cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Analysis of Mycoplasma gallisepticum isolated from HD3 cells using 2D-DIGE
Creators: name: Matyushkina, Daria
Publisher: name: figshare
Year: 2016
Subjects: subject: 60501 Bacteriology
subject: FOS: Biological sciences
subject: 60307 Host-Parasite Interactions
subject: Parasitology
subject: 60109 Proteomics and Intermolecular Interactions (excl. Medical Proteomics)

description: Chicken HD3 erytroblast cell were infected by bacterium Mycoplasma gallisepticum and cultivated for 24 hours (acute infection) and 7 weeks (chronic infection). After co-cultivation mycoplasmas were isolated from HD3 cells were compared with reference laboratory M. gallisepticum S6 strain using differential 2D electrophoresis with subsequent MALDI-MS analysis. Furthermore, mycoplasma isolated from eukaryotic cells (MIEC) were cultivated for sixteen passages in vitro. And MIEC after each passage was also compared with reference strain.
Excavation on the medieval church of St Thomas, Farlam.
Creators: name: Caruana, Ian D
Publisher: name: Archaeology Data Service
Year: 2002

description: Transactions of the Cumberland & Westmorland Antiquarian & Archaeological Society, 92, 123-134
description: Excavations undertaken to investigate the form of the pre-1860 church confirmed it as a single-celled structure in accordance with existing pictorial depictions. However, the original medieval layout, particularly in the light of comparative examples in the region, can still not be confirmed, and further excavation is called for.
Data used in Ellis et al. from Daylight savings time can decrease the frequency of wildlife–vehicle collisions
Creators: name: Ellis, William A.
name: FitzGibbon, Sean I.
name: Barth, Benjamin J.
name: Niehaus, Amanda C.
name: David, Gwendolyn K.
name: Taylor, Brendan D.
name: Matsushige, Helena
name: Melzer, Alistair
name: Bercovitch, Fred B.
name: Carrick, Frank
name: Jones, Darryl N.
name: Dexter, Cathryn
name: Gillett, Amber
name: Predavec, Martin
name: Lunney, Dan
name: Wilson, Robbie S.
Publisher: name: The Royal Society
Year: 2016
Subjects: subject: Ecology
subject: FOS: Biological sciences
subject: 60801 Animal Behaviour

description: Data from study.
Reversible pebble games and the relation between tree-like and general resolution space
Creators: name: Torán, Jacobo
name: Wörz, Florian
Publisher: name: Universität Ulm
Year: 2021
Subjects: subject: Proof complexity
subject: Tree-like resolution
subject: Pebble game
subject: Reversible pebbling
subject: Prover–Delayer game
subject: Raz–McKenzie game
subject: Clause space
subject: Variable space
subject: Primary 03F20
subject: Secondary 68Q17
subject: DDC 000 / Computer science, information & general works
subject: Resolutions
subject: Resolution

description: We show a new connection between the clause space measure in tree-like resolution and the reversible pebble game on graphs. Using this connection, we provide several formula classes for which there is a logarithmic factor separation between the clause space complexity measure in tree-like and general resolution. We also provide upper bounds for tree-like resolution clause space in terms of general resolution clause and variable space. In particular, we show that for any formula F, its tree-like resolution clause space is upper bounded by space(π)(log(time(π)), where π is any general resolution refutation of F. This holds considering as space(π) the clause space of the refutation as well as considering its variable space. For the concrete case of Tseitin formulas, we are able to improve this bound to the optimal bound space(π)logn, where n is the number of vertices of the corresponding graph
HadISDH.land Update Document version 4.6.0.2023f
Creators: name: Willett, Kate
Publisher: name: Zenodo
Year: 2024

description: Update notes for HadISDH.land.4.6.0.2023f compared to the previous version. This describes any major changes, bug fixes and minor changes, and minor bug fixes and historical updates. It includes their justification and any notable impacts. 

Note that this version has a related dataset on the CEDA archive https://catalogue.ceda.ac.uk/uuid/0a36ca390a5844578905780ed4c78ded.
Therapy-related myelodysplastic syndromes deserve specific diagnostic sub-classification and risk-stratification—an approach to classification of patients with t-MDS
Creators: name: Kuendgen, A.
name: Nomdedeu, M.
name: Tuechler, H.
name: Garcia-Manero, G.
name: Komrokji, R. S.
name: Sekeres, M. A.
name: Della Porta, M. G.
name: Cazzola, M.
name: DeZern, A. E.
name: Roboz, G. J.
name: Steensma, D. P.
name: Van De Loosdrecht, A. A.
name: Schlenk, R. F.
name: Grau, J.
name: Calvo, X.
name: Blum, S.
name: Pereira, A.
name: Valent, P.
name: Costa, D.
name: Giagounidis, A.
name: Xicoy, B.
name: Döhner, H.
name: Platzbecker, U.
name: Pedro, C.
name: Lübbert, M.
name: Oiartzabal, I.
name: Díez-Campelo, M.
name: Cedena, M. T.
name: Machherndl-Spandl, S.
name: López-Pavía, M.
name: Baldus, C. D.
name: Martinez-De-Sola, M.
name: Stauder, R.
name: Merchan, B.
name: List, A.
name: Ganster, C.
name: Schroeder, T.
name: Voso, M. T.
name: Pfeilstöcker, M.
name: Sill, H.
name: Hildebrandt, B.
name: Esteve, J.
name: Nomdedeu, B.
name: Cobo, F.
name: Haas, R.
name: Sole, F.
name: Germing, U.
name: Greenberg, P. L.
name: Haase, D.
name: Sanz, G.
Publisher: name: Universität Ulm
Year: 2020
Subjects: subject: Diagnosis
subject: Risk factors
subject: DDC 610 / Medicine & health

description: Abstract In the current World Health Organization (WHO)-classification, therapy-related myelodysplastic syndromes (t-MDS) are categorized together with therapy-related acute myeloid leukemia (AML) and t-myelodysplastic/myeloproliferative neoplasms into one subgroup independent of morphologic or prognostic features. Analyzing data of 2087 t-MDS patients from different international MDS groups to evaluate classification and prognostication tools we found that applying the WHO classification for p-MDS successfully predicts time to transformation and survival (both p < 0.001). The results regarding carefully reviewed cytogenetic data, classifications, and prognostic scores confirmed that t-MDS are similarly heterogeneous as p-MDS and therefore deserve the same careful differentiation regarding risk. As reference, these results were compared with 4593 primary MDS (p-MDS) patients represented in the International Working Group for Prognosis in MDS database (IWG-PM). Although a less favorable clinical outcome occurred in each t-MDS subset compared with p-MDS subgroups, FAB and WHO-classification, IPSS-R, and WPSS-R separated t-MDS patients into differing risk groups effectively, indicating that all established risk factors for p-MDS maintained relevance in t-MDS, with cytogenetic features having enhanced predictive power. These data strongly argue to classify t-MDS as a separate entity distinct from other WHO-classified t-myeloid neoplasms, which would enhance treatment decisions and facilitate the inclusion of t-MDS patients into clinical studies.
Excavations at Brougham Castle, 1987.
Creators: name: Williams, John H
Publisher: name: Archaeology Data Service
Year: 2002

description: Transactions of the Cumberland & Westmorland Antiquarian & Archaeological Society, 92, 105-122
description: Reports the findings of work at Brougham Castle, lying close to the Roman fort of Brocavum, undertaken as part of a broader survey of the fabric and development of the castle, and here published in advance of completion of the whole. An unexpectedly complex six-phase sequence of development was uncovered, from a possible ditch associated with the Roman fort through early occupation to phase three construction of a substantial rectangular stone building. Later activity involved further wall construction in the area of the chapel and evidence for the later post-medieval refurbishment of the castle, including seventeenth century window glass -- some of it found in seemingly incongruous contexts beneath apparently earlier flagged floors. There are specialist reports on `The pottery' by M R McCarthy & F Wild (117--18), `The glass' by Christine Howard-Davis (118--19), `The metalwork' by Christine Howard-Davis (119--20), `The Roman tiles' by John H Williams (120), `The hone' by John H Williams (120), and`The animal bone' by L Gidney (120--1).
Parr Memorials in Kendal Parish Church.
Creators: name: James, Susan E
Publisher: name: Archaeology Data Service
Year: 2002

description: Transactions of the Cumberland & Westmorland Antiquarian & Archaeological Society, 92, 99-104
description: Describes the late-fifteenth to early-sixteenth century Parr Chapel in the church of Holy Trinity, founded by Sir William Parr. The founder's table tomb of dark limestone or marble is described along with debate surrounding possible later additions made by his son Thomas Parr. Antiquarian references to a memorial window presented by Thomas are somewhat confusing and the true location -- whether at Kendal or Thomas's burial place in London -- cannot be confirmed.
Additional file 1 of Extracorporeal photopheresis reduces inflammation and joint damage in a rheumatoid arthritis murine model
Creators: name: Lin, Yuwei
name: Cheng, Zhanrui
name: Zhong, Yan
name: Zhao, Yinting
name: Xiang, Guifen
name: Li, Ling
name: Tian, Li
name: Liu, Zhong
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 1: Figure S1. The representative dot plot of flow cytometry analysis of mononuclear cells suspension before and after depletion of CD11b+ monocytes by the EasySep™ Mouse CD11b Positive Selection Kit.
The SC cell line as an in vitro model of human monocytes
Creators: name: Duweb, Amira
name: Gaiser, Ann‐Kathrin
name: Stiltz, Isabel
name: El Gaafary, Menna
name: Simmet, Thomas
name: Syrovets, Tatiana
Publisher: name: Universität Ulm
Year: 2022
Subjects: subject: macrophage differentiation
subject: macrophage polarization
subject: macrophage polarization markers
subject: monocyte‐derived macrophages
subject: SC monocytes
subject: DDC 570 / Life sciences
subject: DDC 610 / Medicine & health
subject: Monocytes
subject: Monozyt

description: In vitro analysis of human macrophages is generally hampered by the necessity to differentiate them from peripheral blood monocytes. We have analyzed to which extent noncancerous SC monocytes could be used as an in vitro macrophage model. Macrophages differentiated from peripheral monocytes using standard CSF1 and CSF2 protocols for M2 and M1 precursors, respectively, were compared with THP-1-derived macrophages treated with PMA and with SC-derived macrophages differentiated either by CSF1, CSF2, or PMA according to different protocols. The optimal condition for generation of SC macrophages was treatment with PMA for 3 days, followed by 5-days culture without PMA and 24-h polarization with LPS/IFN-γ or IL-4/IL-13. Similar to THP-1, SC cells do not express the monocyte marker CD14 and differentiation to macrophages results neither in CD68 nor in CD14 expression, both of which were expressed by monocyte-derived macrophages. Similar to THP-1-macrophages, a proportion of SC macrophages can be polarized to the M1-like subtype that is characterized by higher expression of CD38, CD86, CD80, TNF-α, and IL-1ra, whereas treatment with IL4/IL13 did not lead to expression of the M2-associated receptors CD163, CD206, and only slightly increased the CD200R expression. Still, SC-M1 express much lower levels of the M1-associated markers compared with monocyte-derived M1 and no IL-1β. The data demonstrate that SC-derived macrophages differ from monocyte-derived macrophages in respect of their morphology, expression of important macrophage markers, phagocytosis. Yet, polarized SC-M1-like cells may with restrictions serve as a model for M1 macrophages, though this model does not provide significant advantages over already well-described THP-1-M1-like cells.
Additional file 1 of Formononetin reverses Treg/Th17 imbalance in immune-mediated bone marrow failure mice by regulating the PI3K/Akt signaling pathway
Creators: name: Lan, Huixuan
name: Qiu, Wei
name: Wu, Jie
name: Hu, Zhijing
name: Zhang, Xiaomin
name: Zhu, Lingling
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 1: Figure S1. Effects of FMN on CD4 + T cell viability were evaluated using the CCK8 assay.
Net primary productivity in Arctic Ocean from Effects of sea ice cover on satellite-detected primary production in the Arctic ocean
Creators: name: Kahru, Mati
name: Zhongping Lee
name: B. Greg Mitchell
name: Nevison, Cynthia D.
Publisher: name: The Royal Society
Year: 2016
Subjects: subject: Environmental Science
subject: Ecology
subject: FOS: Biological sciences

description: Time Monthly NPP, Pg C NPP per open water area, mgC/m2/day Year Annual NPP, PgC Max monthly NPP, Pg C NPP/area
Additional file 1 of Evaluation of a hospital-initiated tobacco dependence treatment service: uptake, smoking cessation, readmission and mortality
Creators: name: Robins, John
name: Patel, Irem
name: McNeill, Ann
name: Moxham, John
name: Woodhouse, Arran
name: Absalom, Gareth
name: Shehu, Buljana
name: Bruce, Geraldine
name: Dewar, Amy
name: Molloy, Alanna
name: Duckworth Porras, Stephanie
name: Waring, Michael
name: Stock, Andrew
name: Robson, Debbie
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Mental Health
subject: Computational Biology

description: Additional file 1: Table S1. Sample characteristics: Ethnicity subgroups (n=2067). Table S2. Sample characteristics: Smoking cessation aids prescribed (primary). Table S3. Sample characteristics: Smoking cessation aids prescribed (secondary). Table S4. Summary statistics stratified by Accepted intervention at first TDS assessment. Table S5. Summary statistics stratified by Smoking status at 180 days. Table S6. Summary statistics stratified by All-cause death between 31 days and 1 year. Table S7. Summary statistics stratified by All-cause readmission between 31 days and 1 year. Fig. S1. Comparison of imputed values for Ethnicity, How-many-smoked, Time-to-first-cigarette, Borough, IMD decile, and Primary diagnosis. Table S8. Source data for regression, stratified by Hospital, outcome = Accepted intervention on first TDS assessment (N=2049). Table S9. Source data for regression, stratified by Hospital, outcome = Smoking status (Non-smoker) at 180 days post-discharge (N=1957). Table S10. Source data for regression, stratified by Hospital, outcome = Death by any cause 31 days to 1 year post-discharge (N=1770). Table S11. Source data for regression, stratified by Hospital, outcome = Readmission 31 days to 1-year post-discharge (N=1534). Table S12. Regression estimates for outcome Smoking status (non-smoker) at 30 days. Table S13. Regression estimates for outcome Smoking status (non-smoker) at 90 days. Fig. S2. Plot comparing estimates from primary and sensitivity regression models for outcome Accepted intervention at first TDS assessment. Fig. S3. Plot comparing estimates from primary and sensitivity regression models for outcome Smoking status (non-smoker) at 30 days. Fig. S4. Plot comparing estimates from primary and sensitivity regression models for outcome Smoking status (non-smoker) at 90 days. Fig. S5. Plot comparing estimates from primary and sensitivity regression models for outcome Smoking status (non-smoker) at 180 days. Fig. S6. Plot comparing estimates from primary and sensitivity regression models for outcome All-cause death between 31 days and 1-year. Fig. S7. Plot comparing estimates from primary and sensitivity regression models for outcome All-cause readmission between 31 days and 1-year.
Additional file 1 of LncRNA WFDC21P interacts with SEC63 to promote gastric cancer malignant behaviors by regulating calcium homeostasis signaling pathway
Creators: name: Dong, Jinyao
name: Lv, Yongqiang
name: Meng, Debin
name: Shi, Ruyi
name: Li, Feng
name: Guo, Rui
name: Wang, Yi
name: Guo, Jiansheng
name: Zhang, Yanyan
Publisher: name: figshare
Year: 2024
Subjects: Biophysics
Biochemistry
Medicine
Molecular Biology
Chemical Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Cancer

description: Supplementary Material 1
Geothermal exploitation in the inverted part of the Lower Saxony Basin: A case study from the Minden area
Creators: name: Knaub, Olga
name: Jüstel, Alexander Magnus
name: Bussmann, Gregor
name: Wellmann, Jan Florian
name: Kukla, Peter
Publisher: name: RWTH Aachen University
Year: 2022

description: Abstracts & presentations / EGU General Assembly 2022 EGU General Assembly 2022, EGU22, Vienna, Austria, 23 May 2022 - 27 May 2022; Göttingen : Copernicus Gesellschaft mbH EGU22-12492 (2022). doi:10.5194/egusphere-egu22-12492
description: Published by Copernicus Gesellschaft mbH, Göttingen
Relationship over southern China between the summer rainfall induced by tropical cyclones and that by monsoon
Creators: name: Jie-Peng CHEN
name: WEN, Zhi-Ping
name: WANG, Xin
Publisher: name: Taylor & Francis
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Evolutionary Biology
subject: Ecology
subject: 20199 Astronomical and Space Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: This study investigates the relationship between tropical cyclone–induced precipitation (P TC) and summer monsoon–induced precipitation (P SM) in southern China (SC) during June–August. The spatial patterns of the first interannual mode are uniform in sign over SC, with positive anomalies for P TC and negative anomalies for P SM. The background of an increase in cyclonic vorticity, an increase in RH, and a decrease in vertical wind shear over the South China Sea (SCS)–western north Pacific (WNP) provides favorable conditions for more TC genesis. The positive equatorial central Pacific SST anomaly and negative North Indian Ocean SST anomaly contribute to the anomalous cyclone over the SCS–WNP, which causes decreasing P SM in SC together with an anomalous anticyclone over eastern China–Japan. By contrast, whilst the spatial patterns of the first interdecadal mode are also uniform in sign over SC, there are positive anomalies for both P TC and P SM. The first interdecadal principal component features significant positive correlation with the number of TCs forming in the SCS. There is a significant increase in P TC and P SM after early 1990s. A positive tropical Indian Ocean (TIO) SST anomaly persists from the preceding winter to summer. During the preceding winter and spring after the early 1990s, a positive western Pacific SST anomaly can result in TIO SST warming through vertical circulation. Then, the positive TIO SST anomaly triggers an anomalous WNP anticyclone and contributes to the interdecadal increase in SC P SM in the succeeding summer. The persistent heating source over SC from May to summer related to an earlier onset of the SCS monsoon may strengthen the East Asian subtropical summer monsoon.
Additional file 1 of A novel large intragenic DPYD deletion causing dihydropyrimidine dehydrogenase deficiency: a case report
Creators: name: Malekkou, Anna
name: Tomazou, Marios
name: Mavrikiou, Gavriella
name: Dionysiou, Maria
name: Georgiou, Theodoros
name: Papaevripidou, Ioannis
name: Alexandrou, Angelos
name: Sismani, Carolina
name: Drousiotou, Anthi
name: Grafakou, Olga
name: Petrou, Petros P.
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Supplementary Materials 1.
Top 10 research priorities in colorectal cancer : results from the colorectal cancer priority-setting partnership
Creators: name: Klotz, Rosa
name: Holze, Magdalena
name: Dörr-Harim, Colette
name: Grohmann, Erich
name: Nied, Barbara
name: Lebert, Burkhard
name: Weg-Remers, Susanne
name: Lutz, Claudia
name: Meißler, Karin
name: Schloss, Patrick
name: Ullrich, Charlotte
name: Frankenhauser, Susanne
name: Lutter, Heidi
name: Bühler, Diedrich
name: Ahmed, Azaz
name: Gronlund, Toto
name: Mihaljevic, André L.
Publisher: name: Universität Ulm
Year: 2022
Subjects: subject: Priority-Setting Partnership
subject: Forschungspartnerschaft
subject: DDC 610 / Medicine & health
subject: Colorectal neoplasms
subject: Research
subject: Patient participation
subject: Dickdarmkrebs
subject: Forschung

description: Background Colorectal cancer (CRC) is the third most frequent cause of cancer death in the word. Which aspects of research into CRC should be accorded the highest priority remains unclear, because relevant stakeholders, such as patients, nurses, and physicians, played hardly any part in the development of research projects. The goal in forming the CRC Priority-Setting Partnership (PSP) was to bring all relevant stakeholders together to identify and prioritize unresolved research questions regarding the diagnosis, treatment, and follow-up of CRC. Methods The CRC PSP worked in cooperation with the British James Lind Alliance. An initial nationwide survey was conducted, and evidence uncertainties were collected, categorized, summarized, and compared with available evidence from the literature. The as-yet unresolved questions were (provisionally) ranked in a second national wide survey, and at a concluding consensus workshop all stakeholders came together to finalize the rankings in a nominal group process and compile a top 10 list. Results In the first survey (34% patients, 51% healthcare professionals, 15% unknown), 1102 submissions were made. After exclusion of duplicates and previously resolved questions, 66 topics were then ranked in the second survey (56% patients, 39% healthcare professionals, 5% unknown). This interim ranking process revealed distinct differences between relatives and healthcare professionals. The final top 10 list compiled at the consensus workshop covers a wide area of research topics. Conclusion All relevant stakeholders in the CRC PSP worked together to identify and prioritize the top 10 evidence uncertainties. The results give researchers and funding bodies the opportunity to address the most patient-relevant research projects. It is the first detailed description of a PSP in Germany, and the first PSP on CRC care worldwide.
Characterizing fracture networks and petrophysical bulk properties of carbonates from the margin of the Münsterland Cretaceous Basin, NW Germany, from outcrops, virtual outcrop models and laboratory testing
Creators: name: Slama, Samuel
name: Jüstel, Alexander Magnus
name: Lippert, Kevin
name: Kukla, Peter
Publisher: name: RWTH Aachen University
Year: 2022

description: Abstracts & presentations / EGU General Assembly 2022 EGU General Assembly 2022, EGU22, Vienna, Austria, 23 May 2022 - 27 May 2022; Göttingen : Copernicus Gesellschaft mbH EGU22-2503, 2 Seiten (2022). doi:10.5194/egusphere-egu22-2503
description: Published by Copernicus Gesellschaft mbH, Göttingen
title: OFROM: interview avec unine15a78m
Creators: name: Delafontaine, François
name: Rothenbühler, Julie
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2023
Subjects: subject: Français
subject: fra

description: Conforms to: Praat textgrid
description: Conforms to: doi:10.34847/cocoon.69c4fa74-f324-3ddb-9f1a-580867fd5826
description: Conforms to: doi:10.34847/cocoon.69c4fa74-f324-3ddb-9f1a-580867fd5826
description: Source: https://nakala.fr/10.34847/nkl.a7828h25.v2#eef3a0ca9f2f7334dfe3dc0cbd006b3983811407
Stress induced TDP-43 mobility loss independent of stress granules
Creators: name: Streit, Lisa
name: Kuhn, Timo
name: Vomhof, Thomas
name: Bopp, Verena
name: Ludolph, Albert C.
name: Weishaupt, Jochen H.
name: Gebhardt, J. Christof M.
name: Michaelis, Jens
name: Danzer, Karin M.
Publisher: name: Universität Ulm
Year: 2022
Subjects: subject: Biological physics
subject: Single-molecule biophysics
subject: PHASE-TRANSITION
subject: LOCALIZATION
subject: REVEALS
subject: FTLD
subject: DDC 570 / Life sciences
subject: Amyotrophic lateral sclerosis
subject: Biophysics
subject: Intrinsically disordered proteins
subject: Phase transition phenomena
subject: Arsenic Toxicology
subject: Mutations
subject: Tracking (Psychology)
subject: Frontotemporal Lobar Degeneration
subject: RNA-Binding Proteins
subject: Myatrophische Lateralsklerose
subject: RNS-Bindungsproteine
subject: Lokalisation
subject: Aggregation

description: TAR DNA binding protein 43 (TDP-43) is closely related to the pathogenesis of amyotrophic lateral sclerosis (ALS) and translocates to stress granules (SGs). The role of SGs as aggregation-promoting “crucibles” for TDP-43, however, is still under debate. We analyzed TDP-43 mobility and localization under different stress and recovery conditions using live cell single-molecule tracking and super-resolution microscopy. Besides reduced mobility within SGs, a stress induced decrease of TDP-43 mobility in the cytoplasm and the nucleus was observed. Stress removal led to a recovery of TDP-43 mobility, which strongly depended on the stress duration. ‘Stimulated-emission depletion microscopy’ (STED) and ‘tracking and localization microscopy’ (TALM) revealed not only TDP-43 substructures within stress granules but also numerous patches of slow TDP-43 species throughout the cytoplasm. This work provides insights into the aggregation of TDP-43 in living cells and provide evidence suggesting that TDP-43 oligomerization and aggregation takes place in the cytoplasm separate from SGs.
Chehadeh, Alexius: Al-Turabi zwischen Nachahmung (taqlīd) und Erneuerung (taǧdīd). Sein Verständnis von Islam, islamischem Staat, Menschenrechten und Dschihad
Creators: name: Seidensticker, Tilmann
Publisher: name: Theologische Revue
Year: 2020

description: Theologische Revue, Bd. 116 (2020): März
Supplementary table and figure from Neuroendocrine correlates of sex-role reversal in barred buttonquails
Creators: name: Voigt, Cornelia
Publisher: name: The Royal Society
Year: 2016
Subjects: subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: 60801 Animal Behaviour

description: Primer sequences and photomicrograph of steroid hormone receptor and aromatase expression in hatchling buttonquails
UNESCO Call to Action: Closing the gender gap in science
Creators: name: UNESCO
Publisher: name: UNESCO
Year: 2024

description: This Call to Action is addressed to the global community: to policy-makers and decision-makers at the level of governments, universities, research and educational institutions, funding organizations, philanthropic organizations and the private sector.

It is a call to ensure that girls are never discouraged from pursuing their aspirations to become scientists and to convey to them that such goals are indeed attainable. It is also a call to dismantle the barriers that hinder women from realizing their full potential in science, in order to break the glass ceiling that prevents them from attaining leadership positions in scientific systems across the world.
Additional file 1 of Adjuvant chemotherapy and survival in males aged 70 years or older with breast cancer: a population-based retrospective study
Creators: name: Yu, Yushuai
name: Huang, Kaiyan
name: Liu, Yushan
name: Chen, Ruiliang
name: Yu, Xin
name: Song, Chuangui
Publisher: name: figshare
Year: 2024
Subjects: Pharmacology
Biotechnology
Biological Sciences not elsewhere classified
Cancer
Science Policy

description: Supplementary Material 1
STable 1 from Changes in composition and abundance of functional groups of Arctic fungi in response to long-term summer warming
Creators: name: Geml, József
name: Semenova, Tatiana A.
name: Morgado, Luis N.
name: Welker, Jeffrey M.
Publisher: name: The Royal Society
Year: 2016
Subjects: subject: Ecology
subject: FOS: Biological sciences

description: The OTU distribution matrix with read abundance and with % sequence similarity, pairwise alignment length, and identity of the most similar reference sequence. M = moist tundra, D = dry tundra, C = control, T = warming.
Inhibition of Cdk5 increases osteoblast differentiation and bone mass and improves fracture healing
Creators: name: Ahmad, Mubashir
name: Krüger, Benjamin Thilo
name: Kroll, Torsten
name: Vettorazzi, Sabine
name: Dorn, Ann-Kristin
name: Mengele, Florian
name: Lee, Sooyeon
name: Nandi, Sayantan
name: Yilmaz, Dilay
name: Stolz, Miriam
name: Tangudu, Naveen Kumar
name: Carro Vázquez, David
name: Pachmayr, Johanna
name: Cirstea, Ion C.
name: Spasić Vujić, Maja
name: Ploubidou, Aspasia
name: Ignatius, Anita
name: Tuckermann, Jan
Publisher: name: Universität Ulm
Year: 2021
Subjects: subject: DDC 570 / Life sciences
subject: DDC 610 / Medicine & health
subject: Bone
subject: Metabolic bone disease
subject: Knochen

description: Identification of regulators of osteoblastogenesis that can be pharmacologically targeted is a major goal in combating osteoporosis, a common disease of the elderly population. Here, unbiased kinome RNAi screening in primary murine osteoblasts identified cyclin-dependent kinase 5 (Cdk5) as a suppressor of osteoblast differentiation in both murine and human preosteoblastic cells. Cdk5 knockdown by siRNA, genetic deletion using the Cre-loxP system, or inhibition with the small molecule roscovitine enhanced osteoblastogenesis in vitro. Roscovitine treatment significantly enhanced bone mass by increasing osteoblastogenesis and improved fracture healing in mice. Mechanistically, downregulation of Cdk5 expression increased Erk phosphorylation, resulting in enhanced osteoblast-specific gene expression. Notably, simultaneous Cdk5 and Erk depletion abrogated the osteoblastogenesis conferred by Cdk5 depletion alone, suggesting that Cdk5 regulates osteoblast differentiation through MAPK pathway modulation. We conclude that Cdk5 is a potential therapeutic target to treat osteoporosis and improve fracture healing.
Additional file 1 of Early smoking lead to worse prognosis of COPD patients: a real world study
Creators: name: Wu, Jiankang
name: Meng, Weiwei
name: Ma, Yiming
name: Zhao, Zhiqi
name: Xiong, Ruoyan
name: Wang, Jiayu
name: Zhao, Rui
name: Zeng, Huihui
name: Chen, Yan
Publisher: name: figshare
Year: 2024
Subjects: Medicine
Biotechnology
Biological Sciences not elsewhere classified
Cancer
Science Policy
Mental Health
Virology

description: Supplementary Material 1
Reconfiguring dominating sets in minor-closed graph classes
Creators: name: Rautenbach, Dieter
name: Redl, Johannes
Publisher: name: Universität Ulm
Year: 2021
Subjects: subject: Dominating set
subject: Reconfiguration
subject: Toroidal graph
subject: Minor-closed graph class
subject: 05C69
subject: DDC 510 / Mathematics
subject: Closed graph theorems
subject: Rekonfiguration

description: For a graph G, two dominating sets D and D′ in G, and a non-negative integer k, the set D is said to k-transform to D′ if there is a sequence D0,…,Dℓ of dominating sets in G such that D=D0, D′=Dℓ, |Di|≤k for every i∈{0,1,…,ℓ}, and Di arises from Di−1 by adding or removing one vertex for every i∈{1,…,ℓ}. We prove that there is some positive constant c and there are toroidal graphs G of arbitrarily large order n, and two minimum dominating sets D and D′ in G such that D k-transforms to D′ only if k≥max{|D|,|D′|}+cn−−√. Conversely, for every hereditary class G that has balanced separators of order n↦nα for some α<1, we prove that there is some positive constant C such that, if G is a graph in G of order n, and D and D′ are two dominating sets in G, then D k-transforms to D′ for k=max{|D|,|D′|}+⌊Cnα⌋.
Statistical models
Creators: name: Anindya Hapsari
Publisher: name: OSF Registries
Year: 2024

description: The data extracted from the selected articles will be synthesised. A narrative summary of the findings will be organised based on the research questions and specific objectives. The results will be grouped into two categories: questionnaire-based instruments and other endometriosis predictor instruments. Subsequently, various challenges experienced in the application of these instruments will be analyzed. Any patterns, trends or gaps in the literature will be identified. Some of the data, particularly year of publication, region/institution, sample size, study design, theoretical background will be analysed using simple descriptive statistics (frequency counts). Visual presentation of data and narrative summaries will be presented in the review to provide an in-depth overview of the review findings.
Monastic remains at Ravenstonedale.
Creators: name: Turnbull, Percival
name: Walsh, Deborah
Publisher: name: Archaeology Data Service
Year: 2002

description: Transactions of the Cumberland & Westmorland Antiquarian & Archaeological Society, 92, 67-76
description: Presents a review of evidence for a medieval Gilbertine cell at this location. Three groups of buildings or rooms were observed and three phases of development are isolated. The first is supposed to relate to the late twelfth century founding of the cell, followed by late thirteenth or fourteenth century remodelling, and final, apparently piecemeal, post-Dissolution building. There is a call for further investigation of the site.
Additional file 1 of Synergistic dual cell therapy for atherosclerosis regression: ROS-responsive Bio-liposomes co-loaded with Geniposide and Emodin
Creators: name: Li, Zhenxian
name: Zhu, Haimei
name: Liu, Hao
name: Liu, Dayue
name: Liu, Jianhe
name: Zhang, Yi
name: Qin, Zhang
name: Xu, Yijia
name: Peng, Yuan
name: Ruan, Lihua
name: Li, Jintao
name: He, Yao
name: Liu, Bin
name: Long, Yun
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biological Sciences not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Supplementary Material 1
Supplemental figures (S1, S2) and tables (S1, S2). from Where in the air? Aerial habitat use of nocturnally migrating birds
Creators: name: Horton, Kyle G.
name: Doren, Benjamin M. Van
name: Stepanian, Phillip M.
name: Farnsworth, Andrew
name: Kelly, Jeffrey F.
Publisher: name: The Royal Society
Year: 2016
Subjects: subject: Ecology
subject: FOS: Biological sciences
subject: 60801 Animal Behaviour

description: Figure S1, spatial and temporal distribution of mean wind profit. Figure S2, migrants' wind profits versus maximum and minimum wind profits. Table S1, radar antenna heights. Table S2, mean differences between migrant flight height and height of wind profit quantiles.
A Roman road from Kendal to Ambleside. Part 2: Broadgate to Ambleside - a field survey.
Creators: name: Andrews, J S
Publisher: name: Archaeology Data Service
Year: 2002

description: Transactions of the Cumberland & Westmorland Antiquarian & Archaeological Society, 92, 57-66
description: Reports the second part of a survey to re-locate the Roman road running between the forts of Kendal and Ambleside. Information from visible and assumed stretches of road is consolidated with dowsing evidence. Flat paving and pebble surfaces are in evidence, along with some (possibly superseded) parallel routes, stone lined wayside springs, and a possible fort at Broadgate.
HadISDH.extremes Update Document version 1.1.0.2023f
Creators: name: Willett, Kate
Publisher: name: Zenodo
Year: 2024

description: Update notes for HadISDH.extremes.1.1.0.2023f compared to the previous version. This describes any major changes, bug fixes and minor changes, and minor bug fixes and historical updates. It includes their justification and any notable impacts. 

Note that this version has a related dataset on the CEDA archive https://catalogue.ceda.ac.uk/uuid/0a36ca390a5844578905780ed4c78ded.
The Cutting of the Turf Wall at Appletree.
Creators: name: Whitworth, Alan M
Publisher: name: Archaeology Data Service
Year: 2002

description: Transactions of the Cumberland & Westmorland Antiquarian & Archaeological Society, 92, 49-56
description: The section of turf wall at Appletree was recorded during cutting as part of the Pilgrimage of Hadrian's Wall in 1989. Previous cuttings to reveal the structure had not been recorded. This article provides section drawing and photographic evidence for the structure of the turf wall which exhibits five main components: heavily leached subsoil; original ground surface; overlapping turf blocks forming the wall core; a clay revetment; and the present-day ground surface.
Excavations on two crop-marked sites in the Solway Plain, Cumbria. Ewanrigg Settlement and Swarthy Hill 1986-1988.
Creators: name: Bewley, Robert H
Publisher: name: Archaeology Data Service
Year: 2002

description: Transactions of the Cumberland & Westmorland Antiquarian & Archaeological Society, 92, 23-48
description: Excavations were undertaken at Ewanrigg to ascertain the extent of continuity of activity in the light of the discovery of a BA cemetery and medieval kiln only metres from what had hitherto been seen as a Late RB site. Cropmarks at Swarthy Hill indicated a possible IA hillfort which was supported if not confirmed by radiocarbon dating of a charcoal sample to within the vicinity of that period. `Appendix 1' (44--6) provides lists of contexts referred to in the text from both sites. `Appendix 2' (46) gives notes on the transcription of the aerial photographs.
Further research on the prehistory of the Cumbrian Limestone Uplands: the ceramic evidence.
Creators: name: Cherry, James
name: Cherry, Peter J
Publisher: name: Archaeology Data Service
Year: 2002

description: Transactions of the Cumberland & Westmorland Antiquarian & Archaeological Society, 92, 13-22
description: An introduction to work so far undertaken is followed by `Appendix 1' (14--22) which presents a synopsis of a report by Paul T Nicholson on analysis of thin sections of prehistoric pottery from the limestone uplands of Cumbria, including sherds from ten sites in the area. There are details of inclusions and fabric types from ware groups including Grimston Ware, Grooved Ware, Peterborough Ware and miscellaneous Late Neolithic pot.
Summary of sampling survey effort; Herbivorous fish functional classification; Predictors terms, estimating anthropogenic impacts and modeling; Herbivore species richness and biomass by region; Summary of the best performing GAMMs (all models with weight > 0.05) with smoother graphs. from Natural bounds on herbivorous coral reef fishes
Creators: name: Heenan, Adel
name: Hoey, Andrew S.
name: Williams, Gareth J.
name: Williams, Ivor D.
Publisher: name: The Royal Society
Year: 2016
Subjects: subject: Ecology
subject: FOS: Biological sciences

description: Number of replicate stationary point count and towed-diver surveys per island.;Herbivorous coral reef fishes were functionally classified based on a combination of their diet, morphology of feeding apparatus, feeding behavior, and impact on benthic communities. ;Details of the human and biophysical predictor terms used and details of the generalized mixed effect modeling process.;Proportion of sightings per species in each functional group and summary results of modeling functional group biomass as a function of functional group richness.;The summary results from the generalized additive mixed effects modeling procedure showing the top candidate models (all models with weight > 0.05), variable importance estimates and jack-knife sensitivity test. The smoother terms for the highest ranked models are plotted.
Additional file 1 of A new scale to assess health-facility level management: the development and validation of the facility management scale in Ghana, Uganda, and Malawi
Creators: name: Mubiri, Paul
name: Ssengooba, Freddie
name: O’Byrne, Thomasena
name: Aryaija-Keremani, Adelaine
name: Namakula, Justine
name: Chikaphupha, Kingsley
name: Aikins, Moses
name: Martineau, Tim
name: Vallières, Frédérique
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Sociology
subject: FOS: Sociology
subject: Science Policy

description: Supplementary Material 1
Supplementary figures from Cranial shape evolution in adaptive radiations of birds: comparative morphometrics of Darwin's finches and Hawaiian honeycreepers
Creators: name: Tokita, Masayoshi
name: Yano, Wataru
name: James, Helen F.
name: Arhat Abzhanov
Publisher: name: The Royal Society
Year: 2016
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Developmental Biology

description: Figure S1. Evolutionary allometry of the skull of all species under study; Figure S2. Comparison of the results of allometry analyses of the specimens with all 23 landmarks and the specimens with minimum 15 landmarks; Figure S3. Phylomorphospace of the skull of all species under study; Figure S4. Allometry-corrected phylomorphospace of the skull of all species under study; Figure S5. A phenogram using neighbor-joining cluster analysis of whole skull morphology of 77 songbird species; Figure S6. Comparison of morphological variance between the songbird lineages under study; Figure S7. Morphological disparity of the palatine, pterygoid, and quadrate bones; Figure S8. Evolutionary allometry of the skull in Darwin's finches; Figure S9. Evolutionary allometry of the skull in Hawaiian honeycreepers.
Measured variables
Creators: name: Anindya Hapsari
Publisher: name: OSF Registries
Year: 2024

description: Variables to be included include study title, authors, year of publication, journal, region/institution, study aims/objectives, study location, study population, sample size, study design, theoretical background, data collection methods, results/findings. The chart outline will also include an assessment of data quality, study strengths, study limitations, and additional relevant information.
Additional file 1 of Association between dental age and malocclusions: a systematic review
Creators: name: Fonseca-Souza, Gabriela
name: Renostro-Souza, Amanda
name: Alves-Souza, Lhorrany
name: Junior, Geraldo Thedei
name: de Menezes-Oliveira, Maria Angélica Hueb
name: Antunes, Lívia Azeredo Alves
name: Beisel-Memmert, Svenja
name: Kirschneck, Christian
name: Feltrin-Souza, Juliana
name: Küchler, Erika Calvano
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Environmental Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Supplementary Material 1.
title: OFROM: interview avec unine15a77d
Creators: name: Delafontaine, François
name: Rothenbühler, Julie
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2023
Subjects: subject: Français
subject: fra

description: Conforms to: Praat textgrid
description: Conforms to: doi:10.34847/cocoon.69c4fa74-f324-3ddb-9f1a-580867fd5826
description: Conforms to: doi:10.34847/cocoon.69c4fa74-f324-3ddb-9f1a-580867fd5826
description: Source: https://nakala.fr/10.34847/nkl.ae6clt70.v2#28f7f2b03dd16e83b9adc5b72f188b51be190768
DMP: Dynamic City Livability Analysis
Creators: name: Burtscher, Lukas
Publisher: name: Zenodo
Year: 2024
Subjects: subject: Data science
subject: Statistical mechanics

description: Dynamic City Livability Analysis

The project delves into the analysis of livability indices to understand the dynamics of cityrankings over time and their correlations with each other and country statistics. I aimed touncover the determining characteristics of a city's livability, offering insights into what makescertain cities more desirable places to live.

Research Questions

How do city quality of life rankings change over time?

How do these rankings correlate with each other?

How do they correlate with statistics about the countries in which the cities are found?

How do they correlate with the cost of living?

What are the determining characteristics of the livability of a city?
Additional file 1 of Increased lesion detectability in patients with locally advanced breast cancer—A pilot study using dynamic whole-body [18F]FDG PET/CT
Creators: name: Pedersen, Mette Abildgaard
name: Dias, André H.
name: Hjorthaug, Karin
name: Gormsen, Lars C.
name: Fledelius, Joan
name: Johnsson, Anna Lyhne
name: Borgquist, Signe
name: Tramm, Trine
name: Munk, Ole Lajord
name: Vendelbo, Mikkel Holm
Publisher: name: figshare
Year: 2024
Subjects: Space Science
Physical Sciences not elsewhere classified
Medicine
Cell Biology
Cancer
Mental Health

description: Supplementary Material 1
How objectively measured Twitter and Instagram use relate to self‐reported personality and tendencies toward Internet/Smartphone Use Disorder
Creators: name: Peterka‐Bonetta, Jessica
name: Sindermann, Cornelia
name: Elhai, Jon D.
name: Montag, Christian
Publisher: name: Universität Ulm
Year: 2021
Subjects: subject: big five model of personality
subject: five factor model of personality
subject: Instagram
subject: Internet addiction
subject: Internet use disorder
subject: problematic Internet use
subject: problematic smartphone use
subject: smartphone addiction
subject: smartphone use disorder
subject: DDC 150 / Psychology
subject: Internet addiction
subject: Cell phones; Psychological aspects
subject: Big Five model
subject: Personality disorders
subject: Personality
subject: Social media
subject: Behavior, Addictive
subject: Internet
subject: Internet addiction disorder
subject: Fünffaktorenmodell der Persönlichkeit
subject: Social Media
subject: Online-Sucht
subject: Twitter
subject: Smartphone

description: Abstract Mounting evidence suggests meaningful relationships between personality and tendencies toward Internet Use Disorder (IUD), Smartphone Use Disorder (SmUD) and Social Networks Use Disorder (SNUD). Results of past research vary not only depending on methods applied, but also with respect to data and platforms investigated. With the present work, we aimed to examine links between objectively measured use of Twitter/Instagram and personality in a sample of N = 331 participants. We further investigated the relationship between actual social media usage and self‐reported tendencies toward IUD/SmUD. We observed that active social media usage (number of posts) was negatively correlated with IUD/SmUD levels. Other users' reactions to one's posts (Likes and comments) on the other hand were positively associated with SmUD severity. Thus, our work contradicts the sometimes prevailing view that greater activity on social media in general predicts greater SmUD. Finally, we replicated most prior findings by showing that greater Extraversion, Conscientiousness, and Agreeableness were associated with more activity on social media (e.g. more posts on Twitter). Based on our results, some types of social media use seem to be beneficial to the individual and thus do not contribute to the development or maintenance of problematic tendencies in the context of social media applications.
Hypotheses
Creators: name: Anindya Hapsari
Publisher: name: OSF Registries
Year: 2024

description: This review will systematically map the research that has been conducted to discover screening instruments for endometriosis. This review will synthesize the findings from these studies into two categories: questionnaire-based instruments and other endometriosis predictor instruments. Subsequently, various challenges experienced in the application of these instruments will be analyzed.