cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Complete mitochondrial DNA sequence of Tupaia belangeri yaoshanensis (Wang, 1987) from Dayao Mountains in China
Creators: name: Cao, Yingying
name: Zhai, Shanshan
name: Li, Zhuxin
name: Huang, Zhengtuan
name: Liang, Liang
name: Tao, Junyu
name: Xiao, Jian
name: Leng, Jing
name: Tang, Haibo
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Virology

description: The tree shrew (Tupaia belangeri) is currently placed in the order Scandentia. Owing to their unique characteristics, such as small body size, high brain-to-body mass ratio, short reproductive cycle and life span, and low maintenance costs in laboratory conditions, tree shrews have been proposed as alternative experimental animals to primates in biomedical research. In this study, we determined the complete mitochondrial genome of the subspecies Tupaia belangeri yaoshanensis (T.b. yaoshanensis). The mitochondrial DNA (mtDNA) is 16,777 bp long and contains 13 protein-coding genes (PCGs), two ribosomal RNA genes (12S and 16S), and 22 transfer RNA (tRNA) genes. The base composition of the mitogenome was A (32.28%), T (26.82%), G (14.79%), and C (26.11%). For the 13 PCGs, 1405 variable sites were found between T.b. yaoshanensis and T.b. chinensis (JN800724), of which 916 were synonymous and 489 were nonsynonymous. The frequency of mutations significantly varied among the different genes, with the highest value in the mt-NAD5 gene of tree shrews. Phylogenetic analysis based on the amino acid sequences of 13 PCGs revealed a closer relationship between the species of Scandentia and Lagomorpha. To the best of our knowledge, this is the first study to report the complete mitochondrial genome sequence of T.b. yaoshanensis.
Stated response and multiple discrete-continuous choice models: Analyses of residuals
Creators: name: Jäggi, Boris
name: Axhausen, Kay W.
name: Weis, Claude
Publisher: name: ETH Zurich
Year: 2011
Subjects: subject: VERKEHRSMODELLE + VERKEHRSSIMULATION (VERKEHR UND TRANSPORT)
subject: THEORIE DER AUSWAHL (OPERATIONS RESEARCH)
subject: TRANSPORT MODELS + TRAFFIC SIMULATION (TRANSPORTATION AND TRAFFIC)
subject: THEORY OF CHOICE (OPERATIONS RESEARCH)
subject: info:eu-repo/classification/ddc/380
subject: info:eu-repo/classification/ddc/510
subject: Commerce, communications, transport
subject: Mathematics
subject: FOS: Mathematics

description: Arbeitsberichte Verkehrs- und Raumplanung, 661
An inequality for length and volume in the complex projective plane
Creators: name: Katz, Mikhail G.
Publisher: name: arXiv
Year: 2020
Subjects: subject: Differential Geometry (math.DG)
subject: Analysis of PDEs (math.AP)
subject: Geometric Topology (math.GT)
subject: FOS: Mathematics
subject: 53C23, 53C22

description: We prove a new inequality relating volume to length of closed geodesics on area minimizers for generic metrics on the complex projective plane. We exploit recent regularity results for area minimizers by Moore and White, and the Kronheimer--Mrowka proof of the Thom conjecture.
description: 10 pages; to appear in Geometriae Dedicata
Alternative Methods of Programming
Creators: name: Mighell, Ronald L.
name: Mighell, Ronald L.
Publisher: name: Unknown
Year: 1955
Subjects: Agricultural and Food Policy
Research Methods/ Statistical Methods

description: Linear programming is rapidly finding a place in every working economist's tool chest. Experience with this research technique has reached the point at which the relative efficiency of alternative methods of programming needs careful study. In the accompanying paper such an evaluation is made for one type of problem.
Topological spin transport of photons: "magnetic monopole" gauge field in Maxwell equations and polarization splitting of rays in periodically inhomogeneous media
Creators: name: Bliokh, K. Yu.
name: Freilikher, V. D.
Publisher: name: arXiv
Year: 2004
Subjects: subject: Other Condensed Matter (cond-mat.other)
subject: Optics (physics.optics)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Topological spin transport of electromagnetic waves (photons) in stationary smoothly inhomogeneous isotropic medium is studied. By diagonalizing photon kinetic energy in Maxwell equations we derive the non-Abelian pure gauge potential in the momentum space, which in adiabatic approximation for transverse waves takes the form of two Abelian U(1) potentials corresponding to magnetic monopole-type fields. These fields act on circularly polarized waves resulting in the topological spin transport of photons. We deduce general semiclassical (geometrical optics) ray equations that take into account a Lorentz-type force of the magnetic-monopole-like gauge field. Detailed analysis of rays in 3D medium with 2D periodic inhomogeneity is presented. It is shown that rays located initially in the inhomogeneity plane experience topological deflections or splitting that move them out from this plane. The dependence of the rays' deflection on the parameters of the medium and on the direction of propagation is studied.
description: 16 pages, 3 figures
Experience of flow in games and using it to improve well-being: A critical review
Creators: name: Mahimna Vyas
Publisher: name: figshare
Year: 2021
Subjects: subject: 170106 Health, Clinical and Counselling Psychology
subject: FOS: Psychology

description: “The destiny of games is to become boring…Fun is a process and routine is its destination (Koster, 2013).” This paper reviews the role of experiencing flow in videogames and identifies the precursors, properties, and probable outcomes. The potential importance of games has not been adequately studied in terms of the benefits for young individuals who are at risk (Kutner & Olson, 2008). The aim of this review is to increase the awareness about association between games and flow and to provide a model of flow in gaming that can be applied to improve wellbeing. This paper distinguishes the strengths of current games that generate positive affect, better functioning and scopes of socializing that promotes and supports player’s mental health and collective well-being of the gaming community.
Validity of Objective Estimates of Corn Yield
Creators: name: Hendricks, Walter A.
name: Hendricks, Walter A.
Publisher: name: Unknown
Year: 1955
Subjects: Crop Production/Industries
Productivity Analysis

description: As part of an extensive research program, the Agricultural Estimates Division of Agricultural Marketing Service is investigating objective methods for estimating and forecasting corn yields. This paper is concerned only with one question: To what extent can dif ferences in estimates of yield per acre, derived from weighing small samples of the crop just before harvest, be reconciled with yields reported by farmers and the official yield estimates derived from such reports? The present status of information on that question is given here without distracting attention from the main issue by including a mass of technical statistical detail. it should be emphasized, however, that the materials contained in this article represent only the preliminary findings of this particular research project, and that final conclusions with respect to the validity of official corn-yield estimates, compared with those obtained by other methods, cannot be made until the research program in this area has been completed and evaluated.
Complete chloroplast genome of Isoetes orientalis (Isoetaceae), an endangered quillwort from China
Creators: name: Li, Yanqing
name: Chen, Xi
name: Lin, Xiaoyan
name: Gu, Yufeng
name: Liu, Baodong
name: Zhang, Rongjing
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Environmental Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Plant Biology

description: Isoetes orientalis is an endangered hexaploidy species of Isoetaceae in China and the complete chloroplast genome of this species has not been reported. In the present study, a complete chloroplast genome of Isoetes orientalis (Isoetaceae) was assembled and annotated. This chloroplast genome has a circular structure of 145,504 bp in length, comprising a pair of inverted repeat (IR) regions of 13,207 bp each, a large single-copy (LSC) region of 91,864 bp, and a small single-copy (SSC) region of 27,226 bp. The chloroplast genome contains 136 genes, including 84 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analysis showed that I. orientalis was closely related to I. sinensis. These results provide additional resources for future studies on Isoetes from China and across the globe.
Trioza cerastii
Creators: name: Ouvrard, David
name: Burckhardt, Daniel
name: Cocquempot, Christian
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Triozidae
Trioza
Trioza cerastii

description: Trioza cerastii (Linnaeus, 1758)
(Fig. 1H)
 Chermes cerastii Linnaeus, 1758: 454.
 MATERIAL EXAMINED. — France. Alpes-Maritimes, Valdeblore, M09- BOR2000-T7-M1, 1♂ (MNHN); Alpes-Maritimes, Saint-Dalmasle-Selvage, M09-SES2000-T7-M2, 1♀ (MNHN); Alpes-Maritimes, Saorge, M 10-CAI2000-T5-M1, 1♀ (MNHN); same locality, M10- CAI2000-T6-M2, 1♂, 1♀ (BMNH); Alpes-Maritimes, Lantosque, Piste du col du Fort, 1770 m, 44°0’43.9668”N- 7°14’45.3546”E, 13.VII.2009, on Larix decidua Mill., C. Cocquempot (CBGP), 17 adults; Alpes-Maritimes, Lantosque, Granges de la Brasque, 1690 m, 44°0’28.6704”N- 7°14’56.9106”E, 13.VII.2009, C. Cocquempot (CBGP), 17 adults; Alpes-Maritimes, Bolène-Vesubie, massif de la cime du Diable, 1800-2600 m, 28.VIII.1995, 1♂, 3♀, I. Malenovský (MMBC); Alpes-Maritimes, La Brigue, French-Italian border between Mt Grai (2013 m) and Cime de Marte (2135 m), 21.VIII.1996, 1♀, I. Malenovský (MMBC).
DISTRIBUTION. — Fauna Europaea: Austria, Czech Republic, Denmark, Finland, France, Germany, Italy, Norway, Poland, Romania, Russia, Slovakia, Spain (Balearic Is.), Sweden, Switzerland, Ukraine; INPN: no data; additional data from Psyl’list: Bulgaria, China, Estonia, Hungary, Slovenia, Spain.
COMMENTS
 Description in Ossiannilsson (1992). Biology in Ossiannilsson (1992) and Conci et al. (1996). Host-plants: several species of Cerastium (Caryophyllaceae).
description: Published as part of Ouvrard, David, Burckhardt, Daniel & Cocquempot, Christian, 2015, An annotated checklist of the jumping plant-lice (Insecta: Hemiptera: Psylloidea) from the Mercantour National Park, with seven new records for France and one new synonymy, pp. 251-271 in Zoosystema 37 (1) on page 266, DOI: 10.5252/z2015n1a13, http://zenodo.org/record/5155473
Heavy-light flavour correlations of anisotropic flows at LHC energies within event-by-event transport approach
Creators: name: Plumari, Salvatore
name: Coci, Gabriele
name: Minissale, Vincenzo
name: Das, Santosh K.
name: Sun, Yifeng
name: Greco, Vincenzo
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: The heavy quarks (HQs) are unique probe of the hot QCD matter properties and their dynamics is coupled to the locally thermalized expanding quark gluon plasma. We present here a novel study of the event by event correlations between light and heavy flavour flow harmonics at LHC energy within a transport approach. Interaction between heavy quarks and light quarks have been taken into account exploring the impact of different temperature dependence of the transport coefficients $D_s$ and $Γ$. Our study indicates that $v^{heavy}_n-v^{light}_n$ correlation and the relative fluctuations of anisotropic flows, $σ_{v_{n}}/\langle v_n \rangle$, are novel observables to understand the heavy quark-bulk interaction and are sensitive to the temperature dependence even to moderate differences of $D_s(T)$, or $Γ(T)$. Hence a comparison of such new observables for HQ to upcoming experimental data at both RHIC and LHC can put further constraints on heavy quark transport coefficients and in particular on its temperature dependence toward a solid comparison between the phenomenological determination and the lattice QCD calculations.
description: 7 pages, 6 figures
Two band superconductivity in MgB2: basic anisotropic properties and phase diagram
Creators: name: Angst, M.
name: Puzniak, R.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: Magnesium diboride MgB2 has been an extraordinarily hot research topic since the discovery of superconductivity below 40 K, due to the vast amount of unusual properties originating from the involvement in superconductivity of two sets of bands that are of a different dimensionality. We review, with a strong focus on results obtained by torque magnetometry, how this leads to a complex behavior of the anisotropic superconducting state properties. The different dimensionality of the two sets of bands is manifested in the upper critical field Hc2 anisotropy, which was found to strongly decrease with increasing temperature. While the angular dependence of Hc2 follows roughly the predictions of anisotropic Ginzburg-Landau theory AGLT, small, but systematic deviations were observed near Tc. This, and the temperature dependent anisotropy, witness a breakdown of the AGLT description of MgB2, even close to Tc. Theoretical calculations are in qualitative agreement with the observed angle dependence, but suggest a much lower penetration depth anisotropy at low temperatures. Reversible torque vs angle curves in the mixed state indicate that the penetration depth anisotropy in intermediate fields has to be higher than currently available theoretical estimates. The observed field dependent effective anisotropies can be accounted for qualitatively by the faster depression of superconductivity in the more isotropic bands by the applied field. The vortex matter phase diagram is drawn, based on measurements of the reversible and irreversible torque in the mixed state. In the irreversible torque, a peak effect (PE) was observed in fields of about 0.85 Hc2. History effects of the critical current density in the PE region suggest that the PE signifies an order-disorder transition of vortex matter.
description: 38 pages, 15 figures (4 of them in reduced quality to meet size limitation), review of superconducting state anisotropies and phase diagram, with strong focus on torque results; invited chapter in vol. 1 of 'Horizons in Superconductivity Research' (Nova Publishers, NY), in print; v2 = 1 typo corrected
Elmer Working: The Demand for Meat
Creators: name: Breimyer, Harold F.
name: Breimyer, Harold F.
Publisher: name: Unknown
Year: 1955
Subjects: Demand and Price Analysis
Livestock Production/Industries

description: The last few years have seen a resurgence of creative effort in commodity price analysis, following a decade or so when analysts exploited but did not greatly extend the brilliant achievements of the 1920's and early 1930's. Much of the current research is the product of new talent. Some, however, including the publication reviewed here, is contributed by members of the original school. This study reflects insight and maturity gained from long experience. It also presents some new viewpoints and techniques in an always challenging area.
On the existence and optimality of equilibria in lobbying economies
Creators: name: Coggins, Jay S.
name: Coggins, Jay S.
Publisher: name: Unknown
Year: 1989
Subjects: Political Economy
Research Methods/ Statistical Methods

description: Suppose that members of a society are accorded status as both economic and political agents. If the polity responds to the same actors for whom economic policy matters, a simultaneity of political and economic determination is introduced. The first goal of the research presented here concerns the microeconomic question, How does an agent choose economic and political behavior simultaneously when his or her political activity has an explicit effect on the economic environment? The second is to determine conditions under which an equilibrium will exist in a generic strategic lobbying situation. The third is to discover the effect of lobbying behavior on society's welfare position. The model of the thesis begins with an exchange economy in which agents are asked to make economic and political decisions simultaneously. A government mechanism sets relative prices by law in response to donations by political interests whose stakes in the price level are diametrically opposed, trading with a larger world economy to clear the distorted domestic markets. The first result is the demonstration that under certain conditions on the economy, the model possesses a lobbying equilibrium. The welfare properties of this equilibrium are evaluated by comparing agents' utility levels at the lobbying outcome with those which would obtain in corresponding competitive economies. Both agents may be worse off with lobbying than without it, but one agent is sometimes better off with the lobbying program. Using cooperative game theoretic techniques, the potential for agents to gain by forming a coalititon and overturning the intervention policy is studied. The potential for the government to achieve an analagous improvement by implementing a tax/transfer scheme is also evaluated. It is shown that cases in which agents could help themselves by cooperating coincide precisely with cases in which the government could help them by replacing the price policy of the model with a tax/transfer policy. In order to investigate these welfare properties, and to draw conclusions about the relationships between agents' characteristics and the pricing rule, numerical experiments are carried out in which equilibrium outcomes are calculated for example economies.
Quantum Monte Carlo study of a nonmagnetic impurity in the two-dimensional Hubbard model
Creators: name: Bulut, N.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: In order to investigate the effects of nonmagnetic impurities in strongly correlated systems, Quantum Monte Carlo (QMC) simulations have been carried out for the doped two-dimensional Hubbard model with one nonmagnetic impurity. Using a bare impurity potential which is onsite and attractive, magnetic and single-particle properties have been calculated. The QMC results show that giant oscillations develop in the Knight shift response around the impurity site due to the short-range antiferromagnetic correlations. These results are useful for interpreting the NMR data on Li and Zn substituted layered cuprates.
description: 10 pages, 7 figures
Resveratrol attenuates excessive ethanol exposure-induced β-cell senescence in rats: A critical role for the NAD+/SIRT1-p38MAPK/p16 pathway
Creators: name: Luo, Gang
name: Xiao, Ling
name: Wang, Dongxia
name: Wang, Ning
name: Luo, Can
name: Yang, Xuefeng
name: Hao, Liping
Publisher: name: figshare
Year: 2020
Subjects: classificationCode: 420299
subject: Epidemiology not elsewhere classified

description: Resveratrol attenuates excessive ethanol exposure-induced β-cell senescence in rats: A critical role for the NAD+/SIRT1-p38MAPK/p16 pathway
D-instantons and matter hypermultiplet
Creators: name: Ketov, Sergei V.
Publisher: name: arXiv
Year: 2003
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We calculate the D-instanton corrections (with all D-instanton numbers) to the quantum moduli space metric of a single matter hypermultiplet with toric isometry, in the effective N=2 supergravity arising in type-IIA superstrings compactified on a Calabi-Yau (CY) threefold of Hodge number h_{2,1}=1. The non-perturbative quaternionic hypermultiplet metric is derived by resolution of a complex orbifold singularity, thus generalizing the known (Ooguri-Vafa) solution in flat spacetime to N=2 supergravity.
description: 8 pages, LaTeX, no figures
Genetic Programming for Multi-Timescale Modeling
Creators: name: Sastry, Kumara
name: Johnson, D. D.
name: Goldberg, David E.
name: Bellon, Pascal
Publisher: name: arXiv
Year: 2004
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: A bottleneck for multi-timescale dynamics is the computation of the potential energy surface (PES). We explore the use of genetic programming (GP) to symbolically regress a mapping of the saddle-point barriers from only a few calculated points via molecular dynamics, thereby avoiding explicit calculation of all the barriers. The GP-regressed barrier function enables use of kinetic Monte Carlo (KMC) to simulate real-time kinetics (seconds to hours) using realistic interactions. To illustrate, we apply a GP regression to vacancy-assisted migration on a surface of a binary alloy and predict the diffusion barriers within 0.1--1% error using 3% (or less) of the barriers, and discuss the significant reduction in CPU time.
description: Submitted to Physical Review Letters
The complete mitochondrial genome of Tenebroides mauritanicus Linnaeus, 1758 (Coleoptera: Trogossitidae)
Creators: name: Wang, Yue
name: Zhou, Bowei
name: Lin, Yiqi
name: Weng, Mingqing
name: Zhang, Zhimin
name: Tong, Yinghua
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Virology

description: Tenebroides mauritanicus Linnaeus, 1758 (Coleoptera: Trogossitidae) is a storage pest that feeds mainly on soybean and corn. In this study, we sequenced the entire mitochondrial genome of Tenebroides mauritanicus (GenBank accession number: OM161967). The total length of the mitochondrial genome is 15,696 bp, GC content is 29.65%, and the contents of each base is 38.37% A, 18.35% C, 11.30% G and 31.98% T, respectively. The genome encodes 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs) and 2 ribosomal RNA genes (rRNAs). Phylogenetic analysis showed that Tenebroides mauritanicus is clustered with Byturus ochraceus. This study provides a piece of valuable genomic information for the population genetics, phylogeny, and molecular taxonomy of Tenebroides mauritanicus.
Lower Bounds for the Volume with Upper Bounds for the Ricci Curvature in Dimension Three
Creators: name: Gimeno, Vicent
Publisher: name: arXiv
Year: 2020
Subjects: subject: Differential Geometry (math.DG)
subject: FOS: Mathematics

description: In this note we provide several lower bounds for the volume of a geodesic ball within the injectivity radius in a $3$-dimensional Riemannian manifold assuming only upper bounds for the Ricci curvature.
description: Accepted in Bulletin of the London Mathematical Society
Trioza kiefferi Giard 1902
Creators: name: Ouvrard, David
name: Burckhardt, Daniel
name: Cocquempot, Christian
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Triozidae
Trioza
Trioza kiefferi

description: Trioza kiefferi Giard, 1902
 Trioza kiefferi Giard, 1902: 121.
 MATERIAL EXAMINED. — France. Alpes-Maritimes, Saorge, Malaise trap, M10-CAI1400-T6-M2, 1♀ (MNHN).
DISTRIBUTION. — Fauna Europaea: Italy (mainland + Sicily), Malta; INPN: no data; additional data from Psyl’list: Algeria, France, Portugal, Slovenia, ex-Yugoslavia.
COMMENTS
 Description in Rapisarda (1989). Biology in Rapisarda (1989) and Conci et al. (1996). Host-plants: several species of Rhamnus (Rhamnaceae).
description: Published as part of Ouvrard, David, Burckhardt, Daniel & Cocquempot, Christian, 2015, An annotated checklist of the jumping plant-lice (Insecta: Hemiptera: Psylloidea) from the Mercantour National Park, with seven new records for France and one new synonymy, pp. 251-271 in Zoosystema 37 (1) on page 267, DOI: 10.5252/z2015n1a13, http://zenodo.org/record/5155473
Perfect absorption by an atomically thin crystal
Creators: name: Horng, Jason
name: Martin, Eric W.
name: Chou, Yu-Hsun
name: Courtade, Emmanuel
name: Chang, Tsu-chi
name: Hsu, Chu-Yuan
name: Wentzel, Michael-Henr
name: Ruth, Hanna G.
name: Lu, Tien-chang
name: Cundiff, Steven T.
name: Wang, Feng
name: Deng, Hui
Publisher: name: arXiv
Year: 2019
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Optical absorption is one of fundamental light-matter interactions. In most materials, optical absorption is a weak perturbation to the light. In this regime, absorption and emission are irreversible, incoherent processes due to strong damping. Excitons in monolayer transition metal dichalcogenides, however, interact strongly with light, leading to optical absorption in the non-perturbative regime where coherent re-emission of the light has to be considered. Between the incoherent and coherent limits, we show that a robust critical coupling condition exists, leading to perfect optical absorption. Up to 99.6% absorption is measured in a sub-nanometer thick MoSe2 monolayer placed in front of a mirror. The perfect absorption is controlled by tuning the exciton-phonon, exciton-exciton, and exciton-photon interactions by temperature, pulsed laser excitation, and a movable mirror, respectively. Our work suggests unprecedented opportunities for engineering exciton-light interactions using two-dimensional atomically thin crystals, enabling novel photonic applications including ultrafast light modulators and sensitive optical sensing.
title: The Magnetic Field Penetration Measurement of Thin Film and Multilayered Superconductors for SRF Cavities
Creators: name: Senevirathne, Iresha Harshani
Publisher: name: Old Dominion University Libraries
Year: 2021

description: Radio Frequency (RF) Cavities are used in particle accelerators and they are typically formed from or coated with superconducting materials. High purity niobium is the material of choice for SRF cavities and niobium cavities operate at their theoretical field limits. SRF researchers have begun a significant R&D effort to develop alternative materials to continue to keep up with the demands of new accelerator facilities.
Entrainment coefficient and effective mass for conduction neutrons in neutron star crust: simple microscopic models
Creators: name: Carter, Brandon
name: Chamel, Nicolas
name: Haensel, Pawel
Publisher: name: arXiv
Year: 2004
Subjects: subject: Nuclear Theory (nucl-th)
subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: In the inner crust of a neutron star, at densities above the ``drip'' threshold, unbound ``conduction'' neutrons can move freely past through the ionic lattice formed by the nuclei. The relative current density $n^i= n \bar v^i$ of such conduction neutrons will be related to the corresponding mean particle momentum $p_i$ by a proportionality relation of the form $n^i= {\cal K}p^i$ in terms of a physically well defined mobility coefficient $\cal K$ whose value in this context has not been calculated before. Using methods from ordinary solid state and nuclear physics, a simple quantum mechanical treatment based on the independent particle approximation, is used here to formulate $\cal K$ as the phase space integral of the relevant group velocity over the neutron Fermi surface. The result can be described as an ``entrainment'' that changes the ordinary neutron mass m to a macroscopic effective mass per neutron that will be given -- subject to adoption of a convention specifying the precise number density n of the neutrons that are considered to be ``free'' -- by $m_\star=n/{\cal K}$. The numerical evaluation of the mobility coefficient is carried out for nuclear configurations of the ``lasagna'' and ``spaghetti'' type that may be relevant at the base of the crust. Extrapolation to the middle layers of the inner crust leads to the unexpected prediction that $m_\star$ will become very large compared with m.
description: 27 pages, latex. Revised published version
Weekly rhythm in joint time expenditure to all at-home and out-of-home activities: Application of Kuhn-Tucker demand system model using a multi-week travel diary data
Creators: name: Nurul Habib, Khander M.
name: Miller, Eric J.
name: Axhausen, Kay W.
Publisher: name: ETH Zurich
Year: 2007
Subjects: subject: VERKEHRSVERHALTEN DER BEVÖLKERUNG (VERKEHR UND TRANSPORT)
subject: VERKEHRSMODELLE + VERKEHRSSIMULATION (VERKEHR UND TRANSPORT)
subject: TRAVELLER BEHAVIOUR (TRANSPORTATION AND TRAFFIC)
subject: TRANSPORT MODELS + TRAFFIC SIMULATION (TRANSPORTATION AND TRAFFIC)
subject: info:eu-repo/classification/ddc/624
subject: info:eu-repo/classification/ddc/380
subject: Civil engineering
subject: FOS: Civil engineering
subject: Commerce, communications, transport

description: Working Paper / IVT, 484
Trioza proxima Flor 1861
Creators: name: Ouvrard, David
name: Burckhardt, Daniel
name: Cocquempot, Christian
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Triozidae
Trioza
Trioza proxima

description: Trioza proxima Flor, 1861
 Trioza proxima Flor, 1861: 404.
 MATERIAL EXAMINED. — France. Alpes-Maritimes, Bolène-Vesubie, massif de la cime du Diable, 1800-2600 m, 28.VIII.1995, 1♂, I. Malenovský (MMBC); Alpes-Maritimes, La Brigue, French-Italian border between Mt Grai (2013 m) and Cime de Marte (2135 m), 21.VIII.1996, 1♀, I. Malenovský (MMBC).
DISTRIBUTION. — Fauna Europaea: Austria, Great Britain, Bulgaria, Czech Republic, France, Germany, Italy, Poland, Russia, Slovakia, Spain (Balearic Is.), Switzerland; INPN: no data; additional data from Psyl’list: Belgium, Slovenia.
COMMENTS
 Description in Hodkinson & White (1979) and Burckhardt (1983). Biology in Conci et al. (1996) and Lauterer & Malenovský (2002). Host-plants: several species of Hieracium (Asteraceae).
description: Published as part of Ouvrard, David, Burckhardt, Daniel & Cocquempot, Christian, 2015, An annotated checklist of the jumping plant-lice (Insecta: Hemiptera: Psylloidea) from the Mercantour National Park, with seven new records for France and one new synonymy, pp. 251-271 in Zoosystema 37 (1) on page 267, DOI: 10.5252/z2015n1a13, http://zenodo.org/record/5155473
Description of continuum structures in a discrete basis: Three-body resonances and two-nucleon decays
Creators: name: Casal, J.
name: Rodríguez-Gallardo, M.
name: Arias, J. M.
name: Gómez-Camacho, J.
name: Fortunato, L.
name: Vitturi, A.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: Weakly bound and unbound three-body nuclei are studied by using the pseudostate method within the hyperspherical formalism. After introducing the theoretical framework, the method is applied first to the $\boldsymbol{^9}$Be nucleus, showing a good agreement with the available data for its low-lying dipole response. Then, recent results on the structure and decay of the two-neutron emitters $\boldsymbol{^{26}}$O and $\boldsymbol{^{16}}$Be are presented. In particular, the role of the $\boldsymbol{n}$-$\boldsymbol{n}$ correlation in shaping their properties is discussed.
description: Proceedings of the 24th European Conference of Few-Body Problems in Physics (EFB24); SciPost contribution
Bubble dynamics in DNA
Creators: name: Hanke, Andreas
name: Metzler, Ralf
Publisher: name: arXiv
Year: 2003
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Quantitative Biology (q-bio)
subject: FOS: Physical sciences
subject: FOS: Biological sciences

description: The formation of local denaturation zones (bubbles) in double-stranded DNA is an important example for conformational changes of biological macromolecules. We study the dynamics of bubble formation in terms of a Fokker-Planck equation for the probability density to find a bubble of size n base pairs at time t, on the basis of the free energy in the Poland-Scheraga model. Characteristic bubble closing and opening times can be determined from the corresponding first passage time problem, and are sensitive to the specific parameters entering the model. A multistate unzipping model with constant rates recently applied to DNA breathing dynamics [G. Altan-Bonnet et al, Phys. Rev. Lett. 90, 138101 (2003)] emerges as a limiting case.
description: 9 pages, 2 figures
The complete chloroplast genome and phylogenetic analysis of Stewartia sichuanensis (Theaceae), a Chinese endemic tree with narrow distribution
Creators: name: Lin, Han-Yang
name: Cai, Chao-Nan
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Plant Biology
subject: Virology

description: Stewartia sichuanensis is a rare plant species of Theaceae and is endemic to China. Its distribution area is highly restricted, and genomic information is extremely limited. The present study reports the first complete chloroplast of S. sichuanensis. The chloroplast genome length was 158,903 bp, with a GC content of 37.3%. The chloroplast genome was comprised of an 87,736 bp long large single copy (LSC), an 18,435 bp long small single copy (SSC), and two copies of inverted repeat (IR) regions of 26,366 bp. It contained 129 genes, including 85 encoding, 36 transfer RNA, and eight ribosomal RNA genes. The phylogenetic analysis suggested that S. sichuanensis was closely related to S. laotica and S. pteropetiolata.
Trioza rhamni
Creators: name: Ouvrard, David
name: Burckhardt, Daniel
name: Cocquempot, Christian
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Triozidae
Trioza
Trioza rhamni

description: Trioza rhamni (Schrank, 1801)
 Chermes rhamni Schrank, 1801: 141.
 MATERIAL EXAMINED. — France. Alpes-Maritimes, Saint-Dalmasle-Selvage, M09-SES1400-T1-M2, 1♀ (MNHN).
DISTRIBUTION. — Fauna Europaea: Austria, Czech Republic, Denmark, Finland, France, Germany, Great Britain, Italy, Moldova, Norway, Poland (doubtful), Romania, Russia, Slovakia, Spain, Sweden, Switzerland, Ukraine; INPN: no data; additional data from Psyl’list: Caucasus, Estonia, Hungary, Latvia, Slovenia, Turkey.
COMMENTS
 Description in Hodkinson & White (1979a) and Ossiannilsson (1992). Biology in Ossiannilsson (1992), Conci et al. (1996) and Lauterer (1999). Host-plants: Rhamnus cathartica L. and Rhamnus pallasii Fisch. & C. A. Mey. (Rhamnaceae).
description: Published as part of Ouvrard, David, Burckhardt, Daniel & Cocquempot, Christian, 2015, An annotated checklist of the jumping plant-lice (Insecta: Hemiptera: Psylloidea) from the Mercantour National Park, with seven new records for France and one new synonymy, pp. 251-271 in Zoosystema 37 (1) on page 267, DOI: 10.5252/z2015n1a13, http://zenodo.org/record/5155473
Silicon-vacancy color centers in phosphorus-doped diamond
Creators: name: Flatae, Assegid Mengistu
name: Lagomarsino, Stefano
name: Sledz, Florian
name: Soltani, Navid
name: Nicley, Shannon S.
name: Haenen, Ken
name: Rechenberg, Robert
name: Becker, Michael F.
name: Sciortino, Silvio
name: Gelli, Nicla
name: Giuntini, Lorenzo
name: Taccetti, Francesco
name: Agio, Mario
Publisher: name: arXiv
Year: 2019
Subjects: subject: Applied Physics (physics.app-ph)
subject: Materials Science (cond-mat.mtrl-sci)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The controlled creation of color centers in phosphorus-doped (n-type) diamond can facilitate the electronics integration of quantum photonics devices, such as single-photon sources operating upon electrical injection. Silicon vacancy (SiV) color centers are promising candidates, but so far the conditions for single-photon emission in phosphorus-doped diamond have not been investigated. In this study, we create SiV color centers in diamond samples with different phosphorus concentrations and show that the fluorescence background due to doping, nitrogen-impurities and ion implantation induced defects can be significantly suppressed. Single-photon emitters in phosphorus-doped diamond are obtained at the low Si-ion implantation fluences.
The complete plastome sequence of Momordica cochinchinensis (Cucurbitaceae)
Creators: name: Cai, Lijuan
name: Pan, Rao
name: Zeng, Qun
name: Zhang, Xiaoyan
name: Zeng, Rongbin
name: Zhu, Qianglong
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Virology

description: Momordica cochinchinensis (Lour.) Spreng. is an important medicinal plant that is used to treat various diseases in South and Southeast Asia. In this study, the complete plastome of M. cochinchinensis was sequenced and found to exhibit a total length of 158,955 bp, with a large single copy (LSC) region of 87,924 bp and a small single copy (SSC) region of 18,479 bp, as well as with two inverted repeats (IRs) that were both 26,726 bp in length. In total, 129 genes were detected, comprising 86 protein-encoding genes, 8 ribosomal RNA (rRNA) genes, and 35 transfer RNA (tRNA) genes. Furthermore, the inferred phylogenetic tree confirmed that M. cochinchinensis belongs to the genus Momordica in the Cucurbitaceae family. The research results will be used for authenticating M. cochinchinensis plant materials and for analyzing the genetic diversity and phylogenetic relationships in Momordica.
Additional file 1 of A cost-sensitive online learning method for peptide identification
Creators: name: Liang, Xijun
name: Xia, Zhonghang
name: Jian, Ling
name: Wang, Yongxiang
name: Niu, Xinnan
name: Link, Andrew J.
Publisher: name: figshare
Year: 2020
Subjects: subject: Artificial Intelligence and Image Processing
subject: FOS: Computer and information sciences

description: Additional file 1 Additional results. The derivation of iteration formulae of OLCS-Ranker and some additional results.
Semiclassical String Solutions on deformed NS5-brane Backgrounds and New Plane wave
Creators: name: Alishahiha, Mohsen
name: Mosaffa, Amir E.
Publisher: name: arXiv
Year: 2003
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We study different Penrose limits of supergravity solution of NS5-brane in the presence of RR field. Although in the case of NS5-brane we get a 4-dimensional plane wave, in the case with RR field we will get two different plane waves; a 4-dimensional and a 3-dimensional one. These plane wave solutions are the backgrounds that a particular string solution feels at one loop approximation. Using the one loop correction one can identify a particular subsector of LST/deformed LST which is dual to type II string theories on these plane waves.
description: 18 pages, latex, v2: Minor changes, typos corrected
Trioza rumicis Low 1880
Creators: name: Ouvrard, David
name: Burckhardt, Daniel
name: Cocquempot, Christian
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Triozidae
Trioza
Trioza rumicis

description: Trioza rumicis Löw, 1880
 Trioza rumicis Löw, 1880: 557.
 MATERIAL EXAMINED. — France. Alpes-Maritimes, Saorge, M 10- CAI2000-T7-M1, 1♀ (MNHN); Alpes-Maritimes, Bolène-Vesubie, massif de la cime du Diable, 1800-2600 m, 28.VIII.1995, 1♀ I. Malenovský (MMBC); Alpes-Maritimes, La Brigue, French-Italian border between Mt Grai (2013 m) and Cime de Marte (2135 m), 21.VIII.1996, 5♂, 3♀, I. Malenovský (MMBC).
DISTRIBUTION. — Fauna Europaea: Austria, France, Germany, Italy, Poland, Romania, Slovakia, Switzerland; INPN: no data; additional data from Psyl’list: Iran.
COMMENTS
 Description in Dobreanu & Manolache (1962) and Klimaszewski (1967). Biology in Conci et al. (1996). Host-plants: several species of Rumex (Polygonaceae).
description: Published as part of Ouvrard, David, Burckhardt, Daniel & Cocquempot, Christian, 2015, An annotated checklist of the jumping plant-lice (Insecta: Hemiptera: Psylloidea) from the Mercantour National Park, with seven new records for France and one new synonymy, pp. 251-271 in Zoosystema 37 (1) on page 268, DOI: 10.5252/z2015n1a13, http://zenodo.org/record/5155473
Beyond The Wall Street Journal: Anchoring and Comparing Discourse Signals across Genres
Creators: name: Liu, Yang
Publisher: name: arXiv
Year: 2019
Subjects: subject: Computation and Language (cs.CL)
subject: FOS: Computer and information sciences

description: Recent research on discourse relations has found that they are cued not only by discourse markers (DMs) but also by other textual signals and that signaling information is indicative of genres. While several corpora exist with discourse relation signaling information such as the Penn Discourse Treebank (PDTB, Prasad et al. 2008) and the Rhetorical Structure Theory Signalling Corpus (RST-SC, Das and Taboada 2018), they both annotate the Wall Street Journal (WSJ) section of the Penn Treebank (PTB, Marcus et al. 1993), which is limited to the news domain. Thus, this paper adapts the signal identification and anchoring scheme (Liu and Zeldes, 2019) to three more genres, examines the distribution of signaling devices across relations and genres, and provides a taxonomy of indicative signals found in this dataset.
description: 10 pages. In Proceedings of 7th Workshop on Discourse Relation Parsing and Treebanking (DISRPT) at NAACL-HLT 2019, Minneapolis, MN
Zeeman and Orbital Limiting Fields: Separated Spin and Charge Degrees of Freedom in Cuprate Superconductors
Creators: name: Krusin-Elbaum, L.
name: Blatter, G.
name: Shibauchi, T.
Publisher: name: arXiv
Year: 2004
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: Recent in-plane thermal (Nernst) and interlayer (tunnelling) transport experiments in Bi$_2$Sr$_2$CaCu$_2$O$_{8+y}$ high temperature superconductors report hugely different limiting magnetic fields. Based on pairing (and the uncertainty principle) combined with the definitions of the Zeeman energy and the magnetic length, we show that in the underdoped regime both fields convert to the same (normal state) pseudogap energy scale $T^*$ upon transformation as orbital and spin (Zeeman) critical fields, respectively. We reconcile these seemingly disparate findings invoking separated spin and charge degrees of freedom residing in different regions of a truncated Fermi surface.
description: 4 pages, 3 figures; accepted for publication in Phys. Rev. B (Rapid Comm.)
Active Brownian Heat Engines
Creators: name: Holubec, Viktor
name: Steffenoni, Stefano
name: Falasco, Gianmaria
name: Kroy, Klaus
Publisher: name: arXiv
Year: 2020
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: When do non-equilibrium forms of disordered energy qualify as heat? \textcolor{blue}{We address this question in the context of cyclically operating heat engines in contact with a non-equilibrium energy reservoir that defies the zeroth law of thermodynamics. To consistently address the latter as a heat bath requires the existence of a precise mapping to an equivalent cycle with an equilibrium bath at a time-dependent effective temperature. We identify the most general setup for which this can generically be ascertained and thoroughly discuss an analytically tractable, experimentally relevant scenario}: a Brownian particle confined in a \textcolor{blue}{periodically} modulated harmonic potential and coupled to some non-equilibrium bath of variable activity. We deduce formal limitations for its thermodynamic performance, including maximum efficiency, efficiency at maximum power, and maximum efficiency at fixed power. They can guide the design of new micro-machines and clarify how much these can outperform passive-bath designs, which has been a debated issue for recent experimental realizations. To illustrate the general principles for practical quasi-static and finite-rate protocols, we further analyze a specific realization of such an active heat engine based on the paradigmatic Active Brownian Particle (ABP) model. This reveals some non-intuitive features of the explicitly computed dynamical effective temperature, illustrates various conceptual and practical limitations of the effective-equilibrium mapping, and clarifies the operational relevance of various coarse-grained measures of dissipation.
description: 26 pages, 12 figures
The complete chloroplast genome sequence of Centaurea cyanus (Asteraceae)
Creators: name: Zhang, NingYun
name: Xie, Peng
name: Huang, Kerui
name: Yin, Hanbin
name: Mo, Ping
name: Wang, Yun
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Biophysics
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Plant Biology

description: Centaurea cyanus has been a weed in farmland for a long time. In this study, the chloroplast genome of C. cyanus was sequenced to establish the phylogenetic relationship between its genomic characteristics and other related species. The chloroplast gene structure of C. cyanus is a circular molecule with a length of 152,433 bp, including a large single-copy (LSC) region of 83,464 bp, a small single-copy (SSC) region of 18,545 bp, and a pair of inverted repeats sequences (IRs) region of 25,212 bp. The whole genome contains 130 genes, including 86 protein-coding genes, 36 tRNA genes, and eight rRNA genes. Phylogenetic analysis showed that C. cyanus is close to Carthamus. tinctorius, C. tinctorius, C. diffusa, and C. maculosa, and all of them were in one clade. This study provides genetic resource information for the further study of Centaurea.
Quantum creep and quantum creep transitions in 1D sine-Gordan chains
Creators: name: Krajewski, Florian R.
name: Müser, Martin H.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Discrete sine-Gordon (SG) chains are studied with path-integral molecular dynamics. Chains commensurate with the substrate show the transition from collective quantum creep to pinning at bead masses slightly larger than those predicted from the continuous SG model. Within the creep regime, a field-driven transition from creep to complete depinning is identified. The effects of disorder in the external potential on the chain's dynamics depend on the potential's roughness exponent $H$, i.e., quantum and classical fluctuations affect the current self-correlation functions differently for $H = 1/2$.
description: 4 pages, 3 figures
title: Nb3Sn Coating of Complex SRF Cavity Structures
Creators: name: Tiskumara, Jayendrika
Publisher: name: Old Dominion University Libraries
Year: 2021

description: In the modern SRF research, Thin films coated niobium cavities are used for the low cost and increased quality factor. Among the potential thin film materials applied on the niobium, performances demonstrated by the Nb3Sn cavities makes this material attractive for SRF accelerator applications giving higher critical temperature and higher accelerating gradients. While the majority of research efforts are currently focused on the development of elliptical single-cell and multi-cell cavities, the potential of this material is evident to other cavity types, which may have complex geometries. We are working towards the development of Nb3Sn-coated Half-wave resonator and twin axis cavity at JLab.