cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Automated machine learning for intelligent systems
Creators: name: Li, Zelong
Publisher: name: No Publisher Supplied
Year: 2024

description: The fast progress in Machine Learning techniques has led to a growing impact of Artificial Intelligence (AI) on various aspects of people's lives. AI model learning comprises three vital components: data inputs, model design, and loss functions. Each of these components makes a significant contribution to the AI system's performance. Traditionally, these components needed skilled domain experts to meticulously design them, creating a challenging barrier to entry into AI. Besides, manual approaches are relatively inefficient and often fail to achieve optimal results. Recently, automated machine learning (AutoML), such as neural architecture search (NAS), has tried to tackle the challenge by automating the design and parameters of deep models. However, traditional AutoML research mainly focuses on automated model design instead of the inputs and loss functions, and AutoML's research on recent large language models (LLMs) is still in its infancy due to the enormous computations required. Consequently, this thesis aims at answering the following questions: 1. How can we design AutoML techniques for the other two essential parts of AI systems, i.e., inputs and loss functions? 2. What is the role of AutoML under the background of the rapid development of large-scale models such LLMs? How can we leverage the insights of AutoML to improve gls{LLM}s?Given these questions, this thesis introduces three research works: 1. We propose AutoLossGen [1], which can generate the most effective loss function using basic mathematical operations for various recommendation tasks and models. The generated loss gives better recommendation performance than commonly used baseline losses and is transferable to another model or dataset on the same recommendation task. 2. As for the data input aspect, we create the Personalized Automatic Prompt for Recommendation Language Model (PAP-REC) framework [2]. This framework aims to teach language models the optimal automatic input instructions, i.e., prompts, for recommendation tasks. We develop surrogate metrics and leverage an alternative updating schedule to address the inflated search space derived from personalized prompts. Our PAP-REC framework manages to generate personalized prompts, and the automatically generated prompts outperform manually constructed prompts. 3. For LLM-based agents, our Formal-LLM framework utilizes formal language through automaton to automate the workflow of LLM-based agents when solving complex tasks under constraints [3]. Our framework enables the agents to automatically adhere to the planning policy with automata guidance, resulting in more controllable LLM-based agents.In these three studies, through the development of automated machine learning techniques at various stages of an AI pipeline, we further advance both small-scale and large-scale intelligent systems, making them more precise, effective and user-friendly.
Additional file 2 of Osteoarthritic chondrocytes undergo a glycolysis-related metabolic switch upon exposure to IL-1b or TNF
Creators: name: Defois, Anais
name: Bon, Nina
name: Charpentier, Alexandre
name: Georget, Melina
name: Gaigeard, Nicolas
name: Blanchard, Frederic
name: Hamel, Antoine
name: Waast, Denis
name: Armengaud, Jean
name: Renoult, Ophelie
name: Pecqueur, Claire
name: Maugars, Yves
name: Boutet, Marie-Astrid
name: Guicheux, Jerome
name: Vinatier, Claire
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Pharmacology
subject: Biotechnology
subject: Evolutionary Biology
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Cancer

description: Additional file 2: Fig. S2. Glycolysis-linked metabolic pathways. (a,b) Heatmaps displaying the log2 (Fold-Change) in OACs and NCs for genes associated with (a) hexosamine biosynthesis pathway and (b) pentose phosphate pathway. ns.: not significant.
Appendix_1_1 – Supplemental material for Development and validation of a diverticular clinical score for symptomatic uncomplicated diverticular disease after acute diverticulitis in a prospective patient cohort
Creators: name: Lahat, Adi
name: Fidder, Herma H
name: Shomron Ben-Horin
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111199 Nutrition and Dietetics not elsewhere classified
subject: FOS: Health sciences
subject: 111299 Oncology and Carcinogenesis not elsewhere classified
subject: FOS: Clinical medicine
subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified

description: Supplemental material, Appendix_1_1 for Development and validation of a diverticular clinical score for symptomatic uncomplicated diverticular disease after acute diverticulitis in a prospective patient cohort by Adi Lahat, Herma H Fidder and Shomron Ben-Horin in Therapeutic Advances in Gastroenterology
Additional file 3 of Medical student-led implementation of preclinical abortion didactic session at a California medical school
Creators: name: Masini, Irene
name: Rosecrance, Katherine
name: Patibandla, Yamini
name: Barker, Margot
name: Cardall Jarvis, Anna
name: Patel, Jasmine
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Science Policy

description: Supplementary Material 3
sj-pdf-1-mcr-1077558720960326 – Supplemental material for Inside the Black Box of Improving on Nursing Home Quality Measures
Creators: name: Davila, Heather
name: Shippee, Tetyana P.
name: Park, Young Shin
name: Brauner, Daniel
name: Werner, Rachel M.
name: R. Tamara Konetzka
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111799 Public Health and Health Services not elsewhere classified
subject: FOS: Health sciences
subject: 160807 Sociological Methodology and Research Methods
subject: FOS: Sociology

description: Supplemental material, sj-pdf-1-mcr-1077558720960326 for Inside the Black Box of Improving on Nursing Home Quality Measures by Heather Davila, Tetyana P. Shippee, Young Shin Park, Daniel Brauner, Rachel M. Werner and R. Tamara Konetzka in Medical Care Research and Review
title: Επανάχρηση σταφιδεργοστασίου Παπιδάκη και ενεργοποίηση δημόσιου χώρου

title: Reuse of Papidaki raisin factory and activation of public space
Creators: name: Ιερωνυμακης Γεωργιος
Publisher: name: Technical University of Crete
Year: 2025

description: H εργασία αποσκοπεί στην επανάχρηση του παλιού εργοστασίου Παπιδάκη, και την ενεργοποίηση  του Δημόσιου χώρου.Μέσα από την στρατηγική δίνεται μία διαφορετική πρόταση, για την ενεργοποίηση του δημόσιου χώρου, και την ομαλή ένταξη του στον αστικό ιστό- ιστορικό κέντρο. Δίνει την απάντηση σε ερωτήματα όπως: H επανάχρηση βιοτεχνικών κελύφων, μπορεί να παίξει ρόλο στην αστική αναβίωση; Ποια είναι η σχέση του ιστορικού κέντρου με την θάλασσα;
sj-pdf-2-smm-10.1177_0962280220952833 - Supplemental material for Optimal two-stage sampling for mean estimation in multilevel populations when cluster size is informative
Creators: name: Innocenti, Francesco
name: Math JJM Candel
name: Tan, Frans ES
name: Breukelen, Gerard JP Van
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: 111099 Nursing not elsewhere classified
subject: 160807 Sociological Methodology and Research Methods
subject: FOS: Sociology

description: Supplemental material, sj-pdf-2-smm-10.1177_0962280220952833 for Optimal two-stage sampling for mean estimation in multilevel populations when cluster size is informative by Francesco Innocenti, Math JJM Candel, Frans ES Tan and Gerard JP van Breukelen in Statistical Methods in Medical Research
Additional file 1 of Assessing real-world gait with digital technology? Validation, insights and recommendations from the Mobilise-D consortium
Creators: name: Micó-Amigo, M. Encarna
name: Bonci, Tecla
name: Paraschiv-Ionescu, Anisoara
name: Ullrich, Martin
name: Kirk, Cameron
name: Soltani, Abolfazl
name: Küderle, Arne
name: Gazit, Eran
name: Salis, Francesca
name: Alcock, Lisa
name: Aminian, Kamiar
name: Becker, Clemens
name: Bertuletti, Stefano
name: Brown, Philip
name: Buckley, Ellen
name: Cantu, Alma
name: Carsin, Anne-Elie
name: Caruso, Marco
name: Caulfield, Brian
name: Cereatti, Andrea
name: Chiari, Lorenzo
name: D’Ascanio, Ilaria
name: Eskofier, Bjoern
name: Fernstad, Sara
name: Froehlich, Marcel
name: Garcia-Aymerich, Judith
name: Hansen, Clint
name: Hausdorff, Jeffrey M.
name: Hiden, Hugo
name: Hume, Emily
name: Keogh, Alison
name: Kluge, Felix
name: Koch, Sarah
name: Maetzler, Walter
name: Megaritis, Dimitrios
name: Mueller, Arne
name: Niessen, Martijn
name: Palmerini, Luca
name: Schwickert, Lars
name: Scott, Kirsty
name: Sharrack, Basil
name: Sillén, Henrik
name: Singleton, David
name: Vereijken, Beatrix
name: Vogiatzis, Ioannis
name: Yarnall, Alison J.
name: Rochester, Lynn
name: Mazzà, Claudia
name: Del Din, Silvia
Publisher: name: figshare
Year: 2024
Subjects: Space Science
Medicine
Biological Sciences not elsewhere classified
Information Systems not elsewhere classified

description: Additional file 1. Details of ranking methodology.
A Description Framework for Research Software and Metadata Publication Policies
Creators: name: Pape, David
name: Bertuch, Oliver
name: Huste, Tobias
name: Knodel, Oliver
name: Meinel, Michael
name: Kernchen, Sophie
name: Heeb, Nitai
name: Meeßen, Christian
Publisher: name: Zenodo
Year: 2025
Subjects: metadata
rdf
policies
shacl
software-publication

description: The curation of software metadata safeguards their quality and compliance with institutional software policies. Moreover, metadata that was enriched with development and usage information can be used for evaluation and reporting of academic KPIs. Software CaRD ("Software Curation and Reporting Dashboard"; ZT-I-PF-3-080), a project funded by the Helmholtz Metadata Collaboration (HMC), develops tools to support the curation and reporting steps of the research software publication process. The dashboard will present metadata collected by the HERMES workflow in a graphical user interface, assess compliance with a configurable set of policies, and highlight issues and breaches. It will be usable both standalone and in a CI/CD context.

As a first step in the project, and as a foundation for the curation dashboard, a description format for software publication policies had to be developed. Our solution takes an approach that allows for configuration at different levels of abstraction: Low level building blocks describe metadata (e.g., CodeMeta) validation in terms of the Shapes Constraint Language (SHACL). A higher-level configuration language allows users to reuse and parameterize these components. This makes Software CaRD usable for RSEs, management, and policy makers, and it allows for customization that facilitates usage in different research institutions.

This poster submission presents our approach, showcases example policies, and gives guidance to users of the application.
The impact of the overturn of Roe v. Wade on genetic counseling students’ decision of program selection and ranking: a multi-perspective survey of genetic counseling students and program leadership
Creators: name: Schlosser, Kimberly A.
Publisher: name: No Publisher Supplied
Year: 2024

description: On June 24, 2022, the United States Supreme Court overturned Roe v. Wade in the case of Dobbs v. Jackson Women’s Health Organization, ultimately taking away the federal constitutional right to an abortion (Kaufman et al., 2022). This groundbreaking ruling granted states authority to regulate abortion policies. While studies have evaluated prenatal genetic counselors’ perception of the impact of abortion legislation on genetic counseling (Jayaraman et al., 2021), none explored the impact of the overturn of Roe v. Wade on program selection and ranking for genetic counseling applicants. This study aims to assess the most influential factors when selecting, applying, and ranking genetic counseling training programs. Additionally, to evaluate the impact of the Dobb’s decision on genetic counseling programs by comparing the percent change in the total number of applicants across three consecutive application cycles from 2020 to 2022. Two surveys were created, one for United States-based genetic counseling program leadership, and another for current students and alumni from 2020 to 2022. Genetic counseling programs in states with fewer abortion restrictions showed varying application trends that were not consistent with a significant impact from abortion restrictions. Survey results indicated that abortion-related factors were not among the leading factors that contributed to students’ decision to apply and/or rank various genetic counseling programs. Primary factors influencing application decisions included geographical location (92.0%), program’s values and culture (85.9%), and interaction with program leadership and faculty (80.3%) as compared to ranking various programs, the most important factors were the program’s values and culture (89.7%), variety and length of clinical rotations (87.4%), and interactions with program leadership and faculty (86.6%). This is the first study to assess the implications of the overturn of Roe v. Wade on genetic counseling programs and students’ decision-making process during this critical period. While our research did not find abortion-related concerns as primary factors influencing students’ decisions to apply and/or rank genetic counseling programs, it is evident that the significance of the topic of abortion has increased, and it was a factor considered by students during the decision-making process.
Relational Design for Transitions Within US Suburbs
Creators: name: Dorn, Erica
Publisher: name: Carnegie Mellon University
Year: 2024
Subjects: Design History and Theory

description: Suburbs in the United States are seedbeds for systemic change.  But entrenched stigmas often obscure the rapid social and environmental changes within suburbs and their untapped potential to catalyze transitions toward more equitable and sustainable futures.  
In the U.S.,more people live and work in suburbs than in urban and rural areas combined. Suburbs are also becoming some of the most demographically diverse places in the country, where most immigrants to the U.S. arrive and establish their lives. These in-between places  grapple with numerous complex challenges related to uneven mobilities, including institutional racism, lack of affordable multi-family housing, inadequate public transportation, and insufficient civic infrastructure. If national and international agendas for systemic change seek to progress toward more just and sustainable futures, acknowledging  U.S. suburbs as crucial sites for catalyzing transitions is imperative.
This dissertation, a culmination of 13 practice-oriented research projects, including the formation of a non-profit organization, Suburb Futures, operationalizes theories related to place, mobility, and relationality  through the framework of Transition Design. The dissertation contends  that designing for transitions requires transdisciplinary, community-led approaches that honor the primacy of motion and distributed and  polycentric relationships to place. It concludes with a proposal for an “ecology of systems interventions” to design for transitions through relational practices that leverage the trajectory of the suburbanization of place toward more equitable and sustainable futures
Additional file 1 of Cervical cancer screening among English- and Spanish-speaking Hispanic women in an urban safety net health system, 2015–2020
Creators: name: Amboree, Trisha L.
name: Parker, Susan Lackey
name: Bulsara, Shaun
name: Anderson, Matthew L.
name: Schmeler, Kathleen M.
name: Chiao, Elizabeth Y.
name: Montealegre, Jane R.
Publisher: name: figshare
Year: 2024
Subjects: Medicine
Biotechnology
Cancer
Science Policy

description: Additional file 1: Supplementary materials. Supplementary Table 1. Description of Terms. Supplementary Table 2. Post-hoc analyses assessing pairwise comparisons of omnibus testing presented in Table 1. Supplementary Table 3. Post-hoc analyses assessing pairwise comparisons of omnibus testing presented in Table 2.
Additional file 1 of Neurocognition and functioning in adolescents at clinical high risk for psychosis
Creators: name: Mensi, Martina Maria
name: Orlandi, Marika
name: Casini, Erica
name: Catalan, Ana
name: de Pablo, Gonzalo Salazar
name: Fusar-Poli, Paolo
name: Borgatti, Renato
Publisher: name: figshare
Year: 2024
Subjects: Cell Biology
Biological Sciences not elsewhere classified
Cancer
Science Policy
Mental Health

description: Additional file 1. The Reporting of studies Conducted using the Observational Routinely collected health Data(RECORD) statement.
sj-pdf-1-ipe-10.1177_2041669520950749 - Supplemental material for Aesthetic Perception of Line Patterns: Effect of Edge-Orientation Entropy and Curvilinear Shape
Creators: name: Stanischewski, Sarah
name: Altmann, Carolin S.
name: Brachmann, Anselm
name: Redies, Christoph
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 110904 Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: 110319 Psychiatry (incl. Psychotherapy)
subject: Neuroscience

description: Supplemental material, sj-pdf-1-ipe-10.1177_2041669520950749 for Aesthetic Perception of Line Patterns: Effect of Edge-Orientation Entropy and Curvilinear Shape by Sarah Stanischewski, Carolin S. Altmann, Anselm Brachmann and Christoph Redies in i-Perception
Supplemental_Digital_Content - Spirituality, Religion, and Medicine Education for Internal Medicine Residents
Creators: name: Piscitello, Gina M.
name: Martin, Shannon
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 111099 Nursing not elsewhere classified
subject: FOS: Health sciences
subject: 111702 Aged Health Care

description: Supplemental_Digital_Content for Spirituality, Religion, and Medicine Education for Internal Medicine Residents by Gina M. Piscitello and Shannon Martin in American Journal of Hospice and Palliative Medicine®
Understanding the flow behavior of bulk secondary solid plastics using POM Regrind as a case study
Creators: name: Kibet, Ivan
name: Wieser, Jürgen
Publisher: name: Zenodo
Year: 2024

description: In response to the imperative for sustainable growth, the plastics industry increasingly incor-porates secondary plastic materials into manufacturing processes. However, transitioning to a sustainable economy presents numerous challenges, including those of a process engineer-ing nature. One such challenge concerns the perceived unpredictable flow behaviour of bulk solid secondary plastics, stemming from their irregular shapes and particle size distributions. Conventional design calculations based on idealized uniform particles, as used for virgin plas-tics, are inadequate for setting up compounding processes with secondary plastics. Current practices rely on inefficient trial and error methods, resulting in unstable processes prone to failure. This study endeavours to develop a theoretical framework to describe the flow behav-iour of secondary plastics, focusing on a POM regrind sample as a representative case. The study’s approach integrates correlational analysis of particle shape and size distributions, powder rheometry measurements and dosing experiments to provide insights essential to de-scribing flow mechanisms inherent to bulk solid secondary plastics. Preliminary observations indicate dosing inaccuracies of up to 25% with the POM regrind material. Furthermore, some bulk properties determined in powder rheometry i.e. flow rate index, specific energy correlate very well with the dosing performance of the material.
Additional file 1 of Reciprocal relationships between self-esteem, coping styles and anxiety symptoms among adolescents: between-person and within-person effects
Creators: name: Li, Wenyan
name: Guo, Yangfeng
name: Lai, Wenjian
name: Wang, Wanxin
name: Li, Xiuwen
name: Zhu, Liwan
name: Shi, Jingman
name: Guo, Lan
name: Lu, Ciyong
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Additional file 1: Table S1. Baseline sample characteristics between follow-up and loss to follow-up participants. Table S2. The demographic characteristics of the study participants at baseline by sex. Table S3. Chi-square statistics for sex differences in specific paths of the selected models. Table S4. Significant indirect paths between self-esteem, coping styles, and anxiety symptoms for the RI-CLPM (Standardized Coefficients).
D4.6: Automatic Subspace Generation (ASG)
Creators: name: Kannan, Venkatesh
name: Chagas, Bruno
name: Sanchez-Sanz, Goar
name: Lauret Martinez de Rituerto, Pablo
Publisher: name: Zenodo
Year: 2023
Subjects: subject: Quantum chemistry
subject: molecular fragmentation

description: The NEASQC project aims at demonstrating and advancing the capabilities of NISQ-era devices through the development of practically-relevant use-cases.

In WP4 to develop chemistry use-cases, Task 4.1 is to develop a tool to fragment the structure of a given molecular system into subsystems that retain the chemical meaning. To address this, the Automatic Subspace Generation (ASG) is a new tool designed to fragment the structure of the system into smaller subsystems. The motivation is that the smaller subsystems could fit into a quantum computer compared to the larger molecular system to perform energy calculations, and can be explored by the users of the AGS tool.

This deliverable D4.6 titled “Automatic Subspace Generation (ASG) v1.0” is a short report accompanying the ASG open source software called KraChem that has been produced and is available in the NEASQC GitHub repository under the project qfrag (Chagas et al., 2023). The deliverable outlines the key functions of KraChem along with pointers to the repository of its implementation and a quick start user guide.
SC-19-0059_Effects_of_Uncertainty_Framing__SupplementFINALSP – Supplemental material for The Effects of Uncertainty Frames in Three Science Communication Topics
Creators: name: Gustafson, Abel
name: Rice, Ronald E.
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 200199 Communication and Media Studies not elsewhere classified
subject: FOS: Media and communications
subject: Science Policy

description: Supplemental material, SC-19-0059_Effects_of_Uncertainty_Framing__SupplementFINALSP for The Effects of Uncertainty Frames in Three Science Communication Topics by Abel Gustafson and Ronald E. Rice in Science Communication
Additional file 2 of Efficacy of COVID-19 mRNA vaccination in patients with autoimmune disorders: humoral and cellular immune response
Creators: name: Filippini, Federica
name: Giacomelli, Mauro
name: Bazzani, Chiara
name: Fredi, Micaela
name: Semeraro, Paolo
name: Tomasi, Cesare
name: Franceschini, Franco
name: Caruso, Arnaldo
name: Cavazzana, Ilaria
name: Giagulli, Cinzia
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 2: Supplemental figure 1. Dendogram using Ward Linkage.
Additional file 9 of Efficacy of COVID-19 mRNA vaccination in patients with autoimmune disorders: humoral and cellular immune response
Creators: name: Filippini, Federica
name: Giacomelli, Mauro
name: Bazzani, Chiara
name: Fredi, Micaela
name: Semeraro, Paolo
name: Tomasi, Cesare
name: Franceschini, Franco
name: Caruso, Arnaldo
name: Cavazzana, Ilaria
name: Giagulli, Cinzia
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 9: Supplemental figure 5. Comparison of plasma levels of antibodies anti-nucleocapsid protein (A), effector memory CD4 T cells (B), CD4/CD8 ratio balance (C) and CD3 T cells(D) for each group of patients between the second and third dose of COVID-19 vaccine. The data are shown as box plots (extremes of the box are at the bottom the first and at the top the third quartile, the inner row is the median and the upper line and lower line are the highest and lowest value). HC=Healthy Controls, ABA=abatacept, TCZ=tocilizumab, RTX=rituximab, IVIG=intravenous immunoglobulin.
Additional file 7 of Efficacy of COVID-19 mRNA vaccination in patients with autoimmune disorders: humoral and cellular immune response
Creators: name: Filippini, Federica
name: Giacomelli, Mauro
name: Bazzani, Chiara
name: Fredi, Micaela
name: Semeraro, Paolo
name: Tomasi, Cesare
name: Franceschini, Franco
name: Caruso, Arnaldo
name: Cavazzana, Ilaria
name: Giagulli, Cinzia
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 7: Supplemental figure 4. Fold increase levels of CCL2 (A), CXCL8 (B) and CCL5 between unstimulated (NS) and CD4 T cells stimulated with spike-derived peptide QFN Ag1, fold increase levels between unstimulated (NS) and CD4/CD8 T cells stimulated with spike-derived peptide QFN Ag2among different groups of patients, as indicated, after the second dose ofCOVID-19 vaccine. The data are shown as box plot (extremes of the box are at the bottom the first and at the top the third quartile, the inner row is the median and the upper line and lower line are the highest and lowest values). HC=Healthy Controls, ABA=abatacept, TCZ=tocilizumab, RTX=rituximab, IVIG=intravenous immunoglobulin.
Additional file 3 of Efficacy of COVID-19 mRNA vaccination in patients with autoimmune disorders: humoral and cellular immune response
Creators: name: Filippini, Federica
name: Giacomelli, Mauro
name: Bazzani, Chiara
name: Fredi, Micaela
name: Semeraro, Paolo
name: Tomasi, Cesare
name: Franceschini, Franco
name: Caruso, Arnaldo
name: Cavazzana, Ilaria
name: Giagulli, Cinzia
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 3: Supplemental table 2. cluster 1 and 2 composition.
Additional file 5 of Efficacy of COVID-19 mRNA vaccination in patients with autoimmune disorders: humoral and cellular immune response
Creators: name: Filippini, Federica
name: Giacomelli, Mauro
name: Bazzani, Chiara
name: Fredi, Micaela
name: Semeraro, Paolo
name: Tomasi, Cesare
name: Franceschini, Franco
name: Caruso, Arnaldo
name: Cavazzana, Ilaria
name: Giagulli, Cinzia
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 5: Supplemental figure 2. Comparison of plasma levels of antibodies anti-nucleocapsid protein (A), effector memory CD4 T cells (B), CD4/CD8 ratio balance (C) and CD3 T cells (D) among the different treatment groups of patients after the second dose of vaccine. The data are shown as box plots. HC=Healthy Controls, ABA=abatacept, TCZ=tocilizumab, RTX=rituximab, IVIG= intravenous immunoglobulin.
Supplemental Material, 190701_Appendix_1 - When do political parties prioritize labour? Issue attention between party competition and interest group power
Creators: name: Otjes, Simon
name: Green-Pedersen, Christoffer
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 160607 International Relations
subject: FOS: Political science

description: Supplemental Material, 190701_Appendix_1 for When do political parties prioritize labour? Issue attention between party competition and interest group power by Simon Otjes and Christoffer Green-Pedersen in Party Politics
Honeys from Patagonia revealed notable pesticide residues in small-scale agricultural landscapes in the past decade
Creators: name: Bogo, Gherardo
name: de Groot, Grecia S.
name: Medici, Sandra
name: Winter, Josefina
name: Aizen, Marcelo A.
name: Morales, Carolina L.
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Biophysics
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Plant Biology

description: Bees are major pollinators of wild and cultivated plants. Pesticides have been pointed out as a major driver of wild bee declines and of notorious honey bee colony losses, with high pesticide inputs frequently linked to large-scale agriculture. We explored the presence of pesticide residues in Apis mellifera honeys from a region characterised by small-scale agriculture in North-western Patagonia, Argentina in 2014. We compared Argentine and European Union (EU) regulations for pesticide residues found, and investigated the correlation with the botanical diversity of honey palynological spectrum. We identified residues of four pesticides in seven out of ten samples (the organophosphates Chlorpyrifos-ethyl, Pirimiphos-methyl and Dichlorvos, and the pyrethroid Cypermethrin); with concentrations higher than the maximum residue levels allowed in honey by UE. We found moderate evidence that the number of pesticides in honey correlated negatively with the diversity of pollen spectrum. Our results suggest risks due to pesticides to pollinators and human health also in small-scale agricultural areas. We highlight the need of strengthen regulations and controls in Argentina and Latin America regarding pesticide use in agriculture and pesticide residues in honey.
Differences in the link between female moth oviposition and larval fitness in Grapholita molesta (Lepidoptera: Tortricidae) over seasonal variation of host fruit species
Creators: name: Wang, Yi
name: Li, Jie
name: Chai, Xiaohan
name: Guo, Yongfu
name: Hu, Xuefeng
name: Kong, Weina
name: Ma, Ruiyan
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Astronomical and Space Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy

description: Oriental fruit moth (OFM) is a cosmopolitan borer pest. Adults migrate among peach, pear or apple orchards. However, the association of female oviposition with larval fitness over seasonal variation of fruit species have not been reported. This study investigated female oviposition and larval fitness during four sampling months of peach, apple and pear related with maturity. Infested fruits were investigated in three orchards. These results showed that females laid fewer eggs on apple than peach or pear in June and July, but not May and August. Fitness index of larvae on pear was lower than peach or apple in May, June and August, except for July. In June, larvae failed completely to bore into pear. The ranking of infestation ratio was peach orchard (from June to July) > pear orchard (July onward) > apple orchard (late June onward). Based on the above results, peach (June and July) and pear (July and August) were more suitable than apple (June, July and August), whereas peach (May), apple (May) and pear (May and June) were unsuitable for OFM.
From Publishers To Self-Publishing: The Disruptive Effects Of Digitalisation On The Book Industry
Creators: name: Hviid, Morten
name: Jacques, Sabine
name: Sanches, Sofia Izquierdo
Publisher: name: Zenodo
Year: 2017
Subjects: Book industry
Self-publishing
Traditional publishing
Retailers

description: This paper explores the structure of the book publishing industry post-digitalisation.  We argue that the introduction of successful e-book readers has belatedly given digitalisation the characteristics of a disruptive technology by making self-publishing a serious option for authors.  This has been supported by the entry of new types of intermediaries and the strengthening of others.  These changes have reduced the overall complexities for an author to get a book self-published.  As a result, a larger share of the surplus from the book industry is likely going to authors, explaining the significant increase in the supply of books.  The potential over-supply of books has created a new problem by making consumer search more difficult.  We argue that digitalisation has shifted the potential market failure from inadequate supply of books to asymmetric information about quality. It remains to be seen whether the market will provide appropriate intermediaries to solve the associated asymmetric information problem and, if not, what appropriate interventions should be contemplated.
High and low dietary fiber consumption and cancer risk: a comprehensive umbrella review with meta-meta-analysis involving meta-analyses of observational epidemiological studies
Creators: name: Arayici, Mehmet Emin
name: Basbinar, Yasemin
name: Ellidokuz, Hulya
Publisher: name: Taylor & Francis
Year: 2023
Subjects: Medicine
Biotechnology
Chemical Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Science Policy

description: It is a well-known fact that dietary fiber is recognized as one of the essential components of a healthy diet. The aim of this paper was to investigate the impact of dietary fiber on the incidence and mortality of various types of cancer, the current evidence in this field, and the biases of this evidence using the meta-meta-analysis method. We identified meta-analyses that particularly focused on the association between dietary fiber consumption and the risk/mortality of cancer. A structured and comprehensive computer literature search was undertaken in the electronic databases PubMed/Medline, Web of Science (WoS), and Scopus. The search yielded a total of 25 papers and 28 reports. In the pooled analysis, higher dietary fiber consumption was associated with a 22% lower cancer risk (OR = 0.78, 95% CI: 0.74-0.83, p < 0.001) and a 17% lower mortality (RR = 0.83, 95% CI: 0.78-0.90, p < 0.001). In the secondary meta-meta-analysis, it was observed that there was an inverse association between dietary fiber intake and digestive tract cancers (OR = 0.68, 95% CI: 0.62-0.76) and breast cancer (OR = 0.92, 95% CI: 0.90-0.94). Taken together, this paper suggests that promoting a high-fiber diet may be an effective strategy for the prevention and management of cancer.
Additional file 6 of Efficacy of COVID-19 mRNA vaccination in patients with autoimmune disorders: humoral and cellular immune response
Creators: name: Filippini, Federica
name: Giacomelli, Mauro
name: Bazzani, Chiara
name: Fredi, Micaela
name: Semeraro, Paolo
name: Tomasi, Cesare
name: Franceschini, Franco
name: Caruso, Arnaldo
name: Cavazzana, Ilaria
name: Giagulli, Cinzia
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 6: Supplemental figure 3. Levels of CCL2 (A), CCL8 (B), CCL5 (C) released by unstimulated cells (on the left), CD4 T cells stimulated with spike-derived peptide the different groups of patients, as indicated, after the second dose of COVID-19 vaccine. The data are shown as box plots (extremes of the box are at the bottom the first and at the top the third quartile, the inner row is the median and the upper line and lower line are the highest and lowest values). HC=Healthy Controls, ABA=abatacept, TCZ=tocilizumab, RTX=rituximab, IVIG=intravenous immunoglobulin.
Allergenicity of alternative proteins: research hotspots, new findings, evaluation strategies, regulatory status, and future trends: a bibliometric analysis
Creators: name: Li, Peipei
name: Sheng, Lina
name: Ye, Yongli
name: Wang, Jia-sheng
name: Geng, Shuxiang
name: Ning, Deli
name: Sun, Xiulan
Publisher: name: Taylor & Francis
Year: 2024
Subjects: Biochemistry
Medicine
Molecular Biology
Biotechnology
Biological Sciences not elsewhere classified
Developmental Biology
Cancer
Science Policy

description: As the world population rises, the demand for protein increases, leading to a widening gap in protein supply. There is an unprecedented interest in the development of alternative proteins, but their allergenicity has raised consumer concerns. This review aims to highlight and correlate the current research status of allergenicity studies on alternative proteins based on previously published studies. Current research keywords, hotspots and trends in alternative protein sensitization were analyzed using a mixed-method approach that combined bibliometric analysis and literature review. According to the bibliometric analysis, current research is primarily focused on food science, agriculture, and immunology. There are significant variations in the type and amount of allergens found in alternative proteins. A significant amount of research has been focused on studying plant-based proteins and the cross-reactivity of insect proteins. The allergenicity of alternative proteins has not been studied extensively or in depth. The allergenicity of other alternative proteins and the underlying mechanisms warrant further study. In addition, the lack of a standardized allergy assessment strategy calls for additional efforts by international organizations and collaborations among different countries. This review provides new research and regulatory perspectives for the safe utilization of alternative proteins in human food systems.
title: Codebook and Documentation of the Panel Study "Labour Market and Social Security" (PASS)
title: PASS 0619
titleType: AlternativeTitle
Creators: name: Berg Et Al., Marco
Publisher: name: Forschungsdatenzentrum der Bundesagentur für Arbeit (BA) im Institut für Arbeitsmarkt- und Berufsforschung (IAB)
Year: 2021

description: FDZ-Datenreporte (FDZ data reports) describe FDZ data in detail. As a result, this series of reports has a dual function: on the one hand, those using the reports can ascertain whether the data offered is suitable for their research task; on the other, the data can be used to prepare evaluations. This data report documents the data preparation of the PASS wave 13 and is based upon the twelfth wave's data report: Marco Berg, Ralph Cramer, Christian Dickmann, Reiner Gilberg, Birgit Jesske, Martin Kleudgen (all infas Institute for Applied Social Sciences), Jonas Beste, Sandra Dummert, Corinna Frodermann, Stefan Schwarz, Mark Trappmann, Sebastian Bähr, Mustafa Coban, Martin Friedrich, Stefanie Gundert, Bettina Müller, Nils Teichler, Stefanie Unger, Claudia Wenzig (all Institute for Employment Research (IAB)): Codebook and documentation of the panel Study 'Labour Market and Social Security' (PASS), Datenreport wave 12, FDZ Datenreport, 09/2019 (en), Nürnberg.
Multiscale tests for point processes and longitudinal networks
Creators: name: Jiang, Youmeng
Publisher: name: No Publisher Supplied
Year: 2024

description: We propose a new testing framework applicable to both the two-sample problem on point processes and the community detection problem on rectangular arrays of point processes, which we refer to as longitudinal networks; the latter problem is useful in situations where we observe interactions among a group of individuals over time. Our framework is based on a multiscale discretization scheme that consider not just the global null but also a collection of nulls local to small regions in the domain; in the two-sample problem, the local rejections tell us where the intensity functions differ and in the longitudinal network problem, the local rejections tell us when the community structure is most salient. We provide theoretical analysis for the two-sample problem and show that our method has minimax optimal power under a Holder continuity condition. We provide extensive simulation and real data analysis demonstrating the practicality of our proposed method. In the first chapter, we delve into the two-sample problem and the details of our testing procedure. We provide theoretical analysis for the two-sample test and show that our method has minimax optimal power.We define the concept of longitudinal networks and elucidate our approach to testing for community structure within them in the Chapter II. We outline our tests across three distinct settings: symmetric networks with homogeneous baseline rates, asymmetric networks with homogeneous baseline rates, and degree-corrected networks with heterogeneous baseline rates.For both problems, we provide extensive simulation and real data analysis demonstrating the practicality of our proposed method.
sj-pdf-1-jcb-10.1177_0271678X20924107 - Supplemental material for Hypoxia induces de novo formation of cerebral collaterals and lessens the severity of ischemic stroke
Creators: name: Zhang, Hua
name: Rzechorzek, Wojciech
name: Aghajanian, Amir
name: Faber, James E
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: Emergency Medicine
subject: Endocrinology
subject: Medicine
subject: Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: Radiology and Organ Imaging
subject: Cell Biology
subject: Biochemistry
subject: Biological Sciences not elsewhere classified
subject: Neuroscience

description: Supplemental material, sj-pdf-1-jcb-10.1177_0271678X20924107 for Hypoxia induces de novo formation of cerebral collaterals and lessens the severity of ischemic stroke by Hua Zhang, Wojciech Rzechorzek, Amir Aghajanian and James E Faber in Journal of Cerebral Blood Flow & Metabolism
sj-pdf-1-std-10.1177_0956462420918682 - Supplemental material for Homelessness among an inpatient HIV-positive cohort at a tertiary care hospital in central London
Creators: name: Venkateshwaran Sivaraj
name: Rudiger Pittrof
name: Olubanke Davies
name: Ranjababu Kulasegaram
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Supplemental material, sj-pdf-1-std-10.1177_0956462420918682 for Homelessness among an inpatient HIV-positive cohort at a tertiary care hospital in central London by Venkateshwaran Sivaraj, Rudiger Pittrof, Olubanke Davies and Ranjababu Kulasegaram in International Journal of STD & AIDS
Additional file 8 of Efficacy of COVID-19 mRNA vaccination in patients with autoimmune disorders: humoral and cellular immune response
Creators: name: Filippini, Federica
name: Giacomelli, Mauro
name: Bazzani, Chiara
name: Fredi, Micaela
name: Semeraro, Paolo
name: Tomasi, Cesare
name: Franceschini, Franco
name: Caruso, Arnaldo
name: Cavazzana, Ilaria
name: Giagulli, Cinzia
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 8: Supplemental table 3. CXCL10 and CXCL9 fold increase (between Ag1 stimulated and non stimulated cells, and Ag2 stimulated and non stimulated cells) were higher in abatacept groups compared to healthy controls. No significant difference was found in CXCL10 and CXCL9 fold increase between other groups and healthy controls.
Additional file 1 of Efficacy of COVID-19 mRNA vaccination in patients with autoimmune disorders: humoral and cellular immune response
Creators: name: Filippini, Federica
name: Giacomelli, Mauro
name: Bazzani, Chiara
name: Fredi, Micaela
name: Semeraro, Paolo
name: Tomasi, Cesare
name: Franceschini, Franco
name: Caruso, Arnaldo
name: Cavazzana, Ilaria
name: Giagulli, Cinzia
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 1: Supplemental table 1a. comparison between ABA-treated groups and healthy controls in CXCL10 levels, CXCL9 levels, IFN-γ levels, after Ag1 stimulation and Ag2 stimulation, analysed by multivariable General Linear Model. Supplemental table 1b. comparison between “high immunosuppression” cluster and “low immunosuppression” cluster of all items analysed, as showed in box-plots.
AN INTEGRATED EVALUATION OF WASTE GENERATION, STORAGE, AND DISPOSAL AT NNAMDI AZIKIWE INTERNATIONAL AIRPORT
Creators: name: Ibrahimand, Amina Zulaihat
Publisher: name: AYDEN JOURNAL
Year: 2025
Subjects: Generation, Storage, Disposal, Health Effects of Refuse, Airport.

description: The study examined the storage, disposal and health effects of refuse in Nnamdi Azikiwe International Airport Abuja. The specific objectives were to; assess the types of Refuse generated; examine the methods of storing refuse; and find out the health effects of improper refuse disposal based on gender. Cross sectional descriptive survey research design was used. The population of the study comprises of all 1, 574 workers in the airport. The sample size of this study is 383 determined using of Cohen, Manion and Morrison (2011). Simple random sampling by balloting was used to select the respondents. Questionnaire was used to collect data which validated by three (3) experts and the Cronbach alpha was 0.78. Both descriptive and inferential statistical tools were used and analyzed the collected data. For descriptive statistics, frequency, percentage, mean, and standard deviation were used. For inferential statistics, chi – square was used and set the significant level at (5%) (p ≤ 0.05). All the results were presented in tables and calculated with

aid of Statistical Package for Social Science (SPSS). The finding indicates that more than half (68.9%) of the respondents are generating accumulated rags waste, (64.3%) generating Nylon and polythene bags waste, and (57.5%) generating waste papers while (44.1%) are generating food waste and fruits peel. Finding also shows that garbage bags (mean = 3.10), polythene bags (mean = 3.03) and, drums (mean = 2.74) were the methods of refuse storage recorded the higher mean value greater than the criterion mean (2.50) which concluded as agreed. Finally, it also revealed that Female (89.2%) are more than male (81.2%) agreed toxic is one of the health effects; also (91.4%) highly agreed then male (71.3%) for contamination of land, air and water, but for  creation of unsanitary conditions effect, female (88.7%) highly agreed than male (71.8%); in environmental pollution; female (86.0%) agreed than male (70.7%); female (81.7%) highly agreed than male (69.1%) that outbreaks of vector-borne disease is one of the health effects of improper refuse disposal. It was recommended that; Health campaign on better waste disposal methods and educating the both passengers and staff of the airport in order to appreciate the health problems associated with indiscriminate waste disposal and the enforcement of sanitation laws by the appropriate authorities.
Digital Sequence Information (DSI) data governance practices to support benefit-sharing and science
Creators: name: Raposo, Débora S.
name: Orozco, Pablo
name: McCartney, Ann
name: Freitag, Jens
name: Rouard, Mathieu
name: Ebert, Barbara
name: Scholz, Amber H.
Publisher: name: Zenodo
Year: 2024
Subjects: DSI
Digital Sequence Information
CBD
Convention on Biological Diversity
GBF
Global Biodiversity Framework
Benefit sharing
Multilateral mechanism
COP 15
COP 16
Science Policy
Biodiversity
Data Governance
Open access
FAIR principles
CARE principles

description: Parties to the Convention on Biological Diversity (CBD) are developing a multilateral mechanism including a global fund for benefit-sharing from the use of digital sequence information (DSI) on genetic resources.

Key issues for the multilateral mechanism still need to be agreed upon, like DSI access and use, triggers for the mechanism, tensions between the current “open” paradigm of DSI in public databases and the FAIR and CARE principles, DSI provenance information, and the role of indicators and monitoring tools. 

Future decisions for the mechanism could significantly impact the various formal and informal DSI governance rules and practices in the databases, scientific funders, journals, and other organizations, as well as national regulations. 

WHAT THIS BRIEF WILL DO:

Identify the status quo of the various formal and informal DSI governance around the globe.

Describe different types of DSI "users". 

Discuss tensions between Parties, stakeholders, and rightsholders that have implications for DSI governance. 

Make recommendations from an academic scientific perspective on the possible changes to the status quo of DSI governance.