cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1 of Elucidating mechano-pathology of osteoarthritis: transcriptome-wide differences in mechanically stressed aged human cartilage explants
Creators: name: Houtman, Evelyn
name: Tuerlings, Margo
name: Riechelman, Janne
name: Suchiman, Eka H. E. D.
name: van der Wal, Robert J. P.
name: Nelissen, Rob G. H. H.
name: Mei, Hailiang
name: Ramos, Yolande F. M.
name: Coutinho de Almeida, Rodrigo
name: Meulenbelt, Ingrid
Publisher: name: figshare
Year: 2021
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1. Supplementary Tables and Figures. List of content: Supplementary Table S1. [a] Donor characteristics of samples for which RNA was sequenced. [b] Donor characteristics of independent samples used for replication of RNA-sequencing findings. Supplementary Table S2. Primer sequences used for replication and validation by RT-qPCR. Supplementary Table S3. Genes differentially expressed in 65%MS (DEMS) cartilage compared to control cartilage of human osteochondral explants. Supplementary Table S4. Gene enrichment found in Enrichr. Enrichment for [a] 156 DEMS genes in and [b] 92 DEExclusiveMS for the gene ontology terms: biological process, molecular function and cellular component 2018, and pathways: KEGG 2019 human and reactome. Supplementary Table S5. DEMS genes coinciding with previously reported DE genes in OA pathophysiology (DEOA). [a] DEMS genes with same direction of effect as DEOA genes. [b] DEMS genes with opposite direction of effect as DEOA genes. Supplementary Table S6. Exclusive mechanical response genes (DEExclusiveMS). Supplementary Table S7. Previously reported OA risk loci present in our DE gene dataset. Supplementary Table S8. All insulin growth factor binding proteins (IGFBPs) and related DE genes identified in our analysis. Supplementary Figure S1. Venn diagram of coinciding genes between differentially expressed genes in mechanically stressed versus control cartilage from osteochondral explants (DEMS) and previously identified differentially expressed genes in preserved versus lesioned OA cartilage (DEOA). Supplementary Figure S2. Protein-protein interaction network in STRING of proteins encoded by differentially expressed genes (N = 92 genes) not coinciding with OA pathophysiology (DEExclusiveMS). Supplementary Figure S3. Heat-map of proteins present in SASP.
Open-independent, open-locating-dominating sets: structural aspects of some classes of graphs
Creators: name: Cappelle, Márcia R.
name: Coelho, Erika
name: Foulds, Les R.
name: Longo, Humberto J.
Publisher: name: arXiv
Year: 2021
Subjects: subject: Discrete Mathematics (cs.DM)
subject: FOS: Computer and information sciences

description: Let $G=(V(G),E(G))$ be a finite simple undirected graph with vertex set $V(G)$, edge set $E(G)$ and vertex subset $S\subseteq V(G)$. $S$ is termed \emph{open-dominating} if every vertex of $G$ has at least one neighbor in $S$, and \emph{open-independent, open-locating-dominating} (an $OLD_{oind}$-set for short) if no two vertices in $G$ have the same set of neighbors in $S$, and each vertex in $S$ is open-dominated exactly once by $S$. The problem of deciding whether or not $G$ has an $OLD_{oind}$-set has important applications that have been reported elsewhere. As the problem is known to be $\mathcal{NP}$-complete, it appears to be notoriously difficult as we show that its complexity remains the same even for just planar bipartite graphs of maximum degree five and girth six, and also for planar subcubic graphs of girth nine. Also, we present characterizations of both $P_4$-tidy graphs and the complementary prisms of cographs that have an $OLD_{oind}$-set.
description: 18 pages, 5 figures
Area coverage of radial Levy flights with periodic boundary conditions
Creators: name: Vahabi, Mahsa
name: Schulz, Johannes H. P.
name: Shokri, Babak
name: Metzler, Ralf
Publisher: name: arXiv
Year: 2012
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We consider the time evolution of two-dimensional Levy flights in a finite area with periodic boundary conditions. From simulations we show that the fractal path dimension d_f and thus the degree of area coverage grows in time until it reaches the saturation value d_f=2 at sufficiently long times. We also investigate the time evolution of the probability density function and associated moments in these boundary conditions. Finally we consider the mean first passage time as function of the stable index. Our findings are of interest to assess the ergodic behavior of Levy flights, to estimate their efficiency as stochastic search mechanisms and to discriminate them from other types of search processes.
description: 7 pages, 8 figures, RevTeX
Additional file 2 of MetaBinner: a high-performance and stand-alone ensemble binning method to recover individual genomes from complex microbial communities
Creators: name: Wang, Ziye
name: Huang, Pingqin
name: You, Ronghui
name: Sun, Fengzhu
name: Zhu, Shanfeng
Publisher: name: figshare
Year: 2023
Subjects: subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics

description: Additional file 2. Review history.
MPEC 2023-W31 : 2023 QF5
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2023
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
Resolution of dark matter problem in f(T) gravity
Creators: name: Jamil, Mubasher
name: Momeni, D.
name: Myrzakulov, Ratbay
Publisher: name: arXiv
Year: 2012
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: In this paper, we attempt to resolve the dark matter problem in f(T) gravity. Specifically, from our model we successfully obtain the flat rotation curves of galaxies containing dark matter. Further, we obtain the density profile of dark matter in galaxies. Comparison of our analytical results shows that our torsion-based toy model for dark matter is in good agreement with empirical data-based models. It shows that we can address the dark matter as an effect of torsion of the space.
description: 14 pages, 3 figures
Combining Morphological and Histogram based Text Line Segmentation in the OCR Context
Creators: name: Schneider, Pit
Publisher: name: arXiv
Year: 2021
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences
subject: I.4.6

description: Text line segmentation is one of the pre-stages of modern optical character recognition systems. The algorithmic approach proposed by this paper has been designed for this exact purpose. Its main characteristic is the combination of two different techniques, morphological image operations and horizontal histogram projections. The method was developed to be applied on a historic data collection that commonly features quality issues, such as degraded paper, blurred text, or presence of noise. For that reason, the segmenter in question could be of particular interest for cultural institutions, that want access to robust line bounding boxes for a given historic document. Because of the promising segmentation results that are joined by low computational cost, the algorithm was incorporated into the OCR pipeline of the National Library of Luxembourg, in the context of the initiative of reprocessing their historic newspaper collection. The general contribution of this paper is to outline the approach and to evaluate the gains in terms of accuracy and speed, comparing it to the segmentation algorithm bundled with the used open source OCR software.
description: Journal of Data Mining and Digital Humanities; Small adjustments
IPN localizations of Konus short gamma-ray bursts
Creators: name: Pal'shin, V. D.
name: Hurley, K.
name: Svinkin, D. S.
name: Aptekar, R. L.
name: Golenetskii, S. V.
name: Frederiks, D. D.
name: Mazets, E. P.
name: Oleynik, P. P.
name: Ulanov, M. V.
name: Cline, T.
name: Mitrofanov, I. G.
name: Golovin, D. V.
name: Kozyrev, A. S.
name: Litvak, M. L.
name: Sanin, A. B.
name: Boynton, W.
name: Fellows, C.
name: Harshman, K.
name: Trombka, J.
name: McClanahan, T.
name: Starr, R.
name: Goldsten, J.
name: Gold, R.
name: Rau, A.
name: von Kienlin, A.
name: Savchenko, V.
name: Smith, D. M.
name: Hajdas, W.
name: Barthelmy, S. D.
name: Cummings, J.
name: Gehrels, N.
name: Krimm, H.
name: Palmer, D.
name: Yamaoka, K.
name: Ohno, M.
name: Fukazawa, Y.
name: Hanabata, Y.
name: Takahashi, T.
name: Tashiro, M.
name: Terada, Y.
name: Murakami, T.
name: Makishima, K.
name: Briggs, M. S.
name: Kippen, R. M.
name: Kouveliotou, C.
name: Meegan, C.
name: Fishman, G.
name: Connaughton, V.
name: Boer, M.
name: Guidorzi, C.
name: Frontera, F.
name: Montanari, E.
name: Rossi, F.
name: Feroci, M.
name: Amati, L.
name: Nicastro, L.
name: Orlandini, M.
name: Connaughton, V.
name: Del Monte, E.
name: Costa, E.
name: Donnarumma, I.
name: Evangelista, Y.
name: Lapshov, I.
name: Lazzarotto, F.
name: Pacciani, L.
name: Rapisarda, M.
name: Soffitta, P.
name: Di Cocco, G.
name: Fuschino, F.
name: Galli, M.
name: Labanti, C.
name: Marisaldi, M.
name: Atteia, J. -L.
name: Vanderspek, R.
name: Ricker, G.
Publisher: name: arXiv
Year: 2013
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: Between the launch of the \textit{GGS Wind} spacecraft in 1994 November and the end of 2010, the Konus-\textit{Wind} experiment detected 296 short-duration gamma-ray bursts (including 23 bursts which can be classified as short bursts with extended emission). During this period, the IPN consisted of up to eleven spacecraft, and using triangulation, the localizations of 271 bursts were obtained. We present the most comprehensive IPN localization data on these events. The short burst detection rate, $\sim$18 per year, exceeds that of many individual experiments.
description: Published version
Computing Parameterized Invariants of Parameterized Petri Nets
Creators: name: Esparza, Javier
name: Raskin, Mikhail
name: Welzel, Christoph
Publisher: name: arXiv
Year: 2021
Subjects: subject: Distributed, Parallel, and Cluster Computing (cs.DC)
subject: Multiagent Systems (cs.MA)
subject: FOS: Computer and information sciences

description: A fundamental advantage of Petri net models is the possibility to automatically compute useful system invariants from the syntax of the net. Classical techniques used for this are place invariants, P-components, siphons or traps. Recently, Bozga et al. have presented a novel technique for the \emph{parameterized} verification of safety properties of systems with a ring or array architecture. They show that the statement \enquote{for every instance of the parameterized Petri net, all markings satisfying the linear invariants associated to all the P-components, siphons and traps of the instance are safe} can be encoded in \acs{WS1S} and checked using tools like MONA. However, while the technique certifies that this infinite set of linear invariants extracted from P-components, siphons or traps are strong enough to prove safety, it does not return an explanation of this fact understandable by humans. We present a CEGAR loop that constructs a \emph{finite} set of \emph{parameterized} P-components, siphons or traps, whose infinitely many instances are strong enough to prove safety. For this we design parameterization procedures for different architectures.
description: Final version from editor
Nonlinear terahertz metamaterials via field-enhanced carrier dynamics in GaAs
Creators: name: Fan, Kebin
name: Hwang, Harold Y.
name: Liu, Mengkun
name: Strikwerda, Andrew C.
name: Sternbach, Aaron
name: Zhang, Jingdi
name: Zhao, Xiaoguang
name: Zhang, Xin
name: Nelson, Keith A.
name: Averitt, Richard D.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: We demonstrate nonlinear metamaterial split ring resonators (SRRs) on GaAs at terahertz frequencies. For SRRs on doped GaAs films, incident terahertz radiation with peak fields of ~20 - 160 kV/cm drives intervalley scattering. This reduces the carrier mobility and enhances the SRR LC response due to a conductivity decrease in the doped thin film. Above ~160 kV/cm, electric field enhancement within the SRR gaps leads to efficient impact ionization, increasing the carrier density and the conductivity which, in turn, suppresses the SRR resonance. We demonstrate an increase of up to 10 orders of magnitude in the carrier density in the SRR gaps on semi-insulating GaAs substrate. Furthermore, we show that the effective permittivity can be swept from negative to positive values with increasing terahertz field strength in the impact ionization regime, enabling new possibilities for nonlinear metamaterials.
description: 5 pages, 4 figures
Hugenottische Pamphletistik und gelehrtes Wissen: die »Déclaration« des Louis de Bourbon, prince de Condé (1562). Ein Beitrag zur politischen Ideengeschichte der Anfangsphase der französischen Religionskriege
Creators: name: Haug-Moritz, Gabriele
Publisher: name: Francia
Year: 2018

description: -
description: Francia, Bd. 39 (2012)
Ultrahigh-Gain Phototransistors Based on Graphene-MoS2 Heterostructures
Creators: name: Zhang, Wenjing
name: Chuu, Chih-Piao
name: Huang, Jing-Kai
name: Chen, Chang-Hsiao
name: Tsai, Meng-Lin
name: Chang, Yung-Huang
name: Liang, Chi-Te
name: He, Jr-Hau
name: Chou, Mei-Ying
name: Li, Lain-Jong
Publisher: name: arXiv
Year: 2013
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Due to its high carrier mobility, broadband absorption, and fast response time, graphene is attractive for optoelectronics and photodetection applications. However, the extraction of photoelectrons in conventional metal-graphene junction devices is limited by their small junction area, where the typical photoresponsivity is lower than 0.01 AW-1. On the other hand, the atomically thin layer of molybdenum disulfide (MoS2) is a two-dimensional (2d) nanomaterial with a direct and finite band gap, offering the possibility of acting as a 2d light absorber. The optoelectronic properties of the heterostructure of these two films is therefore of great interest. The growth of large-area graphene using chemical vapour deposition (CVD) has become mature nowadays. However, the growth of large-area MoS2 monolayer is still challenging. In this work, we show that a large-area and continuous MoS2 monolayer is achievable using a CVD method. Both graphene and MoS2 layers are transferable onto desired substrates, making possible immediate and large-scale optoelectronic applications. We demonstrate that a phototransistor based on the graphene/MoS2 heterostructure is able to provide a high photoresponsivity greater than 107 A/W while maintaining its ultrathin and planar structure. Our experiments show that the electron-hole pairs are produced in the MoS2 layer after light absorption and subsequently separated across the layers. Contradictory to the expectation based on the conventional built-in electric field model for metal-semiconductor contacts, photoelectrons are injected into the graphene layer rather than trapped in MoS2 due to the alignment of the graphene Fermi level with the conduction band of MoS2. The band alignment is sensitive to the presence of a perpendicular electric field arising from, for example, Coulomb impurities or an applied gate voltage, resulting in a tuneable photoresponsivity.
Neural Field Models: A mathematical overview and unifying framework
Creators: name: Cook, Blake J.
name: Peterson, Andre D. H.
name: Woldman, Wessel
name: Terry, John R.
Publisher: name: arXiv
Year: 2021
Subjects: subject: Neurons and Cognition (q-bio.NC)
subject: Dynamical Systems (math.DS)
subject: FOS: Biological sciences
subject: FOS: Mathematics

description: Mathematical modelling of the macroscopic electrical activity of the brain is highly non-trivial and requires a detailed understanding of not only the associated mathematical techniques, but also the underlying physiology and anatomy. Neural field theory is a population-level approach to modelling the non-linear dynamics of large populations of neurons, while maintaining a degree of mathematical tractability. This class of models provides a solid theoretical perspective on fundamental processes of neural tissue such as state transitions between different brain activities as observed during epilepsy or sleep. Various anatomical, physiological, and mathematical assumptions are essential for deriving a minimal set of equations that strike a balance between biophysical realism and mathematical tractability. However, these assumptions are not always made explicit throughout the literature. Even though neural field models (NFMs) first appeared in the literature in the early 1970's, the relationships between them have not been systematically addressed. This may partially be explained by the fact that the inter-dependencies between these models are often implicit and non-trivial. Herein we provide a review of key stages of the history and development of neural field theory and contemporary uses of this branch of mathematical neuroscience. First, the principles of the theory are summarised throughout a discussion of the pioneering models by Wilson and Cowan, Amari and Nunez. Upon thorough review of these models, we then present a unified mathematical framework in which all neural field models can be derived by applying different assumptions. We then use this framework to i) derive contemporary models by Robinson, Jansen and Rit, Wendling, Liley, and Steyn-Ross, and ii) make explicit the many significant inherited assumptions that exist in the current literature.
description: 67 pages, 10 figures, 1 table
Additional file 1 of SELP Asp603Asn and severe thrombosis in COVID-19 males
Creators: name: Fallerini, Chiara
name: Daga, Sergio
name: Benetti, Elisa
name: Picchiotti, Nicola
name: Zguro, Kristina
name: Catapano, Francesca
name: Baroni, Virginia
name: Lanini, Simone
name: Bucalossi, Alessandro
name: Marotta, Giuseppe
name: Colombo, Francesca
name: Baldassarri, Margherita
name: Fava, Francesca
name: Beligni, Giada
name: Di Sarno, Laura
name: Alaverdian, Diana
name: Palmieri, Maria
name: Croci, Susanna
name: Isidori, Andrea M.
name: Furini, Simone
name: Frullanti, Elisa
name: Renieri, Alessandra
name: Mari, Francesca
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Additional file 1. Material and Methods plus study group appendix.
Towards quantized complex numbers: $q$-deformed Gaussian integers and the Picard group
Creators: name: Ovsienko, Valentin
Publisher: name: arXiv
Year: 2021
Subjects: subject: Quantum Algebra (math.QA)
subject: Combinatorics (math.CO)
subject: FOS: Mathematics

description: This work is a first step towards a theory of "$q$-deformed complex numbers". Assuming the invariance of the $q$-deformation under the action of the modular group I prove the existence and uniqueness of the operator of translations by~$i$ compatible with this action. Obtained in such a way $q$-deformed Gaussian integers have interesting properties and are related to the Chebyshev polynomials.
description: 21 pages
Additional file 1 of Early emergence of sexual dimorphism in offspring leukocyte telomere length was associated with maternal and children’s glucose metabolism—a longitudinal study
Creators: name: Wong, Kwun Kiu
name: Cheng, Feifei
name: Lim, Cadmon K. P.
name: Tam, Claudia H. T.
name: Tutino, Greg
name: Yuen, Lai Yuk
name: Wang, Chi Chiu
name: Hou, Yong
name: Chan, Michael H. M.
name: Ho, Chung Shun
name: Joglekar, Mugdha V.
name: Hardikar, Anandwardhan A.
name: Jenkins, Alicia J.
name: Metzger, Boyd E.
name: Lowe, William L.
name: Tam, Wing Hung
name: Ma, Ronald C. W.
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Computational Biology

description: Additional file 1.
Back to the Coordinated Attack Problem
Creators: name: Godard, Emmanuel
name: Perdereau, Eloi
Publisher: name: arXiv
Year: 2021
Subjects: subject: Distributed, Parallel, and Cluster Computing (cs.DC)
subject: FOS: Computer and information sciences

description: We consider the well known Coordinated Attack Problem, where two generals have to decide on a common attack, when their messengers can be captured by the enemy. Informally, this problem represents the difficulties to agree in the presence of communication faults. We consider here only omission faults (loss of message), but contrary to previous studies, we do not to restrict the way messages can be lost, i.e. we make no specific assumption, we use no specific failure metric. In the large subclass of message adversaries where the double simultaneous omission can never happen, we characterize which ones are obstructions for the Coordinated Attack Problem. We give two proofs of this result. One is combinatorial and uses the classical bivalency technique for the necessary condition. The second is topological and uses simplicial complexes to prove the necessary condition. We also present two different Consensus algorithms that are combinatorial (resp. topological) in essence. Finally, we analyze the two proofs and illustrate the relationship between the combinatorial approach and the topological approach in the very general case of message adversaries. We show that the topological characterization gives a clearer explanation of why some message adversaries are obstructions or not. This result is a convincing illustration of the power of topological tools for distributed computability.
description: Mathematical Structures in Computer Science, 2021
Quantum Supergroups I. Foundations
Creators: name: Clark, Sean
name: Hill, David
name: Wang, Weiqiang
Publisher: name: arXiv
Year: 2013
Subjects: subject: Quantum Algebra (math.QA)
subject: Representation Theory (math.RT)
subject: FOS: Mathematics

description: In this part one of a series of papers, we introduce a new version of quantum covering and super groups with no isotropic odd simple root, which is suitable for the studies of integrable modules, integral forms and bar-involution. A quantum covering group involves a quantum parameter q and a sign parameter pi squaring to 1, and it specializes to a quantum supergroup when pi=-1. Following Lusztig, we formulate and establish various structural results of the quantum covering groups, including bilinear form, quasi-R-matrix, Casimir, character formulas for integrable modules, and higher Serre relations.
description: v1 30 pages; v2 31 pages, minor corrections and adapted to journal guidelines, to appear in Transformation Groups
Additional file 1 of Projected soil organic carbon loss in response to climate warming and soil water content in a loess watershed
Creators: name: Zhao, Fubo
name: Wu, Yiping
name: Hui, Jinyu
name: Sivakumar, Bellie
name: Meng, Xianyong
name: Liu, Shuguang
Publisher: name: figshare
Year: 2021
Subjects: subject: Ecology
subject: FOS: Biological sciences

description: Additional file 1. Additional figures.
Building Specifications in the Event-B Institution
Creators: name: Farrell, Marie
name: Monahan, Rosemary
name: Power, James F.
Publisher: name: arXiv
Year: 2021
Subjects: subject: Logic in Computer Science (cs.LO)
subject: Formal Languages and Automata Theory (cs.FL)
subject: FOS: Computer and information sciences

description: This paper describes a formal semantics for the Event-B specification language using the theory of institutions. We define an institution for Event-B, EVT, and prove that it meets the validity requirements for satisfaction preservation and model amalgamation. We also present a series of functions that show how the constructs of the Event-B specification language can be mapped into our institution. Our semantics sheds new light on the structure of the Event-B language, allowing us to clearly delineate three constituent sub-languages: the superstructure, infrastructure and mathematical languages. One of the principal goals of our semantics is to provide access to the generic modularisation constructs available in institutions, including specification-building operators for parameterisation and refinement. We demonstrate how these features subsume and enhance the corresponding features already present in Event-B through a detailed study of their use in a worked example. We have implemented our approach via a parser and translator for Event-B specifications, EBtoEVT, which also provides a gateway to the Hets toolkit for heterogeneous specification.
Slides UniUPO - Tavola Rotonda VII Convegno AISA
Creators: name: Gruppo OA UPO
Publisher: name: Zenodo
Year: 2022
Subjects: open access, open science, democrazia, università del Piemonte Orientale

description: Le risposte dell'Università del Piemonte Orientale ai quesiti della Tavola Rotonda del VII Convegno AISA (2022)
Thorichthys callolepis Regan
Creators: name: Ortega-Olivares, Mirza P.
name: García-Prieto, Luis
name: García-Varela, Martín
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Perciformes
Cichlidae
Thorichthys
Thorichthys callolepis

description: Thorichthys callolepis (Regan)
 Paradilepis caballeroi
  Thorichthys meeki (Brind)  Valipora mutabilis
 CYPRINIDAE
  Aztecula sallaei (Günther)  Cyclustera ralli
  Cyprinus carpio L.
 Cyclustera ralli
 Glossocercus sp.
 Paradilepis caballeroi Paradilepis sp.
 CYPRINODONTIDAE
  Cyprinodon artifrons Hubbs  Glossocercus caribaensis
  Cyprinodon meeki Miller
 Cyclustera ralli
  Cyprinodon nazas Miller
 Neovalipora sp.
  Floridichthys polyommus Hubbs  Cyclustera capito
 Glossocercus caribaensis
 ELEOTRIDAE
  Dormitator latifrons (Richardson)  Parvitaenia cochlearii Valipora sp.
  Dormitator maculatus (Bloch)  Gryporhynchidae gen. sp.
  Eleotris picta Kner
 Parvitaenia cochlearii Valipora sp.
  Gobiomorus dormitor Lacepède  Gryporhynchidae gen. sp.
  Gobiomorus maculatus (Günther)  Parvitaenia cochlearii
 FUNDULIDAE
  Fundulus grandissimus Hubbs  Glossocercus caribaensis
  Fundulus lima Vaillant
 Valipora sp.
  Fundulus persimilis Miller  Glossocercus caribaensis
 GOODEIDAE
  Allodontichthys zonistius (Hubbs)  Gryporhynchidae gen. sp.
  Alloophorus robustus Bean  Cyclustera ralli
  Chapalichthys encaustus (Jordan & Snyder)
 Cyclustera ralli
  Girardinichthys multiradiatus (Meek)  Cyclustera ralli
 Valipora campylancristrota
description: Published as part of Ortega-Olivares, Mirza P., García-Prieto, Luis & García-Varela, Martín, 2014, Gryporhynchidae (Cestoda: Cyclophyllidea) in Mexico: species list, hosts, distribution and new records, pp. 101-125 in Zootaxa 3795 (2) on page 112, DOI: 10.11646/zootaxa.3795.2.1, http://zenodo.org/record/225799
The TRENDS High-Contrast Imaging Survey. III. A Faint White Dwarf Companion Orbiting HD 114174
Creators: name: Crepp, Justin R.
name: Johnson, John Asher
name: Howard, Andrew W.
name: Marcy, Geoffrey W.
name: Gianninas, Alexandros
name: Kilic, Mukremin
name: Wright, Jason T.
Publisher: name: arXiv
Year: 2013
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: The nearby Sun-like star HD 114174 exhibits a strong and persistent Doppler acceleration indicating the presence of an unseen distant companion. We have acquired high-contrast imaging observations of this star using NIRC2 at Keck and report the direct detection of the body responsible for causing the "trend". HD 114174 B has a projected separation of 692+/-9 mas (18.1 AU) and is 10.75+/-0.12 magnitudes (contrast of 5x10{-5}) fainter than its host in the K-band, requiring aggressive point-spread function subtraction to identify. Our astrometric time baseline of 1.4 years demonstrates physical association through common proper motion. We find that the companion has absolute magnitude, M_J=13.97+/-0.11, and colors, J-K= 0.12+/-0.16 mag. These characteristics are consistent with an ~T3 dwarf, initially leading us to believe that HD 114174 B was a substellar object. However, a dynamical analysis that combines radial velocity measurements with available imaging data indicates a minimum mass of m=0.260+/-0.010Msun. We conclude that HD 114174 B must be a white dwarf. Assuming a hydrogen-rich composition, atmospheric and evolutionary model fits yield an effective temperature Teff = 8160+/-4000 K, surface gravity log g=8.90+/-0.02, and cooling age of t_c=3.4 Gyr, which is consistent with the 4.7+/-2.4 Gyr host star isochronal age estimate. HD 114174 B is a benchmark object located only d=26.1 pc from the Sun. It may be studied at a level of detail comparable to Sirius and Procyon, and used to understand the link between the mass of white dwarf remnants with that of their progenitors.
description: ApJ, in press
Additional file 2 of Early emergence of sexual dimorphism in offspring leukocyte telomere length was associated with maternal and children’s glucose metabolism—a longitudinal study
Creators: name: Wong, Kwun Kiu
name: Cheng, Feifei
name: Lim, Cadmon K. P.
name: Tam, Claudia H. T.
name: Tutino, Greg
name: Yuen, Lai Yuk
name: Wang, Chi Chiu
name: Hou, Yong
name: Chan, Michael H. M.
name: Ho, Chung Shun
name: Joglekar, Mugdha V.
name: Hardikar, Anandwardhan A.
name: Jenkins, Alicia J.
name: Metzger, Boyd E.
name: Lowe, William L.
name: Tam, Wing Hung
name: Ma, Ronald C. W.
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Computational Biology

description: Additional file 2: Supplementary table 1. Univariate associations between cord and children’s LTL with their basic characteristics. Supplementary table 2. Offspring LTL at follow up and associations with glucose and insulin related traits. Supplementary table 3. Basic characteristics offspring at follow-up traits stratified according to children’s LTL tertiles. Supplementary table 4. Regression result for Cord blood LTL association with newborn and maternal glycaemic traits. Supplementary table 5. Sex-stratified maternal and offspring characteristics. Supplementary table 6. Glucose and insulin traits stratified according to LTL change group. Supplementary table 7. Sex -stratified children’s LTL associations with maternal and newborn characteristics. Supplementary table 8. Sex -stratified cord blood LTL associations with maternal and newborn characteristics. Supplementary table 9. Baseline characteristics between mothers returned for follow-up to mothers without follow-up. Supplementary figure 1. Diagram for HAPO and HAPO follow-up recruitment and mother-child pair excluded with reasons. Supplementary figure 2. The Heatmap showing the correlations between maternal (MA) and offspring (OS) glucose and insulin traits. Supplementary figure 3. Telomere length percentage change histogram. Supplementary figure 4. Schematic illustration on the conceptual associations between glucose and LTL. Supplementary figure 5. Correlations between maternal (MA) and offspring (OS) glucose levels. Supplementary figure 6. The calculation of glucose area under the curve.
Handle decompositions for a class of closed orientable PL 4-manifolds
Creators: name: Basak, Biplab
name: Binjola, Manisha
Publisher: name: arXiv
Year: 2021
Subjects: subject: Geometric Topology (math.GT)
subject: Combinatorics (math.CO)
subject: FOS: Mathematics
subject: Primary 57Q15, Secondary 05C15, 05E45, 57Q05, 57M15, 57M50

description: In this article, we study a class of closed connected orientable PL $4$-manifolds admitting a semi-simple crystallization and which have an infinite cyclic fundamental group. We show that the manifold in the class admits a handle decomposition in which the number of $2$-handles depends upon its second Betti number and other $h$-handles ($h \leq 4$) are at most $2$. More precisely, our main result is the following. For a closed connected orientable PL $4$-manifold having a semi-simple crystallization with the fundamental group as $\mathbb{Z}$, we have constructed a handle decomposition for $M$ as one of the following types: $(1)$ one $0$-handle, two $1$-handles, $1+β_2(M)$ $2$-handles, one $3$-handle and one $4$-handle, $(2)$ one $0$-handle, one $1$-handle, $β_2(M)$ $2$-handles, one $3$-handle and one $4$-handle, where $β_2(M)$ denotes the second Betti number of manifold $M$ with $\mathbb{Z}$ coefficients.
description: 9 pages, 1 figure. To appear in the Indian Journal of Pure and Applied Mathematics
Radio frequency spectrum of fermions near a narrow Feshbach resonance
Creators: name: Xu, Junjun
name: Gu, Qiang
name: Mueller, Erich J.
Publisher: name: arXiv
Year: 2013
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: FOS: Physical sciences

description: We calculate the radio frequency (RF) spectrum of fermionic atoms near a narrow Feshbach resonance, explaining observations made in ultracold samples of $^6\rm{Li}$ [E. L. Hazlett {\it et al.}, Phys. Rev. Lett. {\bf 108}, 045304 (2012)]. We use a two channel resonance model to show that the RF spectrum contains two peaks. In the wide-resonance limit, nearly all spectral weight lies in one of these peaks, and typically the second peak is very broad. We find strong temperature dependence, which can be traced to the energy dependence of the two-particle scattering. In addition to microscopic calculations, we use sum rule arguments to find generic features of the spectrum which are model independent.
description: 7 pages, 5 figures
Additional file 1 of Alpha-synuclein activates the classical complement pathway and mediates complement-dependent cell toxicity
Creators: name: Gregersen, Emil
name: Betzer, Cristine
name: Kim, Woojin S.
name: Kovacs, Gergo
name: Reimer, Lasse
name: Halliday, Glenda M.
name: Thiel, Steffen
name: Jensen, Poul Henning
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Physiology
subject: Biotechnology
subject: Science Policy
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 1. Full western blot from Figure 3 with protein ladder.
MPEC 2023-W32 : 2023 SA2
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2023
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
Zonal flow in a resonant precessing cylinder
Creators: name: Gao, Donglai
name: Meunier, Patrice
name: Dizès, Stéphane Le
name: Eloy, Christophe
Publisher: name: arXiv
Year: 2021
Subjects: subject: Fluid Dynamics (physics.flu-dyn)
subject: Geophysics (physics.geo-ph)
subject: FOS: Physical sciences

description: A cylinder undergoes precession when it rotates around its axis and this axis itself rotates around another direction. In a precessing cylinder full of fluid, a steady and axisymmetric component of the azimuthal flow is generally present. This component is called a zonal flow. Although zonal flows have been often observed in experiments and numerical simulations, their origin has eluded theoretical approaches so far. Here, we develop an asymptotic analysis to calculate the zonal flow forced in a resonant precessing cylinder, that is when the harmonic response is dominated by a single Kelvin mode. We find that the zonal flow originates from three different sources: (1) the nonlinear interaction of the inviscid Kelvin mode with its viscous correction; (2) the steady and axisymmetric response to the nonlinear interaction of the Kelvin mode with itself; and (3) the nonlinear interactions in the end boundary layers. In a precessing cylinder, two additional sources arise due to the equatorial Coriolis force and the forced shear flow. However, they cancel exactly. The study thus generalises to any Kelvin mode, forced by precession or any other mechanism. The present theoretical predictions of the zonal flow are confirmed by comparison with numerical simulations and experimental results. We also show numerically that the zonal flow is always retrograde in a resonant precessing cylinder (m=1) or when it results from resonant Kelvin modes of azimuthal wavenumbers m=2, 3, and presumably higher.
Additional file 1 of Microglia are involved in phagocytosis and extracellular digestion during Zika virus encephalitis in young adult immunodeficient mice
Creators: name: Enlow, William
name: Bordeleau, Maude
name: Piret, Jocelyne
name: Ibáñez, Fernando González
name: Uyar, Olus
name: Venable, Marie-Christine
name: Goyette, Nathalie
name: Carbonneau, Julie
name: Tremblay, Marie-Eve
name: Boivin, Guy
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Neuroscience
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases
subject: 60506 Virology

description: Additional file 1. Supplementary methods.
Altruism can proliferate through group/kin selection despite high random gene flow
Creators: name: Schonmann, Roberto H.
name: Vicente, Renato
name: Caticha, Nestor
Publisher: name: arXiv
Year: 2012
Subjects: subject: Populations and Evolution (q-bio.PE)
subject: FOS: Biological sciences

description: The ways in which natural selection can allow the proliferation of cooperative behavior have long been seen as a central problem in evolutionary biology. Most of the literature has focused on interactions between pairs of individuals and on linear public goods games. This emphasis led to the conclusion that even modest levels of migration would pose a serious problem to the spread of altruism in group structured populations. Here we challenge this conclusion, by analyzing evolution in a framework which allows for complex group interactions and random migration among groups. We conclude that contingent forms of strong altruism can spread when rare under realistic group sizes and levels of migration. Our analysis combines group-centric and gene-centric perspectives, allows for arbitrary strength of selection, and leads to extensions of Hamilton's rule for the spread of altruistic alleles, applicable under broad conditions.
description: 5 pages, 2 figures. Supplementary material with 50 pages and 26 figures
Converse extensionality and apartness
Creators: name: Berg, Benno van den
name: Passmann, Robert
Publisher: name: arXiv
Year: 2021
Subjects: subject: Logic (math.LO)
subject: Logic in Computer Science (cs.LO)
subject: Category Theory (math.CT)
subject: FOS: Mathematics
subject: FOS: Computer and information sciences

description: In this paper we try to find a computational interpretation for a strong form of extensionality, which we call "converse extensionality". Converse extensionality principles, which arise as the Dialectica interpretation of the axiom of extensionality, were first studied by Howard. In order to give a computational interpretation to these principles, we reconsider Brouwer's apartness relation, a strong constructive form of inequality. Formally, we provide a categorical construction to endow every typed combinatory algebra with an apartness relation. We then exploit that functions reflect apartness, in addition to preserving equality, to prove that the resulting categories of assemblies model a converse extensionality principle.
Additional file 1 of Teaching to transform surgical culture: an educational programme and thematic analysis in a general surgery department
Creators: name: Dave, Madhav Sanatkumar
name: Mobarak, Shahd
name: Tarazi, Munir
name: Macutkiewicz, Christian
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases

description: Additional file 1.
MPEC 2023-W33 : 2023 TT6
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2023
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
Additional file 2 of Microglia are involved in phagocytosis and extracellular digestion during Zika virus encephalitis in young adult immunodeficient mice
Creators: name: Enlow, William
name: Bordeleau, Maude
name: Piret, Jocelyne
name: Ibáñez, Fernando González
name: Uyar, Olus
name: Venable, Marie-Christine
name: Goyette, Nathalie
name: Carbonneau, Julie
name: Tremblay, Marie-Eve
name: Boivin, Guy
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Neuroscience
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases
subject: 60506 Virology

description: Additional file 2: Supplementary Table 1. Scoring system used to evaluate the extent of Zika virus antigen immunostaining in mouse brain.
Downlink MIMO HetNets: Modeling, Ordering Results and Performance Analysis
Creators: name: Dhillon, Harpreet S.
name: Kountouris, Marios
name: Andrews, Jeffrey G.
Publisher: name: arXiv
Year: 2013
Subjects: subject: Information Theory (cs.IT)
subject: Networking and Internet Architecture (cs.NI)
subject: FOS: Computer and information sciences

description: We develop a general downlink model for multi-antenna heterogeneous cellular networks (HetNets), where base stations (BSs) across tiers may differ in terms of transmit power, target signal-to-interference-ratio (SIR), deployment density, number of transmit antennas and the type of multi-antenna transmission. In particular, we consider and compare space division multiple access (SDMA), single user beamforming (SU-BF), and baseline single-input single-output (SISO) transmission. For this general model, the main contributions are: (i) ordering results for both coverage probability and per user rate in closed form for any BS distribution for the three considered techniques, using novel tools from stochastic orders, (ii) upper bounds on the coverage probability assuming a Poisson BS distribution, and (iii) a comparison of the area spectral efficiency (ASE). The analysis concretely demonstrates, for example, that for a given total number of transmit antennas in the network, it is preferable to spread them across many single-antenna BSs vs. fewer multi-antenna BSs. Another observation is that SU-BF provides higher coverage and per user data rate than SDMA, but SDMA is in some cases better in terms of ASE.
description: IEEE Transactions on Wireless Communications, to appear
Supersymmetry breaking, conserved charges and stability in N=1 Super KdV
Creators: name: Restuccia, A.
name: Sotomayor, A.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Mathematical Physics (math-ph)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We analyse the non-abelian algebra and the supersymmetric cohomology associated to the local and non-local conserved charges of N=1 SKdV under Poisson brackets. We then consider the breaking of the supersymmetry and obtain an integrable model in terms of Clifford algebra valued fields. We discuss the remaining conserved charges of the new system and the stability of the solitonic solutions.
description: Contribution to the Proceedings of the International Conference on Mathematical Modeling in Physical Sciences(September 3-7, 2012, Budapest, Hungary). To be published in Journal of Physics: Conference Series. 7 pages
Optimal Ciliary Locomotion of Axisymmetric Microswimmers
Creators: name: Guo, Hanliang
name: Zhu, Hai
name: Liu, Ruowen
name: Bonnet, Marc
name: Veerapaneni, Shravan
Publisher: name: arXiv
Year: 2021
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences

description: Many biological microswimmers locomote by periodically beating the densely-packed cilia on their cell surface in a wave-like fashion. While the swimming mechanisms of ciliated microswimmers have been extensively studied both from the analytical and the numerical point of view, the optimization of the ciliary motion of microswimmers has received limited attention, especially for non-spherical shapes. In this paper, using an envelope model for the microswimmer, we numerically optimize the ciliary motion of a ciliate with an arbitrary axisymmetric shape. The forward solutions are found using a fast boundary integral method, and the efficiency sensitivities are derived using an adjoint-based method. Our results show that a prolate microswimmer with a 2:1 aspect ratio shares similar optimal ciliary motion as the spherical microswimmer, yet the swimming efficiency can increase two-fold. More interestingly, the optimal ciliary motion of a concave microswimmer can be qualitatively different from that of the spherical microswimmer, and adding a constraint to the ciliary length is found to improve, on average, the efficiency for such swimmers.
description: 19 pages, 7 figures
THE PROCESS OF INSTABILITY IN CREATIVE THINKING
Creators: name: "Silk Road" international university of tourism and cultural heritage  Ass. Prof.  (PhD) Boynazarov Odiljon Faizullayevych
Publisher: name: Zenodo
Year: 2023

description: This article discusses the nature and specificity of creative thinking. The article examines the instability aspects of creative thinking. In the process of evolutionary development, the system of creative thinking of the individual society has been philosophically analyzed.
Key words: creativity, creative thinking, instability, factors, imagination, coincidence.