cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Using actigraphy to assess chronotype: Simpler is better
Creators: name: Wei, Yuxian
name: Wang, Shuo
name: Wang, Wendong
name: Lei, Xu
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Environmental Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Statistics
subject: FOS: Mathematics
subject: Science Policy

description: Actigraphy provides a unique method for objectively measuring sleep activity patterns, but confusion remains about how to use actigraphy data to determine chronotype. To determine the most suitable parameter, this study made a systematic comparison of actigraphy-derived parameters: the average midpoint of sleep of all record days (aMS-acti), cosine parameter (Bathyphase), and non-parametric parameter (L5-mid) in terms of the consistency with subjective chronotype parameters, test–retest reliability, and external validity. More importantly, we proposed multiple Munich Chronotype Questionnaire (MCTQ)-based actigraphy parameters: considering the difference between weekday (MSW-acti) with weekends (MSF-acti) and the sleep debt (MSFsc-acti). The study collected 5 days of actigraphy and scale data from 1,055 young adults, 138 of whom participated in the retest 2 years later. The results showed that, in terms of consistency with subjective chronotype, aMS-acti generally performed better than other actigraphy parameters. In addition, aMS-acti had the highest test–retest reliability and was more closely related to the Pittsburgh Sleep Quality Index (PSQI), Insomnia Severity Index (ISI), and Self-Rating Depression Scale (SDS). The results suggest that the simplest parameter (aMS-acti) is superior to traditional cosine and non-parametric parameters and MCTQ-derived parameters for short-term assessment of chronotype.
Additional file 2: of Overexpression of a bifunctional enzyme, CrtS, enhances astaxanthin synthesis through two pathways in Phaffia rhodozyma
Creators: name: Chi, Shuang
name: Yanfeng He
name: Ren, Jie
name: Su, Qian
name: Xingchao Liu
name: Chen, Zhi
name: Mingan Wang
name: Li, Ying
name: Jilun Li
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences

description: Table S1. PCR primers used in this study.
Additional file 2: Table S1. of Economic burden and its associated factors of hospitalized patients infected with A (H7N9) virus: a retrospective study in Eastern China, 2013â  2014
Creators: name: Huo, Xiang
name: Chen, Li-Ling
name: Hong, Lei
name: Lun-Hui Xiang
name: Fen-Yang Tang
name: Shan-Hui Chen
name: Gao, Qiang
name: Chen, Cong
name: Dai, Qi-Gang
name: Chuan-Wu Sun
name: Xu, Ke
name: Dai, Wen-Jun
name: Qi, Xian
name: Li, Chang-Cheng
name: Yu, Hui-Yan
name: Zhou, Yin
name: Hao-Di Huang
name: Xing-Yang Pan
name: Chang-Sha Xu
name: Zhou, Ming-Hao
name: Bao, Chang-Jun
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Science Policy
subject: 60506 Virology

description: Generalized linear models (Gamma with log link) selection. (DOCX 30 kb)
Additional file 3 of Symbiotic bacteria associated with entomopathogenic nematodes showed molluscicidal activity against Biomphalaria glabrata, an intermediate host of Schistosoma mansoni
Creators: name: Ardpairin, Jiranun
name: Subkrasae, Chanakan
name: Dumidae, Abdulhakam
name: Pansri, Supawan
name: Homkaew, Chanatinat
name: Meesil, Wipanee
name: Kumchantuek, Tewarat
name: Phoungpetchara, Ittipon
name: Dillman, Adler R.
name: Pavesi, Coralie
name: Bode, Helge B.
name: Tandhavanant, Sarunporn
name: Thanwisai, Aunchalee
name: Vitta, Apichat
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 3 Figure S1 Network analysis of Xenorhabdus stockiae (bAST17.4_TH) showing 355 nodes connected in networks with at least one neighbor and a single node. Eighteen known natural product compounds were highlighted in the network. Figure S2 Network analysis of Photorhabdus luminescens (bAPY3.5_TH) showing 244 nodes connected in networks with at least one neighbor and a single node. Eighteen known natural product compounds were highlighted in the network.
Disrupted rest-activity circadian rhythms are associated with all-cause mortality in patients with chronic kidney diseases
Creators: name: Kim, Youngdeok
name: Kim, Jisu
name: Joh, Richard Inho
name: Kenyon, Jonathan D.
name: Bohmke, Natalie J.
name: Kidd, Jason M.
name: Gumz, Michelle L.
name: Esser, Karyn A.
name: Kirkman, Danielle L.
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Physiology
subject: Science Policy
subject: Sociology
subject: FOS: Sociology
subject: Cancer

description: Circadian rhythms are important biological contributors to health. Rest activity rhythms (RAR) are emerging as biomarkers of circadian behavior that are associated with chronic disease when abnormal. RAR have not yet been characterized in chronic kidney diseases (CKD). Leveraging the National Health and Nutrition Examination Survey (2011–2014), patients with CKD (n = 1114; Mean [95% CI]: Age, 50 [58–61] y; 52% female) were compared with non-CKD individuals (n = 5885; Age, 47 [46–48] y; 52% female). Actigraphy data were processed for RAR parameters including rhythmic strength (amplitude), the rhythm adjusted mean (mesor), the timing of peak activity (acrophase), activity regularity (inter-daily stability), and activity fragmentation (intra-daily variability). Cox regression was performed to assess RAR parameters for the prediction of all-cause mortality. Compared to non-CKD adults, patients with CKD had a lower rhythmic amplitude and mesor, and exhibited greater fragmentation and less day-to-day stability in RAR (ps < 0.001). Among CKD patients, a lower rhythmic amplitude (HR [95% CI]: 0.88 [0.82–0.96]; p < 0.001), a lower rhythm adjusted mean (0.87 [0.81–0.95]; p = 0.002), and a higher daily activity fragmentation (1.87 [1.10–3.18]; p = 0.023) were associated with an increased risk of all-cause mortality. Patients with CKD showed dampened rhythmic amplitudes and greater fragmentation of activity that were associated with a higher risk of all-cause mortality. These findings demonstrate a relationship between circadian disruption and prognosis in patients with CKD.
The moderating role of protective factors in shift work disorder and health outcomes: A cross-sectional study
Creators: name: Harris, Rachael
name: Drummond, Sean P. A.
name: Sletten, Tracey L.
name: Wolkow, Alexander P.
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Medicine
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy
subject: Mental Health

description: This study investigated whether sleep-specific (e.g. chronotype) and traditional (e.g. resilience) protective factors were associated with reduced shift work disorder (SWD) risk and explored their role as moderators in the relationship between SWD risk and health. Shift workers (n = 126) participated in a cross-sectional study evaluating SWD risk (i.e. low vs. high; SWD-screening Questionnaire), mental health (Patient Health Questionnaire-9; Generalized Anxiety Disorder Questionnaire-7), physical health (Subjective Health Complaints Inventory), sleep (Pittsburgh Sleep Quality Index; Insomnia Severity Index; Epworth Sleepiness Scale), and protective factors (Resilience Scale; Social Provisions Scale; Survey of Perceived Organizational Support; Short Impulsive Behavior Scale; Circadian Type Inventory; reduced-Morningness-Eveningness Questionnaire). Logistic regressions revealed lower sleep languidity was associated with reduced odds (OR = 0.88 [0.79,0.96]) for having high SWD risk. Multiple regression analyses showed in shift workers with high social support or morningness, having high SWD risk was not associated with increased depression symptoms, or insomnia severity and poor sleep quality, respectively. Finally, in those with high or medium levels of perceived organizational support, high SWD risk was not associated with increased gastrointestinal and allergy complaints. Longitudinal research with larger samples is needed to confirm the moderating role of protective factors in the relationship between SWD risk and health.
Additional file 6: of Overexpression of a bifunctional enzyme, CrtS, enhances astaxanthin synthesis through two pathways in Phaffia rhodozyma
Creators: name: Chi, Shuang
name: Yanfeng He
name: Ren, Jie
name: Su, Qian
name: Xingchao Liu
name: Chen, Zhi
name: Mingan Wang
name: Li, Ying
name: Jilun Li
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences

description: Table S2. Comparison of 1H (500 MHz) and 13C (125 MHz) NMR data between the unknown carotenoid and HDCO (2012 report).
Can digitalisation facilitate ethical sustainable adaptive collaborative water governance in complex moral contexts?
Creators: name: Seeliger, Leanne
Publisher: name: Zenodo
Year: 2024
Subjects: digitalisation
digitalization
water governance
Philippi Horticultural Area
agriculture
water pollution
ethics

description: This is a presentation of Leanne Seeliger from Stellenbosch University (SU), South Africa held during her PRODIGEES research secondment to the the German Institute of Development and Sustainability (IDOS), Germany.

In her research project the researcher aims to find out, whether digitalisation can facilitate ethical sustainable adaptive collaborative water governance in complex moral contexts in the case of the Cape Flats Aquifer in the Philippi Horticultural Area in Cape Town, South Africa.
description: Horizon 2020, GA #873119
Additional file 1: of Economic burden and its associated factors of hospitalized patients infected with A (H7N9) virus: a retrospective study in Eastern China, 2013â  2014
Creators: name: Huo, Xiang
name: Chen, Li-Ling
name: Hong, Lei
name: Lun-Hui Xiang
name: Fen-Yang Tang
name: Shan-Hui Chen
name: Gao, Qiang
name: Chen, Cong
name: Dai, Qi-Gang
name: Chuan-Wu Sun
name: Xu, Ke
name: Dai, Wen-Jun
name: Qi, Xian
name: Li, Chang-Cheng
name: Yu, Hui-Yan
name: Zhou, Yin
name: Hao-Di Huang
name: Xing-Yang Pan
name: Chang-Sha Xu
name: Zhou, Ming-Hao
name: Bao, Chang-Jun
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 60506 Virology

description: Multilingual abstracts in the six official working languages of the United Nations. (PDF 283 kb)
Additional file 2: Table S2. of Genome-wide association study in Chinese Holstein cows reveal two candidate genes for somatic cell score as an indicator for mastitis susceptibility
Creators: name: Wang, Xiao
name: Peipei Ma
name: Jianfeng Liu
name: Zhang, Qin
name: Zhang, Yuan
name: Xiangdong Ding
name: Jiang, Li
name: Yachun Wang
name: Zhang, Yi
name: Dongxiao Sun
name: Shengli Zhang
name: Guosheng Su
name: Yu, Ying
Publisher: name: Figshare
Year: 2015
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics

description: Results of Bonferroni thresholds at genome-wide level and at chromosome-wide level for each chromosome. SNPs which are not assigned to any chromosomes are noted as â  0â  . (DOCX 24.8 kb)
Additional file 1: Table S1. of Genome-wide association study in Chinese Holstein cows reveal two candidate genes for somatic cell score as an indicator for mastitis susceptibility
Creators: name: Wang, Xiao
name: Peipei Ma
name: Jianfeng Liu
name: Zhang, Qin
name: Zhang, Yuan
name: Xiangdong Ding
name: Jiang, Li
name: Yachun Wang
name: Zhang, Yi
name: Dongxiao Sun
name: Shengli Zhang
name: Guosheng Su
name: Yu, Ying
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified

description: Distribution of SNPs on each chromosome after quality control and the average distances between adjacent SNPs. These data were derived from Bos_taurus_UMD_3.1 assembly ( http://www.ncbi.nlm.nih.gov/assembly/GCF_000003055.4/ ). SNPs which are not assigned to any chromosomes are noted as â  0â  . (DOCX 25.5 kb)
Additional file 1 of Migraine in the multiple sclerosis prodrome: a prospective nationwide cohort study in pregnant women
Creators: name: Eid, Karine
name: Torkildsen, Øivind
name: Aarseth, Jan
name: Cortese, Marianna
name: Holmøy, Trygve
name: Myhr, Kjell-Morten
name: Riise, Trond
name: Wergeland, Stig
name: Gilhus, Nils Erik
name: Bjørk, Marte-Helene
Publisher: name: figshare
Year: 2024
Subjects: subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: Mental Health
subject: Infectious Diseases
subject: FOS: Health sciences

description: Supplementary Material 1.
Additional file 2: of MicroRNA-19b-3p regulates nasopharyngeal carcinoma radiosensitivity by targeting TNFAIP3/NF-ÎşB axis
Creators: name: Huang, Teng
name: Yin, Li
name: Wu, Jing
name: Gu, Jia-Jia
name: Wu, Jian-Zhong
name: Chen, Dan
name: Yu, Hong-Liang
name: Ding, Kai
name: Zhang, Nan
name: Du, Ming-Yu
name: Lu-Xi Qian
name: Lu, Zhi-Wei
name: He, Xia
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Hematology
subject: 60506 Virology

description: Correlation between the expression of miR-19b-3p and clinical features. (DOCX 18 kb)
The effect of restricted and free-living conditions on light exposure and sleep in older adults
Creators: name: Pun, Teha B.
name: Rahimi, Matthew
name: Wassing, Rick
name: Phillips, Craig L.
name: Marshall, Nathaniel S.
name: Comas, Maria
name: D’Rozario, Angela L.
name: Hoyos, Camilla M.
name: Grunstein, Ron R.
name: Gordon, Christopher J.
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Medicine
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy
subject: Mental Health

description: During the COVID-19 pandemic, studies reported that restricted living conditions were associated with worse subjective sleep quality. This effect might have been caused by reduced light exposure during lockdowns. We investigated light exposure levels, subjective and objective sleep and physical activity levels in older adults during restricted and free-living conditions after the pandemic. Ninety-one participants (62.7 ± 8.4 years) recruited from the community using social media with 44 participants (63.4 ± 8.9 years) completed follow-up during free-living conditions. Participants wore an actigraphy device and completed sleep diaries for 7 days during each condition. Light values were extracted in hourly bins across the 24-h period and objective and subjective sleep were compared between the conditions. There was an increase in mean 24-h light exposure during restricted-living (1103.7 ± 1024.8 lux) compared to free-living (803.0 ± 803.6 lux; p < 0.001). This was partially related to participants spending 18 min more in bright light conditions (>1,000 lux) during wakefulness in restricted living (2.6 ± 1.9 h) compared to free-living (2.3 ± 2.0 h; p = 0.036). Despite differences in light exposure, there were no significant differences in objective and subjective sleep parameters between the two conditions. More research is required to better understand behaviours related to light exposure and how this may impact on sleep.
The appropriate and inappropriate uses of saliva melatonin measurements
Creators: name: Kennaway, David J.
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Pharmacology
subject: Biotechnology
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Mental Health
subject: Infectious Diseases
subject: FOS: Health sciences

description: Melatonin is produced in the pineal gland under very tight control through the influences of light and the suprachiasmatic nucleus. As such, melatonin circulates in the blood at levels <3 pg/ml during the day and is only actively secreted at night reaching levels of approximately 100 pg/ml. As a consequence of binding to plasma proteins, free melatonin appears in saliva at approximately one third the plasma concentration. Measurement of melatonin is technically challenging because of these very low concentrations and while a number of commercial immunoassay kits are available and mass spectrometry assay methods have been published, not all are fit for purpose and can lead to unreliable conclusions. In this review I discuss the aspects of pineal melatonin production that saliva melatonin reflects, the factors influencing melatonin production or metabolism, saliva collection and analysis methods. Examples are provided of the appropriate use of saliva melatonin measurements; Dim Light Melatonin Onset (DLMO) assessment, impact of light on melatonin and the monitoring of rhythms prior to specific treatments. Examples of inappropriate use of saliva melatonin measurements are also provided including the use of poorly validated assays, morning saliva collections, attempts to stimulate melatonin, and linking specific illnesses to saliva melatonin levels.
Additional file 1: of Long-Term, Competitive Swimming and the Association with Atrial Fibrillation
Creators: name: Schreiner, Andrew
name: Keith, Brad
name: Abernathy, Karen
name: Jingwen Zhang
name: Brzezinski, Walter
Publisher: name: Figshare
Year: 2016
Subjects: subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Atrial fibrillation in endurance athletes study. (PDF 39 kb)
Scaphoideus
Creators: name: Chen, Fangying
name: Dai, Wu
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Cicadellidae
Scaphoideus

description: Key to males of Scaphoideus with bicolored forewings
1. Style apophysis short and connective processes needlelike (Fig. 3 G, H)........................................... 2
- Style apophysis elongate and connective processes stout, not needlelike (Fig. 2H, J)................................. 3
2. Subgenital plate long, 2.5 times longer than greatest width near base; aedeagal shaft with a pair of apical processes (India: Karnataka).............................................................. S. bicoloratus Viraktamath & Mohan
- Subgenital plate elongate, 3.5 times longer than greatest width near base (Fig. 3 H); aedeagus with a single process (Fig. 3 D, E) (China: Shandong).................................................................. S. taishanenisis sp. nov.
3. Aedeagal processes shorter, broader and curved in the shape of horns (Fig. 2C–G) (China: Guangdong).................................................................................................... S. dinghuensis sp. nov.
- Aedeagal processes longer, slender and straight (China: Taiwan)............................ S. pingtungisis (Dai and Li)
description: Published as part of Chen, Fangying & Dai, Wu, 2015, Bicoloratum Dai and Li, a new synonym of the leafhopper genus Scaphoideus Uhler (Hemiptera, Cicadellidae, Deltocephalinae), with description of two new species, pp. 275-283 in Zootaxa 3985 (2) on page 277, DOI: 10.11646/zootaxa.3985.2.6, http://zenodo.org/record/233283
Additional file 1 of The development of the Egyptian 24-h movement guidelines for adults aged 18–50 years old: an integration of sleep, sedentary behavior, and physical activity by the Egyptian Academy of Bone and Muscle Health
Creators: name: El Miedany, Yasser
name: Toth, Mathias
name: Plummer, Susan
name: Elgaafary, Maha
name: Mahran, Safaa
name: Elwakil, Walaa
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences

description: Supplementary Material 1.
Additional file 1: Table S1. of Genetic disruption of Ano5 in mice does not recapitulate human ANO5-deficient muscular dystrophy
Creators: name: Xu, Jing
name: Refaey, Mona El
name: Xu, Li
name: Lixia Zhao
name: Yandi Gao
name: Floyd, Kyle
name: Tallib Karaze
name: Janssen, Paul
name: Renzhi Han
Publisher: name: Figshare
Year: 2015
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Pharmacology
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Primer list. Primers for genotyping, RT, and real-time PCR.
Additional file 1 of Safflower CtFT genes orchestrating flowering time and flavonoid biosynthesis
Creators: name: Li, Zhiling
name: Yu, Lili
name: Umar, Abdul Wakeel
name: Wang, Jiaruo
name: Zhang, Jian
name: Wang, Nan
name: Zhang, Min
name: Yao, Na
name: Ahmad, Naveed
name: Liu, Xiuming
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Supplementary Material 1.
Relevance of high glycaemic index breakfast for heart rate variability among collegiate students with early and late chronotypes
Creators: name: Krueger, Bettina
name: Stutz, Bianca
name: Jakobsmeyer, Rasmus
name: Reinsberger, Claus
name: Buyken, Anette E.
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences

description: Plasma glucose spikes affect cardiac autonomic modulation resulting in a decrease of heart rate variability (HRV). We hypothesize that a later chronotype or a higher morning plasma melatonin level is associated with larger decreases of HRV following an early high glycaemic index (GI) breakfast. In persons with an early (n = 21) or a late (n = 15) chronotype who consumed a high GI breakfast at 7 a.m. glucose data were continuously monitored. Time domain HRV parameters were calculated from blood volume pulses derived by wireless wrist worn multisensor. HRV changes (values after minus values before breakfast) were associated with chronotype by multivariable linear regression adjusted for age, sex and baseline levels. Morning plasma melatonin levels were determined from samples drawn on the run-in day. Time domain parameters indicate a higher HRV before high GI breakfast in both chronotypes. A later chronotype tended to be associated with smaller decreases of mean interbeat intervals (p = 0.08) only; no associations were seen with morning melatonin levels. This exploratory analysis in a small sample provides a first indication that in young healthy adults later chronotype might be associated with reduced ANS activation following a high GI breakfast. Future studies should elucidate whether this indicates parasympathetic or sympathetic inhibition.
Additional file 7: of Contributions of tropodithietic acid and biofilm formation to the probiotic activity of Phaeobacter inhibens
Creators: name: Wenjing Zhao
name: Dao, Christine
name: Murni Karim
name: Gomez-Chiarri, Marta
name: Rowley, David
name: Nelson, David
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Developmental Biology
subject: Inorganic Chemistry
subject: Plant Biology

description: Competition assay between P. inhibens S4Sm strains and V. anguillarum NB10Sm without pre-colonization by P. inhibens . The mixed cultures are S4Sm-OFP with NB10Sm-GFP, clpX-OFP with NB10Sm-GFP and exoP-OFP with NB10Sm-GFP. A) Single channel and merged confocal microscopy images of mixed biofilm development by OFP-producing strains (S4Sm, clpX mutant or exoP mutant) and GFP-producing V. anguillarum NB10Sm-GFP on the surface of glass coverslip at 48Â h. The data presented is from a representative experiment of two independent experiments. B) Growth of sessile NB10Sm in co-culture system with different Phaeobacter strains. C) Comparison of growth of sessile V. anguillarum (NB10Sm) in different co-culture system and monoculture control. D) Growth of planktonic V. anguillarum (NB10Sm) in co-culture system with different Phaeobacter strains. E) Comparison of growth of planktonic V. anguillarum (NB10Sm) in different co-culture system and monoculture control. The data presented are average of two independent experiments and each independent experiment has three replicates. Error bars represent one standard deviation. (PDF 1811Â kb)
Scaphoideus pingtungisis Dai and Li 2011, n. comb.
Creators: name: Chen, Fangying
name: Dai, Wu
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Cicadellidae
Scaphoideus
Scaphoideus pingtungisis

description: Scaphoideus pingtungisis (Dai and Li, 2011) n. comb.
Bicoloratum pintungisis Dai and Li 2011 [in Li, Dai & Xing, 2011: 49, fig. 5–38(1–9)]
Distribution. China (Taiwan).
Remarks. This species was described by Dai and Li (in Li et al. 2011) from Taiwan based on two male specimens deposited in National Museum of Natural Science (NMNS), Taichung, Taiwan. We were not able to study the type material but according to the original description and illustrations, the shape and appearance of S. pingtungisis is very similar to S. bicoloratus Viraktamath & Mohan. The former differs as follows: (1) face without stripe; (2) style with apophysis very long; (3) aedeagal shaft strongly curved ventrad at middle with pair of apical processes parallel to shaft; (4) processes of connective divergent. This species is also very similar to S. dinghuensis sp. nov. in external shape and male genitalia, but differs as indicated in the description below.
description: Published as part of Chen, Fangying & Dai, Wu, 2015, Bicoloratum Dai and Li, a new synonym of the leafhopper genus Scaphoideus Uhler (Hemiptera, Cicadellidae, Deltocephalinae), with description of two new species, pp. 275-283 in Zootaxa 3985 (2) on page 277, DOI: 10.11646/zootaxa.3985.2.6, http://zenodo.org/record/233283
Chronobiological perspectives and meteorological associations in symptomatic popliteal artery aneurysms
Creators: name: Leinweber, Maria Elisabeth
name: Hofmann, Amun Georg
name: Karl, Thomas
name: Shayesteh-Kheslat, Roushanak
name: Engelhardt, Michael
name: Schmandra, Thomas
name: Weis-Müller, Barbara
name: Schmitz-Rixen, Thomas
name: Jung, Georg
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Medicine
subject: Environmental Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified

description: The potential influence of circadian rhythm, seasonal variations, and alterations in meteorological parameters has been studied across various vascular events. However, there is a lack of evidence on the potential chronobiological impacts on thromboembolic events related to the most common peripheral aneurysm, the popliteal artery aneurysm (PAA). Data was obtained from a German PAA registry and the German Meteorological Service (Deutscher Wetterdienst). In this observational cohort study seasonality and chronobiology as well as associations with meteorological parameters of symptomatic PAA were investigated. In a multivariate logistic regression analysis, it was further analyzed whether meteorological parameters could distinguish asymptomatic from symptomatic patients in the registry. Of 1200 registered PAA, n = 142 PAA presented with acute limb ischemia between February 2011 and September 2022. More symptomatic patients (57.0%) presented to the hospital between January and June than in the second half of the year with a nadir in the fall season. Symptom onset was predominantly in the morning hours (39.5%). Atmospheric pressure and humidity values from the index dates diverged from a normal distribution showing a bimodal (“double-peak”) configuration. Most patients developed symptoms after a reduction in temperatures compared to 1 or 2 d prior to the index date. However, we found evidence for an interaction between age and temperature difference, where the effects of a decreasing temperature fade with increasing age. Facing the complexity of individual-environment interactions, further investigations are needed to determine whether meteorological parameters are true risk modifiers or surrogates for seasonal differences and altered behaviors.
MOESM1 of Examination of the effects of Campylobacter concisus zonula occludens toxin on intestinal epithelial cells and macrophages
Creators: name: Vikneswari Mahendran
name: Liu, Fang
name: Riordan, Stephen
name: Grimm, Michael
name: Tanaka, Mark
name: Zhang, Li
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Biochemistry
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: Cancer
subject: Inorganic Chemistry
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1. SDS-PAGE and Western blot images of EP and EP-ZotP14UCO-S1 proteins. EP and EP-ZotP14UCO-S1 proteins were purified from E. coli transformed with pETBlue-2 vector or pETBlue-2-zot 808T using Niâ  NTA columns as per manufacturerâ  s instruction. The flow through, column wash and eluates were collected and subjected to SDS-PAGE to reveal proteins. Eluates were also subjected to Western blot to detect Zot using anti-histidine antibodies. A and B purification of EP, A showing SDS-PAGE and B showing Western blot. C and D purification of EP-ZotP14UCO-S1, C showing SDS-PAGE and D showing Western blot. The Zot protein (44 kD) was detected in EP-P14UCO-S1 not in EP. FT (Flow through), W1 (first wash), W2 (second wash), El-E4 (elutions 1-4). E1 was used for conducting experiments in this study.
Additional file 1 of The prevalence and clinical significance of EGFR mutations in non-small cell lung cancer patients in Egypt: a screening study
Creators: name: Helal, Asmaa A.
name: Kamal, Ibrahim H.
name: Osman, Ahmed
name: Youssef, Magdy
name: Ibrahim, Adel K.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Additional file 1: Table S1. The Age, Smoking status and Gender for the study subjects and their corresponding detected EGFR mutations.
Additional file 2: of Contributions of tropodithietic acid and biofilm formation to the probiotic activity of Phaeobacter inhibens
Creators: name: Wenjing Zhao
name: Dao, Christine
name: Murni Karim
name: Gomez-Chiarri, Marta
name: Rowley, David
name: Nelson, David
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Hematology

description: 1H NMR spectrum (500Â MHz, C6D6) for purified TDA. The spectrum is expanded to show the aromatic region of interest. Spectrum was referenced to residual benzene resonance at 7.16Â ppm. (PDF 110Â kb)
Telomere length and chronotype among women in the California Teachers Study (CTS)
Creators: name: Blanchard, Mia
name: Lin, Jue
name: Hurley, Susan
name: Goldberg, Debbie
name: Von Behren, Julie
name: Wang, Sophia S.
name: Reynolds, Peggy
name: DeHart, Jessica Clague
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Science Policy

description: While links between certain chronotypes and poorer health outcomes have been well established in previous studies, few studies have examined the relationship between chronotype and cellular aging. Using data from the California Teachers Study (CTS), the present study evaluates the relationship between cellular aging and chronobiology through an analysis of leukocyte telomere length (LTL) and chronotype among 817 predominantly postmenopausal women with no history of cancer and occupations not associated with night-shift work. Unconditional logistic regression models were run to estimate odds ratios (ORs) for each chronotype category, adjusted for age, ethnicity, and smoking status. Analyses were then stratified by potential modifiers to assess whether results varied among specific subgroups within the sample. Women who reported being current evening types and evening types from teen years to now were significantly less likely to have short LTL compared to women who reported being current morning types or morning types from teen years to now (OR = 0.72; 95% CI = 0.53-0.98; OR = 0.57; 95% CI = 0.39-0.84). Our results suggest that women with no history of cancer who identify as evening chronotypes may undergo decreased cellular aging compared to women in the same population who identify as morning types. Further studies on populations of postmenopausal women are warranted.
Additional file 1 of Impact of drug-resistant tuberculosis on socio-economic status, quality of life and psychological well-being of patients in Bucharest, Romania: a prospective cohort study
Creators: name: Ramachandran, Rupa
name: Dumitrescu, Andreea
name: Baiceanu, Dragos
name: Popa, Cristina
name: Dragomir, Antonela
name: Mahler, Beatrice
name: Hoelscher, Michael
name: Lange, Christoph
name: Heyckendorf, Jan
name: Rachow, Andrea
name: Ibraim, Elmira
name: Ivanova, Olena
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: Mental Health

description: Supplementary Material 1
Additional file 3: of Contributions of tropodithietic acid and biofilm formation to the probiotic activity of Phaeobacter inhibens
Creators: name: Wenjing Zhao
name: Dao, Christine
name: Murni Karim
name: Gomez-Chiarri, Marta
name: Rowley, David
name: Nelson, David
Publisher: name: Figshare
Year: 2016
Subjects: subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology

description: 1H NMR spectroscopic data of purified TDA from P. inhibens. Comparison is provided to data published by Liang (2003). (PDF 7Â kb)
Mesochrysopidae Handlirsch 1906
Creators: name: Yang, Qiang
name: Makarkin, Vladimir N.
name: Ren, Dong
Publisher: name: Zenodo
Year: 2012
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Neuroptera
Mesochrysopidae

description: Mesochrysopidae Handlirsch, 1906
Genus Protoaristenymphes Nel et Henrotay, 1994
Type species. Protoaristenymphes bascharagensis Nel et Henrotay, 1994, by original designation.
Diagnosis. Medium-sized, forewing length 16–25 mm [20 mm in Aristenymphes Panfilov, 1980; 46 mm in Macronympha Panfilov, 1980]; in forewing, M forked somewhat distal to or at level of origin of RP [shared with Aristenymphes; strongly distal in Macronympha]; im long, 5–6 times as long as wide [shared with Macronympha; 4 times in Aristenymphes]; MP with four branches [shared with Macronympha; two in Aristenymphes]; AA3+4 deeply forked [unknown in Macronympha; shallowly forked in Aristenymphes].
Species included. Two species from the Jurassic of Eurasia: Protoaristenymphes bascharagensis Nel et Henrotay, 1994 from the Early Jurassic of Bascharage, Luxembourg, and P. daohugouensis sp. nov. from the Middle Jurassic of Daohugou, China.
Remarks. The venation of this genus is very similar to that of the genera Macronympha and Aristenymphes known from the Late Jurassic of Kazakhstan (Panfilov, 1980). These three genera are oldest in the family (Early Toarcian to Oxfordian/Kimmeridgian) and clearly closely related. Their forewing venation strongly differs from those of other (younger) genera of Mesochrysopidae, mainly in the arrangement of their crossveins, the presence/ absence of Banksian folds (lines), the configuration of MP and CuA and by the veinlets of ScP+RA. The generic status of Macronympha, Aristenymphes and Protoaristenymphes needs further confirmation as the differences between them are minimal (see diagnosis of Protoaristenymphes). However, the discovery of a new species whose character states well agree with those of one genus shows that these minimal differences may be indeed generic.
Protoaristenymphes bascharagensis is represented by a forewing, lacking the apex. The estimated complete length of this wing is about 16.5 mm, not 18 mm as estimated by Nel & Henrotay (1994).
description: Published as part of Yang, Qiang, Makarkin, Vladimir N. & Ren, Dong, 2012, New fossil Mesochrysopidae (Neuroptera) from the Mesozoic of China, pp. 1-14 in Zootaxa 3597 on page 4, DOI: 10.5281/zenodo.210269
Additional file 1: of Contributions of tropodithietic acid and biofilm formation to the probiotic activity of Phaeobacter inhibens
Creators: name: Wenjing Zhao
name: Dao, Christine
name: Murni Karim
name: Gomez-Chiarri, Marta
name: Rowley, David
name: Nelson, David
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: Plant Biology

description: A) Electrospray ionization MS of purified TDA, structure shown on right, in the positive ion mode. The spectrum shows expected losses of H2O and CO2H. (PDF 64Â kb)
Additional file 1 of Adequate post-ischemic reperfusion of the mouse brain requires endothelial NFAT5
Creators: name: Kunze, Reiner
name: Wacker, Paul
name: Breuer, Paula
name: Nasyrov, Emil
name: Kur, Ivan M.
name: Weigert, Andreas
name: Wagner, Andreas H.
name: Marti, Hugo H.
name: Korff, Thomas
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Mental Health

description: Supplementary file 1.
Additional file 1: Table S1. of Designing phase 3 sepsis trials: application of learned experiences from critical care trials in acute heart failure
Creators: name: Mebazaa, Alexandre
name: Laterre, Pierre
name: Russell, James
name: Bergmann, Andreas
name: Gattinoni, Luciano
name: Gayat, Etienne
name: Harhay, Michael
name: Hartmann, Oliver
name: Hein, Frauke
name: Kjolbye, Anne
name: Legrand, Matthieu
name: Lewis, Roger
name: Marshall, John
name: Marx, Gernot
name: Radermacher, Peter
name: Schroedter, Mathias
name: Scigalla, Paul
name: Stough, Wendy
name: Struck, Joachim
name: Berghe, Greet Van Den
name: Yilmaz, Mehmet
name: Angus, Derek
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: This table describes the definitions of sepsis and septic shock that have been used in pivotal sepsis trials. (DOCX 21 KB)
MOESM1 of Continuous production of biohythane from hydrothermal liquefied cornstalk biomass via two-stage high-rate anaerobic reactors
Creators: name: Bu-Chun Si
name: Li, Jia-Ming
name: Zhang-Bing Zhu
name: Zhang, Yuan-Hui
name: Lu, Jian-Wen
name: Shen, Rui-Xia
name: Zhang, Chong
name: Xing, Xin-Hui
name: Zhidan Liu
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Figure S1. Gas content in the two-stage fermentation. Figure S2. Gas content in the single-stage fermentation. Figure S3 The floating of granules in the UASB biomethane systems. Figure S4 Accumulative biohydrogen production (A), hydrogen content (B), methane production (C), methane content (D) in two-stage process, and accumulative methane production (E), methane content (F) in single-stage process. Figure S5 COD removal in the two-stage and single-stage batch fermentation. Figure S6 Taxonomic classification of microbial community in biohythane and biomethane systems at the phylum (A, C) and family (B, D) levels through Illumina Miseq sequencing. Table S1 The biogas yield (Pm), maximum production rate(Rm), lag phase (Îť), and (R2) in the batch fermentation.
MOESM3 of Evaluation of the accuracy of diagnostic scales for a syndrome in Chinese medicine in the absence of a gold standard
Creators: name: Wang, Xiao
name: Zhou, Vanessa
name: Liu, Qiang
name: Gao, Ying
name: Zhou, Xiao-Hua
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology

description: Additional file 3. Research Programme.
MOESM4 of Evaluation of the accuracy of diagnostic scales for a syndrome in Chinese medicine in the absence of a gold standard
Creators: name: Wang, Xiao
name: Zhou, Vanessa
name: Liu, Qiang
name: Gao, Ying
name: Zhou, Xiao-Hua
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified

description: Additional file 4. Informed consent.
Additional file 1 of Mll4 in skeletal muscle fibers maintains muscle stem cells
Creators: name: Kim, Yea-Eun
name: Hann, Sang-Hyeon
name: Jo, Young-Woo
name: Yoo, Kyusang
name: Kim, Ji-Hoon
name: Lee, Jae W.
name: Kong, Young-Yun
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Supplementary Material 1: Additional file 1 (PDF)
Kareninoides Yang, Makarkin & Ren, 2012, gen. nov.
Creators: name: Yang, Qiang
name: Makarkin, Vladimir N.
name: Ren, Dong
Publisher: name: Zenodo
Year: 2012
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Neuroptera
Mesochrysopidae
Kareninoides

description: Genus Kareninoides gen. nov.
Type species. Kareninoides lii gen. et sp. nov.
Etymology. Karenin- (from Karenina Martins-Neto, 1997, a genus-group name), and -oides (the Latin suffix meaning “resembling”, from the Greek eidos, resemblance), referring to the similarity of its venation to that of the genus Karenina. Gender: masculine.
Diagnosis. Most similar to Karenina but distinguished from it as well as from the other three genera with MP touching CuA (or connected by very short crossvein) (i.e., Allopterus J. Zhang, 1991, Triangulochrysopa Nel et al., 2005, Dryellina Martins-Neto et Rodrigues, 2009) by the following character states: forewing clearly elongate, with hind margin smoothly slightly curved [forewing nearly oval with hind margin strongly curved in Karenina]; hind wing length 0.9 of forewing (i.e., hind wing not shortened) [markedly shortened in Karenina (0.6–0.8 of forewing length); strongly shortened in Allopterus, Triangulochrysopa, Dryellina]; in hind wing, both Banksian lines well developed, long [not developed in other four genera].
Species included. Two species of the Early Cretaceous (Barremian) of Eurasia: Kareninoides lii gen. et sp. nov. from the Yixian Formation of China, and K. inexpectus (Nel et al. 2005), comb. nov., from Las Hoyas, Spain (preliminary assignment).
Remarks. The new species described below cannot be assigned to any of existing genera of Mesochrysopidae. Its forewing MP touches CuA (i.e., the ‘X-crossing’ of Nel et al. 2005) as in genera of the subfamily Allopterinae (i.e., Karenina, Allopterus, Triangulochrysopa, Dryellina). The prothorax of Kareninoides gen. nov. is elongate as in other Allopterinae. These two character states are considered as probable autapomorphies of this subfamily (Nel et al. 2005). However, its hind wing is much more similar to that of Mesochrysopa Handlirsch, 1906 than to any genera of Allopterinae in the size, venation and the presence of Banksian lines. The new genus probably possesses the most generalized venation among Allopterinae (if it indeed belongs to this subfamily).
description: Published as part of Yang, Qiang, Makarkin, Vladimir N. & Ren, Dong, 2012, New fossil Mesochrysopidae (Neuroptera) from the Mesozoic of China, pp. 1-14 in Zootaxa 3597 on pages 6-7, DOI: 10.5281/zenodo.210269