cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Neutrino Fluence from Gamma-Ray Bursts: Off-Axis View of Structured Jets
Creators: name: Ahlers, Markus
name: Halser, Lea
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: High Energy Physics - Experiment (hep-ex)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We investigate the expected high-energy neutrino fluence from internal shocks produced in the relativistic outflow of gamma-ray bursts. Previous model predictions have primarily focussed on on-axis observations of uniform jets. Here we present a generalization to account for arbitrary viewing angles and jet structures. Based on this formalism, we provide an improved scaling relation that expresses off-axis neutrino fluences in terms of on-axis model predictions. We also find that the neutrino fluence from structured jets can exhibit a strong angular dependence relative to that of gamma-rays and can be far more extended. We examine this behavior in detail for the recent short gamma-ray burst GRB 170817A observed in coincidence with the gravitational wave event GW170817.
description: version published in MNRAS 490, 4935-4943 (2019)
GreenDIGIT: Project and Initiative to Lower environmental Impact of the Future Digital Research Infrastructures
Creators: name: Demchenko, Yuri
Publisher: name: Zenodo
Year: 2024

description: GreenDIGIT brings together 4 major distributed Digital Infrastructures at different lifecycle stages, EGI, SLICES, SoBigData, EBRAINS, to tackle the challenge of environmental impact reduction with the ambition to provide solutions that are reusable across the whole spectrum of digital services on the ESFRI landscape, and play a role model. GreenDIGIT will capture good practices and existing solutions and will develop new technologies and solutions for all aspects of the digital continuum: from service provisioning to monitoring, job scheduling, resources allocation, architecture, workload and Open Science practices, task execution, storage, and use of green energy. GreenDIGIT will deliver these solutions as building blocks, with a reference architecture and guidelines for RIs to lower their environmental footprint. 

GreenDIGIT will address the problem/challenge of achieving sustainability and reduced environmental impact of the current and future European Research Infrastructures by addressing a complex of tasks which together will facilitate evolving the European Research Area as an ecosystem with reduced environmental and climate footprint, which impact is measurable and controllable. To this aim, a specific architecture covering the entire continuum of resources (IoT, Far-Edge, Edge, Cloud) as well as the underlying network is established, covering horizontally all the different aspects that RIs deal with (data, storage, resource consumption). Different levels of data processing (monitoring data & experiment workflow data) will be optimized toward enabling the most efficient possible use of resources within the RIs. The ultimate goal is to optimize the execution speed of workloads, optimize the efficiency of algorithms running within the RIs, optimise the management configuration, and the overall performance, while reducing energy consumption and maximise the ratio of green energy within the use. In the figure below, we present the high-level architecture of the GreenDIGIT framework.
Additional file 1 of Exploring expectations and perceptions of different manual therapy techniques in chronic low back pain: a qualitative study
Creators: name: A. Plank
name: A. Rushton
name: Y. Ping
name: R. Mei
name: D. Falla
name: N. R. Heneghan
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1.
SBF-SEM- Supplementary Figures from Helical fibrillar microstructure of tendon using serial block-face scanning electron microscopy and a mechanical model for interfibrillar load transfer
Creators: name: Safa, Babak N.
name: Peloquin, John M.
name: Natriello, Jessica R.
name: Caplan, Jeffrey L.
name: Elliott, Dawn M.
Publisher: name: The Royal Society
Year: 2019
Subjects: subject: 110601 Biomechanics
subject: FOS: Health sciences
subject: 90399 Biomedical Engineering not elsewhere classified
subject: FOS: Medical engineering

description: This supplementary document includes three figures as additional supporting material.
Winding strings and AdS_3 black holes
Creators: name: Troost, Jan
Publisher: name: arXiv
Year: 2002
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We start a systematic study of string theory in AdS_3 black hole backgrounds. Firstly, we analyse in detail the geodesic structure of the BTZ black hole, including spacelike geodesics. Secondly, we study the spectrum for massive and massless scalar fields, paying particular attention to the connection between Sl(2,R) subgroups, the theory of special functions and global properties of the BTZ black holes. We construct classical strings that wind the black holes. Finally, we apply the general formalism to the vacuum black hole background, and formulate the boundary spacetime Virasoro algebra in terms of worldsheet operators. We moreover establish the link between a proposal for a ghost free spectrum for Sl(2,R) string propagation and the massless black hole background, thereby claryfing aspects of the AdS3/CFT correspondence.
description: 24 pages, 1 figure, v2: references added, JHEP version
Supplementary document for Continuous variable spin-orbit total angular momentum entanglement on higher-order Poincaré sphere - 6318210.pdf
Creators: name: Guo, Hui
name: Liu, Na
name: Sun, Hengxin
name: Liu, Kui
name: Gao, Jiangrui
Publisher: name: Optica Publishing Group
Year: 2023
Subjects: Uncategorized

description: The description of the experimental scheme details and the power spectrum density data.
Craspedorrhynchus macrocephalus
Creators: name: Ilieva, Mihaela
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Psocodea
Philopteridae
Craspedorrhynchus
Craspedorrhynchus macrocephalus

description: Craspedorrhynchus macrocephalus (Nitzsch [In Giebel], 1874)
 Report: [1] Touleshkov (1957).
 Host: Haliaeetus albicilla (L.) [1].
 Distribution in Bulgaria: Belene, Venelin (Varna Region) [1].
description: Published as part of Ilieva, Mihaela, 2009, Checklist of the chewing lice (Insecta: Phthiraptera) from wild birds in Bulgaria, pp. 1-66 in Zootaxa 2138 (1) on page 28, DOI: 10.11646/zootaxa.2138.1.1, http://zenodo.org/record/5314302
Additional file 2 of Inter-species functional compatibility of the Theobroma cacao and Arabidopsis FT orthologs: 90 million years of functional conservation of meristem identity genes
Creators: name: S. F. Prewitt
name: A. Shalit-Kaneh
name: S. N. Maximova
name: Guiltinan, M. J.
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 2: Table S2. BLASTp results using AtFT, AtTFL1 and ATC as queries against the T. cacao Matina1–6 v1.1 predicted proteome.
A Simple Model for the BFKL-DGLAP Transition in Deep Inelastic Scattering
Creators: name: Gustafson, Gösta
name: Miu, Gabriela
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: A simple model is presented, which interpolates between the DGLAP and BFKL regimes in deep inelastic e-p scattering. The model is based on the CCFM and LDC models, and it is simple enough to provide an intuitive picture of the transition region between the two domains. Results are presented for both fixed and running coupling; for fixed coupling the transition between the domains occurs at a constant ratio between ln((k_T)^2) and ln(1/x), while for a running coupling it occurs for constant ratio between ln(ln((k_T)^2)) and ln(1/x).
description: 1+14 pages, 6 figures
Biological sex classification with structural MRI data shows increased misclassification in transgender women
Creators: name: Flint, Claas
name: Förster, Katharina
name: Koser, Sophie A.
name: Konrad, Carsten
name: Zwitserlood, Pienie
name: Berger, Klaus
name: Hermesdorf, Marco
name: Kircher, Tilo
name: Nenadic, Igor
name: Krug, Axel
name: Baune, Bernhard T.
name: Dohm, Katharina
name: Redlich, Ronny
name: Opel, Nils
name: Arolt, Volker
name: Hahn, Tim
name: Jiang, Xiaoyi
name: Dannlowski, Udo
name: Grotegerd, Dominik
Publisher: name: arXiv
Year: 2019
Subjects: subject: Neurons and Cognition (q-bio.NC)
subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Biological sciences
subject: FOS: Computer and information sciences

description: Transgender individuals (TIs) show brain structural alterations that differ from their biological sex as well as their perceived gender. To substantiate evidence that the brain structure of TIs differs from male and female, we use a combined multivariate and univariate approach. Gray matter segments resulting from voxel-based morphometry preprocessing of $N = 1753$ cisgender (CG) healthy participants were used to train ($N=1402$) and validate (20 % hold-out; $N = 351$) a support-vector machine classifying the biological sex. As a second validation, we classified $N = 1104$ patients with depression. A third validation was performed using the matched CG sample of the transgender women (TWs) application-sample. Subsequently, the classifier was applied to $N = 26$ TWs. Finally, we compared brain volumes of CG-men, women and TW-pre/post treatment (cross-sex hormone treatment) in a univariate analysis controlling for sexual orientation, age and total brain volume. The application of our biological sex classifier to the transgender sample resulted in a significantly lower true positive rate (TPR) (TPR-male = 56.0 %). The TPR did not differ between CG-individuals with (TPR-male = 86.9 %) and without depression (TPR-male = 88.5 %). The univariate analysis of the transgender application-sample revealed that TW-pre/post treatment show brain structural differences from CG-women and CG-men in the putamen and insula, as well as the whole-brain analysis. Our results support the hypothesis that brain structure in TW differs from brain structure of their biological sex (male) as well as their perceived gender (female). This finding substantiates evidence that TIs show specific brain structural alterations leading to a different pattern of brain structure than CG-individuals.
description: Content adapted to the publication at Neuropsychopharmacology
Effects of Dynamical Quarks in UKQCD Simulations
Creators: name: Allton, Chris
Publisher: name: arXiv
Year: 2002
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: Recent results from the UKQCD Collaboration's dynamical simulations are presented. The main feature of these ensembles is that they have a fixed lattice spacing and volume, but varying sea quark mass from infinite (corresponding to the quenched simulation) down to roughly that of the strange quark mass. The main aim of this work is to uncover dynamical quark effects from these ``matched'' ensembles. We obtain some evidence of dynamical quark effects in the static quark potential with less effects in the hadronic spectrum.
description: Invited paper presented at the Workshop on Lattice Hadron Physics, July 2001, Cairns, Australia. 7 pages. Uses espcrc2.sty (included)
Four dimensional R^4 superinvariants through gauge completion
Creators: name: Moura, Filipe
Publisher: name: arXiv
Year: 2002
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We fully compute the N=1 supersymmetrization of the fourth power of the Weyl tensor in d=4 x-space with the auxiliary fields. In a previous paper, we showed that their elimination requires an infinite number of terms; we explicitely compute those terms to order κ^4 (three loop). We also write, in superspace notation, all the possible N=1 actions, in four dimensions, that contain pure R^4 terms (with coupling constants). We explicitely write these actions in terms of the θcomponents of the chiral density εand the supergravity superfields R, G_m, W_{ABC}. Using the method of gauge completion, we compute the necessary θcomponents which allow us to write these actions in x-space. We discuss under which circumstances can these extra R^4 correction terms be reabsorbed in the pure supergravity action, and their relevance to the quantum supergravity/string theory effective actions.
description: 20 pages, no figures. Sec. 3 clarified; typos corrected
Craspedorrhynchus melittoscopus
Creators: name: Ilieva, Mihaela
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Psocodea
Philopteridae
Craspedorrhynchus
Craspedorrhynchus melittoscopus

description: Craspedorrhynchus melittoscopus (Nitzsch [In Giebel], 1874)
 Report: [1] Touleshkov (1957).
 Host: Pernis apivorus (L.) [1].
 Distribution in Bulgaria: Belene, Venelin (Varna Region) [1].
description: Published as part of Ilieva, Mihaela, 2009, Checklist of the chewing lice (Insecta: Phthiraptera) from wild birds in Bulgaria, pp. 1-66 in Zootaxa 2138 (1) on page 28, DOI: 10.11646/zootaxa.2138.1.1, http://zenodo.org/record/5314302
Non-Hermitian Topological Metamaterials with Odd Elasticity
Creators: name: Zhou, Di
name: Zhang, Junyi
Publisher: name: arXiv
Year: 2019
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We establish non-Hermitian topological mechanics in one dimensional (1D) and two dimensional (2D) lattices consisting of mass points connected by meta-beams that lead to odd elasticity. Extended from the "non-Hermitian skin effect" in 1D systems, we demonstrate this effect in 2D lattices in which bulk elastic waves exponentially localize in both lattice directions. We clarify a proper definition of Berry phase in non-Hermitian systems, with which we characterize the lattice topology and show the emergence of topological modes on lattice boundaries. The eigenfrequencies of topological modes are complex due to the breaking of $\mathcal{PT}$-symmetry and the excitations could exponentially grow in time in the damped regime. Besides the bulk modes, additional localized modes arise in the bulk band and they are easily affected by perturbations. These distinguishing features may manifest themselves in various active materials and biological systems.
description: 15 pages, 3 figures
Magnetization Plateaux in Random Frustrated S=1/2 Heisenberg Chains
Creators: name: Hida, Kazuo
Publisher: name: arXiv
Year: 2002
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: The $S=1/2$ frustrated Heisenberg chains with bond alternation is known to exhibit a magnetization plateau at half of the saturation magnetization $\Ms$ accompanied by the spontanuous translational symmetry breakdown. The effect of randomness on the magnetization process of this model is investigated. First we consider the mixture of the two kinds of chains both of which possess the $\Ms/2$-plateau in the common interval of the magnetization field. The plateau at $\Ms/2$ is found to vanish immediately if the randomness is switched on in agreement with Totsuka's prediction. The small plateau also appears near the saturation field due to the localization of inverted spins around the minority bond. On the other hand, if the stronger bond is replaced by the ferromagnetic bonds randomly, the randomness induced fractional plateau appears as in the nonfrustrated case. The plateau at $\Ms/2$ does not simply vanish but shifts and splits into two smaller plateaux. The magnetization on this plateau varies nonlinearly with $1-p$. The physical origin of this behavior is explained based on the strong coupling picture.
description: 5 pages, 9 figures, references corrected and added
Equilibrium radiation in a plasma medium with spatial and frequency dispersion
Creators: name: Trigger, Sergey A.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Plasma Physics (physics.plasm-ph)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: Examination of equilibrium radiation in plasma media shows that the spectral energy distribution of such radiation is different from the Planck equilibrium radiation. Using the approach of quantum electrodynamics the general relation for the spectral energy density of equilibrium radiation in a system of charged particles is found. The obtained result takes into account the influence of plasma on equilibrium radiation through the explicit transverse dielectric permittivity which takes into account spatial and frequency dispersion, as well as the finite collisional damping. For the limiting case of an infinitesimal damping the result coincides with the known expression.
description: 6 pages, 0 figures
CA-SBA-785: Archaeological site record for CA-SBA-785
Creators: name: Kekich, Jessica
Year: 2025
Subjects: subject: Santa Barbara (County)
valueUri: https://core.tdar.org/browse/geographic-keyword/3486/santa-barbara-county
subject: Vandenberg Air Force Base (VAFB)
valueUri: https://core.tdar.org/browse/geographic-keyword/85469/vandenberg-air-force-base-vafb
subject: Vandenberg Space Force Base (VSFB)
valueUri: https://core.tdar.org/browse/geographic-keyword/85584/vandenberg-space-force-base-vsfb
subject: California (State / Territory)
valueUri: https://core.tdar.org/browse/geographic-keyword/1484/california-state-territory

description: This document is the archaeological site record for CA-SBA-785.
The Cosmological Constant, False Vacua, and Axions
Creators: name: Barr, S. M.
name: Seckel, D.
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: It is suggested that the true ground state of the world has exactly vanishing vacuum energy and that the cosmological constant that seems to have been observed is due to our region of the universe being stuck in a false vacuum, whose energy is split from the true vacuum by non-renormalizable operators that are suppressed by powers of the Planck scale. It is shown that conventional invisible axion models typically have the features needed to realize this possibility. In invisible axion models the same field and the same potential can explain both the cosmological constant (or dark energy) and the dark matter. It is also shown that the idea can be realized in non-axion models, an example of which is given having $Λ= M_W^7/M_{Pl}^3$, which accords well with the observed value.
description: 17 pages, LaTex
Additional file 2 of Exploring expectations and perceptions of different manual therapy techniques in chronic low back pain: a qualitative study
Creators: name: A. Plank
name: A. Rushton
name: Y. Ping
name: R. Mei
name: D. Falla
name: N. R. Heneghan
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 2.
On The Stability of The Non-Newtonian Boundary-layer Flow Over a Rotating Sphere
Creators: name: Egfayer, Hawa M. I.
Publisher: name: University of Leicester
Year: 2019
Subjects: Uncategorized

description: The majority of this work is concerned with the local-stability of incompressible non-Newtonian boundary-layer flows over rotating spheres. Convective stability given by the power-law fluids is considered for fluids that adhere to a non-Newtonian governing viscosity relationship. The velocity distribution of the base flow is described by ordinary differential equations with the power-law flow index as the only parameter. The laminar boundary layer flow is studied by extending the perturbation method suggested by Howarth and used by Banks. The laminar mean velocity profiles are obtained by solving the resulting ordinary differential equations assuming that the flow is axisymmetric and time independent. Having the base flow solutions, we investigate the convective instabilities associated with flows in the limit of large Reynolds number inside the threedimensional boundary-layer. The local rotating sphere analyses are conducted at various latitudes from the axis of rotation (θ). A linear stability analysis is conducted using the Chebyshev collocation method. Extensive computation results are given for the flow index 0.6 ≤ n ≤ 1.0. Akin to previous Newtonian studies at sphere latitudes θ = 10◦−70◦ in ten degrees increments, it is found that there exists two primary modes of instability; the upper-branch Type I modes (cross-flow) and the lower-branch Type II modes (streamlinecurvature). The results of the convective instabilities are presented in terms of neutral curves and growth rates. The predictions of Reynolds number, vortex angle and vortex speed at the onset of convective instability when the power-law index n = 1 are consistent with previous Newtonian studies. Our predictions and neutral curves for convective instability of the power-law boundary layer on rotating spheres approach those of the rotating disk as we approach the pole. Roughly speaking, our findings reveal that shear-thinning power-law fluids over rotating spheres have a universal stabilising effect.
Determining topological order from infinite projected entangled pair states
Creators: name: Francuz, Anna
name: Dziarmaga, Jacek
name: Vidal, Guifre
name: Cincio, Lukasz
Publisher: name: arXiv
Year: 2019
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We present a method of extracting information about the topological order from the ground state of a strongly correlated two-dimensional system computed with the infinite projected entangled pair state (iPEPS). For topologically ordered systems, the iPEPS wrapped on a torus becomes a superposition of degenerate, locally indistinguishable ground states. Projectors in the form of infinite matrix product operators (iMPO) onto states with well-defined anyon flux are used to compute topological $S$ and $T$ matrices (encoding mutual- and self-statistics of emergent anyons). The algorithm is shown to be robust against a perturbation driving string-net toric code across a phase transition to a ferromagnetic phase. Our approach provides accurate results near quantum phase transition, where the correlation length is prohibitively large for other numerical methods. Moreover, we used numerically optimized iPEPS describing the ground state of the Kitaev honeycomb model in the toric code phase and obtained topological data in excellent agreement with theoretical prediction.
description: 4+6 pages, 12 figures, published version
The role of CwlM in peptidoglycan synthesis and remodelling in Mycobacteria
Creators: name: Baleegh A. Kadhim
Publisher: name: University of Leicester
Year: 2019
Subjects: Uncategorized

description: Tuberculosis remains a major global health problem, claiming around 1.5 million lives annually, and its causative agent Mycobacterium tuberculosis (Mtb) can persist in humans for decades. Mtb has a complex cell wall, biosynthesis and remodelling of which is controlled by serine/threonine protein kinase signalling. Protein kinase B (PknB) is indispensable for mycobacterial growth and it phosphorylates CwlM, a predicted N-acetylmuramyl-L-alanine amidase. However, recent findings suggest that CwlM has a non-enzymatic function and regulates biosynthesis of peptidoglycan precursors via activation of MurA.This study was focused on investigation of the enzymatic and non-enzymatic roles of CwlM, its localization in mycobacterial cells and interactions with other proteins.Recombinant Mtb CwlM and its forms (mutated and truncated) were purified and used for investigation of peptidoglycan-cleaving activity by application of zymogram and digestion of FITC-labeled PG. Full-length CwlM showed no detectable PG-cleaving activity, however a shorter CwlM form corresponding to the predicted amidase domain was active in both assays. The site directed mutagenesis of the catalytic residue D339A completely abolished the PG-activity. PknB-mediated phosphorylation of CwlM or phosphomimetic mutations had no effect on peptidoglycan cleaving activity, however improved CwlM stability.CwlM was found in the cytoplasmic and membrane fractions isolated from growing mycobacteria. Moreover, the phosphorylated CwlM localised in the cytoplasm, and non-phosphorylated CwlM was associated with the plasma membrane. CwlM was not detectable in cell wall and culture filtrate preparations.Immunoprecipitation assays using CwlM-IgG-sepharose confirmed that phosphorylated CwlM interacted with FhaA, a fork-head-associated domain protein, whereas non-phosphorylated CwlM bound to the intracellular domain of MurJICD (MviN), a proposed Lipid II flippase.A model of CwlM-mediated regulation of peptidoglycan biosynthesis was proposed based on the findings of this study and previously published observations.
Craspedorrhynchus nipalensis Eichler 1944
Creators: name: Ilieva, Mihaela
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Psocodea
Philopteridae
Craspedorrhynchus
Craspedorrhynchus nipalensis

description: Craspedorrhynchus nipalensis Eichler, 1944
 Report: [1] Touleshkov (1957).
 Host: Aquila nipalensis Hodgson * [1].
 Distribution in Bulgaria: Gorno Ezerovo (Burgas Region) [1].
description: Published as part of Ilieva, Mihaela, 2009, Checklist of the chewing lice (Insecta: Phthiraptera) from wild birds in Bulgaria, pp. 1-66 in Zootaxa 2138 (1) on page 28, DOI: 10.11646/zootaxa.2138.1.1, http://zenodo.org/record/5314302
Cluster reducibility of multiquark operators
Creators: name: Lucha, Wolfgang
name: Melikhov, Dmitri
name: Sazdjian, Hagop
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: It is shown that the multiquark gauge-invariant operators can, in general, be decomposed into combinations of products of ordinary hadronic operators, exhibiting their cluster reducibility. The latter property inhibits the formation of completely compact multiquark bound states. Multiquark operators still play a crucial role in the description of exotic states in regions of configuration space where the hadronic clusters are close to each other. Our proof gives a foundation for a unified viewpoint, where the multiquark-type and the molecular-type approaches play complementary roles, at the gauge-invariant nonlocal operator level.
description: 16 pages, 12 figures. A sentence has been changed in the abstract. A few minor changes in the main text
Natural Twin Neutralino Dark Matter
Creators: name: Badziak, Marcin
name: di Cortona, Giovanni Grilli
name: Harigaya, Keisuke
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Supersymmetric Twin Higgs models have a discrete symmetry for which each Standard Model particle and its supersymmetric partner have a corresponding state that transforms under a mirror Standard Model gauge group. This framework is able to accommodate the non-discovery of new particles at the LHC with the naturalness of the electroweak scale. We point out that supersymmetric Twin Higgs models also provide a natural dark matter candidate. We investigate the possibility that a twin bino-like state is the Lightest Supersymmetric Particle and find that its freeze-out abundance can explain the observed dark matter abundance without fine-tuning the mass spectrum of the theory. Most of the viable parameter space can be probed by future dark matter direct detection experiments and the LHC searches for staus and higgsinos which may involve displaced vertices.
description: 6 pages, 3 figures + supplemental material
Craspedorrhynchus nisi
Creators: name: Ilieva, Mihaela
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Psocodea
Philopteridae
Craspedorrhynchus
Craspedorrhynchus nisi

description: Craspedorrhynchus nisi (Denny, 1842)
 Report: [1] Touleshkov (1957).
 Host: Accipiter nisus (L.) [1].
 Distribution in Bulgaria: Sofia [1].
description: Published as part of Ilieva, Mihaela, 2009, Checklist of the chewing lice (Insecta: Phthiraptera) from wild birds in Bulgaria, pp. 1-66 in Zootaxa 2138 (1) on page 28, DOI: 10.11646/zootaxa.2138.1.1, http://zenodo.org/record/5314302
Additional file 1 of Does posterior configuration have similar strength as parallel configuration for treating comminuted distal humerus fractures? A cadaveric biomechanical study
Creators: name: Chien-An Shih
name: Fa-Chuan Kuan
name: Kai-Lan Hsu
name: Chih-Kai Hong
name: Lin, Cheng-Li
name: Yeh, Ming-Long
name: Su, Wei-Ren
Publisher: name: figshare
Year: 2021
Subjects: Space Science
Medicine
Cell Biology
Developmental Biology

description: Additional file 1: Supplementary Table 1. Post-hoc Mann-Whitney test between the parallel, Y, and posterior two plating constructs (three tests for pairwise comparisons of 3 groups) for different biomechanical parameters after cyclic loading.
Additional file 3 of Exploring expectations and perceptions of different manual therapy techniques in chronic low back pain: a qualitative study
Creators: name: A. Plank
name: A. Rushton
name: Y. Ping
name: R. Mei
name: D. Falla
name: N. R. Heneghan
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 3.
Craspedorrhynchus platystomus
Creators: name: Ilieva, Mihaela
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Psocodea
Philopteridae
Craspedorrhynchus
Craspedorrhynchus platystomus

description: Craspedorrhynchus platystomus (Burmeister, 1838)
 Report: [1] Touleshkov (1957).
 Host: Buteo buteo (L.) [1].
 Distribution in Bulgaria: Sofia Zoo, Sofia, Sofia Region, Chelopechene (Sofia Region), Birimirci (Sofia) [1].
description: Published as part of Ilieva, Mihaela, 2009, Checklist of the chewing lice (Insecta: Phthiraptera) from wild birds in Bulgaria, pp. 1-66 in Zootaxa 2138 (1) on page 28, DOI: 10.11646/zootaxa.2138.1.1, http://zenodo.org/record/5314302
Biological Emissions and North-South Politics
Creators: name: Drennen, Thomas
name: Chapman, Duane
name: Drennen, Thomas
name: Chapman, Duane
Publisher: name: Unknown
Year: 1991
Subjects: Environmental Economics and Policy
Livestock Production/Industries

description: Emissions of methane from bovine animals have been estimated elsewhere at approximately 60 million tons per year, 15% of global methane releases. This estimate is misleading for two reasons: it ignores the differences in atmospheric residence time between carbon dioxide and methane, and it overlooks the biological and chemical cycling that occurs. The result is an overemphasis of the role of this methane as a greenhouse gas. This is demonstrated by showing the carbon withdrawal and emission cycle for a representation of the one billion global livestock animals. In terms of cost effectiveness, this method shows energy efficiency and fossil fuel switching to be more efficient policies than biological methane reduction. Finally, implications for negotiations of climate change accords are discussed.
Renormalization of the Fayet-Iliopoulos Term in Softly Broken SUSY Gauge Theories
Creators: name: Kazakov, D. I.
name: Velizhanin, V. N.
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: It is shown that renormalization of the Fayet-Iliopoulos term in a softly broken SUSY gauge theory, in full analogy with all the other soft terms renormalizations, is completely defined in a rigid or an unbroken theory. However, contrary to the other soft renormalizations, there is no simple differential operator that acts on the renormalization functions of a rigid theory and allows one to get the renormalization of the F-I term. One needs an analysis of the superfield diagrams and some additional diagram calculations in components. The method is illustrated by the four loop calculation of some part of renormalization proportional to the soft scalar masses and the soft triple couplings.
description: Latex2e, 14 pages, uses axodraw.sty. References added
TF3P: Three-dimensional Force Fields Fingerprint Learned by Deep Capsular Network
Creators: name: Wang, Yanxing
name: Hu, Jianxing
name: Lai, Junyong
name: Li, Yibo
name: Jin, Hongwei
name: Zhang, Lihe
name: Zhang, Liangren
name: Liu, Zhenming
Publisher: name: arXiv
Year: 2019
Subjects: subject: Quantitative Methods (q-bio.QM)
subject: Machine Learning (cs.LG)
subject: Biomolecules (q-bio.BM)
subject: FOS: Biological sciences
subject: FOS: Computer and information sciences

description: Molecular fingerprints are the workhorse in ligand-based drug discovery. In recent years, an increasing number of research papers reported fascinating results on using deep neural networks to learn 2D molecular representations as fingerprints. It is anticipated that the integration of deep learning would also contribute to the prosperity of 3D fingerprints. Here, we unprecedentedly introduce deep learning into 3D small molecule fingerprints, presenting a new one we termed as the three-dimensional force fields fingerprint (TF3P). TF3P is learned by a deep capsular network whose training is in no need of labeled datasets for specific predictive tasks. TF3P can encode the 3D force fields information of molecules and demonstrates the stronger ability to capture 3D structural changes, to recognize molecules alike in 3D but not in 2D, and to identify similar targets inaccessible by other 2D or 3D fingerprints based on only ligands similarity. Furthermore, TF3P is compatible with both statistical models (e.g. similarity ensemble approach) and machine learning models. Altogether, we report TF3P as a new 3D small molecule fingerprint with a promising future in ligand-based drug discovery. All codes are written in Python and available at https://github.com/canisw/tf3p.
Additional file 3 of Inter-species functional compatibility of the Theobroma cacao and Arabidopsis FT orthologs: 90 million years of functional conservation of meristem identity genes
Creators: name: S. F. Prewitt
name: A. Shalit-Kaneh
name: S. N. Maximova
name: Guiltinan, M. J.
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 3: Table S3. CETS proteins from moss (Physcomiterella patens), Arabidopsis, tomato (Solanum lycoperscium), and cotton (Gossypium hirsutum).
Speaking Stata: Fun and fluency with functions
Creators: name: Cox, Nicholas J.
name: Cox, Nicholas J.
Publisher: name: Unknown
Year: 2011
Subjects: subject: Research Methods/ Statistical Methods
subject: functions
subject: numeric
subject: string

description: Functions are the unsung heroes of Stata. This column is a tour of functions that might easily be missed or underestimated, with a potpourri of tips, tricks, and examples for a wide range of basic problems.
Additional file 4 of Exploring expectations and perceptions of different manual therapy techniques in chronic low back pain: a qualitative study
Creators: name: A. Plank
name: A. Rushton
name: Y. Ping
name: R. Mei
name: D. Falla
name: N. R. Heneghan
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 4.
The phase diagram of QCD with two and four flavors: results with HYP fermions
Creators: name: Hasenfratz, A.
name: Knechtli, F.
Publisher: name: arXiv
Year: 2002
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We study the finite temperature phase transition of four and two flavor staggered fermions with hypercubic smeared link actions. These preliminary studies suggest that the improved flavor symmetry of the fermionic action can have a significant effect on the finite temperature phase diagram.
description: 3 pages, 4 figures, Lattice2001(hightemp)
nIoVe's web site
Creators: name: Soukoulia, A.
name: Kouri, T.
Publisher: name: Zenodo
Year: 2019

description: The document is a deliverable of the nIoVe project as part of Work Package 8:Dissemination, Exploitation & Standardization, Task 8.1 Communication & Dissemination Activities. The purpose of the deliverable is to provide an overview of the project’s website,its design and functionalities.The website was designed and developed by SEEMS with the support of all members of the Consortium. The website was designed in such a way as to ensure maximum usability,accessibility and consistency. The main goal is the constant update of all identified target groups regarding the project’s results and achievements.
Covert symmetries in the neutrino mass matrix
Creators: name: Björkeroth, Fredrik
name: Di Luzio, Luca
name: Mescia, Federico
name: Nardi, Enrico
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The flavour neutrino puzzle is often addressed by considering neutrino mass matrices $m$ with a certain number of vanishing entries ($m_{ij}=0$ for some values of the indices), since a reduction in the number of free parameters increases the predictive power. Symmetries that can enforce textures zero can also enforce a more general type of conditions $f(m_{ij})=0$ with $f$ some function of the matrix elements $m_{ij}$. In this case $m$ can have all entries non-vanishing with no reduction in its predictive power. We classify all generation-dependent $U(1)$ symmetries which, in the presence of two leptonic Higgs doublets, can reduce the number of independent high-energy parameters of type-I seesaw to the minimum number compatible with non-vanishing neutrino mixings and CP violation. These symmetries are broken above the scale where the effective operator is generated and can thus remain covert, in the sense that no explicit evidence of the symmetry can be read off the neutrino mass matrix, and different symmetries can give rise to the same low-energy structure. We find that only two cases are viable: one yields a structure with two zero-textures already considered in the literature, the other has no zero-textures and has never been considered before. It predicts normal ordering, a lightest neutrino mass $ \sim 10$ meV, a Dirac phase $δ\sim \frac{3π}{2}$ and definite values for the Majorana phases.
description: 23 pages, 2 figures. Accepted for publication in JHEP
Additional file 1: of Comparison of reprogramming factor targets reveals both species-specific and conserved mechanisms in early iPSC reprogramming
Creators: name: Fu, Kai
name: Chronis, Constantinos
name: Soufi, Abdenour
name: Bonora, Giancarlo
name: Edwards, Miguel
name: Smale, Stephen
name: Zaret, Kenneth
name: Plath, Kathrin
name: Pellegrini, Matteo
Publisher: name: figshare
Year: 2018
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Computational Biology

description: Additional analyses including further supporting materials for the major findings in the manuscript. (PDF 3330 kb)
Figure S4: Generation of Crmp2S517A mice lacking O-GlcNAcylation site. from Loss of CRMP2 O-GlcNAcylation leads to reduced novel object recognition performance in mice
Creators: name: Villo Muha
name: Williamson, Ritchie
name: Hills, Rachel
name: McNeilly, Alison D.
name: McWilliams, Thomas G.
name: Alonso, Jana
name: Schimpl, Marianne
name: Aneika C. Leney
name: Heck, Albert J. R.
name: Sutherland, Calum
name: Read, Kevin D.
name: McCrimmon, Rory J.
name: Brooks, Simon P.
name: Aalten, Daan M. F. Van
Publisher: name: The Royal Society
Year: 2019
Subjects: Molecular Biology

description: Figure S4: Generation of Crmp2S517A mice lacking O-GlcNAcylation site. (a) Schematic representation of the Crmp2S517A transgene targeting exon 12-14 in the Crmp2 gene used to generate Crmp2S517A mice. Recombinants, encoding FRT flanked puromycin resistance gene, were isolated. Transgenic progenies were crossed with Flp deleter (C57BL/6-Tg(CAG-Flpe)2 Arte) mice to eliminate the puromycin resistance cassette.
Additional file of Stand-level biomass models for predicting C stock for the main Spanish pine species
Creators: name: Aguirre, Ana
name: Río, Miren Del
name: Ruiz-Peinado, Ricardo
name: Condés, Sonia
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Plant Biology

description: Additional file of Stand-level biomass models for predicting C stock for the main Spanish pine species
Anomalous transport in a topological Wannier-Stark ladder
Creators: name: Kim, Kun Woo
name: Andreanov, Alexei
name: Flach, Sergej
Publisher: name: arXiv
Year: 2019
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Other Condensed Matter (cond-mat.other)
subject: FOS: Physical sciences

description: A dc (e.g. electric) field with commensurate lattice direction turns a single particle band structure in $d=3$ dimensions into an infinite set of equally spaced irreducible $(d-1)=2$-dimensional Wannier-Stark (WS) band structures that are spatially localized along the field direction. Particle transport is expected to be suppressed once the WS bands are gapped in energy. The topological character of the irreducible band structure leads to one-dimensional sets of boundary states which fill the energy gaps. As a result, eigenmodes are smoothly connected in energy and space and yield anomalous particle transport throughout the ladder. The number of chiral boundary modes can be tuned by the dc field strength and manifests through the distribution of dissipated energy and spatial motion, and the temperature dependence of angular momentum carried by particles.
description: 10 pages, 6 figures
Climate Change Adaptation via U.S. Land Use Transitions: A Spatial Econometric Analysis
Creators: name: Cho, Sung Ju
name: McCarl, Bruce A.
name: Wu, Ximing
name: Cho, Sung Ju
name: McCarl, Bruce A.
name: Wu, Ximing
Publisher: name: Unknown
Year: 2015
Subjects: subject: Environmental Economics and Policy
subject: Land Economics/Use
subject: Land use change
subject: climate change adaptation
subject: spatial econometrics

description: Climate change, coupled with biofuels development and other factors may well be changing US land usage patterns. We use a spatial econometric approach to estimate the drivers of US land use transitions in recent years. We consider transitions between six major land uses: agricultural land, forest, grassland, water, urban, and other uses. To examine drivers, we use a two-step linearized, spatial, multinomial logit model and estimate land use transition probabilities. Our results indicate that climate change is a driver of land use change and that movements to and from agricultural land and grassland exhibit opposite responses with climate change portending a movement out of cropland into grassland. These results indicate that adaptation to climate change through land usage change is ongoing but with spatial dependence.
Additional file 5 of Adaptive evolution of Moniliophthora PR-1 proteins towards its pathogenic lifestyle
Creators: name: Adrielle A. Vasconcelos
name: José, Juliana
name: Tokimatu, Paulo M.
name: Camargo, Antonio P.
name: Teixeira, Paulo J. P. L.
name: Thomazella, Daniela P. T.
name: Prado, Paula F. V. Do
name: Fiorin, Gabriel L.
name: Costa, Juliana L.
name: Figueira, Antonio
name: Carazzolle, Marcelo F.
name: Pereira, Gonçalo A. G.
name: Baroni, Renata M.
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics

description: Additional file 5. Protein sequence alignment and omega (dN/dS) values of each PR-1i family of Moniliophthora genomes. PDF file containing figures of the protein sequence alignment for each PR-1 family from Moniliophthora isolates and a bar chart of omega (dN/dS) values calculated for each amino acid site along the alignment using the site model test of codeML. Sites with positive selection signs are indicated by red (p-value ≤ 0.01) or orange (p-value ≤ 0.05) bars in the bar chart of omega values below the alignment. Figures are organized by alphabetical order of the names of PR-1 families.
Can Florida’s citrus industry be saved while preserving the environment? An economic analysis for the bio-control of the Asian Citrus Psyllid
Creators: name: Alvarez, Sergio
name: Solis, Daniel
name: Thomas, Michael
name: Alvarez, Sergio
name: Solis, Daniel
name: Thomas, Michael
Publisher: name: Unknown
Year: 2015
Subjects: subject: Crop Production/Industries
subject: Environmental Economics and Policy
subject: Bio-control
subject: citrus industry
subject: Florida

description: The Asian citrus psyllid (ACP) is the insect vector of a fatal disease for citrus known as Huanglongbing (HLB) or citrus greening disease. HLB has been responsible for significant economic losses in Asia and Africa with crop losses between 30 to 100% in many production areas. In 1998, HLB was first detected in Florida and by 2005 this pest had spread to most commercial citrus groves in the State, threatening the sustainability of Florida’s Citrus industry. Since no cure for this disease is yet available, the only way to prevent HLB is to stop the ACP. Two alternative management strategies exist to control the ACP: heavy pesticide use and bio-control. In Florida, heavy use of pesticides has been the preferred strategy used by growers. This strategy is affecting Florida’s biodiversity, water quality, and important ecosystem services like pollination by honeybees. To cope with this issue the State of Florida started an ACP bio-control program in 1998 using parasitic wasps from Asia. In this study, we conduct an economic analysis of the ACP bio-control program. In doing so, we document the cost of the program, assess the private and public benefits and conduct a cost-benefit analysis under alternative scenarios.
A Topological Data Analysis Perspective on Non-Covalent Interactions in Relativistic Calculations
Creators: name: Olejniczak, Małgorzata
name: Gomes, André Severo Pereira
name: Tierny, Julien
Publisher: name: arXiv
Year: 2019
Subjects: subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: Topological Data Analysis (TDA) is a powerful mathematical theory, largely unexplored in theoretical chemistry. In this work we demonstrate how TDA provides new insights into topological features of electron densities and reduced density gradients, by investigating the effects of relativity on the bonding of the Au4-S-C6H4-S'-Au'4 molecule. Whereas recent analyses of this species carried out with the Quantum Theory of Atoms-In-Molecules [Anderson et al., Chem. Eur. J. 25, 2538, 2019] concluded, from the emergence of new topological features in the electron density, that relativistic effects yielded non-covalent interactions between gold and hydrogen atoms, we show from their low persistence values (which decrease with increased basis set size) these features are not significant. Further analysis of the reduced density gradient confirms no relativity-induced non-covalent interactions in Au4-S-C6H4-S'-Au'4. We argue TDA should be integrated into electronic structure analysis methods, and be considered as a basis for the development of new topology-based approaches.