cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Phengaris teleius
Creators: name: Aistleitner, Eyjolf
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Lycaenidae
Phengaris
Phengaris teleius

description: Phengaris teleius (HIRSCHKE, 1904)
 B e l e g e: Austria, Steiermark, Grazer Bergland, Graz, Umgebung, 10.7.1928, leg. Anonymus. - Oberes Murtal, Judenburg Umgebung, 14.7.1938; leg. Meier. Vorarlberg, Rheintal, Koblach-Dürne, Schmidsfeld, 430 m, 28.6.2006, 1♂, 5.+ 6.6.2009, 2♂♂ 1♀ und Zwölfermahd, 20.7.09, 1♂ 2♀♀; Lustenau, Gsieg, 410 m, 1.8.1993, 1♀; Übersaxen, Weiherberg, 1050 m, 25.6.1999, 1♂; leg. /vid. Aistleitner.
V e r b r e i t u n g: Chorotyp eurasiatisch; Europa, von den Pyrenaeen bis zum Ural, Zentralasien (Kasachstan), S-Sibirien (W Baikalsee) bis zum Amur, Mongolei, N-China, Korea und Japan.
description: Published as part of Aistleitner, Eyjolf, 2021, Zur Chorologie und Faunistik der Tagfalter in den Ost- und Südalpen 1. Tagfalter (Papilionoidea) aus der Sammlung von Herbert Meier † sowie Daten aus den Sammlungen des Entomologischen Forschungsmuseums EFMEA in Feldkirch, pp. 787-867 in Linzer biologische Beiträge 52 (2) on page 812, DOI: 10.5281/zenodo.10086880
Additional file 1 of Astrocytes in CA1 modulate schema establishment in the hippocampal-cortical neuron network
Creators: name: Liu, Shu
name: Wong, Heung Yan
name: Xie, Li
name: Iqbal, Zafar
name: Lei, Zhuogui
name: Fu, Zhongqi
name: Lam, Yuk Yan
name: Ramkrishnan, Aruna Surendran
name: Li, Ying
Publisher: name: figshare
Year: 2022
Subjects: subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Additional file 1: Fig S1. Calcium signals distribution during the trials of PA training. (A) Representative Ca2+ transient during one trial in PA training; Ca2+ signals’ peak present to seeking and get rewarding behaviors, and be flatten at digging behavior. (B) Probability distribution of averaged Z-score of Ca2+ signals in seeking + get rewarding behaviors and digging behavior for normal rats in session 1 (n=4, trials=16).
Unconventional Josephson Effect in Hybrid Superconductor-Topological Insulator Devices
Creators: name: Williams, J. R.
name: Bestwick, A. J.
name: Gallagher, P.
name: Hong, Seung Sae
name: Cui, Y.
name: Bleich, Andrew S.
name: Analytis, J. G.
name: Fisher, I. R.
name: Goldhaber-Gordon, D.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: We report on transport properties of Josephson junctions in hybrid superconducting-topological insulator devices, which show two striking departures from the common Josephson junction behavior: a characteristic energy that scales inversely with the width of the junction, and a low characteristic magnetic field for suppressing supercurrent. To explain these effects, we propose a phenomenological model which expands on the existing theory for topological insulator Josephson junctions.
Xyroa Britton 1987
Creators: name: Allsopp, Peter G.
name: Schoolmeesters, Paul
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Scarabaeidae
Xyroa

description: Xyroa Britton, 1987a
[4 species].
Type species Xyroa polita Britton, 1987, by original designation.
description: Published as part of Allsopp, Peter G. & Schoolmeesters, Paul, 2024, All genera of the world: Subfamilies Prototroginae, Cretoscarabaeinae, Dynamopodinae, Electrorubesopsinae, Phaenomeridinae, Orphninae, Allidiostomatinae, Aclopinae, Lichniinae, Melolonthinae, Oncerinae, Podolasiinae, Sericinae, Sericoidinae (Animalia: Arthropoda: Insecta: Coleoptera: Scarabaeidae), pp. 104-175 in Megataxa 12 (1) on page 152, DOI: 10.11646/megataxa.12.1.2, http://zenodo.org/record/14984437
Attrezzature religiose e pianificazione urbanistica: luci ed ombre
Creators: name: Bolgiani, Isabella
Publisher: name: Università degli Studi di Milano
Year: 2013
Subjects: Edifici di culto

description: Contributo sottoposto a valutazione
SOMMARIO: 1. Premessa - 2. Le origini del concetto di attrezzatura religiosa - 3. Le previsioni regionali in materia e la loro successiva evoluzione - 4. Le problematiche aperte - 5. Alcuni risvolti pratici: le innovazioni di evidente impatto urbanistico in assenza di un previo esame ad opera della amministrazione comunale - 6. Osservazioni conclusive e possibili prospettive de iure condendo.
Religious facilities and urban planning: lights and shadows

Abstract

 In Italy many places of worship avoid the scope of planning regulations. This situation, especially for the places of Islamic worship (musalla), sometimes arises from the suspicion of local authorities to grant adequate space for the realization of these places; it sometimes arises also from the choice of the religious confessions. Therefore we face a difficult situation: you must guarantee the right to the free exercise of worship of the faithful in the area and at the same time you must comply with the provisions relating to urban planning, to protect other community needs, such as security or public order of the places.

Keywords
Religious confession, Church, Religious freedom, Planning law
description: Stato, Chiese e pluralismo confessionale, 2013: 23 settembre
Interspecific competition underlying mutualistic networks
Creators: name: Maeng, Seong Eun
name: Lee, Jae Woo
name: Lee, Deok-Sun
Publisher: name: arXiv
Year: 2011
Subjects: subject: Populations and Evolution (q-bio.PE)
subject: Social and Information Networks (cs.SI)
subject: Physics and Society (physics.soc-ph)
subject: FOS: Biological sciences
subject: FOS: Computer and information sciences
subject: FOS: Physical sciences

description: The architecture of bipartite networks linking two classes of constituents is affected by the interactions within each class. For the bipartite networks representing the mutualistic relationship between pollinating animals and plants, it has been known that their degree distributions are broad but often deviate from power-law form, more significantly for plants than animals. Here we consider a model for the evolution of the mutualistic networks and find that their topology is strongly dependent on the asymmetry and non-linearity of the preferential selection of mutualistic partners. Real-world mutualistic networks analyzed in the framework of the model show that a new animal species determines its partners not only by their attractiveness but also as a result of the competition with pre-existing animals, which leads to the stretched-exponential degree distributions of plant species.
description: 5 pages, 3 figures, accepted version in PRL
Search on the Brink of Chaos
Creators: name: Baryshnikov, Yuliy
name: Zharnitsky, Vadim
Publisher: name: arXiv
Year: 2011
Subjects: subject: Classical Analysis and ODEs (math.CA)
subject: Data Structures and Algorithms (cs.DS)
subject: Dynamical Systems (math.DS)
subject: Optimization and Control (math.OC)
subject: FOS: Mathematics
subject: FOS: Computer and information sciences

description: The classical linear search problem is studied from the view point of Hamiltonian dynamics. For the specific, yet representative case of exponentially distributed position of the hidden object, we show that the optimal plan follows an unstable separatrix which is present in the associated Hamiltonian system.
description: 27 pages, 8 figures
Absence of bound states for waveguides in 2D periodic structures
Creators: name: Hoang, Vu
name: Radosz, Maria
Publisher: name: arXiv
Year: 2011
Subjects: subject: Spectral Theory (math.SP)
subject: Mathematical Physics (math-ph)
subject: FOS: Mathematics
subject: FOS: Physical sciences
subject: 35J15, 15P99, 35Q60

description: We study a Helmholtz-type spectral problem in a two-dimensional medium consisting of a fully periodic background structure and a perturbation in form of a line defect. The defect is aligned along one of the coordinate axes, periodic in that direction (with the same periodicity as the background), and bounded in the other direction. This setting models a so-called "soft-wall" waveguide problem. We show that there are no bound states, i.e., the spectrum of the operator under study contains no point spectrum.
description: This is an updated version of our paper (in slightly different form in Journal of Mathematical Physics). An anonymous reviewer kindly made us aware that ref. 10 is not applicable in our situation. An application of the theorem in ref. 10 would have proved the absence of singular continuous spectrum also. Our result on the absence of point spectrum is not affected by this
Additional file 2 of Carcinogen-induced DNA structural distortion differences in the RAS gene isoforms; the importance of local sequence
Creators: name: Menzies, Georgina E.
name: Prior, Ian A.
name: Brancale, Andrea
name: Reed, Simon H.
name: Lewis, Paul D.
Publisher: name: figshare
Year: 2021
Subjects: subject: Biophysics
subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 2: Table S1. RAS DNA sequences used for molecular dynamics simulations (adducted guanines in yellow). Figure 1. schematic of the Benzo-a-pyrene Diol Epoxide structure. Figure 2. Most common structures from each simulation, found through the gromacs cluster command. A-K13mS B-H12S C-H13S D-N12S. Figure S3. RMSF per residue for each of the sequences. Figure S4. Zoomed in K12 BPDE T5 positioning
Deployment of wireless sensor and actuator networks for precision agriculture
Creators: name: Sivertsen, Kyle N.
Publisher: name: University of British Columbia
Year: 2013

description: Wireless sensor and actuator networks (WSAN) are emerging as a key enabling technology for precision agriculture, a technique for maximizing crop yield and quality through targeted application of resources such as water, fertilizer and pest control agents by exploiting temporal and spatial variability in crop and soil conditions. In this thesis, we make three contributions to the field. First, we assess the state of the art in deployment and configuration of wireless sensor and actuator networks for precision agriculture, including the relevance and suitability of existing propagation models, lessons learned from previous demonstrations and field trials, and the potential for improving network performance through suitable deployment strategies, and physical, medium access control (MAC) and network layer design. We reveal an urgent need to assess airlink design of such networks to account for the unique nature of the wireless propagation environment and to consolidate proposed improvements to and best practices for WSAN design in the form of an industry standard. Second, we show that the conventional practice of employing wireless transceivers that operate at 800 MHz or above incurs significant penalties for achievable range and/or power consumption and propose that low-power short-range wireless devices intended for use as sensor nodes in precision agriculture be allowed to share the 433 MHz sub-band currently authorized for use by active radio frequency identification (RFID) devices at cargo terminals, port facilities and warehouses so that they may experience less path loss and achieve greater range and reliability while consuming less power. Finally, we analyze 2450 MHz channel impulse responses that we measured in a high-density apple orchard and consider the implications of both their form and scale for the design and deployment of WSANs and our understanding of the propagation environment. Of particular note is the vastly reduced delay spread compared to that observed in traditional residential, commercial and industrial environments
Additional file 2 of Astrocytes in CA1 modulate schema establishment in the hippocampal-cortical neuron network
Creators: name: Liu, Shu
name: Wong, Heung Yan
name: Xie, Li
name: Iqbal, Zafar
name: Lei, Zhuogui
name: Fu, Zhongqi
name: Lam, Yuk Yan
name: Ramkrishnan, Aruna Surendran
name: Li, Ying
Publisher: name: figshare
Year: 2022
Subjects: subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Additional file 2: Fig S2. Comparison of c-Fos expression between home-cage and other sessions. (A) Representative images of hM4Di in astrocytes (red), EYFP in ACC projecting CA1 neurons (green) and c-Fos (magenta) in the CA1 of Saline-injected home-cage rats (A) or CNO-injected home-cage rats (C); white neurons that arrows point to are overlap of EYFP and c-Fos; scale bar, 20 µm. (B) Comparison of c-Fos expression level in CA1 between home-cage and sessions 1, 10, 18, NPA. (D) Comparison of the percent of CA1 cells projecting into the ACC that express c-Fos between home-cage and sessions 1, 10, 18, NPA. (E, F) Comparison of c-Fos expression level in ACC between home-cage and sessions 1, 10, 18, NPA. (G) The scheme of microdialysis probe insert and perfusion in CA1 and ACC. Data are presented as the mean ± SEM, *p<0.05, **p<0.01, ***p<0.001; #p<0.05, ##p<0.01.
Conformal couplings of a scalar field to higher curvature terms
Creators: name: Oliva, Julio
name: Ray, Sourya
Publisher: name: arXiv
Year: 2011
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We present a simple way of constructing conformal couplings of a scalar field to higher order Euler densities. This is done by constructing a four-rank tensor involving the curvature and derivatives of the field, which transforms covariantly under local Weyl rescalings. The equation of motion for the field, as well as its energy momentum tensor are shown to be of second order. The field equations for the spherically symmetric ansatz are integrated, and for generic non-homogeneous couplings, the solution is given in terms of a polynomial equation, in close analogy with Lovelock theories.
description: 9 pages, no figures. Based on a talk given by one of the authors at Centro de Estudios Cientificos, Valdivia, Chile, on June 22, 2011. V2: 11 pages, no figures. Typos fixed, appendices and references added. v3: to appear in CQG
Xyrodes Britton 1987
Creators: name: Allsopp, Peter G.
name: Schoolmeesters, Paul
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Scarabaeidae
Xyrodes

description: Xyrodes Britton, 1987a
[1 species].
Type species Frenchella calorata Blackburn, 1907, by original designation.
description: Published as part of Allsopp, Peter G. & Schoolmeesters, Paul, 2024, All genera of the world: Subfamilies Prototroginae, Cretoscarabaeinae, Dynamopodinae, Electrorubesopsinae, Phaenomeridinae, Orphninae, Allidiostomatinae, Aclopinae, Lichniinae, Melolonthinae, Oncerinae, Podolasiinae, Sericinae, Sericoidinae (Animalia: Arthropoda: Insecta: Coleoptera: Scarabaeidae), pp. 104-175 in Megataxa 12 (1) on page 152, DOI: 10.11646/megataxa.12.1.2, http://zenodo.org/record/14984437
Additional file 1 of Acid resistance system CadBA is implicated in acid tolerance and biofilm formation and is identified as a new virulence factor of Edwardsiella tarda
Creators: name: Du, Chunmei
name: Huo, Xiaoping
name: Gu, Hanjie
name: Wu, Dongmei
name: Hu, Yonghua
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 1. Sequence alignment of CadA (A) and CadB (B) homologues. Gaps used to maximize the alignment are indicated by dots. The complete conserved amino acid residues are shown in dark blue. The amino acid residues with conservative degree higher than 75% are shown in pink. The black line indicates the N-terminal domain. The green and orange lines indicate the PLP-binding core domain and C-terminal domain, respectively. Red triangles indicate PLP binding sites. Conserve PLP binding motif is yellow boxed. The blue line indicates transmembrane (TM) domains. The GenBank accession numbers of CadA homologues are as follows: Edwardsiella tarda, ACY83602.1; Escherichia coli str. K-12 substr, NP_418555.1; Salamae, VEA01344.1; Aeromonas veronii, QHC07268.1; Vibrio cholerae, WP_188372281.1; Klebsiella pneumoniae, AZH95435.1; Shigella boydii, PHU85906.1. The GenBank accession numbers of CadB homologues are as follows: E. tarda, ACY83601.1; Salmonella enterica, WP_000100010.1; Klebsiella pneumoniae, WP_110924908.1; Escherichia coli, WP_175119720.1; Shigella flexneri, NP_709997.1; Vibrio cholerae, WP_189017881.1; Aeromonas veronii, WP_118881724.1.
Extraction of naphthenic acid from highly acidic oil using phenolate based ionic liquids
Creators: name: Syed Nasir Shah, Lethesh Kallidanthiyi Chellappan Girma Gonfa
Publisher: name: National Academic Digital Repository of Ethiopia
Year: 2015

description: In this study, N-alkyl imidazolium ionic liquids with highly alkaline phenolate anions were used for the removal of naphthenic acid from model acid oil. The effect of alkyl spacer length on the deacidification process was evaluated by attaching butyl, hexyl, octyl, decyl and dodecyl groups on imidazolium cation. It was found that increase in the alkyl chain length increases the percent naphthenic acid removal. Extremely low amount of ionic liquids were necessary for the complete deacidification of model oil with high TAN. The reusability of the phenolate ionic liquids was also investigated. COSMO-RS calculations were performed on phenolate ionic liquids to study their extraction efficiency, selectivity and solvent capacity.
Fascin − F-actin interaction studied by molecular dynamics simulation and protein network analysis
Creators: name: Wu, Xiaodong
name: Li, Dajia
name: Chen, Yang
name: Wang, Liangdong
name: Xu, Li-Yan
name: Li, En-Min
name: Dong, Geng
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Biophysics
subject: Biochemistry
subject: Physical Sciences not elsewhere classified
subject: Cell Biology
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Actin bundles are an important component of cellular cytoskeleton and participate in the movement of cells. The formation of actin bundles requires the participation of many actin binding proteins (ABPs). Fascin is a member of ABPs, which plays a key role in bundling filamentous actin (F-actin) to bundles. However, the detailed interactions between fascin and F-actin are unclear. In this study, we construct an atomic-level structure of fascin − F-actin complex based on a rather poor cryo-EM data with resolution of 20 nm. We first optimized the geometries of the complex by molecular dynamics (MD) simulation and analyzed the binding site and pose of fascin which bundles two F-actin chains. Next, binding free energy of fascin was calculated by MM/GBSA method. Finally, protein structure network analysis (PSNs) was performed to analyze the key residues for fascin binding. Our results show that residues of K22, E27, E29, K41, K43, R110, R149, K358, R408 and K471 on fascin are important for its bundling, which are in good agreement with the experimental data. On the other hand, the consistent results indicate that the atomic-level model of fascin − F-actin complex is reliable. In short, this model can be used to understand the detailed interactions between fascin and F-actin, and to develop novel potential drugs targeting fascin. Communicated by Ramaswamy H. Sarma
Phengaris nausithous
Creators: name: Aistleitner, Eyjolf
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Lycaenidae
Phengaris
Phengaris nausithous

description: Phengaris nausithous (BERGSTRÄSSER, 1779)
 B e l e g e: Austria, Steiermark, Grazer Bergland, Graz, Umgebung, 24.7.1929 und Graz, Thal, 19.5.1918, leg. Anonymus. - Oberes Murtal, Judenburg, Reiterbach, 15.7.1938.- Oststeiermark, Weiz, 17.7.1930, leg. Anonymus. Vorarlberg, Rheintal, Koblach-Dürne, Schmidsfeld, 430 m, 12.7.2006, 10.6.2009, 20.7.2009, 1♀; Koblach-Bromen, Höller, 18.6.2009; Lustenau, Gsieg / Obere Mähder, 20.7.+ 16.8.1993, leg. /vid. Aistleitner.
V e r b r e i t u n g: Chorotypeurosibirisch;Europa,lokal, von den Pyrenaeen bis zum Ural, Kaukasusregion, Vorderasien (Türkei), Zentralasien (Kasachstan), SW-Sibirien.
description: Published as part of Aistleitner, Eyjolf, 2021, Zur Chorologie und Faunistik der Tagfalter in den Ost- und Südalpen 1. Tagfalter (Papilionoidea) aus der Sammlung von Herbert Meier † sowie Daten aus den Sammlungen des Entomologischen Forschungsmuseums EFMEA in Feldkirch, pp. 787-867 in Linzer biologische Beiträge 52 (2) on page 812, DOI: 10.5281/zenodo.10086880
Unresectable Pancreatic Ductal Adenocarcinoma in the Remnant Pancreas Diagnosed during Every-6-Month Surveillance after Resection of Branch Duct Intraductal Papillary Mucinous Neoplasm: A Case Report
Creators: name: Tamura, Koji
name: Ohtsuka, Takao
name: Ideno, Noboru
name: Aso, Teppei
name: Kono, Hiroshi
name: Nagayoshi, Yousuke
name: Shindo, Koji
name: Ushijima, Yasuhiro
name: Ueda, Junji
name: Takahata, Shunichi
name: Ito, Tetsuhide
name: Oda, Yoshinao
name: Mizumoto, Kazuhiro
name: Tanaka, Masao
Publisher: name: JOP. Journal of the Pancreas
Year: 2013
Subjects: Carcinoma, Pancreatic Ductal; GNAS protein, human; Neoplasms, Cystic, Mucinous, and Serous; Recurrence

description: Context There are few studies regarding the surveillance period and interval of resected or observed branch duct intraductal papillary mucinous neoplasms (IPMNs) of the pancreas in terms of early detection of concomitant pancreatic ductal adenocarcinoma. Despite a strict surveillance protocol, some patients are diagnosed with metastatic distinct ductal adenocarcinoma after resection of IPMN. Case report We herein report a patient with unresectable pancreatic ductal adenocarcinoma that developed in the remnant pancreas 18 months after resection of branch duct IPMN. Although the patient was surveyed every 6 months after the operation and imaging studies at 6 and 12 months postoperatively demonstrated no evidence of recurrence, invasive ductal adenocarcinoma with liver metastasis appeared 18 months after the operation. The patient subsequently underwent chemotherapy; however, he died 9 months after the diagnosis of metachronous pancreatic ductal adenocarcinoma. Conclusions In some patients with branch duct IPMNs, 6-month surveillance seems to be insufficient to detect resectable concomitant pancreatic ductal adenocarcinoma. Therefore, identification of high-risk patients who require surveillance at shorter intervals is urgently needed.
description: JOP. Journal of the Pancreas, Vol 14, N° 4 (2013): July - p. 304-474
A Proteomic Comparison of Formalin-Fixed Paraffin-Embedded Pancreatic Tissue from Autoimmune Pancreatitis, Chronic Pancreatitis, and Pancreatic Cancer
Creators: name: Paulo, Joao A
name: Kadiyala, Vivek
name: Brizard, Scott
name: Banks, Peter A
name: Steen, Hanno
name: Conwell, Darwin L
Publisher: name: JOP. Journal of the Pancreas
Year: 2013
Subjects: Autoimmune Diseases; Biological Markers; Pancreas; Pancreatic Neoplasms; Pancreatitis, Chronic

description: Content Formalin-fixed paraffin-embedded (FFPE) tissue is a standard for specimen preservation, and as such FFPE tissue banks are an untapped resource of histologically-characterized specimens for retrospective biomarker investigation for pancreatic disease. Objectives We use liquid chromatography coupled with tandem mass spectrometry (LC-MS/MS) to compare FFPE specimens from three different diseases of the exocrine pancreas. Design We investigated the proteomic profile of FFPE pancreatic tissue from 9 archived specimens that were histologically classified as: autoimmune pancreatitis (n=3), chronic pancreatitis (n=3), and pancreatic cancer (n=3), using LC-MS/MS. Setting This is a proteomic analysis experiment of FFPE pancreatic tissue in an academic center. Patients FFPE tissue specimens were provided by Dana-Farber/Harvard Cancer Center (Boston, MA, USA). Interventions FFPE tissue specimens were collected via routine surgical resection procedures. Main outcome measures We compared proteins identified from chronic pancreatitis, autoimmune pancreatitis, and pancreatic cancer FFPE pancreatic tissue. Results We identified 386 non-redundant proteins from 9 specimens. Following our filtering criteria, 73, 29, and 53 proteins were identified exclusively in autoimmune pancreatitis, chronic pancreatitis, and pancreatic cancer specimens, respectively. Conclusions We report that differentially-expressed proteins can be identified among FFPE tissues specimens originating from individuals with different histological diagnoses. These proteins merit further confirmation with a greater number of specimens and orthogonal validation, such as immunohistochemistry. The mass spectrometry-based methodology used herein has the potential to enhance diagnostic biomarker and therapeutic target discovery, further advancing pancreatic research.
description: JOP. Journal of the Pancreas, Vol 14, N° 4 (2013): July - p. 304-474
Additional file 2 of Acid resistance system CadBA is implicated in acid tolerance and biofilm formation and is identified as a new virulence factor of Edwardsiella tarda
Creators: name: Du, Chunmei
name: Huo, Xiaoping
name: Gu, Hanjie
name: Wu, Dongmei
name: Hu, Yonghua
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 2. Validation of TX01 mutants by PCR amplification. Lanes 1 and 7 were the 661-bp (deletion of cadA allele) fragments amplified from TX01ΔcadA and TX01ΔcadBA genomic DNA with primers CadAKOF3/CadAKOR3, respectively. Lane 4 was 1684-bp cadA fragment. Lanes 5 and 8 were the 265 bp (deletion of cadB allele) fragments amplified from TX01ΔcadB and TX01ΔcadBA genomic DNA with primers CadBKOF3/CadBKOR3, respectively. Lane 2 was 901-bp cadB fragment. Lanes 3, 6 and 9 were 16S rRNA gene fragments amplified from three mutants with universal primers 27F/1492R. M is DS 2000 marker.
Atypical BCS-BEC crossover induced by quantum-size effects
Creators: name: Shanenko, A. A.
name: Croitoru, M. D.
name: Vagov, A. V.
name: Axt, V. M.
name: Perali, A.
name: Peeters, F. M.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: Quantum-size oscillations of the basic physical characteristics of a confined fermionic condensate are a well-known phenomenon. Its conventional understanding is based on the single-particle physics, whereby the oscillations follow the size-dependent changes in the single-particle density of states. Here we present a study of a cigar-shaped ultracold superfluid Fermi gas, which demonstrates an important many-body aspect of the quantum-size effects, overlooked previously. The many-body physics is revealed in the atypical crossover from the Bardeen-Cooper-Schrieffer (BCS) superfluid to the Bose-Einstein condensate (BEC) induced by the size quantization of the particle motion. Quantized perpendicular spectrum results in the formation of single-particle subbands (shells) so that the aggregate fermionic condensate becomes a coherent mixture of subband condensates. Each time when the lower edge of a subband crosses the chemical potential, the BCS-BEC crossover is approached in this subband, and the aggregate condensate contains both the BCS and BEC-like components.
description: 7 pages, 5 figures
A Rare Congenital Anomaly of the Pancreas: A Cadaveric Case Report
Creators: name: Sirasanagandla, Srinivasa Rao
name: Nayak, Satheesha B
name: Bhat, Kumar M R
Publisher: name: JOP. Journal of the Pancreas
Year: 2013
Subjects: Annular pancreas; Celiac Artery; Duodenum; Endocrine Glands; Growth and Development

description: Context The pancreas is formed by ventral and dorsal pancreatic buds which arise from the endodermal lining of the gut. When the duodenum rotates to the right, the ventral pancreatic bud migrates dorsally and finally come and lie below the dorsal pancreatic bud. The developmental errors in the rotation of these components lead to annular pancreas. Case report We report a rare type of the incomplete annular pancreas around the contents of right free margin of lesser omentum. There was an extra pancreatic mass situated horizontally immediately above the superior border of the pancreas, situated behind the lesser omentum. The right end of this mass extended into the epiploic foramen and incompletely encircled the portal vein, bile duct and hepatic artery proper from behind. The left end of the extra pancreatic mass was extended towards the lesser curvature of the stomach. Further, this mass completely surrounded the origin of three branches of the celiac trunk. Its right end was found to be continuous with the head of the pancreas, close to the pylorus. Histology of the extra pancreatic mass revealed the presence of normal pancreatic tissue. Conclusion preoperative diagnosis of this rare anomaly is of clinical importance during surgeries involving the contents of right free margin of lesser omentum and epiploic foramen.
description: JOP. Journal of the Pancreas, Vol 14, N° 4 (2013): July - p. 304-474
Apterodemidea Gutierrez 1952
Creators: name: Allsopp, Peter G.
name: Schoolmeesters, Paul
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Scarabaeidae
Apterodemidea

description: Apterodemidea Gutiérrez, 1952
[1 species].
Type species Apterodema paraguayensis Arrow, 1903, by original designation.
description: Published as part of Allsopp, Peter G. & Schoolmeesters, Paul, 2024, All genera of the world: Subfamilies Prototroginae, Cretoscarabaeinae, Dynamopodinae, Electrorubesopsinae, Phaenomeridinae, Orphninae, Allidiostomatinae, Aclopinae, Lichniinae, Melolonthinae, Oncerinae, Podolasiinae, Sericinae, Sericoidinae (Animalia: Arthropoda: Insecta: Coleoptera: Scarabaeidae), pp. 104-175 in Megataxa 12 (1) on page 152, DOI: 10.11646/megataxa.12.1.2, http://zenodo.org/record/14984437
Collision Tumors: Pancreatic Adenocarcinoma and Mantle Cell Lymphoma
Creators: name: Dasanu, Constantin A
name: Shimanovsky, Alexei
name: Rotundo, Edyta K
name: Posteraro, Anthony F
name: Cooper, Dennis L
name: Atienza, Jonessa A
Publisher: name: JOP. Journal of the Pancreas
Year: 2013
Subjects: collision tumors; pancreatic adenocarcinoma; mantle cell lymphoma; cyclin D1

description: Context Collision tumors are very rare entities composed of two or more distinct tumor components, each separated by normal tissue. Perhaps due to technical advances in the last decade, the incidence of collision tumors has been on the rise. To the best of our knowledge, collision tumors featuring mantle cell lymphoma and pancreatic adenocarcinoma have not been previously described in the scientific literature. Case report For the first time, we describe herein the clinical course of a collision tumor between pancreatic adenocarcinoma and mantle cell lymphoma. Discussion We hypothesize several aspects in the pathogenesis of a such event and review the existing literature on collision tumors.
description: JOP. Journal of the Pancreas, Vol 14, N° 4 (2013): July - p. 304-474
State-building in Afghanistan : a gendered human security perspective
Creators: name: Black, Christina Leanne
Publisher: name: University of British Columbia
Year: 2013

description: With the transition to Afghan national control underway in Afghanistan, questions of legitimacy and security continue to surround the last decade of international military involvement in the country. The initial bombing campaign and subsequent military operations following the terrorist attacks of 9/11 proclaimed the goal of providing humanitarian relief to Afghans as one of the primary motives behind military action. In order to achieve the stated objectives in Afghanistan, the cooperating states implemented a 'comprehensive approach' to state-building, whereby the military intervention was combined with diplomatic and development initiatives. This project critically examines the progressive Canadian involvement and international state-building techniques currently employed in Afghanistan. In conjunction with a historically contextualized consideration of the issues facing Afghans, the 'comprehensive approach' is critiqued through a feminist international relations (IR) lens regarding the humanitarian concerns and overarching legacy of the Afghan conflict.
Additional file 3 of Acid resistance system CadBA is implicated in acid tolerance and biofilm formation and is identified as a new virulence factor of Edwardsiella tarda
Creators: name: Du, Chunmei
name: Huo, Xiaoping
name: Gu, Hanjie
name: Wu, Dongmei
name: Hu, Yonghua
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 3. The swimming ability of complementary strains TX01ΔcadAC and TX01ΔcadBC in the acid swimming plate. TX01, TX01ΔcadAC, and TX01ΔcadBC were cultured in LB medium to an OD600 of 0.5, then aliquots of cell suspensions (1 μL) were inoculated into the center of swimming plates including 0.3% (W/V) agar with pH = 5.5 at 30 °C for 18 h (A). The diameter of the swimming zone from the swimming plate at pH = 5.5 (B). The data are presented as the means ± SEM (N = 3). N, the number of times the experiment was performed. **, P
Scattering Amplitudes from Multivariate Polynomial Division
Creators: name: Mastrolia, Pierpaolo
name: Mirabella, Edoardo
name: Ossola, Giovanni
name: Peraro, Tiziano
Publisher: name: arXiv
Year: 2012
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Theory (hep-th)
subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: We show that the evaluation of scattering amplitudes can be formulated as a problem of multivariate polynomial division, with the components of the integration-momenta as indeterminates. We present a recurrence relation which, independently of the number of loops, leads to the multi-particle pole decomposition of the integrands of the scattering amplitudes. The recursive algorithm is based on the Weak Nullstellensatz Theorem and on the division modulo the Groebner basis associated to all possible multi-particle cuts. We apply it to dimensionally regulated one-loop amplitudes, recovering the well-known integrand-decomposition formula. Finally, we focus on the maximum-cut, defined as a system of on-shell conditions constraining the components of all the integration-momenta. By means of the Finiteness Theorem and of the Shape Lemma, we prove that the residue at the maximum-cut is parametrised by a number of coefficients equal to the number of solutions of the cut itself.
description: 6 pages, 1 figure; Published version. References added
Surpassing the Ratios Conjecture in the 1-level density of Dirichlet $L$-functions
Creators: name: Fiorilli, Daniel
name: Miller, Steven J.
Publisher: name: arXiv
Year: 2011
Subjects: subject: Number Theory (math.NT)
subject: FOS: Mathematics
subject: 11M26, 11M50, 11N13 (Primary) 11N56, 15B52 (Secondary)

description: We study the $1$-level density of low-lying zeros of Dirichlet $L$-functions in the family of all characters modulo $q$, with $Q/2 < q\leq Q$. For test functions whose Fourier transform is supported in $(-3/2, 3/2)$, we calculate this quantity beyond the square-root cancellation expansion arising from the $L$-function Ratios Conjecture of Conrey, Farmer and Zirnbauer. We discover the existence of a new lower-order term which is not predicted by this powerful conjecture. This is the first family where the 1-level density is determined well enough to see a term which is not predicted by the Ratios Conjecture, and proves that the exponent of the error term $Q^{-\frac 12 +ε}$ in the Ratios Conjecture is best possible. We also give more precise results when the support of the Fourier Transform of the test function is restricted to the interval $[-1,1]$. Finally we show how natural conjectures on the distribution of primes in arithmetic progressions allow one to extend the support. The most powerful conjecture is Montgomery's, which implies that the Ratios Conjecture's prediction holds for any finite support up to an error $Q^{-\frac 12 +ε}$.
description: Version 1.2, 30 pages
title: Deepfakes: AI Technology of the Future
Creators: name: Root, Hosanna
Publisher: name: Old Dominion University Libraries
Year: 2022

description: Deepfakes technology’s danger stems from its ability to create realistic but fake synthesized media that people often identify as something that is real. With this powerful technology in the wrong hands, deepfakes can cause devastating havoc through information warfare, election campaign disruptions, and more, creating distrust in society. Disinformation is already rampant today, even without wide deployments of deepfakes, which is concerning given the fact that deepfakes’ nefarious full potentials are yet to be reached.
Cinque anni di Media Inaf: report 2015-2019
Creators: name: MALASPINA, MARCO
name: ALOISIO, Francesca Maria
name: CARBOGNANI, Albino
name: COERO BORGA, Davide
name: FERRONI, Eleonora
name: FIASCONARO, Giuseppe
name: GALLIANI, MARCO
name: NICHELLI, Elisa
name: PARISINI, STEFANO
name: SANDRI, MAURA
name: SOLETTA, PAOLO
name: SPIGA, Rossella
name: LEONARDI, Laura
Publisher: name: OAS Bologna
Year: 2023

description: In questo report, inizialmente realizzato in occasione della presentazione dei prodotti di Terza missione per la VQR 2015-2019, sono illustrate la linea editoriale della testata Media Inaf, le principali attività redazionali e i risultati conseguiti nel quinquennio di riferimento. Per i risultati quantitativi, in particolare, sono esplicitati e descritti gli indicatori utilizzati.
Blepharotoma Blanchard 1850
Creators: name: Allsopp, Peter G.
name: Schoolmeesters, Paul
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Scarabaeidae
Blepharotoma

description: Blepharotoma Blanchard, 1850
[20 species].
Type species Blepharotoma tarsalis Blanchard, 1850, by monotypy.
description: Published as part of Allsopp, Peter G. & Schoolmeesters, Paul, 2024, All genera of the world: Subfamilies Prototroginae, Cretoscarabaeinae, Dynamopodinae, Electrorubesopsinae, Phaenomeridinae, Orphninae, Allidiostomatinae, Aclopinae, Lichniinae, Melolonthinae, Oncerinae, Podolasiinae, Sericinae, Sericoidinae (Animalia: Arthropoda: Insecta: Coleoptera: Scarabaeidae), pp. 104-175 in Megataxa 12 (1) on page 152, DOI: 10.11646/megataxa.12.1.2, http://zenodo.org/record/14984437
Micronutrient Therapy for Chronic Pancreatitis: Premises and Pitfalls
Creators: name: Braganza, Joan Marie
Publisher: name: JOP. Journal of the Pancreas
Year: 2013
Subjects: Antioxidants; Mast Cells; Nociceptors

description: No abstract available
description: JOP. Journal of the Pancreas, Vol 14, N° 4 (2013): July - p. 304-474
Scaling of nestedness in complex networks
Creators: name: Lee, Deok-Sun
name: Maeng, Seong Eun
name: Lee, Jae Woo
Publisher: name: arXiv
Year: 2011
Subjects: subject: Physics and Society (physics.soc-ph)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Social and Information Networks (cs.SI)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: Nestedness characterizes the linkage pattern of networked systems, indicating the likelihood that a node is linked to the nodes linked to the nodes with larger degrees than it. Networks of mutualistic relationship between distinct groups of species in ecological communities exhibit such nestedness, which is known to support the network robustness. Despite such importance, quantitative characteristics of nestedness is little understood. Here we take graph-theoretic approach to derive the scaling properties of nestedness in various model networks. Our results show how the heterogeneous connectivity patterns enhance nestedness. Also we find that the nestedness of bipartite networks depend sensitively on the fraction of different types of nodes, causing nestedness to scale differently for nodes of different types.
description: 9 pages, 4 figures, final version
Soil restraints on steel buried pipelines crossing active seismic faults
Creators: name: Monroy-Concha, Manuel
Publisher: name: University of British Columbia
Year: 2013

description: The quantification and prediction of soil restraint on buried pipelines are essential for the design of pipeline systems crossing seismic faults, and in turn to reduce the risk of pipeline damage due to geotechnical earthquake hazards. Full-scale soil-pipe interaction tests were undertaken to better simulate the mobilization of soil restraints under controlled conditions and to provide insight on a number of currently unresolved technical issues that so far have been investigated only based on small-scale tests. In particular, an existing full-scale testing chamber was significantly modified to simulate pipeline breakout from its soil embedment on one side of a strike-slip fault and on the footwall side of a reverse fault in an effort to characterize lateral, combined axial and lateral, and vertical oblique soil restraints. The experimental system was also used to assess the effectiveness of reducing soil loads on pipelines using geotextiles. The following was noted: (1) approaches based on limit equilibrium reasonably well predict maximum values of lateral soil restraint for shallow pipelines backfilled with sand, with mixture of crushed gravel and sand, and with crushed limestone; (2) the lateral soil restraint on pipes in geotextile-lined trenches increased with increasing relative pipe displacement and could even be higher than the restraint without the geotextile lining. A procedure was developed to capture this behaviour; (3) experimental and numerical results for geotextile-lined trenches suggest that the shear resistance is not controlled solely by the geotextile interface; as such, there is no clear benefit in using geotextile-based mitigation measures for reducing soil loads; (4) the results from tests on combined axial and lateral soil restraints provided limited clarification on whether or not these soil restraints should be considered independent for fault crossing designs. This was due to the difficulty in selecting an axial soil restraint value to anchor existing soil restraint interaction relationships. No axial soil restraint tests were conducted in this work; and (5) values for the maximum vertical oblique soil restraint diminish as the inclination of the angle of breakout of buried pipelines increases with respect to the horizontal.
Additional file 4 of Acid resistance system CadBA is implicated in acid tolerance and biofilm formation and is identified as a new virulence factor of Edwardsiella tarda
Creators: name: Du, Chunmei
name: Huo, Xiaoping
name: Gu, Hanjie
name: Wu, Dongmei
name: Hu, Yonghua
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 4. The expression of acid resistance genes in Edwardsiella tarda under acidic conditions. The exponential phase of overnight cultures of TX01 were grown in normal LB medium at pH 7.0 and acidic medium at pH 5.5 for 1 h. The relative expression of ETAE_3006 and ETAE_1884 were determined by RT-qPCR. The fold difference derived from the values under acidic conditions compared with the values under normal conditions. Data are presented as the means ± SEM (N = 3). N, the number of times the experiment was performed. **, P
Top Decays with Flavor Changing Neutral Higgs Interactions at the LHC
Creators: name: Kao, Chung
name: Cheng, Hai-Yang
name: Hou, Wei-Shu
name: Sayre, Joshua
Publisher: name: arXiv
Year: 2011
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We investigate the prospects for discovering a top quark decaying into one light Higgs boson along with a charm quark in top quark pair production at the CERN Large Hadron Collider (LHC). A general two Higgs doublet model is adopted to study the signature of flavor changing neutral Higgs decay $t \to cϕ^0$, %or $\bar{t} \to \bar{c}ϕ^0$ where $ϕ^0$ could be CP-even ($H^0$) or CP-odd ($A^0$). The dominant physics background is evaluated with realistic acceptance cuts as well as tagging and mistagging efficiencies. For a reasonably large top-charm-Higgs coupling ($λ_{tc}/λ_{t} \agt 0.09$), the abundance of signal events and the %that our acceptance cuts reduction in physics background allow us to establish a $5σ$ signal for $M_ϕ\sim 125$ GeV at the LHC with a center of mass energy ($\sqrt{s}$) of 8 TeV and an integrated luminosity of 20 fb$^{-1}$. The discovery potential will be greatly enhanced with the full energy of $\sqrt{s} = 14$ TeV.
description: Revised version to appear in Physics Letters B
Additional file 1 of Low-dose PLX5622 treatment prevents neuroinflammatory and neurocognitive sequelae after sepsis
Creators: name: Mein, Nils
name: von Stackelberg, Nikolai
name: Wickel, Jonathan
name: Geis, Christian
name: Chung, Ha-Yeun
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Immunology
subject: FOS: Clinical medicine
subject: Hematology
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Fig. S1. Microglia depletion attenuates long-term neurocognitive deficits independent of locomotor behaviour. Table S1: ARRIVE Essential 10 checklist.
Manonychus Moser 1919
Creators: name: Allsopp, Peter G.
name: Schoolmeesters, Paul
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Scarabaeidae
Manonychus

description: Manonychus Moser, 1919b
[8 species].
Type species Manonychus unguicularis Moser, 1919, by monotypy.
description: Published as part of Allsopp, Peter G. & Schoolmeesters, Paul, 2024, All genera of the world: Subfamilies Prototroginae, Cretoscarabaeinae, Dynamopodinae, Electrorubesopsinae, Phaenomeridinae, Orphninae, Allidiostomatinae, Aclopinae, Lichniinae, Melolonthinae, Oncerinae, Podolasiinae, Sericinae, Sericoidinae (Animalia: Arthropoda: Insecta: Coleoptera: Scarabaeidae), pp. 104-175 in Megataxa 12 (1) on page 152, DOI: 10.11646/megataxa.12.1.2, http://zenodo.org/record/14984437
Is S-1 a Potential Game Changer in Adjuvant Therapy of Pancreatic Cancer?
Creators: name: Chaulagain, Chakra P
name: Rothschild, Janice
name: Saif, Muhammad Wasif
Publisher: name: JOP. Journal of the Pancreas
Year: 2013
Subjects: Biological Markers; Chemotherapy, Adjuvant; Equilibrative Nucleoside Transporter 1; Pancreatic Neoplasms; S 1 (combination)

description: There remains a lack of consensus on the optimal adjuvant therapy for pancreatic cancer. In general, chemoradiation is favored in the United States and gemcitabine based chemotherapy is favored in Europe. Both of these approaches have been shown by large prospective, randomized trials to improve disease free survivals and in some studies overall survival. We present the summary of three abstracts from the 2013 American Society of Clinical Oncology (ASCO) Annual Meeting and discuss their potential impact on our clinical practice. Adjuvant oral chemotherapy with S-1 (Fukutomi et al., Abstract #4008) has now emerged as a promising alternative to the traditional gold standard of intravenous gemcitabine in a relatively large randomized phase III clinical trial. Another study by Yoshitomi et al. (Abstract #4056) examined the value of adjuvant chemotherapy with S-1 alone versus combination of S-1 and gemcitabine versus gemcitabine alone in a three arm phase II clinical trial (CAP-002 Study). In terms of biomarkers in pancreatic cancer, Neoptolemos et al. presented the impact of hENT1 tumor levels on the outcome of the patients with pancreatic cancer (Abstract #4006) who had received adjuvant chemotherapy with either 5-flurouracil or gemcitabine in the ESPAC trial.
description: JOP. Journal of the Pancreas, Vol 14, N° 4 (2013): July - p. 304-474