cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1: of Anti-pancreatic tumor efficacy of a Listeria-based, Annexin A2-targeting immunotherapy in combination with anti-PD-1 antibodies
Creators: name: Kim, Victoria
name: Blair, Alex
name: Lauer, Peter
name: Foley, Kelly
name: Che, Xu
name: Soares, Kevin
name: Xia, Tao
name: Muth, Stephen
name: Kleponis, Jennifer
name: Armstrong, Todd
name: Wolfgang, Christopher
name: Jaffee, Elizabeth
name: Brockstedt, Dirk
name: Zheng, Lei
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Medicine
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Figure S1. Murine and human ANXA2 protein sequences. Brackets note differences. Figure S2. Sequential weights in mice following (A) Empty-Lm or (B) Lm-ANXA2. (C) Serum AST and ALT levels in mice following Empty-Lm or Lm-ANXA2 were measured at SRI Biosciences’ Clinical Analysis Laboratory. 95% CI of normal values notated. ALT was within normal limits despite significant difference in the Lm-ANXA2 group. Figure S3. Hemispleen mice underwent treatment with Empty-Lm or Lm-ANXA2 with or without CD8+ depletion. (A) No significant difference in survival comparing untreated mice to mice treated Empty-Lm and CD8+ depletion or mice treated with Lm-ANXA2 and CD8+ depletion. (B) No significant difference in survival in mice treated with Empty-Lm without CD8+ depletion compared to Empty-Lm and CD8+ depletion. Figure S4. Gene expression analysis via qPCR of inflammatory cytokines of TIL isolated from spontaneously developed PDACs in KPC mice following treatment with Empty-Lm, Lm-ANXA2 and Lm-ANXA2 + anti-PD-1. No significance comparing Untreated and Empty-Lm in all genes. No significance comparing Lm-ANXA2 and Lm-ANXA2 + anti-PD-1 in all genes, except for IFNβ. Figure S5. Ultrasound measurements of (A) untreated, (B) Empty-Lm and (C) Lm-ANXA2+anti-PD-1 treated KPC mice. Day 22 notated. Figure S6. Maximal tumor volume reduction from peak tumor size to lowest post-peak tumor size was measured and compared between untreated, Empty-Lm, and Lm-ANXA2+anti-PD-1 treated KPC mice. Figure S7. Heterogenic immunohistochemistry expression of ANXA2 in KPC mice: 40% of KPC tumors with low and 60% high expression. Figure S8. CD8+ cells were isolated from TIL after hemispleen procedure and co-cultured with peptide-pulsed T2-cells. IFNγ expression of Empty-Lm vs. Lm-ANXA2 exposed to (A) Kb-T2 and (B) Db-T2-cells stimulated with corresponding pooled-peptide groups. ELISA repeated with anti-PD-1 treatment. IFNγ expression of treatment groups exposed to Kb-T2 and (C) peptide group #1, (D) #2 or (E) #4. Db-T2-cells stimulated with (F) peptide groups #1, (G) #2, (H) #3, or (I) #4. Table S1. Overlapping peptide groups of ANXA2. (DOCX 4947 kb)
Additional file 1: of An analysis of the foot in turnout using a dance specific 3D multi-segment foot model
Creators: name: Carter, Sarah
name: Bryant, Alan
name: Hopper, Luke
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Marine Biology

description: The intra- and inter-assessor repeatability of the first MTPJ abduction angle. (DOCX 15 kb)
Diatrype Fr., Summa 1849
Creators: name: Dayarathne, Monika C.
name: Wanasinghe, Dhanushka N.
name: Devadatha, B.
name: Abeywickrama, Pranami
name: G, E. B.
name: Jones, areth
name: Chomnunti, Putarak
name: Sarma, V. V.
name: Hyde, Kevin D.
name: Lumyong, Saisamorn
name: C., Eric H.
name: Mckenzie
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Fungi
Ascomycota
Dothideomycetes
Pleosporales
Teichosporaceae
Diatrype

description: Diatrype Fr.
 Summa vegetabilium Scandinaviae: 384 (1849).   NOTES
 Diatrype was established byFries (1849) with Diatrype disciformis as the type species. The genus occurs widely on decaying wood. Several species are reported as canker forming pathogens on forest trees (Senanayake et al. 2015). Species in this genus are resistant to harsh conditions. The asexual morph of Diatrype is reported as libertella-like and dumortieria-like (Kirk et al. 2008; Wijayawardene et al. 2012; Maharachchikumbura et al. 2015, 2016; Senanayake et al. 2015). There are no previous records of Diatrype species from marine based habitats.
description: Published as part of Dayarathne, Monika C., Wanasinghe, Dhanushka N., Devadatha, B., Abeywickrama, Pranami, G, E. B., Jones, areth, Chomnunti, Putarak, Sarma, V. V., Hyde, Kevin D., Lumyong, Saisamorn, C., Eric H. & Mckenzie, 2020, Modern taxonomic approaches to identifying diatrypaceous fungi from marine habitats, with a novel genus Halocryptovalsa Dayarathne & K. D. Hyde, gen. nov., pp. 21-67 in Cryptogamie, Mycologie 20 (3) on page 46, DOI: 10.5252/cryptogamie-mycologie2020v41a3, http://zenodo.org/record/7815042
Factorial moment analyses in diffractive lepton-nucleon scattering
Creators: name: Yang, Zhang
Publisher: name: arXiv
Year: 1997
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: It is pointed out that "the colorless objects" in diffractive lepton-nucleon scattering in the small-$x_B$ region can be probed by measuring the scaled factorial moments of final-state-hadrons and the dependence of their scaling behavior upon the diffractive kinematic variables. The Monte Carlo implementation of RAPGAP and JETSET are discussed as illustrative examples. The results of these model-calculations show in particular that inclusion of the contributions from the gamma gluon fusion processes can considerably enlarge the power of the scaled factorial moments. The possibility for probing the anomalous scaling behaviors of probability moments of the transverse energies in HERA calorimeter environment is also discussed.
description: 12 pages, 5 Postscript figures
Additional file 2 of Identification and analysis of structurally critical fragments in HopS2
Creators: name: Borah, Sapna
name: Jha, Anupam
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: 60506 Virology

description: : Figure S1. Phylogenetic analysis of Hop protein family. (PDF 115 kb)
title: Cell Signaling Analysis of Metastatic Triple Negative Breast Cancer Following Dual PI3K/mTOR Inhibitor (PIKTOR)
Creators: name: Nguyen, Tuong Vi V
Publisher: name: George Mason University
Year: 2021
Subjects: subject: Triple negative breast cancer
subject: PI3K/ mTOR
subject: Phase II clinical trial
subject: Personalized medicine
subject: Dual inhibitor
subject: PIKTOR

description: This thesis has been embargoed for 2 years. It will not be available until April 2023 at the earliest.
description: Triple negative breast cancer (TNBC) is defined by deficient estrogen, progesterone and HER2 receptor expression, excluding TNBC patients from effective targeted therapies for breast cancer. Advancement in targeted therapy for pro-survival pathways like PI3K/AKT/mTOR (PAM) and mitogen activated protein kinase (MAPK), has shown to improve outcomes for select TNBC patients. However, targeted therapies have not produced complete responses in the majority of patients and there is high degree of systemic relapse following conventional neoadjuvant chemotherapy, resulting in overall low therapeutic response for TNBC patients. Here we aimed to identify patterns of expression in responders vs non-responders by examining the signaling profile of metastatic (met) TNBC patients following targeted therapy against the PAM pathway. Ten patients were given an investigational oral combination of TAK-117 and TAK-228 (PIKTOR), a selective PI3Kα inhibitor and a TORC1/2 inhibitor respectively, predicted to impair DNA damage repair (DDR) pathways, increasing genomic instability and tumor sensitivity to chemotherapy. The hypothesis was successful inhibition of the PAM pathway by PIKTOR could downregulate effectors/modulator proteins of NHEJ in HRD cells. Signaling profile of pre- and post-tumor biopsy samples following PIKTOR were mapped via RPPA. Overall analysis showed heterogeneity of disease and response to treatment. The proteomic profile indicated compensatory signaling in response to treatment via upregulation of partnering MAPK pathway or upstream RTKs. Heterogenous signaling in DDR signaling pathway suggest a nonspecific stress response by TNBC tumors, unlikely to correlate DDR deficiency to patient treatment response. Pathway expression analysis of metTNBC patients at baseline and post-PIKTOR therapy highlighted key nodes in the pathway which have the potential to contribute to disease relapse. Data generated from this study could elucidate common pathway of resistance accessible for future treatments and help guide future therapeutic discoveries for advanced, metTNBC.
Two-dimensional array of diffusive SNS junctions with high-transparent interfaces
Creators: name: Baturina, Tatyana. I.
name: Kvon, Z. D.
name: Plotnikov, A. E.
Publisher: name: arXiv
Year: 2000
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We report the first comparative study of the properties of two-dimensional arrays and single superconducting film - normal wire - superconducting film (SNS) junctions. The NS interfaces of our SNS junctions are really high transparent, for superconducting and normal metal parts are made from the same material (superconducting polycrystalline PtSi film). We have found that the two-dimensional arrays reveal some novel features: (i) the significant narrowing of the zero bias anomaly (ZBA) in comparison with single SNS junctions, (ii) the appearance of subharmonic energy gap structure (SGS), with up to n=16 (eV=\pm 2Δ/n), with some numbers being lost, (iii) the transition from 2D logarithmic weak localization behavior to metallic one. Our experiments show that coherent phenomena governed by the Andreev reflection are not only maintained over the macroscopic scale but manifest novel pronounced effects as well. The behavior of the ZBA and SGS in 2D array of SNS junctions strongly suggests that the development of a novel theoretical approach is needed which would self-consistently take into account the distribution of the currents, the potentials, and the superconducting order parameter.
description: RevTex, 5 pages, 5 figures
Training Plan
Creators: name: Fugmann, Gerlis
name: Schneider, Andrea
name: Bojovic, Dragana
name: Terrado, Marta
name: Johannsson, Halldor
name: Cristini, Luisa
Publisher: name: Zenodo
Year: 2019

description: This training plan describes the components of and the plans for education activities included in WP7 of APPLICATE. To optimize the efforts, the training plan has been prepared at the beginning of the project, outlining not only the activities itself, but plans for their implementation as well as the expected risks and interdependencies. The major training activities planned include (1) a webinar series on the APPLICATE project and on the impact of Arctic changes on the weather and climate of the Northern hemisphere, (2) a summer school planned for 2018 on polar prediction with instruction in both modeling and observational methods, (3) an online course entitled „Advancing Predictive Capability of Northern Hemisphere Weather and Climate.“ This document provides details on both the planned activities themselves and the approach by which they will be accomplished. The webinar series was held in fall 2017 and served as an introduction for the APPLICATE project to the early career polar science community. The summer school was based on a previously-run school organized by the Year of Polar Prediction. It took place at Abisko Station, Sweden, from 17 - 27 April 2018. The school was organized by a project manager based at UiT, with help from APPLICATE members, other partners and volunteers from the Association of Polar Early Career Scientists (APECS). Finally, the online course will run from September to December 2019 with the aim to train early career researchers and prepare them for careers in Northern Hemisphere prediction science.
Additional file 3 of Identification and analysis of structurally critical fragments in HopS2
Creators: name: Borah, Sapna
name: Jha, Anupam
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Physiology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: Inorganic Chemistry
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: : Figure S2: Comparison of amino acid composition (in %) of HopS2 and Hop family sequences. The composition is represented both for the full sequence and in N-terminal (60 residues). The blue and turquoise coloured bar details the amino acid composition of full length sequence of HopS2 and 38 other Hop proteins respectively. The yellow and red bars are the N-terminal compositions of HopS2 and the averaged composition of 38 Hop proteins respectively. (PDF 126 kb)
Leveraging Deep Graph-Based Text Representation for Sentiment Polarity Applications
Creators: name: Bijari, Kayvan
name: Zare, Hadi
name: Kebriaei, Emad
name: Veisi, Hadi
Publisher: name: arXiv
Year: 2019
Subjects: subject: Computation and Language (cs.CL)
subject: Machine Learning (cs.LG)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: Over the last few years, machine learning over graph structures has manifested a significant enhancement in text mining applications such as event detection, opinion mining, and news recommendation. One of the primary challenges in this regard is structuring a graph that encodes and encompasses the features of textual data for the effective machine learning algorithm. Besides, exploration and exploiting of semantic relations is regarded as a principal step in text mining applications. However, most of the traditional text mining methods perform somewhat poor in terms of employing such relations. In this paper, we propose a sentence-level graph-based text representation which includes stop words to consider semantic and term relations. Then, we employ a representation learning approach on the combined graphs of sentences to extract the latent and continuous features of the documents. Eventually, the learned features of the documents are fed into a deep neural network for the sentiment classification task. The experimental results demonstrate that the proposed method substantially outperforms the related sentiment analysis approaches based on several benchmark datasets. Furthermore, our method can be generalized on different datasets without any dependency on pre-trained word embeddings.
description: 33 pages, 6 figures, 6 Tables, Accepted for publication in Expert Systems With Applications Journal
title: ADCO, Cartulaire de l'abbaye de Cîteaux dit Cartulare Antiquum t.3 (2e moitié XIIIe siècle), Cart. 168 (11 H 66), f. 0082r
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2010
name: Petot, Frédéric
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: cartulaire

description: Cartulaire de l'abbaye de Cîteaux dit Cartulare Antiquum t.3 (2e moitié XIIIe siècle), Archives départementales de la Côte-d'Or, Cart. 168 (11 H 66), f. 0082r, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire de l'abbaye de Cîteaux dit Cartulare Antiquum t.3 (2e moitié XIIIe siècle), Archives départementales de la Côte-d'Or, Cart. 168 (11 H 66), f. 0082r, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
Theoretical study of hydrogen-covered diamond (100) surfaces: A chemical potential analysis
Creators: name: Hong, Suklyun
name: Chou, M. Y.
Publisher: name: arXiv
Year: 1996
Subjects: subject: Condensed Matter (cond-mat)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The bare and hydrogen-covered diamond (100) surfaces were investigated through pseudopotential density-functional calculations within the local-density approximation. Different coverages, ranging from one to two, were considered. These corresponded to different structures including 1x1, 2x1, and 3x1, and different hydrogen-carbon arrangements including monohydride, dihydride, and configurations in between. The formation energy of each phase was expressed as a function of hydrogen chemical potential. As the chemical potential increased, the stable phase successively changed from bare 2x1 to (2x1):H, to (3x1):1.33H, and finally to the canted (1x1):2H. Setting the chemical potential at the energy per hydrogen in H$_2$ and in a free atom gave the (3x1):1.33H and the canted (1x1):2H phase as the most stable one, respectively. However, after comparing with the formation energy of CH$_4$, only the (2x1):H and (3x1):1.33H phases were stable against spontaneous formation of CH$_4$. The former existed over a chemical potential range ten times larger than the latter, which may explain why the latter, despite of having a low energy, has not been observed so far. Finally, the vibrational energies of the C-H stretch mode were calculated for the (2x1):H phase.
description: 8 pages, single uuencoded postscript file, submitted to Phys.Rev.B
Scale-invariant alternatives to general relativity. III. The inflation--dark-energy connection
Creators: name: Casas, Santiago
name: Karananas, Georgios K.
name: Pauly, Martin
name: Rubio, Javier
Publisher: name: arXiv
Year: 2018
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We discuss the cosmological phenomenology of biscalar-tensor models displaying a maximally symmetric Einstein-frame kinetic sector and constructed on the basis of scale symmetry and volume-preserving diffeomorphisms. These theories contain a single dimensionful parameter $Λ_0$-associated with the invariance under the aforementioned restricted coordinate transformations-and a massless dilaton field. At large field values these scenarios lead to inflation with no generation of isocurvature perturbations. The corresponding predictions depend only on two dimensionless parameters, which characterize the curvature of the field--manifold and the leading order behavior of the inflationary potential. For $Λ_0=0$ the scale symmetry is unbroken and the dilaton admits only derivative couplings to matter, evading all fifth force constraints. For $Λ_0\neq 0$ the field acquires a run-away potential that can support a dark energy dominated era at late times. We confront a minimalistic realization of this appealing framework with present data sets. The impact of possible consistency relations among the early and late Universe dynamics that could appear within this setting is also discussed.
description: Journal version---discussion extended, typos corrected, references added
Magnetomechanics of mesoscopic wires
Creators: name: Blom, Sara
Publisher: name: arXiv
Year: 1999
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We have studied the force in mesoscopic wires in the presence of an external magnetic field along the wire using a free electron model. We show that the applied magnetic field can be used to affect the force in the wire. The magnetic field breaks the degeneracy of the eigenenergies of the conduction modes, resulting in more structure in the force as a function of wire length. The use of an external magnetic field is an equilibrium method to control the number of transporting channels. Under the least favorable circumstances (on the middle of a low conduction step) one needs about 1.3 T, for a mesoscopic Bismuth wire, to see an abrupt change in the force, at fixed wire length.
description: 4 pages, 5 figures
On the odderon intercept in QCD
Creators: name: Armesto, N.
name: Braun, M. A.
Publisher: name: arXiv
Year: 1997
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The odderon singularity is studied in perturbative QCD in the framework of the Bartels-Kwieciński-Praszalowicz (BKP) equation. Arguments for the odderon intercept being exactly equal to unity are given. Besides, a variational method based on a complete system of one-gluon functions is presented. For the odderon, the highest intercept calculated by this method is $1-(N_cα_{s}/π) 0.45$. Comparison to other calculations is shown.
description: 9 pages in LaTeX; presented by N. Armesto at the Madrid Workshop on low x Physics (Miraflores de la Sierra, Spain, June 18th-21st 1997)
title: Does Social Disorganization Impact Individuals’ Fear of Crime? Results from a Community Survey
Creators: name: Nichols, Jordan
Publisher: name: George Mason University
Year: 2021
Subjects: subject: Fear of crime
subject: Social disorganization
subject: Neighborhood effects
subject: Fear

description: This document has been embargoed for 5 years and will not be available until November 2021 at the earliest.
description: This study uses individual characteristics and indicators of social disorganization to model the variation in fear of crime in Fairfax County, Virginia. While the theory of social disorganization is traditionally employed to explain the presence of crime and deviance, I utilize the model to better understand variations in fear of crime among individuals. Disorganization is assessed indirectly by measuring its neighborhood-level determinants and is supplemented by four direct measures—the ability of a community to supervise teen peer groups, loitering, graffiti, and consumption of alcohol in public spaces. The study relies on data from the Center for Evidence-Based Crime Policy’s (CEBCP) Fairfax Community Survey, the U.S. Census American Community Survey, and the Fairfax County Police Department. While some of the individual-level variables significantly predict general fear of crime and fear of burglary and robbery, the intervening dimensions of social disorganization were most important in increasing the explanatory power of the models.
Spin waves near the edge of halogen substitution induced magnetic order in Ni(Cl$_{1-x}$Br$_x$)$_2$$\cdot$4SC(NH$_2$)$_2$
Creators: name: Mannig, A.
name: Povarov, K. Yu.
name: Ollivier, J.
name: Zheludev, A.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We report an inelastic neutron scattering study of magnetic excitations in a quantum paramagnet driven into a magnetically ordered state by chemical substitution, namely Ni(Cl$_{1-x}$Br$_x$)$_2$$\cdot$4SC(NH$_2$)$_2$ with $x=0.21(2)$. The measured spectrum is well accounted for by the generalized spin wave theory (GSWT) approach [M. Matsumoto and M. Koga, [J. Phys. Soc. Jap. 76, 073709 (2007)]. This analysis allows us to determine the effective Hamiltonian parameters for a direct comparison with those in the previously studied parent compound and `underdoped' system. The issue of magnon lifetimes due to structural disorder is also addressed.
description: 8 pages, 7 figures
title: Paper: "Lattices as Fundamental Spaces: Grahpical Representations of Complex Models," 1995
Creators: name: Warfield, John
Publisher: name: George Mason University
Year: 1995
Subjects: subject: Warfield, John N.
subject: Lattices
subject: Friedman, George
subject: LAG models
subject: Constraint Theory

description: Manuscript: typescript with tables and symbols, 14 pgs. 8.5" x 11" (21.6 cm x 29.7 cm)
description: In this paper, Warfield proposes that the mathematical lattice and its graphical map counterpart, the "closed hierarchy", have a powerful role to play in representing and interpreting models. John N. Warfield Collection 92.4
Non-Abelian Equilibration in Heavy Ion Collisions
Creators: name: Wong, S. M. H.
Publisher: name: arXiv
Year: 1997
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The uncertainty in the equilibration in heavy ion collisions due to the choice of the value of the coupling is examined. The results of the equilibration are indeed affected by this choice. In particular, a variation of $\a_s$ from 0.3 to 0.5 reduces the parton phase of the plasma by as much as 4.0 fm/c and increasing coupling causes a reduction in the generated entropy. As far as equilibration is concerned, larger coupling results in faster equilibration both chemically and kinetically but improvements only happen to the fermions. These are accompanied by more rapid cooling and therefore shortened lifetime. In the light of these results, to choose $\a_s$ is almost equivalent to choosing the results. Also because of consistency, any fixed $\a_s$ is incompatible with an evolving plasma. The best choice is therefore not to choose at all but let the system makes its own decision. We show a simple recipe how this can be done. With an evolving coupling, equilibration is accelerated with better results at the expense of the duration of the deconfined phase.
description: 6 pages, Talk presented at the 32nd Rencontres de Moriond, March 97, Les Arcs, France
User Engagement Plan
Creators: name: Bojovic, Dragana
name: Terrado, Marta
name: Johannsson, Halldor
name: Fugmann, Gerlis
name: Cristini, Luisa
Publisher: name: Zenodo
Year: 2019

description: The main objective of the APPLICATE project is to develop enhanced predictive capacity for weather and climate in the Arctic and beyond, and to determine the influence of Arctic climate change on the Northern Hemisphere. To produce usable and trustworthy predictive information for decision making, APPLICATE will actively engage with stakeholders, including policy makers, businesses and society within and outside the EU. Only by effectively exchanging information with stakeholders and co-developing knowledge, can we assure the stakeholder-relevance of the project results and its impact by enhancing their capacity to adapt to long-term climate change.
 The proactive dialogue with users is being performed using modern and interactive user engagement mechanisms that are being developed and maintained throughout the project. This updated plan describes already applied engagement approaches and activities, as well as those planned for the rest of the project. It provides a detailed description of the three main user categories defined by the project – key, primary and secondary. It builds around four main mechanisms of user engagement to be applied in the project: i) User Group involvement, ii) Participation in relevant conferences and meetings and organization of workshops, iii) Case studies development, iv) User blog and interviews. Dedicated policy events will be held in Brussels (first half 2020), in Akureyri, Iceland, at the
 Arctic Science Summit Week (ASSW) in March 2020 and at the Third Science Ministerial in Japan November 2020.
 In addition, different communication channels are being utilized as a part of the project, enhancing information exchange, knowledge transfer and impact, presenting the first step towards user engagement, reaching and impacting a broad and diverse group of users.
title: Chapter: E. M. Risse, "Chapter 11: Small Privately Financed New Communities - Their Place in the New Towns Movement," January 5, 1988
Creators: name: Risse, E. M.
Publisher: name: George Mason University
Year: 2007
Subjects: subject: Burke (VA)
subject: Greenbelt (MD)
subject: New communities

description: Textual: Letter, typescript original; 11” x 8.5” (27.9 cm x 21.6 cm)
description: Excerpt of a book chapter, titled New Town Planning and the Garden City/Greenbelt Ideal, by E. M. Risse entitled "Chapter 11: Small Privately Financed New Communities - Their Place in the New Towns Movement" dated January 5, 1988. This chapter specifically focuses on the development of Burke Centre in Burke, Virginia, but makes mention of Greenbelt, Maryland. This is the fourth draft of this chapter, and the draft includes a coversheet describing edits made and to be made on the chapter. This chapter was included in The Shape of the Future published in 2000. Planned Community Archives Collection, 638.01.04
Clustering Plan
Creators: name: Jung, Thomas
name: Day, Jonathan
name: Cristini, Luisa
Publisher: name: Zenodo
Year: 2019

description: There are a number of European and international activities that are related to some of the activities planned in APPLICATE. Effective clustering is needed in APPLICATE to facilitate coordination and exploit synergies. To ensure effective collaboration with partners from Europe, North America and the wider international community, this document contains an updated Clustering Plan that was developed together with the partners in the context of the APPLICATE project. The strategy employed here is to focus on a limited number of clustering activities that are given full attention to make a difference.
Model Averaging Using Likelihoods That Reflect Poor Outcomes for Clinical Trial Dropouts
Creators: name: Liu, G. Frank
name: Liu, Fang
name: Mehrotra, Devan V.
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: Information Systems not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Virology
subject: Computational Biology

description: Despite efforts undertaken to prevent missing data in clinical trials, it is still inevitable to have some missing data due to various reasons. For example, some patients drop out due to lack of efficacy or tolerability issues. Their “true” but unobserved end-of-study outcomes are likely worse than the observed outcomes for completers because dropouts stop taking their assigned therapy. For a binary endpoint, a “dropout equals failure” approach has been widely applied. However, there is no similar approach for a continuous endpoint. Commonly used mixed model repeated measures (MMRM) analyses or multiple imputation methods require a missing at random assumption which may not realistically reflect the poor response for dropouts. We propose a model averaging approach using likelihoods that assume all missing outcomes are worse than the observed outcomes for each treatment group. The estimated treatment difference is obtained as a weighted average of the estimates derived from likelihood functions with a single normal distribution and a mixture of two normal distributions. Simulations are used to compare our proposed method with a quantile regression approach using trimmed means and medians. Applications to clinical trial examples are presented for illustration. Supplementary materials for this article are available online.
The Transient High-Energy Sky and Early Universe Surveyor (THESEUS)
Creators: name: Amati, Lorenzo
Publisher: name: Zenodo
Year: 2019

description: THESEUS is a space mission concept currently under Phase A study by ESA as candidate M5 mission, aiming at exploiting Gamma-Ray Bursts for investigating the early Universe and at providing a substantial advancement of multi-messenger and time-domain astrophysics. Through an unprecedented combination of X-/gamma-ray monitors, an on-board IR telescope and automated fast slewing capabilities, THESEUS will be a wonderful machine for the detection, characterization and redshift measurement of any kind of GRBs and many classes of X-ray transients. In addition to the full exploitation of high-redshift GRBs for cosmology (pop-III stars, cosmic re-ionization, SFR and metallicity evolution up to the "cosmic dawn"), THESEUS will allow the identification and study of the electromagnetic counterparts to sources of gravitational waves which will be routinely detected in the late '20s / early '30s by next generation facilities like aLIGO/aVirgo, LISA, KAGRA, and Einstein Telescope (ET), as well as of most classes of transient sources, thus providing an ideal synergy with the large e.m. facilities of the near future like LSST, ELT, TMT, SKA, CTA, ATHENA.
Supersymmetry vis-a-vis Muon Colliders
Creators: name: Barger, V.
Publisher: name: arXiv
Year: 1998
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The potential of muon colliders to study a low-energy supersymmetry is addressed in the framework of the minimal supergravity model, whose predictions are first briefly surveyed. Foremost among the unique features of a muon collider is s-channel production of Higgs bosons, by which Higgs boson masses, widths, and couplings can be precisely measured to test the predictions of supersymmetry. Measurements of the threshold region cross sections of W^+ W^-, t t-bar, Zh, chargino pairs, slepton and sneutrino pairs will precisely determine the corresponding masses and test supersymmetric radiative corrections. At the high-energy frontier a 3 to 4 TeV muon collider is ideally suited to study heavy scalar supersymmetric particles.
description: 14 pages, Latex2.09, uses aipproc.sty and espf.sty. 10 postscript figures. Invited talk presented at the Workshop on Physics at the First Muon Collider and at the Front End of a Muon Collider, Fermilab, November 1997. Postscript file of complete paper also available from the UW-Madison Phenomenology preprint archives at ftp://pheno.physics.wisc.edu/pub/preprints/1998/madph-98-1038.ps.Z or
Light scattering from an amplifying medium bounded by a randomly rough surface: A numerical study
Creators: name: Simonsen, Ingve
name: Leskova, Tamara A.
name: Maradudin, Alexei A.
Publisher: name: arXiv
Year: 2000
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: We study by numerical simulations the scattering of $s$-polarized light from a rough dielectric film deposited on the planar surface of a semi-infinite perfect conductor. The dielectric film is allowed to be either active or passive, situations that we model by assigning negative and positive values, respectively, to the imaginary part $ε_2$ of the dielectric constant of the film. We study the reflectance ${\cal R}$ and the total scattered energy ${\cal U}$ for the system as functions of both $ε_2$ and the angle of incidence of the light. Furthermore, the positions and widths of the enhanced backscattering and satellite peaks are discussed. It is found that these peaks become narrower and higher when the amplification of the system is increased, and that their widths scale linearly with $ε_2$. The positions of the backscattering peaks are found to be independent of $ε_2$, while we find a weak dependence on this quantity in the positions of the satellite peaks.
description: Revtex, 9 pages, 9 figures
An Eye for an AI: Evaluating GPT-4o's Visual Perception Skills and Geometric Reasoning Skills Using Computer Graphics Questions
Creators: name: Feng, Tony Haoran
name: Denny, Paul
name: Wünsche, Burkhard C.
name: Luxton-Reilly, Andrew
name: Whalley, Jacqueline
Publisher: name: arXiv
Year: 2024
Subjects: subject: Artificial Intelligence (cs.AI)
subject: Graphics (cs.GR)
subject: FOS: Computer and information sciences
subject: I.2.7; I.3.0; K.3.2

description: CG (Computer Graphics) is a popular field of CS (Computer Science), but many students find this topic difficult due to it requiring a large number of skills, such as mathematics, programming, geometric reasoning, and creativity. Over the past few years, researchers have investigated ways to harness the power of GenAI (Generative Artificial Intelligence) to improve teaching. In CS, much of the research has focused on introductory computing. A recent study evaluating the performance of an LLM (Large Language Model), GPT-4 (text-only), on CG questions, indicated poor performance and reliance on detailed descriptions of image content, which often required considerable insight from the user to return reasonable results. So far, no studies have investigated the abilities of LMMs (Large Multimodal Models), or multimodal LLMs, to solve CG questions and how these abilities can be used to improve teaching.
 In this study, we construct two datasets of CG questions requiring varying degrees of visual perception skills and geometric reasoning skills, and evaluate the current state-of-the-art LMM, GPT-4o, on the two datasets. We find that although GPT-4o exhibits great potential in solving questions with visual information independently, major limitations still exist to the accuracy and quality of the generated results. We propose several novel approaches for CG educators to incorporate GenAI into CG teaching despite these limitations. We hope that our guidelines further encourage learning and engagement in CG classrooms.
description: 8 pages, 8 figures, 1 table, to be published in SIGGRAPH Asia 2024 Educator's Forum
Cooling rate effects in amorphous Silica: A Computer Simulation Study
Creators: name: Vollmayr, Katharina
name: Kob, Walter
name: Binder, Kurt
Publisher: name: arXiv
Year: 1996
Subjects: subject: Condensed Matter (cond-mat)
subject: FOS: Physical sciences

description: Using molecular dynamics computer simulations we investigate how in silica the glass transition and the properties of the resulting glass depend on the cooling rate with which the sample is cooled. By coupling the system to a heat bath with temperature $T_b(t)$, we cool the system linearly in time, $T(t)=T_i-γt$, where $γ$ is the cooling rate. We find that the glass transition temperature $T_g$ is in accordance with a logarithmic dependence on the cooling rate. In qualitative accordance with experiments, the density shows a local maximum, which becomes more pronounced with decreasing cooling rate. The enthalpy, density and the thermal expansion coefficient for the glass at zero temperature decrease with decreasing $γ$. We show that also microscopic quantities, such as the radial distribution function, the bond-bond angle distribution function, the coordination numbers and the distribution function for the size of the rings depend significantly on $γ$. We demonstrate that the cooling rate dependence of these microscopic quantities is significantly more pronounced than the one of macroscopic properties. Furthermore we show that these microscopic quantities, as determined from our simulation, are in good agreement with the ones measured in real experiments, thus demonstrating that the used potential is a good model for silica glass. The vibrational spectrum of the system also shows a significant dependence on the cooling rate and is in qualitative accordance with the one found in experiments. Finally we investigate the properties of the system at finite temperatures in order to understand the microscopic mechanism for the density anomaly. We show that the anomaly is related to a densification and subsequent opening of the tetrahedral network when the temperature is decreased, whereas
description: Figures are available from W. Kob
Diatrypasimilis J. J. Zhou & Kohlm
Creators: name: Dayarathne, Monika C.
name: Wanasinghe, Dhanushka N.
name: Devadatha, B.
name: Abeywickrama, Pranami
name: G, E. B.
name: Jones, areth
name: Chomnunti, Putarak
name: Sarma, V. V.
name: Hyde, Kevin D.
name: Lumyong, Saisamorn
name: C., Eric H.
name: Mckenzie
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Fungi
Ascomycota
Sordariomycetes
Xylariales
Diatrypaceae
Diatrypasimilis

description: Diatrypasimilis J.J.Zhou & Kohlm
 Mycologia 102 (2): 432 (2010).   NOTES
 Diatrypasimilis was proposed by Chalkley et al. (2010) to accommodate a marine xylarialean fungus, Diatrypasimilis australiensis isolated from roots of Rhizophora sp. (mangrove) in Australia. This genus has morphological features similar to both Diatrypaceae and Xylariaceae, such as relatively thick stroma on wood surface, erumpent, subglobose, ostiolate and carbonaceous, black ascomata with a conical neck, hamathecium consisting of paraphyses, 8-spored, cylindrical, unitunicate asci, with an apical apparatus and uniseriate, ellipsoidal, 1-celled, dark brown ascospores with a germ slit (Chalkley et al. 2010; Abdel-Wahab et al. 2014). Molecular phylogenetic analyses of the combined nuclear ribosomal RNA genes and their internal transcribed spacers placed the genus in a basal position in the Diatrypaceae clade of the order Xylariales (Chalkley et al. 2010; Abdel-Wahab et al. 2014). The asexual morph produces synnemata-like structures from yellow-orange to dark brown and distributed irregularly on mycelia developing on an aged culture. It produces hyaline, unicellular, cylindrical, or clavate conidia, which are holoblastic, produced singly on conidiogenous cells (Abdel-Wahab et al. 2014). However, none of the diatrypaceous taxa was sufficiently close to Diatrypasimilis australiensis to allow a clear placement within Diatrypaceae (Abdel-Wahab et al. 2014). Only LSU, SSU and ITS sequence data are available for this species. Therefore, it is necessary to obtain Btub sequence data to confirm whether Diatrypasimilis australiensis is a representative of a new family in the Xylariales or a member of Diatrypaceae.
description: Published as part of Dayarathne, Monika C., Wanasinghe, Dhanushka N., Devadatha, B., Abeywickrama, Pranami, G, E. B., Jones, areth, Chomnunti, Putarak, Sarma, V. V., Hyde, Kevin D., Lumyong, Saisamorn, C., Eric H. & Mckenzie, 2020, Modern taxonomic approaches to identifying diatrypaceous fungi from marine habitats, with a novel genus Halocryptovalsa Dayarathne & K. D. Hyde, gen. nov., pp. 21-67 in Cryptogamie, Mycologie 20 (3) on page 48, DOI: 10.5252/cryptogamie-mycologie2020v41a3, http://zenodo.org/record/7815042
Type II supernova diversity in low-luminosity host galaxies
Creators: name: Gutierrez, Claudia
Publisher: name: Zenodo
Year: 2019

description: Type II Supernovae (SNe II) are produced by the final explosions of massive stars (>8 Msun) that retain a significant part of their hydrogen envelopes before the explosion. These SNe show a large diversity in their transient behaviour, which is likely determined by differences not just in explosion properties but also in progenitor star characteristics. I will present an analysis of a new sample of SNe II occurring within low-luminosity galaxies. This analysis is performed comparing SN II spectral and photometric parameters and estimating the influence of metallicity (inferred from host luminosity differences) on SN II transient properties. In particular, I will present some examples of uncommon SNe II exploding in low-luminosity galaxies and the implications of their behaviour in the determination of the explosion and progenitor parameters.
title: Assessing recent warming using instrumentally homogeneous sea surface temperature records
Creators: name: Hausfather, Zeke
name: Cowtan, Kevin
name: Clarke, David C.
name: Jacobs, Peter H
name: Richardson, Mark
name: Rohde, Robert
Publisher: name: Scientific Advances
Year: 2017

description: Sea surface temperature (SST) records are subject to potential biases due to changing instrumentation and measurement practices. Significant differences exist between commonly used composite SST reconstructions from the National Oceanic and Atmospheric Administration’s Extended Reconstruction Sea Surface Temperature (ERSST), the Hadley Centre SST data set (HadSST3), and the Japanese Meteorological Agency’s Centennial Observation-Based Estimates of SSTs (COBE-SST) from 2003 to the present. The update from ERSST version 3b to version 4 resulted in an increase in the operational SST trend estimate during the last 19 years from 0.07° to 0.12°C per decade, indicating a higher rate of warming in recent years. We show that ERSST version 4 trends generally agree with largely independent, near-global, and instrumentally homogeneous SST measurements from floating buoys, Argo floats, and radiometer-based satellite measurements that have been developed and deployed during the past two decades. We find a large cooling bias in ERSST version 3b and smaller but significant cooling biases in HadSST3 and COBE-SST from 2003 to the present, with respect to most series examined. These results suggest that reported rates of SST warming in recent years have been underestimated in these three data sets.
El Diablo - A TDE with a double-horned disk profile
Creators: name: Short, Phil
Publisher: name: Zenodo
Year: 2019

description: Tidal disruption events occur when the tidal force of a supermassive black hole overcomes an approaching star's self-gravity. A key issue in the TDE field is in determining the power source of observed optical and UV emission, thought to come either from reprocessed disk emission or collisions between stellar debris streams. I will present a new TDE, AT2018hyz, discovered by the ASAS-SN survey at an absolute magnitude ~ -20 mag. Preliminary fits to Swift UVOT photometry suggest temperatures of ~15,000K. High cadence spectra show broad Balmer lines and He I at early times, while He II makes an appearance later on. The Balmer lines evolve from a smooth broad profile, through an asymmetric double-peaked phase and back to smooth at late times. These complex line profiles and a flat Balmer decrement suggest the emission lines originate from a disk chromosphere analogous to those seen in cataclysmic variables. We also observe the possible presence of Bowen fluorescence lines, a feature recently discovered in a subset of 'N-rich' TDEs. I will discuss the physical conditions necessary to account for these features, and the implications of this important event for understanding TDEs.
Dissipative Dynamics of an Open Bose Einstein Condensate
Creators: name: Arecchi, F. T.
name: Bragard, J.
name: Castellano, L. M.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: As an atomic Bose Einstein condensate (BEC) is coupled to a source of uncondensed atoms at the same temperature and to a sink (extraction towards an atom laser) the idealized description in terms of a Gross-Pitaevsky equation (GP) no longer holds. Under suitable physical assumptions we show that the dissipative BEC obeys a Complex Ginzburg Landau equation (CGL) and for some parameter range it undergoes a space time patterning. As a consequence, the density of BEC atoms within the trap displays non trivial space time correlations, which can be detected by monitoring the density profile of the outgoing atom laser. The patterning condition requires a negative scattering length, as e.g. in $^7$Li. In such a case we expect a many domain collapsed regime, rather than a single one as reported for a closed BEC.
description: 13 pages, 5 figures, submitt. to Optics Comm., 18th Aug. 99 (special issue Scully Festschrift)