cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
MOESM5 of Effectiveness of pregnant womenâ s active participation in their antenatal care for the control of malaria and anaemia in pregnancy in Ghana: a cluster randomized controlled trial
Creators: name: Gifty Ampofo
name: Tagbor, Harry
name: Bates, Imelda
Publisher: name: figshare
Year: 2018
Subjects: Cell Biology
Neuroscience
Biotechnology
Developmental Biology
Science Policy
Computational Biology

description: Additional file 5: Box S1. Assessment of level of knowledge about malaria and anaemia in pregnancy.
An Evolving Entropy Floor in the Intracluster Gas?
Creators: name: Fang, Wenjuan
name: Haiman, Zoltan
Publisher: name: arXiv
Year: 2007
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Non-gravitational processes, such as feedback from galaxies and their active nuclei, are believed to have injected excess entropy into the intracluster gas, and therefore to have modified the density profiles in galaxy clusters during their formation. Here we study a simple model for this so-called preheating scenario, and ask (i) whether it can simultaneously explain both global X-ray scaling relations and number counts of galaxy clusters, and (ii) whether the amount of entropy required evolves with redshift. We adopt a baseline entropy profile that fits recent hydrodynamic simulations, modify the hydrostatic equilibrium condition for the gas by including approx. 20% non-thermal pressure support, and add an entropy floor K_0 that is allowed to vary with redshift. We find that the observed luminosity-temperature (L-T) relations of low-redshift (z=0.05) HIFLUGCS clusters and high-redshift (z=0.8) WARPS clusters are best simultaneously reproduced with an evolving entropy floor of K_0(z)=341(1+z)^{-0.83}h^{-1/3} keV cm^2. If we restrict our analysis to the subset of bright (kT > 3 keV) clusters, we find that the evolving entropy floor can mimic a self-similar evolution in the L-T scaling relation. This degeneracy with self-similar evolution is, however, broken when (0.5 < kT < 3 keV) clusters are also included. The approx. 60% entropy increase we find from z=0.8 to z=0.05 is roughly consistent with that expected if the heating is provided by the evolving global quasar population. Using the cosmological parameters from the WMAP 3-year data with sigma_8=0.76, our best-fit model underpredicts the number counts of the X-ray galaxy clusters compared to those derived from the 158 deg^2 ROSAT PSPC survey. Treating sigma_8 as a free parameter, we find a best-fit value of sigma_8=0.80+/- 0.02.
description: 14 emulateapj pages with 9 figures, submitted to ApJ
Harmonic aspects in an $η$-Ricci soliton
Creators: name: Blaga, Adara M.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Differential Geometry (math.DG)
subject: FOS: Mathematics
subject: 35C08, 53C25

description: We characterize $η$-Ricci solitons $(g,ξ,λ,μ)$ in some special cases when the $1$-form $η$, which is the $g$-dual of $ξ$, is a harmonic or a Schrödinger-Ricci harmonic form. We also provide necessary and sufficient conditions for $η$ to be a solution of the Schrödinger-Ricci equation and point out the relation between the three notions in our context. In particular, we apply these results to a perfect fluid spacetime and using Bochner- Weitzenböck techniques, we formulate some more conclusions for gradient solitons and deduce topological properties of the manifold and its universal covering.
description: 17 pages
Additional file 2 of Can the anatomy of abnormal flowers elucidate relationships of the androecial members in the ginger (Zingiberaceae)?
Creators: name: Li, Xiumei
name: Fan, Tian
name: Zou, Pu
name: Zhang, Wenhu
name: Wu, Xiuju
name: Zhang, Yixin
name: Liao, Jingping
Publisher: name: figshare
Year: 2020
Subjects: subject: Space Science
subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Ecology
subject: Developmental Biology
subject: Cancer
subject: Virology

description: Additional file 2: Fig. S1. Floral diagrams to illustrate researchers’ perspective about the relationship of the epigynous glands (G), labellum (L), and lateral staminodes (LS) in two androecial whorls. It is modified from Rao (1963). a, Payer’s view. b, Brown’s view. c, Gregory’s view. d, Thompson s view. Fig. S2. Comparison of pairwise, uncorrected transition (s) and transversion (v) distances (y-axis) with pairwise, model-corrected distances (x-axis) for the ITS, ETS, TRN, CAM and RPLN loci. Fig. S3. Bayesian inference generated a topology based on ITS, ETS, TRN, CAM and RPLN combine site
Accounting For Anger: A Thematic Analysis of Participants’ Understanding Of Anger After Undertaking Anger Management
Creators: name: Taverner, Ann
Publisher: name: University of East London
Year: 2021
Subjects: Anger
social constructionist
discourse

description: This study examined participant’s accounts, understandings of and relationships with anger after having undertaken some form of participant-identified anger management intervention with an NHS or other service provider in the UK. Whilst previous research in this domain has produced many useful findings, these studies have been predominantly conducted from a positivist perspective. As such, in these studies, participant responses had been constrained via forced-choice questionnaire formats; their responses had been reduced to simple ‘yes/no’ or other quantitative measures and their ability to engage with the topic area in spontaneous, flexible, and ecologically valid ways had been curtailed. In positivist studies participants are not able to argue, debate or engage with the topic area in any meaningful way. As such, our knowledge of their experience and understanding of issues is limited by the methods used to gain that knowledge. In this study six semi-structured one-to-one interviews were conducted asking open questions, seeking to explore, amongst other issues, participants’ relationship with anger. A social constructionist Thematic Analysis (Braun and Clarke, 2006) was conducted on the interview data. The thematic analysis yielded four superordinate themes and several subthemes. The superordinate themes were: Constructions of anger linked to perceptions of control in relationships; Constructions of anger linked to perceptions of trust in relationships; Constructions of anger linked to perceptions of emotional distress in relationships and Constructions of anger linked to perceptions of incongruence between relationship experiences. Overall, the four superordinate themes revealed how all the participants appeared to struggle with unproblematically articulating, verbally expressing their experiences of their anger, or indeed any form of emotional distress, as it occurs, in relation to themselves or other people. The findings suggest that undergoing anger management training or aiding per se, does not appear to help participants with being able to unproblematically appraise, articulate, or clarify these emotions. However, anger management may help in other domains. The findings are discussed in relation to policy, education, and health systems. Limitations of this study are also discussed. Suggestions for future research include moving away from realist thematic analysis methods and using more relativist critical psychology approaches, utilising various social media platforms, in research.
Theoretical considerations on multiparton interactions in QCD
Creators: name: Diehl, Markus
name: Schafer, Andreas
Publisher: name: arXiv
Year: 2011
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We investigate several ingredients for a theory of multiple hard scattering in hadron-hadron collisions. Issues discussed include the space-time structure of multiple interactions, their power behavior, spin and color correlations, interference terms, scale evolution and Sudakov logarithms. We discuss possibilities to constrain multiparton distributions by lattice calculations and by connecting them with generalized parton distributions. We show that the behavior of two-parton distributions at small interparton distances leads to problems with ultraviolet divergences and with double counting, which requires modification of the presently available theoretical framework.
description: 19 pages, 8 figures. v2: small corrections and improvements, added references
Statistical Mechanics Basis of Macleod Formula
Creators: name: Boudh-Hir, M. -E.
name: Mansoori, G. A.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Chemical Physics (physics.chem-ph)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: In this work the theoretical basis for the famous formula of Macleod, relating the surface tension of a liquid in equilibrium with its own vapor to the one-particle densities in the two phases of the system, is derived. Using the statistical- mechanical definition of the surface tension, it is proved that this property is, at the first approximation, given by the Macleod formula.
description: 9 pages
title: ADCO, Cartulaire de Cîteaux pour le prieuré de Gilly : rachat de la rente due à Saint-Germain-des-Prés (c. 1501), Cart. 194 (11 H 636), 64 folios, f. 0054
Creators: name: de la Côte d'Or, Archives départementales
name: CG21/F.PETOT/2015
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: cartulaire
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge

description: Cartulaire de Cîteaux pour le prieuré de Gilly : rachat de la rente due à Saint-Germain-des-Prés (c. 1501), Archives départementales de la Côte-d'Or, Cart. 194 (11 H 636), 64 folios, f. 0054, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire de Cîteaux pour le prieuré de Gilly : rachat de la rente due à Saint-Germain-des-Prés (c. 1501), Archives départementales de la Côte-d'Or, Cart. 194 (11 H 636), 64 folios, f. 0054, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
Analysis of bimodality in histograms formed from GALLEX and GNO solar neutrino data
Creators: name: Sturrock, P. A.
Publisher: name: arXiv
Year: 2007
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: A histogram display of the solar neutrino capture-rate measurements made by the GALLEX experiment appears to be bimodal, but that of the follow-on GNO experiment does not. To assess the significance of these results, we introduce a "bimodality index" based on the probability-transform procedure. This confirms that the GALLEX measurements are indeed bimodal (at the 99.98 percent confidence level), and that the GNO measurements are not. Tracking the bimodality index as a function of time shows that the strongest contribution to bimodality comes from runs 42 to 62, i.e. from the time interval 1995.1 to 1996.9. The bimodality index for the first half (runs 1 through 33) is 2.56, whereas that for the second half (runs 33 through 65) is 7.05. Power-spectrum analysis shows a similar distinction: the peaks in the power spectrum formed from the second half are stronger than those in the power spectrum formed from the first half, suggesting that bimodality and rotational modulation are related.
description: 14 pages, 8 figures
Mixed Voltage Angle and Frequency Droop Control for Transient Stability of Interconnected Microgrids with Loss of PMU Measurements
Creators: name: Sivaranjani, S
name: Agarwal, Etika
name: Xie, Le
name: Gupta, Vijay
name: Antsaklis, Panos
Publisher: name: arXiv
Year: 2018
Subjects: subject: Systems and Control (eess.SY)
subject: Optimization and Control (math.OC)
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: FOS: Mathematics

description: We consider the problem of guaranteeing transient stability of a network of interconnected angle droop controlled microgrids, where voltage phase angle measurements from phasor measurement units (PMUs) may be lost, leading to poor performance and instability. In this paper, we propose a novel mixed voltage angle and frequency droop control (MAFD) framework to improve the reliability of such angle droop controlled microgrid interconnections. In this framework, when the phase angle measurement is lost at a microgrid, conventional frequency droop control is temporarily used for primary control in place of angle droop control. We model the network of interconnected microgrids with the MAFD architecture as a nonlinear switched system. We then propose a dissipativity-based distributed secondary control design to guarantee transient stability of this network under arbitrary switching between angle droop and frequency droop controllers. We demonstrate the performance of this control framework by simulation on a test 123-feeder distribution network.
description: American Control Conference (ACC), 2020
MOESM5 of Mitochondrial genome variation of Atlantic cod
Creators: name: JĂ¸Rgensen, Tor
name: BĂĽrd Karlsen
name: Ă Se Emblem
name: Breines, Ragna
name: Andreassen, Morten
name: Rounge, Trine
name: Nederbragt, Alexander
name: Kjetill Jakobsen
name: Nymark, Marianne
name: Ursvik, Anita
name: Coucheron, Dag
name: Jakt, Lars
name: Nordeide, Jarle
name: Moum, Truls
name: Johansen, Steinar
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 5: Figure S1. Complete secondary structure diagram of Atlantic cod mitochondrial small subunit rRNA. Variable positions among the 124 complete Atlantic cod mitogenomes are indicated, as well as frequency (%) and variable sites (red boxes).
Large Higgs-electron Yukawa coupling in 2HDM
Creators: name: Dery, Avital
name: Frugiuele, Claudia
name: Nir, Yosef
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The present upper bound on $κ_e$, the ratio between the electron Yukawa coupling and its Standard Model value, is of ${\cal O}(600)$. We ask what would be the implications in case that $κ_e$ is close to this upper bound. The simplest extension that allows for such enhancement is that of two Higgs doublet models (2HDM) without natural flavor conservation. In this framework, we find the following consequences: (i) Under certain conditions, measuring $κ_e$ and $κ_V$ would be enough to predict values of Yukawa couplings for other fermions and for the $H$ and $A$ scalars. (ii) In the case that the scalar potential has a softly broken $Z_2$ symmetry, the second Higgs doublet must be light, but if there is hard breaking of the symmetry, the second Higgs doublet can be much heavier than the electroweak scale and still allow the electron Yukawa coupling to be very different from its SM value. (iii) CP must not be violated at a level higher than ${\cal O}(0.01/κ_e)$ in both the scalar potential and the Yukawa sector. (iv) LHC searches for $e^+e^-$ resonances constrain this scenario in a significant way. Finally, we study the implications for models where one of the scalar doublets couples only to the first generation, or only to the third generation.
description: 14 pages, 2 figures
Saturation of front propagation in a reaction-diffusion process describing plasma damage in porous low-k materials
Creators: name: Safaverdi, Soghra
name: Barkema, Gerard T.
name: Kunnen, Eddy
name: Urbanowicz, Adam M.
name: Maes, Christian
Publisher: name: arXiv
Year: 2011
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We propose a three-component reaction-diffusion system yielding an asymptotic logarithmic time-dependence for a moving interface. This is naturally related to a Stefan-problem for which both one-sided Dirichlet-type and von Neumann-type boundary conditions are considered. We integrate the dependence of the interface motion on diffusion and reaction parameters and we observe a change from transport behavior and interface motion \sim t^1/2 to logarithmic behavior \sim ln t as a function of time. We apply our theoretical findings to the propagation of carbon depletion in porous dielectrics exposed to a low temperature plasma. This diffusion saturation is reached after about 1 minute in typical experimental situations of plasma damage in microelectronic fabrication. We predict the general dependencies on porosity and reaction rates.
description: Accepted for publication in Phys. Rev. B
title: ADCO, Cartulaire de Cîteaux pour les possessions de Saulon-la-Chapelle et Saulon-la-Rue, Fénay, Noiron et la rivière Cent-fonds (XVe siècle), Cart. 179 (11 H 1075), 70 folios, f. 0142
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2015
name: Petot, Frédéric
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: cartulaire

description: Cartulaire de Cîteaux pour les possessions de Saulon-la-Chapelle et Saulon-la-Rue, Fénay, Noiron et la rivière Cent-fonds (XVe siècle), Archives départementales de la Côte-d'Or, Cart. 179 (11 H 1075), 70 folios, f. 0142, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire de Cîteaux pour les possessions de Saulon-la-Chapelle et Saulon-la-Rue, Fénay, Noiron et la rivière Cent-fonds (XVe siècle), Archives départementales de la Côte-d'Or, Cart. 179 (11 H 1075), 70 folios, f. 0142, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
Search for pulsars and transients with the GMRT
Creators: name: Bhattacharyya, Bhaswati
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Physical sciences

description: This paper details on the discovery of 21 pulsars using the Giant Metrewave Radio Telescope (GMRT) from targeted (Fermi directed search) and blind surveys (GMRT High Resolution Southern Sky - GHRSS) and results from the follow up studies. We discovered seven millisecond pulsars (MSPs) in the Fermi directed searches, which are the first Galactic MSPs discovered with the GMRT. We have discovered 13 pulsars (including a MSP and two mildly recycled pulsars) with the GHRSS survey, which is an off-Galactic-plane survey at 322 MHz with complementary target sky (declination range -40 deg to -54 deg) to other ongoing low-frequency surveys by GBT and LOFAR. The simultaneous time-domain and imaging study for localising pulsars and transients and efficient candidate investigation with machine learning are some of the features of the GHRSS survey, which are also finding application in the SKA design methodology.
description: 4 pages, 2 figures and 1 table accepted for publication in the proceedings of IAU Symposium 337 - Pulsar Astrophysics: The Next Fifty Years
title: Atelier du numérique: Création et fonctionnement d'un MOOC: collaboration enseignants et bibliothécaires
Creators: name: LabexMed
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2019

description: Affiche de l'atelier du numérique : Création et fonctionnement d'un MOOC: collaboration enseignants et bibliothécaires
MOESM4 of Effectiveness of pregnant women’s active participation in their antenatal care for the control of malaria and anaemia in pregnancy in Ghana: a cluster randomized controlled trial
Creators: name: Gifty Ampofo
name: Tagbor, Harry
name: Bates, Imelda
Publisher: name: figshare
Year: 2018
Subjects: subject: Cell Biology
subject: Neuroscience
subject: Pharmacology
subject: Biotechnology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 4: Table S2. Checklist for the pregnant women’s report of the ‘client participation’ intervention.
Optical identifications of high-redshift galaxy clusters from Planck Sunyaev-Zeldovich survey
Creators: name: Burenin, R. A.
name: Bikmaev, I. F.
name: Khamitov, I. M.
name: Zaznobin, I. A.
name: Khorunzhev, G. A.
name: Eselevich, M. V.
name: Afanasyev, V. L.
name: Dodonov, S. N.
name: Rubiño-Martín, J. A.
name: Aghanim, N.
name: Sunyaev, R. A.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We present the results of optical identifications and spectroscopic redshifts measurements for galaxy clusters from 2-nd Planck catalogue of Sunyaev-Zeldovich sources (PSZ2), located at high redshifts, $z\approx0.7-0.9$. We used the data of optical observations obtained with Russian-Turkish 1.5-m telescope (RTT150), Sayan observatory 1.6-m telescope, Calar Alto 3.5-m telescope and 6-m SAO RAS telescope (Bolshoi Teleskop Alt-azimutalnyi, BTA). Spectroscopic redshift measurements were obtained for seven galaxy clusters, including one cluster, PSZ2 G126.57+51.61, from the cosmological sample of PSZ2 catalogue. In central regions of two clusters, PSZ2 G069.39+68.05 and PSZ2 G087.39-34.58, the strong gravitationally lensed background galaxies are found, one of them at redshift $z=4.262$. The data presented below roughly double the number of known galaxy clusters in the second Planck catalogue of Sunyaev-Zeldovich sources at high redshifts, $z\approx0.8$.
description: 12 pages, 9 figures. Accepted for publication in Astronomy Letters
The Health Care System in Benin
Creators: name: Degila, Dêlidji Eric
name: Damien, Barikissou Georgia
Publisher: name: Universität Bremen
Year: 2024
Subjects: subject: Benin
subject: health
subject: health care
subject: health care system
subject: 300

description: This country report provides a description of the emergence of a health care system under public responsibility in Benin. The inception of the health care system refers to the first legislation stipulating entitlements to medical care. The report also includes a brief description of major health care reforms, and the current organization of the health care system in Benin. This report is part of the CRC 1342 Social Policy Country Briefs Series.
Recent developments from the loop-tree duality
Creators: name: Rodrigo, German
name: Driencourt-Mangin, Felix
name: Sborlini, German F. R.
name: Hernandez-Pinto, Roger J.
Publisher: name: arXiv
Year: 2018
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: In this talk, we review the most recent developments of the four-dimensional unsubstraction (FDU) and loop-tree duality (LTD) methods. In particular, we make emphasis on the advantages of the LTD formalism regarding asymptotic expansions of loop integrands.
description: 8 pages, 1 figure. Presented at 13th International Symposium on Radiative Corrections RADCOR2017, 24-29 September 2017, St. Gilgen, Austria
Regularity in a one-phase free boundary problem for the fractional Laplacian
Creators: name: De Silva, Daniela
name: Roquejoffre, Jean-Michel
Publisher: name: arXiv
Year: 2011
Subjects: subject: Analysis of PDEs (math.AP)
subject: FOS: Mathematics

description: For a one-phase free boundary problem involving a fractional Laplacian, we prove that "flat free boundaries" are $C^{1,α}$. We recover the regularity results of Caffarelli for viscosity solutions of the classical Bernoulli-type free boundary problem with the standard Laplacian.
description: Corrected some typos
Decay of the de Sitter Vacuum
Creators: name: Anderson, Paul R.
name: Mottola, Emil
name: Sanders, Dillon H.
Publisher: name: arXiv
Year: 2017
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The decay rate of the Bunch-Davies state of a massive scalar field in the expanding flat spatial sections of de Sitter space is determined by an analysis of the particle pair creation process in real time. The Feynman definition of particle and antiparticle Fourier mode solutions of the scalar wave equation, and their adiabatic phase analytically continued to the complexified time domain, show conclusively that the Bunch-Davies state is not the vacuum state at late times. The closely analogous creation of charged particle pairs in a uniform electric field is reviewed and Schwinger's result for the vacuum decay rate is recovered by the real time analysis. The vacuum decay rate in each case is also calculated by switching the background field on adiabatically, allowing it to act for a very long time, and then adiabatically switching it off again. In both the uniform electric field and de Sitter cases the particles created while the field is switched on are verified to be real, in the sense that they persist in the final asymptotic flat zero-field region. In the de Sitter case there is an interesting residual dependence of the rate on how the de Sitter phase is ended, indicating a greater sensitivity to spatial boundary conditions. The electric current of the created particles in the E-field case and their energy density and pressure in the de Sitter case are also computed, and the magnitude of their backreaction effects on the background field estimated. Possible consequences of the Hubble scale instability of the de Sitter vacuum for cosmology, vacuum dark energy, and the cosmological `constant' problem are discussed.
description: 46 pages, 17 figures
Virtual screening, molecular dynamics, density functional theory and quantitative structure activity relationship studies to design peroxisome proliferator-activated receptor-γ agonists as anti-diabetic drugs
Creators: name: Ahmed, Sinthyia
name: Islam, Nazrul
name: Shahinozzaman, Md
name: Fakayode, Sayo O.
name: Afrin, Nadia
name: Halim, Mohammad A.
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Biophysics
subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Computational Biology

description: Type 2 diabetes (T2D) is generally characterized by elevated blood glucose levels, insulin resistance, and relative lack of insulin; however, insulin resistance is the predominant risk factor. Hence, the use of insulin sensitizer drugs to increase insulin sensitivity has gained immense interest as an attractive treatment option for T2D and their major target is a nuclear receptor PPAR-γ (peroxisome proliferator-activated receptor-γ). A wide range of synthetic insulin sensitizers such as thiazolidinedione act as PPAR-γ agonists thereby enhancing insulin action and improving hyperglycemia in patients. Nonetheless, they pose severe adverse effects for human, necessitating an emergent need to develop effective insulin sensitizer drugs. Herein, virtual screening of 10,000 ligands is performed and the best five ligands are identified. MET364, ILE341, CYS285, ALA292, PHE282, and LEU330 residues are found to play an important role in ligand binding. It is shown from the molecular dynamics simulations results of the top-ranked ligands that increased numbers of hydrogen bonds are formed with PPAR-γ catalytic residues. Quantum chemical calculations reveal that all the best ligands can demonstrate good thermodynamic stability and pharmacokinetic properties. Partial-least-square (PLS) regression of quantitative structural activity relationship (QSAR) is utilized to model and predict the binding energy for ligands. Principal component analysis is further explored for the best ligands’ QSAR pattern recognition. Importantly, the predicted values of the binding energy of the potential ligands by the PLS regression is favourably compared with the values of binding energy obtained from molecular docking with incredible high accuracy of 98%.
Observation of Berry's Phase in a Solid State Qubit
Creators: name: Leek, P. J.
name: Fink, J. M.
name: Blais, A.
name: Bianchetti, R.
name: Göppl, M.
name: Gambetta, J. M.
name: Schuster, D. I.
name: Frunzio, L.
name: Schoelkopf, R. J.
name: Wallraff, A.
Publisher: name: arXiv
Year: 2007
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Superconductivity (cond-mat.supr-con)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: In quantum information science, the phase of a wavefunction plays an important role in encoding information. While most experiments in this field rely on dynamic effects to manipulate this information, an alternative approach is to use geometric phase, which has been argued to have potential fault tolerance. We demonstrate the controlled accumulation of a geometric phase, Berry's phase, in a superconducting qubit, manipulating the qubit geometrically using microwave radiation, and observing the accumulated phase in an interference experiment. We find excellent agreement with Berry's predictions, and also observe a geometry dependent contribution to dephasing.
description: 5 pages, 4 figures, version with high resolution figures available at http://qudev.ethz.ch/content/science/PubsPapers.html
Affected-embryo-based SNP haplotyping with NGS for the preimplantation genetic testing of Marfan syndrome
Creators: name: Deng, Yu
name: Ou, Zhanhui
name: Li, Ru
name: Chen, Zhiheng
name: Liang, Peiling
name: Sun, Ling
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology

description: Marfan syndrome (MFS), an autosomal dominant heritable disease of the connective tissue, is characterized by broad clinical manifestations in the musculoskeletal, cardiovascular, pulmonary, and ocular systems. In this study, a male patient with MFS caused by a heterozygous mutation NM_000138.5(FBN1):c.6037 + 2 T > C in the fibrillin 1 gene (FBN1) underwent preimplantation genetic testing (PGT) by using affected-embryo-based single nucleotide polymorphism (SNP) haplotyping. Multiple displacement amplification was used for whole genome amplification of biopsied trophectoderm cells after controlled ovarian stimulation. Sanger sequencing and next-generation sequencing (NGS) were used to detect the state of FBN1 mutation. A total of 14 blastocysts formed after intracytoplasmic sperm injection were biopsied. After NGS, 60 informative polymorphic SNP markers located upstream and downstream of the FBN1 gene and its pathogenic mutation site were linked to individual alleles. Sanger sequencing further confirmed that 8 blastocysts carried the mutation NM_000138.5(FBN1):c.6037 + 2 T > C, while 6 did not. Four of the non-carriers were euploid verified by copy number variation results. A female infant without MFS was born at 37 weeks gestation after a subsequent frozen embryo transfer. In conclusion, the successful case indicates that SNP haplotyping using sibling embryos as a reference is applicable to PGT in monogenetic diseases. Abbreviations MFS: Marfan syndrome; PGT: preimplantation genetic testing; FBN1: fibrillin 1 gene; NGS: next-generation sequencing; SNP: single nucleotide polymorphism.
Additional file 3: of dropEst: pipeline for accurate estimation of molecular counts in droplet-based single-cell RNA-seq experiments
Creators: name: Petukhov, Viktor
name: Jimin Guo
name: Ninib Baryawno
name: Severe, Nicolas
name: Scadden, David
name: Samsonova, Maria
name: Kharchenko, Peter
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Computational Biology

description: Example of the report, generated by the pipeline. (PDF 544Â kb)
A Gaussian mixture ensemble transform filter
Creators: name: Reich, Sebastian
Publisher: name: arXiv
Year: 2011
Subjects: subject: Probability (math.PR)
subject: Numerical Analysis (math.NA)
subject: FOS: Mathematics
subject: 93E11, 34F05, 65C60

description: We generalize the popular ensemble Kalman filter to an ensemble transform filter where the prior distribution can take the form of a Gaussian mixture or a Gaussian kernel density estimator. The design of the filter is based on a continuous formulation of the Bayesian filter analysis step. We call the new filter algorithm the ensemble Gaussian mixture filter (EGMF). The EGMF is implemented for three simple test problems (Brownian dynamics in one dimension, Langevin dynamics in two dimensions, and the three dimensional Lorenz-63 model). It is demonstrated that the EGMF is capable to track systems with non-Gaussian uni- and multimodal ensemble distributions.
Scalable Graphene Aptasensors for Drug Quantification
Creators: name: Vishnubhotla, Ramya
name: Ping, Jinglei
name: Gao, Zhaoli
name: Lee, Abigail
name: Saouaf, Olivia
name: Vrudhula, Amey
name: Johnson, A. T. Charlie
Publisher: name: arXiv
Year: 2017
Subjects: subject: Applied Physics (physics.app-ph)
subject: FOS: Physical sciences

description: Simpler and more rapid approaches for therapeutic drug-level monitoring are highly desirable to enable use at the point-of-care. We have developed an all-electronic approach for detection of the HIV drug tenofovir based on scalable fabrication of arrays of graphene field-effect transistors (GFETs) functionalized with a commercially available DNA aptamer. The shift in the Dirac voltage of the GFETs varied systematically with the concentration of tenofovir in deionized water, with a detection limit less than 1 ng/mL. Tests against a set of negative controls confirmed the specificity of the sensor response. This approach offers the potential for further development into a rapid and convenient point-of-care tool with clinically relevant performance.
description: 7 pages, 2 figures
Additional file 3: of Gene flow and adaptive potential in a generalist ectoparasite
Creators: name: AnaĂŻs Appelgren
name: Saladin, Verena
name: Richner, Heinz
name: Doligez, Blandine
name: McCoy, Karen
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences

description: This file contains graphs representing the isolation by distance within each patch, not considering host-associated structure (PDF 86 kb).
Polarized point sources in the LOFAR Two-meter Sky Survey: A preliminary catalog
Creators: name: Van Eck, C. L.
name: Haverkorn, M.
name: Alves, M. I. R.
name: Beck, R.
name: Best, P.
name: Carretti, E.
name: Chyży, K. T.
name: Farnes, J. S.
name: Ferrière, K.
name: Hardcastle, M. J.
name: Heald, G.
name: Horellou, C.
name: Iacobelli, M.
name: Jelić, V.
name: Mulcahy, D. D.
name: O'Sullivan, S. P.
name: Polderman, I. M.
name: Reich, W.
name: Riseley, C. J.
name: Röttgering, H.
name: Schnitzeler, D. H. F. M.
name: Shimwell, T. W.
name: Vacca, V.
name: Vink, J.
name: White, G. J.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: The polarization properties of radio sources at very low frequencies (<200 MHz) have not been widely measured, but the new generation of low-frequency radio telescopes, including the Low Frequency Array (LOFAR: a Square Kilometre Array Low pathfinder), now gives us the opportunity to investigate these properties. In this paper, we report on the preliminary development of a data reduction pipeline to carry out polarization processing and Faraday tomography for data from the LOFAR Two-meter Sky Survey (LOTSS) and present the results of this pipeline from the LOTSS preliminary data release region (10h45m - 15h30m right ascension, 45 - 57 degrees declination, 570 square degrees). We have produced a catalog of 92 polarized radio sources at 150 MHz at 4.3 arcminute resolution and 1 mJy rms sensitivity, which is the largest catalog of polarized sources at such low frequencies. We estimate a lower limit to the polarized source surface density at 150 MHz, with our resolution and sensitivity, of 1 source per 6.2 square degrees. We find that our Faraday depth measurements are in agreement with previous measurements and have significantly smaller errors. Most of our sources show significant depolarization compared to 1.4 GHz, but there is a small population of sources with low depolarization indicating that their polarized emission is highly localized in Faraday depth. We predict that an extension of this work to the full LOTSS data would detect at least 3400 polarized sources using the same methods, and probably considerably more with improved data processing.
description: 20 pages, 8 figures, 2 catalog tables (non-machine readable), accepted for publication in A&A
Euclidean and hyperbolic lenghs of images of arcs
Creators: name: Beardon, A. F.
name: Carne, T. K.
Publisher: name: arXiv
Year: 2007
Subjects: subject: Complex Variables (math.CV)
subject: FOS: Mathematics
subject: 30F45 (Primary); 30C45, 30C25 (Secondary)

description: Let $f$ be a function that is analytic in the unit disc. We give new estimates, and new proofs of existing estimates, of the Euclidean length of the image under $f$ of a radial segment in the unit disc. Our methods are based on the hyperbolic geometry of plane domains, and we address some new questions that follow naturally from this approach.
description: 26 pages
The role of strangeness and isospin in low density expansions of hadronic matter
Creators: name: de Oliveira, Thamirys
name: Menezes, Débora P.
name: Pinto, Marcus B.
name: Gulminelli, Francesca
Publisher: name: arXiv
Year: 2017
Subjects: subject: Nuclear Theory (nucl-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We compare relativistic mean field models with their low density expansion counterparts used to mimic non-relativistic models by consistently expanding the baryonic scalar density in powers of the baryonic number density up to ${\cal O}(13/3)$, which goes two orders beyond the order considered in previous works. We show that, due to the non-trivial density dependence of the Dirac mass, the convergence of the expansion is very slow, and the validity of the non-relativistic approximation {\bf is} questionable even at subsaturation densities. In order to analyze the roles played by strangeness and isospin we consider $n-Λ$ and $n-p$ matter separately. Our results indicate that these degrees of freedom play quite different roles in the expansion mechanism and $n-Λ$ matter can be better described by low density expansions than $n-p$ matter in general.
description: 35 pages, 26 figures
Higher-order estimates for collapsing Calabi-Yau metrics
Creators: name: Hein, Hans-Joachim
name: Tosatti, Valentino
Publisher: name: arXiv
Year: 2018
Subjects: subject: Differential Geometry (math.DG)
subject: Analysis of PDEs (math.AP)
subject: Complex Variables (math.CV)
subject: FOS: Mathematics
subject: 53C55, 14J32, 32Q25, 58J05

description: We prove a uniform C^alpha estimate for collapsing Calabi-Yau metrics on the total space of a proper holomorphic submersion over the unit ball in C^m. The usual methods of Calabi, Evans-Krylov, and Caffarelli do not apply to this setting because the background geometry degenerates. We instead rely on blowup arguments and on linear and nonlinear Liouville theorems on cylinders. In particular, as an intermediate step, we use such arguments to prove sharp new Schauder estimates for the Laplacian on cylinders. If the fibers of the submersion are pairwise biholomorphic, our method yields a uniform C^infinity estimate. We then apply these local results to the case of collapsing Calabi-Yau metrics on compact Calabi-Yau manifolds. In this global setting, the C^0 estimate required as a hypothesis in our new local C^alpha and C^infinity estimates is known to hold thanks to earlier work of the second-named author.
description: 53 pages, small changes, final version to appear in the Cambridge Journal of Mathematics
title: ADCO, Cartulaire de Cîteaux pour la grange et seigneurie d'Ouges (XVe siècle), Cart. 173 (11 H 939), 226 folios, f. 0379
Creators: name: de la Côte d'Or, Archives départementales
name: CG21/F.PETOT/2015
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: cartulaire
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge

description: Cartulaire de Cîteaux pour la grange et seigneurie d'Ouges (XVe siècle), Archives départementales de la Côte-d'Or, Cart. 173 (11 H 939), 226 folios, f. 0379, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire de Cîteaux pour la grange et seigneurie d'Ouges (XVe siècle), Archives départementales de la Côte-d'Or, Cart. 173 (11 H 939), 226 folios, f. 0379, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
description: Provenance: https://www.geonames.org/3024876
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
Proteomics based drug repositioning applied to improve in vitro fertilization implantation: an artificial intelligence model
Creators: name: Matorras, Roberto
name: Valls, Raquel
name: Azkargorta, Mikel
name: Burgos, Jorge
name: Rabanal, Aintzane
name: Elortza, Felix
name: Mas, Jose Manuel
name: Sardon, Teresa
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: Biophysics
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Science Policy
subject: Hematology

description: Embryo implantation is one of the most inefficient steps in assisted reproduction, so the identifying drugs with a potential clinical application to improve it has a strong interest. This work applies artificial intelligence and systems biology-based mathematical modeling strategies to unveil potential treatments by computationally analyzing and integrating available molecular and clinical data from patients. The mathematical models of embryo implantation computationally generated here simulate the molecular networks underneath this biological process. Once generated, these models were analyzed in order to identify potential repositioned drugs (drugs already used for other indications) able to improve embryo implantation by modulating the molecular pathways involved. Interestingly, the repositioning analysis has identified drugs considering two endpoints: (1) drugs able to modulate the activity of proteins whose role in embryo implantation is already bibliographically acknowledged, and (2) drugs that modulate key proteins in embryo implantation previously predicted through a mechanistic analysis of the mathematical models. This second approach increases the scope open for examination and potential novelty of the repositioning strategy. As a result, a list of 23 drug candidates to improve embryo implantation after IVF was identified by the mathematical models. This list includes many of the compounds already tested for this purpose, which reinforces the predictive capacity of our approach, together with novel repositioned candidates (e.g., Infliximab, Polaprezinc, and Amrinone). In conclusion, the present study exploits existing molecular and clinical information to offer new hypotheses regarding molecular mechanisms in embryo implantation and therapeutic candidates to improve it. This information will be very useful to guide future research. Abbreviations: IVF: in vitro fertilization; EI: Embryo implantation; TPMS: Therapeutic Performance Mapping System; MM: mathematical models; ANN: Artificial Neuronal Networks; TNFα: tumour necrosis factor factor-alpha; HSPs: heat shock proteins; VEGF: vascular endothelial growth factor; PPARA: peroxisome proliferator activated receptor-α PXR: pregnane X receptor; TTR: transthyretin; BED: Biological Effectors Database; MLP: multilayer perceptron
Best Match Graphs
Creators: name: Geiß, Manuela
name: Chavez, Edgar
name: Gonzalez, Marcos
name: Lopez, Alitzel
name: Stadler, Bärbel M. R.
name: Valdivia, Dulce I.
name: Hellmuth, Marc
name: Rosales, Maribel H.
name: Stadler, Peter F.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Combinatorics (math.CO)
subject: FOS: Mathematics

description: THIS IS A CORRECTED VERSION INCLUDING AN APPENDED CORRIGENDUM. Best match graphs arise naturally as the first processing intermediate in algorithms for orthology detection. Let $T$ be a phylogenetic (gene) tree $T$ and $σ$ an assignment of leaves of $T$ to species. The best match graph $(G,σ)$ is a digraph that contains an arc from $x$ to $y$ if the genes $x$ and $y$ reside in different species and $y$ is one of possibly many (evolutionary) closest relatives of $x$ compared to all other genes contained in the species $σ(y)$. Here, we characterize best match graphs and show that it can be decided in cubic time and quadratic space whether $(G,σ)$ derived from a tree in this manner. If the answer is affirmative, there is a unique least resolved tree that explains $(G,σ)$, which can also be constructed in cubic time.