cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
A Realistic Coaxial Feed for Cascaded Cylindrical Metasurfaces
Creators: name: Lin, Chun-Wen
name: Grbic, Anthony
Publisher: name: arXiv
Year: 2023
Subjects: subject: Applied Physics (physics.app-ph)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: In this letter, a realistic coaxial feed is integrated into the design of cascaded cylindrical metasurfaces. This is in contrast to the fictitious current source that is often reported in literature. The S-matrix of the coaxial feed is obtained by way of the mode-matching technique, which is subsequently combined with the S-matrix of the cascaded cylindrical metasurfaces to account for the interaction between the feed and metasurfaces. The integration of a realistic feed into the design process enables practical cylindrical-metasurface-based devices.
description: 5 pages, 4 figures. This work has been submitted to the IEEE for possible publication
A New Wave in Robotics: Survey on Recent mmWave Radar Applications in Robotics
Creators: name: Harlow, Kyle
name: Jang, Hyesu
name: Barfoot, Timothy D.
name: Kim, Ayoung
name: Heckman, Christoffer
Publisher: name: arXiv
Year: 2023
Subjects: subject: Robotics (cs.RO)
subject: FOS: Computer and information sciences
subject: I.2.9

description: We survey the current state of millimeterwave (mmWave) radar applications in robotics with a focus on unique capabilities, and discuss future opportunities based on the state of the art. Frequency Modulated Continuous Wave (FMCW) mmWave radars operating in the 76--81GHz range are an appealing alternative to lidars, cameras and other sensors operating in the near visual spectrum. Radar has been made more widely available in new packaging classes, more convenient for robotics and its longer wavelengths have the ability to bypass visual clutter such as fog, dust, and smoke. We begin by covering radar principles as they relate to robotics. We then review the relevant new research across a broad spectrum of robotics applications beginning with motion estimation, localization, and mapping. We then cover object detection and classification, and then close with an analysis of current datasets and calibration techniques that provide entry points into radar research.
description: 20 Pages, 7 Figures, 2 Tables, TRO Submission pending
Additional file 3 of Non-vitamin K antagonist oral anticoagulants in venous thromboembolism patients: a meta-analysis of real-world studies
Creators: name: Liu, Zhi-Yan
name: Zhang, Han-Xu
name: Ma, Ling-Yue
name: Mu, Guang-Yan
name: Xie, Qiu-Fen
name: Zhou, Shuang
name: Wang, Zi-Ning
name: Wang, Zhe
name: Hu, Kun
name: Xiang, Qian
name: Cui, Yi-Min
Publisher: name: figshare
Year: 2022
Subjects: Medicine
Biotechnology
Cancer
Science Policy
Mental Health

description: Additional file 3. Table S2. Baseline comparison between different two groups.
title: Depositional Model for the Auriferous Gravels in the Payan Mining District Department of Narino, Columbia, South America
Creators: name: Garrett, Jim R.
Publisher: name: Old Dominion University
publisherIdentifier: https://ror.org/04zjtrb98
publisherIdentifierScheme: ROR
Year: 1985

description: Unlike placer deposits in arid and semi-arid environments where gold concentration is closely tied to the position of the bedrock, Payan placer deposits have no association with bedrock. Gold concentration values show highest gold concentrations occur at the contact of a coarse sand unit and its underlying gravel unit. Comparisons of the size and shape distributions of gold grain populations with their associated black sand populations indicate the gold and black sand were not deposited in hydraulic equilibrium. The mean size of each gold population is consistently coarser than the mean size of its associated black sand population despite the large density difference. Flood events and subsequent entrainment sorting occurring during waning flow conditions can account for the observed areas of highest gold concentration as well as the anomalous size relationship between gold grain populations and their associated black sand populations. Morphological characteristics of gold grains observed under SEM establish that two types of gold exist in the Payan Mining District. One type probably travelled a distance of 80 to 100 km from its source, while the other type probably travelled less than 25 km from its source.
Juniperus phylogeny from chloroplast genomes
Creators: name: Balkenbush, Therese
Publisher: name: figshare
Year: 2017
Subjects: subject: 60310 Plant Systematics and Taxonomy
subject: FOS: Biological sciences
subject: 60309 Phylogeny and Comparative Analysis
subject: Plant Biology
subject: 60408 Genomics

description: An evaluation of current Juniperus topologies using an enlarged dataset (complete chloroplast). Also an investigation into the most variable regions of the chloroplast genome in Juniperus in comparison to commonly used regions in phylogenetics.
Deep Unsupervised Learning for 3D ALS Point Cloud Change Detection
Creators: name: de Gélis, Iris
name: Saha, Sudipan
name: Shahzad, Muhammad
name: Corpetti, Thomas
name: Lefèvre, Sébastien
name: Zhu, Xiao Xiang
Publisher: name: arXiv
Year: 2023
Subjects: subject: Image and Video Processing (eess.IV)
subject: FOS: Electrical engineering, electronic engineering, information engineering

description: Change detection from traditional \added{2D} optical images has limited capability to model the changes in the height or shape of objects. Change detection using 3D point cloud \added{from photogrammetry or LiDAR surveying} can fill this gap by providing critical depth information. While most existing machine learning based 3D point cloud change detection methods are supervised, they severely depend on the availability of annotated training data, which is in practice a critical point. To circumnavigate this dependence, we propose an unsupervised 3D point cloud change detection method mainly based on self-supervised learning using deep clustering and contrastive learning. The proposed method also relies on an adaptation of deep change vector analysis to 3D point cloud via nearest point comparison. Experiments conducted on \added{an aerial LiDAR survey dataset} show that the proposed method obtains higher performance in comparison to the traditional unsupervised methods, with a gain of about 9\% in mean accuracy (to reach more than 85\%). Thus, it appears to be a relevant choice in scenario where prior knowledge (labels) is not ensured.
description: This work has been accepted to Elsevier for publication
Fatigue Crack Growth & Aircraft Sustainment
Creators: name: PU HUANG
Publisher: name: Monash University
Year: 2017
Subjects: subject: Aerospace Engineering
subject: FOS: Mechanical engineering

description: This thesis focuses on the growth of small cracks which dominates the fatigue life of an operational aircraft. A systematic study into small cracks were presented, including validation of the stress intensity factors associated with small cracks, using different approaches to capture crack growth histories, investigation of the interaction of multiple cracks and variability in the crack growth rates.
Energy-Latency Aware Intelligent Reflecting Surface Aided Multi-cell Mobile Edge Computing
Creators: name: Xu, Wenhan
name: Yu, Jiadong
name: Wu, Yuan
name: Tsang, Danny H. K.
Publisher: name: arXiv
Year: 2023
Subjects: subject: Networking and Internet Architecture (cs.NI)
subject: FOS: Computer and information sciences

description: The explosive development of the Internet of Things (IoT) has led to increased interest in mobile edge computing (MEC), which provides computational resources at network edges to accommodate computation-intensive and latency-sensitive applications. Intelligent reflecting surfaces (IRSs) have gained attention as a solution to overcome blockage problems during the offloading uplink transmission in MEC systems. This paper explores IRS-aided multi-cell networks that enable servers to serve neighboring cells and cooperate to handle resource exhaustion. We aim to minimize the joint energy and latency cost, by jointly optimizing computation tasks, edge computing resources, user beamforming, and IRS phase shifts. The problem is decomposed into two subproblems--the MEC subproblem and the IRS communication subproblem--using the block coordinate descent (BCD) technique. The MEC subproblem is reformulated as a nonconvex quadratic constrained problem (QCP), while the IRS communication subproblem is transformed into a weight-sum-rate problem with auxiliary variables. We propose an efficient algorithm to iteratively optimize MEC resources and IRS communication until convergence. Numerical results show that our algorithm outperforms benchmarks and that multi-cell MEC systems achieve additional performance gains when supported by IRS.
description: This work has been submitted to the IEEE for possible publication
title: ADCO, Septième cartulaire de Saint-Étienne de Dijon (1661-1665), Cart. 29 (G 134), 996 folios, f. 0270
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: cartulaire

description: Septième cartulaire de Saint-Étienne de Dijon (1661-1665), Archives départementales de la Côte-d'Or, Cart. 29 (G 134), 996 folios, f. 0270, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Septième cartulaire de Saint-Étienne de Dijon (1661-1665), Archives départementales de la Côte-d'Or, Cart. 29 (G 134), 996 folios, f. 0270, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https://manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
Survey of simulation use in CSD university programs (Dudding & Nottingham, 2017)
Creators: name: Dudding, Carol C.
name: Nottingham, Elizabeth E.
Publisher: name: ASHA journals
Year: 2017
Subjects: subject: 170204 Linguistic Processes (incl. Speech Production and Comprehension)
subject: FOS: Psychology
subject: 130103 Higher Education
subject: FOS: Educational sciences

description: Purpose: This study provides a framework for understanding the range and diversity of simulation use, along with the benefits and challenges to the growth of simulation in university programs in communication sciences and disorders (CSD) across the United States.Method: A web-based questionnaire was developed and deployed to educators in undergraduate and graduate speech-language pathology and audiology programs in the American Speech-Language-Hearing Association EdFind database (N = 309). Responses from 44% (n = 136) of the American Speech-Language-Hearing Association–accredited CSD programs were analyzed.Results: Overall, 51% (n = 69) of respondents reported using simulations in clinical education. Of the 5 categories of health care simulation, programs most often employed standardized patients and/or computer-based simulations. Barriers to using simulations included a lack of knowledge, limited financial resources, undertrained faculty, and little guidance from accrediting bodies. A significant number of respondents (n = 66) agreed with the statement that simulated experiences could account for up to 25% of required direct clinical hours in speech-language pathology and audiology.Conclusions: Results of this study suggest an emerging acceptance of simulations as a method of augmenting clinical education within CSD programs. Expanding educational efforts and increasing opportunities for faculty training are essential in realizing the full potential of future professionals using simulations in CSD.
Supplemental Material S1. Full questionnaire.
Dudding, C. C., & Nottingham, E. E. (2017). A national survey of simulation use in university programs in communication sciences and disorders. American Journal of Speech-Language Pathology, 27, 71–81. https://doi.org/10.1044/2017_AJSLP-17-0015
DC3DCD: unsupervised learning for multiclass 3D point cloud change detection
Creators: name: de Gélis, Iris
name: Lefèvre, Sébastien
name: Corpetti, Thomas
Publisher: name: arXiv
Year: 2023
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Artificial Intelligence (cs.AI)
subject: FOS: Computer and information sciences

description: In a constant evolving world, change detection is of prime importance to keep updated maps. To better sense areas with complex geometry (urban areas in particular), considering 3D data appears to be an interesting alternative to classical 2D images. In this context, 3D point clouds (PCs), whether obtained through LiDAR or photogrammetric techniques, provide valuable information. While recent studies showed the considerable benefit of using deep learning-based methods to detect and characterize changes into raw 3D PCs, these studies rely on large annotated training data to obtain accurate results. The collection of these annotations are tricky and time-consuming. The availability of unsupervised or weakly supervised approaches is then of prime interest. In this paper, we propose an unsupervised method, called DeepCluster 3D Change Detection (DC3DCD), to detect and categorize multiclass changes at point level. We classify our approach in the unsupervised family given the fact that we extract in a completely unsupervised way a number of clusters associated with potential changes. Let us precise that in the end of the process, the user has only to assign a label to each of these clusters to derive the final change map. Our method builds upon the DeepCluster approach, originally designed for image classification, to handle complex raw 3D PCs and perform change segmentation task. An assessment of the method on both simulated and real public dataset is provided. The proposed method allows to outperform fully-supervised traditional machine learning algorithm and to be competitive with fully-supervised deep learning networks applied on rasterization of 3D PCs with a mean of IoU over classes of change of 57.06\% and 66.69\% for the simulated and the real datasets, respectively.
description: This work has been accepted to Elsevier for publication
¿Te crees un buen jefe? Entonces, ¿no cometes estos errores?
Creators: name: Alba, Jorge
Publisher: name: figshare
Year: 2017
Subjects: subject: 150304 Entrepreneurship
subject: FOS: Economics and business
subject: 150305 Human Resources Management
subject: 150306 Industrial Relations
subject: 150301 Business Information Management (incl. Records, Knowledge and Information Management, and Intelligence)
subject: 150308 International Business
subject: 150311 Organisational Behaviour
subject: 150312 Organisational Planning and Management
subject: 150314 Small Business Management
subject: 220201 Business and Labour History
subject: FOS: Philosophy, ethics and religion
subject: 150506 Marketing Theory
subject: 150205 Investment and Risk Management

description: Fruto de la naturaleza humana es el hecho de que los jefes cometan errores. Sin embargo, entre dichos errores hay algunos que perjudican seriamente a las compañías para las que los jefes trabajan.
NW-FVA Waldschutzinfo 2022-03
Creators: name: Hurling, Rainer
name: Hein, Christof
name: Rommerskirchen, Andreas
name: Rohde, Martin
Publisher: name: Zenodo
Year: 2022
Subjects: Waldschutzinfo
Borkenkäfer
Pflanzenschutzmittel
Windwurf

description: Waldschutzinfo 2022-03 der Nordwestdeutschen Forstlichen Versuchsanstalt (NW-FVA) in Göttingen zu den Themen Windwurf, Start der Borkenkäfersaison und Zulassungssituation Pflanzenschutzmittel.
title: AN, Registre des écrous du Châtelet, Y5266, f. p1000744
Creators: name: Claustre, Julie
name: Nationales, Archives
name: Archives Nationales
name: Claustre, Julie
name: ArchivesNationales/J.CLAUSTRE/H.REGAZZI/2020
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Châtelet
subject: registre

description: Registre des écrous du Châtelet, Archives Nationales, Y5266. Numérisation en mode image.
description: Bibliographic citation: Archives Nationales, Registre des écrous du Châtelet, Y5266, f. p1000744
Mental models in action: academic librarians in the classroom
Creators: name: HELEN MARY DACY
Publisher: name: Monash University
Year: 2017
Subjects: Education

description: The research found that a usable mental model about teaching forms links between an individual’s professional identity and the needs they perceive in a student. This research demonstrates that an individual’s understanding of their professional values and beliefs becomes a filter in the creation of their mental models about teaching. The findings of this current study extend earlier understandings of mental model theory by making the filtering of fragmentary mental models through this lens of values and beliefs explicit as a function of mental models. The study recommends this as an important function when considering mental models of teaching.
Library of Coastal Vulnerability Indicators Guidance Document
Creators: name: Viavattene, Christophe
name: Micou, Ana Paula
name: Owen, Damon
name: Priest, Sally
name: Parker, Dennis
Publisher: name: Middlesex University
Year: 2017
Subjects: subject: Environmental Science
subject: Geography
subject: 40604 Natural Hazards
subject: FOS: Earth and related environmental sciences

description: The Resilience-Increasing Strategies for Coasts – Toolkit (RISC-KIT) FP7 EU project (2013-2017) aims to produce a set of three innovative and EU-coherent open-source and open-access methods, tools and management approaches (the RISC-KIT) in support of coastal managers, decision-makers and policy makers to reduce risk and increase resilience to low-frequency, high impact hydro-meteorological events. Risk is defined within this project as the product of the probability of a hazard, the exposure of receptors and their vulnerability. Representing the vulnerability and the potential role of DRR in their reduction is crucial for supporting the decision. As such a specific task of the RISC-KIT project (Task 2.2) is dedicated to developing a Library of Vulnerability Indicators to input in the RISC-KIT Toolkit and to test the tools on 11 case studies. The deliverable “Coastal Vulnerability Indicator Library” is composed of a Microsoft Excel database and a guidance document. The deliverable introduces the necessary concepts and methods, provides a review and a collection of existing indicators and proposes methodologies for developing new indicators. The Library has been constructed around four categories: Built Environment, Population, Ecosystem and Systems. The Library also identifies Disaster Reduction Measures influencing vulnerability and proposes methods to include within the assessment of vulnerability.
Coastal Risk Assessment Framework Guidance Document
Creators: name: Viavattene, Christophe
name: Prof José A. Jimenez
name: Owen, Damon
name: Priest, Sally
name: Prof Dennis Parker
name: Micou, Ana Paula
name: Ly, Sophie
Publisher: name: Middlesex University
Year: 2017
Subjects: subject: 40604 Natural Hazards
subject: FOS: Earth and related environmental sciences

description: The Resilience-Increasing Strategies for Coasts – Toolkit (RISC-KIT) FP7 EU project (2013-2017) aims to produce a set of three innovative and EU-coherent open-source and open-access methods, tools and management approaches (the RISC-KIT) in support of coastal managers, decision-makers and policy makers to reduce risk and increase resilience to low-frequency, high impact hydro-meteorological events.
The Coastal Risk Assessment Framework (CRAF) is the first element of the risk assessment suite applied at a regional scale and permits a comprehensive and systematic approach to undertaking risk assessment at a variety of levels of detail. In particular, the approach reveals potential hotspots along the coasts. Hotspots are defined in the Toolkit as specific locations where high-resolution modelling and risk assessment are required to assess the coastal risk and to design and compare disaster risk reduction measures. As such, hotspots, or groups of hotspots, should be indicative of those areas where risk is highest.
To do so the CRAF consists of a 2-phase approach, Phase 1 is a coastal-index approach to identifying potential hotspots, whereas Phase 2 utilises a suite of more complex modelling processes to rank these hotpots. The coastal INtegrated DisRuption Assessment model (INDRA) has specifically been developed as an open-source and open-access model for this purpose.
This document provides guidance to CRAF users on both approaches, as well as explanations on the proposed methodologies. The CRAF is a prototype and will be trialled on the RISC-KIT case studies (WP5). Limitations in its application, the potential for a full application and the needs for further development will be discussed in Deliverable 5.1.
Additional file 1 of The spatiotemporal regulations of epicatechin biosynthesis under normal flowering and the continuous inflorescence removal treatment in Fagopyrum dibotrys
Creators: name: Guo, Xinwei
name: Luo, Zuliang
name: Zhang, Min
name: Huang, Linfang
name: Wang, Hui
name: Li, Yuting
name: Qiao, Xu
name: Li, Ailian
name: Wu, Bin
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Plant Biology

description: Additional file 1: Supplementary Figure S1. The GO enrichment analysis of the DEGs under normal flowering and the CIR treatment.
Using the Agave API and Jupyter to Run Simulations, Monitor Events, and Share and Visualize Scientific Results
Creators: name: Brandt, Steven
name: Rion Dooley
name: Traxler, Kathy
name: Fonner, John
Publisher: name: figshare
Year: 2017
Subjects: subject: Computer Software
subject: FOS: Computer and information sciences

description: As science becomes increasingly digital, researchers face new challenges and opportunities to analyze, share, and understand large volumes of data more effectively. Gateways are at the forefront of this challenge, and the Agave Platform has been at the forefront of the gateway movement. Over the last 6 years, the authors have been working to develop this Science-as-a-Service platform, making it possible for users to go from the desktop, to their local data center, to the cloud.But Agave isn’t simply a tool for building web portals–it is, first and foremost, a sophisticated tool chain that enables developers to run jobs, monitor them, collaborate, and share data. As such, it is versatile and adaptable to new environments and interfaces. One such new and innovative variation on the web application is the Jupyter notebook, which combines the best elements of both the command line and the graphical interface.
SAM-VI RNAs selectively bind S-adenosylmethionine and exhibit similarities to SAM-III riboswitches
Creators: name: Gayan Mirihana Arachchilage
name: Sherlock, Madeline E.
name: Zasha Weinberg
name: Breaker, Ronald R.
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Neuroscience
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Plant Biology
subject: Computational Biology

description: Five distinct riboswitch classes that regulate gene expression in response to the cofactor S-adenosylmethionine (SAM) or its metabolic breakdown product S-adenosylhomocysteine (SAH) have been reported previously. Collectively, these SAM- or SAH-sensing RNAs constitute the most abundant collection of riboswitches, and are found in nearly every major bacterial lineage. Here, we report a potential sixth member of this pervasive riboswitch family, called SAM-VI, which is predominantly found in Bifidobacterium species. SAM-VI aptamers selectively bind the cofactor SAM and strongly discriminate against SAH. The consensus sequence and structural model for SAM-VI share some features with the consensus model for the SAM-III riboswitch class, whose members are mainly found in lactic acid bacteria. However, there are sufficient differences between the two classes such that current bioinformatics methods separately cluster representatives of the two motifs. These findings highlight the abundance of RNA structures that can form to selectively recognize SAM, and showcase the ability of RNA to utilize diverse strategies to perform similar biological functions.
Black hole shadow and acceleration bounds for spherically symmetric spacetimes
Creators: name: Paithankar, Kajol
name: Kolekar, Sanved
Publisher: name: arXiv
Year: 2023
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We explore an interesting connection between black hole shadow parameters and the acceleration bounds for radial linear uniformly accelerated (LUA) trajectories in static spherically symmetric black hole spacetime geometries of the Schwarzschild type. For an incoming radial LUA trajectory to escape back to infinity, there exists a bound on its magnitude of acceleration and the distance of closest approach from the event horizon of the black hole. We calculate these bounds and the shadow parameters, namely the photon sphere radius and the shadow radius, explicitly for specific black hole solutions in $d$-dimensional Einstein's theory of gravity, in pure Lovelock theory of gravity and in the $\mathcal{F}(R)$ theory of gravity. We find that for a particular boundary data, the photon sphere radius $r_{ph}$ is equal to the bound on radius of closest approach $r_b$ of the incoming radial LUA trajectory while the shadow radius $r_{sh}$ is equal to the inverse magnitude of the acceleration bound $|a|_b$ for the LUA trajectory to turn back to infinity. Using the effective potential technique, we further show that the same relations are valid in any theory of gravity for static spherically symmetric black hole geometries of the Schwarzschild type. Investigating the trajectories in a more general class of static spherically symmetric black hole spacetimes, we find that the two relations are valid separately for two different choices of boundary data.
description: 27 pages, no figures, new section added, Accepted for publication in PRD
Highly motif- and organism-dependent effects of naturally occurring hammerhead ribozyme sequences on gene expression
Creators: name: Wurmthaler, Lena A.
name: Klauser, Benedikt
name: Hartig, Jörg S.
Publisher: name: Taylor & Francis
Year: 2017
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 60506 Virology
subject: Computational Biology

description: Recent bioinformatics studies have demonstrated a wide-spread occurrence of the hammerhead ribozyme (HHR) and similar small endonucleolytic RNA motifs in all domains of life. It is becoming increasingly evident that such ribozyme motifs participate in important genetic processes in diverse organisms. Although the HHR motif has been studied for more than three decades, only little is known about the consequences of ribozyme activity on gene expression. In the present study we analysed eight different naturally occurring HHR sequences in diverse genetic and organismal contexts. We investigated the influence of active ribozymes incorporated into mRNAs in mammalian, yeast and bacterial expression systems. The experiments show an unexpectedly high degree of organism-specific variability of ribozyme-mediated effects on gene expression. The presented findings demonstrate that ribozyme cleavage profoundly affect gene expression. However, the extent of this effect varies and depends strongly on the respective genetic context. The fast-cleaving type 3 HHRs [CChMVd(-) and sLTSV(-)] generally tended to cause the strongest effects on intracellular gene expression. The presented results are important in order to address potential functions of naturally occurring ribozymes in RNA processing and post-transcriptional regulation of gene expression. Additionally, our results are of interest for biotechnology and synthetic biology approaches that aim at the utilisation of self-cleaving ribozymes as widely applicable tools for controlling genetic processes.
Prediction of age at menopause in women with polycystic ovary syndrome
Creators: name: S. Minooee
name: F. Ramezani Tehrani
name: M. Rahmati
name: M. Ali Mansournia
name: F. Azizi
Publisher: name: Taylor & Francis
Year: 2017
Subjects: subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer

description: Objective: Considering the role of anti-Müllerian hormone (AMH) in female fertility and its high levels in women with polycystic ovary syndrome (PCOS), the longer reproductive span of these women is in doubt. In the present study, we aimed to improve earlier predictions using a non-linear model to substantiate the question as to whether PCOS women reach menopause later. Methods: In total, 1162 women aged 20–50 years, comprising 378 PCOS cases and 784 eumenorrheic non-hirsute women, met the eligibility criteria. A scatterplot matrix was drawn to detect the association between age and AMH; this association was explored using a fractional polynomial regression model. Model assumptions were checked by examining the distribution of the residuals and plotting the standardized residuals against the functional form of AMH. Results: The serum concentration of AMH among PCOS participants was significantly higher than in the controls (5.4 ng/ml (IQR 2.8–9.1 ng/ml) vs. 1.4 ng/ml (IQR 0.6–2.7 ng/ml), p Conclusions: These findings provide the insight that, as reflected through significantly higher average levels of AMH in PCOS women, their predicted reproductive lifespan could be 2 years longer than their normo-ovulatory counterparts.
title: ADCO, Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Cart. 32 (G 136), 745 folios, f. 0482
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: Petot, Frédéric
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: cartulaire
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge

description: Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Archives départementales de la Côte-d'Or, Cart. 32 (G 136), 745 folios, f. 0482, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Archives départementales de la Côte-d'Or, Cart. 32 (G 136), 745 folios, f. 0482, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
A new scale in the quasi-static limit of Aether Scalar Tensor Theory
Creators: name: Mistele, Tobias
Publisher: name: arXiv
Year: 2023
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: One of the aims of Aether Scalar Tensor Theory (AeST) is to reproduce the successes of Modified Newtonian Dynamics (MOND) on galactic scales. Indeed, the quasi-static limit of AeST achieves precisely this, assuming that the vector field $\vec{A}$ vanishes and that the so-called ghost condensate can be neglected. The effects of the ghost condensate were investigated in detail in previous studies. Here, we focus on the assumption of a vanishing vector field. We argue that this assumption is not always justified and show how to correctly take into account the vector field, finding that the quasi-static limit depends on a model parameter $m_\times$. In the limit $m_\times \to 0$, one recovers the quasi-static limit with a vanishing vector field. In particular, one finds a two-field version of MOND. In the opposite limit, $m_\times \to \infty$, one finds a single-field version of MOND. We show that, in practice, much of the phenomenology of the quasi-static limit depends only very little on the value of $m_\times$. Still, for some observational tests, such as those involving wide binaries, $m_\times$ has percent-level effects that may be important.
description: 16 pages, 6 figures; accepted for publication in PRD
Asymptotic-based bootstrap approach for matched pairs with missingness in a single arm
Creators: name: Amro, Lubna
name: Pauly, Markus
name: Ramosaj, Burim
Publisher: name: TU Dortmund
Year: 2021
Subjects: subject: Matched pairs
subject: Missing values
subject: Parametric bootstrap
subject: Quadratic forms
subject: 310

description: The issue of missing values is an arising difficulty when dealing with paired data. Several test procedures are developed in the literature to tackle this problem. Some of them are even robust under deviations and control type-I error quite accurately. However, most of these methods are not applicable when missing values are present only in a single arm. For this case, we provide asymptotic correct resampling tests that are robust under heteroskedasticity and skewed distributions. The tests are based on a meaningful restructuring of all observed information in quadratic form–type test statistics. An extensive simulation study is conducted exemplifying the tests for finite sample sizes under different missingness mechanisms. In addition, illustrative data examples based on real life studies are analyzed.
description: Biometrical journal;63(7)
Amtliche Mitteilungen der Technischen Universität Dortmund Nr.10/2022
Creators: name: (:Unkn) Unknown
Publisher: name: Technische Universität Dortmund
Year: 2022
Subjects: subject: 080

description: Allgemeine Verfahrensordnung für Gremien der Technischen Universität Dortmund
description: Amtliche Mitteilungen der Technischen Universität Dortmund;2022; 10
SAM-VI RNAs Selectively Bind S-adenosylmethionine and Exhibit Similarities to SAM-III Riboswitches
Creators: name: Gayan Mirihana Arachchilage
name: Sherlock, Madeline E
name: Zasha Weinberg
name: Breaker, Ronald R
Publisher: name: Taylor & Francis
Year: 2017
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Neuroscience
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Plant Biology
subject: Computational Biology

description: Five distinct riboswitch classes that regulate gene expression in response to the cofactor S-adenosylmethionine (SAM) or its metabolic breakdown product S-adenosylhomocysteine (SAH) have been reported previously. Collectively, these SAM- or SAH-sensing RNAs constitute the most abundant collection of riboswitches, and are found in nearly every major bacterial lineage. Here, we report a potential sixth member of this pervasive riboswitch family, called SAM-VI, which is predominantly found in Bifidobacterium species. SAM-VI aptamers selectively bind the cofactor SAM and strongly discriminate against SAH. The consensus sequence and structural model for SAM-VI share some features with the consensus model for the SAM-III riboswitch class, whose members are mainly found in lactic acid bacteria. However, there are sufficient differences between the two classes such that current bioinformatics methods separately cluster representatives of the two motifs. These findings highlight the abundance of RNA structures that can form to selectively recognize SAM, and showcase the ability of RNA to utilize diverse strategies to perform similar biological functions.
Species pool distributions along functional trade-offs shape plant productivity–diversity relationships
Creators: name: Chalmandrier, Loïc
name: Albouy, Camille
Publisher: name: figshare
Year: 2019
Subjects: subject: Ecology
subject: FOS: Biological sciences

description: Scripts, data necessary to re-do the simulations and simulation analysis of the article "Species pool distributions along functional trade-offs shape plant productivity–diversity relationships"
Quantum coherence assisted dynamical phase transition
Creators: name: Xu, Bao-Ming
Publisher: name: arXiv
Year: 2023
Subjects: subject: Quantum Physics (quant-ph)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: Quantum coherence will undoubtedly play a fundamental role in understanding the dynamics of quantum many-body systems, thereby to reveal its genuine contribution is of great importance. In this paper, we specialize our discussions on the one-dimensional transverse field quantum Ising model initialized in the coherent Gibbs state, and investigate the effects of quantum coherence on dynamical phase transition (DQPT). After quenching the strength of the transverse field, the effects of quantum coherence are studied by Fisher zeros, rate function and winding number. We find that quantum coherence not only recovers the traditional DQPT related to quantum phase transition, but also generates some entirely new DQPTs which are independent of equilibrium quantum critical point. In these entirely new QDPTs, the line of Fisher zeros cuts the imaginary axis twice, i.e., there are two critical modes, one makes the winding number jump down but another makes it jump up. We also find that the rate function can not be used to describe DQPT at high temperature, because the critical mode no longer dominates. This work sheds new light on the fundamental connection between quantum critical phenomena and quantum coherence.
description: Added some discussions of topology; 11 pages, 4 figures; Comments welcome!
The Mixturegram: A Visualization Tool for Assessing the Number of Components in Finite Mixture Models
Creators: name: Young, Derek S.
name: Chenlu Ke
name: Xiaoxue Zeng
Publisher: name: Taylor & Francis
Year: 2017
Subjects: subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics

description: Certain practical and theoretical challenges surround the estimation of finite mixture models. One such challenge is how to determine the number of components when this is not assumed a priori. Available methods in the literature are primarily numerical and lack any substantial visualization component. Traditional numerical methods include the calculation of information criteria and bootstrapping approaches; however, such methods have known technical issues regarding the necessary regularity conditions for testing the number of components. The ability to visualize an appropriate number of components for a finite mixture model could serve to supplement the results from traditional methods or provide visual evidence when results from such methods are inconclusive. Our research fills this gap through development of a visualization tool, which we call a mixturegram. This tool is easy to implement and provides a quick way for researchers to assess the number of components for their hypothesized mixture model. Mixtures of univariate or multivariate data can be assessed. We validate our visualization assessments by comparing with results from information criteria and an ad hoc selection criterion based on calculations used for the mixturegram. We also construct the mixturegram for two datasets.
Purification, biochemical, and thermal properties of fibrinolytic enzyme secreted by Bacillus cereus SRM-001
Creators: name: Narasimhan, Manoj Kumar
name: Selvarajan Ethiraj
name: Tamilarasan Krishnamurthi
name: Mathur Rajesh
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Biophysics
subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: The discovery of microbial fibrinolytic enzymes is essential to treat cardiovascular diseases. This study reports the discovery of a fibrinolytic enzyme secreted by Bacillus cereus SRM-001, a microorganism isolated from the soil of a chicken waste-dump yard. The B. cereus SRM-001 was cultured and the secreted fibrinolytic enzyme purified to show that it is a ∼28 kDa protein. The purified enzyme was characterized for its kinetics, biochemical and thermal properties to show that it possesses properties similar to plasmin. A HPLC-MS/MS analysis of trypsin digested protein indicated that the fibrinolytic enzyme shared close sequence homology with serine proteases reported for other Bacillus sp. The results show that the B. cereus SRM-001 secreted enzyme is a ∼28 kDa serine protease that possesses fibrinolytic potential.
Start from being a student – Ācārya dr. Sthaneshwar Timalsina
Creators: name: Timalsina, Staneshwar
Publisher: name: Zenodo
Year: 2022
Subjects: Guhyakālī
Kubjika
amnaya
Kaula
timalsina
Divine Mother
consciousness
krama
Kula
Īśāna
shakta upāya
Saundaryalahari
Mālinīvijayottaratantra
Chandi
advaita vedanta
sthaneshwar timalsina
vimarsha-foundation
Sarvamnaya
Abhinavagupta
vedanta
Kali
Devi Mahatmya
trika
Spanda
Shiva Sutra
Tantra
mahadeva
saivadvaita
shakti
sarvamnaya-oral-tradition-archive
Vasugupta
Tripura Rahasya
sarvamnaya
anava upaya
agama
Sadāśiva
Camunda
Shiva
Bhairava
yantra
Mahakali
tripura
Tantric philosophy
Shaiva
tantraloka
Durga
shambhava
Kashmir Shaivism
Tripurasundari

description: Excerpt from the Śivajñānabodha course Q&A session, that is accessible through the website: https://www.vimarshafoundation.org/courses

Source: SJB_QA_27_March_2022

Original YouTube video: https://www.youtube.com/watch?v=zVYs4LSd9Zk

This presentation is part of the Sarvāmnāya Oral Tradition Archive.
Vimarsha Foundation. (2025). The Sarvāmnāya Oral Tradition Archive [Data set]. Zenodo. https://doi.org/10.5281/zenodo.15188107
CO2 leakage simulation: effects of the pH decrease on fertilisation and larval development of Paracentrotus lividus and sediment metals toxicity
Creators: name: M. Dolores Basallote
name: Rodríguez-Romero, Araceli
name: Manoela R. De Orte
name: T. Ángel DelValls
name: Riba, Inmaculada
Publisher: name: Taylor & Francis
Year: 2017
Subjects: subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Carbon capture and storage has become a new mitigation option to reduce anthropogenic CO2 emissions. The effects of the CO2-related acidification, associated with unpredictable leaks of CO2 during the operational phases were studied using the Paracentrotus lividus sea urchin-liquid-phase-assays (fertilisation and embryo-larval development tests). Besides to the direct effects of the CO2-associated pH decrease, the possible effects on marine sediment toxicity were studied by exposing the urchin larvae to elutriate of sediments with different metals concentration, which were subjected to various pH treatments. The resulted median toxic effect pH ranged from 6.33 ± 0.02 and 6.91 ± 0.01 for the egg fertilisation, and between 6.66 ± 0.03 and 7.16 ± 0.01 for the larval development assays. Concentrations of Co, Zn, As, Cu, and Fe were detected in the sediment elutriates. For all the sediment elutriates tested the amount of the dissolved Zn increased in parallel with the pH reductions. Correlated effects of acidification, biological response, and the presence of dissolved metals were observed in this work evidencing that the most important factor controlling the reduction of egg fertilisation and larval development success was the combined effects of the reduction of pH and the presence of the contaminants (mainly Zn, Co, and As).
title: ADCO, Septième cartulaire de Saint-Étienne de Dijon (1661-1665), Cart. 29 (G 134), 996 folios, f. 0096
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: cartulaire
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: Septième cartulaire de Saint-Étienne de Dijon (1661-1665), Archives départementales de la Côte-d'Or, Cart. 29 (G 134), 996 folios, f. 0096, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Septième cartulaire de Saint-Étienne de Dijon (1661-1665), Archives départementales de la Côte-d'Or, Cart. 29 (G 134), 996 folios, f. 0096, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https://manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019