cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1 of Multi-omic insights into the formation and evolution of a novel shell microstructure in oysters
Creators: name: Bai, Yitian
name: Liu, Shikai
name: Hu, Yiming
name: Yu, Hong
name: Kong, Lingfeng
name: Xu, Chengxun
name: Li, Qi
Publisher: name: figshare
Year: 2023
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1: Figure S1. Genome assembly of C. nippona. Figure S2. Distribution of TEs in the C. nippona genome. Figure S3. Genomic synteny between C. nippona and other molluscs. Figure S4. Expansion of tyrosinase gene family in Protostomia. Figure S5. Expansion of peroxidase gene family in Protostomia. Figure S6. Expansion of tissue inhibitor of metalloproteinase (TIMP) gene family in Protostomia. Figure S7. Real-time PCR results showing gene expression patterns among tissues of C. nippona. Figure S8. Ultrastructure of the C. nippona shell. Figure S9. Base peak chromatogram of three types of protein sample of the C. nippona shell. Figure S10. Expression patterns of genes encoding shell matrix proteins (SMPs) in six types of tissues of C. nippona. Figure S11. Protein-domain analysis of shell proteomes from seven molluscs. Figure S12. Cartoon representation indicating domain structures of four SMPs in Figure 2e. Figure S13. Observation of the shell repair process of C. nippona. Figure S14. SEM images representative of the ultrastructure of repaired shell of C. nippona. Figure S15. Flower plot comparing orthologous groups among seven species. Figure S16. Cartoon representation indicating domains in Pif and LamG3 proteins identified as SMPs of C. nippona. Figure S17. Maximum likelihood (ML) tree of Pif and LamG3 in seven molluscs with transcriptome data. Figure S18. Genomic arrangement of Pif, ancestral Pif, and LamG3 genes in mollusks. Figure S19. Tissue expression patterns and protein domain structures of Pif_LamG3_cluster members in bivalves. Figure S20. Spatial expression patterns of Pif and LamG3 genes in C. nippona mantle.
title: Evaluating assumptions underlying a line transect an alysis of a 2004 Northwest Atlantic shipboard abundance survey for cetaceans
Creators: name: Palka, Debra Lynn
Publisher: name: ASC 2005 - R - Theme session
Year: 2024
Subjects: Fisheries and aquaculture
Ecosystem observation, processes and dynamics

description: No abstracts are to be cited without prior reference to the author.Like all statistical inference methods, the reliability of the results rests on the validity of the assumptions made. Line transect sampling has four essential assumptions: 1) measurements are accurate; 2) animals do not response to the observer; 3) animals directly on the transect line are detected with certainty (g(0)=1); and 4) probability of detecting animals vary only with respect to the perpendicular distance between the animal group and the ship’s track line. These assumptions were evaluated for a 2004 shipboard line-transect survey conducted to estimate the abundance of northwest Atlantic cetaceans. Using distance experiments, it was determined that measurement error and rounding was minimal. Using swim directions, it was determined that pilot whales (Globicephala spp.) were attracted to the ship, while Risso’s dolphins (Grampus griseus) avoided the ship. Using data collected from two observation teams, it was determined that estimates of g(0) ranged from 0.29 for beaked whales (Mesoplodon spp. and Ziphius cavirostris) to 0.64 for offshore bottlenose dolphins (Tursiops truncatus). Using a suite of covariates and DISTANCE 4, it was determined that in addition to perpendicular distance, the probability of detecting animals was commonly dependent on Beaufort sea state, group size, and cue, while less commonly on water depth and temperature. If these assumptions had not been evaluated and accounted for, then the abundance estimates would have been biased.
Violating the Quantum Focusing Conjecture and Quantum Covariant Entropy Bound in $d\ge 5$ dimensions
Creators: name: Fu, Zicao
name: Koeller, Jason
name: Marolf, Donald
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We study the Quantum Focussing Conjecture (QFC) in curved spacetime. Noting that quantum corrections from integrating out massive fields generally induce a Gauss-Bonnet term, we study Einstein-Hilbert-Gauss-Bonnet gravity and show for $d\ge 5$ spacetime dimensions that weakly-curved solutions can violate the associated QFC for either sign of the Gauss-Bonnet coupling. The nature of the violation shows that -- so long as the Gauss-Bonnet coupling is non-zero -- it will continue to arise for local effective actions containing arbitrary further higher curvature terms, and when gravity is coupled to generic $d\ge 5$ theories of massive quantum fields. The argument also implies violations of a recently-conjectured form of the generalized covariant entropy bound. The possible validity of the QFC and covariant entropy bound in $d\le 4$ spacetime dimensions remains open.
description: 13 pages, no figure; v2: note added
title: Hand Therapy Management of Camptodactyly
Creators: name: Daly, Orla
name: Barnes, Amanda
Publisher: name: German Medical Science GMS Publishing House
Year: 2020
Subjects: subject: Camptodactyly
subject: hand therapy
subject: 610 Medical sciences; Medicine

description: Clinical issue/s: Camptodactyly is a congenital flexion deformity of the middle joint (PIPJ) of a finger, which may progress if left untreated. A review of the literature found that there is much debate concerning the treatment of camptodactyly. A large proportion of the literature centres[for full text, please go to the a.m. URL]
description: 14th Triennial Congress of the International Federation of Societies for Surgery of the Hand (IFSSH), 11th Triennial Congress of the International Federation of Societies for Hand Therapy (IFSHT), 11th Triennial Congress of the International Federation of Societies for Hand Therapy (IFSHT)
Additional file 9 of Lipidomic analysis identifies age-disease-related changes and potential new biomarkers in brain-derived extracellular vesicles from metachromatic leukodystrophy mice
Creators: name: Pergande, Melissa R.
name: Kang, Christina
name: George, Diann
name: Sutter, Pearl A.
name: Crocker, Stephen J.
name: Cologna, Stephanie M.
name: Givogri, Maria I.
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 9. Heatmap representation of the intensity for lipids measured in brain derived EVs from MLD and control mice. Lipid species identified from the liquid chromatography mass spectrometry analysis of extracellular vesicles (EVs) for (A) acylcarnatine (ACar), (B) bis (monoacylglycero) phosphate (BMP)/ phosphatidylglycerol (PG), (C) ceramide non-hydroxyfatty acid-sphingosine (Cer_NS), (D) ceramide non-hydroxyfatty acid-dihydrosphingosine (Cer_NDS), (E) ceramide alpha-hydroxy fatty acid-sphingosine (Cer_AS), (F) ceramide esterified omega-hydroxy fatty acid-dihydrosphingosine (Cer_EODS), (G) (DG) diacylglycerol, (F) ether-linked phophatidylethanolamine (EtherPE), (G) fatty acid (FA), (H) fatty acid ester of hydroxyl fatty acid (FAHFA), (I) hexosylceramide non-hydroxyfatty acid-sphingosine (HexCer_NS), (J) hexosylceramide non-hydroxyfatty acid-dihydrosphingosine (HexCer_NDS), (K) Sulfatide (SHexCer), (L) lysophophatidylcholine (LPC), (M) lysophosphatidylethanolamine (LPE), (N) lysophosphatidylinositol (LPI), (O) lysophosphatidylserine (LPS), (P) monogalactosyldiacylglycerol (MGDG), (Q) phophatidylcholine (PC), (R) phatidylethanolamine (PE), (S) phosphatidylethanol (PEtOH), (T) phatidylinositol (PI), (U) phosphatidylserine (PS), (V) sphingomyelin (SM), (W) triacylglycerol (TG), (X) phosphatidic acid (PA) and (Y) cardiolipin (CL) lipid classes are shown for each biological replicate for control (ARSA+/+) and MLD (ARSA−/−) mice. Lipids noted with (+) or (−) were identified by fragmentation matching in positive or negative ion modes, respectively.
Grand-canonical solution of semi-flexible self-avoiding trails on the Bethe lattice
Creators: name: Dantas, W. G.
name: Oliveira, T. J.
name: Stilck, J. F.
name: Prellberg, T.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We consider a model of semi-flexible interacting self-avoiding trails (sISAT's) on a lattice, where the walks are constrained to visit each lattice edge at most once. Such models have been studied as an alternative to the self-attracting self-avoiding walks (SASAW) to investigate the collapse transition of polymers, with the attractive interactions being on site, as opposed to nearest-neighbor interactions in SASAW. The grand-canonical version of the sISAT model is solved on a four-coordinated Bethe lattice, and four phases appear: non-polymerized (NP), regular polymerized (P), dense polymerized (DP) and anisotropic nematic (AN), the last one present in the phase diagram only for sufficiently stiff chains. The last two phases are dense, in the sense that all lattice sites are visited once in AN phase and twice in DP phase. In general, critical NP-P and DP-P transition surfaces meet with a NP-DP coexistence surface at a line of bicritical points. The region in which the AN phase is stable is limited by a discontinuous critical transition to the P phase, and we study this somewhat unusual transition in some detail. In the limit of rods, where the chains are totally rigid, the P phase is absent and the three coexistence lines (NP-AN, AN-DP, and NP-DP) meet at a triple point, which is the endpoint of the bicritical line.
description: 11 pages, 7 figures
title: Investigations into the relationship between pelagic fish and dolphin distributions off the west coast of Scotland
Creators: name: Embling, Clare B.
name: Fernandes, Paul G.
name: Hammond, Phil S.
name: Armstrong, Eric
name: Gordon, Jonathan
Publisher: name: ASC 2005 - R - Theme session
Year: 2024
Subjects: Fisheries and aquaculture
Ecosystem observation, processes and dynamics

description: No abstracts are to be cited without prior reference to the author.Surveys of the main commercially exploited fish stocks are carried out on a regular basis in European waters, and provide promising platforms from which to conduct passive acoustic surveys for cetaceans. This study examines observations of cetacean distribution in relation to simultaneously collected pelagic fish distribution data. A two-element audio (100 Hz – 24 kHz) hydrophone was towed 400m behind a chartered pelagic fishing vessel, Enterprise, during one of the Fisheries Research Services (FRS) annual acoustic surveys for herring (Clupea harengus) in July 2004. The survey covered the continental shelf waters (to the 400m depth contour) to the west of Scotland from 56°N to 60°N. 30-second listening stations were carried out every 15 minutes, and dolphin whistle and click sound levels were assessed and noted to provide data on dolphin distribution. A Simrad EK500 echosounder operating at 38, 120 and 200 kHz was used, in conjunction with pelagic trawling, to collect data on the distribution and abundance of herring. The relationship between dolphin and pelagic fish distributions was examined within a multinomial logit model (MLM) framework. Issues associated with such methods have also been discussed, including the difficulty in determining dolphin species from their vocalisations, bias due to changes in vocalisation behaviour, and bias due to diurnal changes in herring
title: Hand therapy following post-traumatic metacarpophalangeal joint arthroplasty and prevention of potential complications: a case report
Creators: name: Tuna, Zeynep
name: Sari, Mustafa
name: Oskay, Deran
Publisher: name: German Medical Science GMS Publishing House
Year: 2020
Subjects: subject: hand function
subject: hand therapy
subject: metacarpophalangeal joint arthroplasty
subject: physiotherapy
subject: 610 Medical sciences; Medicine

description: Objective: The purpose of this case report is to contribute to the literature on the treatment methods of physiotherapy following metacarpophalangeal (MCP) joint arthroplasty and to present the results of our treatment program. We also would like to present the potential complications during hand therapy[for full text, please go to the a.m. URL]
description: 14th Triennial Congress of the International Federation of Societies for Surgery of the Hand (IFSSH), 11th Triennial Congress of the International Federation of Societies for Hand Therapy (IFSHT), 11th Triennial Congress of the International Federation of Societies for Hand Therapy (IFSHT)
Maestría en Ciencia de la Información: ámbito de formación integral y eje de un proyecto de integración científico
Creators: name: Grupo De Investigación Información, Conocimiento Y Sociedad
Publisher: name: figshare
Year: 2020
Subjects: subject: Information Systems
subject: FOS: Computer and information sciences

description: This article addresses two key issues related to the Master in Information Sciences: the importance of postgraduate studies, and the unifying role that Information Sciences play in inter and multidisciplinary processes aimed at the understanding of the information phenomenon in today’s world. This task sees the academic universe as an environment where science is, re-contextualized, institutionalized, and organized around teaching and research projects that are directed at having a humanizing effect. It also understands Information Sciences as a strategic project of reflection and participation in today’s social order.
This article addresses two key issues related to the Master in Information Sciences: the importance of postgraduate studies, and the unifying role that Information Sciences play in inter and multidisciplinary processes aimed at the understanding of the information phenomenon in today’s world. This task sees the academic universe as an environment where science is, re-contextualized, institutionalized, and organized around teaching and research projects that are directed at having a humanizing effect. It also understands Information Sciences as a strategic project of reflection and participation in today’s social order.
title: Formation sanitaire de la région de Casablanca
title: Formation sanitaire de la région de Casablanca
Creators: name: :Unkn
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2023
Subjects: subject: Ecole

description: Cartographie
description: BESM-carto_1950-44-p138_44-03
description: 138
description: 44
description: Bulletin économique et social du Maroc
description: Source: Bulletin économique et social du Maroc
description: Source: Bulletin économique et social du Maroc (BESM) > BESM (Cartographie)
description: Source: Maison méditerranéenne des sciences de l'homme, Cité numérique de la Méditerranée (Cinumed), Bibliothèque nationale du Royaume du Maroc (BNRM)
description: Relation: https://cinumed.mmsh.univ-aix.fr/idurl/1/81862
description: Coverage: Maroc
description: Coverage: Casablanca
description: Coverage: XXe siècle
description: Temporal: XXe siècle
description: Bibliographic citation: « Formation sanitaire de la région de Casablanca », In Bulletin économique et social du Maroc (BESM), n° 44, 1950
description: Provenance: Maison méditerranéenne des sciences de l'homme, Cité numérique de la Méditerranée (Cinumed), Bibliothèque nationale du Royaume du Maroc (BNRM)
description: Provenance: https://cinumed.mmsh.univ-aix.fr/
Fundamentals of the 3-3-1 Model with Heavy Leptons
Creators: name: Correia, F. C.
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The work is a brief review of the theory based on the $SU(3)_c \otimes SU(3)_L \otimes U(1)_X$ gauge group in the presence of Heavy Leptons. Recent analysis have established a set of four possible variants for the 3-3-1HL, whose content arises according to the so-denoted variable $β$. Since it has been argued about the presence of stable charged particles in this sort of models, we divide the different sectors of the Lagrangian between universal and specific vertices, and conclude that the omission of $β$-dependent terms in the potential may induce to a discrete symmetry for the versions defined by $|β|=\sqrt{3}$. In the context of $|β|=\frac{1}{\sqrt{3}}$, where the new degrees of freedom have the same standard electric charges, additional Yukawa interactions may create decay channels into the SM sector. Furthermore, we introduce a method of diagonalization by parts in the Scalar sector motivated by a general consequence of the Goldstone theorem. In summary, we develop the most complete set of terms allowed by the symmetry group and resolve their definitive pieces in order to justify the model description present in the literature.
description: 32 pages. Conclusions were reviewed. New content and references have been added
Additional file 1 of Indigenous farmers’ perceptions of problems in the rice field agroecosystems in the upper Baram, Malaysia
Creators: name: Hollaus, Alexander
name: Schunko, Christoph
name: Weisshaidinger, Rainer
name: Bala, Poline
name: Vogl, Christian R.
Publisher: name: figshare
Year: 2022
Subjects: subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy

description: Additional file 1: Landscape element categories. Categorisation of 44 features included in the sketch drawings and oral interviews around RAEs into 16 landscape elements. The table shows the inductively categorised landscape elements (left) based on the coded features from the sketch drawings and oral interviews (right).
title: Use and selection of prey by harp seals during summer in the northern Barents Sea
Creators: name: Nilssen, Kjell T.
name: Lindstrøm, Ulf
Publisher: name: ASC 2005 - R - Theme session
Year: 2024
Subjects: Fisheries and aquaculture
Ecosystem observation, processes and dynamics

description: No abstracts are to be cited without prior reference to the author.The aim of this study was analyse harp seals prey use and selection during summer in Svalbard waters. A total of 41, 34 and 58 (including 24 faeces samples) from animals were sampled in 1996, 1997 and 2004. Krill was the overall dominant prey species (63%) followed by polar cod (16%) and other fish species (10%) in terms of a combined index (frequency occurrence and weight). Resource mapping was performed in two areas simultaneous with the seal sampling, in 1996 and 1997 by using standard acoustic methods. These surveys suggested that krill was the most abundant prey in both areas and years; krill constituted 84% and 69% of the total prey biomass in 1996 (99.7 tonnes/nm2) and 1997 (21.4 tonnes/nm2), respectively followed by parathmisto sp. (13 and 18%) and Gammarus sp. (2 and 12%). The prey preference results suggest that harp seals are not particular prey selective, i.e., harp seals display a random feeding behaviour
What's in an entity? Exploring Nested Named Entity Recognition in the Historical Land Register of Basel (1400-1700).
Creators: name: Prada Ziegler, Ismail
Publisher: name: Zenodo
Year: 2024
Subjects: subject: Natural language processing
subject: Digital humanities
subject: History
subject: Machine learning

description: In this presentation I present my work in which I explore the application of nested named entity recognition (NNER) techniques on a specific corpus, that of the Historical Land Records of Basel, a repository of property transactions, dating from late medieval to early modern times.I evaluate an established NNER system and compare it to a self-developed approach utilizing the Flair NLP framework, showing that even on comparatively small amount of training data, reliable annotation can be achieved with my self-developed system.These results lay the groundwork for further experiments in the realm of information extraction, such as extraction relations and events from pre-modern documents.
Lectura y formación ciudadana. Un estudio aplicado a la Escuela de Animación Juvenil. Medellín, Colombia
Creators: name: Grupo De Investigación Información, Conocimiento Y Sociedad
Publisher: name: figshare
Year: 2020
Subjects: subject: Information Systems
subject: FOS: Computer and information sciences

description: This article presents the results of a study of the relationship between reading and citizen education in the context of work with young people which the School of Juvenile Animation in Medellín, Colombia, has been undertaking. For that purpose this paper considers the idea of reading from the comprehensive keys of modernity and goes into the matter of citizen education considered as a pedagogical practice within specific contexts of political culture.
Presenta algunos resultados de una investigación hecha respecto de las relaciones entre la lectura y la formación ciudadana en el contexto del trabajo con jóvenes que desarrolla la Escuela de Animación Juvenil (Medellín, Colombia). Para ello aborda la idea de lectura desde las claves comprensivas de la modernidad y se adentra en el ámbito de la formación ciudadana considerada como práctica pedagógica dentro de específicos contextos de cultura política.
Morphological characteristics and SRAP analysis of bermudagrass mutants generated by 60Co-γ radiation
Creators: name: Zhang, Xiaoxiao
name: Li, Jianjian
name: Kai, Wang
name: Rui, Wang
name: Ling, Li
name: Li, Dandan
name: Liu, Jianxiu
name: Guo, Hailin
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Plant Biology
subject: Virology

description: Yangjiang bermudagrass is an excellent variety with high turf quality and good stress tolerance; however, the inflorescence density of Yangjiang is too high, which leads to management problems. To lower the inflorescence density of Yangjiang bermudagrass, Yangjiang bermudagrass mutants were generated using gamma-ray irradiation. Forty-two mutants were generated, and identification was performed on the basis of eight morphological characteristics and SRAP molecular markers. The results showed that significant variation occurred for all characteristics among the mutants and their parent. Most of the mutants showed reduced turf height; reduced leaf length, internode length and number of reproductive branches; and reduced leaf width. Compared with Yangjiang, some mutants showed higher turf density. The inflorescence density of all tested samples was observed in June, August and November, and the inflorescence density of some mutants was always lower than that of their Yangjiang parent. Based on the morphological characteristics, 12 mutants with low inflorescence density were selected as promising progeny, and their genetic characteristics were identified by SRAP molecular markers. The results showed that all 12 mutants presented differences in amplified polymorphic fragments compared with those of Yangjiang, indicating that mutations at the DNA level occurred in all mutants.
Additional file 1 of Costing of an Australian general practice COVID-19 drive-through testing and respiratory clinic
Creators: name: Abraham, Patrick
name: Manski-Nankervis, Jo-Anne
name: Biezen, Ruby
name: Hallinan, Christine Mary
name: Gibney, Katherine B.
name: Sanci, Lena
name: Ride, Jemimah
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1.
Interaction effects on galaxy pairs with GeminiGMOS-III: Stellar population synthesis
Creators: name: Krabbe, A. C.
name: Rosa, D. A.
name: Pastoriza, M. G.
name: Hagele, G. F.
name: Cardaci, M. V.
name: Dors, O. L.
name: Winge, C.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We present an observational study of the impacts of the interactions on the stellar population in a sample of galaxy pairs. Long-slit spectra in the wavelength range 3440-7300 Å obtained with the Gemini Multi-Object Spectrograph (GMOS) at Gemini South for fifteen galaxies in nine close pairs were used. The spatial distributions of the stellar population contributions were obtained using the stellar population synthesis code STARLIGHT. Taking into account the different contributions to the emitted light, we found that most of the galaxies in our sample are dominated by the young/intermediate stellar populations. This result differs from the one derived for isolated galaxies where the old stellar population dominates the disc surface brightness. We interpreted such different behavior as being due to the effect of gas inflows along the disk of interacting galaxies on the star formation in a time scale of the order of about 2Gyr. We also found that, in general, the secondary galaxy of the pairs has a higher contribution of the young stellar population than the primary one. We compared the estimated values of the stellar and nebular extinctions derived from the synthesis method and the Hα/H\b{eta} emission-line ratio finding that the nebular extinctions are systematically higher than stellar ones by about a factor of 2. We did not find any correlation between nebular and stellar metallicities. We neither found a correlation between stellar metallicities and ages while a positive correlation between nebular metallicities and stellar ages was obtained, with the older regions being the most metal-rich.
description: Accepted for publication in MNRAS
Algebra of Implicitly Defined Constraints for Gravity as the General Form of Embedding Theory
Creators: name: Paston, S. A.
name: Semenova, E. N.
name: Franke, V. A.
name: Sheykin, A. A.
Publisher: name: arXiv
Year: 2017
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We consider the embedding theory, the approach to gravity proposed by Regge and Teitelboim, in which 4D space-time is treated as a surface in high-dimensional flat ambient space. In its general form, which does not contain artificially imposed constraints, this theory can be viewed as an extension of GR. In the present paper we study the canonical description of the embedding theory in this general form. In this case, one of the natural constraints cannot be written explicitly, in contrast to the case where additional Einsteinian constraints are imposed. Nevertheless, it is possible to calculate all Poisson brackets with this constraint. We prove that the algebra of four emerging constraints is closed, i.e., all of them are first-class constraints. The explicit form of this algebra is also obtained.
description: 11 pages
Detection of quasars in the time domain
Creators: name: Graham, Matthew J.
name: Djorgovski, S. G.
name: Stern, Daniel J.
name: Drake, Andrew J.
name: Mahabal, Ashish
Publisher: name: arXiv
Year: 2016
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: The time domain is the emerging forefront of astronomical research with new facilities and instruments providing unprecedented amounts of data on the temporal behavior of astrophysical populations. Dealing with the size and complexity of this requires new techniques and methodologies. Quasars are an ideal work set for developing and applying these: they vary in a detectable but not easily quantifiable manner whose physical origins are poorly understood. In this paper, we will review how quasars are identified by their variability and how these techniques can be improved, what physical insights into their variability can be gained from studying extreme examples of variability, and what approaches can be taken to increase the number of quasars known. These will demonstrate how astroinformatics is essential to discovering and understanding this important population.
description: 10 pages, 6 figures, IAU Symposium 325, "Astroinformatics"
Tailoring spin defects in diamond
Creators: name: de Oliveira, Felipe Fávaro
name: Antonov, Denis
name: Wang, Ya
name: Neumann, Philipp
name: Momenzadeh, S. Ali
name: Häußermann, Timo
name: Pasquarelli, Alberto
name: Denisenko, Andrej
name: Wrachtrup, Jörg
Publisher: name: arXiv
Year: 2017
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Atomic-size spin defects in solids are unique quantum systems. Most applications require nanometer positioning accuracy, which is typically achieved by low energy ion implantation. So far, a drawback of this technique is the significant residual implantation-induced damage to the lattice, which strongly degrades the performance of spins in quantum applications. In this letter we show that the charge state of implantation-induced defects drastically influences the formation of lattice defects during thermal annealing. We demonstrate that charging of vacancies localized at e.g. individual nitrogen implantation sites suppresses the formation of vacancy complexes, resulting in a tenfold-improved spin coherence time of single nitrogen-vacancy (NV) centers in diamond. This has been achieved by confining implantation defects into the space charge layer of free carriers generated by a nanometer-thin boron-doped diamond structure. Besides, a twofold-improved yield of formation of NV centers is observed. By combining these results with numerical calculations, we arrive at a quantitative understanding of the formation and dynamics of the implanted spin defects. The presented results pave the way for improved engineering of diamond spin defect quantum devices and other solid-state quantum systems.
Additional file 1 of COVID-19 case findings and contact tracing in South German nursing homes
Creators: name: Eichner, Linda
name: Schlegel, Christiane
name: Roller, Gottfried
name: Fischer, Hannes
name: Gerdes, Rieke
name: Sauerbrey, Felix
name: Schönleber, Sarah
name: Weinhart, Franziska
name: Eichner, Martin
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 1: Supplementary Material for Covid-19 finding and contact tracing in South German nursing homes. Detailed results of tested nursing home staff and residents in each testing phase, including number of cases found in each nursing home, as well as gender, underlying medical conditions, symptoms, hospitalizations, and deaths of Covid-19 cases.
Additional file 1 of Administration of allogeneic mesenchymal stem cells in lengthening phase accelerates early bone consolidation in rat distraction osteogenesis model
Creators: name: Yang, Yanhua
name: Pan, Qi
name: Zou, Kaijie
name: Wang, Haixing
name: Zhang, Xiaoting
name: Yang, Zhengmeng
name: Lee, Wayne Yuk Wai
name: Wei, Bo
name: Gu, Weidong
name: Yang, Yunzhi Peter
name: Lin, Sien
name: Li, Gang
Publisher: name: figshare
Year: 2020
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology

description: Additional file 1: Figure S1. The expression of green fluorescent protein (GFP) in the distraction regenerates in the DO animals. Animals were treated with single injection of MSCs on day 3 (D3), day 6 (D6), or day 10 (D10), or one injection of MSCs on day 3, day 6, and day 10 (Triple). Data showed no positive expression of GFP signal in the regenerate after 33 days of lengthening, indicating that the injected cells may not directly incorporate into the regenerates. Scale bar: 100 μm.
What's in an entity? Exploring Nested Named Entity Recognition in the Historical Land Register of Basel (1400-1700).
Creators: name: Prada Ziegler, Ismail
Publisher: name: Zenodo
Year: 2024
Subjects: subject: Natural language processing
subject: Digital humanities
subject: History
subject: Machine learning

description: In this presentation I present my work in which I explore the application of nested named entity recognition (NNER) techniques on a specific corpus, that of the Historical Land Records of Basel, a repository of property transactions, dating from late medieval to early modern times. I evaluate an established NNER system and compare it to a self-developed approach utilizing the Flair NLP framework, showing that even on comparatively small amount of training data, reliable annotation can be achieved with my self-developed system. These results lay the groundwork for further experiments in the realm of information extraction, such as extraction relations and events from pre-modern documents. 

The links to the presented model and code can be found in the file "repositories.md".
title: Distribution, abundance and trends in abundance of fin and humpback whales in the North Atlantic-R:12
Creators: name: Pike, D.G.
name: Gunnlaugsson, Th.
name: Øien, N.
name: Desportes, G.
name: Víkingsson, G.A.
name: Paxton, C.G.M.
name: Bloch., D.
Publisher: name: ASC 2005 - R - Theme session
Year: 2024
Subjects: Fisheries and aquaculture
Ecosystem observation, processes and dynamics

description: No abstracts are to be cited without prior reference to the author.The North Atlantic Sightings Surveys (NASS) are a series of international cetacean line transect surveys, including participation from the Faroe Islands, Iceland, Norway and Spain, that have been conducted in 1987, 1989, 1995 and 2001. The NASS have covered a very large area of the central and eastern North Atlantic, from East Greenland east to coastal Norway, and from Svalbard south to the Iberian peninsula. The surveys used ships and aircraft as survey platforms. Target species were minke, fin and pilot whales, but all species encountered were registered. Here we present estimates of abundance for fin and humpback whales from the Northeast and Central portions of the survey area. The estimates are negatively biased because of whales diving during the passage of the survey platform and whales being missed by observers, but these and other potential biases are likely small for these species. Fin whales occurred in highest densities in Denmark Strait west of Iceland, while humpback whales were most abundant in shelf waters east and west of Iceland. The abundance of fin whales increased in the survey area over the period, with the greatest increase observed in the waters west of Iceland. There were 29,900 (cv 0.11) fin whales in the area in 2001. There has been a great increase in the abundance of humpback whales around Iceland, but not in other areas. Aerial surveys conducted in Icelandic coastal waters indicate an annual rate of increase of 15% in this area. There were 14,900 (cv 0.26) humpback whales in the entire survey area in 2001. The observed trends are consistent with increases in abundance following the cessation of whaling in this area, but the magnitudes of the observed increases, taken at face value, are greater than expected.. For humpback whales in particular, our recent estimates are substantially higher than some estimates of pre-whaling abundance. Other factors, including differential harvesting of sub-stocks, changes in carrying capacity, immigration from other areas, the near extirpation of some other cetacean species, and operational factors in the surveys themselves, may be involved.
Increasing granular flow rate with obstructions
Creators: name: Murray, Alan
name: Alonso-Marroquin, Fernando
Publisher: name: arXiv
Year: 2017
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: We describe a simple experiment involving spheres rolling down an inclined plane towards a bottleneck and through a gap. Results of the experiment indicate that flow rate can be increased by placing an obstruction at optimal positions near the bottleneck. We use the experiment to develop a computer simulation using the PhysX physics engine. Simulations confirm the experimental results and we state several considerations necessary to obtain a model that agrees well with experiment. We demonstrate that the model exhibits clogging, intermittent and continuous flow, and that it can be used as a tool for further investigations in granular flow.
description: 7 pages, 6 figures
La formación ciudadana, dinamizadora de procesos de transformación social desde la biblioteca pública
Creators: name: Grupo De Investigación Información, Conocimiento Y Sociedad
Publisher: name: figshare
Year: 2020
Subjects: subject: Information Systems
subject: FOS: Computer and information sciences

description: From a qualitative focus with the comprehensive case–study strategic methodology (leading discourses) and the conceptual bases of the social education using the qualitative techniques (participant observant interview) the contribution of the public library for the citizenship formation process is analyzed from the coexistence, participation and autonomy points of view. There are citizens' practices stemming from interactions, relationships and actions in public libraries acknowledging the new meanings and functions of this institution in the 21st century within a democracy–searching society recognizing information and knowledge as essential categories for the exercise of citizenship and the base to achieve transformations of the subject and the social reality.
Desde un enfoque cualitativo, con la estrategia metodológica estudio de caso, la base comprensiva sobre biblioteca pública (discursos rectores) y los fundamentos conceptuales de la educación social, y mediante el uso de técnicas cualitativas (la observación participante y la entrevista), se analiza el aporte de la biblioteca pública en procesos de formación ciudadana desde las prácticas de la convivencia, la participación y la autonomía. Prácticas ciudadanas que surgen de las interacciones, las relaciones y las acciones en la biblioteca pública y que dan cuenta de los nuevos sentidos y funciones de esta institución en el siglo XXI, inmersa en una sociedad que, al buscar la democracia, confiere a la información y al conocimiento categoría de medios esenciales para el ejercicio ciudadano y base para lograr trasformaciones del sujeto y de la realidad social.
La gestión del conocimiento y su relación con la documentación
Creators: name: Grupo De Investigación Información, Conocimiento Y Sociedad
Publisher: name: figshare
Year: 2020
Subjects: subject: Information Systems
subject: FOS: Computer and information sciences

description: From the different definitions and conceptions about what is knowledge management (KM) and documentation, is offered a panorama that introduces the basic conceptual fundaments of which one of those knowledge areas. There are given the principal KM and intellectual capital models that are worked in the business environment and the distinct sights that have been formed around what the documentation is. There are illustrated the different relations that are established between this new business tendency and the documentation, and the we continue with an advance about the knowledge management incidence in the Medellín companies between 1995 and 2001 research, with emphasis on the documentation as a KM measurement tool.
A partir de las diferentes definiciones y concepciones de lo que es la gestión del conocimiento (GC) y la documentación, se ofrece un panorama que introduce los fundamentos conceptuales básicos de cada una de estas áreas del saber. Se dan a conocer los principales modelos de (GC) y de capital intelectual que se trabajan en el ámbito empresarial y los diversos puntos de vista que se han formado en torno a lo que es la documentación. Se ilustran las diferentes relaciones que se establecen entre esta nueva tendencia empresarial y la documentación y se continúa con un avance sobre la investigación de la incidencia de la gestión del conocimiento en las empresas de Medellín entre 1995 y 2001, con énfasis en la documentación como herramienta de medición de la GC.
title: Return to employment after carpal tunnel release (REACTS): a prospective cohort study
Creators: name: Newington, Lisa
name: Warwick, David
name: Salika, Theodosia
name: Adams, Jo
name: Walker-Bone, Karen
Publisher: name: German Medical Science GMS Publishing House
Year: 2020
Subjects: subject: Carpal tunnel syndrome
subject: carpal tunnel release
subject: return to work
subject: sick leave
subject: 610 Medical sciences; Medicine

description: Objectives/Interrogation: To explore when and how patients return to different types of work after carpal tunnel release (CTR) and to identify the key factors predicting the duration of post-operative sick leave. Methods: Participants with CTS (carpal tunnel syndrome) were recruited pre-operatively[for full text, please go to the a.m. URL]
description: 14th Triennial Congress of the International Federation of Societies for Surgery of the Hand (IFSSH), 11th Triennial Congress of the International Federation of Societies for Hand Therapy (IFSHT), 11th Triennial Congress of the International Federation of Societies for Hand Therapy (IFSHT)
Additional file 1 of Metabolic impact of a nutrition education program for the promotion of fruit and vegetable consumption with people with severe mental disorders (DIETMENT)
Creators: name: Foguet-Boreu, Quintí
name: Vilamala-Orra, Mireia
name: Vaqué-Crusellas, Cristina
name: Roura-Poch, Pere
name: Assens Tauste, Montse
name: Bori Vila, Judit
name: Santos-López, Jose Manuel
name: del Río Sáez, Ruben
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1: Measurements and instruments
title: Smoking as risk factor for carpal tunnel syndrome: a birth cohort study
Creators: name: Hulkkonen, Sina
name: Auvinen, Juha
name: Miettunen, Jouko
name: Karppinen, Jaro
name: Ryhänen, Jorma
Publisher: name: German Medical Science GMS Publishing House
Year: 2020
Subjects: subject: carpal tunnel syndrome
subject: smoking
subject: tobacco
subject: epidemiology
subject: birth cohort
subject: 610 Medical sciences; Medicine

description: Objectives/Interrogation: The aim of this study was to determine whether smoking is associated with carpal tunnel syndrome (CTS) from two perspectives: if maternal smoking and offspring's own smoking affect the offspring's risk for CTS. Methods: The study sample consisted of the [for full text, please go to the a.m. URL]
description: 14th Triennial Congress of the International Federation of Societies for Surgery of the Hand (IFSSH), 11th Triennial Congress of the International Federation of Societies for Hand Therapy (IFSHT), 11th Triennial Congress of the International Federation of Societies for Hand Therapy (IFSHT)
The future of data integration – Shaping ELIXIR’s interoperability platform with real-world use cases
Creators: name: Wolmar Nyberg Åkerström
name: Pulido, Antonio Hermoso
name: Welter, Danielle
name: Juty, Nick
name: Burdett, Tony
name: Tooba Abbassi-Daloii
name: Ioannidis, Vassilios
name: Teh, Wei Kheng
name: Gundersen, Sveinung
name: ELIXIR Interoperability Platform
Publisher: name: F1000 Research Limited
Year: 2024

description: This workshop will showcase how ELIXIR members at all levels can engage with ELIXIR’s Interoperability Platform (EIP) to strengthen their expertise and access information resources. It is organised by the EIP and focuses on the activities that drive its transition to a sustainable framework for enabling real-world data integration and reuse by promoting and supporting interoperability, data management and FAIR principles.

The workshop objectives are to: 1) highlight opportunities for the wider ELIXIR community to engage with activities organised under the new EIP programme to pave the way for synergistic activities across Nodes, Platforms, Communities and projects; and 2) support ELIXIR members in sharing and discussing expertise and learnings from related activities to seed the EIP programme. The intended audience is ELIXIR community members engaged in data integration/reuse challenges and who would like to liaise with the EIP activities. Furthermore, since it will also promote the broader EIP ecosystem and the scope of the EIP programme, anyone is welcome to participate.

The EIP’s transition to a sustainable framework centres on mature Products that enable FAIRification and responsible RDM, data integration and analysis; specific Processes that use (or need) Products; and broader Practices that enable a user to succeed. Each of “the Three Ps” (Products, Processes, Practices) are addressed by tasks and deliverables in the new EIP programme:

 Growing the FAIR-enabling portfolio of products (WP2)
 Standardising processes for FAIR data management (WP3)
 Establishing best practices for interoperable data management and use (WP4)

During the first part of the workshop, participants will be introduced to the EIP vision with examples of opportunities to engage and potential liaison strategies. The second part focuses on discussions to identify ‘target’ ELIXIR communities to work with for the EIP’s initial tasks. The workshop concludes with reflections on the next steps to take across the EIP programme WPs and future touching points across the EIP and activities in the wider ELIXIR community. 

The expected outcome is an outline of future interactions between the wider ELIXIR community and the EIP programme including examples of resources and learnings that should inform its work. Beyond the contributions to the EIP, participants will be equipped with a better understanding of how they can leverage the EIP and its current offerings/activities in their own communities. The broader impact includes strengthening ELIXIR’s advancements around federation and FAIR data across the scientific programme’s themes grounded in the “the Three Ps” of the EIP.