cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Ax-Schanuel and strong minimality for the $j$-function
Creators: name: Aslanyan, Vahagn
Publisher: name: arXiv
Year: 2018
Subjects: subject: Logic (math.LO)
subject: FOS: Mathematics

description: Let $\mathcal{K}:=(K;+,\cdot, D, 0, 1)$ be a differentially closed field of characteristic $0$ with field of constants $C$. In the first part of the paper we explore the connection between Ax-Schanuel type theorems (predimension inequalities) for a differential equation $E(x,y)$ and the geometry of the fibres $U_s:=\{ y:E(s,y) \wedge y \notin C \}$ where $s$ is a non-constant element. We show that certain types of predimension inequalities imply strong minimality and geometric triviality of $U_s$. Moreover, the induced structure on the Cartesian powers of $U_s$ is given by special subvarieties. In particular, since the $j$-function satisfies an Ax-Schanuel inequality of the required form (due to Pila and Tsimerman), applying our results to the $j$-function we recover a theorem of Freitag and Scanlon stating that the differential equation of $j$ defines a strongly minimal set with trivial geometry. In the second part of the paper we study strongly minimal sets in the $j$-reducts of differentially closed fields. Let $E_j(x,y)$ be the (two-variable) differential equation of the $j$-function. We prove a Zilber style classification result for strongly minimal sets in the reduct $\mathsf{K}:=(K;+, \cdot, E_j)$. More precisely, we show that in $\mathsf{K}$ all strongly minimal sets are geometrically trivial or non-orthogonal to $C$. Our proof is based on the Ax-Schanuel theorem and a matching Existential Closedness statement which asserts that systems of equations in terms of $E_j$ have solutions in $\mathsf{K}$ unless having a solution contradicts Ax-Schanuel.
description: 27 pages. This is a combination of arXiv:1606.01778v3 and arXiv:1805.03985v1 (with substantial revisions)
Pairing Gap and Polarisation Effects
Creators: name: Rutz, K.
name: Bender, M.
name: Reinhard, P. -G.
name: Maruhn, J. A.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: The phenomenological adjustment of the nuclear pairing strength is usually performed with respect to the odd-even staggering of the binding energies. We find that the results strongly depend on the way in which the ground states of the odd nuclei are computed. A thorough calculation including all time-even and time-odd polarisation effects induced by the odd nucleon produces about 30% reduced odd-even staggering as compared to the standard spherical calculations in the relativistic mean-field model. The pairing strength must be enhanced by about 20% to compensate for that effect. The enhanced strength has dramatic consequences for the predicted deformation properties of the underlying mean-field models, possibly implying that new adjustments of their parameters become necessary as well.
description: 5 pages REVTeX, 5 eps figures, accepted for publication in Phys. Lett. B
Additional file 3 of Zmynd11 is essential for neurogenesis by coordinating H3K36me3 modification of Epha2 and PI3K signaling pathway
Creators: name: Yang, Xu
name: Li, Lan
name: Qu, Wenzheng
name: Cheng, Xuejun
name: Zhang, Jinyu
name: Sun, Yan
name: Liu, Suxiao
name: Peng, Guoping
name: Zheng, Rui
name: Li, Xuekun
Publisher: name: figshare
Year: 2025
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Developmental Biology
subject: Mental Health

description: Supplementary material 3: Table S2. The used primers
Supplementary document for Few-cycle pulse retrieval using amplitude swing technique - 7016085.pdf
Creators: name: Lopez, Miguel
name: Perez, Oscar
name: Alonso, Benjamín
name: Weigand, Rosa
name: Sola, Íñigo
Publisher: name: Optica Publishing Group
Year: 2024
Subjects: Uncategorized

description: Supplemental material
title: Préface_L'imprimerie en Champagne et en Brie au XVe siècle suivie de notes et pièces extraites des archives de l'Aube et de la Bibliothèque nationale
Creators: name: AmateurS
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2021

description: Préface
description: ID_PARA_01011
Simulation of muon-induced neutral particle background for a shallow depth Iron Calorimeter detector
Creators: name: Panchal, Neha
name: Majumder, G.
name: Datar, V. M.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Instrumentation and Detectors (physics.ins-det)
subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: The Iron Calorimeter (ICAL) detector at the India based Neutrino Observatory (INO) is planned to be set up in an underground cavern with a rock overburden of more than 1 km. This overburden reduces the cosmic muon flux by a factor of 10$^{6}$ with respect to that at sea level. In this paper, we examine the possibility of a 100 m shallow depth ICAL (SICAL) detector. The cosmic muons would have to be detected in a veto detector surrounding ICAL with an efficiency of 99.99 % in order to have the same level of muon background leaking undetected through the veto detector as at the 1 km depth underground site. However, an additional background arises from interactions of cosmic muons with the rock. Since the neutral particles produced in such interactions can pass through the veto detector without any interaction, they can possibly mimic neutrino events in ICAL. In this paper, the results of a GEANT4 based simulation study to estimate the background signals due to muon induced interactions with the rock for SICAL are presented.
Can Galactic Observations Be Explained by a Relativistic Gravity Theory?
Creators: name: Zhytnikov, Vadim V.
name: Nester, James M.
Publisher: name: arXiv
Year: 1994
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We consider the possibility of an alternative gravity theory explaining the dynamics of galactic systems without dark matter. From very general assumptions about the structure of a relativistic gravity theory we derive a general expression for the metric to order $(v/c)^2$. This allows us to compare the predictions of the theory with various experimental data: the Newtonian limit, light deflection and retardation, rotation of galaxies and gravitational lensing. Our general conclusion is that the possibility for any gravity theory to explain the behaviour of galaxies without dark matter is rather improbable.
description: 12p, REVTeX 3.0
Breakup of $^8$B and the $^7$Be($p,γ)^8$B reaction
Creators: name: Shyam, R.
name: Thompson, I. J.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: The calculated rate of events in some of the existing solar neutrino detectors is directly proportional to the rate of the $^7$Be($p,γ)^8$B reaction measured in the laboratory at low energies. However, the low-energy cross sections of this reaction are quite uncertain as various measurements differ from each other by 30-40 %. The Coulomb dissociation process which reverses the radiative capture by the dissociation of $^8$B in the Coulomb field of a target, provides an alternate way of accessing this reaction. While this method has several advantages (like large breakup cross sections and flexibility in the kinematics), the difficulties arise from the possible interference by the nuclear interactions, uncertainties in the contributions of the various multipoles and the higher order effects, which should be considered carefully. We review the progress made so far in the experimental measurements and theoretical analysis of the breakup of $^8$B and discuss the current status of the low-energy cross sections (or the astrophysical $S$-factor) of the $^7$Be($p,γ)^8$B reaction extracted therefrom. The future directions of the experimental and theoretical investigations are also suggested.
description: 13 pages, 6 figures, accepted for Pramana (Indian Journal of Physics) for proceedings of International workshop on Rare Nuclear Processes in the Low Energy Heavy ion collisions, New Delhi, November 1998. Uses IOPConf.sty (included)
Initial Data for General Relativity with Toroidal Conformal Symmetry
Creators: name: Beig, Robert
name: Husa, Sascha
Publisher: name: arXiv
Year: 1994
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: A new class of time-symmetric solutions to the initial value constraints of vacuum General Relativity is introduced. These data are globally regular, asymptotically flat (with possibly several asymptotic ends) and in general have no isometries, but a $U(1)\times U(1)$ group of conformal isometries. After decomposing the Lichnerowicz conformal factor in a double Fourier series on the group orbits, the solutions are given in terms of a countable family of uncoupled ODEs on the orbit space.
description: REVTEX, 9 pages, ESI Preprint 126
Studying the $ωN$ elastic and inelastic cross section with nucleons
Creators: name: Golubeva, Ye. S.
name: Cassing, W.
name: Kondratyuk, L. A.
name: Sibirtsev, A.
name: Büscher, M.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We explore the possibility to measure the elastic and inelastic $ωN$ cross section in $p{+}d{\to}d{+}ω{+}p_{sp}$ and $p{+}A$ reactions. Our studies indicate that the elastic scattering cross sections can be determined for $ω$ momenta above 1 GeV/c in $p{+}d$ reactions by gating on high proton spectator momenta whereas the $ωN$ absorption cross section down to low relative $ω$ momenta is most effectively studied in $p{+}A$ reactions at beam energies 2.0--2.7 GeV
description: 7 pages, svjour-style, including 9 ps-figures
Additional file 1: of Anti-hypertensive medications and injurious falls in an older population of low socioeconomic status: a nested case-control study
Creators: name: Zafirah Banu
name: Lim, Ka
name: Kwan, Yu
name: Yap, Kai
name: Ang, Hui
name: Chuen Tan
name: Fong, Warren
name: Thumboo, Julian
name: Kheng Lee
name: Ostbye, Truls
name: Low, Lian
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy

description: Results of sensitivity analyses. The file contains two tables (Tables S1 and S2) presenting the results of the sensitivity analyses (stepwise regression). (DOCX 17 kb)
On the topology of stationary black holes
Creators: name: Chrusciel, P. T.
name: Wald, R. M.
Publisher: name: arXiv
Year: 1994
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We prove that the domain of outer communication of a stationary, globally hyperbolic spacetime satisfying the null energy condition must be simply connected. Under suitable additional hypotheses, this implies, in particular, that each connected component of a cross-section of the event horizon of a stationary black hole must have spherical topology.
description: 7 pages, Latex
Additional file 4 of Zmynd11 is essential for neurogenesis by coordinating H3K36me3 modification of Epha2 and PI3K signaling pathway
Creators: name: Yang, Xu
name: Li, Lan
name: Qu, Wenzheng
name: Cheng, Xuejun
name: Zhang, Jinyu
name: Sun, Yan
name: Liu, Suxiao
name: Peng, Guoping
name: Zheng, Rui
name: Li, Xuekun
Publisher: name: figshare
Year: 2025
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Developmental Biology
subject: Mental Health

description: Supplementary material 4: Table S3. The used antibodies
Quark mass functions and pion structure in the Covariant Spectator Theory
Creators: name: Biernat, E. P.
name: Gross, F.
name: Peña, M. T.
name: Stadler, A.
name: Leitão, S.
Publisher: name: arXiv
Year: 2018
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: The Covariant Spectator Theory is applied to the description of quarks and the pion. The dressed quark mass function is calculated dynamically in Minkowski space and used in the calculation of the pion electromagnetic form factor. The effects of the mass function on the pion form factor and the different quark-pole contributions to the triangle diagram are analyzed.
description: 7 pages, 5 figues, submitted to Few-Body Syst
Configuration mixing of mean-field wave-functions projected on angular momentum and particle number; application to 24Mg
Creators: name: Valor, A.
name: Heenen, P. -H.
name: Bonche, P.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We present in this paper the general framework of a method which permits to restore the rotational and particle number symmetries of wave functions obtained in Skyrme HF+BCS calculations. This restoration is nothing but a projection of mean-field intrinsic wave functions onto good particle number and good angular momentum. The method allows also to mix projected wave functions. Such a configuration mixing is discussed for sets of HF+BCS intrinsic states generated in constrained calculations with suitable collective variables. This procedure gives collective states which are eigenstates of the particle number and the angular momentum operators and between which transition probabilities are calculated. An application to 24Mg is presented, with mean-field wave functions generated by axial quadrupole constraints. Theoretical spectra and transition probabilities are compared to the experiment.
description: 26 pages, 7 figures. Submitted to Nuclear Physics
Kelvin-Helmholtz instability in an atomic superfluid
Creators: name: Baggaley, A. W.
name: Parker, N. G.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences

description: We demonstrate an experimentally feasible method for generating the classical Kelvin-Helmholtz instability in a single component atomic Bose-Einstein condensate. By progressively reducing a potential barrier between two counter-flowing channels we seed a line of quantised vortices, which precede to form progressively larger clusters, mimicking the classical roll-up behaviour of the Kelvin-Helmholtz instability. This cluster formation leads to an effective superfluid shear layer, formed through the collective motion of many quantised vortices. From this we demonstrate a straightforward method to measure the effective viscosity of a turbulent quantum fluid in a system with a moderate number of vortices, within the range of current experimental capabilities.
description: 7 pages, 8 figures
Additional file 3: of Automatic evaluation of tumor budding in immunohistochemically stained colorectal carcinomas and correlation to clinical outcome
Creators: name: Cleo-Aron Weis
name: Kather, Jakob
name: Melchers, Susanne
name: Al-Ahmdi, Hanaa
name: Pollheimer, Marion
name: Langner, Cord
name: Gaiser, Timo
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Cell Biology
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Cancer

description: Pseudocode 1 create TMA-map. Pseudocode 2 combine TMA-maps of different staining. Pseudocode 3 image analysis part I. Pseudocode 4 image analysis part II. (DOCX 16 kb)
การเชื่อมโยงสุนทรียศาสตร์ทางนาฏยศิลป์ตะวันตกกับผู้บริโภค
Creators: name: ธนกร สรรย์วราภิภู
Publisher: name: คณะมนุษยศาสตร์และสังคมศาสตร์ มหาวิทยาลัยราชภัฏบ้านสมเด็จเจ้าพระยา
Year: 2560
Subjects: Aesthetics, Consumers, Dance, นาฏยศิลป์, ผู้บริโภค, สุนทรียศาสตร์

description: วารสารมนุษยศาสตร์และสังคมศาสตร์ มหาวิทยาลัยราชภัฏบ้านสมเด็จเจ้าพระยา, 11, 2, 91-109
Circular RNA_0120376 regulates microRNA-148b-3 and centrosomal protein 55 to promote non-small cell lung cancer development
Creators: name: Du, Tiantian
name: Yi, Shenni
name: Wang, Yuanyuan
name: Zhao, Qiang
name: Ma, Ping
name: Jiang, Wei
Publisher: name: Taylor & Francis
Year: 2022
Subjects: Biophysics
Biochemistry
Physical Sciences not elsewhere classified
Cell Biology
Molecular Biology
Pharmacology
Biological Sciences not elsewhere classified
Cancer
Hematology

description: Circular RNAs (circRNAs) are non-coding RNAs with covalent closed-loop structures that are vital in regulating diverse pathological processes. This work is aimed to investigate the role of circ_0120376 in non-small cell lung cancer (NSCLC). Circ_0120376, microRNA (miR)-148b-3p, and centrosomal protein 55 (CEP55) mRNA expression in NSCLC tissues and cells were determined using qRT-PCR. The influences of circ_0120376 and miR-148b-3p on the proliferation of NSCLC cell lines were analyzed by CCK-8 and colony formation assays. Apoptosis was analyzed by flow cytometry. Cell migration and invasion were analyzed using the Transwell experiment. Binding relationships between circ_0120376 and miR-148b-3p and between miR-148b-3p and CEP55 3'UTR were investigated using the dual-luciferase reporter experiment and the RIP experiment. Western blot was conducted to analyze the regulatory effect of circ_0120376 and miR-148b-3p on CEP55 expression. We found that circ_0120376 was markedly overexpressed in NSCLC, and its overexpression was positively associated with increased T stage and lymph node metastasis of the patients. Functional experiments unveiled that circ_0120376 enhanced the proliferation, migration and invasion of NSCLC cells and impeded apoptosis, while knocking down circ_0120376 remarkably suppressed the malignant features of NSCLC cells mentioned above. Circ_0120376 could adsorb miR-148b-3p to reduce miR-148b-3p expression, and circ_0120376 could increase CEP55 expression via adsorbing miR-148b-3p. In summary, circ_0120376 contributes to the malignancy of NSCLC cells through a ceRNA mechanism via regulating miR-148b-3p/CEP55 axis. Circ_0120376 is likely to be a potential diagnostic biomarker and therapeutic target for NSCLC.
Conservation Laws in the Quantum Mechanics of Closed Systems
Creators: name: Hartle, James B.
name: Laflamme, Raymond
name: Marolf, Donald
Publisher: name: arXiv
Year: 1994
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We investigate conservation laws in the quantum mechanics of closed systems. We review an argument showing that exact decoherence implies the exact conservation of quantities that commute with the Hamiltonian including the total energy and total electric charge. However, we also show that decoherence severely limits the alternatives which can be included in sets of histories which assess the conservation of these quantities when they are not coupled to a long-range field arising from a fundamental symmetry principle. We then examine the realistic cases of electric charge coupled to the electromagnetic field and mass coupled to spacetime curvature and show that when alternative values of charge and mass decohere, they always decohere exactly and are exactly conserved as a consequence of their couplings to long-range fields. Further, while decohering histories that describe fluctuations in total charge and mass are also subject to the limitations mentioned above, we show that these do not, in fact, restrict {\it physical} alternatives and are therefore not really limitations at all.
description: 22 pages, report UCSBTH-94-4, LA-UR-94-2101, CGPG-94/10-1
Additional file 8 of iTRAQ-based quantitative proteomics analysis of cantaloupe (Cucumis melo var. saccharinus) after cold storage
Creators: name: Song, Wen
name: Tang, Fengxian
name: Cai, Wenchao
name: Zhang, Qin
name: Zhou, Fake
name: Ning, Ming
name: Tian, Huan
name: Shan, Chunhui
Publisher: name: figshare
Year: 2020
Subjects: subject: Biophysics
subject: Biochemistry
subject: Physical Sciences not elsewhere classified
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Pharmacology
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Plant Biology
subject: Virology

description: Additional file 8: Table S7. The sequences of specific primers used for q-PCR analysis.
Liftoff: A pipeline for mapping genes onto high-quality genome assemblies
Creators: name: Shumate, Alaina
name: Salzberg, Steven L.
Publisher: name: F1000 Research Limited
Year: 2019

description: Long–read sequencing and advanced computational methods have enabled rapid assembly of high quality genomes. Finding genes in these new assemblies is a necessary step to understating biologically important genetic variation within species. In organisms with an existing annotation, this is most easily done by lifting over the reference annotation onto the new assembly. Existing tools work by aligning full chromosomes to one another to find long syntenic regions, which only works well
when the genomes are very similar. Also, these tools lift over each chromosomal interval individually which often results in exons mapping at locations that are inconsistent with the gene model, or homologous features mapping to the same locus. Liftoff overcomes these challenges by aligning gene sequences rather than full chromosomes and by considering the complete annotation when lifting over features. While many genes have a single complete alignment, others align in pieces or to many locations. When choosing the best mapping for these genes, Liftoff considers sequence identity, as well as the location of neighboring features and already-mapped homologs. Liftoff successfully mapped 99.6% of genes from the human genome version GRCh37 to GRCh38. To confirm that these mappings are correct, we checked the translation of the coding sequences and found that 98.6% of them match GRCh37 exactly.
Wettability-independent droplet transport by \emph{Bendotaxis}
Creators: name: Bradley, Alexander T.
name: Box, Finn
name: Hewitt, Ian J.
name: Vella, Dominic
Publisher: name: arXiv
Year: 2018
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences

description: We demonstrate \textit{bendotaxis}, a novel mechanism for droplet self-transport at small scales. A combination of bending and capillarity in a thin channel causes a pressure gradient that, in turn, results in the spontaneous movement of a liquid droplet. Surprisingly, the direction of this motion is always the same, regardless of the wettability of the channel. We use a combination of experiments at a macroscopic scale and a simple mathematical model to study this motion, focussing in particular on the time scale associated with the motion. We suggest that \emph{bendotaxis} may be a useful means of transporting droplets in technological applications, for example in developing self-cleaning surfaces, and discuss the implications of our results for such applications.
description: 5 pages, 4 figures. Supplementary Information available on request
The Quark-Photon Vertex and the Pion Charge Radius
Creators: name: Maris, P.
name: Tandy, P. C.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: The rainbow truncation of the quark Dyson-Schwinger equation is combined with the ladder Bethe-Salpeter equation for the dressed quark-photon vertex to study the low-momentum behavior of the pion electromagnetic form factor. With model gluon parameters previously fixed by the pion mass and decay constant, the pion charge radius $r_π$ is found to be in excellent agreement with the data. When the often-used Ball-Chiu Ansatz is used to construct the quark-photon vertex directly from the quark propagator, less than half of $r_π^2$ is generated. The remainder of $r^2_π$ is seen to be attributable to the presence of the $ρ$-pole in the solution of the ladder Bethe-Salpeter equation.
description: 21 pages, 9 figures
Retrieving the Size of Deep-subwavelength Objects via Tunable Optical Spin-Orbit Coupling
Creators: name: Xi, Zheng
name: Urbach, H. P.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: We propose a scheme to retrieve the size parameters of a nano-particle on a glass substrate at a scale much smaller than the wavelength. This is achieved by illuminating the particle using two plane waves to create rich and non-trivial local polarization distributions, and observing the far-field scattering pattern into the substrate. A simple dipole model which exploits tunneling effect of evanescent field into regions beyond the critical angle, as well as directional scattering due to spin-orbit coupling is developed, to relate the particle's shape, size and position to the far-field scattering with remarkable sensitivity. Our method brings about a far-field super-resolution imaging scheme based on the interaction of vectorial light with nanoparticles.
Additional file 1 of Soyasaponins reduce inflammation by downregulating MyD88 expression and suppressing the recruitments of TLR4 and MyD88 into lipid rafts
Creators: name: Chen, Junbin
name: Ullah, Hidayat
name: Zheng, Zhongdaixi
name: Gu, Xiangfu
name: Su, Chuhong
name: Xiao, Lingyu
name: Wu, Xinglong
name: Xiong, Fei
name: Li, Qing
name: Zha, Longying
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1 Table S1. The inflammatory markers in serum of LPS-challenged ICR mice. Table S2. Effects of soyasaponins on the mRNA expression of inflammatory markers in the liver tissues of LPS-challenged ICR mice.
New Three-Nucleon-Force Terms in the Three-Nucleon System
Creators: name: Hüber, D.
name: Friar, J. L.
name: Nogga, A.
name: Witala, H.
name: van Kolck, U.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We include two new three-nucleon-force terms of pion-range - short-range form in our momentum-space calculations for the three-nucleon continuum. These two terms are expected by chiral perturbation theory to be non-negligible. We study the effects of these terms in elastic neutron-deuteron scattering and pay special attention to the neutron vector analyzing power $A_y$.
description: 27 pages, latex, 8 figures - fbsart11.sty required - Submitted to Few-Body Systems - Dedicated to the 60th birthday of Walter Gl\"ockle
MOESM1 of Phosphorylation of TET2 by AMPK is indispensable in myogenic differentiation
Creators: name: Zhang, Ting
name: Guan, Xiaowen
name: Choi, Un
name: Dong, Qiang
name: Lam, Melody
name: Zeng, Jianming
name: Xiong, Jun
name: Wang, Xianju
name: Poon, Terence
name: Zhang, Hongjie
name: Zhang, Xuanjun
name: Wang, Hailin
name: Xie, Ruiyu
name: Zhu, Bing
name: Li, Gang
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Hematology

description: Additional file 1. Fig. S1. SDS-PAGE analysis of the recombinant N-terminus of murine TET2 (aa 1-181) and its mutant. Fig. S2. AMPK knockout impaired the differentiation of C2C12 cells. Fig. S3. Gene ontology analysis of upregulated genes between AMPK-KO and wild-type C2C12 cells at myoblast- (differentiation d0, A) or myotube- stage (differentiation d8, B). Fig. S4. Increased DNA methylation at a potential intragenic enhancer of Pax7. Fig. S5. CRISPR/Cas9-mediated deletion of the Pax7 intragenic enhancer in C2C12 cells. Fig. S6. Knocking in (KI) the pS97E mutation of Tet2 in AMPK-/- C2C12 cells. Fig. S7. S97E mutation of TET2 partly rescues the differentiation defect of the AMPK-/- C2C12 cells. Fig. S8. Increased myosin heavy chain (MHC) expression in AMPK-/- C1C12 cells rescued with TET2 harboring S97E. Table S1. ELISA analysis of pTET2 [Ser99 (h); Ser97(m)] antibodies*. Table S3. Antibodies. Table S4: Primers and Oligos.
Additional file 1: of Growing gold nanostructures for shape-selective cellular uptake
Creators: name: Sulalit Bandyopadhyay
name: McDonagh, Birgitte
name: Gurvinder Singh
name: Raghunathan, Karthik
name: Sandvig, Axel
name: Sandvig, Ioanna
name: Jens-Petter Andreassen
name: Glomm, Wilhelm
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Cell Biology
subject: Biotechnology
subject: Developmental Biology
subject: Cancer

description: Figure S1. STEM image of Au NRs grown from the solution of (a) low OA concentration (i.e., OA CTAB ~ 10:1) and (b) low ascorbic acid concentration (60 μL of 63 mM). Figure S2. Histograms of differently shaped AuNSs obtained from representative STEM images, showing relative population percentages of (a), (b) nanorods (NRs) (c), (d) tetrahexahedra (THH) (e), (f) nanomakura (NM) (g), (h) bipyramids (BPs), and (i) spheres (SPs). Figure S3. UV-Vis spectra of (a) nanorods (NRs), (b) tetrahexahedra (THH), (c) nanomakura (NM), (d) bipyramids (BPs), and (e) spheres (SPs) after each stage of functionalization. Figure S4. Superimposed images of differently shaped AuNSs after 24-hour co-incubation with glioblastoma-astrocytoma cells. The column to the far left show the halogen images, the middle column shows the cells stained with calcein, while the column to the far right show the superimposed images taken of the cell nuclei (white). Images (a)–(c) show glioblastoma cells incubated with nanorods (NRs), (d)–(f) spheres (SPs), (g)–(i) bipyramids (BPs), (j)–(l) tetrahexahedra (THH), and (m)–(o) nanomakura (NM). Figure S5. Images of nanomakura NSs co-incubated with glioblastoma-astrocytoma cells as a function of time. The column to the far left shows the halogen images; the middle column shows the cells stained with calcein, except image q. The column to the far right shows the superimposed images taken of the cell nuclei (white). Images (a)–(c) were taken after 2 h, (d)–(f) 6 h, (g)–(i) 12 h, (j)–(l) 24 h, (m)–(o): 48 h, and (p)–(r): 72 h of co-incubation. Images (s)–(u) show glioblastoma-astrocytoma cells not incubated with any NSs. (DOCX 2861 kb)
The silver route to cuprate analogs
Creators: name: Gawraczyński, Jakub
name: Kurzydłowski, Dominik
name: Gadomski, Wojciech
name: Mazej, Zoran
name: Ruani, Giampiero
name: Bergenti, Ilaria
name: Jaroń, Tomasz
name: Ozarowski, Andrew
name: Hill, Stephen
name: Leszczyński, Piotr J.
name: Tokár, Kamil
name: Derzsi, Mariana
name: Barone, Paolo
name: Wohlfeld, Krzysztof
name: Lorenzana, José
name: Grochala, Wojciech
Publisher: name: arXiv
Year: 2018
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Materials Science (cond-mat.mtrl-sci)
subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: The parent compound of high-Tc superconducting cuprates is a unique Mott state consisting of layers of spin-1/2 ions arranged on a square lattice and with a record high antiferromagnetic coupling within the layers. Compounds with similar characteristics have long been searched for. Nickelates and iridates had been proposed as cuprate analogs but so far have not reached a satisfactory similarity. Here we use a combination of experimental and theoretical tools to show that the commercial compound AgF2 is an excellent cuprate analog with remarkably similar electronic parameters to La2CuO4 but larger buckling of planes. Two-magnon Raman scattering reveals a superexchange constant which reaches 70% of that of a typical cuprate. We argue that structures that reduce or eliminate the buckling of the AgF2 planes could have an antiferromagnetic coupling that matches or surpasses the cuprates.
description: 15 pages, 3 figures plus Supplementary Information in ancillary folder
Decoherence on Quantum Tunneling in the Multi-Dimensional Wave Function Approach
Creators: name: Tanaka, Takahiro
Publisher: name: arXiv
Year: 1994
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We consider fundamental problems on the understanding of the tunneling phenomena in the context of the multi-dimensional wave function. In this paper, we reconsider the quantum state after tunneling and extend our previous formalism to the case when the quantum state before tunneling is in a squeezed state. Through considering this problem, we reveal that the quantum decoherence plays a crucial role to allow us of the concise description of the quantum state after tunneling.
description: 27 pages revtex file, uuencoded postscript figure file is avilable from tanaka@murasaki.scphys.kyoto-u.ac.jp upon request, KUNS1295
Emergent Coherent Lattice Behavior in Kondo Nanosystems
Creators: name: Raczkowski, Marcin
name: Assaad, Fakher F.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: How many magnetic moments periodically arranged on a metallic surface are needed to generate a coherent Kondo lattice behavior? We investigate this fundamental issue within the particle-hole symmetric Kondo lattice model using quantum Monte Carlo simulations. Extra magnetic atoms forming closed shells around the initial impurity induce a fast splitting of the Kondo resonance at the inner shells which signals the formation of composite heavy-fermion bands. The onset of the hybridization gap matches well the enhancement of antiferromagnetic spin correlations in the plane perpendicular to the applied magnetic field, a genuine feature of the coherent Kondo lattice. In contrast, the outermost shell remains dominated by a local Kondo physics with spectral features resembling the single-impurity behavior.
description: 4+ pages plus supplemental material; published version
A Practical Method for Relativistic 3N-Scattering Calculations with Realistic Potentials
Creators: name: Kamada, H.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: Using a scale transformation in momentum space a phase equivalent relativistic potential is generated from the nonrelativistic potential. By that transformation a practical method for the relativistic 3N scattering with realistic nucleon-nucleon potentials is introduced. The formalism can be applied to any realistic nonrelativistic potential. We also discuss the locations of the moving logarithmic singularities of the free relativistic three-body Green's function. It enters in the relativistic 3N Faddeev equations, which have been formulated long time ago for a 3-boson bound state and which we propose to also use for 3N scattering. Finally we compare relativistic deuteron wave functions to nonrelativistic ones.
description: 6 pages, 3 figures
Association of 20P11.2 Deletion With Growth Hormone Deficiency and Hypothyroidism
Creators: name: Mohammed, Idris Omer
Publisher: name: Manara - Qatar Research Repository
Year: 2025
Subjects: classificationCode: 42
subject: Health sciences
subject: FOS: Health sciences

description: There are few reports describing proximal deletions of the short arm of chromosome 20 (20p), making it difficult to predict the likely consequences of this deletion. Previously, two reports have described a mosaic maternally inherited 20p deletion; the first case has described a proximal 20p11.2 deletion mainly associated with phenotypes such as panhypopituitarism and dysmorphic facial features. The second case has reported Alagille syndrome with a submicroscopic 20p deletion (including the JAG1 gene).Another report describing a de novo 20p11.22-p11.23 haploinsufficiency, have described a phenotype of autism, craniofacial dysmorphism, and Hirschsprung disease. Herein, we report the smallest reported de novo proximal 20p deletion in 9-years old boy with a phenotype including; growth hormone deficiency, hypothyroidism, craniofacial dysmorphism, ocular abnormalities, ectopic inguinal testes, polysplenia, gastrointestinal system anomalies and immune system impairment. The only other similar report to our patient involving the deletion of only Foxa2 gene showed phenotypes associated with biliary atresia, malrotation and interrupted inferior vena cava. Our patient provides further evidence expanding the spectrum of 20p11.2 deletion to include hypothyroidism and growth hormone deficiency.
Quantum Complex Scalar Field in the Two-Dimensional Spacetime with Closed Timelike Curves and a Time-Machine Problem
Creators: name: Sushkov, Sergey
Publisher: name: arXiv
Year: 1994
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: It is considered the quantum complex scalar field which obeys the authomorphic condition in the two-dimensional spacetime with closed timelike curves and the chronology horizon. The renormalized stress-energy tensor is obtained. It is shown that the value of the stress-energy tensor is regular at the chronology horizon for specific authomorphic parameters. Thus the particular example of field configuration is given for which the Hawking's chronology protection conjecture is violated.
description: 21(Latex)Postscript file of the figure may be received from author, CQG-94-1006
Nuclear Matter on a Lattice
Creators: name: Muller, H. -M.
name: Koonin, S. E.
name: Seki, R.
name: van Kolck, U.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We investigate nuclear matter on a cubic lattice. An exact thermal formalism is applied to nucleons with a Hamiltonian that accommodates on-site and next-neighbor parts of the central, spin- and isospin-exchange interactions. We describe the nuclear matter Monte Carlo methods which contain elements from shell model Monte Carlo methods and from numerical simulations of the Hubbard model. We show that energy and basic saturation properties of nuclear matter can be reproduced. Evidence of a first-order phase transition from an uncorrelated Fermi gas to a clustered system is observed by computing mechanical and thermodynamical quantities such as compressibility, heat capacity, entropy and grand potential. We compare symmetry energy and first sound velocities with literature and find reasonable agreement.
description: 23 pages, 8 figures (some in color), to be submitted to Phys. Rev. C
MOESM1 of Metabolomic profiling implicates adiponectin as mediator of a favorable lipoprotein profile associated with NT-proBNP
Creators: name: Masuch, Annette
name: Pietzner, Maik
name: Bahls, Martin
name: Budde, Kathrin
name: KastenmĂźller, Gabi
name: Zylla, Stephanie
name: Artati, Anna
name: Adamski, Jerzy
name: VĂślzke, Henry
name: DĂśrr, Marcus
name: Felix, Stephan
name: Nauck, Matthias
name: Friedrich, Nele
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Marine Biology

description: Additional file 1. Detailed methods description and supporting results. Population characteristics for the replication population SHIP-2 and the results for the in-depth analysis of the lipoprotein profile are presented. Furthermore, the results of the sensitivity analysis on the influence of lipid lowering drugs on the lipoprotein profile is given.
Additional file 1 of Effect of perioperative probiotic supplements on the short-term clinical outcomes of patients undergoing laparoscopic or robotic radical gastrectomy after neoadjuvant chemotherapy: Study protocol for a multicenter randomized controlled trial (GISSG2023 - 01 Study)
Creators: name: Liu, Gan
name: Cao, Shougen
name: Liu, Xiaodong
name: Tian, Yulong
name: Yu, Wenbin
name: Chai, Jie
name: Li, Leping
name: Wang, Xixun
name: Chu, Xianqun
name: Duan, Quanhong
name: Qu, Jianjun
name: Wang, Hao
name: Zhang, Huanhu
name: Wang, Xinjian
name: Hui, Xizeng
name: Yang, Daogui
name: Zhou, Shaofei
name: Ding, Yinlu
name: Wang, Hongbo
name: Zhou, Fengqiang
name: Hu, Baoguang
name: Guo, Peiming
name: Jiang, Lixin
name: Zhang, Guangyong
name: Pan, Qiang
name: Zhou, Xiaobin
name: Zhou, Yanbing
Publisher: name: figshare
Year: 2025
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences

description: Supplementary Material 1.
Constructions of genuinely entangled multipartite states with applications to local hidden variables (LHV) and states (LHS) models
Creators: name: Augusiak, R.
name: Demianowicz, M.
name: Tura, J.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Building upon the results of [R. Augusiak et al., Phys. Rev. Lett. 115, 030404 (2015)] we develop a general approach to the generation of genuinely entangled multipartite states of any number of parties from genuinely entangled states of a fixed number of parties, in particular, the bipartite entangled ones. In our approach, certain isometries whose output subspaces are either symmetric or genuinely entangled in some multipartite Hilbert spaces are applied to local subsystems of bipartite entangled or multipartite genuinely entangled quantum states. To prove that entanglement of the resulting states is indeed genuine we then introduce novel criteria allowing to decide it efficiently. The construction is then exploited to provide examples of multipartite states that are genuinely entangled but not genuinely nonlocal, giving further illustration for the inequivalence between entanglement and nonlocality in the multiparticle scenario. It is also shown how to construct genuinely entangled states which are unsteerable across certain bipartite cuts.
description: 24 pages, no figures
title: Using $k$-way Co-occurrences for Learning Word Embeddings
Creators: name: Bollegala, Danushka
name: Yoshida, Yuichi
name: Kawarabayashi, Ken-ichi
Publisher: name: American Association for Artificial Intelligence (AAAI) Press
Year: 2017

description: Co-occurrences between two words provide useful insights into the semantics of those words. Consequently, numerous prior work on word embedding learning have used co-occurrences between two words as the training signal for learning word embeddings. However, in natural language texts it is common for multiple words to be related and co-occurring in the same context. We extend the notion of co-occurrences to cover $k(\geq\!\!2)$-way co-occurrences among a set of $k$-words. Specifically, we prove a theoretical relationship between the joint probability of $k(\geq\!\!2)$ words, and the sum of $\ell_2$ norms of their embeddings. Next, we propose a learning objective motivated by our theoretical result that utilises $k$-way co-occurrences for learning word embeddings. Our experimental results show that the derived theoretical relationship does indeed hold empirically, and despite data sparsity, for some smaller $k$ values, $k$-way embeddings perform comparably or better than $2$-way embeddings in a range of tasks.
Charge exchange in relativistic heavy ion collisions
Creators: name: Bertulani, C. A.
name: Dolci, D. S.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: Elastic charge-exchange in relativistic heavy ion collisions is responsible for the non-disruptive change of the charge state of the nuclei. We show that it can be reliably calculated within the eikonal approximation for the reaction part. The formalism is applied to the charge-pickup cross sections of 158 GeV/nucleon Pb projectiles on several targets. The relative contributions of pion- and rho-exchange are determined, using a single-particle model for the internal structure of the nuclei. The calculated cross sections are non-negligible for heavy targets. It is shown that these cross sections can be useful to obtain information on the Gamow-Teller transition strengths of the nuclei.
description: 12 pages, 4 postscript figures
Evidence for Super-Alfvenic oscillations in sources of Solar type III radio bursts
Creators: name: Mohan, Atul
name: Mondal, Surajit
name: Oberoi, Divya
name: Lonsdale, Colin
Publisher: name: arXiv
Year: 2018
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: At the site of their origin, solar meterwave radio bursts contain pristine information about the local coronal magnetic field and plasma parameters. On its way through the turbulent corona, this radiation gets substantially modified due to the propagation effects. Effectively disentangling the intrinsic variations in emission from propagation effects has remained a challenge. We demonstrate a way to achieve this, using snapshot spectroscopic imaging study of weak type III bursts using data from the Murchison Widefield Array (MWA). We use this study to present the first observational evidence for second-scale Quasi-Periodic Oscillations (QPOs) in burst source sizes and orientation with simultaneous QPOs in intensity. The observed oscillations in source sizes are so fast and so large that, they would require two orders of magnitude larger Alfven speed than the typical 0.5 Mm/s, if interpreted within a MHD framework. These observations imply the presence of a quasi-periodic regulation mechanism operating at the particle injection site, modulating the geometry of energetic electron beams that generate type III bursts. In addition, we introduce a method to characterize plasma turbulence in mid coronal ranges, using such frequent weak bursts. We also detect evidence for a systematic drift in the location of the burst sources superposed on the random jitter induced by scattering. We interpret this as the motion of the open flux tube within which the energetic electron beams travel.
Additional file 1 of Mental health professionals view about the impact of male gender for the treatment of men with depression - a qualitative study
Creators: name: Stiawa, Maja
name: Müller-Stierlin, Annabel
name: Staiger, Tobias
name: Kilian, Reinhold
name: Becker, Thomas
name: Gündel, Harald
name: Beschoner, Petra
name: Grinschgl, Achim
name: Frasch, Karel
name: Schmauß, Max
name: Panzirsch, Maria
name: Mayer, Lea
name: Sittenberger, Elisa
name: Krumm, Silvia
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Science Policy
subject: Mental Health

description: Additional file 1: Figure 1. Interview guide