cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Coelogyne quinquangularis M. W. Chase & Schuit. 2021, comb. nov.
Creators: name: Chase, Mark W.
name: Gravendeel, Barbara
name: Sulistyo, Bobby P.
name: Wati, Richa Kusuma
name: Schuiteman, André
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Liliopsida
Asparagales
Orchidaceae
Coelogyne
Coelogyne quinquangularis

description: Coelogyne quinquangularis (J.J.Sm.) M.W.Chase & Schuit., comb. nov.
 Basionym: Dendrochilum quinquangulare J.J.Sm., Blumea 5: 305 (1943).
description: Published as part of Chase, Mark W., Gravendeel, Barbara, Sulistyo, Bobby P., Wati, Richa Kusuma & Schuiteman, André, 2021, Expansion of the orchid genus Coelogyne (Arethuseae; Epidendroideae) to include Bracisepalum, Bulleyia, Chelonistele, Dendrochilum, Dickasonia, Entomophobia, Geesinkorchis, Gynoglottis, Ischnogyne, Nabaluia, Neogyna, Otochilus, Panisea and Pholidota, pp. 94-134 in Phytotaxa 510 (2) on page 124, DOI: 10.11646/phytotaxa.510.2.1, http://zenodo.org/record/5426332
Correlation effects on the magnetization process of the Kitaev model
Creators: name: Ido, Kota
name: Misawa, Takahiro
Publisher: name: arXiv
Year: 2019
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: By using the variational Monte Carlo method, we study the magnetization process of the Kitaev honeycomb model in a magnetic field. Our trial wavefunction is a generalized Bardeen-Cooper-Schrieffer wave function with the Jastrow correlation factor, which exactly describes the ground state of the Kitaev model at zero magnetic field using the Jordan-Wigner (JW) transformation. We find that two phase transitions occur for the antiferromagnetic Kitaev coupling, while only one phase transition occurs for the ferromagnetic Kitaev coupling. For the antiferromagnetic Kitaev coupling, we also find that the topology of the momentum distribution of the JW fermions changes at the transition point from the Kitaev spin liquid to an intermediate state. Our numerical results indicate that the intermediate state between the Kitaev spin liquid and the fully polarized phases stably exists in the bulk system on two dimensions for the antiferromagnetic Kitaev coupling against many-body correlations.
description: 7 pages, 4 figures
Squelched Galaxies and Dark Halos
Creators: name: Tully, R. Brent
name: Somerville, Rachel S.
name: Trentham, Neil
name: Verheijen, Marc A. W.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: There is accumulating evidence that the faint end of the galaxy luminosity function might be very different in different locations. The luminosity function might be rising in rich clusters and flat or declining in regions of low density. If galaxies form according to the model of hierarchical clustering then there should be many small halos compared to the number of big halos. If this theory is valid then there must be a mechanism that eliminates at least the visible component of galaxies in low density regions. A plausible mechanism is photoionization of the intergalactic medium at a time before the epoch that most dwarf galaxies form in low density regions but after the epoch of formation for similar systems that ultimately end up in rich clusters. The dynamical timescales are found to accommodate this hypothesis in a flat universe with Omega_m < 0.4. If small halos exist but simply cannot be located because they have never become the sites of significant star formation, they still might have dynamical manifestations. These manifestations are hard to identify in normal groups of galaxies because small halos do not make a significant contribution to the global mass budget. However, it could be entertained that there are clusters of halos where there are only small systems, clusters that are at the low mass end of the hierarchical tree. There may be places where only a few small galaxies managed to form, enough for us to identify and use as test probes of the potential. It turns out that such environments might be common. Four probable groups of dwarfs are identified within 5 Mpc and the assumption they are gravitationally bound suggests M/L_B ~ 300 - 1200 M_sun/L_sun, 6 +/- factor 2 times higher than typical values for groups with luminous galaxies.
description: Accepted ApJ 569, (April 20), 2002, 12 pages, 6 figures, 1 table
Antepipona quadrituberculata
Creators: name: Gusenleitner, J.
Publisher: name: Zenodo
Year: 2012
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Eumenidae
Antepipona
Antepipona quadrituberculata

description: Antepipona quadrituberculata (SMITH 1857)
Z a m b i a: 62 km SW Serenje, 22.11.200 5, 2, 1, leg. Snižek; 82 km NWW Mpita, 27.11.200 5, 1, leg. Snižek, coll. OLM.
Die Verbreitung war bisher auf Lesotho, South Africa und Zimbabwe beschränkt (CARPENTER et al. 2009).
description: Published as part of Gusenleitner, J., 2012, Über bemerkenswerte Faltenwespen aus der äthiopischen Region Teil 9 (Hymenoptera: Vespidae: Eumeninae), pp. 1159-1176 in Linzer biologische Beiträge 44 (2) on page 1167, DOI: 10.5281/zenodo.5329007
Towards FLASH proton therapy: the impact of treatment planning and machine characteristics on achievable dose rates
Creators: name: Water, Steven Van De
name: Sairos Safai
name: Schippers, Jacobus M.
name: Weber, Damien C.
name: Lomax, Antony J.
Publisher: name: Taylor & Francis
Year: 2019
Subjects: subject: Biophysics
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Biotechnology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Background: This study aimed at evaluating spatially varying instantaneous dose rates for different intensity-modulated proton therapy (IMPT) planning strategies and delivery scenarios, and comparing these with FLASH dose rates (>40 Gy/s). Material and methods: In order to quantify dose rates in three-dimensions, we proposed the ‘dose-averaged dose rate’ (DADR) metric, defined for each voxel as the dose-weighted mean of the instantaneous dose rates of all spots (i.e., pencil beams). This concept was applied to four head-and-neck cases, each planned with clinical (4 fields) and various spot-reduced IMPT techniques: ‘standard’ (4 fields), ‘arc’ (120 fields) and ‘arc-shoot-through’ (120 fields; 229 MeV only). For all plans, different delivery scenarios were simulated: constant beam intensity, variable beam intensity for a clinical Varian ProBeam system, varied per energy layer or per spot, and theoretical spot-wise variable beam intensity (i.e., no monitor/safety limitations). DADR distributions were calculated assuming 2-Gy or 6-Gy fractions. Results: Spot-reduced plans contained 17–52 times fewer spots than clinical plans, with no deterioration of plan quality. For the clinical plans, the mean DADR in normal tissue for 2-Gy fractionation was 1.7 Gy/s (median over all patients) at maximum, whereas in standard spot-reduced plans it was 0.7, 4.4, 7.1, and 12.1 Gy/s, for the constant, energy-layer-wise, spot-wise, and theoretical spot-wise delivery scenarios, respectively. Similar values were observed for arc plans. Arc-shoot-through planning resulted in DADR values of 3.0, 6.0, 14.1, and 24.4 Gy/s, for the abovementioned scenarios. Hypofractionation (3×) generally resulted in higher dose rates, up to 73.2 Gy/s for arc-shoot-through plans. The DADR was inhomogeneously distributed with highest values at beam entrance and at the Bragg peak. Conclusion: FLASH dose rates were not achieved for conventional planning and clinical spot-scanning machines. As such, increased spot-wise beam intensities, spot-reduced planning, hypofractionation and arc-shoot-through plans were required to achieve FLASH compatible dose rates.
The unpolarized two-loop massive pure singlet Wilson coefficients for deep-inelastic scattering
Creators: name: Blümlein, J.
name: De Freitas, A.
name: Raab, C. G.
name: Schönwald, K.
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Experiment (hep-ex)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We calculate the massive two--loop pure singlet Wilson coefficients for heavy quark production in the unpolarized case analytically in the whole kinematic region and derive the threshold and asymptotic expansions. We also recalculate the corresponding massless two--loop Wilson coefficients. The complete expressions contain iterated integrals with elliptic letters. The contributing alphabets enlarge the Kummer-Poincaré letters by a series of square-root valued letters. A new class of iterated integrals, the Kummer-elliptic integrals, are introduced. For the structure functions $F_2$ and $F_L$ we also derive improved asymptotic representations adding power corrections. Numerical results are presented.
description: 42, pages Latex, 8 Figures
Building information modeling (BIM), System dynamics (SD), and Agent-based modeling (ABM): Towards an integrated approach
Creators: name: Uddin, Mohammad Nyme
name: WANG, Qiancheng
name: Wei, Hsi-Hsien
name: Chi, Hung-Lin
name: Ni, Meng
Publisher: name: figshare
Year: 2022
Subjects: classificationCode: 330102
subject: Architectural design
classificationCode: 339999
subject: Other built environment and design not elsewhere classified

description: Several frameworks are introduced to address occupancy-based building performance. However, the performance predictions obtained using these frameworks deviate from real performance. So, this study’s aim is to represent a new framework for the automatic assessment of occupants’ comfort and building indoor performance using BIM and the SD-ABM platform. Initially, an office space in Hong Kong, consisting of 10 occupants, was considered for the BIM model construction. The occupancy, indoor data and required equations are defined using the SD-ABM model. Essential data from the BIM model can be transferred using the Dynamo-Excel platform. Furthermore, a validation study was conducted using a paper-based survey from the occupants and sensor data for environmental data monitoring while error metrics were also calculated. The framework actively predicts occupant presence, comfort level, temperatures, and CO2 concentration in the office space. However, a comprehensive usability and feasibility study is required to assess the efficiency of the framework.
Triggered star formation in expanding shells
Creators: name: Ehlerova, S.
name: Palous, J.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We discuss fragmentation processes which induce star formation in dense walls of expanding shells. The influence of the energy input, the ISM scale-height and speed of sound in the ambient medium is tested. We formulate the condition for the gravitational fragmentation of expanding shells: if the total surface density of the disc is higher than a certain critical value, shells are unstable. The value of the critical density depends on the energy of the shell and the sound speed in the ISM.
description: 5 pages, 2 figures, accepted by MNRAS; see also astro-ph/0105530, astro-ph/0106010
The Different Regimes of Axion Gauge Field Inflation
Creators: name: Domcke, Valerie
name: Sandner, Stefan
Publisher: name: arXiv
Year: 2019
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: In axion gauge field inflation an axion-like particle driving cosmic inflation is coupled to the Chern-Simons density of an Abelian or non-Abelian gauge group. In the case of a non-Abelian gauge group, this can lead to the formation of a stable, homogeneous and isotropic gauge field background. We study the dynamics of the inflaton and gauge fields in terms of the two effective coupling parameters: the gauge coupling and the axion decay constant. Starting from the Bunch-Davies vacuum in the far past, we find that the non-trivial gauge field background arises only significantly after the cosmic microwave background (CMB) scales have left the horizon. At these scales, the model thus closely resembles Abelian axion inflation, thereby naturally reconciling the tension of non-Abelian axion gauge field inflation with the latest CMB observations. We further consider two exemplary UV-completions of this setup: multiple Peccei-Quinn axions and axion monodromy in string theory. In both cases we find that the majority of the parameter space is excluded by theoretical or observational constraints. The remaining parameter space can be divided into three regimes. (i) For small gauge couplings we recover natural inflation. For large gauge couplings the non-Abelian gauge theory either (ii) mimics the Abelian theory or (iii) non-linear interactions prohibit a linear analysis of the gauge field perturbations.
description: 32 pages, 8 figures, accepted for publication in JCAP
title: Oligo-1,6-Glocosidase enzyme of halothermothrix orenii
Creators: name: Chadha, Vipul
Publisher: name: Griffith University
Year: 2012
Subjects: subject: Halothermothrix orenii
subject: α-amylase coding genes
subject: Amy5
subject: rAmy5

description: Halothermothrix orenii, a gram negative strictly anaerobic thermohalophilic bacterium has been isolated from sediments of a Tunisian salt lake (Chott El Guettar). H. orenii grows optimally at 60˚C with 10% NaCl. Phylogenetically, H. orenii is placed at the base of phylum Firmicutes, in the family Haloanaerobiaceae, order Haloanaerobiales, and is the only member of this order whose genome has been completely sequenced. The availability of the genome sequence will not only enhance our understanding of survival and adaptation strategies of microbes living under dual extremities of high salt and temperature, but will also provide information on novel biocatalysts which could have potential application in research, industrial and bioremediation processes. To date, our laboratory has studied a large number of genes that encode Glycosyl Hydrolases and Transferases from H. orenii, including AmyA and AmyB of the α-amylase family 13, a sucrose phosphate synthase (SPS) and a Fructokinase (Frk). Biochemical analysis demonstrated that all these recombinant enzymes are optimally active between 55-65˚C and in addition, the extracellular amylases AmyA and AmyB are most active with NaCl concentration between 5-25%. All the recombinant enzymes have been crystallized and their structures solved, but their molecular basis of thermohalophilicity has yet to be determined. In the present study, data mining of the genome of H. orenii further identified six potential α-amylase coding genes (designated Amy1, Amy2, Amy5, Amy6, Amy7 and Amy8). Primers were designed for cloning and overexpression of these genes into two vectors, namely flexi pFN6A and pET22b (+). Clones of Amy1, Amy6, Amy7 and Amy8 were discarded from the freezer by a member of the plant laboratory in my school, and therefore only clones Amy2 and Amy5 were available for studies. Amy5 clone has been studied in detail and forms the basis of this thesis. [...]
Coelogyne quinquecallosa M. W. Chase & Schuit. 2021, comb. nov.
Creators: name: Chase, Mark W.
name: Gravendeel, Barbara
name: Sulistyo, Bobby P.
name: Wati, Richa Kusuma
name: Schuiteman, André
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Liliopsida
Asparagales
Orchidaceae
Coelogyne
Coelogyne quinquecallosa

description: Coelogyne quinquecallosa (H.A.Pedersen) M.W.Chase & Schuit., comb. nov.
 Basionym: Dendrochilum quinquecallosum H.A.Pedersen, Orchid Rev. 115: 223 (2007).
description: Published as part of Chase, Mark W., Gravendeel, Barbara, Sulistyo, Bobby P., Wati, Richa Kusuma & Schuiteman, André, 2021, Expansion of the orchid genus Coelogyne (Arethuseae; Epidendroideae) to include Bracisepalum, Bulleyia, Chelonistele, Dendrochilum, Dickasonia, Entomophobia, Geesinkorchis, Gynoglottis, Ischnogyne, Nabaluia, Neogyna, Otochilus, Panisea and Pholidota, pp. 94-134 in Phytotaxa 510 (2) on page 124, DOI: 10.11646/phytotaxa.510.2.1, http://zenodo.org/record/5426332
MAD-4-MITO, a Multi Array of Detectors for ground-based mm/submm SZ observations
Creators: name: Lamagna, L.
name: De Petris, M.
name: Melchiorri, F.
name: Battistelli, E.
name: De Grazia, M.
name: Luzzi, G.
name: Orlando, A.
name: Savini, G.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: The last few years have seen a large development of mm technology and ultra-sensitive detectors devoted to microwave astronomy and astrophysics. The possibility to deal with large numbers of these detectors assembled into multi--pixel imaging systems has greatly improved the performance of microwave observations, even from ground--based stations, especially combining the power of multi--band detectors with their new imaging capabilities. Hereafter, we will present the development of a multi--pixel solution devoted to Sunyaev--Zel'dovich observations from ground--based telescopes, that is going to be operated from the Millimetre and Infrared Testagrigia Observatory.
description: 5 pages, 3 figures, to be published in th eProceedings of the 2K1BC Workshop, July 9-13, 2001 - Breuil-Cervinia
Optimized Measures of Bipartite Quantum Correlation
Creators: name: Levin, Joshua
name: Smith, Graeme
Publisher: name: arXiv
Year: 2019
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: How can we characterize different types of correlation between quantum systems? Since correlations cannot be generated locally, we take any real function of a multipartite state which cannot increase under local operations to measure a correlation. Correlation measures that can be expressed as an optimization of a linear combination of entropies are particularly useful, since they can often be interpreted operationally. We systematically study such optimized linear entropic functions, and by enforcing monotonicity under local processing we identify four cones of correlation measures for bipartite quantum states. This yields two new optimized measures of bipartite quantum correlation that are particularly simple, which have the additional property of being additive.
description: 6 pages, 2 tables
Additional file 1: of Complement activation contributes to perioperative neurocognitive disorders in mice
Creators: name: Xiong, Chao
name: Liu, Jinhu
name: Lin, Dandan
name: Zhang, Juxia
name: Terrando, NiccolĂ˛
name: Wu, Anshi
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Molecular Biology
subject: Neuroscience
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Representative images of C3/NeuN double immunostaining show no detectable C3 in hippocampal neurons on day 1. (PDF 3770Â kb)
title: Face and Face Practices in Chinese Talk-in-Interaction: An Empirical Analysis of Business Interactions in Taiwan
Creators: name: Chang, Wei-Lin
Publisher: name: Griffith University
Year: 2013
Subjects: subject: Mianzi
subject: Face practices in Taiwan
subject: Taiwanese business settings

description: While face in academic discourse was firstly introduced by Goffman (1967), the notion of face was actually originally borrowed from the Chinese concept of mianzi. Face is thus an integral part of East-Asian cultures, particularly in Chinese society (Gao 1998, 2009; Ho 1976). Face has also been adopted as a means of examining various social phenomena, such as (im)politeness, conflict management, and impression management (Arundale 2006; Brown and Levinson 1987; Goffman 1967; Ting-Toomey 1988, 2005). This research aims to integrate emic and etic perspectives on face and face practices in Chinese (Chang and Haugh 2013), by examining how face is interactionally achieved and managed in actual Chinese institutional settings. This research builds on my previous honours dissertation (Chang 2008), which focused on interactional aspects of face in Taiwanese business settings. A key finding of that study was that it illustrated the significance of employing conversational analysis, rather than imposing theoretically-defined notions that may misrepresent face practices in interactional discourse (Chang and Haugh 2011b). However, to generalise from these findings of my honours dissertation requires larger and more diverse data sets. This research will pay particular attention to emic conceptualisations of face in Chinese and face practices, which to date have received only passing attention in the literature, in order to investigate how the participants interpret the actions and meanings in the course of the interaction in the business settings.
Coelogyne quisumbingiana M. W. Chase & Schuit. 2021, comb. nov.
Creators: name: Chase, Mark W.
name: Gravendeel, Barbara
name: Sulistyo, Bobby P.
name: Wati, Richa Kusuma
name: Schuiteman, André
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Liliopsida
Asparagales
Orchidaceae
Coelogyne
Coelogyne quisumbingiana

description: Coelogyne quisumbingiana (H.A.Pedersen) M.W.Chase & Schuit., comb. nov.
 Basionym: Dendrochilum quisumbingianum H.A.Pedersen, Nordic J. Bot. 15: 389 (1995 publ. 1996).
description: Published as part of Chase, Mark W., Gravendeel, Barbara, Sulistyo, Bobby P., Wati, Richa Kusuma & Schuiteman, André, 2021, Expansion of the orchid genus Coelogyne (Arethuseae; Epidendroideae) to include Bracisepalum, Bulleyia, Chelonistele, Dendrochilum, Dickasonia, Entomophobia, Geesinkorchis, Gynoglottis, Ischnogyne, Nabaluia, Neogyna, Otochilus, Panisea and Pholidota, pp. 94-134 in Phytotaxa 510 (2) on page 125, DOI: 10.11646/phytotaxa.510.2.1, http://zenodo.org/record/5426332
Additional file 1 of Unicompartmental knee arthroplasty is associated with lower pain levels but inferior range of motion, compared with high tibial osteotomy: a systematic overview of meta-analyses
Creators: name: Ping, Hangyu
name: Wen, Jiaxin
name: Liu, Yubo
name: Li, Haifeng
name: Wang, Xin
name: Kong, Xiangpeng
name: Chai, Wei
Publisher: name: figshare
Year: 2022
Subjects: subject: Physiology
subject: FOS: Biological sciences
subject: Chemical Sciences not elsewhere classified
subject: Science Policy
subject: Mental Health

description: Additional file 1. Chapter 1: Search strategy. Chapter 2: Additional Tables.
Antepipona rikatlensis
Creators: name: Gusenleitner, J.
Publisher: name: Zenodo
Year: 2012
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Eumenidae
Antepipona
Antepipona rikatlensis

description: Antepipona rikatlensis (VON SCHULTHESS 1914)
R. S. A.: Limpopo prov., 80 km E Lephatale, 1010m, 23°31’S 28°26’E, 15.12.200 9, 1, leg. J. Halada; W of Bothaville, Vaal riv., 28.10.200 8, 1, leg. M. Snižek, coll. OLM.
Bisher war diese Art nur aus Mozambique bekannt (CARPENTER et al. 2009).
description: Published as part of Gusenleitner, J., 2012, Über bemerkenswerte Faltenwespen aus der äthiopischen Region Teil 9 (Hymenoptera: Vespidae: Eumeninae), pp. 1159-1176 in Linzer biologische Beiträge 44 (2) on page 1168, DOI: 10.5281/zenodo.5329007
The Early Formation, Evolution and Age of the Neutron-Capture Elements in the Early Galaxy
Creators: name: Cowan, J. J.
name: Sneden, C.
name: Truran, J. W.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Abundance observations indicate the presence of rapid-neutron capture (i.e., r-process) elements in old Galactic halo and globular cluster stars. These observations demonstrate that the earliest generations of stars in the Galaxy, responsible for neutron-capture synthesis and the progenitors of the halo stars, were rapidly evolving. Abundance comparisons among several halo stars show that the heaviest neutron-capture elements (including Ba and heavier) are consistent with a scaled solar system r-process abundance distribution, while the lighter such elements do not conform to the solar pattern. These comparisons suggest two r-process sites or at least two different sets of astrophysical conditions. The large star-to-star scatter observed in the neutron-capture/iron ratios at low metallicities -- which disappears with increasing [Fe/H] -- suggests an early, chemically unmixed and inhomogeneous Galaxy. The stellar abundances indicate a change from the r-process to the slow neutron capture (i.e., s-) process at higher metallicities in the Galaxy. The detection of thorium in halo and globular cluster stars offers a promising, independent age-dating technique that can put lower limits on the age of the Galaxy.
description: 6 pages, 3 figures; To appear in the proceedings of the 20th Texas Symposium on Relativistic Astrophysics, J. C. Wheeler & H. Martel (eds.)
title: Towards Practical Ontology-based Data Access for Existential Rules
Creators: name: Xiao, Peng
Publisher: name: Griffith University
Year: 2021
Subjects: subject: Artificial Intelligence
subject: ontology-based data access
subject: OBDA
subject: knowledge reasoning

description: Nowadays, knowledge reasoning is gaining more attentions in Artificial Intelligence, which stimulates the development of modern information systems. As the key ingredient of new generation of information systems, ontology-based data access (OBDA), which employs domain-specific knowledge provided by an ontology to reason over data, has received considerable attention in recent years. However, current research on ontological reasoning is not sufficient to establish practical OBDA with regards to scalability, feasibility, and usability. The primary aim of this thesis is to promote the applications of OBDA, by addressing the typical limitations of several research problems that are important to the practicality of OBDA systems. In this thesis, we focus on studying these problems in existential rules, a prominent family of ontological languages that proves to be both expressive and tractable. Observing that current query rewriting techniques are not scalable over expressive ontologies, we propose a novel datalog rewriting approach for existential rules based on the notion of unfolding. While datalog rewritability cannot be guaranteed in general existential rules, we propose a novel abstract class called weakly-separable rules for datalog rewriting and show that it can generalize several combinations of existing well-accepted classes. We develop a prototype of query answering system called Drewer based on our proposed datalog rewriting method and evaluations show that our system has superior performance to state-of-the-art systems. While query answering is the essential reasoning task for OBDA, it is necessary to provide appropriate explanations to query answers. We study the problem of query abduction, which is the underlying problem of explaining negative query answers. To make the abduction process more user-oriented, we present a novel abduction framework that discriminates between predicates expressing high-level and low-level concepts. We also develop an efficient algorithm for its computation based on first-order rewriting in existential rules, which shows scalability over large databases in experiments. Forgetting is a well-known mechanism that can have a variety of potential applications to the manipulation of ontologies. However, current studies about forgetting cannot handle inconsistent ontologies, which hinders its applications to OBDA scenarios where errors of knowledge might occur. We present the first study of inconsistency-tolerant forgetting, that is, forgetting with the presence of inconsistencies. Three different definitions based on inconsistency-tolerant query answering are proposed and their rationality is illustrated by comparing to other possible solutions. We explored their properties and computation methods in a light-weight Description Logic language, DL-lite.core.
Antepipona senegalensis
Creators: name: Gusenleitner, J.
Publisher: name: Zenodo
Year: 2012
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Eumenidae
Antepipona
Antepipona senegalensis

description: Antepipona senegalensis (DE SAUSSURE 1853)
T a n z a n i a: Mbeya prov., 70 km NW Tunduma, 1500m, 8°58’S 32°25’E, 1, leg. M. Kadiecová; W of Kiberashi, Kit wel plain, 18.3.200 2, leg. M. Snižek, coll. OLM.
Aus Tanzania wurde diese Art bisher nicht gemeldet (CARPENTER et al. 2009).
description: Published as part of Gusenleitner, J., 2012, Über bemerkenswerte Faltenwespen aus der äthiopischen Region Teil 9 (Hymenoptera: Vespidae: Eumeninae), pp. 1159-1176 in Linzer biologische Beiträge 44 (2) on page 1168, DOI: 10.5281/zenodo.5329007
title: Ross River Virus Interaction with the Type I IFN Pathways
Creators: name: Liu, Xiang
Publisher: name: Griffith University
Year: 2016
Subjects: subject: Ross River virus
subject: Alphavirus
subject: Arthralgia
subject: Arthritis
subject: Myalgia
subject: Type I IFN Pathways

description: Ross River virus (RRV) belongs to the genus Alphavirus and is a medically important arbovirus that causes musculoskeletal disease in humans with symptoms such as arthralgia, arthritis and myalgia. Disease symptoms consistent with RRV infection were first recorded in 1928 in Australia. Currently, with approximately 5,000 cases of RRV infection reported each year in Australia, RRV is the most widely spread arbovirus throughout the South Pacific region. At present there are no specific therapeutics or vaccines available. RRV disease is treated with analgesics and non-steroidal anti-inflammatory drugs to provide symptomatic relief. Therefore, it is important to investigate RRV disease mechanisms so as to better understand disease pathogenesis, which could lead to identifying potential targets for therapeutic intervention. The host Type I interferon (IFN) system is the primary innate antiviral defence mechanism. The antiviral effects of type I IFN act to both suppress viral replication and modulate innate and adaptive immune responses during viral infection. However, the interplay between the host type I IFN responses and alphavirus infection is currently poorly understood. This thesis focuses on the role of type I IFN system in RRV infection and disease pathogenesis.
Thermodynamic Neural Network
Creators: name: Hylton, Todd
Publisher: name: arXiv
Year: 2019
Subjects: subject: Neurons and Cognition (q-bio.NC)
subject: Physics and Society (physics.soc-ph)
subject: FOS: Biological sciences
subject: FOS: Physical sciences

description: A thermodynamically motivated neural network model is described that self-organizes to transport charge associated with internal and external potentials while in contact with a thermal reservoir. The model integrates techniques for rapid, large-scale, reversible, conservative equilibration of node states and slow, small-scale, irreversible, dissipative adaptation of the edge states as a means to create multiscale order. All interactions in the network are local and the network structures can be generic and recurrent. Isolated networks show multiscale dynamics, and externally driven networks evolve to efficiently connect external positive and negative potentials. The model integrates concepts of conservation, potentiation, fluctuation, dissipation, adaptation, equilibration and causation to illustrate the thermodynamic evolution of organization in open systems. A key conclusion of the work is that the transport and dissipation of conserved physical quantities drives the self-organization of open thermodynamic systems.
description: 26 pages, 16 figures
Coelogyne ramentacea M. W. Chase & Schuit. 2021, comb. nov.
Creators: name: Chase, Mark W.
name: Gravendeel, Barbara
name: Sulistyo, Bobby P.
name: Wati, Richa Kusuma
name: Schuiteman, André
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Liliopsida
Asparagales
Orchidaceae
Coelogyne
Coelogyne ramentacea

description: Coelogyne ramentacea (J.J.Wood) M.W.Chase & Schuit., comb. nov.
 Basionym: Chelonistele ramentacea J.J.Wood, Kew Bull. 39: 80 (1984).
description: Published as part of Chase, Mark W., Gravendeel, Barbara, Sulistyo, Bobby P., Wati, Richa Kusuma & Schuiteman, André, 2021, Expansion of the orchid genus Coelogyne (Arethuseae; Epidendroideae) to include Bracisepalum, Bulleyia, Chelonistele, Dendrochilum, Dickasonia, Entomophobia, Geesinkorchis, Gynoglottis, Ischnogyne, Nabaluia, Neogyna, Otochilus, Panisea and Pholidota, pp. 94-134 in Phytotaxa 510 (2) on page 125, DOI: 10.11646/phytotaxa.510.2.1, http://zenodo.org/record/5426332
Additional file 3 of Comparative metabolomic analysis reveals shared and unique chemical interactions in sponge holobionts
Creators: name: Zhang, Shan
name: Song, Weizhi
name: Nothias, Louis-Félix
name: Couvillion, Sneha P.
name: Webster, Nicole
name: Thomas, Torsten
Publisher: name: figshare
Year: 2022
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 2: Figure S2. Number of common and unique sponge-produced natural metabolites from the MarinLit database for each sponge species. CAR: C. foliascens; CLI: C. orientalis; COS: C. matthewsi; IRC: I. ramosa; PER: P. heteroaphis; STY: S. flabelliformis.
COVID-19 vaccine hesitancy among low-income, racially and ethnically diverse US parents
Creators: name: Schilling, Samantha
name: Delamater, Alan M
name: Heerman, William J
name: Yin, H Shonna
name: Sanders, Lee
name: Rothman, Russell L
name: Orr, Colin J
name: Perrin, Eliana M
name: Flower, Kori B
Publisher: name: Elsevier
Year: 2022

description:
OBJECTIVE: Examine factors impacting U.S. parents' intention to vaccinate their children against COVID-19. METHODS: Data were collected February-May 2021 from parents living in six geographically diverse locations. The COVID-19 Exposure and Family Impact Survey assessed perceived susceptibility and severity to adverse outcomes from the pandemic. Semi-structured interviews assessed perceptions about benefits and risks of vaccinating children. RESULTS: Fifty parents of 106 children (newborn-17 years) were included; half were Spanish-speaking and half English-speaking. 62% were hesitant about vaccinating their children against COVID-19. Efficacy and safety were the main themes that emerged: some parents perceived them as benefits while others perceived them as risks to vaccination. Parent hesitancy often relied on social media, and was influenced by narrative accounts of vaccination experiences. Many cited the lower risk of negative outcomes from COVID-19 among children, when compared with adults. Some also cited inaccurate and constantly changing information about COVID-19 vaccines. CONCLUSION: Main drivers of parent hesitancy regarding child COVID-19 vaccination include perceived safety and efficacy of the vaccines and lower severity of illness in children. PRACTICE IMPLICATIONS: Many vaccine-hesitant parents may be open to vaccination in the future and welcome additional discussion and data.
Environmental and biological monitoring of benzene, toluene, ethylbenzene and xylene (BTEX) exposure in residents living near gas stations
Creators: name: Barros, Nelson
name: Carvalho, Márcia
name: Silva, Cláudia
name: Fontes, Tânia
name: Prata, Joana C.
name: Sousa, André
name: M. Conceição Manso
Publisher: name: Taylor & Francis
Year: 2019
Subjects: subject: Cell Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Science Policy
subject: Plant Biology

description: The volatile organic compounds benzene, toluene, ethylbenzene, and xylene (BTEX) are emitted into the atmosphere at gas stations (GS) leading to chronic exposure of nearby residents, which raises public health concerns. This study aimes at determining the contribution of GS emissions to BTEX exposure in nearby residents. Three Control and Exposed areas to BTEX emissions from GS were defined in a medium-sized European city (Porto, Portugal). BTEX atmospheric levels were determined in Control and Exposed areas using passive samplers deployed outdoors (n = 48) and indoors (n = 36), and human exposure was estimated for 119 non-smoking residents using the first urine of the day. Results showed that median BTEX outdoor and indoor concentrations were significantly higher for Exposed than Control areas, with exception of ethylbenzene and xylene indoor concentrations, where no marked differences were found. Comparison of urinary concentrations between Exposed and Control residents demonstrated no significant differences for benzene and ethylbenzene, whereas levels of toluene and xylene were significantly higher in Exposed residents. No marked correlation was obtained between atmospheric BTEX concentrations and urinary concentrations. Data indicate the potential impact on air quality of BTEX emissions from GS, which confirms the importance of these findings in urban planning in order to minimize the impact on health and well-being of surrounding populations.
Revised analysis of the supersoft X-ray phase, helium enrichment, and turn-off time in the 2000 outburst of recurrent nova CI Aquilae
Creators: name: Hachisu, Izumi
name: Kato, Mariko
name: Schaefer, Bradley E.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Recurrent nova CI Aquilae has entered the final decline phase a bit before May of 2001, about 300 days after the optical maximum, showing the slowest evolution among recurrent novae. Based on the optically thick wind mass-loss theory of the thermonuclear runaway model, we have estimated the turn-off time of the CI Aql 2000 outburst. It is in late March of 2001 after a luminous supersoft X-ray source phase lasts 150 days (from November of 2000 until March of 2001). We have also obtained, by fitting our theoretical light curves with the 1917 and 2000 outbursts, the white dwarf (WD) mass to be M_{WD}= 1.2 \pm 0.05 M_\sun, the helium enrichment of the envelope is He/H = 0.5 by number, the mass of the hydrogen-rich envelope on the WD at the optical maximum is ΔM_{max} = 8.0 x 10^{-6} M_\sun, and the average mass accretion rate is \dot M_{acc}= 1.0 x 10^{-7} M_\sun/yr during the quiescent phase between the 1917 and 2000 outbursts. Using these obtained values, we have consistently reproduced the light curve in quiescence as well as of the two outbursts. We have also discussed the possibility whether or not CI Aql will explode as a Type Ia supernova in a future.
description: 16 pages including 9 figures, to appear in the Astrophysical Journal
The Afterglow and the Host Galaxy of the Dark Burst GRB 970828
Creators: name: Djorgovski, S. G.
name: Frail, D. A.
name: Kulkarni, S. R.
name: Bloom, J. S.
name: Odewahn, S. C.
name: Diercks, A.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: GRB 970828 was the first well-localized gamma-ray burst (GRB) X-ray afterglow for which no optical afterglow was found despite a prompt, deep search down to R_lim ~ 24.5 mag. We report the discovery of a short-lived radio flare within the X-ray localization error circle of this burst. Such radio flares are seen in about 25% of GRB afterglows and their origin is not well understood. The precise radio position enabled us to identify the likely host galaxy of this burst, and to measure its redshift, z = 0.9578. The host appears to be an interacting/merging system. Under the assumption that the X-ray afterglow is mainly due to synchrotron mechanism we infer the optical afterglow flux. The observed upper limits to the optical flux are easily explained by invoking an intervening dusty cloud within the host galaxy. These observations support the idea that GRBs with no detectable optical afterglows or "dark GRBs" can be due to dust extinction within the host galaxies. The census of dark GRBs can then be used to constrain the fraction of the obscured star formation in the universe. We argue that the existing data already indicate that the obscured star-formation rate is no more than 1/2 of that seen at UV and optical wavelengths.
description: Submitted to The Astrophysical Journal. LaTeX file, 27 pages, including 7 postscript figures; AASTeX style files included
Antepipona stevensoniana
Creators: name: Gusenleitner, J.
Publisher: name: Zenodo
Year: 2012
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Eumenidae
Antepipona
Antepipona stevensoniana

description: Antepipona stevensoniana (GIORDANI SOIKA 1963)
C e n t r a l A f r i c a n R e p u b l i k: 70 km NNE Bamingui, 430m, 4°57’N 18°46’E, 8.4.201 0, 1, leg. J. Halada; 45 km SSW Bamingui, 7°15’N 20°03’E, 14.5.200 9, 1, leg. J. Halada, coll. OLM.
N a m i b i a: Rundu, 22.1.199 3, 1; 22.1.1993, 1; 29.1.199 3, 1; 31.1.199 3, 1; 40 km E Rundu, 21.1.199 3, alle leg. et coll. m; Kavangogeb. 1, Rundu, 10.3.199 0, 1; Rundu, 29.1.199 3, 1, beide leg. M. Schwarz, coll. m.
N i g e r i a: 26 km SSE Abuja, 9°06’N 7°45’E, 400m, 14.5.201 1, 1, leg. J. Halada, coll. OLM.
S e n e g a l: 70 km W Tambacounda, 13°57,39’N 14°15,92’W, 29.8.200 4, 1, leg. Marek Halada; Niokolo Koba NP., 13.- 17.7.2004, 1, leg. A. Kudrna, coll. OLM.
Z a m b i a: 25 km E Lusaka, 15°21’S 28°30’E, 3.3.199 5, 1, leg. W. J. Pulawski, coll. m.
R. S. A.: Limpopo, Thabazimbi, 21.12.200 8, 1, leg. Snižek, coll. OLM.
Bisher war diese Art nur aus Kenia, Malawi, Tanzania und Zimbabwe bekannt (CARPENTER et al. 2009).
description: Published as part of Gusenleitner, J., 2012, Über bemerkenswerte Faltenwespen aus der äthiopischen Region Teil 9 (Hymenoptera: Vespidae: Eumeninae), pp. 1159-1176 in Linzer biologische Beiträge 44 (2) on page 1168, DOI: 10.5281/zenodo.5329007
The RWST, a comprehensive statistical description of the non-Gaussian structures in the ISM
Creators: name: Allys, E.
name: Levrier, F.
name: Zhang, S.
name: Colling, C.
name: Blancard, B. Regaldo-Saint
name: Boulanger, F.
name: Hennebelle, P.
name: Mallat, S.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Data Analysis, Statistics and Probability (physics.data-an)
subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences

description: The interstellar medium (ISM) is a complex non-linear system governed by gravity and magneto-hydrodynamics, as well as radiative, thermodynamical, and chemical processes. Our understanding of it mostly progresses through observations and numerical simulations, and a quantitative comparison between these two approaches requires a generic and comprehensive statistical description. The goal of this paper is to build such a description, with the purpose to permit an efficient comparison independent of any specific prior or model. We start from the Wavelet Scattering Transform (WST), a low-variance statistical description of non-Gaussian processes, developed in data science, that encodes long-range interactions through a hierarchical multiscale approach based on the Wavelet transform. We perform a reduction of the WST through a fit of its angular dependencies, allowing to gather most of the information it contains into a few components whose physical meanings are identified, and that describe, e.g., isotropic and anisotropic behaviours. The result of this paper is the Reduced Wavelet Scattering Transform (RWST), a statistical description with a small number of coefficients that characterizes complex structures arising from non-linear phenomena, free from any specific prior. The RWST coefficients encode moments of order up to four, have reduced variances, and quantify the couplings between scales. To show the efficiency and generality of this description, we apply it successfully to three kinds of processes: fractional Brownian motions, MHD simulations, and Herschel observations in a molecular cloud. With fewer than 100 coefficients when probing 6 scales and 8 angles on 256*256 maps, we were able with the RWST to perform quantitative comparisons, to infer relevant physical properties, and to produce realistic synthetic fields.
description: V2. Matches version published in A&A
Additional file 7 of TNFAIP6 defines the MSC subpopulation with enhanced immune suppression activities
Creators: name: Li, Lingyun
name: Yang, Lei
name: Chen, Xian
name: Chen, Xiangjuan
name: Diao, Lianghui
name: Zeng, Yong
name: Xu, Jianyong
Publisher: name: figshare
Year: 2022
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 7: Figure 1. Plotting of MSC negative marker genes.
A molecular-line study of clumps with embedded high-mass protostar candidates
Creators: name: Brand, J.
name: Cesaroni, R.
name: Palla, F.
name: Molinari, S.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present molecular line observations made with the IRAM 30-m telescope of the immediate surroundings of a sample of 11 candidate high-mass protostars. These observations are part of an effort to clarify the evolutionary status of a set of objects which we consider to be precursors of UC HII regions. We find that the present data are consistent with such an interpretation. The sources have FIR luminosities indicating the presence of B2.5 to O8.5V0 stars, are associated with dense gas and dust, have (sub-)mm continuum spectra indicating temperatures of ca. 30K, and have no detectable radio continuum emission. All observed sources are associated with well-defined molecular clumps. Masses, sizes, and other parameters depend on the tracer used, but typically the cores have average diameters of ca. 0.5-1 pc, and masses of a few tens to a few thousand solar masses. Compared to a similar analysis of sources which are mostly identifyable with UC HII regions, the present sample has molecular clumps that are more massive, larger, cooler, and less turbulent. They also tend to have a smaller ratio of virial-to-luminous mass, indicating they are less dynamically stable than their counterparts embedded in the UC HII-like sources. The large sizes suggest these clumps should still undergo substantial contraction. The lower temperatures and small linewidths are also expected in objects in an earlier evolutionary state. We find that the masses of the molecular clumps associated with our objects increase with Lfir [M(clump) propto Lfir^(1.17)], and that there is a (weak) relation between the clump mass and the mass of the embedded protostellar object M(proto) propto M(clump)^(0.30).
description: 18 pages, 25 figures, A&A in press
Coelogyne ramosissima M. W. Chase & Schuit. 2021, comb. nov.
Creators: name: Chase, Mark W.
name: Gravendeel, Barbara
name: Sulistyo, Bobby P.
name: Wati, Richa Kusuma
name: Schuiteman, André
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Liliopsida
Asparagales
Orchidaceae
Coelogyne
Coelogyne ramosissima

description: Coelogyne ramosissima (Ridl.) M.W.Chase & Schuit., comb. nov.
 Basionym: Platyclinis ramosissima Ridl., J. Fed. Malay States Mus. 8(4): 89 (1917).
 Homotypic synonym: Dendrochilum ramosissimum (Ridl.) J.J.Sm., Bull. Jard. Bot. Buitenzorg, sér. 3, 5: 37 (1922).
description: Published as part of Chase, Mark W., Gravendeel, Barbara, Sulistyo, Bobby P., Wati, Richa Kusuma & Schuiteman, André, 2021, Expansion of the orchid genus Coelogyne (Arethuseae; Epidendroideae) to include Bracisepalum, Bulleyia, Chelonistele, Dendrochilum, Dickasonia, Entomophobia, Geesinkorchis, Gynoglottis, Ischnogyne, Nabaluia, Neogyna, Otochilus, Panisea and Pholidota, pp. 94-134 in Phytotaxa 510 (2) on page 125, DOI: 10.11646/phytotaxa.510.2.1, http://zenodo.org/record/5426332