cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Week 96 subgroup analyses of the phase 3, randomized AMBER and EMERALD trials evaluating the efficacy and safety of the once daily darunavir/cobicistat/emtricitabine/tenofovir alafenamide (D/C/F/TAF) single-tablet regimen in antiretroviral treatment (ART)-naïve and -experienced, virologically-suppressed adults living with HIV-1
Creators: name: Huhn, Gregory D.
name: Wilkin, Aimee
name: Mussini, Cristina
name: Spinner, Christoph D.
name: Jezorwski, John
name: Mohsine El Ghazi
name: Van Landuyt, Erika
name: Lathouwers, Erkki
name: Brown, Kimberley
name: Baugh, Bryan
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: FOS: Biological sciences
subject: 60506 Virology

description: Darunavir/cobicistat/emtricitabine/tenofovir alafenamide (D/C/F/TAF) 800/150/200/10 mg was investigated in AMBER (treatment-naïve adults; NCT02431247) and EMERALD (treatment-experienced, virologically-suppressed adults; NCT02269917). To describe a Week 96 pre-planned subgroup analysis of D/C/F/TAF arms by demographic characteristics (age ≤/>50 years, gender, black/non-black race), and baseline clinical characteristics (AMBER: viral load [VL], CD4+ count, WHO clinical stage, HIV-1 subtype and antiretroviral resistance; EMERALD: prior virologic failure [VF], antiretroviral experience, screening boosted protease inhibitor [PI], and boosting agent). Patients in D/C/F/TAF and control arms could continue on/switch to D/C/F/TAF in a single-arm, open-label extension phase after Week 48 until Week 96. Efficacy endpoints were percentage cumulative confirmed VL ≥50 copies/mL (virologic rebound; EMERALD), and VL <50 (virologic response), or ≥50 copies/mL (VF) (FDA snapshot; both trials). D/C/F/TAF demonstrated high Week 96 virologic responses (AMBER: 85% [308/362]; EMERALD: 91% [692/763]) and low VF rates (AMBER: 6% [20/362]; EMERALD: 1% [9/763]). In EMERALD, D/C/F/TAF showed low virologic rebound cumulative through Week 96 (3% [24/763]). Results were consistent across subgroups, including prior antiretroviral experience in EMERALD. No darunavir, primary PI, or tenofovir resistance-associated mutations were observed post-baseline. Study-drug-related serious adverse events (AEs) and AE-related discontinuations were <1% and 2%, respectively (both D/C/F/TAF arms), and similar across subgroups. eGFRcyst and bone mineral density improved or were stable and lipids increased through Week 96 across demographic subgroups, with small changes in total-cholesterol/HDL-cholesterol ratio. D/C/F/TAF was effective with a high barrier to resistance and bone/renal safety benefits, regardless of demographic or clinical characteristics for treatment-naïve and treatment-experienced, virologically-suppressed adults.
How fast could a proto-pulsar rotate?
Creators: name: Xu, R. X.
name: Wang, H. G.
name: Qiao, G. J.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: According to two estimated relations between the initial period and the dynamo-generated magnetic dipole field of pulsars, we calculate the statistical distributions of pulsar initial periods. It is found that proto-pulsars are very likely to have rotation periods between 20 and 30 ms, and that most of the pulsars rotate initially at a period < 60 ms.
description: submitted, or at http://vega.bac.pku.edu.cn/~rxxu/publications/index_P.htm
Non-affine lattice dynamics of disordered solids
Creators: name: Krausser, Johannes
Publisher: name: Apollo - University of Cambridge Repository
Year: 2018
Subjects: disordered solids
elastic heterogeneities
non-affine lattice dynamics
kernel polynomial method
linear viscoelastic response

description: This thesis provides a study of different aspects of the mechanical and vibrational properties of disordered and amorphous solids. Resorting to the theoretical framework of non-affine lattice dynamics the attention is focused on the analysis of disordered networks and lattices which serve as tractable model systems for real materials. Firstly, we discuss the static elastic response and the vibrational spectra of defective fcc crystals. The connection to different types of microstructural disorder in the form of bond-depletion and vacancies is described within the context of the inversion symmetry breaking of the local particle configurations. We identify the fluctuations of the local inversion symmetry breaking, which is directly linked to the non-affinity of the disordered solid, as the source of different scalings behaviours of the position of the boson peak. Furthermore, we describe the elastic heterogeneities occurring in a bond-depleted two- dimensional lattice with long-range interactions. The dependence of the concomitant correlations of the local elastic moduli are studied in detail in terms of the interaction range and the degree of disorder. An analytical scaling relation is derived for the radial part of the elastic correlations in the affine limit. Subsequently, we provide an argument for the change of the angular symmetry of the elastic correlation function which was observed in simulations and experiments on glasses and colloids, respectively. Moving to the dynamical behaviour of disordered solids, a framework is developed based on the kernel polynomial method for the approximate computation of the non- affine correlator of displacement fields which is the key requirement to describe the linear viscoelastic response of the system within the quasi-static non-affine formalism. This approach is then extended to the case of multicomponent polymer melts and validated against molecular dynamics simulations at low non-zero temperatures. We also consider the dynamical behaviour of metallic glasses in terms of its shear elasticity and viscosity. A theoretical scheme is suggested which links the repulsive strength of the interatomic potential to the viscoelasticity and fragility in metallic glasses in the quasi-affine limit.
Weakly Supervised Semantic Segmentation Using Constrained Dominant Sets
Creators: name: Aslan, Sinem
name: Pelillo, Marcello
Publisher: name: arXiv
Year: 2019
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: The availability of large-scale data sets is an essential pre-requisite for deep learning based semantic segmentation schemes. Since obtaining pixel-level labels is extremely expensive, supervising deep semantic segmentation networks using low-cost weak annotations has been an attractive research problem in recent years. In this work, we explore the potential of Constrained Dominant Sets (CDS) for generating multi-labeled full mask predictions to train a fully convolutional network (FCN) for semantic segmentation. Our experimental results show that using CDS's yields higher-quality mask predictions compared to methods that have been adopted in the literature for the same purpose.
Carnet nº 17, commencé à Pingshi (p. 14)
Creators: name: Péraire, Lucien
name: CNRS
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2023

description: created: 20-12-1930
Recent lattice results relevant for heavy ion collisions
Creators: name: Kanaya, Kazuyuki
Publisher: name: arXiv
Year: 2002
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: I summarize recent lattice results on QCD at finite temperatures and densities. Studies on the nature of the QCD transition at the physical point, continuum extra polations of thermodynamic quantities, and new calculations of hadronic spectral functions applying the maximum entropy method are discussed. Recent advances in finite density QCD are also reviewed.
description: Talk presented at the XVI International Conference on Ultrarelativistic Nucleus-Nucleus Collisions (Quark Matter 2002), July 18--24, 2002, Nantes, France. 10 pages, 8 PS figures
Consumer Attitudes, Knowledge and Behavior in the Russian Market of Food
Creators: name: Meixner, Oliver
name: Haas, Rainer
name: Perevoshchikova, Yana
name: Canavari, Maurizio
name: Meixner, Oliver
name: Haas, Rainer
name: Perevoshchikova, Yana
name: Canavari, Maurizio
Publisher: name: Unknown
Year: 2014
Subjects: subject: Agribusiness
subject: Food Consumption/Nutrition/Food Safety
subject: Russian Federation
subject: organic food
subject: organic labels
subject: food choice
subject: consumer perception
subject: conjoint analy-sis

description: In the last decades the market for organic food was well developed in Western European Countries and com-parable markets like the US or Canada. While these markets more or less approach market saturation, other markets still have huge potentials and are of special interest for exporting companies. In this paper we analyze demands, knowledge and expectations in the emerging market Russia. It is well documented that the Russian market for organic food has much higher growth rates compared to Western markets. According to the USDA, the market rose from about 640 million Rubel in 2004 to about 7.4 billion Rubel in 2011 (about 155 Mio €). This dramatic boost in sales might also be due to a significant change in Russians’ consumer behavior. Howev-er, some challenges have to be considered when entering the Russian market with premium products (organic food is usually sold at comparable high prices in Russia). (1) There is a huge number of low-income consumers who are not able to pay for premium products. (2) Up to now, there are no official organic labels available in Russia. Therefore, it is likely that the Russian population has a lack of knowledge on what organic food is and which requirements are connected to the organic production process. Considering these restrictions, it was interesting to analyze important factors for the food choice on the one hand and the knowledge of Russian consumers about organic food on the other. This contribution will present results for one specific product (organic potatoes) which can be considered to be a typical alternative to low priced, conventional products. A conjoint analysis was conducted in Saint Petersburg investigating the importance of buying attributes con-nected to organic potatoes (n = 300); obviously, the results are not representative for the whole Russian mar-ket. But the results impressively show how different consumers’ attitudes are compared to Western markets and how low the average knowledge about this product category still is. The findings deliver valuable infor-mation for all members within the supply chain who want to enter a market with high growth rates but also with obvious shortcomings.
Searching for Solar Siblings in APOGEE and $Gaia$ DR2 with N-body Simulations
Creators: name: Webb, Jeremy J.
name: Price-Jones, Natalie
name: Bovy, Jo
name: Zwart, Simon Portegies
name: Hunt, Jason A. S.
name: Mackereth, J. Ted
name: Leung, Henry W.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We make use of APOGEE and $Gaia$ data to identify stars that are consistent with being born in the same association or star cluster as the Sun. We limit our analysis to stars that match solar abundances within their uncertainties, as they could have formed from the same Giant Molecular Cloud (GMC) as the Sun. We constrain the range of orbital actions that solar siblings can have with a suite of simulations of solar birth clusters evolved in static and time-dependent tidal fields. The static components of each galaxy model are the bulge, disk, and halo, while the various time-dependent components include a bar, spiral arms, and GMCs. In galaxy models without GMCs, simulated solar siblings all have $J_R < 122$ km $\rm s^{-1}$ kpc, $990 < L_z < 1986$ km $\rm s^{-1}$ kpc, and $0.15 < J_z < 0.58$ km $\rm s^{-1}$ kpc. Given the actions of stars in APOGEE and $Gaia$, we find 104 stars that fall within this range. One candidate in particular, Solar Sibling 1, has both chemistry and actions similar enough to the solar values that strong interactions with the bar or spiral arms are not required for it to be dynamically associated with the Sun. Adding GMCs to the potential can eject solar siblings out of the plane of the disk and increase their $J_z$, resulting in a final candidate list of 296 stars. The entire suite of simulations indicate that solar siblings should have $J_R < 122$ km $\rm s^{-1}$ kpc, $353 < L_z < 2110$ km $\rm s^{-1}$ kpc, and $J_z < 0.8$ km $\rm s^{-1}$ kpc. Given these criteria, it is most likely that the association or cluster that the Sun was born in has reached dissolution and is not the commonly cited open cluster M67.
description: 12 pages, 9 figures, 3 tables, Accepted for publication in MNRAS
MOESM3 of Co-existence of virulence factors and antibiotic resistance in new Klebsiella pneumoniae clones emerging in south of Italy
Creators: name: Fasciana, Teresa
name: Gentile, Bernardina
name: Aquilina, Maria
name: Ciammaruconi, Andrea
name: Mascarella, Chiara
name: Anselmo, Anna
name: Fortunato, Antonella
name: Fillo, Silvia
name: Petralito, Giancarlo
name: Florigio Lista
name: Giammanco, Anna
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Additional file 3. wzi analysis of CR-K and CS-K. Table of contig and allele of wzi gene in K. pneumoniae CR and CS.
Language, Ethnical Identity and Consumer Behavior: A Cross-Cultural Study of Marketing Communication in the Region FVG
Creators: name: Rosa, F.
name: Sillani, S.
name: Nassivera, F.
name: Vasciaveo, M.
name: Rosa, F.
name: Sillani, S.
name: Nassivera, F.
name: Vasciaveo, M.
Publisher: name: Unknown
Year: 2014
Subjects: subject: Agribusiness
subject: Consumer/Household Economics
subject: Food Consumption/Nutrition/Food Safety
subject: food
subject: consumer behavior
subject: local languages
subject: communication
subject: involvement
subject: conjoint analysis

description: In the multiethnic EU contest, the European Institutions encourage all citizens to be multilingual by learning at least two languages in addition to their mother tongue, including the local languages to maintain alive their cultural backgrounds and preserve their ethnic identity. The objective of this study is to verify whether the local language used in marketing communication strategies could significantly affect the consumers’ preferences for food product and their decisions. The theoretical framework is given by the consumer motivational approach that enlarges the traditional consumer theory including other determinants of consumers decisions as the language and ethnicity; the empirical analysis is performed with the multivariate conjoint analysis to evaluate the influence of the cross cultural influence in consumer’s choice. A number of students from the university of Udin have been interviewed with a questionnaire focusing on preferences for a simulated packed sandwich product distributed by vendor machine inside the University space to test the influence of local language. The results suggest some reactions to the messages reported by package in different languages depending on the level of language knowledge and suggest their use for potential demand segmentation to generate niche markets. These results can be generalized to the many regional markets in the EU where the identity construct evocated by the local language can be used in market communication strategies to increase the local food demand and customization.
Generalized Quantum Search Hamiltonian
Creators: name: Bae, Joonwoo
name: Kwon, Younghun
Publisher: name: arXiv
Year: 2001
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: There are hamiltonians that solve a search problem of finding one of $N$ items in $O(\sqrt{N})$ steps. They are hamiltonians to describe an oscillation between two states. In this paper we propose a generalized search hamiltonian, $H_{g}$. Then the known search hamiltonians become special cases of $H_{g}$. From the generalized search hamiltonian, we present remarkable results that searching with 100% is subject only to the phase factor in $H_{g}$ and independent to the number of states or initialization.
description: 5 pages, Latex
Procedural conflict and conflict resolution: a cross-national study of police officers from New Zealand and South Australia
Creators: name: Hendy, Ross Edward
Publisher: name: Apollo - University of Cambridge Repository
Year: 2019
Subjects: policing
police
firearms
routinely armed police
routinely unarmed police
conflict resolution
conflict
South Australia
New Zealand
New Zealand Police
South Australian Police

description: This research takes a cross-national approach to explore how police officers attempt conflict resolution in their day-to-day activities. Using comparisons of the behaviour of routinely armed officers from South Australia and routinely unarmed officers from New Zealand, this thesis chronicles a research journey which culminates with a new theoretical framework to explain police-citizen encounters. The research took a grounded theory approach and employed a mixed methods design. Quantitative data revealed that officers from South Australia used verbal and physical control behaviours more frequently and for a higher proportion of time during encounters than during the encounters observed in New Zealand. There were no clear explanations for the differences, although there were variations in law and the profile of event-types between the research sites. The qualitative enquiry found that officers from both jurisdictions followed a similar diagnostic and treatment procedure during police-citizen encounters. Moreover, officers in both jurisdictions experienced conflict from procedural frustrations or goal blockages arising from interaction with citizens. Findings provided the context for the construction of a substantive ‘procedural conflict’ theory. This theory (1) illustrates how procedural conflict can cause a strain for officers, (2) posits that officers take corrective actions to overcome the conflict using control behaviour, and (3) explains that while officers may use force to regulate police-citizen encounters, other behaviour for resolving conflict during encounters is more common. Accordingly, procedural conflict theory provides a new framework for the explanation of the police use of force. Further theoretical propositions about police-citizen interaction are set out in the final chapter and further research to test the validity of the theory is proposed.
description: This research has been supported by the generous funding of studentships and research grants from the following sources: Studentships: - Dawes Trust Bursary - Tennant Studentship - Wakefield Scholarship Grants: - Institute of Criminology - New Zealand Police Study Grant - Scandinavian Studies Fund (University of Cambridge) - Smuts Memorial Fund (University of Cambridge) - Tennant Fund (University of Cambridge) - University of Cambridge Field Work Fund
Internal friction and Jahn-Teller effect in the charge-ordered La1-xCaxMnO3 (0.5
Creators: name: Zheng, R. K.
name: Huang, R. X.
name: Tang, A. N.
name: Li, G.
name: Li, X. G.
name: Wei, J. N.
name: Shui, J. P.
name: Yao, Z.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: The Jahn-Teller effect in the charge-ordered (CO) state for La1-xCaxMnO3 (0.5
description: 13 pages, 3 figures, PDF
A supervised exercise intervention fails to improve subjective and objective sleep measures among older adults with and without HIV
Creators: name: Hixon, Brian
name: Burgess, Helen J.
name: Wilson, Melissa P.
name: MaWhinney, Samantha
name: Jankowski, Catherine M.
name: Erlandson, Kristine M.
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Medicine
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Chronic sleep disruption can have significant negative health effects and prior studies suggest that people with HIV (PWH) have disproportionately higher rates of sleep problems. We evaluated baseline sleep of sedentary, older adults (50–75 years) with (n = 28) and without HIV (n = 29) recruited into a 24-week exercise study. Subjective sleep quality was assessed with the Pittsburgh Sleep Quality Index (PSQI); objective sleep parameters were assessed using wrist-worn actigraphy. Regression models were used to investigate changes in outcomes. Fifty-seven participants completed the intervention. At baseline, PWH had significantly lower sleep efficiency (88.7 [95% CI 86, 91]%) compared to controls (91.8 [95% CI 91, 93]%; p = 0.02); other sleep measures indicated poorer sleep among PWH but did not reach statistical significance (p ≥ 0.12). Overall, sleep outcomes did not significantly change with the exercise intervention (all p > 0.05). In adjusted analyses, PWH demonstrated a decrease in total sleep time (–22.1 [–43.7, –0.05] p = 0.045) and sleep efficiency (–1.3 [–2.5, –.01], p = 0.03) during the 24 weeks of exercise; these differences were attenuated and no longer significant after adjusting for exercise intensity. At the completion of the intervention, compared to controls, PWH had significantly poorer sleep by PSQI score (2.2 [0.6, 3.8]; p = 0.006) and sleep efficiency (–2.8 [–5.4,–0.2]%; p = 0.04). In this study, sleep disturbance was more prevalent in sedentary older PWH compared to uninfected controls. An exercise intervention had minimal effect on sleep impairments among PWH nor controls. Among older adults, interventions beyond cardiovascular and resistance exercise may be needed to significantly alter subjective and objective sleep outcomes.
Prolita solutella
Creators: name: Junnilainen, Jari
name: Karsholt, Ole
name: Nupponen, Kari
name: Kaitila, Jari-Pekka
name: Nupponen, Timo
name: Olschwang, Vladimir
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Gelechiidae
Prolita
Prolita solutella

description: Prolita solutella (Zeller, 1839)
Arkaim 14–19.VI.1996, 18.V.2004; Berlin 30. VI –02. VII.1997; Chalk Hills 03–07.VI.1998, 30.VI.2003; Kidriasovo 28–29. V.1998; Kuvandyk 13–16. VI.1998; Miass 25. V.1998; Moskovo 22–23.VI.1996, 26.V.1998, 02.VI.2004; Verbljushka 28. VI.2003; Zesnokovka 10. VI.2001. Common.
 Distribution. Widely distributed throughout Europe, apart from northernmost parts, eastwards to the Urals. Outside Europe in Turkey.
description: Published as part of Junnilainen, Jari, Karsholt, Ole, Nupponen, Kari, Kaitila, Jari-Pekka, Nupponen, Timo & Olschwang, Vladimir, 2010, The gelechiid fauna of the southern Ural Mountains, part II: list of recorded species with taxonomic notes (Lepidoptera: Gelechiidae) 2367, pp. 1-68 in Zootaxa 2367 (1) on page 43, DOI: 10.11646/zootaxa.2367.1.1, http://zenodo.org/record/10093655
Separation of Gravitational-Wave and Cosmic-Shear Contributions to Cosmic Microwave Background Polarization
Creators: name: Kesden, Michael
name: Cooray, Asantha
name: Kamionkowski, Marc
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Inflationary gravitational waves (GW) contribute to the curl component in the polarization of the CMB. Cosmic shear--gravitational lensing of the CMB-- converts a fraction of the dominant gradient polarization to the curl component. Higher-order correlations can be used to map the cosmic shear and subtract this contribution to the curl. Arcminute resolution will be required to pursue GW amplitudes smaller than those accessible by Planck. The finite cutoff in CMB power at small scales leads to a minimum detectable GW amplitude corresponding to an inflation energy near 10^15 GeV.
description: 4 pages, 2 figures; Final version accepted for publication in Phys. Rev. Lett. (Figure 1 updated to account for a numerical correction and minor changes to the text)
THE ROLE OF NETWORKING AND COMMUNITY SUPPORT IN SUSTAINING SOCIAL VENTURES IN THE INDIAN CONTEXT
Creators: name: MAMATHA A
name: Dr. CHANDRA SEN MAZUMDAR
Publisher: name: Zenodo
Year: 2025
Subjects: Social Ventures, Networking, Community Support, Sustainability, Social Entrepreneurship.

description: Abstract

The research explores the role of networking and community support in sustaining social ventures within the Indian context. Social ventures, often established to address societal issues, face unique challenges in terms of sustainability and growth. This study seeks to analyze how robust networks—spanning local communities, other social enterprises, NGOs, and governmental bodies—contribute to the resilience and longevity of these ventures. Furthermore, the study will investigate the pivotal role community support plays, particularly in fostering trust, resource mobilization, and grassroots involvement. The research aims to provide insights into best practices and strategies that can enhance the operational success of social ventures. The findings will offer actionable recommendations for social entrepreneurs and policymakers aiming to foster sustainable development through community-engaged social entrepreneurship.
Optical Spectroscopic Monitoring Observations of a T Tauri Star V409 Tau
Creators: name: Akimoto, Hinako
name: Itoh, Yoichi
Publisher: name: arXiv
Year: 2019
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: We report the results of optical spectroscopic monitoring observations of a T Tauri star, V409 Tau. A previous photometric study indicated that this star experienced dimming events due to the obscuration of light from the central star with a distorted circumstellar disk. We conducted medium-resolution (R ~10,000) spectroscopic observations with 2-m Nayuta telescope at Nishi-Harima Astronomical Observatory. Spectra were obtained in 18 nights between November 2015 and March 2016. Several absorption lines such as Ca I and Li, and the H alpha emission line were confirmed in the spectra. The Ic-band magnitudes of V409 Tau changed by approximately 1 magnitude during the observation epoch. The equivalent widths of the five absorption lines are roughly constant despite changes in the Ic-band magnitudes. We conclude that the light variation of the star is caused by the obscuration of light from the central star with a distorted circumstellar disk, based on the relationship between the equivalent widths of the absorption lines and the Ic-band magnitudes. The blue component of the H alpha emission line was dominant during the observation epoch, and an inverse P Cygni profile was observed in eight of the spectra. The time-variable inverse P Cygni profile of the H alpha emission line indicates unsteady mass accretion from the circumstellar disk to the central star.
description: 14 pages, 6 figures, accepted for publication in IJAA
Athrips nigricostella
Creators: name: Junnilainen, Jari
name: Karsholt, Ole
name: Nupponen, Kari
name: Kaitila, Jari-Pekka
name: Nupponen, Timo
name: Olschwang, Vladimir
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Gelechiidae
Athrips
Athrips nigricostella

description: Athrips nigricostella (Duponchel, 1842)
Arkaim 14–19.VI.1996, 18–19.V.2004; Guberlja 20.V.2004; Kidriasovo 28.V.1998; Kizilskoye 27.V.1998; Verbljushka 30. V –02. VI.1998, 13.V.1999, 23.V.2004, 30.V.2004. A total of 56 exx.
 Distribution. C Europe to S Ural. Recently found also in Greece (Kaitila & Junnilainen, unpublished). Outside Europe in Turkey, Kazakhstan, Kyrgyzstan and The Russian Far East (Bidzilya 2005b). The sequence of species in the genus Athrips follows that of Bidzilya (2005b).
description: Published as part of Junnilainen, Jari, Karsholt, Ole, Nupponen, Kari, Kaitila, Jari-Pekka, Nupponen, Timo & Olschwang, Vladimir, 2010, The gelechiid fauna of the southern Ural Mountains, part II: list of recorded species with taxonomic notes (Lepidoptera: Gelechiidae) 2367, pp. 1-68 in Zootaxa 2367 (1) on page 43, DOI: 10.11646/zootaxa.2367.1.1, http://zenodo.org/record/10093655
Structural studies of dynein’s interaction with microtubules and herpesvirus
Creators: name: Lacey, Samuel
Publisher: name: Apollo - University of Cambridge Repository
Year: 2020
Subjects: dynein
cryo
electron
microscopy
microtubule
herpes

description: The dynein family is a group of minus-end directed microtubule motor proteins vital for long- range cytoplasmic cargo transport and ciliary beating. The dynein heavy chain consists of an N- terminal tail domain responsible for cargo binding and dimerization, and a C-terminal motor domain. In order to move, the dynein motor cyclically binds and releases from the microtubule by changing the conformation of its microtubule-binding domain (MTBD). In chapter 3, I solve the structure of cytoplasmic and axonemal dynein MTBDs bound to microtubules by cryo-EM. From this, I present a new model of how dynein interacts with the microtubule, and a novel role of axonemal dyneins in physically distorting the microtubule. In my chapter 4, I use cryo- electron microscopy to demonstrate why dynein moves towards the minus-end and not the plus-end of microtubules. To do this, I image the structural difference between wild-type dynein and an engineered dynein that walks in reverse. Along with the work of collaborators, these results demonstrate that movement of a flexible element within the dynein motor domain called the linker is the key determinant of dynein directionality. In chapter 5, I investigate how herpes viruses hijack dynein. During cell entry, these viruses are transported by dynein over long distances from the cell periphery to the nucleus. The basis of the interaction between dynein and herpes is unknown. I use a combination of cell biology and mass-spectrometry to identify host proteins that are potentially recruited to the virus and in turn recruit dynein.
Chemical Evolution of the Circumstellar Envelopes of Carbon-rich Post-AGB objects
Creators: name: Herpin, F.
name: Goicoechea, J. R.
name: Pardo, J. R.
name: Cernicharo, J.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We have observed with the 30-m IRAM telescope, the CSO telescope and the ISOsatellite (Infrared Space Observatory) the rotational lines of CO at millimeter, submillimeter and far infrared wavelengths in the direction of C-rich stellar objects at different stages of evolution : CRL 2688 (a very young Proto-Planetary Nebula), CRL 618 (a Proto-Planetary Nebula), and NGC 7027 (a young Planetary Nebula). Several changes in the longwave emission of CO and other molecules are discussed here in relation with the degree of evolution of the objects. In the early stages, represented by CRL 2688, the longwave emission is dominated by CO lines. In the intermediate stage, CRL 618, very fast outflows are present which, together with the strong UV field from the central star, dissociate CO. The released atomic oxygen is seen via its atomic lines, and allows the formation of new O-bearing species, such as water and OH. The abundance of HNC is enhanced with respect to HCN as a result of the chemical processes occurring in the photo-dissociation region (PDR). At this stage, CO lines and [OI] lines are the dominant coolants, while the cooling effect of [CII] is rising. At the Planetary Nebula stage, NGC 7027, large parts of the old CO AGB material have been reprocessed. The spectrum is then dominated by atomic and ionic lines. New species such as CH+ appear. Water has probably been reprocessed in OH.
description: 14 pages, 4 figures, accepted in ApJ
Additional file 1 of Quality control recommendations for RNASeq using FFPE samples based on pre-sequencing lab metrics and post-sequencing bioinformatics metrics
Creators: name: Liu, Yuanhang
name: Bhagwate, Aditya
name: Winham, Stacey J.
name: Stephens, Melissa T.
name: Harker, Brent W.
name: McDonough, Samantha J.
name: Stallings-Mann, Melody L.
name: Heinzen, Ethan P.
name: Vierkant, Robert A.
name: Hoskin, Tanya L.
name: Frost, Marlene H.
name: Carter, Jodi M.
name: Pfrender, Michael E.
name: Littlepage, Laurie
name: Radisky, Derek C.
name: Cunningham, Julie M.
name: Degnim, Amy C.
name: Wang, Chen
Publisher: name: figshare
Year: 2022
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: Additional file 1. Bioinformatics evaluation of library preparation protocols using FFPE and FFzn pairs.
Thermal and quantum noise in active systems
Creators: name: Courty, Jean-Michel
name: Grassia, Francesca
name: Reynaud, Serge
Publisher: name: arXiv
Year: 2001
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We present a quantum network approach to the treatment of thermal and quantum fluctuations in measurement devices. The measurement is described as a scattering process of input fluctuations towards output ones. We present the results obtained with this method for the treatment of a cold damped capacitive accelerometer.
description: 7 pages, 4 figures, RevTeX
Athrips tetrapunctella
Creators: name: Junnilainen, Jari
name: Karsholt, Ole
name: Nupponen, Kari
name: Kaitila, Jari-Pekka
name: Nupponen, Timo
name: Olschwang, Vladimir
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Gelechiidae
Athrips
Athrips tetrapunctella

description: Athrips tetrapunctella (Thunberg, 1794)
Arkaim 18.V.2004 (1♂).
 Distribution. Northern Europe, from Great Britain to S Ural; throughout Siberia to Primorskiy kray (Bidzilya 2005b).
description: Published as part of Junnilainen, Jari, Karsholt, Ole, Nupponen, Kari, Kaitila, Jari-Pekka, Nupponen, Timo & Olschwang, Vladimir, 2010, The gelechiid fauna of the southern Ural Mountains, part II: list of recorded species with taxonomic notes (Lepidoptera: Gelechiidae) 2367, pp. 1-68 in Zootaxa 2367 (1) on page 43, DOI: 10.11646/zootaxa.2367.1.1, http://zenodo.org/record/10093655
MOESM4 of Stratified analysis of the correlation between gestational weight gain and birth weight for gestational age: a retrospective single-center cohort study in Japan
Creators: name: SATO, Noriko
name: MIYASAKA, Naoyuki
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Additional file 4: Figure S1. Inter-pregnancy difference in the BW/GA percentile
Theoretical analysis of magnetic Raman scattering in La2CuO4: two-magnon intensity with the inclusion of ring exchange
Creators: name: Katanin, A. A.
name: Kampf, A. P.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We evaluate the Raman light scattering intensity for the square lattice Heisenberg antiferromagnet with plaquette ring exchange J_\Box. With the exchange couplings as fixed before from an accurate fit to the spin-wave dispersion in La2CuO4, leading in particular to J_\Box=0.24J, we demonstrate in a parameter free calculation that the inclusion of the plaquette exchange contribution to the dispersion and the magnon-magnon interaction vertex gives a peak position in $B_{1g}$ scattering geometry E_max = 2.71J which is in excellent agreement with the experimental data. Yet, the intrinsic width and the lineshape of the two-magnon remain beyond a descriptions in terms of a spin-only Hamiltonian.
description: 4 pages, 2 figures, RevTex
Additional file 2 of Quality control recommendations for RNASeq using FFPE samples based on pre-sequencing lab metrics and post-sequencing bioinformatics metrics
Creators: name: Liu, Yuanhang
name: Bhagwate, Aditya
name: Winham, Stacey J.
name: Stephens, Melissa T.
name: Harker, Brent W.
name: McDonough, Samantha J.
name: Stallings-Mann, Melody L.
name: Heinzen, Ethan P.
name: Vierkant, Robert A.
name: Hoskin, Tanya L.
name: Frost, Marlene H.
name: Carter, Jodi M.
name: Pfrender, Michael E.
name: Littlepage, Laurie
name: Radisky, Derek C.
name: Cunningham, Julie M.
name: Degnim, Amy C.
name: Wang, Chen
Publisher: name: figshare
Year: 2022
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: Additional file 2. Evaluation of sample size on the calculation of sample wise median correlation.
Baryonic coherent state formation from small domain disoriented chiral condensates
Creators: name: Wong, Stephen M. H.
name: Kapusta, Joseph I.
Publisher: name: arXiv
Year: 2002
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Nuclear Experiment (nucl-ex)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: Rare hyperon yields such as the Omega and AntiOmega in heavy ion collision experiments are hard to be reproduced by numerical models. This, in combination with the thermal fit to SPS data, seems to call for a new production mechanism beyond the usual ones. Small domain disoriented chiral condensates (DCC) were proposed to be such a source of rare hyperons through skyrmion formation at the chiral phase transition. Here skyrmions are treated as coherent states of baryons on a compact manifold so that the distribution of baryons produced from a skyrmion can be known. From this more refined treatment, the number of topological defects produced are more than doubled to 30 or more and the domain size at the SPS is found to be even smaller than before at 1.1--1.5 fm. IT IS IMPERATIVE THEREFORE NOT TO USE ONLY PION DISTRIBUTION BUT OTHER MEANS FOR OBSERVING DCC.
description: Talk presented at Quark Matter 2002, Nantes, France, July 2002, to appear in the proceedings
Examining the association between stress and antiretroviral therapy adherence among women living with HIV in Toronto, Ontario
Creators: name: Benoit, Anita C.
name: Burchell, Ann N.
name: O’Brien, Kelly K.
name: Raboud, Janet
name: Gardner, Sandra
name: Light, Lucia
name: Kerrigan Beaver
name: Cotnam, Jasmine
name: Conway, Tracey
name: Price, Colleen
name: Rourke, Sean B.
name: Rueda, Sergio
name: Hart, Trevor A.
name: Loutfy, Mona
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Medicine
subject: Cell Biology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases

description: We aimed to identify the association between stress and antiretroviral therapy (ART) adherence among women in HIV care in Toronto, Ontario participating in the Ontario HIV Treatment Network Cohort Study (OCS) between 2007 and 2012. We conducted cross-sectional analyses with women on ART completing the AIDS Clinical Trial Group (ACTG) Adherence Questionnaire. Data closest to, or at the last completed interview, were collected from medical charts, through record linkage with Public Health Ontario Laboratories, and from a standardized self-reported questionnaire comprised of socio-demographic and psycho-socio-behavioral measures (Center for Epidemiologic Studies Depression Scale (CES-D), Alcohol Use Disorders Identification Test (AUDIT)), and stress measures (National Population Health Survey). Logistic regression was used to quantify associations with optimal adherence (≥95% adherence defined as missing ≤ one dose of ART in the past 4 weeks). Among 307 women, 65.5% had optimal adherence. Women with suboptimal compared to optimal adherence had higher median total stress scores (6.0 [interquartile range (IQR): 3.0–8.1] vs. 4.1 [IQR: 2.0–7.1], p = 0.001), CES-D scores (16 [IQR: 6–28] vs. 12 [IQR: 3–22], p = 0.008) and reports of hazardous and harmful alcohol use (31.1% vs. 17.9%, p = 0.008). In our multivariable model, we found an increased likelihood of optimal adherence with the absence of hazardous and harmful alcohol use (Adjusted Odds Ratio (AOR)=2.20, 95% confidence interval (CI): 1.12–4.32) and a decreased likelihood of optimal adherence with more self-reported stress (AOR = 0.56, 95% CI: 0.33–0.94). Interventions supporting optimal ART adherence should address stress and include strategies to reduce or eliminate hazardous and harmful alcohol use for women living with HIV.
AI and Accessibility: A Discussion of Ethical Considerations
Creators: name: Morris, Meredith Ringel
Publisher: name: arXiv
Year: 2019
Subjects: subject: Computers and Society (cs.CY)
subject: Artificial Intelligence (cs.AI)
subject: Human-Computer Interaction (cs.HC)
subject: FOS: Computer and information sciences

description: According to the World Health Organization, more than one billion people worldwide have disabilities. The field of disability studies defines disability through a social lens; people are disabled to the extent that society creates accessibility barriers. AI technologies offer the possibility of removing many accessibility barriers; for example, computer vision might help people who are blind better sense the visual world, speech recognition and translation technologies might offer real time captioning for people who are hard of hearing, and new robotic systems might augment the capabilities of people with limited mobility. Considering the needs of users with disabilities can help technologists identify high-impact challenges whose solutions can advance the state of AI for all users; however, ethical challenges such as inclusivity, bias, privacy, error, expectation setting, simulated data, and social acceptability must be considered.
description: Preprint of a "Viewpoint" column that was published in the Communications of the ACM in May/June 2020
On the Statistical Treatment of the Cabibbo Angle Anomaly
Creators: name: Grossman, Yuval
name: Passemar, Emilie
name: Schacht, Stefan
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We point out that testing the equality of the Cabibbo angle as extracted from $Γ(K\rightarrow πlν)$, the ratio $Γ(K\rightarrow lν)/Γ(π\rightarrow lν)$ and nuclear $β$ decays is not identical to a test of first row unitarity of the Cabibbo-Kobayashi-Maskawa (CKM) matrix. The reason is that a CKM unitarity test involves only two parameters, while the degrees of freedom for the assessment of the goodness-of-fit of the universality of the Cabibbo angle entailed by the Standard Model (SM) is equal to the number of measurements minus one. Beyond the SM all different processes could in principle give different Cabibbo angles. Consequently, the difference between the two tests becomes relevant starting from three observables giving results for the Cabibbo angle that are in tension with each other. With current data, depending on the treatment of the nuclear $β$ decays, we find that New Physics is favored over the SM at $5.1\,σ$ or $3.6\,σ$ while CKM unitarity is rejected at $4.8σ$ or $3.0σ$, respectively. We argue that the best method to test the SM is to test the equality of the Cabibbo angle, because CKM unitarity is only one aspect of the SM.
description: 15 pages, 1 figure. Matches published version
Athrips amoenella
Creators: name: Junnilainen, Jari
name: Karsholt, Ole
name: Nupponen, Kari
name: Kaitila, Jari-Pekka
name: Nupponen, Timo
name: Olschwang, Vladimir
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Gelechiidae
Athrips
Athrips amoenella

description: Athrips amoenella (Frey, 1882)
Guberlja 20.V.2004; Kidriasovo 28–29.V.1998; Miass 25.V.1998, 07–20.V.2005; Verbljushka 30. V – 02. VI.1998, 13.V.1999, 24.V.2004, 07.V.2005. Genitalia slide: K. Nupponen 3/ 28.II.2001. A total of 23 exx.
 Distribution. A. amoenella until recently was found very locally in C Europe. During the last two decades it has turned up in a number of European countries, first in Sweden and Finland, and then in S Ural. Recently it was found for the first time in Greece (Junnilainen & Karsholt, unpublished) and also from Turkey (K. Nupponen, Junnilainen & Karsholt, unpublished). Also in Kazakhstan and Kyrgyzstan (Bidzilya 2005b).
description: Published as part of Junnilainen, Jari, Karsholt, Ole, Nupponen, Kari, Kaitila, Jari-Pekka, Nupponen, Timo & Olschwang, Vladimir, 2010, The gelechiid fauna of the southern Ural Mountains, part II: list of recorded species with taxonomic notes (Lepidoptera: Gelechiidae) 2367, pp. 1-68 in Zootaxa 2367 (1) on page 43, DOI: 10.11646/zootaxa.2367.1.1, http://zenodo.org/record/10093655
Probing Massive Scalar Fields from a Pulsar in a Stellar Triple System
Creators: name: Seymour, Brian C.
name: Yagi, Kent
Publisher: name: arXiv
Year: 2019
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: Pulsar timing observations precisely test general relativity. Recently, the hierarchical triple system PSR J0337+1715 has placed new constraints on the existence of a fifth force from violation in the strong equivalence principle. Many alternative gravity theories exist with massive (pseudo-)scalar fields to explain a variety of phenomena from the accelerating expansion of the universe at large scales to the QCD strong CP problem at small scales. We here develop a generic formalism for the fifth force effect in theories involving massive scalar fields arising from e.g. string theory. With PSR J0337 measurements, we find the strongest bound on the simplest theory with a massive scalar field beyond general relativity and derive new constraints in other theories with axions, dark matter mediators, and higher-curvature corrections. These results show that the triple system J0337 provides a stringent test for massive scalar fields.
description: 5 figures, 14 pages
Athrips stepposa Bidzilya 2005
Creators: name: Junnilainen, Jari
name: Karsholt, Ole
name: Nupponen, Kari
name: Kaitila, Jari-Pekka
name: Nupponen, Timo
name: Olschwang, Vladimir
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Gelechiidae
Athrips
Athrips stepposa

description: Athrips stepposa Bidzilya, 2005
Ajat river 03–05.VII.1997 (1♀); Arkaim 22.VII.1998 (1♂), 18.V.2004 (1♂, 5♀), 19.V.2004 (21♂♂, 16♀); Guberlja 20.V.2004 (1♂, 2♀); Kidriasovo 28.V.1998 (1♂, 1♀), 29.V.1998 (1♂); Kizilskoye 27.V.1998 (2♂♂, 2♀); Kuvandyk 20.VII.1998 (1♂, 3♀); Miass 25.V.1998 (1♂); Verbljushka 11.VI.1998 (1♂). Genitalia slides: J. Junnilainen prep. no. 00022701, 02011909, 02011910, 02011911, 02012004.
 Distribution. Ukraine and Russia (S Ural) (Bidzilya 2005b). Outside Europe in Siberia (Tuva).
description: Published as part of Junnilainen, Jari, Karsholt, Ole, Nupponen, Kari, Kaitila, Jari-Pekka, Nupponen, Timo & Olschwang, Vladimir, 2010, The gelechiid fauna of the southern Ural Mountains, part II: list of recorded species with taxonomic notes (Lepidoptera: Gelechiidae) 2367, pp. 1-68 in Zootaxa 2367 (1) on page 43, DOI: 10.11646/zootaxa.2367.1.1, http://zenodo.org/record/10093655