title: ÐÐ¾Ð¸ÑÐº ÑÐ¸Ð³Ð½Ð°Ð»Ð¾Ð² Ð¿Ð¾Ð»Ð¸Ð³ÐµÐ½Ð½Ð¾Ð¹ Ð°Ð´Ð°Ð¿ÑÐ°ÑÐ¸Ð¸ Ð² Ð³ÐµÐ½Ð¾Ð¼Ðµ Ð½ÑÑÐ°
title: Ð²ÑÐ¿ÑÑÐºÐ½Ð°Ñ ÐºÐ²Ð°Ð»Ð¸ÑÐ¸ÐºÐ°ÑÐ¸Ð¾Ð½Ð½Ð°Ñ ÑÐ°Ð±Ð¾ÑÐ° Ð¼Ð°Ð³Ð¸ÑÑÑÐ°
titleType: Subtitle
title: Searching for Signals of Polygenic Adaptation in Chickpea Genome
Creators: name: ÐÐ¾Ð´Ð¾Ð»ÑÐ½ÑÐ¹, ÐÐ¾ÑÐ¸Ñ
Publisher: name: Ð¡Ð°Ð½ÐºÑ-ÐÐµÑÐµÑÐ±ÑÑÐ³ÑÐºÐ¸Ð¹ Ð¿Ð¾Ð»Ð¸ÑÐµÑÐ½Ð¸ÑÐµÑÐºÐ¸Ð¹ ÑÐ½Ð¸Ð²ÐµÑÑÐ¸ÑÐµÑ ÐÐµÑÑÐ° ÐÐµÐ»Ð¸ÐºÐ¾Ð³Ð¾
Year: 2020
Subjects: Ð¿Ð¾Ð»Ð¸Ð³ÐµÐ½Ð½Ð°Ñ Ð°Ð´Ð°Ð¿ÑÐ°ÑÐ¸Ñ
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Ð¿Ð¾Ð¿ÑÐ»ÑÑÐ¸Ð¾Ð½Ð½Ð°Ñ Ð³ÐµÐ½Ð¾Ð¼Ð¸ÐºÐ°
polygenic adaptation
chickpea
population genomics

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description: The subject of this study is polygenic adaptation signals and the aim of the work is to develop a system of programs that allows one to search for polygenic adaptation signals taking into account the heterogeneous evolutionary history of individual genomes. Thus, it is necessary to be able to analyze such signals in a sliding window on the chromosome, and none of the existing methods allow it. The system is based on two existing packages: for admixture graphs constructing and for searching for adaptation signals and their place on the admixture graphâs branches. As a result, a shell was written for these packages using the python and bash languages, which allows to perform analysis in a sliding window. The system was applied to the genome data of 10 chickpea populations taken from the collection of chickpeas of the All-Russian Institute of Plant Genetic Resources named after N.I. Vavilov (VIR), and as a result positions of polygenic adaptation signals in the genome were obtained and their places of origin in evolutionary history of populations were defined.