cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
sj-docx-1-tam-10.1177_17588359221130502 – Supplemental material for Reconsidering T component of cancer staging for T3/T4 non-small-cell lung cancer with additional nodule
Creators: name: Wang, Fang
name: Su, Hang
name: E, Haoran
name: Hou, Likun
name: Yang, Minglei
name: Xu, Long
name: Gao, Jiani
name: Zhao, Mengmeng
name: Wu, Junqi
name: Deng, Jiajun
name: Xie, Xiaofeng
name: Zhong, Yifan
name: Li, Yingze
name: Wang, Tingting
name: Wu, Chunyan
name: Xie, Dong
name: Chen, Chang
Publisher: name: SAGE Journals
Year: 2022
Subjects: Oncology and Carcinogenesis not elsewhere classified
Aged Health Care
Pharmacology and Pharmaceutical Sciences not elsewhere classified
Respiratory Diseases

description: Supplemental material, sj-docx-1-tam-10.1177_17588359221130502 for Reconsidering T component of cancer staging for T3/T4 non-small-cell lung cancer with additional nodule by Fang Wang, Hang Su, Haoran E, Likun Hou, Minglei Yang, Long Xu, Jiani Gao, Mengmeng Zhao, Junqi Wu, Jiajun Deng, Xiaofeng Xie, Yifan Zhong, Yingze Li, Tingting Wang, Dong Xie, Chunyan Wu and Chang Chen in Therapeutic Advances in Medical Oncology
Additional file 1 of Comparison between the Hamiltonian Monte Carlo method and the Metropolis–Hastings method for coseismic fault model estimation
Creators: name: Yamada, Taisuke
name: Ohno, Keitaro
name: Ohta, Yusaku
Publisher: name: figshare
Year: 2022
Subjects: subject: Statistics
subject: FOS: Mathematics

description: Additional file 1: Figure S1. Results of the convergence test. Figure S2. Trace plots of entire chains. Figure S3. Example of the expression of posterior PDF for variable changed parameters. Figure S4. Result when the chain length is 10 times the main result. Figure S5. Two dimensional (2D)-marginal posterior PDFs of the HMC sampling, including the Burn-in phase. Figure S6. 2D-marginal posterior PDFs of the RWMH sampling, including the burn-in phase. Figure S7. 2D-marginal posterior PDFs of the HMC sampling excluding the Burn-in phase. Figure S8. 2D-marginal posterior PDFs of the RWMH sampling excluding the burn-in phase. Figure S9. Pie chart of the calculation time HMC spend.
title: Return to paid employment after ischemic stroke in young adults – using secondary data for follow-up analyses of a clinical registry
Creators: name: Hardt, Juliane
name: Aarnio, Karoliina
name: Rodríguez Pardo de Donlebún, Jorge
name: Siegerink, Bob
name: Järvenpää, Soila
name: Poutiainen, Erja
name: Kaste, Markku
name: Tatlisumak, Turgut
name: Putaala, Jukka
Publisher: name: German Medical Science GMS Publishing House
Year: 2017
Subjects: subject: Epidemiologie
subject: 610 Medical sciences; Medicine

description: Introduction: Several lines of evidence suggest a rising incidence of ischemic stroke (IS) among young and middle-aged adults, resulting in an increased prevalence of young stroke survivors in the community[ref:1],[ref:2]. Return to vocational activities is among the most important[for full text, please go to the a.m. URL]
description: 62. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie e.V. (GMDS)
title: Die bezaubernde Zitationskarriere eines Kommentars zur Newcastle Ottawa Scale…. oder Metaanalysten lesen ihre Literatur nicht, die sie zitieren
Creators: name: Stang, Andreas
name: Poole, Charles
Publisher: name: German Medical Science GMS Publishing House
Year: 2017
Subjects: subject: Biometrie
subject: Epidemiologie
subject: 610 Medical sciences; Medicine

description: Einleitung: Die Newcastle-Ottawa-Scale (NOS) ist eine Skala zur Beurteilung der Qualität von Beobachtungsstudien und wird vom Cochrane Handbuch (update 2011) zur Verwendung in Metanalysen empfohlen. Kürzliche Studien zum Interobserver-Agreement zeigen eine niedrige Übereinstimmung zwischen[zum vollständigen Text gelangen Sie über die oben angegebene URL]
description: 62. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie e.V. (GMDS)
Pearl Raising in Guangxi Province and Its Importance to the Local Economy
Creators: name: Yangming, Wang
name: Sastra Laoakka
name: Boonsom Yodmalee
Publisher: name: Institute of East Asian Studies, Thammasat University
Year: 2018
Subjects: economy
pearl raising
People's Republic of China

description: International Journal of East Asian Studies, 22, 1, 20-41
Additional file 1 of Chemical modification of wood induced by the traditional making procedures of bowed string musical instruments: the effect of alkaline treatments
Creators: name: Albano, Michela
name: Comelli, Daniela
name: Fiocco, Giacomo
name: Mattonai, Marco
name: Lucejko, Jeannette Jacqueline
name: Zoia, Luca
name: Colombini, Maria Perla
name: Malagodi, Marco
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: Plant Biology

description: Additional file 1: Table SM1. Laboratory models preparation and sampling strategy for the destructive tests. Table SM2. Lignin and Holocellulose pyrolysis products identified in spruce wood and classified into categories. Table SM3. Semi-quantitative results obtained by Py(HMDS)-GC/MS. H/L ratio for the studied samples. Fig. SM1. a* and b* coordinates measured before (empty circle) and after (filled circle) the KOH (red) and the NH3 (blue) treatments, respectively.
Control system design for a morphing unmanned air vehicle wing using shape memory alloy actuators
Creators: name: Abdullah, Ermira Junita Binti
Publisher: name: RMIT University
Year: 2024

description: Morphing wing technology allows modification of aerodynamic behavior of the wing by changing its shape during flight. This can be used to achieve optimum flight performance during cruise and reduction in fuel consumption. For UAVs in particular, the biggest constraint is the limited space available which makes it difficult for a morphing wing to be implemented using conventional mechanical actuators. Shape memory materials are a suitable candidate for actuators in a morphing wing design as they are easy to install and electrically activated. Shape memory alloys (SMA) are lightweight, can produce a large force and consequently large deflections. However, its nonlinear behavior proves to be a major challenge in the development of the controller. This research project investigated the potential of SMA actuator application in a morphing UAV wing design and develops a suitable control system. In order to reduce power consumption and minimise cost, wire bundle SMA actuators were incorporated in the design. Due to the nonlinear behavior of the SMA actuator, it was critical to incorporate a feedback control system that was able to accurately morph the wing shape. The proportional-integral-derivative (PID) controller was used as the baseline for the control system design. It was combined with a compensator in order to improve the controller’s accuracy. Experiments were conducted under wind tunnel conditions at different Reynolds numbers and angles of attack. The wind tunnel experiments verified the robustness of the control system for morphing UAV wing and the effect on aerodynamic performance. The results showed that the use of SMA actuators for wing morphing is feasible and a significant improvement in lift-to-drag ratio was measured when the wing shape was morphed. The penalty associated with morphing a wing is increased weight due to the actuation mechanism and an increase in power required. A trade-off study was conducted and it showed that it was possible to reduce the power required and increase loiter time for medium and large UAVs. The contribution of this research in developing a control system of morphing UAV wing with minimum weight and power penalty by utilizing SMA wire bundle actuator is a stepping stone towards further development of morphing wing technology capable of maintaining high aerodynamic efficiency throughout a UAV cruise and loiter segment. This thesis highlights the issues related to thermal sensitivity and mechanical performance that need to be addressed when integrating SMA actuators in a morphing wing design.
Using Label-Free Raman Spectroscopy Integrated with Microfluidic Chips to Probe Ferroptosis Networks in Cells
Creators: name: Muhammad, Muhammad
name: Shao, Chang-Sheng
name: Nawaz, Raziq
name: Aligayev, Amil
name: Hassan, Muhammad
name: Bashir, Mona Alrasheed
name: Iqbal, Jamshed
name: Zhan, Jie
name: Huang, Qing
Publisher: name: arXiv
Year: 2025
Subjects: subject: Biological Physics (physics.bio-ph)
subject: Cell Behavior (q-bio.CB)
subject: FOS: Physical sciences
subject: FOS: Biological sciences

description: Ferroptosis, a regulated form of cell death driven by oxidative stress and lipid peroxidation, has emerged as a pivotal research focus with implications across various cellular contexts. In this study, we employed a multifaceted approach, integrating label-free Raman spectroscopy and microfluidics to study the mechanisms underpinning ferroptosis. Our investigations included the ferroptosis initiation based on the changes in the lipid Raman band at 1436 cm-1 under different cellular states, the generation of reactive oxygen species (ROS), lipid peroxidation, DNA damage/repair, and mitochondrial dysfunction. Importantly, our work highlighted the dynamic role of vital cellular components, such as NADPH, ferredoxin clusters, and key genes like GPX-4, VDAC2, and NRF2, as they collectively influenced cellular responses to redox imbalance and oxidative stress. Quantum mechanical (QM) and molecular docking simulations (MD) provided further evidence of interactions between the ferredoxin (containing 4Fe-4S clusters), NADPH and ROS which led to the production of reactive Fe species in the cells. As such, our approach offered a real-time, multidimensional perspective on ferroptosis, surpassing traditional biological methods, and providing valuable insights for therapeutic interventions in diverse biomedical contexts.
Additional file 1 of Prognostic PET [11C]-acetate uptake is associated with hypoxia gene expression in patients with late-stage hepatocellular carcinoma – a bench to bed study
Creators: name: Chiu, Keith Wan Hang
name: Tan, Kel Vin
name: Yang, Xinxiang
name: Zhu, Xiaoqiang
name: Shi, Jingjing
name: Chiang, Chi-Leung
name: Chan, Lawrence
name: Hui, Yuan
name: Khong, Pek-Lan
name: Man, Kwan
name: Wong, Jason Wing Hon
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Marine Biology
subject: Cancer
subject: Plant Biology

description: Supplementary Material 1.
sj-docx-1-wes-10.1177_09500170221117415 – Supplemental material for Gender Composition and the Symbolic Value of Occupations: New Evidence of a U-shaped Relationship between Gender and Occupational Prestige Based on German Microdata
Creators: name: Krueger, Sabine
name: Ebner, Christian
name: Rohrbach-Schmidt, Daniela
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 150310 Organisation and Management Theory
subject: FOS: Economics and business
subject: Sociology
subject: FOS: Sociology

description: Supplemental material, sj-docx-1-wes-10.1177_09500170221117415 for Gender Composition and the Symbolic Value of Occupations: New Evidence of a U-shaped Relationship between Gender and Occupational Prestige Based on German Microdata by Sabine Krueger, Christian Ebner and Daniela Rohrbach-Schmidt in Work, Employment and Society
Where to belong: world, destinations and the nature of true home
Creators: name: Robinson, Scott
Publisher: name: RMIT University
Year: 2024

description: Mid-way through Gerald Murnane’s The Plains the narrator states ‘I suspect that every man may be travelling towards the heart of some remote private plain’; a statement that illustrates a central motif in that particular work: the longed-for, personalised destination that is never reached. Similarly, Hervé Guibert’s jaded traveller narrator in Paradise offers ‘I look at photographs of Africa and I can see that Africa does not exist … It is better to dream of Africa than set foot in it’. This exegesis will discuss the attributes and functions of ‘unreachable destinations’ in the aforementioned case studies, and will explore the notions of ‘true homes’ and belonging/not belonging as states of being responding to inauthentic landscapes. The reality of destinations (places) will be discussed with reference to the following: Jean Baudrillard’s theories of simulacra and simulations and the replacing of meaning with signs and symbols; and Marc Augé’s concept of ‘non-places’. It will be argued that unreachable or non-existent destinations in the case studies function to turn the narrative journeys inward. Physical discovery or exploration becomes, instead, selfreflection; an attempt at unpacking a subjective reality in the hope of uncovering an authentic place, a true home.
Continuous-time model predictive control
Creators: name: Truong, Quan
Publisher: name: RMIT University
Year: 2024

description: Model Predictive Control (MPC) refers to a class of algorithms that optimize the future behavior of the plant subject to operational constraints [46]. The merits of the class algorithms include its ability to handle imposed hard constraints on the system and perform on-line optimization.

This thesis investigates design and implementation of continuous time model predictive control using Laguerre polynomials and extends the design ap- proaches proposed in [43] to include intermittent predictive control, as well as to include the case of the nonlinear predictive control.

In the Intermittent Predictive Control, the Laguerre functions are used to describe the control trajectories between two sample points to save the com- putational time and make the implementation feasible in the situation of the fast sampling of a dynamic system.

In the nonlinear predictive control, the Laguerre polynomials are used to describe the trajectories of the nonlinear control signals so that the reced- ing horizon control principle are applied in the design with respect to the nonlinear system constraints.

In addition, the thesis reviews several Quadratic Programming methods and compares their performances in the implementation of the predictive control. The thesis also presents simulation results of predictive control of the autonomous underwater vehicle and the water tank.
"It was information based":  Student Reasoning when Distinguishing Between Scholarly and Popular Sources
Creators: name: Jankowski, Amy
name: Russo, Alyssa
name: Townsend, Lori
Publisher: name: In the Library With the Lead Pipe
Year: 2018
Subjects: college students
evaluation
information literacy
instruction
teaching

description: Scholarly and popular sources are a longstanding construct in library instruction. A quick Google search brings up an abundance of LibGuides and tutorials on the subject. However, we have found that teaching students to identify and classify information sources using a rigid binary categorization is problematic. In an effort to better understand the ways students conceptualize and evaluate sources, we stepped back to ask: what kind of reasoning do students apply when distinguishing between scholarly and popular sources?
Supplemental Material - Examining the Associations of and Interactions Between Intrapersonal and Perceived Environmental Factors With Objectively Assessed Physical Activity Among Rural Midwestern Adults, USA
Creators: name: Serrano, Natalicio
name: Beck, Alan
name: Salvo, Deborah
name: Eyler, Amy
name: Reis, Rodrigo
name: Steensma, Joseph T.
name: Gilbert, Amanda
name: Brownson, Ross C.
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 111799 Public Health and Health Services not elsewhere classified
subject: FOS: Health sciences

description: Supplemental Material for Examining the Associations of and Interactions Between Intrapersonal and Perceived Environmental Factors With Objectively Assessed Physical Activity Among Rural Midwestern Adults, USA by Natalicio Serrano, Alan Beck, Deborah Salvo, Amy Eyler, Rodrigo Reis, Joseph T. Steensma, Amanda Gilbert, and Ross C. Brownson in American Journal of Health Promotion
Bangla Fake News Detection Based On Multichannel Combined CNN-LSTM
Creators: name: George, Md. Zahin Hossain
name: Hossain, Naimul
name: Bhuiyan, Md. Rafiuzzaman
name: Masum, Abu Kaisar Mohammad
name: Abujar, Sheikh
Publisher: name: arXiv
Year: 2025
Subjects: subject: Computation and Language (cs.CL)
subject: Computers and Society (cs.CY)
subject: Machine Learning (cs.LG)
subject: FOS: Computer and information sciences

description: There have recently been many cases of unverified or misleading information circulating quickly over bogus web networks and news portals. This false news creates big damage to society and misleads people. For Example, in 2019, there was a rumor that the Padma Bridge of Bangladesh needed 100,000 human heads for sacrifice. This rumor turns into a deadly position and this misleading information takes the lives of innocent people. There is a lot of work in English but a few works in Bangla. In this study, we are going to identify the fake news from the unconsidered news source to provide the newsreader with natural news or real news. The paper is based on the combination of convolutional neural network (CNN) and long short-term memory (LSTM), where CNN is used for deep feature extraction and LSTM is used for detection using the extracted feature. The first thing we did to deploy this piece of work was data collection. We compiled a data set from websites and attempted to deploy it using the methodology of deep learning which contains about 50k of news. With the proposed model of Multichannel combined CNN-LSTM architecture, our model gained an accuracy of 75.05%, which is a good sign for detecting fake news in Bangla.
description: 5 pages, 2 figures, 2 tables. THE 12th International Conference on Computing, Communication and Networking Technologies, 2021
ВЛИЯНИЕ ТЕХНОЛОГИЙ ВОЗДЕЛЫВАНИЯ И УДОБРЕНИЙ НА РОСТ, РАЗВИТИЕ И УРОЖАЙНОСТЬ СОИ В ЗОНЕ НЕУСТОЙЧИВОГО УВЛАЖНЕНИЯ ЦЕНТРАЛЬНОГО ПРЕДКАВКАЗЬЯ
Creators: name: ГАДЖИУМАРОВ РАСУЛ ГАДЖИУМАРОВИЧ, ЖУКОВА МАЯ ПЕТРОВНА
Publisher: name: Ставропольский государственный аграрный университет (Ставрополь)
Year: 2018

description: Представлены результаты сравнения традиционной технологии возделывания сои и технологии без обработки почвы. Выявлено, что внесение удобрений по обеим технологиям приводит к снижению полевой всхожести семян, изреживанию посевов и достоверному снижению урожайности по сравнению с посевом без внесения удобрений. Технологии возделывания не оказали влияния на качество бобов, у которых по обеим технологиям масличность составила 19 %, содержание белка 42 %.
EFFECT OF NO-TILL TECHNOLOGY ON EROSION RESISTANCE, THE POPULATION OF EARTHWORMS AND HUMUS CONTENT IN SOIL
Creators: name: DRIDIGER V.K., GODUNOVA E.I.
Publisher: name: RESEARCH JOURNAL OF PHARMACEUTICAL, BIOLOGICAL AND CHEMICAL SCIENCES
Year: 2018

description: On chernozem ordinary zone unstable moistening Stavropol edge studied the effect of No-till technology for soil erosion control stability, population earthworms and its content of humus in the first rotation field crop rotation. The studies were conducted in a stationary experiment in 2013-2016, where crop rotation (soybean - winter wheat - sunflower - corn) with traditional crop cultivation technology and the same crop rotation with cultivation of crops using No-till technology are deployed in space by all fields. In the traditional technology, the main soil cultivation for spring crops included stubble plowing in 2 tracks and autumn plowing to a depth of 20-22 cm, winter wheat was subjected to a double treatment with a disc harrow (8-10 cm) and pre-sowing cultivation. In the No-till technology, no treatments were performed, so on the soil surface, on average, 6.36 tons of crop residues were crop rotation fields that provided good wind resistance of the soil and reliably protected it from wind and water erosion. In such soil, earthworms live, the number and mass of which per 1 m2 in the soil layer 0-20 cm is 5.3 and 5.0 times greater than in the soil treated according to traditional technology. During the first rotation of the four-field crop rotation in the 0-30 cm layer of untreated soil, the humus content increased by 0.02-0.15%, whereas in the soil treated according to traditional technology its content in the 0-20 cm layer decreased by 0.02- 0.04%, and only in the layer of 20-30 cm, which were not processed, there was an increase of this index by 0.05%.
Juxtaposition of hierarchical quantities with bipartite Krona charts
Creators: name: Ondov, Brian
name: Phillippy, Adam
Publisher: name: F1000Research
Year: 2017

description: Interactive implementations of hierarchical, radial space-filling displays, such as Sunburst or Krona charts, allow complex datasets to be displayed and explored intuitively. However, to date, these methods have lacked the facility to compare two datasets in a unified visualization, which has limited their usefulness for correlative exploration and assessment of controlled experiments. Here, we address these use cases with bipartite Krona charts, which allow two hierarchical datasets to be explored simultaneously. This allows differences between datasets to be observed easily while preserving the depth and detail inherent in these types of charts.
Viterbi training of Hidden Markov Models for labeled sequences
Creators: name: Theodoropoulou, Margarita C.
name: Mintsopoulos, Ioannis
name: Bagos, Pantelis G.
Publisher: name: F1000Research
Year: 2017

description: Hidden Markov Models (HMMs) are probabilistic models that have been successfully applied during the last years for various tasks in molecular biology (usually Class HMMs). There are two types of problems that must be solved while building an HMM: a. estimating the model parameters (transition and emission probabilities) from the observed sequence and b. finding the hidden sequence of states given the observed sequence (decoding). Traditionally, the parameters of a HMM are optimized according to the Maximum Likelihood criterion, mainly using the efficient Baum-Welch algorithm and the decoding is performed using the standard Viterbi algorithm or the N-best algorithm. A different approach to parameter estimation is Viterbi Training (VT). VT estimates the parameters only of the most probable hidden state sequence already produced by the Viterbi algorithm, rather than maximizing the likelihood of the observed data. Here, we present the development of VT algorithm for labeled sequences. In order to evaluate the VT algorithm we performed tests in a number of important biological problems previously studied by our team (prediction of transmembrane proteins and prediction of signal peptides). In all five biological problems using the VT algorithm, we managed to diminish considerably both the iterations needed and the total time spent on training, with a negligible (if any) decrease in the model’s efficiency. In the era of big data, the efficient and, yet, fast algorithms are an urgent need and we believe that the new algorithm will be useful in this respect.
EL CASTIGO ESTIMULA EL DELITO: EN TORNO  A LA LUCHA CONTRA LA INSEGURIDAD  CIUDADANA
Creators: name: Jaime Araujo Frias
Publisher: name: Zenodo
Year: 2013

description: Sumario: 1. Introducción 2. Crimen y castigo 3. La cárcel exacerba el delito 4. La garantía de los derechos sociales es un freno para el del delito 5. Conclusión 6. Bibliografía. Resumen: la clase política y la población en general siguen creyendo que el castigo es un instrumento eficaz para la lucha contra la inseguridad ciudadana. Sin embargo investigaciones actuales sugieren que esta medida no sólo ha sido y sigue siendo inútil en la lucha contra la misma, sino que también es el estímulo más poderoso. De otro lado las respuestas más efectivas que se han dado y se sugieren para la lucha contra el la inseguridad ciudadana son la garantía y satisfacción de los derechos sociales. Palabras clave: inseguridad ciudadana, castigo, cárcel, desigualdad, derechos sociales.
sj-docx-1-jdr-10.1177_00220345221111386 – Supplemental material for Adolescent and Parent Preferences for Hypodontia: Discrete Choice Experiment
Creators: name: Barber, S.
name: Bekker, H.
name: Marti, J.
name: Pavitt, S.
name: Khambay, B.
name: Meads, D.
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 110599 Dentistry not elsewhere classified
subject: FOS: Clinical medicine
subject: 91299 Materials Engineering not elsewhere classified
subject: FOS: Materials engineering

description: Supplemental material, sj-docx-1-jdr-10.1177_00220345221111386 for Adolescent and Parent Preferences for Hypodontia: Discrete Choice Experiment by S. Barber, H. Bekker, J. Marti, S. Pavitt, B. Khambay and D. Meads in Journal of Dental Research
Extending Hidden Markov Models to allow conditioning on previous observations
Creators: name: Tamposis, Ioannis A.
name: Theodoropoulou, Margarita C.
name: Tsirigos, Konstantinos D.
name: Bagos, Pantelis G.
Publisher: name: F1000Research
Year: 2017

description: Hidden Markov Models (HMMs) are probabilistic models widely used in computational molecular biology. However, the Markovian assumption regarding transition probabilities which dictates that the observed symbol depends only on the current state may not be sufficient for some biological problems. In order to overcome the limitations of the first order HMM, a number of extensions have been proposed in the literature to incorporate past information in HMMs conditioning either on the hidden states, or on the observations, or both. Here, we present a simple extension of the standard HMM in which the current observed symbol (amino acid residue) depends both on the current state and on a series of observed previous symbols. The major advantage of the method is the simplicity in the implementation, which is achieved by properly transforming the observation sequence, using an extended alphabet. Thus, it can utilize all the available algorithms for the training or decoding of HMMs. We investigated the use of several encoding schemes and performed tests in a number of important biological problems previously studied by our team (prediction of transmembrane proteins and prediction of signal peptides). The evaluation shows that, when enough data is available, the performance was increased by 1.5%-8% and the existing prediction methods can be improved using this approach. The methods, for which the improvement was significant (PRED-TMBB2, PRED-TAT and HMM-TM), are available as web-servers freely accessible to academic users at www.compgen.org/tools/.
Additional file 2 of Intron losses and gains in the nematodes
Creators: name: Ma, Ming-Yue
name: Xia, Ji
name: Shu, Kun-Xian
name: Niu, Deng-Ke
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 2. Figure S1. Ancestral intron densities during the evolution of nematodes. Figure S2. Rates of intron losses and gains during the evolution of nematodes. Figure S3. Phylogenetic tree of Caenorhabditis andoutgroups. Figure S4. The identities of multiple sequence alignment.
sj-docx-2-sgo-10.1177_21582440231175371 – Supplemental material for Examining Factors That Influence Learner Retention in MOOCs During the COVID-19 Pandemic Time
Creators: name: Yu, Zhonggen
name: Yu, Liheng
Publisher: name: SAGE Journals
Year: 2023
Subjects: subject: 200199 Communication and Media Studies not elsewhere classified
subject: FOS: Media and communications
subject: 160299 Criminology not elsewhere classified
subject: FOS: Law
subject: Education
subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: Sociology
subject: FOS: Sociology

description: Supplemental material, sj-docx-2-sgo-10.1177_21582440231175371 for Examining Factors That Influence Learner Retention in MOOCs During the COVID-19 Pandemic Time by Zhonggen Yu and Liheng Yu in SAGE Open
Additional file 1 of Putting the cart before the horse: mixed-methods participatory investigation of working equid harnessing practices in three selected towns of the Oromia national regional state in Ethiopia
Creators: name: Merridale-Punter, Mathilde S.
name: Elias, Belay
name: Wodajo, Abel L.
name: El-Hage, Charles M.
name: Zewdu, Hanna
name: Tesfaye, Reta
name: Hailegebreal, Gizachew
name: Sori, Teshale
name: Wiethoelter, Anke K.
name: Hitchens, Peta L.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Science Policy

description: Supplementary Material 1
Additional file 1 of Does the growing of Bt maize change abundance or ecological function of non-target animals compared to the growing of non-GM maize? A systematic review
Creators: name: Meissle, Michael
name: Naranjo, Steven E.
name: Romeis, Jörg
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Biotechnology
subject: Ecology
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy
subject: Plant Biology

description: Additional file 1: Literature search (2 Tables).
Additional file 2 of Putting the cart before the horse: mixed-methods participatory investigation of working equid harnessing practices in three selected towns of the Oromia national regional state in Ethiopia
Creators: name: Merridale-Punter, Mathilde S.
name: Elias, Belay
name: Wodajo, Abel L.
name: El-Hage, Charles M.
name: Zewdu, Hanna
name: Tesfaye, Reta
name: Hailegebreal, Gizachew
name: Sori, Teshale
name: Wiethoelter, Anke K.
name: Hitchens, Peta L.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Science Policy

description: Supplementary Material 2
Impact of Perfect Fluid Dark Matter on the Thermodynamics of $AdS$ Ayón--Beato--García Black Holes
Creators: name: Kumar, Amit
name: Singh, Dharm Veer
name: Upadhyay, Sudhaker
Publisher: name: arXiv
Year: 2025
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: In this paper, we derive the black hole solution in the context of nonlinear electrodynamics (NLED) coupled to a perfect fluid dark matter (PFDM) field. The resulting black hole solution interpolates between the $AdS$ Ayón--Beato--García (ABG) black hole in the absence of the PFDM field and the Schwarzschild black hole devoid of magnetic monopole charges and PFDM influence. A numerical investigation of the horizon structure and thermodynamic properties, including both local and global stability, is conducted for the obtained black hole solution. The thermodynamic quantities are shown to be modified by the presence of the NLED and PFDM fields. We observe that the behaviour of thermodynamical quantities of black holes depends on these parameters significantly. We also discuss the stability and phase transition dependency on these parameters.
description: 17 pages, 14 captioned figures, published in JHAP
Network Simulator-centric Compositional Testing
Creators: name: Rousseaux, Tom
name: Crochet, Christophe
name: Aoga, John
name: Legay, Axel
Publisher: name: arXiv
Year: 2025
Subjects: subject: Software Engineering (cs.SE)
subject: Cryptography and Security (cs.CR)
subject: Networking and Internet Architecture (cs.NI)
subject: Symbolic Computation (cs.SC)
subject: FOS: Computer and information sciences

description: This article introduces a novel methodology, Network Simulator-centric Compositional Testing (NSCT), to enhance the verification of network protocols with a particular focus on time-varying network properties. NSCT follows a Model-Based Testing (MBT) approach. These approaches usually struggle to test and represent time-varying network properties. NSCT also aims to achieve more accurate and reproducible protocol testing. It is implemented using the Ivy tool and the Shadow network simulator. This enables online debugging of real protocol implementations. A case study on an implementation of QUIC (picoquic) is presented, revealing an error in its compliance with a time-varying specification. This error has subsequently been rectified, highlighting NSCT's effectiveness in uncovering and addressing real-world protocol implementation issues. The article underscores NSCT's potential in advancing protocol testing methodologies, offering a notable contribution to the field of network protocol verification.
sj-docx-1-jdr-10.1177_00220345231169220 – Supplemental material for Autophagy Plays a Crucial Role in Ameloblast Differentiation
Creators: name: Iwaya, C.
name: Suzuki, A.
name: Shim, J.
name: Ambrose, C. G.
name: Iwata, J.
Publisher: name: SAGE Journals
Year: 2023
Subjects: subject: 110599 Dentistry not elsewhere classified
subject: FOS: Clinical medicine
subject: 91299 Materials Engineering not elsewhere classified
subject: FOS: Materials engineering

description: Supplemental material, sj-docx-1-jdr-10.1177_00220345231169220 for Autophagy Plays a Crucial Role in Ameloblast Differentiation by C. Iwaya, A. Suzuki, J. Shim, C. G. Ambrose and J. Iwata in Journal of Dental Research
Additional file 2 of Does the growing of Bt maize change abundance or ecological function of non-target animals compared to the growing of non-GM maize? A systematic review
Creators: name: Meissle, Michael
name: Naranjo, Steven E.
name: Romeis, Jörg
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Biotechnology
subject: Ecology
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy
subject: Plant Biology

description: Additional file 2: References included in the full text screening.
Effects of pulsed electric field processing on milk properties: nonthermal processing of milk
Creators: name: Shamsi, Kambiz
Publisher: name: RMIT University
Year: 2024

description: The PEF treatments were conducted at field intensities of 25-37 kV cm-1 (up to 50 kV cm-1)and temperature range of 30°C to 75ºC. Native milk enzymes selected for the study included alkaline phosphatase, lipase, xanthine oxidase and plasminand microbiological study included determining Total Plate Count (TPC) and Pseudomonas and Enterobacteriaceae counts in skim milk.

At 30ºC PEF treatment at maximum field intensity inactivated AlP by 42% while at 60oC inactivation was higher (67%). Under these treatment conditions less than1 log reduction in TPC and Pseudomonas count and 2.1 logs reduction in the Enterobacteriaceae count was achieved at 30oC while at 60ºC TPC dropped by 2.4 logs and Pseudomonas and Enterobacteriaceae counts were reduced by 5.9 and 2.1 logs, respectively to below the detection limit of 1 CFU mL-1.

Combining PEF treatment with heat increased the inactivation level of all enzymes which showed an increasing trend with increasing field intensity and temperature. Treatment time (4.8, 9.6, 19.2, 28.8 and 38.4 µs) was controlled by either changing the pulse frequencies (100-400 Hz) or product flow rate (30-240 mL min-1) at a constant field intensity of 31 kV cm-1 and it was found that changing the flow rate was a more effective way of enzyme inactivation than changing the frequency due to longer exposure time of enzymes to heat and field intensity.

The size of casein micelles and fat globules was not affected by PEF treatment while severe heating of milk at 97oC for 10 min decreased both micelle and fat globule sizes marginally. The coagulation time of rennet-induced gels made from PEF-treated (35 to 50 kV cm-1) milks (whole and skim) increased as the treatment intensity increased, but remained shorter than gels made from pasteurised milk.

The PEF treatment of milk at various field intensities and temperatures adversely affected the G′, G′′ and firmness of gels, but the effects were less pronounced than in gels made from pasteurised milks.

This study concludes that for successful application in milk processing the PEF treatment needs to be combined with mild heat treatment. This approach could achieve safer milk with less damage to milk functionality. However, the quest for a suitable quality assurance indicator enzyme will need more extensive studies.
sj-docx-1-dps-10.1177_10442073231177384 – Supplemental material for Foreign Language Learning and Learning Disabilities: An Historical, Empirical, and Cultural Perspective for Policies and Procedures
Creators: name: Sparks, Richard L.
Publisher: name: SAGE Journals
Year: 2023
Subjects: subject: Education
subject: 160512 Social Policy
subject: FOS: Political science
subject: 130312 Special Education and Disability
subject: FOS: Educational sciences

description: Supplemental material, sj-docx-1-dps-10.1177_10442073231177384 for Foreign Language Learning and Learning Disabilities: An Historical, Empirical, and Cultural Perspective for Policies and Procedures by Richard L. Sparks in Journal of Disability Policy Studies
СБОР И КОЛЛЕКЦИОНИРОВАНИЕ НАСЕКОМЫХ
Creators: name: ЧЕНИКАЛОВА ЕЛЕНА ВЛАДИМИРОВНА, ГОДУНОВА ЕВГЕНИЯ ИВАНОВНА
Publisher: name: ООО «Ставропольское издательство «Параграф»
Year: 2018

description: В пособии описаны история и научно-познавательное значение коллекционирования насекомых, методы и приспособления для сбора этих организмов в разных станциях, правила составления энтомологических коллекций, их оформления и хранения.
Книга составлена в помощь аспирантам и молодым ученым-зоологам, прикладным энтомологам, агрономам по защите растений. Пособие может быть использовано в учебном процессе для студентов, аспирантов биологических и аграрных специальностей, учителей школ, кружков дополнительного образования.
Comparative Analysis of Lightweight Kubernetes Distributions for Edge Computing: Security, Resilience and Maintainability
Creators: name: Yakubov, Diyaz
name: Hästbacka, David
Publisher: name: arXiv
Year: 2025
Subjects: subject: Cryptography and Security (cs.CR)
subject: FOS: Computer and information sciences

description: The increasing demand for real-time data processing in Internet of Things (IoT) devices has elevated the importance of edge computing, necessitating efficient and secure deployment of applications on resource-constrained devices. Kubernetes and its lightweight distributions (k0s, k3s, KubeEdge, and OpenYurt) extend container orchestration to edge environments, but their security, reliability, and maintainability have not been comprehensively analyzed. This study compares Kubernetes and these lightweight distributions by evaluating security compliance using kube-bench, simulating network outages to assess resiliency, and documenting maintainability. Results indicate that while k3s and k0s offer superior ease of development due to their simplicity, they have lower security compliance compared to Kubernetes, KubeEdge, and OpenYurt. Kubernetes provides a balanced approach but may be resource-intensive for edge deployments. KubeEdge and OpenYurt enhance security features and reliability under network outages but increase complexity and resource consumption. The findings highlight trade-offs between performance, security, resiliency, and maintainability, offering insights for practitioners deploying Kubernetes in edge environments.
description: Project's repository: https://github.com/DiyazY/iot-edge
title: TG3: Initial data analysis
Creators: name: Schmidt, Carsten Oliver
name: le Cessie, Saskia
name: Vach, Werner
name: Huebner, Marianne
Publisher: name: German Medical Science GMS Publishing House
Year: 2017
Subjects: subject: Biometrie
subject: 610 Medical sciences; Medicine

description: This talk introduces and discusses aims, elements, and outputs of initial data analyses (IDA) in the scientific research process. The key aim of IDA is to facilitate responsible and valid scientific analyses with a targeted data set. It therefore typically precedes research question driven statistical[zum vollständigen Text gelangen Sie über die oben angegebene URL]
description: 62. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie e.V. (GMDS)
title: Measures for Subjective Evidence – A comparative mini-review
Creators: name: Recchia, Daniela R.
name: Ostermann, Thomas
Publisher: name: German Medical Science GMS Publishing House
Year: 2017
Subjects: subject: Biometrie
subject: 610 Medical sciences; Medicine

description: Introduction: In the past years, the development of the so-called evidence-based practice has developed rapidly in almost all areas of the life sciences. With a steadily growing number of clinical trials in the past decades, the connection to the personal experience knowledge of experts has been put[for full text, please go to the a.m. URL]
description: 62. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie e.V. (GMDS)
Additional file 3 of Does the growing of Bt maize change abundance or ecological function of non-target animals compared to the growing of non-GM maize? A systematic review
Creators: name: Meissle, Michael
name: Naranjo, Steven E.
name: Romeis, Jörg
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Biotechnology
subject: Ecology
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy
subject: Plant Biology

description: Additional file 3: Narrative summary and tables—studies relevant for the systematic review but not fitting the database for quantitative analyses (5 Tables).
title: Vergleich von drei Verfahren des Textminings für die quantitative Inhaltsanalyse von Patientenberichten
Creators: name: Sander, Uwe
name: Zubke, Maximilian
name: Patzelt, Christiane
Publisher: name: German Medical Science GMS Publishing House
Year: 2017
Subjects: subject: Epidemiologie
subject: 610 Medical sciences; Medicine

description: Einleitung: In einem patientenzentrierten Gesundheitswesen erhalten Erfahrungen von Patienten zunehmend Gewicht. Neben Patientenbefragungen durch Krankenhäusern oder Krankenkassen, Patient Reported Outcomes (PROMs) zur Erhebung der Ergebnisse von Behandlungen und Beschwerden von Patienten äußern[zum vollständigen Text gelangen Sie über die oben angegebene URL]
description: 62. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie e.V. (GMDS)
Multi-Agent System for AI-Assisted Extraction of Narrative Arcs in TV Series
Creators: name: Balestri, Roberto
name: Pescatore, Guglielmo
Publisher: name: arXiv
Year: 2025
Subjects: subject: Computation and Language (cs.CL)
subject: Artificial Intelligence (cs.AI)
subject: Multiagent Systems (cs.MA)
subject: Multimedia (cs.MM)
subject: FOS: Computer and information sciences

description: Serialized TV shows are built on complex storylines that can be hard to track and evolve in ways that defy straightforward analysis. This paper introduces a multi-agent system designed to extract and analyze these narrative arcs. Tested on the first season of Grey's Anatomy (ABC 2005-), the system identifies three types of arcs: Anthology (self-contained), Soap (relationship-focused), and Genre-Specific (strictly related to the series' genre). Episodic progressions of these arcs are stored in both relational and semantic (vectorial) databases, enabling structured analysis and comparison. To bridge the gap between automation and critical interpretation, the system is paired with a graphical interface that allows for human refinement using tools to enhance and visualize the data. The system performed strongly in identifying Anthology Arcs and character entities, but its reliance on textual paratexts (such as episode summaries) revealed limitations in recognizing overlapping arcs and subtler dynamics. This approach highlights the potential of combining computational and human expertise in narrative analysis. Beyond television, it offers promise for serialized written formats, where the narrative resides entirely in the text. Future work will explore the integration of multimodal inputs, such as dialogue and visuals, and expand testing across a wider range of genres to refine the system further.
description: 17th International Conference on Agents and Artificial Intelligence, Porto (Portugal). 23/02/2025 - 25/02/2025
Additional file 1 of Social determinants of health and disparities in pediatric trauma care: protocol for a systematic review and meta-analysis
Creators: name: Gnanvi, Janyce Eunice
name: Yanchar, Natalie
name: Freire, Gabrielle
name: Beaulieu, Emilie
name: Tardif, Pier-Alexandre
name: Bérubé, Mélanie
name: Macpherson, Alison
name: Pike, Ian
name: Zemek, Roger
name: Gagnon, Isabelle J.
name: Carsen, Sasha
name: Gabbe, Belinda
name: Gnanou, Soualio
name: Duval, Cécile
name: Moore, Lynne
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1. PRISMA-P 2015 Checklist.
TAXONOMY AND PALAEOECOLOGY OF CONTINENTAL GASTROPODA (MOLLUSCA) FROM THE LATE PLEISTOCENE MAMMOTH-BEARING SITE OF BULLENDORF IN NE AUSTRIA
Creators: name: CAROBENE, DARIA
name: HARZHAUSER, MATHIAS
name: MANDIC, OLEG
name: GATTO, ROBERTO
Publisher: name: Rivista Italiana di Paleontologia e Stratigrafia (Research In Paleontology and Stratigraphy)
Year: 2018
Subjects: Pupilla-fauna; loess; palaeoenvironment; Pleistocene; biodiversity.

description: We present a taxonomic and palaeoecological analysis of a continental mollusc fauna from a mammoth-bearing succession near Bullendorf in Lower Austria. The taxonomic analysis comprises morphological descriptions and SEM documentation of 15 Pleistocene gastropod species. A Principal Component Analysis of the quantitative and qualitative composition of the investigated samples reveals a stratigraphic succession of four mollusc assemblages defined herein as Galba truncatula assemblage, Succinella oblonga assemblage, Pupilla muscorum/loessica and Pupilla alpicola/sterrii assemblages. The autecological requirements of the species of each assemblage allow a reconstruction of the palaeoenvironmental history of the section with alternating dry and humid conditions within a general cooling trend. Despite generally low mollusc density and species richness, the Bullendorf site allows important insight into latest Quaternary regional environmental conditions and climate. Based on the comparison with similar mollusc sites across Europe, a biostratigraphic correlation with the Late Pleistocene (~110–12 ka) is proposed.
description: Rivista Italiana di Paleontologia e Stratigrafia (Research In Paleontology and Stratigraphy), V. 124, N. 3 (2018)
title: Von der Einzelfallbetrachtung zur strukturierten Analyse von CIRS-Fällen – die Analyse von 52 Fällen aus dem CIRSmedical
Creators: name: Schröder, Cornelia
name: Tetzlaff, Laura
name: Beck, Eberhard
name: Löwe, Katharina
name: Schrader, Thomas
Publisher: name: German Medical Science GMS Publishing House
Year: 2017
Subjects: subject: Medizinische Informatik
subject: 610 Medical sciences; Medicine

description: Einleitung: Critical Incident Reporting Systeme (CIRS) sind Meldesysteme für kritische Ereignisse, um die Patientensicherheit in medizinischen Einrichtungen zu verbessern. Die Analyse der anonymisierten Meldungen von Beinahe-Schäden trägt zu einem wesentlichen Lernprozess bei. Neben krankenhausinternen[zum vollständigen Text gelangen Sie über die oben angegebene URL]
description: 62. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie e.V. (GMDS)
Additional file 4 of Does the growing of Bt maize change abundance or ecological function of non-target animals compared to the growing of non-GM maize? A systematic review
Creators: name: Meissle, Michael
name: Naranjo, Steven E.
name: Romeis, Jörg
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Biotechnology
subject: Ecology
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy
subject: Plant Biology

description: Additional file 4: Rules for extraction of data for the database.