the first offshoot of the group (of which 18 genera have been included), while Lucinia is five divergence events later nearer to the crown. These relationships suggest that their similarity is either due to convergence, or alternatively to a symplesiomorphy. In the absence of structural arguments, and if the fossil is used for calibration, then it should be placed near the root of the Biblidinae. This is precisely where Wahlberg et al. (2009) put the calibration point. However, they put a minimum date on this point of 20 Ma. According to Iturralde-Vinent & MacPhee (1996), the age of Dominican amber is 15–20 Ma. By choosing the higher age, the derived divergence estimate may be 33 % too high, if 15 Ma would be the correct age for the amber.
description: Published as part of Jong, Rienk De, 2017, Fossil butterflies, calibration points and the molecular clock (Lepidoptera: Papilionoidea), pp. 1-63 in Zootaxa 4270 (1) on page 15, DOI: 10.5281/zenodo.583183
A software framework for an agile manufacturing system
Creators: name: Bank, Hasan Sinan
Publisher: name: No Publisher Supplied
Year: 2015

description: Manufacturing systems suffer from the limitation of the workspace. This limitation -due dimensions of the available workspace- increases by enlarging the dimensions of machine-tools for the volumnious or slender parts' fabrication in 3D printing or CNC machining (i.e. aircraft fuselage, wind turbine propeller etc.). Regardless of the size of a machine tool, an infrastructure on the shop-floor is another important constraint for machining or 3D printing. Instead of striving to fabricate parts within these troubling constrains, we conjured up an idea of an agile and bio-inspired robot. In order to keep the solution simple and utilitarian, we plan our initial efforts as a semi-reactive and mobile robotic system which requires computations to couple between the input geometry (e.g. a computer aided design file) to the robot's control for utilizing the digital manufacturing.  This thesis presents a pre-computation and simulation tool for mobile digital manufacturing platform. This software platform is specifically developed for a hex-legged robot –Siemens' Spiders [SiSpis]. In thesis, we also emphasize the details of the robot's design; mathematical and physical aspects for the main software algorithms. This software produce Gcode output –fabrication commands– in order to move robot's body center and the robot's arm as needed. We also highlight our future work about the robot's operating system that imports the G-Code commands and use those commands to control the body and arm; to locate the robot in global and local space.
Multi-scale modeling of wet granulation processes
Creators: name: Barrasso, Dana
Publisher: name: No Publisher Supplied
Year: 2015

description: Wet granulation is a particle design process used to create larger granules from fine powder, improving flowability, compactibility, and homogeneity. Although it is widely used in the food, pharmaceutical, detergent, and fertilizer industries, it is often operated inefficiently, with high recycle ratios in continuous processes and high rejection rates in batch processes. In pharmaceutical applications, wet granulation is a critical step in tablet manufacturing that affects the uniformity and compactibility of the final dosage form. A model-based approach can be used to understand the effects of process parameters and material properties on critical quality attributes, developing a knowledge space for Quality by Design. Population balance modeling (PBM) provides a fundamental framework for tracking changes in particle properties over time, though it requires rate expressions and empirical parameters that cannot easily be measured. Discrete element modeling (DEM) is more mechanistic, tracking particles as they move through space and collide, but does not consider the complex mechanisms involved in wet granulation. Through this thesis, a multi-dimensional PBM for a continuous wet granulation process is presented. Model calibration and validation are performed using experimental data. A multi-scale PBM-DEM framework is developed and demonstrated using mechanistic rate expressions to enhance predictive capabilities. The multi-scale model is applied to realistic systems using computationally efficient techniques.
Pseudoclodia lateralis
Creators: name: Barševskis, Arvīds
name: Barševska, Zeltīte
name: Vanaga, Anarina
name: Borodina, Olga
name: Roze, Liāna
name: Pilace, Sanda
name: Mantilla, Leslae Kay Cataytay
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Pseudoclodia
Pseudoclodia lateralis

description: 8. Pseudoclodia lateralis (Aurivillius, 1927)
Philippines: Luzon isl., Ifugao, Banaue, 06.2015 (1, local collector leg.).
description: Published as part of Barševskis, Arvīds, Barševska, Zeltīte, Vanaga, Anarina, Borodina, Olga, Roze, Liāna, Pilace, Sanda & Mantilla, Leslae Kay Cataytay, 2021, To the knowledge of long-horned beetles (Coleoptera: Cerambycidae) of the Oriental Region (with new synonymy). Part 4, pp. 229-247 in Baltic Journal of Coleopterology 21 (2) on page 232, DOI: 10.5281/zenodo.10905476
Theory of mind and the role of target individuals' group affiliation
Creators: name: Batiste, Frank Richard
Publisher: name: No Publisher Supplied
Year: 2015

description: Theory of Mind (ToM) is the ability to interpret the behavior of others in terms of underlying mental states such as beliefs, wants, desires (Premack and Woodruff, 1978). The simulation theory of ToM claims that an individual replicates, or mirrors, the assumed mental states of a target individual and processes them using his/her own mental architecture--the same architecture that is used to make decisions based on one's own beliefs, desires, or thoughts. Thus, ToM may be considered as a form of empathy, a process where the perception of a target’s state generates a state in the observer that is more applicable to the target’s situation than to the subject’s own prior situation (Preston and de Waal, 2002). The experience of emotional empathy is influenced by coalitional cues such as familiarity (Liew, Han, and Aziz-Zadeh, 2011), similarity (Xu, Zuo, Wang, and Han, 2009), and shared group membership (Avenanti, Sirigu, and Aglioti, 2010), as well as immediate situational cues such as the color of a target's tee shirt (Kurzban, Tooby, and Cosmides, 2001), or simply referring to a counterpart in a task as a partner or opponent (Burnham, McCabe, and Smith, 2000). To date, the effect of such immediate coalitional cues has not been tested for ToM. In the present study, a ToM task was designed to test subjects' perspective taking ability in response to one of three different conditions, a neutral frame, a cooperative frame, or a competitive frame. Two types of perspective-taking errors were recorded: incorrect responses and response hesitations. It was predicted that subjects would 1) make significantly fewer errors on the task in the cooperative frame relative to the other two conditions, and 2) make significantly more errors in the competitive condition. Partial support of these predictions was found. ToM was sensitive to cues of coalition, but only for one type of error, hesitations. While cooperative and competitive conditions were marginally significantly different from each other in the expected direction (subjects in the cooperative frame made fewer perspective taking errors than subjects in the competitive frame), neither differed significantly from the control condition.
The terrestrial climate record from the Turkana Basin, Kenya
Creators: name: Beck, Catherine Clifford
Publisher: name: No Publisher Supplied
Year: 2015

description: Lacustrine records are powerful achieves of terrestrial paleoclimate and paleoenvironment as they are highly sensitive to small-scale changes in a given system. Located in the heart of one of the richest Plio-Pleistocene fossil localities, the Turkana Basin has long been of interest to scientists seeking to understand the climatic conditions surrounding our species’ origins. Additionally, at present this semi-arid region hangs in a delicate balance due to global climate change and anthropogenic impacts threatening to forever alter Lake Turkana’s ecosystems. Understanding the system as it is today is essential for unlocking the full potential of the paleorecords. This study increases the understanding of how changes in paleoenvironment and paleoclimate are preserved in lacustrine sediments by applying lessons learned and models developed from a) modern/Common Era studies to the paleorecords of b) the Holocene Lake Turkana highstand, c) the Pleistocene Lorenyang Lake from the West Turkana Kaitio drill core (WTK). Each interval was studied either from cores or outcrops independently before being synthesized to analyze Turkana system through space and time. I produced sedimentological and stratigraphic descriptions (including a detailed facies model for the WTK core), generated high-resolution ostracod assemblages, and collected stable isotope data on ostracods from each time interval. Ultimately, my research demonstrates that ostracods are sensitive to hydrological changes, particularly, lacustrine transgressions and/or regressions through otherwise sedimentologically homogeneous intervals. This demonstrates the potential for this kind of high-resolution study to better understand the roll that paleoclimatic and paleoenvironmental oscillations might have played in early hominin evolution.
On the Thermal Behavior Response of Laminated Composite Plates via FEM
Creators: name: SEHOUL Mohammed
name: BENDAHANE Khaled
name: BOUGUENINA Otbi
name: SEHOUL Baghdad
Publisher: name: Zenodo
Year: 2024
Subjects: Numerical Modeling, Composite Plate, Thermal Stresses, Finite Elements.

description: Abstract

This research work was devoted to finite element numerical modeling of the thermal behavior in temperature variation of composite material plates. This plate is made up of three layers of a symmetrical laminate and subjected to thermal loads in the form of a thermal gradient. The aim is to highlight the different states of thermal stress responsible for damage to the structure. We adopt quadrangle finite elements at four nodes with two degrees of freedom per node, the results obtained in the form of a nodal solution show in great detail the stress most influenced on composite plates among three different stresses. In this numerical modeling, we try to highlight the problem of variation in the temperature of the composite material plate, and to visualize the results to be able to derive the optimal Young's modulus ratio and the best orientation of the fibers under stress. Thermal load. The types and architectures of laminate were the subject of a detailed analysis. To predict the thermal behavior of composite plates and the influences of type and architectures of laminates on thermal stresses, numerical analysis by EF was performed and the results are expressed as graphs. The scenario analyzed is the stress field in Cartesian coordinates as a function of the fiber orientation angle, thermal load and the orthotropic ratio. The parameters that influence thermal behavior of thermal gradient materials are: time, applied thermal load, laminate type and material architecture Thermal variation is a key factor that controls thermal behaviors. Finite element numerical modeling also shows the state of thermal behavior of the laminated plates, characterized by the maximum thermal stress. The results of this modeling also make it possible to define a cold room manufacturing strategy.
The genetic characterization of Northeastern Quercus associated Xylella fastidiosa populations
Creators: name: Behringer, Gregory
Publisher: name: No Publisher Supplied
Year: 2015

description: Xylella fastidiosa is broad-host-range plant pathogen responsible for significant commodity crop damage in much of the Western Hemisphere.  Since its description in 1892, focus has centered around disease associated with Vitis (grape) hosts.  Shade tree host studies of X. fastidiosa populations, however, have been both sparse and regionally oriented, making the exploration of infected oak stands an important area for greater understanding of this phytopathogen.        To describe novel genetic profiles of the oak associated pathogen, Northeastern and Mid-Atlantic populations were assessed both phylogenetically and with Principal Component Analyses (PCA) and Minimum Spanning Trees (MSN).  Polymerase chain reaction (PCR) based locus recoveries identified previously undescribed genetic diversity and phylogenetically separated oak associated populations based on host geography.  Expanded analysis of insertion/deletion regions associated with the oak pathogen was also conducted for fine separation of populations relative to phylogenetic recoveries.  Together these provided an efficient means to track the spread of the pathogen at the population level.        To further explore genetic diversity in understudied X. fastidiosa oak populations, the genome of a Northeastern Quercus palustris associated X. fastidiosa isolate, RNB1, was sequenced and analyzed.  Existing isolate comparisons described several novel RNB1 genomic regions, including two potential vir genes, and a Gene Ontology procyclic repeat pathogenesis locus.  This work provided the first comparative look at an oak associated X. fastidiosa genome and described its composition relative to well described isolates.         A final search for novel population specific markers in X. fastidiosa colonies targeted prophage segments.  Thirteen regions across nineteen genomes were qualitatively described, with phage repressor and terminase suggestive of previously confirmed phylogenetic relatedness at an integrated phage-based locus.  This data was then used in several machine learning approaches and proved accurate in predicting taxonomic categories across disparate X. fastidiosa populations when trained with matrix transforms of host specific X. fastidiosa prophage regions.  This final study described evolutionary significance of widely profiled prophage regions and introduced an algorithmic approach for future large-scale genetically themed X. fastidiosa based population studies.  Overall, the work herein presents previously undescribed genetic aspects of oak associated X. fastidiosa populations and posits a novel method for future data synthesis.
Stochastic approach for fine sediment erosion prediction
Creators: name: Behzadnejad, Faezeh
Publisher: name: No Publisher Supplied
Year: 2015

description: This study aimed to characterize the erosion behavior of cohesive sediments in the Newark Bay, at flow velocities below 1 m/s based on their index properties. The experimental methodology and data interpretation scheme of this research were devised based on the critical analysis of previous literature and aimed to reduce uncertainty, subjectivity, and arbitrariness. A comparison of erosion measurements obtained in this study with the results of some in-situ experiments conducted by other researchers revealed a strong consistency between these studies. The fact that this ex-situ study has been as successful as in-situ studies is quite an achievement. The success of the devised experimental methodology was also highlighted when the results were compared to similar ex-situ studies because the range of erosion rates measured in this study was well beyond the capability of those methods.  This research contributes to the literature on cohesive sediment erosion by offering new insights into three primary areas: regression, stochastic, and probabilistic analysis of erosion test results.  First, this study employed the regression technique to obtain the best linear unbiased estimator of erosion rates based on sediment index properties. The analysis resulted in the development of two fairly valid models for both fine- and coarse-grained sediments of the Newark Bay: (1) Newark Bay Fine Model (NBFM) and (2) Newark Bay Coarse Model (NBCM). These models were evaluated through cross-validation and cross-model comparison, as well as validation against a new dataset.  Second, a new methodology was developed for a stochastic analysis of erosion data by applying the Monte Carlo simulation technique. To the best of the author’s knowledge, this technique had not been previously used in sediment erosion studies. This robust stochastic method enabled the researcher to investigate erosion over many artificially generated samples, in lieu of measured data, and make more realistic predictions. The confidence interval provided by stochastic simulations has a significant application in sediment erosion risk analysis.  Third, the framework developed for the probabilistic analysis of erosion data offers a standardized methodology for data analysis that paves the way for the comparison of different studies that use inconsistent methodologies.
Additional file 1: of Job satisfaction and turnover intentions among health care staff providing services for prevention of mother-to-child transmission of HIV in Dar es Salaam, Tanzania
Creators: name: Naburi, Helga
name: Phares Mujinja
name: Kilewo, Charles
name: Orsini, Nicola
name: BĂ¤Rnighausen, Till
name: Manji, Karim
name: Biberfeld, Gunnel
name: Sando, David
name: Geldsetzer, Pascal
name: Chalamila, Guerino
name: EkstrĂśm, Anna
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Questionnaire on health care provider job satisfaction. (DOCX 102Â kb)
Rondibilis quadrinotata
Creators: name: Barševskis, Arvīds
name: Barševska, Zeltīte
name: Vanaga, Anarina
name: Borodina, Olga
name: Roze, Liāna
name: Pilace, Sanda
name: Mantilla, Leslae Kay Cataytay
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Rondibilis
Rondibilis quadrinotata

description: 9. Rondibilis quadrinotata (Pic, 1925)
Vietnam: Lai Chau, 06.2020 (1, local collector leg.).
description: Published as part of Barševskis, Arvīds, Barševska, Zeltīte, Vanaga, Anarina, Borodina, Olga, Roze, Liāna, Pilace, Sanda & Mantilla, Leslae Kay Cataytay, 2021, To the knowledge of long-horned beetles (Coleoptera: Cerambycidae) of the Oriental Region (with new synonymy). Part 4, pp. 229-247 in Baltic Journal of Coleopterology 21 (2) on page 232, DOI: 10.5281/zenodo.10905476
Lubricogobius Tanaka 1915
Creators: name: Chen, I-Shiung
name: Liao, Yun-Chih
name: Ho, Lin-Tai
name: Shao, Kwang-Tsao
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Perciformes
Gobiidae
Lubricogobius

description: Lubricogobius Tanaka, 1915
Lubricogobius Tanaka, 1915: 567
(type species, L. exiguus Tanaka, 1915).
Gobiodonella Lindberg, 1934: 437 (type species, G. macrops Lindberg, 1934).
description: Published as part of Chen, I-Shiung, Liao, Yun-Chih, Ho, Lin-Tai & Shao, Kwang-Tsao, 2024, A new species of marine gobiid fish genus Lubricogobius (Teleostei: Gobiidae) from the Philippines, pp. 183-188 in Zootaxa 5550 (1) on page 184, DOI: 10.11646/zootaxa.5550.1.18, http://zenodo.org/record/14388707
Additional file 5: Figure S5. of Cytotoxicity of replication-competent adenoviruses powered by an exogenous regulatory region is not linearly correlated with the viral infectivity/gene expression or with the E1A-activating ability but is associated with the p53 genotypes
Creators: name: Yamauchi, Suguru
name: Boya Zhong
name: Kawamura, Kiyoko
name: Yang, Shan
name: Kubo, Shuji
name: Shingyoji, Masato
name: Sekine, Ikuo
name: Tada, Yuji
name: Tatsumi, Koichiro
name: Shimada, Hideaki
name: Hiroshima, Kenzo
name: Tagawa, Masatoshi
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology
subject: Computational Biology

description: Transcriptional activity of the regulatory region in target cells. The same data in TableÂ 5 were used. Averages and SEs are shown (nÂ =Â 3) (PDF 155 kb)
Development of recycled plastic composites for structural applications from CEA plastics
Creators: name: Bhalla, Agrim
Publisher: name: No Publisher Supplied
Year: 2015

description: Plastic waste from consumer electronic appliances (CEAs) such as computer and printer parts including Polystyrene (PS), Acrylonitrile Butadiene Styrene (ABS), Polystyrene (PS) and PC/ABS were collected using handheld FTIR Spectrophotometer. The blends of these plastics with High Density Polyethylene (HDPE) are manufactured under special processing conditions in a single screw compounding injection molding machine. The blends are thermoplastics have high stiffness and strength, which may enhance the mechanical properties of HDPE like tensile modulus, ultimate tensile strength, tensile break and tensile yield. These composites have a potential to be used for the future application of recycled plastic lumber, thus replacing the traditional wood lumber.
Investigation of biodegradable poly(anhydride-esters) hydrolysis through in vitro modeling and kinetic analyses
Creators: name: Bien-Aime, Stephan
Publisher: name: No Publisher Supplied
Year: 2015

description: Chemical incorporation of bioactives into polymers allows for their controlled and sustained delivery. Poly(anhydride-esters) (PAEs) are predominantly surface-eroding polymers, providing sustained release of bioactives. Compared to physical formulations, PAEs are capable of achieving higher bioactive loading (50 – 80 %) and have the versatility of being formulated into different geometries (discs, films), hence offering the potential to satisfy diverse administration routes in drug delivery. In this thesis, biodegradable polymers that contain salicylic acid and pinosylvin as bioactives within PAEs are employed, and their hydrolysis investigated.    In one approach, a novel agar-based in vitro model mimicking the in vivo environment of the mandibular bone defect in diabetic animals was developed. Localized and systemic release profiles of salicylic acid from salicylic acid-based PAEs were evaluated. A sustained localized SA release was observed for 70 days. This study shows the agar-based system is a preferred model to mimic the in vivo mandibular bone defect environment, and may be an appropriate method to mimic in vivo pharmacokinetics of other drugs in related animal models.  In another approach, pinosylvin was chemically incorporated into a PAE backbone via melt-condensation polymerization, and fully characterized with respect to its physicochemical and thermal properties. In vitro release studies in phosphate buffered saline (pH 7.4) demonstrated that pinosylvin-based polymers underwent slow hydrolytic degradation. Pseudo-first order kinetic experiments on butyric anhydride and 3-butylstilbene ester model compounds showed the anhydride underwent faster hydrolysis [k = (30.6 ± 2.24) × 10-6 L mol-1 s-1] than the ester [k = (56.7 ± 5.01) × 10-7 L mol-1 s-1)]. These results suggest that in solution, the anhydride linkages of pinosylvin PAEs are more labile and hydrolyzed first, followed by hydrolytic cleavage of the ester bonds to release pinosylvin. A disc diffusion antibacterial assay showed polymer release media exhibited similar bioactivity as free pinosylvin. In vitro cytocompatibility studies demonstrated that the polymer was non-cytotoxic towards fibroblasts up to 0.5 μg/mL. Based upon the results, pinosylvin-based polymers are slowly degradable biomaterials that provide antibacterial activity, and thus can serve as food additives into common food packaging materials for food preservation and food safety.
Scapexocentrus philipinus Vives 2020
Creators: name: Barševskis, Arvīds
name: Barševska, Zeltīte
name: Vanaga, Anarina
name: Borodina, Olga
name: Roze, Liāna
name: Pilace, Sanda
name: Mantilla, Leslae Kay Cataytay
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Scapexocentrus
Scapexocentrus philipinus

description: 10. Scapexocentrus philipinus Vives, 2020
Philippines: Mindoro isl., Baco, 05.2016 (1, local collector leg.); Panay isl., Antique, Qulasi, 03.2018 (1, local collector leg.), 04.2018 (2, local collector leg.), 05.2018 (3, local collector leg.), 06.2018 (1, local collector leg.), 08.2018 (1, local collector leg.), 01.2019 (1, local collector leg.).
This species was recently described by Vives (2020) from Mindoro island, Mt. Halcon (Philippines). Later it was recorded from Mindanao Island by Mantilla et al. (2021). This is the first faunistic data for this species for Panay Island, the Philippines.
description: Published as part of Barševskis, Arvīds, Barševska, Zeltīte, Vanaga, Anarina, Borodina, Olga, Roze, Liāna, Pilace, Sanda & Mantilla, Leslae Kay Cataytay, 2021, To the knowledge of long-horned beetles (Coleoptera: Cerambycidae) of the Oriental Region (with new synonymy). Part 4, pp. 229-247 in Baltic Journal of Coleopterology 21 (2) on page 232, DOI: 10.5281/zenodo.10905476
Independent and interactive effects of real-time risk factors on later temptations and lapses among smokers trying to quit
Creators: name: Bold, Krysten Williams
Publisher: name: No Publisher Supplied
Year: 2015

description: Research on the proximal influences on smoking relapse has focused primarily on the independent effects of risk factors, yet relapse may also be governed by complex, interactive processes. The current study sought to expand our understanding of relapse mechanisms by identifying the independent and interactive effects of real-time risk factors on temptations and the ability to resist temptations in smokers during a quit attempt. This study was a secondary analysis of ecological momentary assessment data collected from 109 treatment-seeking smokers 4 times a day for 21 days following a quit attempt. All smokers received nicotine replacement therapy and smoking cessation counseling. Multinomial hierarchical linear models were used to evaluate ways momentary impulsiveness, affect, urge, cigarette exposure, alcohol use and their interactions predicted temptations and smoking up to 8 hours later. Level-one data comprised report-level predictors and outcomes nested within individuals at level-two. Results suggested temptations were predicted by higher momentary agitation, distress, and urge; and lower positive affect. The inability to resist temptations was predicted by prior smoking, higher distress, and recent alcohol use. There were significant interactions between level-one predictors that influenced the risk of temptations (positive affect x impulsiveness, urge x agitation, agitation x cigarette exposure, urge x cigarette exposure) and the odds of resisting a temptation (alcohol x impulsiveness). These results suggest studies of complex relationships between proximal risk factors may provide new information about relapse processes and inform smoking cessation interventions.
Additional file 6: Figure S6. of Cytotoxicity of replication-competent adenoviruses powered by an exogenous regulatory region is not linearly correlated with the viral infectivity/gene expression or with the E1A-activating ability but is associated with the p53 genotypes
Creators: name: Yamauchi, Suguru
name: Boya Zhong
name: Kawamura, Kiyoko
name: Yang, Shan
name: Kubo, Shuji
name: Shingyoji, Masato
name: Sekine, Ikuo
name: Tada, Yuji
name: Tatsumi, Koichiro
name: Shimada, Hideaki
name: Hiroshima, Kenzo
name: Tagawa, Masatoshi
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology

description: Individual data of Ad-mediated cytotoxicity and transcriptional activity in respective cells. The summary of correlation coefficient is shown in TableÂ 6. Correlation coefficient (C) and P value are also shown (PDF 177 kb)
Additional file 1: of Preterm birth: the role of knowledge transfer and exchange
Creators: name: Hacsi Horvath
name: Brindis, Claire
name: E. Reyes
name: Yamey, Gavin
name: Franck, Linda
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Methods for searching the knowledge transfer and exchange research literature. (DOCX 15Â kb)
Aegoprepes antennator Pascoe 1871
Creators: name: Barševskis, Arvīds
name: Barševska, Zeltīte
name: Vanaga, Anarina
name: Borodina, Olga
name: Roze, Liāna
name: Pilace, Sanda
name: Mantilla, Leslae Kay Cataytay
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Aegoprepes
Aegoprepes antennator

description: 11. Aegoprepes antennator Pascoe, 1871
Malaysia: Borneo isl., Sabah, Mt. Trus Madi, 10.2004 (1, local collector leg.).
description: Published as part of Barševskis, Arvīds, Barševska, Zeltīte, Vanaga, Anarina, Borodina, Olga, Roze, Liāna, Pilace, Sanda & Mantilla, Leslae Kay Cataytay, 2021, To the knowledge of long-horned beetles (Coleoptera: Cerambycidae) of the Oriental Region (with new synonymy). Part 4, pp. 229-247 in Baltic Journal of Coleopterology 21 (2) on page 232, DOI: 10.5281/zenodo.10905476