cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Pseudoanthidium pictipes
Creators: name: Kasparek, Max
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Megachilidae
Pseudoanthidium
Pseudoanthidium pictipes

description: Pseudoanthidium pictipes (Morawitz, 1894)
 Material. Holotype male, Darch, Tajikistan, 11 Aug 1898 (?) [date not clearly readable on label]. D. K. Glasunow leg. (fide Morawitz 1894) (ZISP). Drawing of the apical tergum in Mavromoustakis (1954b). Examined by photographs.
The male is characterised by a long T7 with a deep, U-shaped emargination which is widened distally shortly before the apex. Lateral hook on T6 absent.
 Male (Fig. 11). 7 mm. Head: Head black with small postocular yellow spot; clypeus black; mandible yellow with three black teeth (transition zone reddish brown); face with long silvery hairs.
 Mesosoma: Black with dense, long pubescence.
 Metasoma: T1-T6 with yellow lateral bands nearly reaching the middle (according to Morawitz 1894, T1 with lateral bands, T2-T5 with continuous band attenuated in the middle); yellow bands attenuated inwards; T6 with crescent-shaped yellow maculation on both sides of the middle, bulging mediolaterally; T7 black, with deep V-shaped incision; incision with a shallow, step-like broadening in the outer third; S 3 with a set of long hairs with curved, hooked and waved apices (as in other species of the genus) (Fig. 12); S 6 (not S 4 as in Morawitz 1894) convex and bilobed; legs black, femora with yellow apices and inner faces of tibiae and metatarsi yellow.
Popov (1950) mentioned that the male genitalia of this species are „aberrant” whereby he apparently meant that they are different from those of congeners, but without describing the differences. The holotype is dissected, but the male genitalia are not available for examination.
 Female: Not known.
 Distribution. Tajikistan (Fig. 15). The only known locality “Darch” seems to be situated in Zeravshan (Serafschan) Valley in Panjakent District close to the border with Uzbekistan.
 Remark: The species is erroneously assigned to Pseudoanthidium (Pseudoanthidium) in Discover Life (Ascher & Pickering 2019).
description: Published as part of Kasparek, Max, 2021, The bee genus Pseudoanthidium: revision of the subgenus Exanthidium with the description of a new species (Apoidea: Megachilidae), pp. 333-346 in Fragmenta entomologica 53 (2) on page 341, DOI: 10.13133/2284-4880/525, http://zenodo.org/record/12763456
Additional file 1 of Effect of important modifiers on harmful effects in evidence synthesis practice of adverse events were insufficiently investigated: an empirical investigation
Creators: name: Zhou, Xiaoqin
name: Yang, Xi
name: Cai, Fei
name: Wang, Li
name: Xu, Chang
name: Jia, Pengli
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Pharmacology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Additional file 1.  Protocol
Supplementary_material_-_MMSE_-_MoCA_-_English_versions – Supplemental material for Performance on the mini-mental state exam and the Montreal cognitive assessment in a sample of old age psychiatric patients
Creators: name: Korsnes, Maria Stylianou
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: Cardiology
subject: 110599 Dentistry not elsewhere classified
subject: FOS: Clinical medicine
subject: 110305 Emergency Medicine
subject: 110306 Endocrinology
subject: 110308 Geriatrics and Gerontology
subject: 110904 Neurology and Neuromuscular Diseases
subject: 111099 Nursing not elsewhere classified
subject: 111199 Nutrition and Dietetics not elsewhere classified
subject: 111299 Oncology and Carcinogenesis not elsewhere classified
subject: 110314 Orthopaedics
subject: 110604 Sports Medicine
subject: 110315 Otorhinolaryngology
subject: 111702 Aged Health Care
subject: 111403 Paediatrics
subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: 110319 Psychiatry (incl. Psychotherapy)
subject: 111799 Public Health and Health Services not elsewhere classified
subject: 110203 Respiratory Diseases
subject: 160807 Sociological Methodology and Research Methods
subject: FOS: Sociology
subject: 110323 Surgery
subject: 70706 Veterinary Medicine
subject: FOS: Veterinary sciences

description: Supplemental material, Supplementary_material_-_MMSE_-_MoCA_-_English_versions for Performance on the mini-mental state exam and the Montreal cognitive assessment in a sample of old age psychiatric patients by Maria Stylianou Korsnes in SAGE Open Medicine
Additional file 3 of Effect of important modifiers on harmful effects in evidence synthesis practice of adverse events were insufficiently investigated: an empirical investigation
Creators: name: Zhou, Xiaoqin
name: Yang, Xi
name: Cai, Fei
name: Wang, Li
name: Xu, Chang
name: Jia, Pengli
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Pharmacology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Additional file 3: Table S1. Investigation of the impact of effect modifiers on harmful effects in eligible systematic reviews (N=279)
Leveraging the Asia-Pacific context to advance management research
Creators: name: Pattnaik, C
name: Ang, Siah
name: Tang, J
Publisher: name: Open Access Te Herenga Waka-Victoria University of Wellington
Year: 2025
Subjects: classificationCode: 3507
subject: Strategy, management and organisational behaviour
classificationCode: 35
subject: Commerce, management, tourism and services
classificationCode: 3505
subject: Human resources and industrial relations

description: The Asia Pacific Journal of Management (APJM) has been instrumental in advancing management research specific to the Asia-Pacific region for four decades. This article underscores the importance of leveraging the unique contextual features of the Asia-Pacific region to enrich and refine management theories. Traditional management theories, often rooted in Western contexts, may not fully capture the complexities of the Asia-Pacific region’s diverse and dynamic environment. The article highlights the need for context-specific research that considers the region’s economic, institutional, and cultural diversity. It calls for a deeper exploration of under-researched areas of management. By contextualizing existing theories and developing new ones grounded in the Asia-Pacific context, the Asia Pacific Journal of Management aims to provide valuable insights for both scholars and practitioners. The editorial also outlines the journal’s vision to promote diverse perspectives, encourage submissions from underrepresented contexts, and celebrate contributions that significantly advance the understanding of management in the Asia-Pacific region.
Appendix_PDF – Supplemental material for Automated Insulin Delivery in Real Life (AID-IRL): Real-World User Perspectives on Commercial AID
Creators: name: Lewis, Dana
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: 110306 Endocrinology
subject: FOS: Clinical medicine
subject: Medicine
subject: 111199 Nutrition and Dietetics not elsewhere classified

description: Supplemental material, Appendix_PDF for Automated Insulin Delivery in Real Life (AID-IRL): Real-World User Perspectives on Commercial AID by Dana Lewis in Journal of Diabetes Science and Technology
Supplemental Material, DS_10.1177_2325967120950040 - Outcome Measures After Shoulder Stabilization in the Athletic Population: A Systematic Review of Clinical and Patient-Reported Metrics
Creators: name: Fanning, Edel
name: Maher, Natasha
name: Cools, Ann
name: Eanna C. Falvey
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 110314 Orthopaedics
subject: FOS: Clinical medicine
subject: 110604 Sports Medicine
subject: FOS: Health sciences

description: Supplemental Material, DS_10.1177_2325967120950040 for Outcome Measures After Shoulder Stabilization in the Athletic Population: A Systematic Review of Clinical and Patient-Reported Metrics by Edel Fanning, Natasha Maher, Ann Cools and Eanna C. Falvey in Orthopaedic Journal of Sports Medicine
sj-pdf-1-ijj-10.1177_0306419020958100 - Supplemental material for Remote practicals in the time of coronavirus, a multidisciplinary approach
Creators: name: K Bangert
name: J Bates
name: SBM Beck
name: ZK Bishop
name: M Di Benedetti
name: J Fullwood
name: AC Funnell
name: A Garrard
name: SA Hayes
name: T Howard
name: C Johnson
name: MR Jones
name: P Lazari
name: J Mukherjee
name: C Omar
name: BP Taylor
name: RMS Thorley
name: GL Williams
name: R Woolley
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 99999 Engineering not elsewhere classified
subject: FOS: Other engineering and technologies

description: Supplemental material, sj-pdf-1-ijj-10.1177_0306419020958100 for Remote practicals in the time of coronavirus, a multidisciplinary approach by K Bangert, J Bates, SBM Beck, ZK Bishop, M Di Benedetti, J Fullwood, AC Funnell, A Garrard, SA Hayes, T Howard, C Johnson, MR Jones, P Lazari, J Mukherjee, C Omar, BP Taylor, RMS Thorley, GL Williams and R Woolley in International Journal of Mechanical Engineering Education
Tracing the bottom electroweak dipole operators at future lepton colliders
Creators: name: Gu, Jiayin
name: Guo, Jiayu
name: Tan, Xiaoze
Publisher: name: Deutsches Elektronen-Synchrotron, DESY, Hamburg
Year: 2024

description: While often omitted in the SMEFT analyses of electroweak measurements, the electroweak dipole operators of the bottom quark have been found to be important in some cases, and are also related to processes involving the top quark. In this paper, we further investigate their effects, focusing on the measurements of the $e^+e^-\to b\bar{b}$ process at a future lepton collider. Their linear contributions are suppressed by the bottom mass due to the helicity flip in the interference term with the SM amplitude, leading to a nontrivial interplay between the linear and the quadratic contributions. With two runs at the Z-pole and 240 GeV, the effects of CP-even dipole coefficients can be well separated from the modifications of the SM $Zb\bar{b}$ couplings, while an additional run (e.g. at 360 GeV) is useful for lifting a nontrivial second best-fit point due to the quadratic contributions. The dipole operators also offer an alternative explanation to the long-standing $A^{0,b}_{\rm FB}$ discrepancy at LEP, which can be tested at a future lepton collider.
Structural Insights into Endobiotic Reactivation by Human Gut Microbiome-Encoded Sulfatases
Creators: name: Lim, Lauren
name: Redinbo, Matthew R.
name: Walton, William G.
name: Gharaibeh, Raad Z.
name: Simpson, Joshua B.
name: Creekmore, Benjamin C.
name: Gibbs, Morgan E.
name: Ervin, Samantha M.
Publisher: name: American Chemical Society (ACS)
Year: 2020

description: Phase II drug metabolism inactivates xenobiotics and endobiotics through the addition of either a glucuronic acid or sulfate moiety prior to excretion, often via the gastrointestinal tract. While the human gut microbial β-glucuronidase enzymes that reactivate glucuronide conjugates in the intestines are becoming well characterized and even controlled by targeted inhibitors, the sulfatases encoded by the human gut microbiome have not been comprehensively examined. Gut microbial sulfatases are poised to reactivate xenobiotics and endobiotics, which are then capable of undergoing enterohepatic recirculation or exerting local effects on the gut epithelium. Here, using protein structure-guided methods, we identify 728 distinct microbiome-encoded sulfatase proteins from the 4.8 million unique proteins present in the Human Microbiome Project Stool Sample database and 1766 gut microbial sulfatases from the 9.9 million sequences in the Integrated Gene Catalogue. We purify a representative set of these sulfatases, elucidate crystal structures, and pinpoint unique structural motifs essential to endobiotic sulfate processing. Gut microbial sulfatases differentially process sulfated forms of the neurotransmitters serotonin and dopamine, and the hormones melatonin, estrone, dehydroepiandrosterone, and thyroxine in a manner dependent both on variabilities in active site architecture and on markedly distinct oligomeric states. Taken together, these data provide initial insights into the structural and functional diversity of gut microbial sulfatases, providing a path toward defining the roles these enzymes play in health and disease.
sumatrana species group of the genus Platyja with descriptions of four new species (Lepidoptera: Erebidae)
Creators: name: Zilli, Alberto
name: De Vos, Rob
Publisher: name: Fragmenta entomologica
Year: 2021

description: It is shown that under the old concept of Platyja cyanocraspis Hampson, 1922 at least six species are intermingled, including two sympatric sibling ones from New Guinea. Four such species are new to science and are herein described, namely Platyja subtracta sp. n. (New Guinea), P. togutila sp. n. (Halmahera), P. vityaz sp. n. (Bismarck Archipelago) and P. yaleyambae sp. n. (Louisiades), while a fifth one from Buru and Ceram is upgraded from subspecific status as P. lecerfi A.E. Prout, 1922 stat. n. A singleton from New Britain (Bismarck Archipelago) closely albeit not entirely matching P. vityaz is also discussed.
description: Fragmenta entomologica, Vol. 53 No. 2 (2021)
Fig.-S1B.DPI_300 – Supplemental material for Association of central arterial stiffness with the presence and severity of diabetic retinopathy in Asians with type 2 diabetes
Creators: name: Zhang, Xiao
name: Chi Lim, Su
name: Tavintharan, Subramaniam
name: Yeoh, Lee Ying
name: Fang Sum, Chee
name: Ang, Keven
name: Yeo, Darren
name: Low, Serena
name: Kumari, Neelam
Publisher: name: SAGE Journals
Year: 2019
Subjects: Cardiology
Endocrinology
Nutrition and Dietetics not elsewhere classified
Surgery

description: Supplemental material, Fig.-S1B.DPI_300 for Association of central arterial stiffness with the presence and severity of diabetic retinopathy in Asians with type 2 diabetes by Xiao Zhang, Su Chi Lim, Subramaniam Tavintharan, Lee Ying Yeoh, Chee Fang Sum, Keven Ang, Darren Yeo, Serena Low and Neelam Kumari in Diabetes & Vascular Disease Research
Supplementary_file_1 – Supplemental material for Potential Interactions of Biologically Based Complementary Medicine in Gynecological Oncology
Creators: name: Loisa Drozdoff
name: Klein, Evelyn
name: Kalder, Matthias
name: Brambs, Christine
name: Kiechle, Marion
name: Paepke, Daniela
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: 110306 Endocrinology
subject: FOS: Clinical medicine
subject: 111299 Oncology and Carcinogenesis not elsewhere classified
subject: 111702 Aged Health Care

description: Supplemental material, Supplementary_file_1 for Potential Interactions of Biologically Based Complementary Medicine in Gynecological Oncology by Loisa Drozdoff, Evelyn Klein, Matthias Kalder, Christine Brambs, Marion Kiechle and Daniela Paepke in Integrative Cancer Therapies
Supplementary document for Three Types of Third-order Non-Hermitian Interaction of Spontaneous Six-wave and Eight-wave Mixing Using Multi-dressing Quantization - 7191653.pdf
Creators: name: Yang, Qinyue
name: Chen, Qingyu
name: zhuang, rui
name: Feng, Fang
name: Cai, Yin
name: Wang, Jindong
name: Zhang, Yanpeng
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: Appendix for manuscript 534955
Structured sparsity regularized multiple kernel learning for Alzheimer's disease diagnosis
Creators: name: An, Le
name: Shen, Dinggang
name: Peng, Jialin
name: Wang, Ye
name: Zhu, Xiaofeng
Publisher: name: Elsevier
Year: 2018

description: Multimodal data fusion has shown great advantages in uncovering information that could be overlooked by using single modality. In this paper, we consider the integration of high-dimensional multi-modality imaging and genetic data for Alzheimer's disease (AD) diagnosis. With a focus on taking advantage of both phenotype and genotype information, a novel structured sparsity, defined by ℓ1, p-norm (p > 1), regularized multiple kernel learning method is designed. Specifically, to facilitate structured feature selection and fusion from heterogeneous modalities and also capture feature-wise importance, we represent each feature with a distinct kernel as a basis, followed by grouping the kernels according to modalities. Then, an optimally combined kernel presentation of multimodal features is learned in a data-driven approach. Contrary to the Group Lasso (i.e., ℓ2, 1-norm penalty) which performs sparse group selection, the proposed regularizer enforced on kernel weights is to sparsely select concise feature set within each homogenous group and fuse the heterogeneous feature groups by taking advantage of dense norms. We have evaluated our method using data of subjects from Alzheimer's Disease Neuroimaging Initiative (ADNI) database. The effectiveness of the method is demonstrated by the clearly improved prediction diagnosis and also the discovered brain regions and SNPs relevant to AD.
Supplementary document for Experimental study on the application of Fresnel zone plate in scattering-type scanning near-field optical microscope - 7192166.pdf
Creators: name: Liu, Qiang
name: Deng, Yuanhao
name: Wang, Longda
name: Wu, Yunpeng
name: Wang, Junli
name: Liu, Wenshuai
name: Yao, Xiaomin
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: Supplement 1
Structural basis of paralog-specific KDM2A/B nucleosome recognition
Creators: name: Skrajna, Aleksandra
name: Kireev, Dmitri
name: Foley, Caroline A.
name: Budziszewski, Gabrielle R.
name: James, Lindsey I.
name: Arteaga, Eyla C.
name: Spangler, Cathy J.
name: McPherson, Jeanne-Marie E.
name: Wilkerson, Emily M.
name: Azzam, Dalal N.
name: Nguyen, Anh
name: McGinty, Robert K.
name: Frye, Stephen V.
name: Wesley, Nathaniel A.
name: Simmons, Holly C.
name: Goldfarb, Dennis
name: Smith, Charlotte B.
Publisher: name: Springer Nature
Year: 2023

description: The nucleosome acidic patch is a major interaction hub for chromatin, providing a platform for enzymes to dock and orient for nucleosome-targeted activities. To define the molecular basis of acidic patch recognition proteome wide, we performed an amino acid resolution acidic patch interactome screen. We discovered that the histone H3 lysine 36 (H3K36) demethylase KDM2A, but not its closely related paralog, KDM2B, requires the acidic patch for nucleosome binding. Despite fundamental roles in transcriptional repression in health and disease, the molecular mechanisms governing nucleosome substrate specificity of KDM2A/B, or any related JumonjiC (JmjC) domain lysine demethylase, remain unclear. We used a covalent conjugate between H3K36 and a demethylase inhibitor to solve cryogenic electron microscopy structures of KDM2A and KDM2B trapped in action on a nucleosome substrate. Our structures show that KDM2-nucleosome binding is paralog specific and facilitated by dynamic nucleosomal DNA unwrapping and histone charge shielding that mobilize the H3K36 sequence for demethylation.
bee genus Pseudoanthidium: revision of the subgenus Exanthidium with the description of a new species (Apoidea: Megachilidae)
Creators: name: Kasparek, Max
Publisher: name: Fragmenta entomologica
Year: 2021

description: Exanthidium Pasteels, 1969 is today recognised as a subgenus of the genus Pseudoanthidium which comprises a small number of little-known species distributed between the Atlantic coast and Central Asia. The taxonomic status is reviewed and the members of the subgenus are here presented for the first time with photographs and line drawings illustrating the specific distinguishing characters. An identification key and distribution maps are given. A new species, Pseudoanthidium (Exanthidium) deserticolum sp. n. is described from Saudi Arabia. It is close to P. (E.) wahrmanicum which is found in the southern Levant and the Algerian Sahara.
description: Fragmenta entomologica, Vol. 53 No. 2 (2021)
Unification
Creators: name: Sullivan, Benjamin
Publisher: name: figshare
Year: 2025
Subjects: classificationCode: 510899
subject: Quantum physics not elsewhere classified
classificationCode: 510399
subject: Classical physics not elsewhere classified
classificationCode: 510703
subject: Particle physics
classificationCode: 490299
subject: Mathematical physics not elsewhere classified
classificationCode: 510799
subject: Particle and high energy physics not elsewhere classified

description: This publication is comprised of two equations which are derived and extrapolated from a book that I created in 2015/2016: Probability, Quantum Mechanics, and Probability-Quanta. The latter consists of various thought experiments and postulates.
Subjective and objective binge episodes in relation to eating disorder and depressive symptoms among middle-aged women
Creators: name: DeVinney, Aubrey A.
name: Bardone-Cone, Anna M.
name: Thompson, Katherine A.
name: Kuang, Joanna
name: Goy, Casey N.
Publisher: name: Springer Nature
Year: 2021

description: Purpose Evidence suggests loss of control over eating may be the driving component of binge eating, a transdiagnostic symptom of eating disorders and highly comorbid with depressive symptoms. Prior studies have evaluated eating disorder and depressive symptoms across types of binge episodes among adolescent and young adult samples, yet no studies have focused on middle-aged women who may be particularly vulnerable to both binge eating and depressive symptoms. The goal of this study was to compare eating disorder symptoms and depressive symptoms across different types of binge eating episodes among middle-aged women. Methods Women (N=347), ages 40-63, completed an online survey about both objective (OBE) and subjective binge episodes (SBE), eating disorder symptoms, and depressive symptoms. Participants were categorized as OBEs only, SBEs only, both OBEs and SBEs, and no binge eating. Results Controlling for group differences, results showed middle-aged women who experienced SBEs only reported greater levels of anorexia nervosa attitudes and behaviors compared to all other groups, and greater dietary restraint compared to those who experienced only OBEs and those with no binge eating. Middle-aged women who experienced any type of binge eating reported greater levels of body image concerns and depressive symptoms compared to those who reported no binge eating. Conclusions Findings suggest that loss of control is more clinically relevant in terms of associations with eating disorder and depressive symptoms in middle-aged women.Level of evidenceLevel V based on descriptive studies.
Supramolecular assembly of the beta-catenin destruction complex and the effect of Wnt signaling on its localization, molecular size, and activity in vivo
Creators: name: Bonello, Teresa T.
name: Schaefer, Kristina N.
name: McKay, Daniel J.
name: Roberts, David M.
name: Peifer, Mark
name: Williams, Clara E.
name: Zhang, Shiping
Publisher: name: Public Library of Science (PLoS)
Year: 2018

description: Wnt signaling provides a paradigm for cell-cell signals that regulate embryonic development and stem cell homeostasis and are inappropriately activated in cancers. The tumor suppressors APC and Axin form the core of the multiprotein destruction complex, which targets the Wnt-effector beta-catenin for phosphorylation, ubiquitination and destruction. Based on earlier work, we hypothesize that the destruction complex is a supramolecular entity that self-assembles by Axin and APC polymerization, and that regulating assembly and stability of the destruction complex underlie its function. We tested this hypothesis in Drosophila embryos, a premier model of Wnt signaling. Combining biochemistry, genetic tools to manipulate Axin and APC2 levels, advanced imaging and molecule counting, we defined destruction complex assembly, stoichiometry, and localization in vivo, and its downregulation in response to Wnt signaling. Our findings challenge and revise current models of destruction complex function. Endogenous Axin and APC2 proteins and their antagonist Dishevelled accumulate at roughly similar levels, suggesting competition for binding may be critical. By expressing Axin:GFP at near endogenous levels we found that in the absence of Wnt signals, Axin and APC2 co-assemble into large cytoplasmic complexes containing tens to hundreds of Axin proteins. Wnt signals trigger recruitment of these to the membrane, while cytoplasmic Axin levels increase, suggesting altered assembly/disassembly. Glycogen synthase kinase3 regulates destruction complex recruitment to the membrane and release of Armadillo/beta-catenin from the destruction complex. Manipulating Axin or APC2 levels had no effect on destruction complex activity when Wnt signals were absent, but, surprisingly, had opposite effects on the destruction complex when Wnt signals were present. Elevating Axin made the complex more resistant to inactivation, while elevating APC2 levels enhanced inactivation. Our data suggest both absolute levels and the ratio of these two core components affect destruction complex function, supporting models in which competition among Axin partners determines destruction complex activity.
Super-resolution reconstruction of neonatal brain magnetic resonance images via residual structured sparse representation
Creators: name: Lin, Weili
name: Shen, Dinggang
name: Wang, Li
name: Yap, Pew-Thian
name: Zhang, Yongqin
name: Chen, Geng
Publisher: name: Elsevier
Year: 2019

description: Magnetic resonance images of neonates, compared with toddlers, exhibit lower signal-to-noise ratio and spatial resolution. In this paper, we propose a novel method for super-resolution reconstruction of neonate images with the help of toddler images, using residual-structured sparse representation with convex regularization. Specifically, we introduce a two-layer image representation, consisting of a base layer and a detail layer, to cater to signal variation across scanners and sites. The base layer consists of the smoothed version of the image obtained via Gaussian filtering. The detail layer is the difference between the original image and the base layer. High-frequency details in the detail layer are borrowed across subjects for super-resolution reconstruction. Experimental results on T1 and T2 images demonstrate that the proposed algorithm can recover fine anatomical structures, and generally outperform the state-of-the-art methods both qualitatively and quantitatively.
Supplementary document for A comparative study of photoluminescence dynamics of CdSe quantum dots on glass and ITO - 7192183.pdf
Creators: name: Xiang, Guohong
name: zhang, xinhai
name: Wang, Kai
name: Kwok, Hoi-Sing
name: Sun, Xiao Wei
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: fitted parameters
Surface Immobilization of a Re(I) Tricarbonyl Phenanthroline Complex to Si(111) through Sonochemical Hydrosilylation
Creators: name: Alameh, Reem T.
name: Chen, Cindy Y.
name: Bein, Gabriella P.
name: Kessinger, Matthew C.
name: Atallah, Hala
name: Wheeler, Jonathan P.
name: Huffman, Brittany L.
name: Durand, Nicolas
name: Donley, Carrie L.
name: Atkin, Joanna M.
name: Harvey, Alexis K.
name: Fakhraai, Zahra
name: Dempsey, Jillian L.
name: Castellano, Felix N.
Publisher: name: American Chemical Society (ACS)
Year: 2022

description: A sonochemical-based hydrosilylation method was employed to covalently attach a rhenium tricarbonyl phenanthroline complex to silicon(111). fac-Re(5-(p-Styrene)-phen)(CO)3Cl (5-(p-styrene)-phen = 5-(4-vinylphenyl)-1,10-phenanthroline) was reacted with hydrogen-terminated silicon(111) in an ultrasonic bath to generate a hybrid photoelectrode. Subsequent reaction with 1-hexene enabled functionalization of remaining atop Si sites. Attenuated total reflectance-Fourier transform infrared spectroscopy confirms attachment of the organometallic complex to silicon without degradation of the organometallic core, supporting hydrosilylation as a strategy for installing coordination complexes that retain their molecular integrity. Detection of Re(I) and nitrogen by X-ray photoelectron spectroscopy (XPS) further support immobilization of fac-Re(5-(p-styrene)-phen)(CO)3Cl. Cyclic voltammetry and electrochemical impedance spectroscopy under white light illumination indicate that fac-Re(5-(p-styrene)-phen)(CO)3Cl undergoes two electron reductions. Mott-Schottky analysis indicates that the flat band potential is 239 mV more positive for p-Si(111) co-functionalized with both fac-Re(5-(p-styrene)-phen)(CO)3Cl and 1-hexene than when functionalized with 1-hexene alone. XPS, ultraviolet photoelectron spectroscopy, and Mott-Schottky analysis show that functionalization with fac-Re(5-(p-styrene)-phen)(CO)3Cl and 1-hexene introduces a negative interfacial dipole, facilitating reductive photoelectrochemistry.
Synthesis and Characterization of Stable Gold(III) PNP Pincer Complexes
Creators: name: Heyn, Richard H.
name: Grajeda, Javier
name: Bruch, Quinton J.
name: Balcells, David
name: Miller, Alexander J. M.
name: Nova, Ainara
name: Wragg, David S.
name: Tilset, Mats
Publisher: name: Wiley
Year: 2018

description: The first mononuclear Au III PNP pincer complexes [PNP = bis(2-diisopropylphosphinophenyl)amide] are reported. The chloro complex [(PNP)Au(Cl)][OAc F ] (OAc F = OCOCF 3 ) was synthesized by microwave irradiation of a tetrachloroaurate salt and the neutral PN H P ligand. Dehalogenation with AgOAc F afforded the trifluoroacetate-bound complex [(PNP)Au(OAc F )][OAc F ]. Both complexes were characterized by NMR spectroscopy and X-ray crystallography. Electronic absorption spectroscopy and TD-DFT studies assigned the electronic transition that imbues the complexes with a deep royal blue color. The Au III trifluoroacetate complex is surprisingly stable, and no alkene insertion was observed under ethylene (C 2 H 4 ), even under high pressures and at high temperatures. DFT calculations suggest that the lack of reactivity is due to the high energy of the putative dicationic C 2 H 4 -bound intermediate invoked in a formal insertion reaction.
DS_10.1177_0363546519887909 – Supplemental material for Articular Joint-Simulating Mechanical Load Activates Endogenous TGF-β in a Highly Cellularized Bioadhesive Hydrogel for Cartilage Repair
Creators: name: Behrendt, Peter
name: Ladner, Yann
name: Stoddart, Martin James
name: Lippross, Sebastian
name: Alini, Mauro
name: Eglin, David
name: Armiento, Angela Rita
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 110314 Orthopaedics
subject: FOS: Clinical medicine
subject: 110604 Sports Medicine
subject: FOS: Health sciences
subject: 110323 Surgery

description: Supplemental material, DS_10.1177_0363546519887909 for Articular Joint-Simulating Mechanical Load Activates Endogenous TGF-β in a Highly Cellularized Bioadhesive Hydrogel for Cartilage Repair by Peter Behrendt, Yann Ladner, Martin James Stoddart, Sebastian Lippross, Mauro Alini, David Eglin and Angela Rita Armiento in The American Journal of Sports Medicine
МОНИТОРИНГОВОЕ НАБЛЮДЕНИЕ ХРОНИЧЕСКИХ ТАЗОВЫХ БОЛЕЙ У ЖЕНЩИН С ГИНЕКОЛОГИЧЕСКИМИ ЗАБОЛЕВАНИЯМИ
Creators: name: Насретдинова, Диёрахон
Publisher: name: Zenodo
Year: 2024

description: Хронические тазовые боли (ХТБ) являются одной из наиболее распространенных проблем у женщин, особенно у тех, кто страдает гинекологическими заболеваниями. Это состояние может значительно снизить качество жизни, повлиять на физическое и психическое благополучие, и поэтому требует внимания и комплексного подхода в диагностике и лечении.
Synthetic amyloid beta does not induce a robust transcriptional response in innate immune cell culture systems
Creators: name: Cohen, T. J.
name: Quiroga, I. Y.
name: Phanstiel, D. H.
name: Won, H.
name: Cohen, S.
name: Meeker, R. B.
name: Ragusa, J. V.
name: Tseng, J. H.
name: Reed, K. S. M.
name: Evangelista, B. A.
name: Bond, M. L.
name: Cruikshank, A. E.
Publisher: name: Springer Nature
Year: 2022

description: Background Alzheimer's disease (AD) is a progressive neurodegenerative disease that impacts nearly 400 million people worldwide. The accumulation of amyloid beta (Aβ) in the brain has historically been associated with AD, and recent evidence suggests that neuroinflammation plays a central role in its origin and progression. These observations have given rise to the theory that Aβ is the primary trigger of AD, and induces proinflammatory activation of immune brain cells (i.e., microglia), which culminates in neuronal damage and cognitive decline. To test this hypothesis, many in vitro systems have been established to study Aβ-mediated activation of innate immune cells. Nevertheless, the transcriptional resemblance of these models to the microglia in the AD brain has never been comprehensively studied on a genome-wide scale. Methods We used bulk RNA-seq to assess the transcriptional differences between in vitro cell types used to model neuroinflammation in AD, including several established, primary and iPSC-derived immune cell lines (macrophages, microglia and astrocytes) and their similarities to primary cells in the AD brain. We then analyzed the transcriptional response of these innate immune cells to synthetic Aβ or LPS and INFγ. Results We found that human induced pluripotent stem cell (hIPSC)-derived microglia (IMGL) are the in vitro cell model that best resembles primary microglia. Surprisingly, synthetic Aβ does not trigger a robust transcriptional response in any of the cellular models analyzed, despite testing a wide variety of Aβ formulations, concentrations, and treatment conditions. Finally, we found that bacterial LPS and INFγ activate microglia and induce transcriptional changes that resemble many, but not all, aspects of the transcriptomic profiles of disease associated microglia (DAM) present in the AD brain. Conclusions These results suggest that synthetic Aβ treatment of innate immune cell cultures does not recapitulate transcriptional profiles observed in microglia from AD brains. In contrast, treating IMGL with LPS and INFγ induces transcriptional changes similar to those observed in microglia detected in AD brains.
Synthetic digital reconstructed radiographs for MR-only robotic stereotactic radiation therapy: A proof of concept
Creators: name: Nie, Dong
name: Lian, Jun
name: Zhu, Tong
name: Szalkowski, Gregory
name: Yap, Pew-Thian
Publisher: name: Elsevier
Year: 2021

description: PURPOSE: To create synthetic CTs and digital reconstructed radiographs (DRRs) from MR images that allow for fiducial visualization and accurate dose calculation for MR-only radiosurgery. METHODS: We developed a machine learning model to create synthetic CTs from pelvic MRs for prostate treatments. This model has been previously proven to generate synthetic CTs with accuracy on par or better than alternate methods, such as atlas-based registration. Our dataset consisted of 11 paired CT and conventional MR (T2) images used for previous CyberKnife (Accuray, Inc) radiotherapy treatments. The MR images were pre-processed to mimic the appearance of fiducial-enhancing images. Two models were trained for each parameter case, using a sub-set of the available image pairs, with the remaining images set aside for testing and validation of the model to identify the optimal patch size and number of image pairs used for training. Four models were then trained using the identified parameters and used to generate synthetic CTs, which in turn were used to generate DRRs at angles 45° and 315°, as would be used for a CyberKnife treatment. The synthetic CTs and DRRs were compared visually and using the mean squared error and peak signal-to-noise ratio against the ground-truth images to evaluate their similarity. RESULTS: The synthetic CTs, as well as the DRRs generated from them, gave similar visualization of the fiducial markers in the prostate as the true counterparts. There was no significant difference found for the fiducial localization for the CTs and DRRs. Across the 8 DRRs analyzed, the mean MSE between the normalized true and synthetic DRRs was 0.66 ± 0.42% and the mean PSNR for this region was 22.9 ± 3.7 dB. For the full CTs, the mean MAE was 72.9 ± 88.1 HU and the mean PSNR was 31.2 ± 2.2 dB. CONCLUSIONS: Our machine learning-based method provides a proof of concept of a way to generate synthetic CTs and DRRs for accurate dose calculation and fiducial localization for use in radiation treatment of the prostate.
Supplementary_Material – Supplemental material for Dust deposition tracks late-Holocene shifts in monsoon activity and the increasing role of human disturbance in the Puna-Altiplano, northwest Argentina
Creators: name: Hooper, James
name: Marx, Samuel K
name: Jan-Hendrik May
name: Lupo, Liliana C
name: Kulemeyer, Julio J
name: Pereira, Elizabeth De Los Á
name: Seki, Osamu
name: Heijnis, Henk
name: Child, David
name: Gadd, Patricia
name: Atun Zawadzki
Publisher: name: SAGE Journals
Year: 2020
Subjects: Geography
History

description: Supplemental material, Supplementary_Material for Dust deposition tracks late-Holocene shifts in monsoon activity and the increasing role of human disturbance in the Puna-Altiplano, northwest Argentina by James Hooper, Samuel K Marx, Jan-Hendrik May, Liliana C Lupo, Julio J Kulemeyer, Elizabeth de los Á Pereira, Osamu Seki, Henk Heijnis, David Child, Patricia Gadd and Atun Zawadzki in The Holocene
Supplementary document for Color tunability, concentration dependence and temperature responsive afterglow of SrZn2(PO4)2: Eu2+, Mn2+ phosphors - 7192402.pdf
Creators: name: Li, Lulu
name: zhang, Dan
name: Li, Jing
name: Zhang, Xinlian
name: Duan, Yongmin
name: Zhang, Junjie
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: Supporting materials
Supplementary document for Color tunability, concentration dependence and temperature responsive afterglow of SrZn2(PO4)2: Eu2+, Mn2+ phosphors - 7192402.pdf
Creators: name: Li, Lulu
name: zhang, Dan
name: Li, Jing
name: Zhang, Xinlian
name: Duan, Yongmin
name: Zhang, Junjie
Publisher: name: Optica Publishing Group
Year: 2024
Subjects: Uncategorized

description: Supporting materials
Supplementary document for Wavelength and spin decoupled metasurface based on single-parameter modulation - 7192708.pdf
Creators: name: Wu, xianfeng
name: Zheng, Xinru
name: Xie, Xin
name: JI, Ruonan
name: Song, Kun
name: Zhao, X
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: Additional analysis related to manuscripts
Tandem detergent-extraction and immunoprecipitation of proteinopathy: Scalable enrichment of ALS-associated TDP-43 aggregates
Creators: name: Perna, Robert J.
name: White, Kristen
name: Ragusa, Joey V.
name: Barker, Natalie K.
name: Tian, Xu
name: Evangelista, Baggio A.
name: Necarsulmer, Julie C.
name: Meeker, Rick
name: Ajit, Tejazaditya
name: Herring, Laura E.
name: Cohen, Todd J.
name: Cahalan, Shannon R.
name: Cohen, Sarah
name: Mordant, Angie
Publisher: name: Elsevier
Year: 2023

description: Transactive response DNA-binding protein of 43 kDa (TDP-43) is a highly conserved, ubiquitously expressed nucleic acid-binding protein that regulates DNA/RNA metabolism. Genetics and neuropathology studies have linked TDP-43 to several neuromuscular and neurological disorders including amyotrophic lateral sclerosis (ALS) and frontotemporal lobar degeneration (FTLD). Under pathological conditions, TDP-43 mislocalizes to the cytoplasm where it forms insoluble, hyper-phosphorylated aggregates during disease progression. Here, we optimized a scalable in vitro immuno-purification strategy referred to as tandem detergent-extraction and immunoprecipitation of proteinopathy (TDiP) to isolate TDP-43 aggregates that recapitulate those identified in postmortem ALS tissue. Moreover, we demonstrate that these purified aggregates can be utilized in biochemical, proteomics, and live-cell assays. This platform offers a rapid, accessible, and streamlined approach to study ALS disease mechanisms, while overcoming many limitations that have hampered TDP-43 disease modeling and therapeutic drug discovery efforts.
SPQ939880_Appendix_Tables – Supplemental material for Social Capital, Social Cost, and Relational Culture in Three Societies
Creators: name: Lijun Song
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: Sociology
subject: FOS: Sociology

description: Supplemental material, SPQ939880_Appendix_Tables for Social Capital, Social Cost, and Relational Culture in Three Societies by Lijun Song in Social Psychology Quarterly
Targeting Regorafenib-Induced Toxicity through Inhibition of Gut Microbial β-Glucuronidases
Creators: name: Hanley, Ronan P.
name: Lim, Lauren
name: Redinbo, Matthew R.
name: Ervin, Samantha M.
name: Bhatt, Aadra P.
name: James, Lindsey I.
name: Walton, William G.
name: Pearce, Kenneth H.
Publisher: name: American Chemical Society (ACS)
Year: 2019

description: Regorafenib (Stivarga) is an oral small molecule kinase inhibitor used to treat metastatic colorectal cancer, hepatocellular carcinomas, and gastrointestinal stromal tumors. Diarrhea is one of the most frequently observed adverse reactions associated with regorafenib. This toxicity may arise from the reactivation of the inactive regorafenib-glucuronide to regorafenib by gut microbial β-glucuronidase (GUS) enzymes in the gastrointestinal tract. We sought to unravel the molecular basis of regorafenib-glucuronide processing by human intestinal GUS enzymes and to examine the potential inhibition of these enzymes. Using a panel of 31 unique gut microbial GUS enzymes derived from the 279 mapped from the human gut microbiome, we found that only four were capable of regorafenib-glucuronide processing. Using crystal structures as a guide, we pinpointed the molecular features unique to these enzymes that confer regorafenib-glucuronide processing activity. Furthermore, a pilot screen identified the FDA-approved drug raloxifene as an inhibitor of regorafenib reactivation by the GUS proteins discovered. Novel synthetic raloxifene analogs exhibited improved potency in both in vitro and ex vivo studies. Taken together, these data establish that regorafenib reactivation is exclusively catalyzed by gut microbial enzymes and that these enzymes are amenable to targeted inhibition. Our results unravel key molecular details of regorafenib reactivation in the GI tract and provide a potential pathway to improve clinical outcomes with regorafenib.
Technology-Enhanced Behavioral Parent Training: The Relationship Between Technology Use and Efficiency of Service Delivery
Creators: name: Jones, Deborah J.
name: McCall, Madison P.
name: Forehand, Rex
name: Loiselle, Raelyn
name: Highlander, April
name: Khavjou, Olga
name: Anton, Margaret T.
Publisher: name: SAGE Publications
Year: 2023

description: Behavior disorders (BDs) are common and, without treatment, can have long-term impacts on child and family health. Behavioral Parent Training (BPT) is the standard of care intervention for early-onset BDs; however, structural socioeconomic barriers hinder treatment outcomes for low-income families. While digital technologies have been proposed as a mechanism to improve engagement in BPT, research exploring the relationship between technology use and outcomes is lacking. Thus, this study with 34 low-income families examined the impact of parents' use of adjunctive mobile app components on treatment efficiency in one technology-enhanced (TE-) BPT program, Helping the Noncompliant Child (HNC). While parent use of the TE-HNC app and its impact on the efficiency of service delivery varied across specific components, increased app use significantly reduced the number of weeks required for families to achieve skill mastery. Implications for the design and development of behavior intervention technologies in general, as well as for BPT in particular, are discussed.
De Stijl's Principles and Their Roles on Modernist Furniture Movement: A Comparative Analysis
Creators: name: SALTİK, Burcin
name: MUHY AL-DİN, Salar Salah
Publisher: name: Zenodo
Year: 2025

description: In this study, a novel antenna design is presented and characterized to investigate its suitability in water pollution detection applications. The antenna exhibits excellent performance in meeting the stringent requirements of the Federal Communications Commission (FCC) for Ultra-Wideband (UWB) communications. The proposed antenna's return loss conforms to the FCC UWB specifications. At a resonant frequency of 6.34 GHz, the minimum return loss value is -27.236 dB. The proposed antenna's Voltage Standing Wave Ratio (VSWR) characteristics are illustrated with the minimum VSWR value displayed in linear scale. Furthermore, the real and imaginary parts of the antenna impedance are provided to reveal their stability within the UWB frequency range of 3.1-10.6 GHz. Notably, the antenna resistance remains constant, while the antenna reactance approaches zero. These impedance characteristics make the antenna a promising candidate for achieving a perfect match condition when used as a sensor for water pollution detection. The radiation patterns of the proposed antenna are detailed at the UWB center frequency of 6.85 GHz. These patterns display a primary radiation direction at 20 degrees, a main lobe magnitude of 8 dBi, and a side lobe level of -3.9 dB. These features make the antenna well-suited for water pollution detection applications where precise, UWB signal transmission and reception are crucial. Thus, this proposed antenna design offers promising prospects for enhancing the efficiency and accuracy of water pollution detection systems.
Temperature and Solvent Effects on H2 Splitting and Hydricity: Ramifications on CO2 Hydrogenation by a Rhenium Pincer Catalyst
Creators: name: Bruch, Quinton J.
name: Hu, Jenny
name: Miller, Alexander J. M.
Publisher: name: American Chemical Society (ACS)
Year: 2021

description: The catalytic hydrogenation of carbon dioxide holds immense promise for applications in sustainable fuel synthesis and hydrogen storage. Mechanistic studies that connect thermodynamic parameters with the kinetics of catalysis can provide new understanding and guide predictive design of improved catalysts. Reported here are thermochemical and kinetic analyses of a new pincer-ligated rhenium complex (tBuPOCOP)Re(CO)2 (tBuPOCOP = 2,6-bis(di-tert-butylphosphinito)phenyl) that catalyzes CO2 hydrogenation to formate with faster rates at lower temperatures. Because the catalyst follows the prototypical "outer sphere" hydrogenation mechanism, comprehensive studies of temperature and solvent effects on the H2 splitting and hydride transfer steps are expected to be relevant to many other catalysts. Strikingly large entropy associated with cleavage of H2 results in a strong temperature dependence on the concentration of [(tBuPOCOP)Re(CO)2H]- present during catalysis, which is further impacted by changing the solvent from toluene to tetrahydrofuran to acetonitrile. New methods for determining the hydricity of metal hydrides and formate at temperatures other than 298 K are developed, providing insight into how temperature can influence the favorability of hydride transfer during catalysis. These thermochemical insights guided the selection of conditions for CO2 hydrogenation to formate with high activity (up to 364 h-1 at 1 atm or 3330 h-1 at 20 atm of 1:1 H2:CO2). In cases where hydride transfer is the highest individual kinetic barrier, entropic contributions to outer sphere H2 splitting lead to a unique temperature dependence: catalytic activity increases as temperature decreases in tetrahydrofuran (200-fold increase upon cooling from 50 to 0 °C) and toluene (4-fold increase upon cooling from 100 to 50 °C). Ramifications on catalyst structure-function relationships are discussed, including comparisons between "outer sphere" mechanisms and "metal-ligand cooperation" mechanisms.