cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1: of Validation of [18F]FLT as a perfusion-independent imaging biomarker of tumour response in EGFR-mutated NSCLC patients undergoing treatment with an EGFR tyrosine kinase inhibitor
Creators: name: R. Iqbal
name: G. Kramer
name: V. Frings
name: E. Smit
name: O. Hoekstra
name: R. Boellaard
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Cell Biology
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Science Policy
subject: Plant Biology

description: Figure S1. A representation of different voxel distribution patterns. The presented distributions are hypothetical. The independent classification consists of voxels classified in two categories, low and high, for TBF and [18F]FLT V T independently (independent classification). A combination of these classifications results in the multiparametric classification, where voxels are classified into four categories: lowTBF-lowV T (category 1), lowTBF-highV T (category 2), highTBF-lowV T (category 3), highTBF-highV T (category 4). Figure S2. A representation of three possible patterns of voxel clustering. (a) Pattern which represents maximal clustering. (b) Pattern which represents optimal clustering with voxels classified in four different categories. (c) Pattern which represents random distribution of voxels classified in four different categories. (DOC 215Â kb)
Regularization effects in the Nambu-Jona-Lasinio model: Strong scheme dependence of inhomogeneous phases and persistence of the moat regime
Creators: name: Pannullo, Laurin
name: Wagner, Marc
name: Winstel, Marc
Publisher: name: arXiv
Year: 2024
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: This work investigates the phase structure of the non-renormalizable (3+1)-dimensional Nambu-Jona-Lasinio (NJL) model with particular focus on inhomogeneous phases (IPs), where the chiral condensate is non-uniform in space, and the closely related moat regimes, where mesonic dispersion relations favor non-vanishing momenta. We use the mean-field approximation and consider five different regularization schemes including three lattice discretizations. The results within the different regularization schemes are systematically analyzed in order to study the dependence of the IP on the choice of regulatization scheme and regulator value. The IP exhibits a drastic dependence on the chosen regularization scheme rendering any physical interpretation of results on inhomogeneous phases in this model doubtful. In contrast, we find only a mild scheme dependence of the moat regime suggesting that its existence is a consequence of the action of the NJL model and its symmetries and, thus, that it might also exist in QCD.
description: 16 pages, 11 figures, 12 pages appendix & references, v2: version as accepted for publication in Physical Review D, added a data publication containing all the plotted data
Salvia aegyptiaca Linnaeus, 1753, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1753
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Lamiales
Lamiaceae
Salvia
Salvia aegyptiaca

description: Salvia aegyptiaca, spec. nov.
 1. Salvia foliis lineari-lanceolatis denticulatis, floribus petiolatis. Hort. cliff. 13. * Roy. lugdb. 309.
 Horminum aegyptium minimum ramosissimum. Lippi. Boerh. lugdb.1. p.66.
 Habitat in AEgypto .
description: Published as part of Linnaeus, Carolus, 1753, Species plantarum: exhibentes plantas rite cognitas, ad genera relatas, cum differentiis specificis, nominibus trivialibus, synonymis selectis, locis natalibus, secundum systema sexuale digestas, Stockholm :Laurentius Salvius on page 23, DOI: 10.5281/zenodo.3931989
Modification of structural disorder by hydrostatic-pressure in superconducting YBa$_{2}$Cu$_{3}$O$_{6.73}$ cuprate
Creators: name: Huang, H.
name: Jang, H.
name: Fujita, M.
name: Nishizaki, T.
name: Lin, Y.
name: Wang, J.
name: Ying, J.
name: Smith, J. S.
name: Kenney-Benson, C.
name: Shen, G.
name: Mao, W.
name: Kao, C. -C.
name: Liu, Y. -J.
name: Lee, J. -S.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: Compelling efforts to improve the critical temperature ($T_{c}$) of superconductors have been made through high-pressure application. Understanding the underlying mechanism behind such improvements is critically important, however, much remains unclear. Here we studied ortho-III YBa$_{2}$Cu$_{3}$O$_{6.73}$ (YBCO) using x-ray scattering under hydrostatic-pressure (HP) up to ~6.0 GPa. We found the reinforced oxygen order (OO) of YBCO under HP, revealing an oxygen rearrangement in the Cu-O layer, which evidently shows the charge transfer phenomenon between the CuO$_{2}$ plane and Cu-O layer. Concurrently, we also observed no disorder-pinned charge density wave (CDW) signature in CuO$_{2}$ plane under HP. This indicates that the oxygen rearrangement modifies the quenched disorder state in the CuO$_{2}$ plane. Using these results, we appropriately explain why pressure-condition can achieve higher $T_{c}$ compared with the optimal $T_{c}$ under ambient pressure in YBa$_{2}$Cu$_{3}$O$_{6+x}$. As an implication of these results, finally, we have discussed that the change in disorder could make it easier for YBa$_{2}$Cu$_{3}$O$_{6+x}$ to undergo a transition to the nematic order under an external magnetic field.
description: 24 pages, 6 figures
Monarda ciliata Linnaeus, 1753, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1753
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Lamiales
Lamiaceae
Monarda
Monarda ciliata

description: Monarda ciliata, spec. nov.
5. Monarda floribus verticillatis, corollis involucro longioribus.
 Monarda spica interrupta, involucris longitudine verticillorum lanceolatis. Gron. virg.9. *
 Clinopodium angustifolium non ramosum, flore caeruleo: labio trifidis atropurpureis maculis ornato. Pluk. alm. 10. t.164. f.3. Moris. hist.3. p.374. s.11. t.8. f.6.
 Habitat in Virginia .
description: Published as part of Linnaeus, Carolus, 1753, Species plantarum: exhibentes plantas rite cognitas, ad genera relatas, cum differentiis specificis, nominibus trivialibus, synonymis selectis, locis natalibus, secundum systema sexuale digestas, Stockholm :Laurentius Salvius on page 23, DOI: 10.5281/zenodo.3931989
The Nonlinear Evolution of Rare Events
Creators: name: Bernardeau, F.
Publisher: name: arXiv
Year: 1993
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: In this paper I consider the nonlinear evolution of a rare density fluctuation in a random density field with Gaussian fluctuations, and I rigorously show that it follows the spherical collapse dynamics applied to its mean initial profile. This result is valid for any cosmological model and is independent of the shape of the power spectrum. In the early stages of the dynamics the density contrast of the fluctuation is seen to follow with a good accuracy the form $$δ=(1-δ_L/1.5)^{-1.5}-1,$$ where $δ_L$ is the linearly extrapolated overdensity. I then investigate the validity domain of the rare event approximation in terms of the parameter $ν=δ_L/σ$ giving the initial overdensity scaled by the rms fluctuation at the same mass scale, and find that it depends critically on the shape of the power spectrum. When the power law index $n$ is lower than $-1$ the departure from the spherical collapse is expected to be small, at least in the early stages of the dynamics, and even for moderate values of $ν$ ($\vertν\vert\ge 2$). However, for $n\ge -1$ and whatever the value of $ν$, the dynamics seems to be dominated by the small--scale fluctuations and the subsequent evolution of the peak may not be necessarily correlated to its initial overdensity. I discuss the implications of these results for the nonlinear dynamics and the formation of astrophysical objects.
description: 43 pages in Plain TeX, 8 postscript figures available upon request, CITA 93/14, Astrophysical Journal (in press) May 10th, 1994 issue
Discovering Non-Abelian Weak Couplings and an Anomalous Magnetic Dipole Moment of the $W^{\pm}$ at LEP~2
Creators: name: Kuss, I.
name: Schildknecht, D.
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: In view of the forthcoming results on $W^{\pm}$ pair production at LEP~2, we emphasize that {\em direct empirical evidence} on non-trivial properties of the weak vector bosons can be obtained with relatively limited integrated luminosity. An integrated luminosity of $10\;\mathrm{pb}^{-1}$ at $\sqrt{s}=175$ GeV will be sufficient to provide direct experimental evidence for non-vanishing self-couplings of non-Abelian type among the weak vector bosons. An integrated luminosity of $100\;\mathrm{pb}^{-1}$ at $\sqrt{s}=175$ GeV will provide direct evidence for the existence of an anomalous magnetic dipole moment of the charged vector bosons $W^{\pm}$.
description: 6 pages LaTeX + 2 Figures; Revised Version contains correction of an erroneous formulation made in connection with the principle of minimal substitution; the title has been changed
Monarda punctata Linnaeus, 1753, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1753
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Lamiales
Lamiaceae
Monarda
Monarda punctata

description: Monarda punctata, spec. nov.
 4. Monarda floribus verticillatis, corollis punctactis. Hort. ups.12.
 Monarda floribus verticillatis. Hort. cliff. 495. Gron. virg.9. Roy. lugdb. 313.
 Clinopodium virginianum angustifolium, quovis verticillo 23 B4 duodecim foliolis rubentibus cincto. Pluk. Alm. 111. t.24. f.1.
 Habitat in Virginia . ☉
description: Published as part of Linnaeus, Carolus, 1753, Species plantarum: exhibentes plantas rite cognitas, ad genera relatas, cum differentiis specificis, nominibus trivialibus, synonymis selectis, locis natalibus, secundum systema sexuale digestas, Stockholm :Laurentius Salvius on pages 22-23, DOI: 10.5281/zenodo.3931989
Additional file 4 of Phylogenomics of palearctic Formica species suggests a single origin of temporary parasitism and gives insights to the evolutionary pathway toward slave-making behaviour
Creators: name: Romiguier, Jonathan
name: Rolland, Jonathan
name: Morandin, Claire
name: Keller, Laurent
Publisher: name: figshare
Year: 2018
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Figure S4 Phylogenetic tree of the GAPLESS supermatrix (621,307Â bp) built using PhyloBayes (two independent Markov chains, 15,000 generations). (PDF 2 kb)
The Green Bank Ammonia Survey: Dense Cores Under Pressure in Orion A
Creators: name: Kirk, Helen
name: Friesen, Rachel K.
name: Pineda, Jaime E.
name: Rosolowsky, Erik
name: Offner, Stella S. R.
name: Matzner, Christopher D.
name: Myers, Philip C.
name: Di Francesco, James
name: Caselli, Paola
name: Alves, Felipe O.
name: Chacón-Tanarro, Ana
name: Chen, How-Huan
name: Chen, Michael Chun-Yuan
name: Keown, Jared
name: Punanova, Anna
name: Seo, Young Min
name: Shirley, Yancy
name: Ginsburg, Adam
name: Hall, Christine
name: Singh, Ayushi
name: Arce, Héctor G.
name: Goodman, Alyssa A.
name: Martin, Peter
name: Redaelli, Elena
Publisher: name: arXiv
Year: 2017
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We use gas temperature and velocity dispersion data from the Green Bank Ammonia Survey and core masses and sizes from the James Clerk Maxwell Telescope Gould Belt Survey to estimate the virial states of dense cores within the Orion A molecular cloud. Surprisingly, we find that almost none of the dense cores are sufficiently massive to be bound when considering only the balance between self-gravity and the thermal and non-thermal motions present in the dense gas. Including the additional pressure binding imposed by the weight of the ambient molecular cloud material and additional smaller pressure terms, however, suggests that most of the dense cores are pressure confined.
description: Accepted for publication in ApJ Aug 10, 2017
QCD Structure of Leptons
Creators: name: Slominski, Wojciech
name: Szwed, Jerzy
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The QCD structure of the electron is defined and calculated. The leading order splitting functions are extracted, showing an important contribution from $γ$-$Z$ interference. Leading logarithmic QCD evolution equations are constructed and solved in the asymptotic region where log$^2$ behaviour of the parton densities is observed. Corrections to the naive evolution procedure are demonstrated. Possible applications with clear manifestation of 'resolved' photon and weak bosons are discussed.
description: 10 pages, 5 figures, revised version
Ziziphora acinoides Linnaeus, 1753, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1753
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Lamiales
Lamiaceae
Ziziphora
Ziziphora acinoides

description: Ziziphora acinoides, spec. nov.
3. Ziziphora floribus lateralibus, foliis ovatis.
 Clinopodium supinum incanum. Amm. ruth. 66?
 Habitat in Sibiria . ☉
 Habitus Thymi Acinos, sed majora quintuplo omnia. Folia Z.capitatae; Flores laterales ut in Z.tenuiore2, sed copiosiores. Calyces similiter hispidi; stamina extracorollae tubum protrusa.
description: Published as part of Linnaeus, Carolus, 1753, Species plantarum: exhibentes plantas rite cognitas, ad genera relatas, cum differentiis specificis, nominibus trivialibus, synonymis selectis, locis natalibus, secundum systema sexuale digestas, Stockholm :Laurentius Salvius on page 22, DOI: 10.5281/zenodo.3931989
Comparing the Effects of Visual, Haptic, and Visuohaptic Encoding on Memory Retention of Digital Objects in Virtual Reality
Creators: name: Rodrigues, Lucas Siqueira
name: Schmidt, Timo Torsten
name: Nyakatura, John
name: Zachow, Stefan
name: Israel, Johann Habakuk
name: Kosch, Thomas
Publisher: name: arXiv
Year: 2024
Subjects: subject: Human-Computer Interaction (cs.HC)
subject: FOS: Computer and information sciences

description: Although Virtual Reality (VR) has undoubtedly improved human interaction with 3D data, users still face difficulties retaining important details of complex digital objects in preparation for physical tasks. To address this issue, we evaluated the potential of visuohaptic integration to improve the memorability of virtual objects in immersive visualizations. In a user study (N=20), participants performed a delayed match-to-sample task where they memorized stimuli of visual, haptic, or visuohaptic encoding conditions. We assessed performance differences between these encoding modalities through error rates and response times. We found that visuohaptic encoding significantly improved memorization accuracy compared to unimodal visual and haptic conditions. Our analysis indicates that integrating haptics into immersive visualizations enhances the memorability of digital objects. We discuss its implications for the optimal encoding design in VR applications that assist professionals who need to memorize and recall virtual objects in their daily work.
Asymmetric Matrix-Valued Covariances for Multivariate Random Fields on Spheres
Creators: name: Alegría, Alfredo
name: Porcu, Emilio
name: Furrer, Reinhard
Publisher: name: arXiv
Year: 2017
Subjects: subject: Statistics Theory (math.ST)
subject: FOS: Mathematics

description: Matrix-valued covariance functions are crucial to geostatistical modeling of multivariate spatial data. The classical assumption of symmetry of a multivariate covariance function is overlay restrictive and has been considered as unrealistic for most of real data applications. Despite of that, the literature on asymmetric covariance functions has been very sparse. In particular, there is some work related to asymmetric covariances on Euclidean spaces, depending on the Euclidean distance. However, for data collected over large portions of planet Earth, the most natural spatial domain is a sphere, with the corresponding geodesic distance being the natural metric. In this work, we propose a strategy based on spatial rotations to generate asymmetric covariances for multivariate random fields on the $d$-dimensional unit sphere. We illustrate through simulations as well as real data analysis that our proposal allows to achieve improvements in the predictive performance in comparison to the symmetric counterpart.
Ziziphora tenuior Linnaeus, 1753, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1753
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Lamiales
Lamiaceae
Ziziphora
Ziziphora tenuior

description: Ziziphora tenuior, spec. nov.
2. Ziziphora floribus lateralibus, foliis lanceolatis.
 Ziziphora foliis lanceolatis, floribus ex alis. Hort. cliff. 305.
 Ziziphora foliis lanceolatis, floribus lateralibus. Roy. lugdb. 313. Hort. ups.9.
 Acinos syriaca, folio mucronato, capsulis hirsutis. Moris. hist.3. p.404. s.11. t.19. f.3. 4.
 Habitat in Syria ? ☉
description: Published as part of Linnaeus, Carolus, 1753, Species plantarum: exhibentes plantas rite cognitas, ad genera relatas, cum differentiis specificis, nominibus trivialibus, synonymis selectis, locis natalibus, secundum systema sexuale digestas, Stockholm :Laurentius Salvius on page 21, DOI: 10.5281/zenodo.3931989
The Radius of the High-mass Pulsar PSR J0740+6620 with 3.6 yr of NICER Data
Creators: name: Salmi, Tuomo
name: Choudhury, Devarshi
name: Kini, Yves
name: Riley, Thomas E.
name: Vinciguerra, Serena
name: Watts, Anna L.
name: Wolff, Michael T.
name: Arzoumanian, Zaven
name: Bogdanov, Slavko
name: Chakrabarty, Deepto
name: Gendreau, Keith
name: Guillot, Sebastien
name: Ho, Wynn C. G.
name: Huppenkothen, Daniela
name: Ludlam, Renee M.
name: Morsink, Sharon M.
name: Ray, Paul S.
Publisher: name: arXiv
Year: 2024
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We report an updated analysis of the radius, mass, and heated surface regions of the massive pulsar PSR J0740+6620 using Neutron Star Interior Composition Explorer (NICER) data from 2018 September 21 to 2022 April 21, a substantial increase in data set size compared to previous analyses. Using a tight mass prior from radio timing measurements and jointly modeling the new NICER data with XMM-Newton data, the inferred equatorial radius and gravitational mass are $12.49_{-0.88}^{+1.28}$ km and $2.073_{-0.069}^{+0.069}$ $M_\odot$ respectively, each reported as the posterior credible interval bounded by the $16\,\%$ and $84\,\%$ quantiles, with an estimated systematic error $\lesssim 0.1$ km. This result was obtained using the best computationally feasible sampler settings providing a strong radius lower limit but a slightly more uncertain radius upper limit. The inferred radius interval is also close to the $R=12.76_{-1.02}^{+1.49}$ km obtained by Dittmann et al., when they require the radius to be less than $16$ km as we do. The results continue to disfavor very soft equations of state for dense matter, with $R<11.15$ km for this high-mass pulsar excluded at the $95\,\%$ probability. The results do not depend significantly on the assumed cross-calibration uncertainty between NICER and XMM-Newton. Using simulated data that resemble the actual observations, we also show that our pipeline is capable of recovering parameters for the inferred models reported in this paper.
description: 17 pages, 9 figures (2 of which are figure sets), 2 tables, published in ApJ
Pressure impact on the stability and distortion of the crystal structure of CeScO3
Creators: name: Errandonea, Daniel
name: Santamaria-Perez, David
name: Martinez-Garcia, Domingo
name: Gomis, Oscar
name: Shukla, Rakesh
name: Achary, S. Nagabhusan
name: Tyagi, Avesh K.
name: Popescu, Catalin
Publisher: name: arXiv
Year: 2017
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Other Condensed Matter (cond-mat.other)
subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: The effects of high pressure on the crystal structure of orthorhombic (Pnma) perovskite type cerium scandate have been studied in situ under high pressure by means of synchrotron x-ray powder diffraction, using a diamond anvil cell. We have found that the perovskite type crystal structure remains stable up to 40 GPa, the highest pressure reached in the experiments. The evolution of unit-cell parameters with pressure has indicated an anisotropic compression. The room-temperature pressure-volume equation of state is obtained from the experiments. From the evolution of microscopic structural parameters like bond distances and coordination polyhedra of cerium and scandium, the macroscopic behavior of CeScO3 under compression has been explained and reasoned for its large pressure stability. The reported results are discussed in comparison with high-pressure results from other perovskites.
description: 39 pages, 1 table, 9 figures
Second Order Power Spectrum and Nonlinear Evolution at High Redshift
Creators: name: Jain, Bhuvnesh
name: Bertschinger, Edmund
Publisher: name: arXiv
Year: 1993
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: The Eulerian cosmological fluid equations are used to study the nonlinear mode coupling of density fluctuations. We evaluate the second-order power spectrum including all four-point contributions. In the weakly nonlinear regime we find that the dominant nonlinear contribution for realistic cosmological spectra is made by the coupling of long-wave modes and is well estimated by second order perturbation theory. For a linear spectrum like that of the cold dark matter model, second order effects cause a significant enhancement of the high $k$ part of the spectrum and a slight suppression at low $k$ near the peak of the spectrum. Our perturbative results agree well in the quasilinear regime with the nonlinear spectrum from high-resolution N-body simulations. We find that due to the long-wave mode coupling, characteristic nonlinear masses grow less slowly in time (i.e., are larger at higher redshifts) than would be estimated using the linear power spectrum. For the cold dark matter model at $(1+z)=(20,10,5,2)$ the nonlinear mass is about $(180,8,2.5,1.6)$ times (respectively) larger than a linear extrapolation would indicate, if the condition rms $δρ/ρ=1$ is used to define the nonlinear scale. At high redshift the Press-Schechter mass distribution significantly underestimates the abundance of high-mass objects for the cold dark matter model. Although the quantitative results depend on the definition of the nonlinear scale, these basic consequences hold for any initial spectrum whose post-recombination spectral index $n$ decreases sufficiently rapidly with increasing $k$, a feature which arises quite generally during the transition from a radiation- to matter-dominated universe.
description: 25 pages, AAS Latex v3.0, figures and postscript available by anonymous ftp to arcturus.mit.edu, submittted to ApJ, preprint IAS-AST-93/70 and MIT-CSR-93-32
Monarda fistulosa Linnaeus, 1753, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1753
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Lamiales
Lamiaceae
Monarda
Monarda fistulosa

description: Monarda fistulosa, spec. nov.
 1. Monarda capitulis terminalibus, caule obtus-angulo. Hort. ups.12.
 Monarda floribus capitatis, caule obtuso. Vir. cliff. 3. Roy. lugdb. 313.
 Monarda. Hort. cliff. 11.
 Origanum fistulosum canadense. Corn. canad. 13. t.14.
 Habitat in Canada . ♃
description: Published as part of Linnaeus, Carolus, 1753, Species plantarum: exhibentes plantas rite cognitas, ad genera relatas, cum differentiis specificis, nominibus trivialibus, synonymis selectis, locis natalibus, secundum systema sexuale digestas, Stockholm :Laurentius Salvius on page 22, DOI: 10.5281/zenodo.3931989
Additional file 3 of Phylogenomics of palearctic Formica species suggests a single origin of temporary parasitism and gives insights to the evolutionary pathway toward slave-making behaviour
Creators: name: Romiguier, Jonathan
name: Rolland, Jonathan
name: Morandin, Claire
name: Keller, Laurent
Publisher: name: figshare
Year: 2018
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified

description: Figure S3 Phylogenetic tree of the GCPOOR supermatrix (647,706Â bp) built using RAxML (GTRâ +â GAMMA model, 500 bootstrap replications). (PDF 2 kb)
Skew-enriched categories
Creators: name: Campbell, Alexander
Publisher: name: arXiv
Year: 2017
Subjects: subject: Category Theory (math.CT)
subject: FOS: Mathematics
subject: 18D20, 18D10, 18D15

description: This paper introduces a skew variant of the notion of enriched category, suitable for enrichment over a skew-monoidal category, the main novelty of which is that the elements of the enriched hom-objects need not be in bijection with the morphisms of the underlying category. This is the natural setting in which to introduce the notion of locally weak comonad, which is fundamental to the theory of enriched algebraic weak factorisation systems. The equivalence, for a monoidal closed category $\mathcal{V}$, between tensored $\mathcal{V}$-categories and hommed $\mathcal{V}$-actegories is extended to the skew setting and easily proved by recognising both skew $\mathcal{V}$-categories and skew $\mathcal{V}$-actegories as equivalent to special kinds of skew $\mathcal{V}$-proactegory.
description: 16 pages; v2: minor edits, final version; published in Applied Categorical Structures
Discovery of Novel Silicon Allotropes with Optimized Band Gaps to Enhance Solar Cell Efficiency through Evolutionary Algorithms and Machine Learning
Creators: name: Yaghoobi, Mostafa
name: Alaei, Mojtaba
name: Shirazi, Mahtab
name: Rezaei, Nafise
name: de Gironcoli, Stefano
Publisher: name: arXiv
Year: 2024
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences

description: In the pursuit of advancing solar energy technologies, this study presents 20 direct and quasi-direct band gap silicon crystalline semiconductors that satisfy the Shockley-Queisser limit, a benchmark for solar cell efficiency. Employing two evolutionary algorithm-based searches, we optimize structures and calculate fitness function using the DFTB method and Gaussian approximation potential. Following the preselection of structures based on energy considerations, we further optimize them using PBEsol DFT. Subsequently, we screen the structures based on their band gap, employing a DFTB method tailored for band gap calculation of silicon crystals. To ensure accurate band gap determination, we employ HSE and GW methods. To validate the structural stability, we employ phonon analysis via linear regression algorithm applied to PBEsol DFT data. Significantly, the structures unveiled in this study are of great importance due to their proven stability from both mechanical and dynamic perspectives. Furthermore, the ductility and low density of certain structures enhance their potential application. We examine the optical properties by studying the imaginary part of the dielectric function by solving the Bethe-Salpeter Equation on top of GW approximation. By calculating the SLME, we achieve an efficiency of 32.7% for Si$_{22}$ at a thickness of 500 nm. Moreover, the study harnesses various machine learning algorithms to develop a predictive model for the band gap energy of these silicon structures. Input data for machine learning models are derived from structural MBTR and SOAP descriptors, as well as DFT outputs. Notably, the results reveal that features extracted from DFT outperform the MBTR and SOAP descriptors.
description: 14 pages, 8 figures, 5 tables
Spectral Properties of Blast Wave Models of Gamma-Ray Burst Sources
Creators: name: Meszaros, P.
name: Rees, M. J.
name: Papathanassiou, H.
Publisher: name: arXiv
Year: 1993
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We calculate the spectrum of blast wave models of gamma-ray burst sources, for various assumptions about the magnetic field density and the relativistic particle acceleration efficiency. For a range of physically plausible models we find that the radiation efficiency is high, and leads to nonthermal spectra with breaks at various energies comparable to those observed in the gamma-ray range. Radiation is also predicted at other wavebands, in particular at X-ray, optical/UV and GeV/TeV energies. We discuss the spectra as a function of duration for three basic types of models, and for cosmological, halo and galactic disk distances. We also evaluate the gamma-ray fluences and the spectral characteristics for a range of external densities. Impulsive burst models at cosmological distances can satisfy the conventional X-ray paucity constraint $S_x/S_γ\siml$ few percent over a wide range of durations, but galactic models can do so only for bursts shorter than a few seconds, unless additional assumptions are made. The emissivity is generally larger for bursts in a denser external environment, with the efficiency increasing up to the point where all the energy input is radiated away.
description: 24 pages of Tex, plus 17 figures uuencoded tar-compressed postscript files
title: Association between major cardiovascular events and esketamine: A pharmacovigilance study
Creators: name: Horowitz, Mark Abie
name: Naudet, Florian
name: Lepetit, Marianne
name: Montastruc, François
name: Moncrieff, Joanna
name: Soeiro, Thomas
name: Jullien, Adeline
name: Yrondi, Antoine
name: LAPORTALIERE, Tanguy TAILLEFER DE
Publisher: name: OSF Registries
Year: 2023
Subjects: subject: Psychiatric and Mental Health
subject: Medicine and Health Sciences
subject: Mental and Social Health

description: A case/non-case study which studies the risks of serious cardiovascular adverse events reported with esketamine in the global pharmacovigilance database.
Short-Range Correlations and Urca Process in Neutron Stars
Creators: name: Sedrakian, Armen
Publisher: name: arXiv
Year: 2024
Subjects: subject: Nuclear Theory (nucl-th)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: Recent measurements of high-momentum correlated neutron-proton pairs
 at JLab suggest that the dense nucleonic component of the compact
 stars contains a fraction of high-momentum neutron-proton pairs that
 is not accounted for in the familiar Fermi-liquid theory of the
 neutron-proton fluid mixture. We compute the rate of the Urca
 process in compact stars taking into account the non-Fermi liquid
 contributions to the proton's spectral widths induced by short-range
 correlations. The Urca rate differs strongly from the Fermi-liquid
 prediction at low temperatures, in particular, the high threshold on
 the proton fraction precluding the Urca process in neutron stars is
 replaced by a smooth increase with the proton fraction. This observation
 may have a profound impact on the theories of cooling of compact
 stars.
description: v3: added references and fixed typos. Matches the published version, 6 pages, 2 figures. v2: Typos fixed; v1: 5 pages, 2 figures
European Union Future for Western Balkans Countries (with special consideration of Serbia)
Creators: name: Schmale, Wolfgang
Publisher: name: University of Vienna. Faculty of Historical and Cultural Studies
Year: 2023
Subjects: European Union
European Union Future
Western Balkans
Serbia
Democracy
Society Model
Non-Discrimination
EU Enlargement Policy
Idea of Europe
Global History

description: This article explores the prospects and challenges of the Western Balkans countries in their journey towards European Union (EU) integration. The texts delve into the historical context, current state of affairs, and future possibilities for these countries within the framework of EU enlargement policy. Through comprehensive analysis, the author assesses the complex dynamics shaping the region‘s relationship with the EU and highlights key factors influencing the path towards accession. Issues such as political instability, economic development, and regional cooperation are scrutinized to provide insights into the evolving EU-Western Balkans dynamic.
Love Data Month: a Journey of Continuous Enhancement
Creators: name: Owen, Heather
name: Siddiqui, Sarah
Publisher: name: University of Rochester
Year: 2024
Subjects: classificationCode: 4605
subject: Data management and data science

description: This presentation material supports a workshop presented at the 2024 RIT & UR Staff Conference.Since 2022, the University of Rochester River Campus Libraries have been engaging in Love Data Month, extending Love Data Week as an opportunity for the Data Team to collaborate with other departments to provide rich data programming. Under the theme “My Kind of Data”, Love Data 2024 continued this tradition, focusing on social events and skills workshops, which have been popular in the past.Specifically, we hosted workshops on Metadata and Documentation, AI Ethics, ArcGIS, OpenRefine, and Excel, showed a documentary, orchestrated a faculty panel on DEIA research, held a data party, curated a book display on data and DEIA, and displayed data boards across numerous UR libraries. Despite the challenges, the month saw remarkable success with 320 registrations, 227 live attendees, and a 9.5/10 satisfaction score.In this lighting talk, we discussed our programming efforts, reflect on the challenges and successes, share ideas to make the program more sustainable in the future, and examine the impact of our events on participants and the broader community.
Bachelor's thesis
Creators: name: Ballabio, Matteo
Publisher: name: figshare
Year: 2024
Subjects: classificationCode: 320999
subject: Neurosciences not elsewhere classified

description: The first contribution of this thesis work was the development of a semi-automatic procedure for tissue segmentation in subjects with distorted brain anatomy.
The dataset, including T1-w images and related segmentations obtained with the developed procedure, constitutes a ground truth for the development and validation of supervised deep learning models (Benchmark in Neuroimaging with 3D-U-Net).
Additional file 1: of Dysregulation of chemokine receptor expression and function in leukocytes from ALS patients
Creators: name: Perner, Caroline
name: Perner, Florian
name: Stubendorff, Beatrice
name: Fรถrster, Martin
name: Witte, Otto
name: Heidel, Florian
name: Prell, Tino
name: Grosskreutz, Julian
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: ALS patient information and supplemental material and methods. (DOCX 97 kb)
Improved modularity and new features in ipie: Toward even larger AFQMC calculations on CPUs and GPUs at zero and finite temperatures
Creators: name: Jiang, Tong
name: Baumgarten, Moritz K. A.
name: Loos, Pierre-François
name: Mahajan, Ankit
name: Scemama, Anthony
name: Ung, Shu Fay
name: Zhang, Jinghong
name: Malone, Fionn D
name: Lee, Joonho
Publisher: name: arXiv
Year: 2024
Subjects: subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: ipie is a Python-based auxiliary-field quantum Monte Carlo (AFQMC) package that has undergone substantial improvements since its initial release [J. Chem. Theory Comput., 2023, 19(1): 109-121]. This paper outlines the improved modularity and new capabilities implemented in ipie. We highlight the ease of incorporating different trial and walker types and the seamless integration of ipie with external libraries. We enable distributed Hamiltonian simulations of large systems that otherwise would not fit on single CPU node or GPU card. This development enabled us to compute the interaction energy of a benzene dimer with 84 electrons and 1512 orbitals with multi-GPUs. Using CUDA and cupy for NVIDIA GPUs, ipie supports GPU-accelerated multi-slater determinant trial wavefunctions [arXiv:2406.08314] to enable efficient and highly accurate simulations of large-scale systems. This allows for near-exact ground state energies of multi-reference clusters, [Cu$_2$O$_2$]$^{2+}$ and [Fe$_2$S$_2$(SCH$_3$)$_4$]$^{2-}$. We also describe implementations of free projection AFQMC, finite temperature AFQMC, AFQMC for electron--phonon systems, and automatic differentiation in AFQMC for calculating physical properties. These advancements position ipie as a leading platform for AFQMC research in quantum chemistry, facilitating more complex and ambitious computational method development and their applications.
description: 18 pages, 13 figures
Excitation of open charm and factorization breaking in rapidity gap events at HERA
Creators: name: Genovese, M.
name: Nikolaev, N. N.
name: Zakharov, B. G.
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We develop the pQCD description of diffraction excitation of heavy flavours in DIS and we derive the analytic formulas for the mass spectrum in leading log$m_f^{2}$. The result illustrates nicely non-factorization properties of the QCD pomeron. We predict a very steep rise of the charm content of diffraction dissociation of photons at small $x_{\Pom}$. We evaluate the contribution of open charm to scaling violations in the structure function of the pomeron.
description: 13 pages. Accepted for publication on march 10th 1996 by Phys. Lett. B
On the Annihilator Ideal of an Inverse Form
Creators: name: Norton, Graham H.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Symbolic Computation (cs.SC)
subject: FOS: Computer and information sciences
subject: I.1

description: Let $K$ be a field. We simplify and extend work of Althaler \& Dür on finite sequences over $K$ by regarding $K[x^{-1},z^{-1}]$ as a $K[x,z]$ module, and studying forms in $K[x^{-1},z^{-1}]$ from first principles. Then we apply our results to finite sequences. First we define the annihilator ideal $I_F$ of a non-zero form $F\in K[x^{-1},z^{-1}]$, a homogeneous ideal. We inductively construct an ordered pair ($f_1$\,,\,$f_2$) of forms which generate $I_F$\,; our generators are special in that $z$ does not divide the leading grlex monomial of $f_1$ but $z$ divides $f_2$\,, and the sum of their total degrees is always $2-|F|$, where $|F|$ is the total degree of $F$. We show that $f_1,f_2$ is a maximal regular sequence for $I_F$, so that the height of $I_F$ is 2. The corresponding algorithm is $\sim |F|^2/2$. The row vector obtained by accumulating intermediate forms of the construction gives a minimal grlex Gröbner basis for $I_F$ for no extra computational cost other than storage and apply this to determining $\dim_K (K[x,z] /I_F)$\,. We show that either the form vector is reduced or a monomial of $f_1$ can be reduced by $f_2$\,. This enables us to efficiently construct the unique reduced Gröbner basis for $I_F$ from the vector extension of our algorithm. Then we specialise to the inverse form of a finite sequence, obtaining generator forms for its annihilator ideal and a corresponding algorithm which does not use the last 'length change' of Massey. We compute the intersection of two annihilator ideals using syzygies in $K[x,z]^5$. This improves a result of Althaler \& Dür. Finally, dehomogenisation induces a one-to-one correspondence ($f_1$\,,$f_2$) $\mapsto$ (minimal polynomial, auxiliary polynomial), the output of the author's variant of the Berlekamp-Massey algorithm. So we can also solve the LFSR synthesis problem via the corresponding algorithm for sequences.
description: We have improved the proof of the main construction, made minor improvements to the presentation and corrected some typos. We have also moved Subsection 4.5 on the maximal regular sequence to ArXiv 1805.03995
Non-Geometric Vacua of the $\mathbf{\text{Spin}(32)/\mathbb Z_2}$ Heterotic String and Little String Theories
Creators: name: Font, Anamaría
name: Mayrhofer, Christoph
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We study a class of 6d $\mathcal{N}=(1,0)$ non-geometric vacua of the $\text{Spin}(32)/\mathbb Z_2$ heterotic string which can be understood as fibrations of genus-two curves over a complex one-dimensional base. The 6d $\mathcal{N}=(1,0)$ theories living on the defects that arise when the genus-two fiber degenerates at a point of the base are analyzed by dualizing to F-theory on elliptic K3-fibered non-compact Calabi-Yau threefolds. We consider all possible degenerations of genus-two curves and systematically attempt to resolve the singularities of the dual threefolds. As in the analogous non-geometric vacua of the $E_8\times E_8$ heterotic string, we find that many of the resulting dual threefolds contain singularities which do not admit a crepant resolution. When the singularities can be resolved crepantly, we determine the emerging effective theories which turn out to be little string theories at a generic point on their tensor branch. We also observe a form of duality in which theories living on distinct defects are the same.
description: 39 pages, 3 figures, and 6 tables
Efficient Bayesian inference and model selection for continuous gravitational waves in pulsar timing array data
Creators: name: Bécsy, Bence
Publisher: name: arXiv
Year: 2024
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: Finding and characterizing gravitational waves from individual supermassive black hole binaries is a central goal of pulsar timing array experiments, which will require analysis methods that can be efficient on our rapidly growing datasets. Here we present a novel approach built on three key elements: i) precalculating and interpolating expensive matrix operations; ii) semi-analytically marginalizing over the gravitational-wave phase at the pulsars; iii) numerically marginalizing over the pulsar distance uncertainties. With these improvements the recent NANOGrav 15yr dataset can be analyzed in minutes after an $\mathcal{O}(1\ \mathrm{hour})$ setup phase, instead of an analysis taking days-weeks with previous methods. The same setup can be used to efficiently analyze the dataset under any sinusoidal deterministic model. In particular, this will aid testing the binary hypothesis by allowing for efficient analysis of competing models (e.g. incoherent, monopolar, or dipolar sine wave model) and scrambled datasets for false alarm studies. The same setup can be updated in minutes for new realizations of the data, which enables large simulation studies.
description: 19 pages, 3 figures, version matching published paper
A counterexample to gluing theorems for MCP metric measure spaces
Creators: name: Rizzi, Luca
Publisher: name: arXiv
Year: 2017
Subjects: subject: Metric Geometry (math.MG)
subject: Differential Geometry (math.DG)
subject: FOS: Mathematics
subject: 53C17, 54E45, 54E50

description: Perelman's doubling theorem asserts that the metric space obtained by gluing along their boundaries two copies of an Alexandrov space with curvature $\geq κ$ is an Alexandrov space with the same dimension and satisfying the same curvature lower bound. We show that this result cannot be extended to metric measure spaces satisfying synthetic Ricci curvature bounds in the $\mathrm{MCP}$ sense. The counterexample is given by the Grushin half-plane, which satisfies the $\mathrm{MCP}(0,N)$ if and only if $N\geq 4$, while its double satisfies the $\mathrm{MCP}(0,N)$ if and only if $N\geq 5$.
description: 10 pages, 2 figures. Accepted version, to appear on the Bulletin of the London Mathematical Society
MPEC 2024-D130 : 2017 BJ229
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2024
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469
subject: 2017 BJ229

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
Impurity self-energy in the strongly-correlated Bose systems
Creators: name: Panochko, Galyna
name: Pastukhov, Volodymyr
name: Vakarchuk, Ivan
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: FOS: Physical sciences

description: We proposed the non-perturbative scheme for calculation of the impurity spectrum in the Bose system at zero temperature. The method is based on the path-integral formulation and describes an impurity as a zero-density ideal Fermi gas interacting with Bose system for which the action is written in terms of density fluctuations. On the example of the $^3$He atom immersed in the liquid helium-4 a good consistency with experimental data and results of Monte Carlo simulations is shown.
description: 5 pages, 4 figures
Amplitude of Primeval Fluctuations from Cosmological Mass Density Reconstructions
Creators: name: Seljak, Uros
name: Bertschinger, Edmund
Publisher: name: arXiv
Year: 1993
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We use the POTENT reconstruction of the mass density field in the nearby universe to estimate the amplitude of the density fluctuation power spectrum for various cosmological models. We find sigma_8Ω_m^{0.6}= 1.3^{+0.4}_{-0.3}, almost independently of the power spectrum. This value agrees well with the COBE normalization for the standard CDM model, while some alternative models predict an excessive amplitude compared with COBE. Flat low Ω_m models and tilted models with spectral index n<0.8 are particularly discordant.
description: 10 pages, AAS Latex v3.0, 1 figure and postscript available by anonymous ftp to arcturus.mit.edu, ApJ, in press 1994, preprint MIT-CSR-93-33
Additional file 2 of Phylogenomics of palearctic Formica species suggests a single origin of temporary parasitism and gives insights to the evolutionary pathway toward slave-making behaviour
Creators: name: Romiguier, Jonathan
name: Rolland, Jonathan
name: Morandin, Claire
name: Keller, Laurent
Publisher: name: figshare
Year: 2018
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified

description: Figure S2 Phylogenetic tree of the GAPLESS supermatrix (621,307Â bp) built using RAxML (GTRÂ +Â GAMMA model, 500 bootstrap replications). (PDF 2 kb)