cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
MOESM5 of Asp305Gly mutation improved the activity and stability of the styrene monooxygenase for efficient epoxide production in Pseudomonas putida KT2440
Creators: name: Tan, Chunlin
name: Zhang, Xian
name: Zhu, Zhijing
name: Xu, Meijuan
name: Yang, Taowei
name: Osire, Tolbert
name: Yang, Shangtian
name: Rao, Zhiming
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Additional file 5: Figure S1. A section of a multiple-sequence alignment of styA with oxygenases from diverse proteins.
Strong contraction, the mirabolic group and the Kirillov conjecture
Creators: name: Subag, Eyal M.
name: Baruch, Ehud Moshe
Publisher: name: arXiv
Year: 2018
Subjects: subject: Mathematical Physics (math-ph)
subject: Representation Theory (math.RT)
subject: FOS: Physical sciences
subject: FOS: Mathematics
subject: 22E70

description: We lift any (infinitesimal) unitary irreducible representation of $GL_n(\mathbb{R})$ to a family of representations that strongly contracts to a certain type of (infinitesimal) unitary irreducible representations of $\mathbb{R}^n\rtimes {M}_n$, with $M_n$ being the mirabolic subgroup of $GL_n(\mathbb{R})$. For the case of $n=2$ we obtain the full unitary dual of $\mathbb{R}^2\rtimes {M}_2$ as a strong contraction. We demonstrate the role of the Kirillov conjecture and Kirillov model for these contractions.
description: 9 pages
Intrinsic statistical separation of subpopulations in heterogeneous collective motion via dimensionality reduction
Creators: name: Tan, Pei
name: Miles, Christopher E
Publisher: name: arXiv
Year: 2023
Subjects: subject: Quantitative Methods (q-bio.QM)
subject: Adaptation and Self-Organizing Systems (nlin.AO)
subject: Biological Physics (physics.bio-ph)
subject: FOS: Biological sciences
subject: FOS: Physical sciences

description: Collective motion of locally interacting agents is found ubiquitously throughout nature. The inability to probe individuals has driven longstanding interest in the development of methods for inferring the underlying interactions. In the context of heterogeneous collectives, where the population consists of individuals driven by different interactions, existing approaches require some knowledge about the heterogeneities or underlying interactions. Here, we investigate the feasibility of identifying the identities in a heterogeneous collective without such prior knowledge. We numerically explore the behavior of a heterogeneous Vicsek model and find sufficiently long trajectories intrinsically cluster in a PCA-based dimensionally reduced model-agnostic description of the data. We identify how heterogeneities in each parameter in the model (interaction radius, noise, population proportions) dictate this clustering. Finally, we show the generality of this phenomenon by finding similar behavior in a heterogeneous D'Orsogna model. Altogether, our results establish and quantify the intrinsic model-agnostic statistical disentanglement of identities in heterogeneous collectives.
description: 9 pages, 7 figures; v2: based on a great reviewer's suggestion, all numerical experiments to start after equilibration and figures updated accordingly
The effect of barium-promoted for microsphere Ru/CeO2 catalysts in ammonia synthesis
Creators: name: Liu, Pengcheng
name: Niu, Ruyue
name: Li, Wei
name: Wang, Shuang
name: Li, Jinping
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Biophysics
subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Chemical Sciences not elsewhere classified
subject: Science Policy
subject: Developmental Biology

description: In this essay, the effect of the morphology of the CeO2 support and the Ba promoter on the ammonia synthesis reaction was studied. CeO2 support with {110} and {100} crystal planes and more oxygen vacancies enhanced the catalytic activity of ammonia synthesis. The relatively uniform microspheres structure CeO2 support (CeO2-MS) with {110} and {100} crystal planes was synthesized. The structural functions of the as-synthesized CeO2 support for the Ru-based catalyst were investigated in the ammonia synthesis reaction. The results of catalytic performance showed that the catalytic activity of 2.5%Ru/CeO2-MS catalyst reached 8940 μmol· g−1· h−1 at 450 ℃, 3.8 MPa, H2/N2 = 3 (60 mL∙min−1), which is higher nearly 2.5 times than the 2.5%Ru/CeO2-commercial (CeO2-C). And the catalytic activity of catalysts increased with the increase of reaction temperature. The activity of 6º-2.5%Ru/CeO2-MS (24000 μmol· g−1· h−1) catalyst increased about 268% than that of catalyst without addition of Ba. Their physical and chemical properties were characterized by XRD, BET, HRTEM, H2-TPR, H2-TPD, and XPS analyses. Our results indicate that the 2.5%Ru/CeO2-MS catalyst and catalysts involving promoters (Cs, K, and Ba) exhibit significant support-morphology-dependent catalytic activity for ammonia synthesis.
Entropy-vanishing transition and glassy dynamics in frustrated spins
Creators: name: Yin, Hui
name: Chakraborty, Bulbul
Publisher: name: arXiv
Year: 2000
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: In an effort to understand the glass transition, the dynamics of a non-randomly frustrated spin model has been analyzed. The phenomenology of the spin model is similar to that of a supercooled liquid undergoing the glass transition. The slow dynamics can be associated with the presence of extended string-like structures which demarcate regions of fast spin flips. An entropy-vanishing transition, with the string density as the order parameter, is related to the observed glass transition in the spin model.
description: 4 pages,5 figures, accepted in PRL January 2001
Slowly rotating ultracompact Schwarzschild star in the gravastar limit
Creators: name: Beltracchi, Philip
name: Posada, Camilo
Publisher: name: arXiv
Year: 2023
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We reconsider the problem of a slowly rotating homogeneous star, or Schwarzschild star, when its compactness goes beyond the Buchdahl bound and approaches the gravastar limit $R\to 2M$. We compute surface and integral properties of such configuration by integrating the Hartle-Thorne structure equations for slowly rotating relativistic masses, at second order in angular velocity. In the gravastar limit, we show that the metric of a slowly rotating Schwarzschild star agrees with the Kerr metric, thus, within this approximation, it is not possible to tell a gravastar from a Kerr black hole by any observations from the spacetime exterior to the horizon.
description: Matches the published version in CQG
title: Ambulatory care-sensitive emergency department cases: a mixed methods approach to systemise and analyse cases in Germany
Creators: name: Schüttig, Wiebke
name: Sundmacher, Leonie
Publisher: name: German Medical Science GMS Publishing House
Year: 2019
Subjects: subject: 610 Medical sciences; Medicine

description: Background: Internationally, emergency departments (ED) are treating increasing numbers of patients with conditions that could have been managed appropriately in ambulatory care (AC) settings. The aim of our study was to develop the first consensus-based list of AC-sensitive conditions commonly seen[for full text, please go to the a.m. URL]
description: 18. Deutscher Kongress für Versorgungsforschung (DKVF)
Additional file 1 of Distinct associations of NEDD4L expression with genetic abnormalities and prognosis in acute myeloid leukemia
Creators: name: Chu, Ming-qiang
name: Zhang, Liu-chao
name: Yuan, Qian
name: Zhang, Ting-juan
name: Zhou, Jing-dong
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Cancer
subject: Hematology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Additional file 1: Table S1. Clinic-pathologic characteristics of AML in our research cohort.
Nucleon and $Δ$ isobar in a strong magnetic field
Creators: name: Yakhshiev, Ulugbek
name: Kim, Hyun-Chul
name: Oka, Makoto
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Experiment (hep-ex)
subject: Nuclear Experiment (nucl-ex)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We investigate the static properties of the nucleon in the presence of strong magnetic fields and discuss the consequent changes of the nucleon structure, based on the Skyrme model. The results show that at large values of the magnetic field ($\sim10^{17}$ to $10^{18} \mathrm{G}$), which is supposed to appear in heavy-ion collision experiments at RHIC energies, the soliton starts to deviate from the spherically symmetric form and its size starts to change. At extremely large values of the magnetic field ($\sim 10^{19}$ G), which may be found at the LHC experiments, the soliton becomes more compact than in free space. The results also show that in the presence of the external magnetic field, the mass of the nucleon tends to increase in general and the mass degeneracy of the $Δ$ isobars from isospin symmetry will be lifted. We also discuss the changes in the mass difference between the $Δ$ and the nucleon, $Δm_{Δ\mathrm{N}}$, due to the influence of the external magnetic field. We find that $Δm_{Δ\mathrm{N}}$ increases as the strength of the magnetic field grows.
description: 11 pages, 5 figures. Typos were removed and more discussions were included
Inertia of Casimir energy
Creators: name: Jaekel, Marc-Thierry
name: Reynaud, Serge
Publisher: name: arXiv
Year: 2001
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Moving mirrors are submitted to reaction forces by vacuum fields. The motional force is known to vanish for a single mirror uniformly accelerating in vacuum. We show that inertial forces (proportional to accelerations) arise in the presence of a second scatterer, exhibiting properties expected for a relative inertia: the mass corrections depend upon the distance between the mirrors, and each mirror experiences a force proportional to the acceleration of the other one. When the two mirrors move with the same acceleration, the mass correction obtained for the cavity represents the contribution to inertia of Casimir energy. Accounting for the fact that the cavity moves as a stressed rigid body, it turns out that this contribution fits Einstein's law of inertia of energy.
description: 10 pages
MOESM4 of Both candidate gene and neutral genetic diversity correlate with parasite resistance in female Mediterranean mouflon
Creators: name: Portanier, Elodie
name: Garel, Mathieu
name: SĂŠbastien Devillard
name: Maillard, Daniel
name: Poissant, Jocelyn
name: Galan, Maxime
name: Slimania Benabed
name: Marie-ThĂŠrĂ¨Se Poirel
name: Duhayer, Jeanne
name: Itty, Christian
name: Bourgoin, Gilles
Publisher: name: figshare
Year: 2019
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified

description: Additional file 4. R code used for statistical analyses.
Violations of local realism with quNits up to N=16
Creators: name: Durt, Thomas
name: Kaszlikowski, Dagomir
name: Zukowski, Marek
Publisher: name: arXiv
Year: 2001
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Predictions for systems in entangled states cannot be described in local realistic terms. However, after admixing some noise such a description is possible. We show that for two quNits (quantum systems described by N dimensional Hilbert spaces) in a maximally entangled state the minimal admixture of noise increases monotonically with N. The results are a direct extension of those of Kaszlikowski et. al., Phys. Rev. Lett. {\bf 85}, 4418 (2000), where results for $N\leq 9$ were presented. The extension up to N=16 is possible when one defines for each N a specially chosen set of observables. We also present results concerning the critical detectors efficiency beyond which a valid test of local realism for entangled quNits is possible.
description: 5 pages, 3 ps pictures
Weakened Topological Protection of the Quantum Hall Effect in a Cavity
Creators: name: Rokaj, Vasil
name: Wang, Jie
name: Sous, John
name: Penz, Markus
name: Ruggenthaler, Michael
name: Rubio, Angel
Publisher: name: arXiv
Year: 2023
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We study the quantum Hall effect in a two-dimensional homogeneous electron gas coupled to a quantum cavity field. As initially pointed out by Kohn, Galilean invariance for a homogeneous quantum Hall system implies that the electronic center of mass (CM) decouples from the electron-electron interaction, and the energy of the CM mode, also known as Kohn mode, is equal to the single particle cyclotron transition. In this work, we point out that strong light-matter hybridization between the Kohn mode and the cavity photons gives rise to collective hybrid modes between the Landau levels and the photons. We provide the exact solution for the collective Landau polaritons and we demonstrate the weakening of topological protection at zero temperature due to the existence of the lower polariton mode which is softer than the Kohn mode. This provides an intrinsic mechanism for the recently observed topological breakdown of the quantum Hall effect in a cavity [Appugliese et al., Science 375, 1030-1034 (2022)]. Importantly, our theory predicts the cavity suppression of the thermal activation gap in the quantum Hall transport. Our work paves the way for future developments in the cavity control of quantum materials.
description: We updated the title of the manuscript to agree with the published version
Chimeras in digital phase-locked loops
Creators: name: Paul, Bishwajit
name: Banerjee, Tanmoy
Publisher: name: arXiv
Year: 2018
Subjects: subject: Adaptation and Self-Organizing Systems (nlin.AO)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Chaotic Dynamics (nlin.CD)
subject: FOS: Physical sciences

description: Digital phase-locked loops (DPLLs) are nonlinear feedback-controlled systems that are widely used in electronic communication and signal processing applications. In most of the applications they work in coupled mode, however, vast of the studies on DPLLs concentrate on the dynamics of a single isolated unit. In this paper we consider both one- and two-dimensional networks of DPLLs connected through a practically realistic nonlocal coupling and explore their collective dynamics. For the one-dimensional network we analytically derive the parametric zone of stable phase-locked state in which DPLLs essentially work in their normal mode of operation. We demonstrate that apart from the stable phase-locked state, a variety of spatiotemporal structures including chimeras arise in a broad parameter zone. For the two-dimensional network under nonlocal coupling we identify several variants of chimera patterns, such as strip and spot chimeras. We identify and characterize the chimera patterns through suitable measures like local curvature and correlation function. Our study reveals the existence of chimeras in a widely used engineering system, therefore, we believe that these chimera patterns can be observed in experiments as well.
description: Final Submitted Version
Additional file 11 of Transcriptome analysis of peripheral whole blood identifies crucial lncRNAs implicated in childhood asthma
Creators: name: Zheng, Peiyan
name: Huang, Chen
name: Leng, Dongliang
name: Sun, Baoqing
name: Zhang, Xiaohua Douglas
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 11: Figure S7. QRT-PCR validation for three selected key lnRNAs or mRNAs. P value was calculated by paired T-test.
DISPOSITIVO INTERATIVO PARA ALFABETIZAÇÃO DE CRIANÇAS COM DEFICIÊNCIA VISUAL
Creators: name: Higawa, Daniela Lie
name: Goes, Bruno Augusto Machado
name: Silva, Marcela Malaquias
name: Lima, Viviane Da Conceição
Publisher: name: Zenodo
Year: 2019
Subjects: Braille, visual impairment, assistive technology, literacy

description: This paper describes the development of a low-cost product to support braille literacy, for people with or without visual impairment, as children with normal vision can also learn Braille language with this interactive book. The purpose of the tool is to make learning more fun and interesting. The inclusion of a vissually impaired person must go beyond the insertion of this student, so the device must have shape an adequated size and shape for transportation, encouraging the user to use it everywhere he wishes. The SHERPA method was used as a tool to evaluate the usability and identify possible errors. Using this device, children will be able to learn concepts as Braille cells and logic, letter formation and relate vowels with sounds.
The XX-model with boundaries. Part III:Magnetization profiles and boundary bound states
Creators: name: Bilstein, Ulrich
Publisher: name: arXiv
Year: 2000
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We calculate the magnetization profiles of the $σ_j^x$ and $σ_j^z$ operators for the XX-model with hermitian boundary terms. We study the profiles on the finite chain and in the continuum limit. The results are discussed in the context of conformal invariance. We also discuss boundary excitations and their effect on the magnetization profiles.
description: 30 pages, 3 figures
Strong coupling constant from moments of quarkonium correlators
Creators: name: Petreczky, Peter
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: I review the determination of the strong coupling constant from moments of quarkonium correlators calculated on the lattice. I discuss different sources of systematic errors in such calculations.
description: Plenary talk at XIII Conference on Quark Confinement and Hadron Spectrum (Confinement 2018), July 31-August 6, 2018, Maynooth, Ireland, 8 pages, LaTeX, uses PoS style, added references
How Macroscopic Limits on Neutron Star Baryon Loss Yield Microscopic Limits on Non-Standard-Model Baryon Decay
Creators: name: Berryman, Jeffrey M.
name: Gardner, Susan
name: Zakeri, Mohammadreza
Publisher: name: arXiv
Year: 2023
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We investigate how our baryon-loss limits from anomalous binary-pulsar period lengthening can be interpreted microscopically to yield specific constraints on the particle physics of baryon number violation within a neutron star. We focus on the possibility of anomalous baryon disappearance via dark baryon processes and on scenarios in which the produced dark-sector particles do not survive to influence the response of the star to baryon-number-violating effects. We flesh out the conditions for which this may occur, as well as other key assumptions. We then turn to the analysis of particle processes in the dense nuclear medium found at the core of a neutron star, employing the techniques of relativistic mean-field theory. Using our study of in-medium effects and limits on macroscopic baryon number violation we extract limits on in-vacuum baryon-number-violating processes, and we determine them for various equations of state. We conclude by noting the implications of our results for models of dark-sector-enabled baryogenesis.
description: Published version, 87 pages, 18 figures
Supporting Information from Postbuckling analyses of frame mesostructures consisting of straight ribbons for mechanically guided three-dimensional assembly
Creators: name: Liu, Yuan
name: Xu, Zheng
name: Hwang, Keh-Chi
name: Huang, Yonggang
name: Zhang, Yihui
Publisher: name: The Royal Society
Year: 2019

description: This file includes: 1) Supplementary Note 1: Continuity conditions of frame mesostructures; 2) Supplementary Figures S1-S4;
Reply to Comment on "Triviality of the Ground State Structure in Ising Spin Glasses"
Creators: name: Palassini, Matteo
name: Young, A. P.
Publisher: name: arXiv
Year: 2000
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: We reply to the comment of Marinari and Parisi [cond-mat/0002457 v2] on our paper [Phys. Rev. Lett. 83, 5126 (1999) and cond-mat/9906323]. We show that the data in the comment are affected by strong finite-size corrections. Therefore the original conclusion of our paper still stands.
description: Reply to comment cond-mat/0002457 on cond-mat/9906323. Final version with minor changes
Synthesizing Permissive Winning Strategy Templates for Parity Games
Creators: name: Anand, Ashwani
name: Nayak, Satya Prakash
name: Schmuck, Anne-Kathrin
Publisher: name: arXiv
Year: 2023
Subjects: subject: Computer Science and Game Theory (cs.GT)
subject: FOS: Computer and information sciences

description: We present a novel method to compute \emph{permissive winning strategies} in two-player games over finite graphs with $ ω$-regular winning conditions. Given a game graph $G$ and a parity winning condition $Φ$, we compute a \emph{winning strategy template} $Ψ$ that collects an infinite number of winning strategies for objective $Φ$ in a concise data structure. We use this new representation of sets of winning strategies to tackle two problems arising from applications of two-player games in the context of cyber-physical system design -- (i) \emph{incremental synthesis}, i.e., adapting strategies to newly arriving, \emph{additional} $ω$-regular objectives $Φ'$, and (ii) \emph{fault-tolerant control}, i.e., adapting strategies to the occasional or persistent unavailability of actuators. The main features of our strategy templates -- which we utilize for solving these challenges -- are their easy computability, adaptability, and compositionality. For \emph{incremental synthesis}, we empirically show on a large set of benchmarks that our technique vastly outperforms existing approaches if the number of added specifications increases. While our method is not complete, our prototype implementation returns the full winning region in all 1400 benchmark instances, i.e., handling a large problem class efficiently in practice.
description: CAV'23
Simulation of the electromagnetic wall response during Vertical Displacement Events (VDE) in ITER tokamak
Creators: name: Atanasiu, Cǎlin V.
name: Zakharov, Leonid E.
name: Lackner, Karl
name: Hoelzl, Matthias
Publisher: name: arXiv
Year: 2018
Subjects: subject: Plasma Physics (physics.plasm-ph)
subject: FOS: Physical sciences

description: The key basis for tokamak plasma disruption modeling is to understand how currents flow to the plasma facing surfaces during plasma disruption events. In ITER tokamak, the occurrence of a limited number of major disruptions will definitively damage the chamber with no possibility to restore the device. In the current exchange plasma-wall-plasma, according to the Helmholtz decomposition theorem, our surface current density in the conducting shell - the unknown of our problem - being a vector field twice continuously differentiable in 3D, has been splited into two components: an irrotational (curl-free) vector field and a solenoidal (divergence-free) vector field. Developing a weak formulation form and minimizing the correspondent energy functionals in a Finite Element approach, we have obtained the space and time distribution of the surface currents. We verified successfully our numerical simulation with an analytical solution with pure homogeneous Neumann B.C. and satisfying the necessary existence condition. By considering the iron core presence in JET tokamak, we have split the magnetization currents - the unknowns in some integral equations - into two components, the first producing a magnetic field in the iron region only and the second producing a magnetic field in the vacuum, obtaining thus a better evaluation of the influence of the iron core on the plasma equilibrium. To reduce the influence of the singularities appearing during the surface currents determination in multiply connected domains (L-shaped domains) we have used a conformal transformation method.
description: 9 pages, 7 figures, 7$^{th}$ Int'l Conference on Mathematical Modeling in Physical Sciences, Moscow, Russia
MOESM3 of Both candidate gene and neutral genetic diversity correlate with parasite resistance in female Mediterranean mouflon
Creators: name: Portanier, Elodie
name: Garel, Mathieu
name: Devillard, Sébastien
name: Maillard, Daniel
name: Poissant, Jocelyn
name: Galan, Maxime
name: Slimania Benabed
name: Marie-Thérèse Poirel
name: Duhayer, Jeanne
name: Itty, Christian
name: Bourgoin, Gilles
Publisher: name: figshare
Year: 2019
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Computational Biology

description: Additional file 3. Variance Inflation Factors values for genetic models and tests of the presence of sMLH quadratic effects on FOC and FEC.
Relativistic precession of quantum elliptical states in the Coulomb potential
Creators: name: Crawford, Michael G. A.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: A special relativistic perturbation to non-relativistic quantum mechanics is shown to lead to the special relativistic prediction for the rate of precession for quantum states in the Coulomb potential. This behavior is shown using SO(4) coherent states as examples. These states are localized on Kepler ellipses and precess in the presence of a relativistic perturbation.
description: 10 pages, 3 figures, submitted to Am.J.Phys, revised for style, improved figures
Connecting the Dots: What Graph-Based Text Representations Work Best for Text Classification Using Graph Neural Networks?
Creators: name: Bugueño, Margarita
name: de Melo, Gerard
Publisher: name: arXiv
Year: 2023
Subjects: subject: Computation and Language (cs.CL)
subject: FOS: Computer and information sciences

description: Given the success of Graph Neural Networks (GNNs) for structure-aware machine learning, many studies have explored their use for text classification, but mostly in specific domains with limited data characteristics. Moreover, some strategies prior to GNNs relied on graph mining and classical machine learning, making it difficult to assess their effectiveness in modern settings. This work extensively investigates graph representation methods for text classification, identifying practical implications and open challenges. We compare different graph construction schemes using a variety of GNN architectures and setups across five datasets, encompassing short and long documents as well as unbalanced scenarios in diverse domains. Two Transformer-based large language models are also included to complement the study. The results show that i) although the effectiveness of graphs depends on the textual input features and domain, simple graph constructions perform better the longer the documents are, ii) graph representations are especially beneficial for longer documents, outperforming Transformer-based models, iii) graph methods are particularly efficient at solving the task.
description: Accepted to Findings of the Association for Computational Linguistics: EMNLP 2023 (Long Paper). 17 pages, 2 figures, 15 tables. The Appendix starts on page 12
Proteomic and metagenomic insights into prehistoric Spanish Levantine Rock Art
Creators: name: Roldán, Clodoaldo
name: Murcia-Mascarós, Sonia
name: López-Montalvo, Esther
name: Vilanova, Cristina
name: Porcar, Manuel
Publisher: name: arXiv
Year: 2019
Subjects: subject: Genomics (q-bio.GN)
subject: FOS: Biological sciences

description: The Iberian Mediterranean Basin is home to one of the largest groups of prehistoric rock art sites in Europe. Despite the cultural relevance of prehistoric Spanish Levantine rock art, pigment composition remains partially unknown, and the nature of the binders used for painting has yet to be disclosed. In this work, we present the first omic analysis applied to one of the flagship Levantine rock art sites: the Valltorta ravine (Castell{ó}n, Spain). We used high-throughput sequencing to provide the first description of the bacterial communities colonizing the rock art patina, which proved to be dominated by Firmicutes species and might have a protective effect on the paintings. Proteomic analysis was also performed on rock art microsamples in order to determine the organic binders present in Levantine prehistoric rock art pigments. This information could shed light on the controversial dating of this UNESCO Cultural Heritage, and contribute to defining the chrono-cultural framework of the societies responsible for these paintings.
Slow Logarithmic Decay of Magnetization in the Zero Temperature Dynamics of an Ising Spin Chain: Analogy to Granular Compaction
Creators: name: Majumdar, Satya N.
name: Dean, David S.
name: Grassberger, Peter
Publisher: name: arXiv
Year: 2000
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We study the zero temperature coarsening dynamics in an Ising chain in presence of a dynamically induced field that favors locally the `-' phase compared to the `+' phase. At late times, while the `+' domains still coarsen as $t^{1/2}$, the `-' domains coarsen slightly faster as $t^{1/2}\log (t)$. As a result, at late times, the magnetization decays slowly as, $m(t)=-1 +{\rm const.}/{\log (t)}$. We establish this behavior both analytically within an independent interval approximation (IIA) and numerically. In the zero volume fraction limit of the `+' phase, we argue that the IIA becomes asymptotically exact. Our model can be alternately viewed as a simple Ising model for granular compaction. At late times in our model, the system decays into a fully compact state (where all spins are `-') in a slow logarithmic manner $\sim 1/{\log (t)}$, a fact that has been observed in recent experiments on granular systems.
description: 4 pages Revtex, 3 eps figures, supersedes cond-mat/0002217
Bond-Selective Transient Phase Microscopy
Creators: name: Zhang, Delong
name: Lan, Lu
name: Bai, Yeran
name: Majeed, Hassaan
name: Kandel, Mikhail E.
name: Popescu, Gabriel
name: Cheng, Ji-Xin
Publisher: name: arXiv
Year: 2018
Subjects: subject: Optics (physics.optics)
subject: Biological Physics (physics.bio-ph)
subject: FOS: Physical sciences

description: Phase-contrast microscopy converts the optical phase introduced by transparent, unlabeled specimens into modulation in the intensity image. Modern phase imaging techniques are capable of quantifying phase shift at each point in the field of view, enabling non-destructive applications in materials and life sciences. However, these attractive features come with the lack of molecular information. To fulfill this gap, we developed a bond-selective transient phase (BSTP) microscope using infrared absorption to excite molecular vibration, resulting in an optical phase change detected through a customized phase microscope. By using pulsed pump and probe lasers, we realized BSTP imaging with high spectral fidelity, sub-microsecond temporal resolution, submicron spatial resolution at 50 frames per second, limited only by the camera sensor. Our approach links the missing molecular bond information to the quantitative phase, which paves a new avenue for spectroscopic imaging in biology and materials science.
description: 14 pages, 4 figures
Additional file 2: of What is known about the effects of exercise or training to reduce skeletal muscle impairments of patients with myotonic dystrophy type 1? A scoping review
Creators: name: Marie-Pier Roussel
name: Morin, Marika
name: Gagnon, Cynthia
name: Duchesne, Elise
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Sociology
subject: FOS: Sociology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy

description: Summary of measurements, parameters and exercise or training protocols. (PDF 162 kb)
Law without law or "just" limit theorems?
Creators: name: Caprara, Sergio
name: Vulpiani, Angelo
Publisher: name: arXiv
Year: 2018
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: History and Philosophy of Physics (physics.hist-ph)
subject: FOS: Physical sciences

description: About 35 years ago Wheeler introduced the motto `law without law' to highlight the possibility that (at least a part of) Physics may be understood only following {\em regularity principles} and few relevant facts, rather than relying on a treatment in terms of fundamental theories. Such a proposal can be seen as part of a more general attempt (including the maximum entropy approach) summarized by the slogan `it from bit', which privileges the information as the basic ingredient. Apparently it seems that it is possible to obtain, without the use of physical laws, some important results in an easy way, for instance, the probability distribution of the canonical ensemble. In this paper we will present a general discussion on those ideas of Wheeler's that originated the motto `law without law'. In particular we will show how the claimed simplicity is only apparent and it is rather easy to produce wrong results. We will show that it is possible to obtain some of the results treated by Wheeler in the realm of the statistical mechanics, using precise assumptions and nontrivial results of probability theory, mainly concerning ergodicity and limit theorems.
description: 9 pages, 3 figures
Residual Dynamics Learning for Trajectory Tracking for Multi-rotor Aerial Vehicles
Creators: name: Kulathunga, Geesara
name: Hamed, Hany
name: Klimchik, Alexandr
Publisher: name: arXiv
Year: 2023
Subjects: subject: Robotics (cs.RO)
subject: FOS: Computer and information sciences

description: This paper presents a technique to cope with the gap between high-level planning, e.g., reference trajectory tracking, and low-level controlling using a learning-based method in the plan-based control paradigm. The technique improves the smoothness of maneuvering through cluttered environments, especially targeting low-speed velocity profiles. In such a profile, external aerodynamic effects that are applied on the quadrotor can be neglected. Hence, we used a simplified motion model to represent the motion of the quadrotor when formulating the Nonlinear Model Predictive Control (NMPC)-based local planner. However, the simplified motion model causes residual dynamics between the high-level planner and the low-level controller. The Sparse Gaussian Process Regression-based technique is proposed to reduce these residual dynamics. The proposed technique is compared with Data-Driven MPC. The comparison results yield that an augmented residual dynamics model-based planner helps to reduce the nominal model error by a factor of 2 on average. Further, we compared the proposed complete framework with four other approaches. The proposed approach outperformed the others in terms of tracking the reference trajectory without colliding with obstacles with less flight time without losing computational efficiency.
Correlation-enhanced Friedel oscillations in amorphous alloys and quasicrystals
Creators: name: Kroha, Johann
Publisher: name: arXiv
Year: 1998
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: We show that quantum correlations induced by electron-electron interactions in the presence of random impurity scattering can play an important role in the thermal stabilization of amorphous Hume-Rothery systems: When there is strong backscattering off local, concentrical ion clusters, the static electron density response $χ(0,q)$ acquires a powerlaw divergence at $q=2k_F$ even at elevated temperature. This leads to an enhancement as well as to a systematical phase shift of the Friedel oscillations, both consistent with experiments. The possible importance of this effect in icosahedral quasicrystals is discussed.
description: 3 pages, 2 figures, RevTeX; to be published in proceedings of the 10th int. conference on liquid and amorphous metals LAM10, Physica C (1999)
Additional file 1 of Cooking or heating with solid fuels increased the all-cause mortality risk among mid-aged and elderly People in China
Creators: name: Yang, Yuxiang
name: Liu, Yang
name: Peng, Luolan
name: Zhang, Shuai
name: Yuan, Changzheng
name: Li, Wenyuan
name: Liu, Zuyun
name: Ma, Yanan
Publisher: name: figshare
Year: 2022
Subjects: subject: Space Science
subject: Medicine
subject: Environmental Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Cancer

description: Supplementary Material 1
Bell's inequalities I: An explanation for their experimental violation
Creators: name: Sica, Louis
Publisher: name: arXiv
Year: 2001
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Derivations of two Bell's inequalities are given in a form appropriate to the interpretation of experimental data for explicit determination of all the correlations. They are arithmetic identities independent of statistical reasoning and thus cannot be violated by data that meets the conditions for their validity. Two experimentally performable procedures are described to meet these conditions. Once such data are acquired, it follows that the measured correlations cannot all equal a negative cosine of angular differences. The relation between this finding and the predictions of quantum mechanics is discussed in a companion paper.
description: 15 pages, 2 figures
Order of the phase transition in models of DNA thermal denaturation
Creators: name: Theodorakopoulos, Nikos
name: Dauxois, Thierry
name: Peyrard, Michel
Publisher: name: arXiv
Year: 2000
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Biological Physics (physics.bio-ph)
subject: Biomolecules (q-bio.BM)
subject: FOS: Physical sciences
subject: FOS: Biological sciences

description: We examine the behavior of a model which describes the melting of double-stranded DNA chains. The model, with displacement-dependent stiffness constants and a Morse on-site potential, is analyzed numerically; depending on the stiffness parameter, it is shown to have either (i) a second-order transition with "nu_perpendicular" = - beta = 1, "nu_parallel" = gamma/2 = 2 (characteristic of short range attractive part of the Morse potential) or (ii) a first-order transition with finite melting entropy, discontinuous fraction of bound pairs, divergent correlation lengths, and critical exponents "nu_perpendicular" = - beta = 1/2, "nu_parallel" = gamma/2 = 1.
description: 4 pages of Latex, including 4 Postscript figures. To be published in Phys. Rev. Lett
title: Go local – Forschungs- und Erprobungschancen durch die Gesundheitsregionen Niedersachsen
Creators: name: Oesterle, Lea
name: Preuß, Maren
Publisher: name: German Medical Science GMS Publishing House
Year: 2019
Subjects: subject: 610 Medical sciences; Medicine

description: Hintergrund: Das Projekt „Gesundheitsregionen Niedersachsen“ (GR) entwickelt seit 2014 kommunale Strukturen und innovative Projekte, die eine bedarfsgerechte und wohnortnahe Gesundheitsversorgung, Prävention und Gesundheitsförderung (P&GF) zum Ziel haben. Kommunen kommt [zum vollständigen Text gelangen Sie über die oben angegebene URL]
description: 18. Deutscher Kongress für Versorgungsforschung (DKVF)
title: Wie wirkt sich ein fehlendes stationäres Entlassungsgespräch auf selbstberichteten Behandlungserfolg von Patienten aus?
Creators: name: Zenker, Ronny
name: Voigt, Karen
name: Jonietz, Ansgar
name: Bergmann, Antje
name: Riemenschneider, Henna
Publisher: name: German Medical Science GMS Publishing House
Year: 2019
Subjects: subject: 610 Medical sciences; Medicine

description: Hintergrund: Dass viele stationär behandelte Patienten mit unklaren bzw. unzureichenden Informationen zum Krankenhausaufenthalt und zur weiteren Behandlung entlassen werden [ref:3], kann unter anderem an einem fehlenden Entlassungsgespräch (EG) liegen. Es gibt Evidenz, dass ein [zum vollständigen Text gelangen Sie über die oben angegebene URL]
description: 18. Deutscher Kongress für Versorgungsforschung (DKVF)
MOESM2 of Both candidate gene and neutral genetic diversity correlate with parasite resistance in female Mediterranean mouflon
Creators: name: Portanier, Elodie
name: Garel, Mathieu
name: SĂŠbastien Devillard
name: Maillard, Daniel
name: Poissant, Jocelyn
name: Galan, Maxime
name: Slimania Benabed
name: Marie-ThĂŠrĂ¨Se Poirel
name: Duhayer, Jeanne
name: Itty, Christian
name: Bourgoin, Gilles
Publisher: name: figshare
Year: 2019
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified

description: Additional file 2. Normality tests of non-genetic and genetic models.
Design, Actuation, and Functionalization of Untethered Soft Magnetic Robots with Life-Like Motions: A Review
Creators: name: Miao, Jiaqi
name: Sun, Siqi
Publisher: name: arXiv
Year: 2023
Subjects: subject: Robotics (cs.RO)
subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Computer and information sciences
subject: FOS: Physical sciences

description: Soft robots have demonstrated superior flexibility and functionality than conventional rigid robots. These versatile devices can respond to a wide range of external stimuli (including light, magnetic field, heat, electric field, etc.), and can perform sophisticated tasks. Notably, soft magnetic robots exhibit unparalleled advantages over numerous soft robots (such as untethered control, rapid response, and high safety), and have made remarkable progress in small-scale manipulation tasks and biomedical applications. Despite the promising potential, soft magnetic robots are still in their infancy and require significant advancements in terms of fabrication, design principles, and functional development to be viable for real-world applications. Recent progress shows that bionics can serve as an effective tool for developing soft robots. In light of this, the review is presented with two main goals: (i) exploring how innovative bioinspired strategies can revolutionize the design and actuation of soft magnetic robots to realize various life-like motions; (ii) examining how these bionic systems could benefit practical applications in small-scale solid/liquid manipulation and therapeutic/diagnostic-related biomedical fields.
description: 36 pages, 11 figures
MOESM1 of Both candidate gene and neutral genetic diversity correlate with parasite resistance in female Mediterranean mouflon
Creators: name: Portanier, Elodie
name: Garel, Mathieu
name: SĂŠbastien Devillard
name: Maillard, Daniel
name: Poissant, Jocelyn
name: Galan, Maxime
name: Slimania Benabed
name: Marie-ThĂŠrĂ¨Se Poirel
name: Duhayer, Jeanne
name: Itty, Christian
name: Bourgoin, Gilles
Publisher: name: figshare
Year: 2019
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1. Results of non-genetic model selection.
Effect of Thermal Undulations on the Bending Elasticity and Spontaneous Curvature of Fluid Membranes
Creators: name: Pinnow, H. A.
name: Helfrich, W.
Publisher: name: arXiv
Year: 2000
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: We amplify previous arguments why mean curvature should be used as measure of integration in calculating the effective bending rigidity of fluid membranes subjected to a weak background curvature. The stiffening of the membrane by its fluctuations, recently derived for spherical shapes, is recovered for cylindrical curvature. Employing curvilinear coordinates, we then discuss stiffening for arbitrary shapes, confirm that the elastic modulus of Gaussian curvature is not renormalized in the presence of fluctuations, and show for the first time that any spontaneous curvature also remains unchanged.
description: 26 pages, 2 figures, to appear in EPJ E
title: Wie wirkt sich ein fehlendes stationäres Entlassungsgespräch auf das Wohlbefinden von Patienten aus?
Creators: name: Zenker, Ronny
name: Voigt, Karen
name: Jonietz, Ansgar
name: Bergmann, Antje
name: Riemenschneider, Henna
Publisher: name: German Medical Science GMS Publishing House
Year: 2019
Subjects: subject: 610 Medical sciences; Medicine

description: Hintergrund: Eine Vielzahl an Patienten wird mit unklaren bzw. unzureichenden Informationen zum Krankenhausaufenthalt und zur weiteren Behandlung entlassen [ref:3]. Es gibt Evidenz, dass medikamentenbezogene Probleme mit mangelndem Entlassmanagement (z.B. unzureichende Qualität des Arztbriefes[zum vollständigen Text gelangen Sie über die oben angegebene URL]
description: 18. Deutscher Kongress für Versorgungsforschung (DKVF)
Additional file 1 of Global, regional, and national cancer incidence and death for 29 cancer groups in 2019 and trends analysis of the global cancer burden, 1990–2019
Creators: name: Lin, Longfei
name: Li, Zhiyong
name: Yan, Lei
name: Liu, Yuling
name: Yang, Hongjun
name: Li, Hui
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Science Policy

description: Additional file 1: Fig. S1. The age-standardized deaths of cancers in 21 regions compared with those globally in 2019. Fig. S2. The age-standardized incidence of cancers in 21 regions compared with those globally in 2019. Fig. S3. Comparison of the ASDR(A) and ASIR(B) of 29 cancers in 21 regions between 1990 and 2019. Fig. S4. The case fatality rate (CFR) of cancers in different HDI and SDI regions. Fig. S5. The relative changes in ASDR and ASIR of 29 specified cancer groups between 1990 and 2019. Fig. S6. The age-standardized deaths and incidence of cancers in different countries and territories compared with the global in 2019. (Displays the death numbers for the top 50 countries and territories). Table S1. Death numbers, incidence numbers, ASDR, ASIR, and GAL of pancreatic cancer of 50 countries and territories in 2019. Table S2. Death numbers, incidence numbers, ASDR, ASIR, and GAL of TBL cancer of 50 countries and territories in 2019. Table S3. Death numbers, incidence numbers, ASDR, ASIR, and GAL of female breast cancer patients in 50 countries and territories in 2019. Table S4. Death numbers, incidence numbers, ASDR, ASIR, CFR, and GAL of leukemia in 50 countries and territories in 2019. Table S5. Death numbers, incidence numbers, ASDR, ASIR, and GAL of esophageal cancer of 50 countries and territories in 2019.