cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
An experimental proof that resistance-switching memories are not memristors
Creators: name: Kim, J.
name: Pershin, Y. V.
name: Yin, M.
name: Datta, T.
name: Di Ventra, M.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Emerging Technologies (cs.ET)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: It has been suggested that all resistive-switching memory cells are memristors. The latter are hypothetical, ideal devices whose resistance, as originally formulated, depends only on the net charge that traverses them. Recently, an unambiguous test has been proposed [J. Phys. D: Appl. Phys. {\bf 52}, 01LT01 (2019)] to determine whether a given physical system is indeed a memristor or not. Here, we experimentally apply such a test to both in-house fabricated Cu-SiO2 and commercially available electrochemical metallization cells. Our results unambiguously show that electrochemical metallization memory cells are not memristors. Since the particular resistance-switching memories employed in our study share similar features with many other memory cells, our findings refute the claim that all resistance-switching memories are memristors. They also cast doubts on the existence of ideal memristors as actual physical devices that can be fabricated experimentally. Our results then lead us to formulate two memristor impossibility conjectures regarding the impossibility of building a model of physical resistance-switching memories based on the memristor model.
Synthesis of model predictive control based on data-driven learning
Creators: name: Zhou, Yuanqiang
name: Li, Dewei
name: Xi, Yugeng
name: Gan, Zhongxue
Publisher: name: arXiv
Year: 2019
Subjects: subject: Optimization and Control (math.OC)
subject: Systems and Control (eess.SY)
subject: FOS: Mathematics
subject: FOS: Electrical engineering, electronic engineering, information engineering

description: For the application of MPC design in on-line regulation or tracking control problems, several studies have attempted to develop an accurate model, and realize adequate uncertainty description of linear or non-linear plants of the processes. In this study, we employ the data-driven learning technique to iteratively approximate the dynamical parameters, without requiring a priori knowledge of system matrices. The proposed MPC approach can predict and optimize the future behaviors using multiorder derivatives of control input as decision variables. Because the proposed algorithm can obtain a linear system model at each sampling, it can adapt to the actual dynamics of time-varying or nonlinear plants. This methodology can serve as a data-driven identification tool to study adaptive optimal control problems for unknown complex systems.
description: 4 pages
Additional file 5 of Genome-wide identification and expression analysis of the B-box transcription factor gene family in grapevine (Vitis vinifera L.)
Creators: name: Zhang, Xiuming
name: Zhang, Li
name: Ji, Miaomiao
name: Wu, Yifei
name: Zhang, Songlin
name: Zhu, Yanxun
name: Yao, Jin
name: Li, Zhi
name: Gao, Hua
name: Wang, Xiping
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 5: Table S1. The motif sequences of BBX proteins identified by MEME tools
Gromilus granissimus
Creators: name: Morrone, Juan J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Gromilus
Gromilus granissimus

description: Gromilus granissimus (Broun, 1917)
 Phygothalpus granissimus Broun, 1917: 436 (type locality: New Zealand: Mistake Basin, west of Mount Algidus, 3000 feet; type material: H: BMNH).
 Gromilus granissimus; Kuschel, 1964: 459.
 Distribution. New Zealand (Schenkling and Marshall, 1929).
description: Published as part of Morrone, Juan J., 2011, Annotated checklist of the tribe Listroderini (Coleoptera: Curculionidae: Cyclominae) 3119, pp. 1-68 in Zootaxa 3119 (1) on page 22, DOI: 10.11646/zootaxa.3119.1.1, http://zenodo.org/record/5246257
MPEC 2024-B59 : 2024 BK1
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2024
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469
subject: 2024 BK1

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
No small hairs in anisotropic power-law Gauss-Bonnet inflation
Creators: name: Do, Tuan Q.
name: Nguyen, Sonnet Hung Q.
Publisher: name: arXiv
Year: 2019
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: We will examine whether anisotropic hairs exist in a string-inspired scalar-Gauss-Bonnet gravity model with the absence of potential of scalar field during the inflationary phase. As a result, we are able to obtain the Bianchi type I power-law solution to this model under the assumption that the scalar field acts as the phantom field, whose kinetic is negative definite. However, the obtained anisotropic hair of this model turns out to be large, which is inconsistent with the observational data. We will therefore introduce a nontrivial coupling between scalar and vector fields such as $f^2(ϕ)F_{μν}F^{μν}$ into the scalar-Gauss-Bonnet model with the expectation that the anisotropic hair would be reduced to a small one. Unfortunately, the magnitude of the obtained anisotropic hair is still large. These results indicate that the scalar-Gauss-Bonnet gravity model with the absence of potential of scalar field might not be suitable to generate small anisotropic hairs during the inflationary phase.
description: 15 pages, two figures. To be published in Communications in Physics, a leading physical journal in Vietnam
Digital preservation in libraries: an overview
Creators: name: KHAN, IMRAN
Publisher: name: figshare
Year: 2022
Subjects: subject: Library and Information Studies
subject: FOS: Media and communications
subject: 80799 Library and Information Studies not elsewhere classified
subject: 80706 Librarianship

description: Khan, Imran. (2020). Digital preservation in libraries: an overview. Journal of Advancements in Library Sciences 7(2): pp. 40-48 (ISSN: 2349-4352).
Gromilus halli
Creators: name: Morrone, Juan J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Gromilus
Gromilus halli

description: Gromilus halli (Broun, 1917)
 Clypeorhynchus halli Broun, 1917: 433 (type locality: New Zealand: Holliford; type material: H: BMNH). Gromilus halli; Kuschel, 1964: 459.
 Distribution. New Zealand (Schenkling and Marshall, 1929).
description: Published as part of Morrone, Juan J., 2011, Annotated checklist of the tribe Listroderini (Coleoptera: Curculionidae: Cyclominae) 3119, pp. 1-68 in Zootaxa 3119 (1) on page 22, DOI: 10.11646/zootaxa.3119.1.1, http://zenodo.org/record/5246257
Additional file 7 of An exploratory investigation of glucocorticoids, personality and survival rates in wild and rehabilitated hedgehogs (Erinaceus europaeus) in Denmark
Creators: name: Rasmussen, Sophie Lund
name: Kalliokoski, Otto
name: Dabelsteen, Torben
name: Abelson, Klas
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 7. PC scores for the novel object tests’ data.
Strongly bent double-stranded DNA: reconciling theory and experiment
Creators: name: Drozdetski, Aleksander V.
name: Mukhopadhyay, Abhishek
name: Onufriev, Alexey V.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Biological Physics (physics.bio-ph)
subject: Soft Condensed Matter (cond-mat.soft)
subject: Biomolecules (q-bio.BM)
subject: FOS: Physical sciences
subject: FOS: Biological sciences

description: The strong bending of polymers is poorly understood. We propose a general quantitative framework of polymer bending that includes both the weak and strong bending regimes on the same footing, based on a single general physical principle. As the bending deformation increases beyond a certain (polymer-specific) point, the change in the convexity properties of the effective bending energy of the polymer makes the harmonic deformation energetically unfavorable: in this strong bending regime the energy of the polymer varies linearly with the average bending angle as the system follows the convex hull of the deformation energy function. For double-stranded DNA, the effective bending deformation energy becomes non-convex for bends greater than about 2 degrees per base-pair, equivalent to the curvature of a closed circular loop of about 160 base pairs. A simple equation is derived for the polymer loop energy that covers both the weak and strong bending regimes. The theory shows quantitative agreement with recent DNA cyclization experiments on short DNA fragments, while maintaining the expected agreement with experiment in the weak bending regime. Counter-intuitively, cyclization probability (j-factor) of very short DNA loops is predicted to increase with decreasing loop length; the j-factor reaches its minimum for loops of 45 base pairs. Atomistic simulations reveal that the attractive component of the short-range Lennard-Jones interaction between the backbone atoms can explain the underlying non-convexity of the DNA effective bending energy, leading to the linear bending regime. Applicability of the theory to protein-DNA complexes, including the nucleosome, is discussed.
Gromilus impressus
Creators: name: Morrone, Juan J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Gromilus
Gromilus impressus

description: Gromilus impressus (Broun, 1893)
 Clypeorhynchus impressus Broun, 1893a: 1212 (type locality: New Zealand: Mount Maungatua, Taieri; type material: H: BMNH).
 Gromilus impressus; Kuschel, 1964: 459.
 Distribution. New Zealand (Schenkling and Marshall, 1929).
description: Published as part of Morrone, Juan J., 2011, Annotated checklist of the tribe Listroderini (Coleoptera: Curculionidae: Cyclominae) 3119, pp. 1-68 in Zootaxa 3119 (1) on page 22, DOI: 10.11646/zootaxa.3119.1.1, http://zenodo.org/record/5246257
Imperfect Competition in a Spatial Model: Review of Literature and Application to an European Dairy Industry Model
Creators: name: Bouamra-Mechemache, Zohra
name: Yu, Jianyu
name: Réquillart, Vincent
name: Bouamra-Mechemache, Zohra
name: Yu, Jianyu
name: Réquillart, Vincent
Publisher: name: Unknown
Year: 2005
Subjects: subject: Agricultural and Food Policy
subject: Research Methods/ Statistical Methods
subject: spatial model
subject: imperfect competition
subject: milk and dairy products
subject: agricultural policy
subject: milk quota

description: This paper analyses imperfect competition in a spatial model that is applied to the European dairy industry. We show how imperfect competition can be introduced within the dairy industry model developed by Bouamra et al. (2002). We then simulate four scenarios that differ in the assumptions on competition. We show that the existence of market power significantly modifies the implicit price of milk components, may lead to an increase in EU exports and that domestic prices are not adequate indicators of competitiveness in the presence of market power. Distribution in surplus among agents is changed and large welfare losses may be generated.
Evaluating the Benefits from Liberalization: are Standard Walrassian Models Relevant?
Creators: name: Boussard, Jean-Marc
name: Gérard, Françoise
name: Piketty, Marie Gabrielle
name: Boussard, Jean-Marc
name: Gérard, Françoise
name: Piketty, Marie Gabrielle
Publisher: name: Unknown
Year: 2005
Subjects: Agricultural and Food Policy
Research Methods/ Statistical Methods

description: While measuring the benefits from liberalisation is obviously important, from a theoretical as well as from a political point of view, one may question the validity of the presently widespread Walrassian approach. The latter does not take account of the fact that supply is just as must (and perhaps more) risk as (average) price responsive. Now, it turns out that if (contrary to the strong versions of the “rational expectation hypothesis”), producers do not take their decisions on the basis of equilibrium prices only, then the market, instead of equilibrium, can generate very harmful seemingly random fluctuations. These considerations are incorporated into a partial equilibrium model of the world sugar industry, and a GTAP style general equilibrium model of the world economy. In both cases, liberalisation, preventing price stabilisation policies, results in more instability, and a decrease in welfare. Such an outcome is specific of agriculture and other low price elasticity commodities.
Additional file 1: of “Unrigging the support wheels” - A qualitative study on patients’ experiences with and perspectives on low-intensity CBT
Creators: name: Haller, Elisa
name: Besson, Nicole
name: Watzke, Birgit
Publisher: name: figshare
Year: 2019
Subjects: subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Interview guide. (DOCX 22 kb)
Detecting malicious logins as graph anomalies
Creators: name: Powell, Brian A.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Cryptography and Security (cs.CR)
subject: Machine Learning (cs.LG)
subject: FOS: Computer and information sciences

description: Authenticated lateral movement via compromised accounts is a common adversarial maneuver that is challenging to discover with signature- or rules-based intrusion detection systems. In this work a behavior-based approach to detecting malicious logins to novel systems indicative of lateral movement is presented, in which a user's historical login activity is used to build a model of putative "normal" behavior. This historical login activity is represented as a collection of daily login graphs, which encode authentications among accessed systems. Each system, or graph vertex, is described by a set of graph centrality measures that characterize it and the local topology of its login graph. The unsupervised technique of non-negative matrix factorization is then applied to this set of features to assign each vertex to a role that summarizes how the system participates in logins. The reconstruction error quantifying how well each vertex fits into its role is then computed, and the statistics of this error can be used to identify outlier vertices that correspond to systems involved in unusual logins. We test this technique with a small cohort of privileged accounts using real login data from an operational enterprise network. The ability of the method to identify malicious logins among normal activity is tested with simulated graphs of login activity representative of adversarial lateral movement. We find that the method is generally successful at detecting a broad range of lateral movement for each user, with false positive rates significantly lower than those resulting from alerts based solely on login novelty.
description: 10 pages, 8 figures. Major revisions, expanded analysis
Additional file 4 of Transtibial versus independent femoral tunnel drilling techniques for anterior cruciate ligament reconstruction: evaluation of femoral aperture positioning
Creators: name: Haroun, Haitham K.
name: Abouelsoud, Maged M.
name: Allam, Mohamed R.
name: Abdelwahab, Mahmoud M.
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 4. Femoral aperture localization strategy utilized in TT and TI technique in included studies.
Additional file 8 of An exploratory investigation of glucocorticoids, personality and survival rates in wild and rehabilitated hedgehogs (Erinaceus europaeus) in Denmark
Creators: name: Rasmussen, Sophie Lund
name: Kalliokoski, Otto
name: Dabelsteen, Torben
name: Abelson, Klas
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 8. Personality. A table presenting the division of individuals into shy or bold based on their behaviour in the three personality tests. Shy behaviour is indicated by S and bold by B.
Gromilus inophloeoides
Creators: name: Morrone, Juan J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Gromilus
Gromilus inophloeoides

description: Gromilus inophloeoides (Broun, 1904)
 Clypeorhynchus inophloeoides Broun, 1904: 117 (type locality: New Zealand: Invercargill; type material: H: BMNH).
 Gromilus inophloeoides; Kuschel, 1964: 459.
 Distribution. New Zealand (Schenkling and Marshall, 1929).
description: Published as part of Morrone, Juan J., 2011, Annotated checklist of the tribe Listroderini (Coleoptera: Curculionidae: Cyclominae) 3119, pp. 1-68 in Zootaxa 3119 (1) on page 23, DOI: 10.11646/zootaxa.3119.1.1, http://zenodo.org/record/5246257
Different conformations of the German shepherd dog breed affect its posture and movement
Creators: name: Humphries, A.
name: Shaheen, A. F.
name: Gómez Álvarez, C. B.
Publisher: name: Apollo - University of Cambridge Repository
Year: 2020
Subjects: Article
/631/601/1737
/631/601/1332
article

description: Funder: The Kennel Club Charitable Trust
description: Abstract: The conformation of the German shepherd dog (GSD) varies considerably within the breed. These differences may result in large variation in the movement and limb loading and undesirable consequences to their musculoskeletal health. This study aimed to investigate the relationship between conformation and biomechanical measures in 60 GSDs. Full body kinematic and kinetic measures were computed from 3D motion capture and pressure data. The dogs were divided into groups based on their back slope and curvature. Correlation analysis and statistical differences between groups showed that GSDs with a greater back slope have a greater contact area in their forelimbs and place them closer together when standing (n = 60). During trot, the dogs with sloped back showed a greater vertical force in the forelimbs and a greater mid-thoracic flexion (n = 60). Unilateral differences were found in the stifle flexion, hock flexion and hock adduction, suggesting greater movement asymmetry with an increase in the back slope (n = 30). In conclusion, several biomechanical parameters are affected by the GSD’s slope of the back and not by its curvature. Further studies are required to determine whether the variation in movement, posture and conformation within the breed relates to an increased susceptibility to musculoskeletal disorders.
Sugar Policies: An Invincible Bastion for Modelers?
Creators: name: Brockmeier, Martina
name: Sommer, Ulrich
name: Thomsen, Karin
name: Brockmeier, Martina
name: Sommer, Ulrich
name: Thomsen, Karin
Publisher: name: Unknown
Year: 2005
Subjects: Agricultural and Food Policy
Research Methods/ Statistical Methods

description: This paper uses the EU sugar market regime as an example. Accordingly, the second chapter briefly describes the EU sugar market regime. The theoretical part of the paper (Chapter 3) then surveys the literature to document the approaches applied to model sugar policies in partial and general equilibrium models. In the second part of Chapter 3, the Global Trade Analysis Project (GTAP) model is utilized to exemplify different options to implement production quotas. In Chapter 4, the extended GTAP model structure and the GTAP data base (Version 6) are used to simulate the WTO negotiations (e.g., the Harbinson proposal). Thereby, the impact of alternative sugar quota modeling options on model results is identified. Chapter 5 concludes the paper with a summary of the qualifications and the main findings.
A search for giant pulses in Vela-like pulsars
Creators: name: Johnston, Simon
name: Romani, Roger W.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We have carried out a survey for `giant pulses' in 6 young, Vela-like pulsars. In no cases did we find single pulses with flux densities more than 10 times the mean flux density. However, in PSR B1706-44 we have detected giant micro-pulses very similar to those seen in the Vela pulsar. In PSR B1706-44 these giant micro-pulses appear on the trailing edge of the profile and have an intrinsic width of ~1 ms. The cumulative probability distribution of their intensities is best described by a power-law. If the power-law continues to higher intensities, then 3.7x10^6 rotations are required to obtain a pulse with 20 times the mean pulse flux. This number is similar to the giant pulse rate in PSR B1937+21 and PSR B1821-24 but significantly higher than that for the Crab.
description: 6 pages, 5 figures, Accepted for publication in MNRAS
The Population of Galaxies that Contribute to The HI Mass Function
Creators: name: Dutta, Saili
name: Khandai, Nishikanta
name: Dey, Biprateep
Publisher: name: arXiv
Year: 2019
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: We look at the contribution of different galaxy populations to the atomic hydrogen (HI) mass function (HIMF) and the HI density parameter, $Ω_{\text{HI}}$, in the local Universe. Our analysis is based on a sample of 7857 HI-selected galaxies selected from a volume common to the SDSS and ALFALFA surveys (40$\%$ catalog -- $α.40$). We define different populations of galaxies in the color(u-r)-magnitude($M_{\text{r}}$) plane and compute the HIMF for each of them. Additionally we compute the HIMF for dark galaxies; these are undetected in SDSS and represent $\sim 2\%$ of the total sample. We find that the luminous red population dominates the total HIMF for $\log_{10}(M_{\text{HI}}h^2_{70}/M_{\odot}) \geq 10.4$. The full red population -- luminous and faint -- represents about $\sim 17\%$ of the $Ω_{\text{HI}}$ budget, while that of the dark population is $\sim 3\%$. The HIMF about the knee, $\log_{10}(M_{\text{HI}}h^2_{70}/M_{\odot}) \in [8,10.4]$, is dominated by the faint and luminous blue populations, the latter dominating at larger masses in this interval. Their total contribution to $Ω_{\text{HI}}$ is $\sim 55-70\%$, the variation depending on the definition of population. The dominant populations at the low mass end, $\log_{10}(M_{\text{HI}}h^2_{70}/M_{\odot}) \leq 8.0$ are the faint blue and faint bluer populations, the latter's dominance being sensitive to its definition. The full blue (blue--bluer luminous and faint) population represents $\sim 80\%$ of $Ω_{\text{HI}}$. A bimodal HIMF suggested by our results is however not seen since the amplitude of the HIMF of the luminous red population is small compared to that of the luminous blue population.
description: 17 pages, 10 figures, 3 tables, Accepted in MNRAS
Introducing the DiTraRe: Digital Transformation of Research in Four Research Clusters Interwoven with Four Dimensions
Creators: name: Jacyszyn, Anna M.
name: Sack, Harald
name: Bach, Felix
name: Razum, Matthias
name: Noe, Christiane
Publisher: name: Zenodo
Year: 2024
Subjects: digital transformation
digitalisation
knowledge organisation
research data management
artificial intelligence

description: The digital transformation of research affects both academia and society as such. It comprises the adaptation of epistemological processes as well as the transparency and communication of findings. New data-driven methods not only open up innovative approaches for knowledge generation, but also raise legal, ethical and societal questions. Within the newly established Leibniz ScienceCampus “Digital Transformation in Research” (DiTraRe) we investigate the effects of the increasing digitization of scientific work in four research clusters and develop specific solutions based on use cases from various disciplines. In the work package “Protected data spaces” we analyse the use of sensitive data in sports science, in “Smart data acquisition” – the Chemotion Electronic Lab Notebook, while in the research cluster “AI-based knowledge realms” we concentrate on AI in biomedical engineering. And last but not least in the topic of “Publication cultures” we investigate publication of large datasets. In this interdisciplinary project each of these work packages is approached within four different dimensions: exploration and knowledge organisation (including the adoption of different AI methods), legal and ethical challenges, tools and processes, and reflection and resonance.
Quasi Stable Black Holes at the Large Hadron Collider
Creators: name: Hossenfelder, Sabine
name: Hofmann, Stefan
name: Bleicher, Marcus
name: Stoecker, Horst
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We adress the production of black holes at LHC and their time evolution in space times with compactified space like extra dimensions. It is shown that black holes with life times of hundred fm/c can be produced at LHC. The possibility of quasi-stable remnants is discussed.
description: 4 pages, 3 figures, typos removed, omitted factors included, accepted for publication
A heat-shock inducible system for flexible gene expression in cereals
Creators: name: Harrington, Sophie A.
name: Backhaus, Anna E.
name: Fox, Samantha
name: Rogers, Christian
name: Borrill, Philippa
name: Uauy, Cristobal
name: Richardson, Annis
Publisher: name: Apollo - University of Cambridge Repository
Year: 2020
Subjects: Methodology
Inducible promoters
Cre recombinase
Transgenic
Inducible expression
Clonal sectors
Wheat
Barley
Grasses

description: Abstract: Background: Functional characterisation of genes using transgenic methods is increasingly common in cereal crops. Yet standard methods of gene over-expression can lead to undesirable developmental phenotypes, or even embryo lethality, due to ectopic gene expression. Inducible expression systems allow the study of such genes by preventing their expression until treatment with the specific inducer. When combined with the Cre-Lox recombination system, inducible promoters can be used to initiate constitutive expression of a gene of interest. Yet while these systems are well established in dicot model plants, like Arabidopsis thaliana, they have not yet been implemented in grasses. Results: Here we present an irreversible heat-shock inducible system developed using Golden Gate-compatible components which utilises Cre recombinase to drive constitutive gene expression in barley and wheat. We show that a heat shock treatment of 38 °C is sufficient to activate the construct and drive expression of the gene of interest. Modulating the duration of heat shock controls the density of induced cells. Short durations of heat shock cause activation of the construct in isolated single cells, while longer durations lead to global construct activation. The system can be successfully activated in multiple tissues and at multiple developmental stages and shows no activation at standard growth temperatures (~ 20 °C). Conclusions: This system provides an adaptable framework for use in gene functional characterisation in cereal crops. The developed vectors can be easily adapted for specific genes of interest within the Golden Gate cloning system. By using an environmental signal to induce activation of the construct, the system avoids pitfalls associated with consistent and complete application of chemical inducers. As with any inducible system, care must be taken to ensure that the expected construct activation has indeed taken place.
The Role of Pressure in Inverse Design for Assembly
Creators: name: Lindquist, Beth A.
name: Jadrich, Ryan B.
name: Howard, Michael P.
name: Truskett, Thomas M.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: Isotropic pairwise interactions that promote the self assembly of complex particle morphologies have been discovered by inverse design strategies derived from the molecular coarse-graining literature. While such approaches provide an avenue to reproduce structural correlations, thermodynamic quantities such as the pressure have typically not been considered in self-assembly applications. In this work, we demonstrate that relative entropy optimization can be used to discover potentials that self-assemble into targeted cluster morphologies with a prescribed pressure when the iterative simulations are performed in the isothermal-isobaric ensemble. By tuning the pressure in the optimization, we generate a family of simple pair potentials that all self-assemble the same structure. Selecting an appropriate simulation ensemble to control the thermodynamic properties of interest is a general design strategy that could also be used to discover interaction potentials that self-assemble structures having, for example, a specified chemical potential.
description: 29 pages, 8 figures
An Assessment of the Luxembourg Agreement on the Spanish Agricultural Sector: an Econometric Model
Creators: name: Casado, José María
name: Gracia, Azucena
name: Casado, José María
name: Gracia, Azucena
Publisher: name: Unknown
Year: 2005
Subjects: subject: Agricultural and Food Policy
subject: Research Methods/ Statistical Methods
subject: Partial equilibrium model
subject: simulation
subject: CAP reform

description: The main aim of this paper is to build and validate an econometric model for the Spanish agrifood sector that allows for projection and policy simulation under alternative scenarios. We developed an econometric, dynamic, multi-product partial equilibrium commodity model where policy instruments were explicitly introduced in order to allow quantitative analysis of CAP reform scenarios. The Spanish Econometric Simulation of Agricultural Policies (SESAP) model results indicate that the new decoupling measure introduced by the Luxembourg Agreement have mainly impact on the sectors more linked to the new instrument, cereals, oilseed, cattle and beef meat and, sheep and lamb meat. Moreover, only changes in area harvested, number of animals and production for those products have been found.
Gromilus laqueorum Kuschel 1964
Creators: name: Morrone, Juan J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Gromilus
Gromilus laqueorum

description: Gromilus laqueorum Kuschel, 1964
 Gromilus laqueorum Kuschel, 1964: 461 (type locality: New Zealand: Snares Island; type material: H: NZAC and P: 10 BPBM and NZAC).
 Distribution. New Zealand: Snares Island (Kuschel, 1964, 1971).
description: Published as part of Morrone, Juan J., 2011, Annotated checklist of the tribe Listroderini (Coleoptera: Curculionidae: Cyclominae) 3119, pp. 1-68 in Zootaxa 3119 (1) on page 23, DOI: 10.11646/zootaxa.3119.1.1, http://zenodo.org/record/5246257
Catching a glimpse of the parton structure of the bound proton
Creators: name: Fucini, Sara
name: Scopetta, Sergio
name: Viviani, Michele
Publisher: name: arXiv
Year: 2019
Subjects: subject: Nuclear Theory (nucl-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: A new generation of experiments is expected to shed light on the elusive parton structure of the bound proton. One of the most promising directions is incoherent deeply virtual Compton scattering, which can provide a tomographic view of the bound proton. The first measurement has been recently performed, using $^4$He targets at Jefferson Lab. In the work presented here, a rigorous Impulse Approximation analysis of this process is proposed. As ingredients, state-of-the-art models of the nuclear spectral function and of the parton structure of the struck proton, together with novel scattering amplitudes expressions for a bound moving nucleon, have been used. A good overall agreement with the data is obtained, in particular at high values of the photon virtuality. The observed big difference between results for the bound proton and those for the free one turns out to be due in small part to modifications of the parton structure, and rather it should be related to kinematical nuclear effects. The analysis demonstrates that the comparison of the results of this approach, based on a conventional description, with future precise data, has the potential to expose exotic quark and gluon effects in nuclei.
description: 6 pages, 4 figures; minor corrections; references added. Version accepted for publication in Phys. Rev. D, Rapid Communications
The influence of general-relativity effects, dynamical tides and collisions on planet-planet scattering close to the star
Creators: name: Marzari, F.
name: Nagasawa, M.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: Planet--Planet scattering is an efficient and robust dynamical mechanism for producing eccentric exoplanets. Coupled to tidal interactions with the central star, it can also explain close--in giant planets on circularized and potentially misaligned orbits. We explore scattering events occurring close to the star and test if they can reproduce the main features of the observed orbital distribution of giant exoplanets on tight orbits.In our modeling we exploit a numerical integration code based on the Hermite algorithm and including the effects of general relativity, dynamical tides and two--body collisions.We find that P--P scattering events occurring in systems with three giant planets initially moving on circular orbits close to their star produce a population of planets similar to the presently observed one, including eccentric and misaligned close--in planets. The contribution of tides and general relativity is relevant in determining the final outcome of the chaotic phase. Even if two--body collisions dominate the chaotic evolution of three planets in crossing orbits close to their star, the final distribution shows a significant number of planets on eccentric orbits. The highly misaligned close--in giant planets are instead produced by systems where the initial semi--major axis of the inner planet was around 0.2 au or beyond.
description: Accepted for publication on A&A
Gromilus furvus
Creators: name: Morrone, Juan J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Gromilus
Gromilus furvus

description: Gromilus furvus (Broun, 1921)
 Clypeorhynchus furvus Broun, 1921: 642 (type locality: New Zealand; type material: S: BMNH).
 Gromilus furvus; Kuschel, 1964: 459.
 Distribution. New Zealand (Schenkling and Marshall, 1929).
description: Published as part of Morrone, Juan J., 2011, Annotated checklist of the tribe Listroderini (Coleoptera: Curculionidae: Cyclominae) 3119, pp. 1-68 in Zootaxa 3119 (1) on page 22, DOI: 10.11646/zootaxa.3119.1.1, http://zenodo.org/record/5246257
Additional file 9 of An exploratory investigation of glucocorticoids, personality and survival rates in wild and rehabilitated hedgehogs (Erinaceus europaeus) in Denmark
Creators: name: Rasmussen, Sophie Lund
name: Kalliokoski, Otto
name: Dabelsteen, Torben
name: Abelson, Klas
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 9. Results from the novel object test with a badger setup. A table presenting the results from the novel object test with the badger. Total duration: 90 min. “Type” indicates whether the individual was tested in the novel object test scenario with the badger as the first test (NO1) or the second test (NO2). ∆t out is the latency time before the individual left the carrier and entered the arena.
Rational solutions for three semi-discrete modified Korteweg-de Vries type equations
Creators: name: Sun, Yingying
name: Zhao, Songlin
Publisher: name: arXiv
Year: 2019
Subjects: subject: Exactly Solvable and Integrable Systems (nlin.SI)
subject: FOS: Physical sciences

description: In this paper, we consider three semi-discrete modified Korteweg-de Vries type equations which are the nonlinear lumped self-dual network equation,the semi-discrete lattice potential modified Korteweg-de Vries equation and a semi-discrete modified Korteweg-de Vries equation. We derive several kinds of exact solutions, in particular rational solutions, in terms of the Casorati determinant for these three equations respectively. For some rational solutions, we present the related asymptotic analysis to understand their dynamics better.
description: 16 pages, 16 figures
Additional file 5 of Transtibial versus independent femoral tunnel drilling techniques for anterior cruciate ligament reconstruction: evaluation of femoral aperture positioning
Creators: name: Haroun, Haitham K.
name: Abouelsoud, Maged M.
name: Allam, Mohamed R.
name: Abdelwahab, Mahmoud M.
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 5. Metanalyses of direct outcomes.
MOESM2 of Relating the gut metagenome and metatranscriptome to immunotherapy responses in melanoma patients
Creators: name: Peters, Brandilyn
name: Wilson, Melissa
name: Moran, Una
name: Pavlick, Anna
name: Izsak, Allison
name: Wechter, Todd
name: Weber, Jeffrey
name: Osman, Iman
name: Jiyoung Ahn
Publisher: name: figshare
Year: 2019
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Additional file 2. Supplementary Figures S1-S6.
Additional file 6 of Transtibial versus independent femoral tunnel drilling techniques for anterior cruciate ligament reconstruction: evaluation of femoral aperture positioning
Creators: name: Haroun, Haitham K.
name: Abouelsoud, Maged M.
name: Allam, Mohamed R.
name: Abdelwahab, Mahmoud M.
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 6. Metanalyses of indirect outcomes.
Unified Attitude Determination Problem from Vector Observations and Hand-eye Measurements
Creators: name: Wu, Jin
Publisher: name: arXiv
Year: 2019
Subjects: subject: Systems and Control (eess.SY)
subject: FOS: Electrical engineering, electronic engineering, information engineering

description: The hand-eye measurements have recently been proven to be very efficient for spacecraft attitude determination relative to an ellipsoidal asteroid. However, recent method does not guarantee full attitude observability for all conditions. This paper refines this problem by taking the vector observations into account so that the accuracy and robustness of the spacecraft attitude estimation can be improved. The vector observations come from many sources including visual perspective geometry, optical navigation and point clouds that frequently occur in aerospace electronic systems. Completely closed-form solutions along with their uncertainty descriptions are presented for the proposed problem. Experiments using our simulated dataset and real-world spacecraft measurements from NASA dawn spacecraft verify the effectiveness and superiority of the derived solution.
description: IEEE Transactions on Aerospace and Electronic Systems (2020)
Additional file 4 of Genome-wide identification and expression analysis of the B-box transcription factor gene family in grapevine (Vitis vinifera L.)
Creators: name: Zhang, Xiuming
name: Zhang, Li
name: Ji, Miaomiao
name: Wu, Yifei
name: Zhang, Songlin
name: Zhu, Yanxun
name: Yao, Jin
name: Li, Zhi
name: Gao, Hua
name: Wang, Xiping
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 4: Fig. S2. The differences of B-box2 domains of grapevine and Arabidopsis BBX members in Group I and Group II
IDENTIFICATION OF MATERIALS USING AERIAL HYPERSPECTRAL IMAGES
Creators: name: Bekő, László
name: Hunyadi, Gergely
name: Laakso, Kati
name: Nygren, Petri
name: Bekő, László
name: Hunyadi, Gergely
name: Laakso, Kati
name: Nygren, Petri
Publisher: name: Unknown
Year: 2016
Subjects: subject: Environmental Economics and Policy
subject: Research Methods/ Statistical Methods
subject: hyperspectral
subject: airborne remote sensing
subject: target detection
subject: ground truth acquisition
subject: separability

description: The aerial hyperspectral imagery has a large information content and contains data not just only in the visible light spectra but in the near-infrared and the short-wave infrared spectra as well. Due to this, the technology is applicable to examine and detect preferences and conditions that visible identification is not possible or limited. During the last decade, hyperspectral imagery was successfully used for the analysis of vegetation, soil or minerals. During our research the AISA Fenix1K hyperspectral sensor of the Research Institute was used for data collection with the collaboration of experts from the Finnish sensor producer company near to Siófok. The collected aerial hyperspectral data and the ground spectral data as reference were compared and a spectral library of the examined materials was developed for future classifications. The ability to separate various materials was examined with statistical analyses with which we can determine the spectral separability of target objects. The analysis was fulfilled on the original and on transformed channels as well. According to the results we can conclude that the transformed channels are more applicable to separate these materials which was demonstrated on scatter plots too.
Accelerating Physics-Based Simulations Using Neural Network Proxies: An Application in Oil Reservoir Modeling
Creators: name: Navratil, Jiri
name: King, Alan
name: Rios, Jesus
name: Kollias, Georgios
name: Torrado, Ruben
name: Codas, Andres
Publisher: name: arXiv
Year: 2019
Subjects: subject: Machine Learning (cs.LG)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: We develop a proxy model based on deep learning methods to accelerate the simulations of oil reservoirs--by three orders of magnitude--compared to industry-strength physics-based PDE solvers. This paper describes a new architectural approach to this task, accompanied by a thorough experimental evaluation on a publicly available reservoir model. We demonstrate that in a practical setting a speedup of more than 2000X can be achieved with an average sequence error of about 10\% relative to the oil-field simulator. The proxy model is contrasted with a high-quality physics-based acceleration baseline and is shown to outperform it by several orders of magnitude. We believe the outcomes presented here are extremely promising and offer a valuable benchmark for continuing research in oil field development optimization. Due to its domain-agnostic architecture, the presented approach can be extended to many applications beyond the field of oil and gas exploration.
description: 9 pages, submitted to FEED-2019 KDD Workshop & Frontiers in Big Data
Additional file 1 of Integration of family planning services with HIV treatment for women of reproductive age attending ART clinic in Oromia regional state, Ethiopia
Creators: name: Demissie, Dereje Bayissa
name: Mmusi-Phetoe, Rose
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Statistics
subject: FOS: Mathematics
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Additional file 1. German abstract.
Aglomeração Econômica: Transbordamento Econômico de Barragens Hidrelétricas no Brasil
Creators: name: Trotter, Ian Michael
name: Trotter, Ian Michael
Publisher: name: Unknown
Year: 2016
Subjects: Community/Rural/Urban Development
Environmental Economics and Policy
Resource /Energy Economics and Policy

description: Este estudo analise a questão de aglomeração econômica causada por barragens hidrelétricas no Brasil usando métodos para medir efeitos de tratamento. Espera-se que barragens hidrelétricas construidas antes de 1950 causaram aglomeração, pois empresas e indivíduos foram atraidas para as regiões por causa de baixo custo de energia elétrica. Devido a melhoramentos na produção térmica e transmissão de energia elétrica depois do 1950, espera-se que o efeito de aglomeração é menos forte em torno de barragens construidas depois de 1950. Uma estimativa do impacto sem controle sugere que as taxas do crescimento da população dos municípios com barragens hidrelétricas construidas antes de 1950 foram aproximadamente 1.7 pontos percentuais mais altos do que as demais no período de 1910 a 2010. Uma estimativa do impacto considerando a seleção amostral também sugere 1.7 pontos percentuais, enquanto uma estimativa feito com pareamento através de um \textit{propensity score} sugere um impacto mais moderado de 0.5 pontos percentuais. A análise mostra que houve um efeito de aglomeração nesses casos, e ainda mais que essa aglomeração se tornou auto-sustentável, pois não desapareceu no segundo metado do século quando a tecnologia eliminou a vantagem original.
Comparison of Methods for Quantification of Topologically Close-Packed Phases in Ni-Based Superalloys
Creators: name: Wilson, A. S.
name: Christofidou, K. A.
name: Evans, A.
name: Hardy, M. C.
name: Stone, H. J.
Publisher: name: Apollo - University of Cambridge Repository
Year: 2019
Subjects: Article

description: Abstract: The ability to quantify accurately the formation of topologically close-packed phases in nickel-based superalloys is key to assessing their thermal stability and ensuring that their performances will not deteriorate during long-term exposure at high temperatures. To investigate the effectiveness of synchrotron XRD for the detection of such minority phases in Ni-based superalloys, the commercial polycrystalline alloy RR1000 was analyzed following exposures of varying times at 800 °C. Data were collected from both solid samples and extracted residues, and additional laboratory X-ray diffraction was performed on the residues. The minor phases were successfully detected in solid samples using synchrotron radiation, and a comparison of the results from these quantification methods shows that the extraction method gives results of the right order of magnitude to reflect the phase quantities that are present in the alloy. However, the results indicate that the synchrotron route is not a suitable method for the quantification of phases present in quantities less than approximately 0.3 wt pct.