cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Stoichiometry for entry and binding properties of the Env protein of R5 T cell-tropic HIV-1 and its evolutionary variant of macrophage-tropic HIV-1.
Creators: name: McCue, Amelia
name: Leiderman, Karin
name: Ke, Ruian
name: Nicely, Nathan
name: Moeser, Matthew
name: Sondgeroth, Amy
name: Tripathy, Ashutosh
name: Bonner, Xavier
name: Swanstrom, Ronald
name: Joseph, Sarah B
name: Spielvogel, Ean
Publisher: name: American Society for Microbiology
Year: 2024

description: Human immunodeficiency virus type 1 typically requires a high density of CD4 for efficient entry as a mechanism to target CD4+ T cells (T-tropic), with CCR5 being used most often as the coreceptor. When target T cells are limiting, the virus can evolve to infect cells with a low density of CD4 such as macrophages (M-tropic). The entry phenotype is known to be encoded in the viral Env protein on the surface of the virus particle. Using data showing a dose response for infectivity based on CD4 surface density, we built a model consistent with T-tropic viruses requiring multiple CD4 molecules to mediate infection, whereas M-tropic viruses can infect cells using a single CD4 receptor molecule interaction. We also found that T-tropic viruses bound to the surface of cells with a low density of CD4 are released more slowly than M-tropic viruses which we modeled to be due to multiple interactions of the T-tropic virus with multiple CD4 molecules to allow the initial stable binding. Finally, we found that some M-tropic Env proteins, as the gp120 subunit, possess an enhanced affinity for CD4 compared with their T-tropic pair, indicating that the evolution of macrophage tropism can be reflected both in the closed Env trimer conformation on the virion surface and, in some cases, also in the open confirmation of gp120 Env. Collectively, these studies reveal differences in the stoichiometry of interaction of T-tropic and M-tropic viruses with CD4 and start to identify the basis of binding differences at the biochemical level. IMPORTANCE: Human immunodeficiency virus type 1 normally targets CD4+ T cells for viral replication. When T cells are limiting, the virus can evolve to infect myeloid cells. The evolutionary step involves a change from requiring a high surface density of CD4 for entry to being able to infect cells with a low density of CD4, as is found on myeloid lineage cells such as macrophage and microglia. Viruses able to infect macrophages efficiently are most often found in the CNS late in the disease course, and such viruses may contribute to neurocognitive impairment. Here, we examine the CD4 binding properties of the viral Env protein to explore these two different entry phenotypes.
Phalotris reticulatus
Creators: name: Nogueira, Cristiano C.
name: Argôlo, Antonio J. S.
name: Arzamendia, Vanesa
name: Azevedo, Josué A.
name: Barbo, Fausto E.
name: Bérnils, Renato S.
name: Bolochio, Bruna E.
name: Borges-Martins, Marcio
name: Brasil-Godinho, Marcela
name: Braz, Henrique
name: Buononato, Marcus A.
name: Cisneros-Heredia, Diego F.
name: Colli, Guarino R.
name: Costa, Henrique C.
name: Franco, Francisco L.
name: Giraudo, Alejandro
name: Gonzalez, Rodrigo C.
name: Guedes, Thaís
name: Hoogmoed, Marinus S.
name: Marques, Otavio A. V.
name: Montingelli, Giovanna G.
name: Passos, Paulo
name: Prudente, Ana L. C.
name: Rivas, Gilson A.
name: Sanchez, Paola M.
name: Serrano, Filipe C.
name: Silva Jr., Nelson J.
name: Strüssmann, Christine
name: Vieira-Alencar, João Paulo S.
name: Zaher, Hussam
name: Sawaya, Ricardo J.
name: Martins, Marcio
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Reptilia
Squamata
Colubridae
Phalotris
Phalotris reticulatus

description: Phalotris reticulatus (Peters, 1860)
Type locality. Brazil.
Distribution. Known from Argentina and Brazil (Plt. 271A). Recorded in Araucaria Forest, with marginal records in Atlantic Forest (Plt. 271A), mostly at high elevations (Plt. 271B). Observed in the field in rock outcrop and grassland (Ghizoni-Jr. et al., 2009).
description: Published as part of Nogueira, Cristiano C., Argôlo, Antonio J. S., Arzamendia, Vanesa, Azevedo, Josué A., Barbo, Fausto E., Bérnils, Renato S., Bolochio, Bruna E., Borges-Martins, Marcio, Brasil-Godinho, Marcela, Braz, Henrique, Buononato, Marcus A., Cisneros-Heredia, Diego F., Colli, Guarino R., Costa, Henrique C., Franco, Francisco L., Giraudo, Alejandro, Gonzalez, Rodrigo C., Guedes, Thaís, Hoogmoed, Marinus S., Marques, Otavio A. V., Montingelli, Giovanna G., Passos, Paulo, Prudente, Ana L. C., Rivas, Gilson A., Sanchez, Paola M., Serrano, Filipe C., Silva Jr., Nelson J., Strüssmann, Christine, Vieira-Alencar, João Paulo S., Zaher, Hussam, Sawaya, Ricardo J. & Martins, Marcio, 2019, Atlas of Brazilian Snakes: Verified Point-Locality Maps to Mitigate the Wallacean Shortfall in a Megadiverse Snake Fauna, pp. 1-274 in South American Journal of Herpetology 14 (s 1) on page 33, DOI: 10.2994/SAJH-D-19-00120.1, http://zenodo.org/record/10061686
Dug: a semantic search engine leveraging peer-reviewed knowledge to query biomedical data repositories
Creators: name: Hench, Virginia
name: Bizon, Chris
name: Kebede, Yaphet
name: Crerar, Andrew
name: Braswell, Nathan
name: Boyles, Rebecca
name: Holt, Jonathan R
name: Preiss, Alexander
name: Schreep, Carl
name: Cheadle, John B
name: Bradford, Kira
name: Hiles, Hannah
name: Waldrop, Alexander M
name: Chew, Robert
name: Linebaugh, P J
name: Krishnamurthy, Ashok
name: Ball, Chris M
name: Watson, Matt
name: Cox, Steve
Publisher: name: Oxford University Press (OUP)
Year: 2022

description: MOTIVATION: As the number of public data resources continues to proliferate, identifying relevant datasets across heterogenous repositories is becoming critical to answering scientific questions. To help researchers navigate this data landscape, we developed Dug: a semantic search tool for biomedical datasets utilizing evidence-based relationships from curated knowledge graphs to find relevant datasets and explain why those results are returned. RESULTS: Developed through the National Heart, Lung and Blood Institute's (NHLBI) BioData Catalyst ecosystem, Dug has indexed more than 15 911 study variables from public datasets. On a manually curated search dataset, Dug's total recall (total relevant results/total results) of 0.79 outperformed default Elasticsearch's total recall of 0.76. When using synonyms or related concepts as search queries, Dug (0.36) far outperformed Elasticsearch (0.14) in terms of total recall with no significant loss in the precision of its top results. AVAILABILITY AND IMPLEMENTATION: Dug is freely available at https://github.com/helxplatform/dug. An example Dug deployment is also available for use at https://search.biodatacatalyst.renci.org/. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
BloodGen3 Aggregate A26 Prezi PDF
Creators: name: Chaussabel, Damien
Publisher: name: figshare
Year: 2022
Subjects: subject: 110799 Immunology not elsewhere classified
subject: FOS: Clinical medicine

description: This is a backup for an interactive presentation. For a better viewing experience please access: https://prezi.com/view/9CErpW3NwpN2HgRS3Hzf
ROBOKOP: an abstraction layer and user interface for knowledge graphs to support question answering
Creators: name: Balhoff, James
name: Morton, Kenneth
name: Kebede, Yaphet
name: Fecho, Karamarie
name: Bizon, Chris
name: Cox, Steven
name: Wang, Patrick
name: Tropsha, Alexander
Publisher: name: Oxford University Press (OUP)
Year: 2019

description: SUMMARY: Knowledge graphs (KGs) are quickly becoming a common-place tool for storing relationships between entities from which higher-level reasoning can be conducted. KGs are typically stored in a graph-database format, and graph-database queries can be used to answer questions of interest that have been posed by users such as biomedical researchers. For simple queries, the inclusion of direct connections in the KG and the storage and analysis of query results are straightforward; however, for complex queries, these capabilities become exponentially more challenging with each increase in complexity of the query. For instance, one relatively complex query can yield a KG with hundreds of thousands of query results. Thus, the ability to efficiently query, store, rank and explore sub-graphs of a complex KG represents a major challenge to any effort designed to exploit the use of KGs for applications in biomedical research and other domains. We present Reasoning Over Biomedical Objects linked in Knowledge Oriented Pathways as an abstraction layer and user interface to more easily query KGs and store, rank and explore query results. AVAILABILITY AND IMPLEMENTATION: An instance of the ROBOKOP UI for exploration of the ROBOKOP Knowledge Graph can be found at http://robokop.renci.org. The ROBOKOP Knowledge Graph can be accessed at http://robokopkg.renci.org. Code and instructions for building and deploying ROBOKOP are available under the MIT open software license from https://github.com/NCATS-Gamma/robokop. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
Phalotris tricolor
Creators: name: Nogueira, Cristiano C.
name: Argôlo, Antonio J. S.
name: Arzamendia, Vanesa
name: Azevedo, Josué A.
name: Barbo, Fausto E.
name: Bérnils, Renato S.
name: Bolochio, Bruna E.
name: Borges-Martins, Marcio
name: Brasil-Godinho, Marcela
name: Braz, Henrique
name: Buononato, Marcus A.
name: Cisneros-Heredia, Diego F.
name: Colli, Guarino R.
name: Costa, Henrique C.
name: Franco, Francisco L.
name: Giraudo, Alejandro
name: Gonzalez, Rodrigo C.
name: Guedes, Thaís
name: Hoogmoed, Marinus S.
name: Marques, Otavio A. V.
name: Montingelli, Giovanna G.
name: Passos, Paulo
name: Prudente, Ana L. C.
name: Rivas, Gilson A.
name: Sanchez, Paola M.
name: Serrano, Filipe C.
name: Silva Jr., Nelson J.
name: Strüssmann, Christine
name: Vieira-Alencar, João Paulo S.
name: Zaher, Hussam
name: Sawaya, Ricardo J.
name: Martins, Marcio
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Reptilia
Squamata
Colubridae
Phalotris
Phalotris tricolor

description: Phalotris tricolor (Duméril et al., 1854)
Type locality. Santa Cruz de la Sierra, Santa Cruz, Bolívia.
Distribution. Known from Argentina, Bolivia, Brazil, and Paraguay, mostly along the Chaco (Plt. 272A). In Brazil, known from a restricted area in the Pantanal-Chiquitano Dry Forest contact area, at the Urucum massif, near the Brazil-Bolivia border (Plt. 272A), at low to intermediate elevations (Plt. 272B). Observed in the field in open areas with dry vegetation, shrubland, and wetland (Zilio, 2006; Cabral and Cacciali, 2015).
description: Published as part of Nogueira, Cristiano C., Argôlo, Antonio J. S., Arzamendia, Vanesa, Azevedo, Josué A., Barbo, Fausto E., Bérnils, Renato S., Bolochio, Bruna E., Borges-Martins, Marcio, Brasil-Godinho, Marcela, Braz, Henrique, Buononato, Marcus A., Cisneros-Heredia, Diego F., Colli, Guarino R., Costa, Henrique C., Franco, Francisco L., Giraudo, Alejandro, Gonzalez, Rodrigo C., Guedes, Thaís, Hoogmoed, Marinus S., Marques, Otavio A. V., Montingelli, Giovanna G., Passos, Paulo, Prudente, Ana L. C., Rivas, Gilson A., Sanchez, Paola M., Serrano, Filipe C., Silva Jr., Nelson J., Strüssmann, Christine, Vieira-Alencar, João Paulo S., Zaher, Hussam, Sawaya, Ricardo J. & Martins, Marcio, 2019, Atlas of Brazilian Snakes: Verified Point-Locality Maps to Mitigate the Wallacean Shortfall in a Megadiverse Snake Fauna, pp. 1-274 in South American Journal of Herpetology 14 (s 1) on page 33, DOI: 10.2994/SAJH-D-19-00120.1, http://zenodo.org/record/10061686
Hydrodynastes bicinctus
Creators: name: Nogueira, Cristiano C.
name: Argôlo, Antonio J. S.
name: Arzamendia, Vanesa
name: Azevedo, Josué A.
name: Barbo, Fausto E.
name: Bérnils, Renato S.
name: Bolochio, Bruna E.
name: Borges-Martins, Marcio
name: Brasil-Godinho, Marcela
name: Braz, Henrique
name: Buononato, Marcus A.
name: Cisneros-Heredia, Diego F.
name: Colli, Guarino R.
name: Costa, Henrique C.
name: Franco, Francisco L.
name: Giraudo, Alejandro
name: Gonzalez, Rodrigo C.
name: Guedes, Thaís
name: Hoogmoed, Marinus S.
name: Marques, Otavio A. V.
name: Montingelli, Giovanna G.
name: Passos, Paulo
name: Prudente, Ana L. C.
name: Rivas, Gilson A.
name: Sanchez, Paola M.
name: Serrano, Filipe C.
name: Silva Jr., Nelson J.
name: Strüssmann, Christine
name: Vieira-Alencar, João Paulo S.
name: Zaher, Hussam
name: Sawaya, Ricardo J.
name: Martins, Marcio
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Reptilia
Squamata
Colubridae
Hydrodynastes
Hydrodynastes bicinctus

description: Hydrodynastes bicinctus (Herrmann, 1804)
Type locality. Novo Progresso, state of Pará, Brazil.
Distribution. Known from Brazil,French Guiana, Guyana, and Venezuela (Plt. 273A).In Brazil,recorded in Amazonia, Cerrado, and Atlantic Forest (Plt. 273A) at low to intermediate elevations (Plt. 273B). Observed in the field in rivers and riparian areas (Bernarde and Abe, 2006; Alho, 2008).
description: Published as part of Nogueira, Cristiano C., Argôlo, Antonio J. S., Arzamendia, Vanesa, Azevedo, Josué A., Barbo, Fausto E., Bérnils, Renato S., Bolochio, Bruna E., Borges-Martins, Marcio, Brasil-Godinho, Marcela, Braz, Henrique, Buononato, Marcus A., Cisneros-Heredia, Diego F., Colli, Guarino R., Costa, Henrique C., Franco, Francisco L., Giraudo, Alejandro, Gonzalez, Rodrigo C., Guedes, Thaís, Hoogmoed, Marinus S., Marques, Otavio A. V., Montingelli, Giovanna G., Passos, Paulo, Prudente, Ana L. C., Rivas, Gilson A., Sanchez, Paola M., Serrano, Filipe C., Silva Jr., Nelson J., Strüssmann, Christine, Vieira-Alencar, João Paulo S., Zaher, Hussam, Sawaya, Ricardo J. & Martins, Marcio, 2019, Atlas of Brazilian Snakes: Verified Point-Locality Maps to Mitigate the Wallacean Shortfall in a Megadiverse Snake Fauna, pp. 1-274 in South American Journal of Herpetology 14 (s 1) on page 33, DOI: 10.2994/SAJH-D-19-00120.1, http://zenodo.org/record/10061686
How Applicable Is the Single-Dose AMBITION Regimen for Human Immunodeficiency Virus-Associated Cryptococcal Meningitis to High-Income Settings?
Creators: name: Mosepele, Mosepele
name: Mwandumba, Henry C
name: Meintjes, Graeme
name: Hosseinipour, Mina C
name: Boulware, David R
name: Lawrence, David S
name: Harrison, Thomas S
name: Jarvis, Joseph N
name: Lortholary, Olivier
Publisher: name: Oxford University Press (OUP)
Year: 2022

description: The AmBisome Therapy Induction Optimization (AMBITION-cm) trial, conducted in eastern and southern Africa, showed that a single, high dose (10 mg/kg) of liposomal amphotericin B, given with an oral backbone of fluconazole and flucytosine, was noninferior to the World Health Organization (WHO)-recommended regimen of 7 days of amphotericin B deoxycholate plus flucytosine for treatment of human immunodeficiency virus (HIV)-associated cryptococcal meningitis and has been incorporated into WHO treatment guidelines. We believe that the trial also has important implications for the treatment of HIV-associated cryptococcal meningitis in high-income settings. We advance the arguments, supported by evidence where available, that the AMBITION-cm trial regimen is likely to be as fungicidal as the currently recommended 14-day liposomal amphotericin-based treatments, better tolerated with fewer adverse effects, and confer significant economic and practical benefits and, therefore, should be included as a treatment option in guidance for HIV-associated cryptococcal treatment in high-income settings.
Addition of Flucytosine to Fluconazole for the Treatment of Cryptococcal Meningitis in Africa: A Multicountry Cost-effectiveness Analysis
Creators: name: Shiri, Tinevimbo
name: Mfinanga, Sayoki
name: Jarvis, Joseph N
name: Chanda, Duncan
name: Mwaba, Peter
name: Chen, Tao
name: Lakhi, Shabir
name: Loyse, Angela
name: Heyderman, Robert S
name: Kanyama, Cecilia
name: Lortholary, Olivier
name: Harrison, Thomas S
name: Niessen, Louis W
name: Molloy, Si­le F
name: Hosseinipour, Mina C
name: Jaffar, Shabbar
name: Kivuyo, Sokoine
name: Chan, Adrienne K
name: Temfack, Elvis
name: Mwenge, Lawrence
name: Kouanfack, Charles
Publisher: name: Oxford University Press (OUP)
Year: 2019

description: BACKGROUND: Mortality from cryptococcal meningitis remains very high in Africa. In the Advancing Cryptococcal Meningitis Treatment for Africa (ACTA) trial, 2 weeks of fluconazole (FLU) plus flucytosine (5FC) was as effective and less costly than 2 weeks of amphotericin-based regimens. However, many African settings treat with FLU monotherapy, and the cost-effectiveness of adding 5FC to FLU is uncertain. METHODS: The effectiveness and costs of FLU+5FC were taken from ACTA, which included a costing analysis at the Zambian site. The effectiveness of FLU was derived from cohorts of consecutively enrolled patients, managed in respects other than drug therapy, as were participants in ACTA. FLU costs were derived from costs of FLU+5FC in ACTA, by subtracting 5FC drug and monitoring costs. The cost-effectiveness of FLU+5FC vs FLU alone was measured as the incremental cost-effectiveness ratio (ICER). A probabilistic sensitivity analysis assessed uncertainties and a bivariate deterministic sensitivity analysis examined the impact of varying mortality and 5FC drug costs on the ICER. RESULTS: The mean costs per patient were US $847 (95% confidence interval [CI] $776-927) for FLU+5FC, and US $628 (95% CI $557-709) for FLU. The 10-week mortality rate was 35.1% (95% CI 28.9-41.7%) with FLU+5FC and 53.8% (95% CI 43.1-64.1%) with FLU. At the current 5FC price of US $1.30 per 500 mg tablet, the ICER of 5FC+FLU versus FLU alone was US $65 (95% CI $28-208) per life-year saved. Reducing the 5FC cost to between US $0.80 and US $0.40 per 500 mg resulted in an ICER between US $44 and US $28 per life-year saved. CONCLUSIONS: The addition of 5FC to FLU is cost-effective for cryptococcal meningitis treatment in Africa and, if made available widely, could substantially reduce mortality rates among human immunodeficiency virus-infected persons in Africa.
Hydrodynastes gigas
Creators: name: Nogueira, Cristiano C.
name: Argôlo, Antonio J. S.
name: Arzamendia, Vanesa
name: Azevedo, Josué A.
name: Barbo, Fausto E.
name: Bérnils, Renato S.
name: Bolochio, Bruna E.
name: Borges-Martins, Marcio
name: Brasil-Godinho, Marcela
name: Braz, Henrique
name: Buononato, Marcus A.
name: Cisneros-Heredia, Diego F.
name: Colli, Guarino R.
name: Costa, Henrique C.
name: Franco, Francisco L.
name: Giraudo, Alejandro
name: Gonzalez, Rodrigo C.
name: Guedes, Thaís
name: Hoogmoed, Marinus S.
name: Marques, Otavio A. V.
name: Montingelli, Giovanna G.
name: Passos, Paulo
name: Prudente, Ana L. C.
name: Rivas, Gilson A.
name: Sanchez, Paola M.
name: Serrano, Filipe C.
name: Silva Jr., Nelson J.
name: Strüssmann, Christine
name: Vieira-Alencar, João Paulo S.
name: Zaher, Hussam
name: Sawaya, Ricardo J.
name: Martins, Marcio
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Reptilia
Squamata
Colubridae
Hydrodynastes
Hydrodynastes gigas

description: Hydrodynastes gigas (Duméril et al., 1854)
Type locality. Province of Corrientes, Argentina.
Distribution. Known from Argentina, Bolivia, Brazil, and Paraguay (Plt. 274A). In Brazil, recorded in the Cerrado, Atlantic Forest, Pantanal, Chiquitano Dry Forest and Amazonia (Plt. 274A), mostly at low elevations (Plt. 274B). Observed in the field in wetlands, in gallery forest, and savanna (Santos-Costa, 2003; Bernarde and Abe, 2006).
description: Published as part of Nogueira, Cristiano C., Argôlo, Antonio J. S., Arzamendia, Vanesa, Azevedo, Josué A., Barbo, Fausto E., Bérnils, Renato S., Bolochio, Bruna E., Borges-Martins, Marcio, Brasil-Godinho, Marcela, Braz, Henrique, Buononato, Marcus A., Cisneros-Heredia, Diego F., Colli, Guarino R., Costa, Henrique C., Franco, Francisco L., Giraudo, Alejandro, Gonzalez, Rodrigo C., Guedes, Thaís, Hoogmoed, Marinus S., Marques, Otavio A. V., Montingelli, Giovanna G., Passos, Paulo, Prudente, Ana L. C., Rivas, Gilson A., Sanchez, Paola M., Serrano, Filipe C., Silva Jr., Nelson J., Strüssmann, Christine, Vieira-Alencar, João Paulo S., Zaher, Hussam, Sawaya, Ricardo J. & Martins, Marcio, 2019, Atlas of Brazilian Snakes: Verified Point-Locality Maps to Mitigate the Wallacean Shortfall in a Megadiverse Snake Fauna, pp. 1-274 in South American Journal of Herpetology 14 (s 1) on page 33, DOI: 10.2994/SAJH-D-19-00120.1, http://zenodo.org/record/10061686
Clinical Data: Sources and Types, Regulatory Constraints, Applications
Creators: name: Fecho, Karamarie
name: Ahalt, Stanley C.
name: Glusman, Gustavo
name: Pfaff, Emily R.
name: Robinson, Peter N.
name: The Biomedical Data Translator Consortium
name: Taylor, Casey Overby
name: Hadlock, Jennifer
name: Solbrig, Harold
name: Chute, Christopher G.
name: Tatonetti, Nicholas
name: Weng, Chunhua
name: Ta, Casey
Publisher: name: Wiley
Year: 2019

description: Access to clinical data is critical for the advancement of translational research. However, the numerous regulations and policies that surround the use of clinical data, although critical to ensure patient privacy and protect against misuse, often present challenges to data access and sharing. In this article, we provide an overview of clinical data types and associated regulatory constraints and inferential limitations. We highlight several novel approaches that our team has developed for openly exposing clinical data.
Microorganisms in the Placenta: Links to Early-Life Inflammation and Neurodevelopment in Children.
Creators: name: Tomlinson, Martha Scott
name: Fry, Rebecca C
name: Marsit, Carmen J
name: Stewart, Jill R
name: Lu, Kun
name: O'Shea, T Michael
Publisher: name: American Society for Microbiology
Year: 2019

description: Prenatal exposure to various stressors can influence both early and later life childhood health. Microbial infection of the intrauterine environment, specifically within the placenta, has been associated with deleterious birth outcomes, such as preterm birth, as well as adverse neurological outcomes later in life. The relationships among microorganisms in the placenta, placental function, and fetal development are not well understood. Microorganisms have been associated with perinatal inflammatory responses that have the potential for disrupting fetal brain development. Microbial presence has also been associated with epigenetic modifications in the placenta, as well other tissues. Here we review research detailing the presence of microorganisms in the placenta and associations among such microorganisms, placental DNA methylation, perinatal inflammation, and neurodevelopmental outcomes.
Hydrodynastes melanogigas Franco 2007
Creators: name: Nogueira, Cristiano C.
name: Argôlo, Antonio J. S.
name: Arzamendia, Vanesa
name: Azevedo, Josué A.
name: Barbo, Fausto E.
name: Bérnils, Renato S.
name: Bolochio, Bruna E.
name: Borges-Martins, Marcio
name: Brasil-Godinho, Marcela
name: Braz, Henrique
name: Buononato, Marcus A.
name: Cisneros-Heredia, Diego F.
name: Colli, Guarino R.
name: Costa, Henrique C.
name: Franco, Francisco L.
name: Giraudo, Alejandro
name: Gonzalez, Rodrigo C.
name: Guedes, Thaís
name: Hoogmoed, Marinus S.
name: Marques, Otavio A. V.
name: Montingelli, Giovanna G.
name: Passos, Paulo
name: Prudente, Ana L. C.
name: Rivas, Gilson A.
name: Sanchez, Paola M.
name: Serrano, Filipe C.
name: Silva Jr., Nelson J.
name: Strüssmann, Christine
name: Vieira-Alencar, João Paulo S.
name: Zaher, Hussam
name: Sawaya, Ricardo J.
name: Martins, Marcio
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Reptilia
Squamata
Colubridae
Hydrodynastes
Hydrodynastes melanogigas

description: Hydrodynastes melanogigas Franco et al., 2007
Type locality. Palmas, Tocantins State, Brazil.
Distribution. Endemic to Brazil (Plt. 275A). Restricted to the northern portion of the Cerrado, close to its contact with Amazonia, in the mid Tocantins River drainage (Plt. 275A). All records at low elevations (Plt. 275B). Observed in the field in riparian habitats including wetlands, palm marshes, and gallery forest (Franco et al., 2007).
description: Published as part of Nogueira, Cristiano C., Argôlo, Antonio J. S., Arzamendia, Vanesa, Azevedo, Josué A., Barbo, Fausto E., Bérnils, Renato S., Bolochio, Bruna E., Borges-Martins, Marcio, Brasil-Godinho, Marcela, Braz, Henrique, Buononato, Marcus A., Cisneros-Heredia, Diego F., Colli, Guarino R., Costa, Henrique C., Franco, Francisco L., Giraudo, Alejandro, Gonzalez, Rodrigo C., Guedes, Thaís, Hoogmoed, Marinus S., Marques, Otavio A. V., Montingelli, Giovanna G., Passos, Paulo, Prudente, Ana L. C., Rivas, Gilson A., Sanchez, Paola M., Serrano, Filipe C., Silva Jr., Nelson J., Strüssmann, Christine, Vieira-Alencar, João Paulo S., Zaher, Hussam, Sawaya, Ricardo J. & Martins, Marcio, 2019, Atlas of Brazilian Snakes: Verified Point-Locality Maps to Mitigate the Wallacean Shortfall in a Megadiverse Snake Fauna, pp. 1-274 in South American Journal of Herpetology 14 (s 1) on page 33, DOI: 10.2994/SAJH-D-19-00120.1, http://zenodo.org/record/10061686
Helicops angulatus
Creators: name: Nogueira, Cristiano C.
name: Argôlo, Antonio J. S.
name: Arzamendia, Vanesa
name: Azevedo, Josué A.
name: Barbo, Fausto E.
name: Bérnils, Renato S.
name: Bolochio, Bruna E.
name: Borges-Martins, Marcio
name: Brasil-Godinho, Marcela
name: Braz, Henrique
name: Buononato, Marcus A.
name: Cisneros-Heredia, Diego F.
name: Colli, Guarino R.
name: Costa, Henrique C.
name: Franco, Francisco L.
name: Giraudo, Alejandro
name: Gonzalez, Rodrigo C.
name: Guedes, Thaís
name: Hoogmoed, Marinus S.
name: Marques, Otavio A. V.
name: Montingelli, Giovanna G.
name: Passos, Paulo
name: Prudente, Ana L. C.
name: Rivas, Gilson A.
name: Sanchez, Paola M.
name: Serrano, Filipe C.
name: Silva Jr., Nelson J.
name: Strüssmann, Christine
name: Vieira-Alencar, João Paulo S.
name: Zaher, Hussam
name: Sawaya, Ricardo J.
name: Martins, Marcio
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Reptilia
Squamata
Colubridae
Helicops
Helicops angulatus

description: Helicops angulatus (Linnaeus, 1758)
Type locality. “Asia” (in error).
Distribution. Widespread in the northern portion of South America, occurring in Bolivia, Brazil, Colombia, Ecuador, French Guiana, Guyana, Peru, Suriname, Trinidad, and Venezuela (Plt. 276A). In Brazil, widespread in Amazonia, Chiquitano Dry Forest, Cerrado, Caatinga, and northern portion of the Atlantic Forest (Plt. 276A), mostly at low elevations (Plt. 276B). Observed in the field in streams in forest (Martins and Oliveira, 1998) and savanna (Dal Vechio et al., 2013).
description: Published as part of Nogueira, Cristiano C., Argôlo, Antonio J. S., Arzamendia, Vanesa, Azevedo, Josué A., Barbo, Fausto E., Bérnils, Renato S., Bolochio, Bruna E., Borges-Martins, Marcio, Brasil-Godinho, Marcela, Braz, Henrique, Buononato, Marcus A., Cisneros-Heredia, Diego F., Colli, Guarino R., Costa, Henrique C., Franco, Francisco L., Giraudo, Alejandro, Gonzalez, Rodrigo C., Guedes, Thaís, Hoogmoed, Marinus S., Marques, Otavio A. V., Montingelli, Giovanna G., Passos, Paulo, Prudente, Ana L. C., Rivas, Gilson A., Sanchez, Paola M., Serrano, Filipe C., Silva Jr., Nelson J., Strüssmann, Christine, Vieira-Alencar, João Paulo S., Zaher, Hussam, Sawaya, Ricardo J. & Martins, Marcio, 2019, Atlas of Brazilian Snakes: Verified Point-Locality Maps to Mitigate the Wallacean Shortfall in a Megadiverse Snake Fauna, pp. 1-274 in South American Journal of Herpetology 14 (s 1) on page 33, DOI: 10.2994/SAJH-D-19-00120.1, http://zenodo.org/record/10061686
Application of MCAT questions as a testing tool and evaluation metric for knowledge graph-based reasoning systems
Creators: name: Wawer, Mathias J.
name: Byrd, William E.
name: Fecho, Karamarie
name: Schmitt, Patrick L.
name: Rensi, Stefano E.
name: Bizon, Chris
name: Ahalt, Stanley C.
name: Koslicki, David
name: Williams, Mark
name: Hang, Sui
name: Balhoff, James
Publisher: name: Wiley
Year: 2021

description: "Knowledge graphs" (KGs) have become a common approach for representing biomedical knowledge. In a KG, multiple biomedical data sets can be linked together as a graph representation, with nodes representing entities, such as "chemical substance" or "genes," and edges representing predicates, such as "causes" or "treats." Reasoning and inference algorithms can then be applied to the KG and used to generate new knowledge. We developed three KG-based question-answering systems as part of the Biomedical Data Translator program. These systems are typically tested and evaluated using traditional software engineering tools and approaches. In this study, we explored a team-based approach to test and evaluate the prototype "Translator Reasoners" through the application of Medical College Admission Test (MCAT) questions. Specifically, we describe three "hackathons," in which the developers of each of the three systems worked together with a moderator to determine whether the applications could be used to solve MCAT questions. The results demonstrate progressive improvement in system performance, with 0% (0/5) correct answers during the first hackathon, 75% (3/4) correct during the second hackathon, and 100% (5/5) correct during the final hackathon. We discuss the technical and sociologic lessons learned and conclude that MCAT questions can be applied successfully in the context of moderated hackathons to test and evaluate prototype KG-based question-answering systems, identify gaps in current capabilities, and improve performance. Finally, we highlight several published clinical and translational science applications of the Translator Reasoners.
Helicops apiaka Kawashita-Ribeiro 2013
Creators: name: Nogueira, Cristiano C.
name: Argôlo, Antonio J. S.
name: Arzamendia, Vanesa
name: Azevedo, Josué A.
name: Barbo, Fausto E.
name: Bérnils, Renato S.
name: Bolochio, Bruna E.
name: Borges-Martins, Marcio
name: Brasil-Godinho, Marcela
name: Braz, Henrique
name: Buononato, Marcus A.
name: Cisneros-Heredia, Diego F.
name: Colli, Guarino R.
name: Costa, Henrique C.
name: Franco, Francisco L.
name: Giraudo, Alejandro
name: Gonzalez, Rodrigo C.
name: Guedes, Thaís
name: Hoogmoed, Marinus S.
name: Marques, Otavio A. V.
name: Montingelli, Giovanna G.
name: Passos, Paulo
name: Prudente, Ana L. C.
name: Rivas, Gilson A.
name: Sanchez, Paola M.
name: Serrano, Filipe C.
name: Silva Jr., Nelson J.
name: Strüssmann, Christine
name: Vieira-Alencar, João Paulo S.
name: Zaher, Hussam
name: Sawaya, Ricardo J.
name: Martins, Marcio
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Reptilia
Squamata
Colubridae
Helicops
Helicops apiaka

description: Helicops apiaka Kawashita-Ribeiro et al., 2013
Type locality. Rio Teles Pires, Paranaíta, state of Mato Grosso, Brazil.
Distribution. Endemic to Brazil (Plt. 277A). Restricted to southeastern Amazonia (Plt. 277A) at low elevations (Plt. 277B). Observed in the field in streams and rivers in forest (Kawashita-Ribeiro et al., 2013).
description: Published as part of Nogueira, Cristiano C., Argôlo, Antonio J. S., Arzamendia, Vanesa, Azevedo, Josué A., Barbo, Fausto E., Bérnils, Renato S., Bolochio, Bruna E., Borges-Martins, Marcio, Brasil-Godinho, Marcela, Braz, Henrique, Buononato, Marcus A., Cisneros-Heredia, Diego F., Colli, Guarino R., Costa, Henrique C., Franco, Francisco L., Giraudo, Alejandro, Gonzalez, Rodrigo C., Guedes, Thaís, Hoogmoed, Marinus S., Marques, Otavio A. V., Montingelli, Giovanna G., Passos, Paulo, Prudente, Ana L. C., Rivas, Gilson A., Sanchez, Paola M., Serrano, Filipe C., Silva Jr., Nelson J., Strüssmann, Christine, Vieira-Alencar, João Paulo S., Zaher, Hussam, Sawaya, Ricardo J. & Martins, Marcio, 2019, Atlas of Brazilian Snakes: Verified Point-Locality Maps to Mitigate the Wallacean Shortfall in a Megadiverse Snake Fauna, pp. 1-274 in South American Journal of Herpetology 14 (s 1) on page 33, DOI: 10.2994/SAJH-D-19-00120.1, http://zenodo.org/record/10061686
Özgeçmişim, Başarılarım ve Çalışmalarım
Creators: name: Keçeli, Selim
Publisher: name: Zenodo
Year: 2018

description: Bu belge, kişisel özgeçmişim, başarılarım ve çalışmalarım hakkında detaylı bilgiler içermektedir. Akademik ve profesyonel geçmişime ilişkin bilgilerin yanı sıra, katıldığım projeler, elde ettiğim başarılar ve sunduğum hizmetler hakkında detaylı bilgilere yer verilmiştir. Özgeçmişin oluşturulmasında Open Ai'nin yapay zeka teknolojilerinden Chat GPT yapay zeka teknolojisinden yararlanılmıştır. Redaksiyon Selim Keçeli tarafından yapıldı.
Receipt of Diabetes Specialty Care and Management Services by Older Adults With Diabetes in the United States, 2015-2019: An Analysis of Medicare Fee-for-Service Claims.
Creators: name: Jonsson Funk, Michele
name: Busby-Whitehead, Jan
name: Weinstock, Ruth S
name: Pratley, Richard E
name: Weinstein, Joshua M
name: Young, Laura A
name: Kahkoska, Anna R
Publisher: name: American Diabetes Association
Year: 2024

description: OBJECTIVE: We characterized the receipt of diabetes specialty care and management services among older adults with diabetes. RESEARCH DESIGN AND METHODS: Using a 20% random sample of fee-for-service Medicare beneficiaries aged â‰¥65 years, we analyzed cohorts of type 1 diabetes (T1D) or type 2 diabetes (T2D) with history of severe hypoglycemia (HoH), and all other T2D annually from 2015 to 2019. Outcomes were receipt of office-based endocrinology care, diabetes education, outpatient diabetes health services, excluding those provided in primary care, and any of the aforementioned services. RESULTS: In the T1D cohort, receipt of endocrinology care and any service increased from 25.9% and 29.2% in 2015 to 32.7% and 37.4% in 2019, respectively. In the T2D with HoH cohort, receipt of endocrinology care and any service was 13.9% and 16.4% in 2015, with minimal increases. Age, race/ethnicity, residential setting, and income were associated with receiving care. CONCLUSIONS: These findings suggest that many older adults may not receive specialty diabetes care and underscore health disparities.
Nutritional Status, Dietary Intake, and Nutrition-Related Interventions Among Older Adults With Type 1 Diabetes: A Systematic Review and Call for More Evidence Toward Clinical Guidelines.
Creators: name: Mayer-Davis, Elizabeth J
name: Fruik, Angela
name: Cristello Sarteau, Angelica
name: Kahkoska, Anna R
name: Muthukkumar, Rashmi
name: Ercolino, Gabriella
Publisher: name: American Diabetes Association
Year: 2024

description: There is an emerging population of older adults (â‰¥65 years) living with type 1 diabetes. Optimizing health through nutrition during this life stage is challenged by multiple and ongoing changes in diabetes management, comorbidities, and lifestyle factors. There is a need to understand nutritional status, dietary intake, and nutrition-related interventions that may maximize well-being throughout the life span in type 1 diabetes, in addition to nutrition recommendations from clinical guidelines and consensus reports. Three reviewers used Cochrane guidelines to screen original research (January 1993-2023) and guidelines (2012-2023) in two databases (MEDLINE and CENTRAL) to characterize nutrition evidence in this population. We found limited original research explicitly focused on nutrition and diet in adults â‰¥65 years of age with type 1 diabetes (six experimental studies, five observational studies) and meta-analyses/reviews (one scoping review), since in the majority of analyses individuals â‰¥65 years of age were combined with those age â‰¥18 years, with diverse diabetes durations, and also individuals with type 1 and type 2 diabetes were combined. Further, existing clinical guidelines (n = 10) lacked specificity and evidence to guide clinical practice and self-management behaviors in this population. From a scientific perspective, little is known about nutrition and diet among older adults with type 1 diabetes, including baseline nutrition status, dietary intake and eating behaviors, and the impact of nutrition interventions on key clinical and patient-oriented outcomes. This likely reflects the population's recent emergence and unique considerations. Addressing these gaps is foundational to developing evidence-based nutrition practices and guidelines for older adults living with type 1 diabetes.
Helicops boitata Moraes-Da-Silva, Cecilia Amaro, Sales-Nunes, Strussmann, Teixeira, Andrade, Sudre, Recoder, Rodrigues, Curcio 2019
Creators: name: Nogueira, Cristiano C.
name: Argôlo, Antonio J. S.
name: Arzamendia, Vanesa
name: Azevedo, Josué A.
name: Barbo, Fausto E.
name: Bérnils, Renato S.
name: Bolochio, Bruna E.
name: Borges-Martins, Marcio
name: Brasil-Godinho, Marcela
name: Braz, Henrique
name: Buononato, Marcus A.
name: Cisneros-Heredia, Diego F.
name: Colli, Guarino R.
name: Costa, Henrique C.
name: Franco, Francisco L.
name: Giraudo, Alejandro
name: Gonzalez, Rodrigo C.
name: Guedes, Thaís
name: Hoogmoed, Marinus S.
name: Marques, Otavio A. V.
name: Montingelli, Giovanna G.
name: Passos, Paulo
name: Prudente, Ana L. C.
name: Rivas, Gilson A.
name: Sanchez, Paola M.
name: Serrano, Filipe C.
name: Silva Jr., Nelson J.
name: Strüssmann, Christine
name: Vieira-Alencar, João Paulo S.
name: Zaher, Hussam
name: Sawaya, Ricardo J.
name: Martins, Marcio
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Reptilia
Squamata
Colubridae
Helicops
Helicops boitata

description: Helicops boitata Moraes-da-Silva et al., 2019
Type locality. Transpantaneira road, Poconé, state of Mato Grosso, Brazil.
Distribution. Endemic to Brazil (Plt. 278A). Known from a single record in northern Pantanal (Plt. 278A) at a low elevation (Plt. 278B). Observed in the field in seasonally flooded open areas (Moraes-da-Silva et al., 2019).
description: Published as part of Nogueira, Cristiano C., Argôlo, Antonio J. S., Arzamendia, Vanesa, Azevedo, Josué A., Barbo, Fausto E., Bérnils, Renato S., Bolochio, Bruna E., Borges-Martins, Marcio, Brasil-Godinho, Marcela, Braz, Henrique, Buononato, Marcus A., Cisneros-Heredia, Diego F., Colli, Guarino R., Costa, Henrique C., Franco, Francisco L., Giraudo, Alejandro, Gonzalez, Rodrigo C., Guedes, Thaís, Hoogmoed, Marinus S., Marques, Otavio A. V., Montingelli, Giovanna G., Passos, Paulo, Prudente, Ana L. C., Rivas, Gilson A., Sanchez, Paola M., Serrano, Filipe C., Silva Jr., Nelson J., Strüssmann, Christine, Vieira-Alencar, João Paulo S., Zaher, Hussam, Sawaya, Ricardo J. & Martins, Marcio, 2019, Atlas of Brazilian Snakes: Verified Point-Locality Maps to Mitigate the Wallacean Shortfall in a Megadiverse Snake Fauna, pp. 1-274 in South American Journal of Herpetology 14 (s 1) on page 33, DOI: 10.2994/SAJH-D-19-00120.1, http://zenodo.org/record/10061686
Γ-limits and relaxations for rate-independent evolutionary problems
Creators: name: Mielke, Alexander
name: Roubíček, Tomáš
name: Stefanelli, Ulisse
Publisher: name: Weierstrass Institute
Year: 2006
Subjects: subject: Rate-independent problems
subject: energetic formulation
subject: Gamma convergence
subject: relaxation
subject: time-incremental minimization
subject: joint recovery sequence
subject: 49J40
subject: 49S05
subject: 35K90

description: This work uses the energetic formulation of rate-independent systems that is based on the stored-energy functionals ε and the dissipation distance D. For sequences (ε k)k ∈ ℕ and (D k)k ∈ ℕ we address the question under which conditions the limits q∞ of solutions qk: [0,T] → Q satisfy a suitable limit problem with limit functionals ε∞ and D∞, which are the corresponding Γ-limits. We derive a sufficient condition, called emphconditional upper semi-continuity of the stable sets, which is essential to guarantee that q∞ solves the limit problem. In particular, this condition holds if certain emphjoint recovery sequences exist. Moreover, we show that time-incremental minimization problems can be used to approximate the solutions. A first example involves the numerical approximation of functionals using finite-element spaces. A second example shows that the stop and the play operator convergece if the yield sets converge in the sense of Mosco. The third example deals with a problem developing microstructure in the limit k → ∞, which in the limit can be described by an effective macroscopic model.
Helicops carinicaudus
Creators: name: Nogueira, Cristiano C.
name: Argôlo, Antonio J. S.
name: Arzamendia, Vanesa
name: Azevedo, Josué A.
name: Barbo, Fausto E.
name: Bérnils, Renato S.
name: Bolochio, Bruna E.
name: Borges-Martins, Marcio
name: Brasil-Godinho, Marcela
name: Braz, Henrique
name: Buononato, Marcus A.
name: Cisneros-Heredia, Diego F.
name: Colli, Guarino R.
name: Costa, Henrique C.
name: Franco, Francisco L.
name: Giraudo, Alejandro
name: Gonzalez, Rodrigo C.
name: Guedes, Thaís
name: Hoogmoed, Marinus S.
name: Marques, Otavio A. V.
name: Montingelli, Giovanna G.
name: Passos, Paulo
name: Prudente, Ana L. C.
name: Rivas, Gilson A.
name: Sanchez, Paola M.
name: Serrano, Filipe C.
name: Silva Jr., Nelson J.
name: Strüssmann, Christine
name: Vieira-Alencar, João Paulo S.
name: Zaher, Hussam
name: Sawaya, Ricardo J.
name: Martins, Marcio
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Reptilia
Squamata
Colubridae
Helicops
Helicops carinicaudus

description: Helicops carinicaudus (Wied, 1825)
Type locality. Rio Itapemirim, state of Espírito Santo, Brazil.
Distribution. Endemic to Brazil (Plt. 279A). Restricted to coastal Atlantic Forest (Plt. 279A) at low elevations (Plt. 279B). Observed in the field in preserved or disturbed water bodies, including urban areas (Dixon and Soini, 1977; Hartmann et al., 2009; Pontes et al., 2009).
description: Published as part of Nogueira, Cristiano C., Argôlo, Antonio J. S., Arzamendia, Vanesa, Azevedo, Josué A., Barbo, Fausto E., Bérnils, Renato S., Bolochio, Bruna E., Borges-Martins, Marcio, Brasil-Godinho, Marcela, Braz, Henrique, Buononato, Marcus A., Cisneros-Heredia, Diego F., Colli, Guarino R., Costa, Henrique C., Franco, Francisco L., Giraudo, Alejandro, Gonzalez, Rodrigo C., Guedes, Thaís, Hoogmoed, Marinus S., Marques, Otavio A. V., Montingelli, Giovanna G., Passos, Paulo, Prudente, Ana L. C., Rivas, Gilson A., Sanchez, Paola M., Serrano, Filipe C., Silva Jr., Nelson J., Strüssmann, Christine, Vieira-Alencar, João Paulo S., Zaher, Hussam, Sawaya, Ricardo J. & Martins, Marcio, 2019, Atlas of Brazilian Snakes: Verified Point-Locality Maps to Mitigate the Wallacean Shortfall in a Megadiverse Snake Fauna, pp. 1-274 in South American Journal of Herpetology 14 (s 1) on page 34, DOI: 10.2994/SAJH-D-19-00120.1, http://zenodo.org/record/10061686
Quantitative classification of chromatin dynamics reveals regulators of intestinal stem cell differentiation
Creators: name: Raab, Jesse R.
name: Gracz, Adam D.
name: Tulasi, Deepthi Y.
name: Wager, Kortney E.
name: Morowitz, Jeremy M.
name: Magness, Scott T.
Publisher: name: The Company of Biologists
Year: 2020

description: Intestinal stem cell (ISC) plasticity is thought to be regulated by broadly permissive chromatin shared between ISCs and their progeny. Here, we have used a Sox9EGFP reporter to examine chromatin across ISC differentiation. We find that open chromatin regions (OCRs) can be defined as broadly permissive or dynamic in a locus-specific manner, with dynamic OCRs found primarily in loci consistent with distal enhancers. By integrating gene expression with chromatin accessibility at transcription factor (TF) motifs in the context of Sox9EGFP populations, we classify broadly permissive and dynamic chromatin relative to TF usage. These analyses identify known and potential regulators of ISC differentiation via association with dynamic changes in chromatin. Consistent with computational predictions, Id3-null mice exhibit increased numbers of cells expressing the ISC-specific biomarker OLFM4. Finally, we examine the relationship between gene expression and 5-hydroxymethylcytosine (5hmC) in Sox9EGFP populations, which reveals 5hmC enrichment in absorptive lineage-specific genes. Our data demonstrate that intestinal chromatin dynamics can be quantitatively defined in a locus-specific manner, identify novel potential regulators of ISC differentiation and provide a chromatin roadmap for further dissecting cis regulation of cell fate in the intestine.
Helicops gomesi Amaral 1922
Creators: name: Nogueira, Cristiano C.
name: Argôlo, Antonio J. S.
name: Arzamendia, Vanesa
name: Azevedo, Josué A.
name: Barbo, Fausto E.
name: Bérnils, Renato S.
name: Bolochio, Bruna E.
name: Borges-Martins, Marcio
name: Brasil-Godinho, Marcela
name: Braz, Henrique
name: Buononato, Marcus A.
name: Cisneros-Heredia, Diego F.
name: Colli, Guarino R.
name: Costa, Henrique C.
name: Franco, Francisco L.
name: Giraudo, Alejandro
name: Gonzalez, Rodrigo C.
name: Guedes, Thaís
name: Hoogmoed, Marinus S.
name: Marques, Otavio A. V.
name: Montingelli, Giovanna G.
name: Passos, Paulo
name: Prudente, Ana L. C.
name: Rivas, Gilson A.
name: Sanchez, Paola M.
name: Serrano, Filipe C.
name: Silva Jr., Nelson J.
name: Strüssmann, Christine
name: Vieira-Alencar, João Paulo S.
name: Zaher, Hussam
name: Sawaya, Ricardo J.
name: Martins, Marcio
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Reptilia
Squamata
Colubridae
Helicops
Helicops gomesi

description: Helicops gomesi Amaral, 1922
Type locality. EstaÇão Costa Pinto, Piracicaba, state of São Paulo, Brazil.
Distribution. Endemic to Brazil (Plt. 280A) recorded only in the southern portion of the Cerrado and its contact areas with Atlantic Forest (Plt. 280A) at intermediate to high elevations of the upper Paraná basin (Plt. 280B). Observed in the field in wet grassland and palm marshes (Valdujo et al., 2009).
description: Published as part of Nogueira, Cristiano C., Argôlo, Antonio J. S., Arzamendia, Vanesa, Azevedo, Josué A., Barbo, Fausto E., Bérnils, Renato S., Bolochio, Bruna E., Borges-Martins, Marcio, Brasil-Godinho, Marcela, Braz, Henrique, Buononato, Marcus A., Cisneros-Heredia, Diego F., Colli, Guarino R., Costa, Henrique C., Franco, Francisco L., Giraudo, Alejandro, Gonzalez, Rodrigo C., Guedes, Thaís, Hoogmoed, Marinus S., Marques, Otavio A. V., Montingelli, Giovanna G., Passos, Paulo, Prudente, Ana L. C., Rivas, Gilson A., Sanchez, Paola M., Serrano, Filipe C., Silva Jr., Nelson J., Strüssmann, Christine, Vieira-Alencar, João Paulo S., Zaher, Hussam, Sawaya, Ricardo J. & Martins, Marcio, 2019, Atlas of Brazilian Snakes: Verified Point-Locality Maps to Mitigate the Wallacean Shortfall in a Megadiverse Snake Fauna, pp. 1-274 in South American Journal of Herpetology 14 (s 1) on page 34, DOI: 10.2994/SAJH-D-19-00120.1, http://zenodo.org/record/10061686