cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Bail‐out treatment of pulmonary embolism using a large‐bore aspiration mechanical thrombectomy device
Creators: name: Stadler, Stefan
name: Debl, Kurt
name: Ritzka, Markus
name: Maier, Lars Siegfried
name: Sossalla, Samuel
Publisher: name: Universität Regensburg
Year: 2021
Subjects: subject: ; Pulmonary embolism; Large-bore aspiration mechanical thrombectomy device; FlowTriever; Veno-arterial ECMO
subject: 610 Medizin

description: We report on the first pulmonary embolism treatment via the large-bore aspiration mechanical thrombectomy device (Inari FlowTriever (R)) outside the USA, in a resuscitated patient on veno-arterial extracorporeal membrane oxygenation (VA-ECMO) suffering from severe and acute right heart failure. In this particular high-risk patient population, where thrombolysis is mostly not applicable, this new technology could be a promising solution as the combination of large-bore thrombus aspiration and extraction successfully removes large emboli. In our case, right ventricular function improved rapidly after the procedure, ECMO could be weaned, and the patient was dismissed 2 weeks after. In summary, we provide a new therapeutic option for the often difficult treatment of pulmonary embolism in high-risk patients on VA-ECMO.
Tránsito – Eduardo Manet – Autopsia de un film
Creators: name: Inconnu
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2024
Subjects: Cinéma
''Tránsito''

description: Analyse du film ''Tránsito'' d’Eduardo Manet.
description: Análisis de la película “Tránsito” de Eduardo Manet.
description: Notes : Article incomplet.
description: Titre de la publication : Cine Cubano
description: Périodicité : Trimestriel
description: Directeur de la publication : Guevara, Alfredo.
description: Source: EM-E1-1964-00-00a
description: Source: Localisation de la ressource : Centre de Recherches Latino-Américaines (CRLA–Archivos, ITEM UMR8132). MSHS - Bât. A5, 1er étage 5 rue Théodore Lefebvre - TSA21103. 86073 Poitiers cedex 9.
Additional file 2: Figure S2. of Aneuploidy screening of embryonic stem cell clones by metaphase karyotyping and droplet digital polymerase chain reaction
Creators: name: Codner, Gemma
name: Loic Lindner
name: Caulder, Adam
name: Wattenhofer-DonzĂŠ, Marie
name: Radage, Adam
name: Mertz, Annelyse
name: Eisenmann, Benjamin
name: MiannĂŠ, Joffrey
name: Evans, Edward
name: Beechey, Colin
name: Fray, Martin
name: Marie-Christine Birling
name: HĂŠrault, Yann
name: Pavlovic, Guillaume
name: Teboul, Lydia
Publisher: name: Figshare
Year: 2016
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Biotechnology
subject: Evolutionary Biology
subject: Developmental Biology
subject: Science Policy
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Quality of karyotype of JM8-derived clones is equivalent among distributing repositories. The figure shows the percentages of euploid clones sourced from the two main distributors of JM8-derived cells and GLT rate obtained with them. The numbers of clones in each instance is shown. These numbers illustrate that materials obtained from different distributors are of similar quality in terms of karyotype and GLT ability. Data was analysed using the Fisher Exact test that and showed no evidence of difference of quality between the two distributors. (PDF 77 kb)
Lachesilla bernardi Badonnel 1938
Creators: name: Georgiev, Dilian
Publisher: name: Zenodo
Year: 2018
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Psocodea
Lachesillidae
Lachesilla
Lachesilla bernardi

description: Lachesilla bernardi Badonnel, 1938
Material examined: 1 ♂, 23.5.2018, Sarnena Gora Mts., Hrishteni village, yard of a house, collected by sweeping of Corylus avellana leafs using a small plastic container (small bucket), N42 27 12.7 E25 42 18.9, 230 m a.s.l.; same locality: 1 ♂, 14.6.2018, collected by trapping with plastic containers below lamp during the night; 1 ♂, 29.6.2018, Sarnena Gora Mts., SW part of Hrishteni village, ruderal vegetation, collected by beating the vegetation, from Clemathis vitalba growing on a concrete wall, N42 27 00.0 E25 42 12.1, 222 m a.s.l.
description: Published as part of Georgiev, Dilian, 2018, Four species of Psocoptera as new records for Bulgaria, pp. 1-2 in ZooNotes 2018 (130) on page 1, DOI: 10.5281/zenodo.12658669
Additional file 1: of Comparing the coverage, recall, and precision of searches for 120 systematic reviews in Embase, MEDLINE, and Google Scholar: a prospective study
Creators: name: Bramer, Wichor
name: Giustini, Dean
name: Kramer, Bianca
Publisher: name: Figshare
Year: 2016
Subjects: subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Search strategies for published systematic reviews where the recall of Google Scholar was exeptionally good or poor. (DOCX 23Â kb)
Co-optimizing Consumption and EV Charging under Net Energy Metering
Creators: name: Jeon, Minjae
name: Tong, Lang
name: Zhao, Qing
Publisher: name: arXiv
Year: 2022
Subjects: subject: Systems and Control (eess.SY)
subject: FOS: Electrical engineering, electronic engineering, information engineering

description: We consider the co-optimization of flexible household consumption, electric vehicle charging, and behind-the-meter distributed energy resources under the net energy metering tariff. Using a stochastic dynamic programming formulation, we show that the solution to the dynamic programming co-optimization is a procrastination threshold policy that delays and minimizes electricity purchasing for EV charging in each time interval. The policy thresholds can be computed off-line, simplifying the continuous action space dynamic optimization to decoupled closed-form charging and consumption decisions. Empirical studies using renewable, consumption, and EV data demonstrate the benefits of co-optimization.
Co-optimizing Behind-The-Meter Resources under Net Metering
Creators: name: Alahmed, Ahmed S.
name: Tong, Lang
Publisher: name: arXiv
Year: 2022
Subjects: subject: Systems and Control (eess.SY)
subject: FOS: Electrical engineering, electronic engineering, information engineering

description: We consider the problem of co-optimizing behind-the-meter (BTM) storage and flexible demands with BTM stochastic renewable generation. Under a generalized net energy metering (NEM) policy-NEM X, we show that the optimal co-optimization policy schedules the flexible demands based on a load priority list that defers less prioritized loads to times when the BTM generation is abundant. This gives rise to the notion of a net-zero zone, which we quantify under different distributed energy resources (DER) compositions. We highlight the special case of inflexible demands that results in a storage policy that minimizes the imports and exports from and to the grid. Comparative statics are provided on the optimal co-optimization policy. Simulations using real residential data show the surplus gains of various customers under different DER compositions.
description: 8 pages, 4 figures, 4 tables
Connexin mRNA distribution in adult mouse kidneys
Creators: name: Geis, Lisa
name: Boudriot, Franz-Fabian
name: Wagner, Charlotte
Publisher: name: Universität Regensburg
Year: 2021
Subjects: subject: MEMBRANE GLYCOPROTEIN; CELL COMMUNICATION; ACTIN EXPRESSION; TUBULAR CELLS; GAP-JUNCTIONS; DIETARY SALT; LOCALIZATION; PROTEIN; PROGRESSION; Connexins; Gap junctions; Kidney; mRNA; RNAscope
subject: 570 Biowissenschaften, Biologie
subject: 610 Medizin

description: Kidneys are thought to express eight different connexin isoforms (i.e., Cx 26, 30, 32, 37, 40, 43, 45, and 46), which form either hemichannels or gap junctions serving to intercellular communication and functional synchronization. Proper function of connexins has already been shown to be crucial for regulation of renal hemodynamics and renin secretion, and there is also growing evidence for connexins to play a role in pathologic conditions such as renal fibrosis or diabetic nephropathy. Therefore, exact intrarenal localization of the different connexin isoforms gains particular interest. Until now intrarenal expression of connexins has mainly been examined by immunohistochemistry, which in part generated conflicting results depending on antibodies and fixation protocols used. In this work, we used fluorescent RNAscope as an alternative technical approach to localize renal connexin mRNAs in healthy mouse kidneys. Addition of RNAscope probes for cell type specific mRNAs was used to assign connexin mRNA signals to specific cell types. We hereby found Cx26 mRNA strongly expressed in proximal tubules, Cx30 mRNA was selectively detected in the urothelium, and Cx32 mRNA was found in proximal tubules and to a lesser extent also in collecting ducts. Cx37 mRNA was mainly associated with vascular endothelium, Cx40 mRNA was largely found in glomerular mesangial and less in vascular endothelial cells, Cx43 mRNA was sparsely expressed by interstitial cells of all kidney zones, and Cx45 mRNA was predominantly found in smooth muscle cell layers of both blood vessels and ureter as well as in mesangial and interstitial (fibroblastic) cells. Cx46 mRNA could not be detected. In summary our results essentially confirm previous data on connexin expression in the renal vasculature and in glomeruli. In addition, they demonstrate strong connexin gene expression in proximal tubules, and they suggest significant connexin expression in resident tubulointerstitial cells.
Effects of mechanical strain on periodontal ligament fibroblasts in presence of Aggregatibacter actinomycetemcomitans lysate
Creators: name: Schröder, Agnes
name: Stumpf, Julia
name: Paddenberg, Eva
name: Neubert, Patrick
name: Schatz, Valentin
name: Köstler, Josef
name: Jantsch, Jonathan
name: Deschner, James
name: Proff, Peter
name: Kirschneck, Christian
Publisher: name: Universität Regensburg
Year: 2021
Subjects: subject: ORTHODONTIC TOOTH MOVEMENT; ALVEOLAR BONE LOSS; CREVICULAR FLUID; REACTIVE OXYGEN; GLOBAL BURDEN; GROWTH-FACTOR; EXPRESSION; HEALTH; CYTOKINE; TISSUE; Periodontal ligament fibroblast; PDL; Orthodontic tooth movement; Periodontitis; Inflammation
subject: 610 Medizin

description: Purpose Many adult orthodontic patients suffer from periodontitis, which is caused by oral pathogens such as the gram-negative Aggregatibacter actinomycetemcomitans (Agac). Like orthodontic tooth movement, periodontitis is associated with inflammation and alveolar bone remodelling thereby affecting orthodontic treatment. Interactions of both processes, however, are not sufficiently explored, particularly with regard to oxidative stress. Methods After preincubation with Agac lysate for 24 h periodontal ligament fibroblasts (PDLF) were either stretched or compressed for further 48 h simulating orthodontic forces in vitro. We analysed the expression of genes and proteins involved in the formation of reactive oxygen species (NOX-4, ROS) and nitric oxide (NOS-2), inflammation (TNF, IL-6, PTGS-2) and bone remodelling (OPG, RANKL). Results Agac lysate elevated the expression of NOX-4, NOS-2, inflammatory IL-6 and PTGS-2 and the bone-remodelling RANKL/OPG ratio during compressive, but not tensile mechanical strain. Agac lysate stimulated pressure-induced inflammatory signalling, whereas surprisingly ROS formation was reduced. Pressure-induced downregulation of OPG expression was inhibited by Agac lysate. Conclusions Agac lysate impact on the expression of genes and proteins involved in inflammation and bone remodelling as well as ROS formation, when PDLF were subjected to mechanical forces occurring during orthodontic tooth movement.
Additional file 2: of Outcomes following the implementation of a quality control campaign to decrease sternal wound infections after coronary artery by-pass grafting
Creators: name: Lindblom, Rickard
name: Lytsy, Birgitta
name: SandstrĂśm, Camilla
name: Nadjira Ligata
name: Larsson, Beata
name: RansjĂś, Ulrika
name: Swenne, Christine
Publisher: name: Figshare
Year: 2015
Subjects: subject: Space Science
subject: Medicine
subject: Molecular Biology
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Questionnaire in English, translated. (DOCX 13Â kb)
Optimal Low-Thrust Orbit Transfers Connecting Gateway with Earth and Moon
Creators: name: Pozzi, Chiara
name: Pontani, Mauro
name: Beolchi, Alessandro
name: Fantino, Elena
Publisher: name: arXiv
Year: 2024
Subjects: subject: Optimization and Control (math.OC)
subject: Dynamical Systems (math.DS)
subject: FOS: Mathematics

description: Gateway will represent a primary logistic infrastructure in cislunar space. The identification of efficient orbit transfers capable of connecting Earth, Moon, and Gateway paves the way for enabling refurbishment, servicing, and utilization of this orbiting platform. This study is devoted to determining two-way minimum-time low-thrust orbit transfers that connect both Earth and Moon to Gateway. Backward time propagation is proposed as a very convenient option for trajectories that approach and rendezvous with Gateway, and a unified formulation is introduced for minimum-time orbit transfers, using either forward or backward propagation. Two-way transfers between Gateway and a specified low-altitude lunar orbit are first determined, using an indirect heuristic method, which employs the necessary conditions for optimality and a heuristic algorithm. Second, two-way orbit transfers that connect Earth and Gateway are addressed. Because these trajectories exist under the influence of two major attracting bodies, the underlying optimal control problem is formulated as a multi-arc trajectory optimization problem, involving three different representations for the spacecraft state. Multi-arc optimal control problems are associated with several corner conditions to be enforced at the junction time that separates distinct arcs. However, these conditions are shown to be solvable sequentially for the problem at hand, leveraging implicit costate transformation. This implies that the multi-arc problem has a set of unknown quantities with the same size as that of a single-arc optimal control problem, with apparent advantages of computational nature. The indirect heuristic method is also applied in this second mission scenario.
Additional file 1: of Reducing dementia risk by targeting modifiable risk factors in mid-life: study protocol for the Innovative Midlife Intervention for Dementia Deterrence (In-MINDD) randomised controlled feasibility trial
Creators: name: OâDonnell, Catherine
name: Browne, Susan
name: Pierce, Maria
name: McConnachie, Alex
name: Deckers, Kay
name: Boxtel, Martin Van
name: Manera, Valeria
name: KĂśhler, Sebastian
name: Redmond, Muriel
name: Verhey, Frans
name: Akker, Marjan Van Den
name: Power, Kevin
name: Irving, Kate
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Neuroscience
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: 111714 Mental Health
subject: FOS: Health sciences

description: In-MINDD protocol, following SPIRIT guidelines. (DOCX 144Â kb)
Emergence of simple and complex contagion dynamics from weighted belief networks
Creators: name: Aiyappa, Rachith
name: Flammini, Alessandro
name: Ahn, Yong-Yeol
Publisher: name: arXiv
Year: 2023
Subjects: subject: Social and Information Networks (cs.SI)
subject: Physics and Society (physics.soc-ph)
subject: FOS: Computer and information sciences
subject: FOS: Physical sciences

description: Social contagion is a ubiquitous and fundamental process that drives individual and social changes. Although social contagion arises as a result of cognitive processes and biases, the integration of cognitive mechanisms with the theory of social contagion remains an open challenge. In particular, studies on social phenomena usually assume contagion dynamics to be either simple or complex, rather than allowing it to emerge from cognitive mechanisms, despite empirical evidence indicating that a social system can exhibit a spectrum of contagion dynamics -- from simple to complex -- simultaneously. Here, we propose a model of interacting beliefs, from which both simple and complex contagion dynamics can organically arise. Our model also elucidates how a fundamental mechanism of complex contagion -- resistance -- can come about from cognitive mechanisms.
Kolbia quisquiliarum Bertkau 1882
Creators: name: Georgiev, Dilian
Publisher: name: Zenodo
Year: 2018
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Psocodea
Amphipsocidae
Kolbia
Kolbia quisquiliarum

description: Kolbia quisquiliarum Bertkau, 1882
Material examined: 1 ♂, 23.5.2018, Sarnena Gora Mts., N of Dabrava village, broad leaf xeric forest, dominated by Quercus spp. and Carpinus spp. with a lot of meadows, collected by sweep netting from grass vegetation dominated by Poaceae, N42 27 30.3 E25 35 37.0, 516 m a.s.l.
description: Published as part of Georgiev, Dilian, 2018, Four species of Psocoptera as new records for Bulgaria, pp. 1-2 in ZooNotes 2018 (130) on page 2, DOI: 10.5281/zenodo.12658669
Additional file 4: of A MAGIC population-based genome-wide association study reveals functional association of GhRBB1_A07 gene with superior fiber quality in cotton
Creators: name: Md Islam
name: Thyssen, Gregory
name: Jenkins, Johnie
name: Linghe Zeng
name: Delhom, Christopher
name: McCarty, Jack
name: Deng, Dewayne
name: Hinchliffe, Doug
name: Jones, Don
name: Fang, David
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified

description: Title: Kinship matrix among the 547 RILs of Upland cotton MAGIC population using GBS based SNP and SSR marker. Description of data: This figure contains the information of Kinship relationship among the tested RILs of MAGIC population. (DOCX 400Â kb)
Biomonitoring of arsenic, cadmium and lead in two artisanal and small-scale gold mining areas in Zimbabwe
Creators: name: Rakete, Stefan
name: Moonga, Given
name: Wahl, Anna-Maria
name: Mambrey, Viola
name: Shoko, Dennis
name: Moyo, Dingani
name: Muteti-Fana, Shamiso
name: Tobollik, Myriam
name: Steckling-Muschack, Nadine
name: Bose-O’Reilly, Stephan
Publisher: name: Universität Regensburg
Year: 2021
Subjects: subject: MERCURY; MANGANESE; EXPOSURE; Biomonitoring; Toxic metals; Arsenic; Cadmium; Lead; Artisanal and small-scale gold mining; Zimbabwe
subject: 610 Medizin

description: People living and working in artisanal and small-scale gold mining (ASGM) areas are frequently exposed to elemental mercury (Hg), which is used for gold extraction. However, additional exposure to other toxic metals such as arsenic (As), cadmium (Cd) and lead (Pb) may result from mining-related activities and could be ingested via dust, water or food. In these areas, only limited biomonitoring data is available for toxic metals other than Hg. In particular, data about the exposure to As, Cd and Pb is unavailable for the Zimbabwean population. Therefore, we conducted a cross-sectional study in two ASGM areas in Zimbabwe to evaluate the internal exposure to these metals. In total, urine and blood samples from 207 people that identified themselves as miners were collected and analysed for As and Cd in urine as well as Pb in blood by GF-AAS. Median levels (interquartile ranges in mu g/l) of As and Pb were 9.7 mu g/l (4.0, 18.5) and 19.7 mu g/l (12.5, 34.5), respectively. The 25th percentile and the median for Cd were below the limit of detection (0.5 mu g/l); the 75th percentile was at 0.9 mu g/l. The results were compared to reference values found for the general population in the USA and Germany, and a significant number of participants exceeded these values (As, 33 %; Cd, 27 %; Pb, 32 %), indicating a relevant exposure to toxic metals. Although not representative for the Zimbabwean population, our results demonstrate that the exposure to toxic metals is relevant for the public health in Zimbabwe and requires further investigation.
The GreatSchools Rating Change
Creators: name: Nguyen, Huong
Publisher: name: Georgia State University
Year: 2024

description:
GreatSchools (GS) rating is the most visible school quality measure available to homebuyers. In 2017, GS changed its rating system, by incorporating other rating components in its measure and shifting away from focusing exclusively on test scores (TS). Using this abrupt rating change event, I examine the market response to the GS rating change via home prices by comparing homes in school districts that received GS rating changes to similar ones in districts with no rating changes before and after the event. Home price coefficients after the GS rating change are lower than those before the change, reflecting a sensitivity reduction in market response to the new GS rating due to the redistribution of schools across GS rating categories that led to a disconnection between the new rating and socio-demographics. Prices in districts that received GS rating increases were not significantly impacted, while prices in districts where GS ratings were downgraded significantly increase by 3.6%. Homebuyer locality drives such market response. In districts with the highest proportions of non-local in-migration, the direction of the GS rating change, net of TS change, is dominant, consistent with the reliance on availability heuristics that the GS ratings system provides. Whereas in districts comprised heavily of local homebuyers, the direction of TS change is dominant as local homebuyers appear to disregard the GS reference point.
Cyananthus umbrosa Griff.
Creators: name: Akhil, Mannar Kandy
name: Möller, Michael
name: Nampy, Santhosh
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Lamiales
Gesneriaceae
Cyananthus
Cyananthus umbrosa

description: Cyananthus umbrosa Griff.
Notulae ad Plantas Asiaticas 4: 154 (Griffith 1854). — Stauranthera umbrosa (Griff.) C.B.Clarke, Commelynaceae et Cyrtandraceae Bengalenses 126 (Clarke 1874).
— Type: India. Assam, Gubroo hills, 08.III.1836, Griffith W. 3845 (lecto-, K [K000858010]! digital image, here designated [Fig. 1]; isolecto-, K [K000858011]! digital image).
LECTOTYPIFICATION
In the protologue Griffith (1854) cited “HAB. Assam. In umbrosis humidis collis humilis prope Gubroo Purbut: March, 1836.”, but did not provide specimen details. We have traced a single sheet at K with three flowering twigs and two barcode numbers (K000858010, K000858011). In the upper part of the sheet, there are two flowering twigs and the barcode number is labelled in between them. Thus, we are considering them as a single collection under the barcode number K000858010. K000858011 has a single flowering specimen but the collection details are not clearly readable. On the other hand, the collection K000858010 has a field label annotated ‘ Gubroo Hills, 3.8/36’. The location exactly matches with the protologue while the date of collection is presumably March 8 1836. Further, the sub-opposite or alternate, oblong-ovate leaves, acuminate at apex, petaloid calyx and five-winged flower buds in K000858010 agrees with the protologue, hence, it is selected here as the lectotype.
description: Published as part of Akhil, Mannar Kandy, Möller, Michael & Nampy, Santhosh, 2022, Lectotypifications of four names in the family Gesneriaceae, pp. 15-21 in Adansonia (3) (3) 44 (3) on page 16, DOI: 10.5252/adansonia2022v44a3, http://zenodo.org/record/6000885
Additional file 1: of Outcomes following the implementation of a quality control campaign to decrease sternal wound infections after coronary artery by-pass grafting
Creators: name: Lindblom, Rickard
name: Lytsy, Birgitta
name: SandstrĂśm, Camilla
name: Nadjira Ligata
name: Larsson, Beata
name: RansjĂś, Ulrika
name: Swenne, Christine
Publisher: name: Figshare
Year: 2015
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Developmental Biology
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Questionnaire in Swedish, original. (PDF 136Â kb)
Additional file 2: of Impact of HIV infection on the presentation, outcome and host response in patients admitted to the intensive care unit with sepsis; a case control study
Creators: name: Wiewel, Maryse
name: MichaĂŤla Huson
name: Vught, Lonneke Van
name: Hoogendijk, Arie
name: Klouwenberg, Peter Klein
name: Horn, Janneke
name: RenĂŠ Lutter
name: Cremer, Olaf
name: Schultz, Marcus
name: Bonten, Marc
name: Poll, Tom Van Der
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases
subject: 60506 Virology
subject: FOS: Biological sciences
subject: Computational Biology

description: Plasma biomarkers in the matched pneumosepsis cohort during the first admission (readmissions excluded). (DOCX 17 kb)
Didymocarpus griffithii Wight
Creators: name: Akhil, Mannar Kandy
name: Möller, Michael
name: Nampy, Santhosh
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Lamiales
Gesneriaceae
Didymocarpus
Didymocarpus griffithii

description: Didymocarpus griffithii Wight
Illustrations of Indian Botany 2: 182, pl. 159 (Wight 1850). — Dichrotrichum griffithii (Wight) C.B.Clarke, Commelynaceae et Cyrtandraceae Bengalenses: 78-79 (Clarke 1874). — Loxostigma griffithii (Wight) C.B.Clarke, in A.DC. & C.DC., Monographiae Phanerogamarum 5: 60 (Candolle & Candolle 1883).
— Type: India. Meghalaya, Khasya [Khassya, now Khasi], s.d., Griffith W. s.n. (lecto-, K [K000831968]! first step designated by Vitek et al. 2000; second step here designated [Fig.2]; isolecto-, BM [BM000997689], K [K000831969, K000831970]! digital images).
LECTOTYPIFICATION
While describing Didymocarpus griffithii, Wight (1850) cited the collection details only as “Khassya [Khasya], Griffith”. Burtt (1975) and Vitek et al. (2000) did not provide further details, except for the latter mentioning K for the location of the types. Hence this can be considered as the first step of lectotypification. There are three relevant herbarium sheets at K (K000831968, K000831969, K000831970). All of them bear perfect specimens with axillary cymes and a pair of lanceolate bracts at each branching and with the annotations “Khasya [Khassya], Griffith ” in pencil or ink. K000831968 and K000831969 bear original Wight herbarium labels (HERB. R. WIGHT. PROP.). Among them, sheet K000831968 with a Wight label and annotation by Weitzman and Skog as type material is selected here as the lectotype (second-step).
description: Published as part of Akhil, Mannar Kandy, Möller, Michael & Nampy, Santhosh, 2022, Lectotypifications of four names in the family Gesneriaceae, pp. 15-21 in Adansonia (3) (3) 44 (3) on page 16, DOI: 10.5252/adansonia2022v44a3, http://zenodo.org/record/6000885
Lysionotus pubescens C. B. Clarke
Creators: name: Akhil, Mannar Kandy
name: Möller, Michael
name: Nampy, Santhosh
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Lamiales
Gesneriaceae
Lysionotus
Lysionotus pubescens

description: Lysionotus pubescens C.B.Clarke
Journal of the Linnean Society, Botany 25: 52 (Clarke 1889).
— Type: India. Muneypoor, Moa, 5500 ft, 27.X.1885, C.B. Clarke 41283A (lecto-, K [K000831989]! digital image, here designated [Fig. 3]; isolecto-, K [K000831990, K000831991]! digital images).
LECTOTYPIFICATION
In the protologue of Lysionotus pubescens, Clarke (1889) cited “North Muneypore [Manipur], alt. 5500 feet [n. 41283]” along with an illustration (Clarke 1889: pl. 23) which is also original material according to Art 9.4. (Turland et al. 2018), and since Clarke omitted to explicitly state a holotype, a lectotypification is necessary (Art. 9.3., Turland et al. 2018). We have traced three relevant herbarium sheets at K with the collection numbers 41283A (K000831989), 41283D (K000831990) and 41283E (K000831991). All specimens have mature capsules and detailed field labels. Among them, K000831989 bears four fruiting branches and an annotation by Clarke:“shrub 6-8 feet long, semi pendent, much branched, Lysionotus pubescens sp. nov. ”, is selected here as the lectotype.
description: Published as part of Akhil, Mannar Kandy, Möller, Michael & Nampy, Santhosh, 2022, Lectotypifications of four names in the family Gesneriaceae, pp. 15-21 in Adansonia (3) (3) 44 (3) on page 16, DOI: 10.5252/adansonia2022v44a3, http://zenodo.org/record/6000885
Comprehensive study on the dynamic action mechanism of methanol inhibiting hydrate formation and decomposition in simulated seawater
Creators: name: Ma, Pan
name: Fu, Shanshan
name: Cheng, Yong
name: Jiang, Houshun
name: Xu, Hualei
name: Wang, Jie
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Physical Sciences not elsewhere classified
subject: Cell Biology
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Natural gas hydrate is one of the main clean energy sources. It has abundant reserves and high exploitation value in the world. At present, the injection inhibitor decomposition method is the most effective extraction method. In order to further clarify the mechanism of thermodynamic inhibitors for methanol, this paper combines experimental and molecular simulation methods to study the dynamic influence mechanism of methanol on hydrate formation and decomposition in simulated seawater. The specific mechanism of how salt ions and alcohol molecules affect hydrate growth is analyzed, and an explanation is given accordingly. The results show that: ① Methanol at a concentration of 1 wt% has a promoting effect of 9.91% on the formation of methane hydrates. At lower concentrations of 3 wt% and 5 wt%, methanol shows a weak inhibitory effect on hydrates. At a concentration of 10 wt%, the formation of hydrates is completely inhibited. ② From the perspective of kinetics analysis, methanol has no effect on the decomposition of hydrate, but can effectively inhibit the secondary formation of hydrate. ③ The salt ions in simulated seawater have hydration and salt-expulsion effects, which continuously reduce the solubility of methane, leading to an extended growth period of hydrate and inhibiting the formation of hydrate. ④ The molecular simulation results show that when the simulation step size lasts for 30 ns, methane gas exhibits different existential states in simulated seawater and fresh water. The former shows obvious gas-liquid stratification, and the latter appears in the form of nanobubbles, and an increase in methanol concentration will prolong the formation time of methane nanobubbles. ⑤ According to the simulation results from the perspective of molecular dynamics, when methanol molecules enter the crystal cavity of the hydrate, the hydroxyl groups will disturb the formation of the hydrogen bond network of the hydrate, resulting in the inability of the hydrate cage structure to close, which inhibits the formation of the hydrate. The above research results are helpful for field personnel to deepen the understanding of the mechanism of methanol inhibitors.
Additional file 1:Tables S1 and S2. of Sex-specific regulation of chemokine Cxcl5/6 controls neutrophil recruitment and tissue injury in acute inflammatory states
Creators: name: Shimona Madalli
name: Beyrau, Martina
name: Whiteford, James
name: Duchene, Johan
name: Inderpal Singh Nandhra
name: Nimesh Patel
name: Madhur Motwani
name: Gilroy, Derek
name: Thiemermann, Christoph
name: Nourshargh, Sussan
name: Scotland, Ramona
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Cell Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology

description: Table S1. Details of antibodies used for flow cytometry. Table S2. Sequence of primers used for real-time quantitative PCR with SYBR green. (PDF 96Â kb)
Additional file 1: of Patients’ and healthcare providers’ perceptions of a mobile portal application for hospitalized patients
Creators: name: O’Leary, Kevin
name: Sharma, Rashmi
name: Killarney, Audrey
name: O’Hara, Lyndsey
name: Lohman, Mary
name: Eckford Culver
name: Liebovitz, David
name: Cameron, Kenzie
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Science Policy
subject: 60506 Virology

description: Screenshots of Patient Portal: this appendix provides an example of portal content and features. (PDF 2005 kb)
Additional file 8: of A MAGIC population-based genome-wide association study reveals functional association of GhRBB1_A07 gene with superior fiber quality in cotton
Creators: name: Md Islam
name: Thyssen, Gregory
name: Jenkins, Johnie
name: Linghe Zeng
name: Delhom, Christopher
name: McCarty, Jack
name: Deng, Dewayne
name: Hinchliffe, Doug
name: Jones, Don
name: Fang, David
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Title: Linkage disequilibrium (LD) contour plot by chromosome generated from JMP genomics 6.0. Description of data: The LD contour plots for all the 26 Upland cotton chromosomes are included in this figure. The LD contour plot were generated from the square of correlation coefficients (r2) between markers located on each chromosome at different physical distances (bp) using JMP genomics 6.0 software. The X and Y axis have the physical distance of two markers. The square of correlation coefficients (r2) presents as color code (blue to red â   1.000 to 0.000). (DOCX 1734Â kb)
The Generalizability of Explanations
Creators: name: Tan, Hanxiao
Publisher: name: arXiv
Year: 2023
Subjects: subject: Artificial Intelligence (cs.AI)
subject: FOS: Computer and information sciences

description: Due to the absence of ground truth, objective evaluation of explainability methods is an essential research direction. So far, the vast majority of evaluations can be summarized into three categories, namely human evaluation, sensitivity testing, and salinity check. This work proposes a novel evaluation methodology from the perspective of generalizability. We employ an Autoencoder to learn the distributions of the generated explanations and observe their learnability as well as the plausibility of the learned distributional features. We first briefly demonstrate the evaluation idea of the proposed approach at LIME, and then quantitatively evaluate multiple popular explainability methods. We also find that smoothing the explanations with SmoothGrad can significantly enhance the generalizability of explanations.
Petrocosmea parryorum C. E. C. Fisch.
Creators: name: Akhil, Mannar Kandy
name: Möller, Michael
name: Nampy, Santhosh
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Lamiales
Gesneriaceae
Petrocosmea
Petrocosmea parryorum

description: Petrocosmea parryorum C.E.C.Fisch.
Bulletin of Miscellaneous Information (Kew) 1926 (10): 438 (Fischer 1926).
— Type: India. Assam, Lushai Hills, Muallung (Chin border), c. 5000 ft. 03.XI.1925, Mr. & Mrs. N.E. Parry s.n. (lecto-, K [K000196635]! digital image, here designated [Fig. 4]; isolecto-, K [K000196636, K000196637, K000196638]! digital images).
LECTOTYPIFICATION
Fischer (1926) described Petrocosmea parryorum, based on the collections of Mr. and Mrs. Parry and cited “ INDIA. Assam; Lushai Hills, about 1700 m., near Sailsuk, Muallung, on the Chin Hill border, and Vanlaiphai, Sept.-Nov., Mr. and Mrs. N. E. Parry (type in Herb. Kew.)”. We have traced four relevant sheets at K (K000196635, K000196636, K000196637, K000196638), that seem to come from three collections: K000196635 and K000196636 were from Muallung while K000196637 from Vanlaiphai, all three collected on 3 November 1925, and K000196638 from Sailsuk collected in September 1925. The sheet K000196636 has two plants, a single leaf and inflorescence and a separately mounted flower. The plant on the right has a flower with a 6-lobed corolla, which is an exception. K000196637 and K000196638 each hold a small single plant and a separately mounted leaf. The former has no flowers but infructescences separately placed in an envelope on the sheet, while the latter plant has flowers and illustrations. K000196635 having five flowering plants on the sheet with five leaves are mounted separately and a flower in a pocket is selected here as the lectotype.
description: Published as part of Akhil, Mannar Kandy, Möller, Michael & Nampy, Santhosh, 2022, Lectotypifications of four names in the family Gesneriaceae, pp. 15-21 in Adansonia (3) (3) 44 (3) on page 21, DOI: 10.5252/adansonia2022v44a3, http://zenodo.org/record/6000885
Additional file 2: of The economic burden of urinary tract infections in women visiting general practices in France: a cross-sectional survey
Creators: name: M. FranĂ§Ois
name: T. Hanslik
name: B. Dervaux
name: Y. Le Strat
name: C. Souty
name: S. Vaux
name: S. Maugat
name: C. Rondet
name: M. Sarazin
name: B. Heym
name: B. Coignard
name: L. Rossignol
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biotechnology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Marine Biology
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Inclusion questionnaire. (DOC 195Â kb)
Additional file 11: Table S8. of Genome-wide identification and characterization of auxin response factor (ARF) family genes related to flower and fruit development in papaya (Carica papaya L.)
Creators: name: Kaidong Liu
name: Changchun Yuan
name: Haili Li
name: Wanhuang Lin
name: Yanjun Yang
name: Chenjia Shen
name: Xiaolin Zheng
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: The promoter sequences of reproduction-related genes. (DOCX 28Â kb)
Additional file 1: of Identification of a Latin American-specific BabA adhesin variant through whole genome sequencing of Helicobacter pylori patient isolates from Nicaragua
Creators: name: Thorell, Kaisa
name: Hosseini, Shaghayegh
name: GonzĂĄles, Reyna Palacios
name: Chatchai Chaotham
name: Graham, David
name: Paszat, Lawrence
name: Rabeneck, Linda
name: Lundin, Samuel
name: Intawat Nookaew
name: Ă Sa SjĂśling
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Supplementary tables. Table S1. Assembly statistics. Table S2. Complete genomes used for compar ative genomics. Table S3. Whole-genome sequenced strains used for comparative genomics. (PDF 210 kb)
Additional file 10: Table S7. of Genome-wide identification and characterization of auxin response factor (ARF) family genes related to flower and fruit development in papaya (Carica papaya L.)
Creators: name: Kaidong Liu
name: Changchun Yuan
name: Haili Li
name: Wanhuang Lin
name: Yanjun Yang
name: Chenjia Shen
name: Xiaolin Zheng
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Promoter analysis (locations from ATG) of the genes involved in flower development and fruit ripening. (DOCX 16Â kb)
Additional file 1: of The economic burden of urinary tract infections in women visiting general practices in France: a cross-sectional survey
Creators: name: M. FranĂ§Ois
name: T. Hanslik
name: B. Dervaux
name: Y. Le Strat
name: C. Souty
name: S. Vaux
name: S. Maugat
name: C. Rondet
name: M. Sarazin
name: B. Heym
name: B. Coignard
name: L. Rossignol
Publisher: name: Figshare
Year: 2016
Subjects: subject: Cell Biology
subject: Biotechnology
subject: Developmental Biology
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: First page of register for each doctor. (DOC 97Â kb)
Amathillopsis Heller 1875
Creators: name: Lörz, Anne-Nina
name: Peart, Rachael A.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Amphipoda
Amathillopsidae
Amathillopsis

description: Amathillopsis Heller, 1875
Amathillopsis Heller, 1875: 35.—Stebbing, 1906: 384.— Gurjanova, 1955: 209 (key).—J. L. Barnard, 1969: 394.—J. L. Barnard & Karaman, 1991: 390.
Acanthopleustes Holmes, 1908: 533 (type species Acanthopleustes annectens Holmes, 1908, by original designation).
Type species. Amathillopsis spinigera Heller, 1875 (by original designation).
Species composition. Amathillopsis affinis Miers, 1881, A. annectens (Holmes, 1908), A. atlantica Chevreux, 1908, A. australis Stebbing, 1883, A. charlottae Coleman, 1998, A. comorensis Ledoyer, 1986, A. grevei J. L. Barnard, 1961, A. inkenae LÖrz & Horton, 2021, A. pacifica Gurjanova, 1955, A. pacifica margo J. L. Barnard, 1967, A. roroi Coleman & Coleman, 2008, A. septemdentata Ledoyer, 1978, A. spinigera Heller, 1875, A. takahashiae Tomikawa & Mawatari, 2006.
description: Published as part of Lörz, Anne-Nina & Peart, Rachael A., 2023, Amathillopsidae (Crustacea: Amphipoda) from New Zealand, Including the Description of a New Species, pp. 459-470 in Records of the Australian Museum (Rec. Aust. Mus.) (Rec. Aust. Mus.) 75 (4) on page 461, DOI: 10.3853/j.2201-4349.75.2023.1885, http://zenodo.org/record/10413768
Time- versus event-triggered consensus of a single-integrator multi-agent system
Creators: name: Meister, David
name: Aurzada, Frank
name: Lifshits, Mikhail A.
name: Allgöwer, Frank
Publisher: name: arXiv
Year: 2023
Subjects: subject: Systems and Control (eess.SY)
subject: FOS: Electrical engineering, electronic engineering, information engineering

description: Event-triggered control has shown the potential for providing improved control performance at the same average sampling rate when compared to time-triggered control. While this observation motivates numerous event-triggered control schemes, proving it from a theoretical perspective has only been achieved for a limited number of settings. Inspired by existing performance analyses for the single-loop case, we provide a first fundamental performance comparison of time- and event-triggered control in a multi-agent consensus setting. For this purpose, we consider undirected connected network topologies without communication delays, a level-triggering rule for event-triggered control, and the long-term average of the quadratic deviation from consensus as a performance measure. The main finding of our analysis is that time-triggered control provably outperforms event-triggered control beyond a certain number of agents in our particular setting. We thereby provide an illustrative distributed problem setup in which event-triggered control results in a performance disadvantage when compared to time-triggered control in the case of large networks. Moreover, we derive the asymptotic order of the performance measure under both triggering schemes which gives more insights into the cost relationship for large numbers of agents. Thus, by presenting an analysis for a particular setup, this work points out that transferring an event-triggering scheme from the single-loop to the multi-agent setting can lead to a loss of the often presumed superiority of event-triggered control over time-triggered control. In particular, the design of performant decentralized event-triggering schemes can therefore pose additional challenges when compared to the analogue single-loop case.
description: 19 pages, 3 figures. This article builds upon our preceding work: https://doi.org/10.1109/CDC51059.2022.9993301
Amathillopsis grevei J. L. Barnard 1961
Creators: name: Lörz, Anne-Nina
name: Peart, Rachael A.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Amphipoda
Amathillopsidae
Amathillopsis
Amathillopsis grevei

description: Amathillopsis grevei Barnard, 1961
Holotype: Male, 13 mm, Tasman Sea, 44°18'S 166°46'E, 3580 m, clay, 17 January 1952.
Diagnosis (after Barnard, 1961). Eyes absent; dorsal projections reaching maximum length on pereonite 7; pleonites 1–2, sometimes 3, smooth; dorsal projections commencing as small elements on pereonite 3 and increasing progressively in size through pereonite 7; anterior corners of first 4 coxae angular but not very sharp and not attenuated; coxae relatively short, quadrate; posterior lobes on propodus of gnathopods blunt, not attenuated; posterior margin of gnathopod 2 ischium slightly but not grossly lobate and bearing small marginal robust setae, this condition slightly developed on gnathopod 1; posteroventral corners of epimeron 2 and 3 greatly reduced evident; posterior end of pleonite 6 with small medial tooth; telson broad, short, apically emarginate.Accessory flagellum composed of single slender article tipped with 2 or 3 setae.
Remarks. As discussed by LÖrz & Horton (2021), care should be taken in use of the relative sizes of the dorsal processes in distinguishing species because these are likely to vary ontogenetically, as in the two type specimens of Amathillopsis inkenae LÖrz & Horton, 2021, where the larger male paratype has more pronounced, acute processes than the smaller male holotype. This is also likely to occur in other species in the genus. We consider the possibility that Amathillopsis grevei, which is only known from a single specimen of 13 mm, was described from an immature specimen.
description: Published as part of Lörz, Anne-Nina & Peart, Rachael A., 2023, Amathillopsidae (Crustacea: Amphipoda) from New Zealand, Including the Description of a New Species, pp. 459-470 in Records of the Australian Museum (Rec. Aust. Mus.) (Rec. Aust. Mus.) 75 (4) on page 465, DOI: 10.3853/j.2201-4349.75.2023.1885, http://zenodo.org/record/10413768