cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1: of Altered DNA methylation is associated with aberrant gene expression in parenchymal but not airway fibroblasts isolated from individuals with COPD
Creators: name: Clifford, Rachel
name: Fishbane, Nick
name: Patel, Jamie
name: MacIsaac, Julia
name: McEwen, Lisa
name: Fisher, Andrew
name: Corry-Anke Brandsma
name: Nair, Parameswaran
name: Kobor, Michael
name: Tillie-Louise Hackett
name: Knox, Alan
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Table S1. (.MWD): DNA regions differentially methylated with COPD status in airway fibroblasts. Summary of the 35 gene annotated regions containing a minimum of three CpG probes and a maximum difference in DNA methylation of at least 20% (difference in beta value of 0.2). A positive delta beta identifies decreased DNA methylation in cells isolated from individuals with COPD, while a negative value identifies increased DNA methylation in cells isolated from individuals with COPD. (DOCX 18Â kb)
Doctoral thesis recital (collaborative piano)
Creators: name: Tang, Mengni
Publisher: name: The University of Texas at Austin
Year: 2019
Subjects: Sonatas (Basson and piano)
Sonatas (Violin and piano)
Violin and piano music.
Sonatas (Clarinet and piano), Arranged

description: [Sonata for bassoon and piano in G minor, op. 168 / Camille Saint-Saëns -- Sonata for violin and piano / Claude Debussy -- Sonata in D major, op. 94 / Sergey Prokofiev ; arranged for clarinet and piano -- Unidentified composition for violin and piano]
Microbubbles and their application to ozonation in water treatment: A critical review exploring their benefit and future application
Creators: name: John, Alexander
name: Brookes, Adam
name: Carra, Irene
name: Jefferson, Bruce
name: Jarvis, Peter
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Biophysics
subject: Space Science
subject: Medicine
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Marine Biology

description: Ozonation is a widely applied water treatment process, used for oxidation of contaminants, as well as for the disinfection of water. However, the conventional ozonation process demands a high energy requirement and deep tanks to ensure effective mass transfer and oxidation. Microbubble technologies have emerged which have the potential to improve gas-liquid contacting. Microbubbles have diameters of 1–100 µm, while conventional bubbles used in ozonation are between 2 and 6 mm. Microbubbles have many favorable characteristics that make them suitable for ozonation. In this review, the attributes of microbubbles for ozonation have been compared with those of conventional bubbles. The higher interfacial area and lower rise velocity of microbubbles compared with conventional bubbles means that ozone in the gas phase can be more efficiently transferred into the liquid phase. This is due to a higher contact time and increased contact area of the bubble with the bulk liquid. The analysis reveals that the volumetric mass transfer coefficient can be significantly enhanced through the use of microbubbles. In addition, the steady state dissolved ozone concentration was positively impacted by the use of microbubbles. Microbubbles were shown to be able to oxidize a broader range of organic compounds more quickly than for conventional bubbles. However, the review highlighted that comparison of microbubbles with conventional bubbles is not always carried out in a fair and consistent way with respect to reactor configuration. Requirements for future research, more consistent experimental comparisons and the steps needed to enable implementation of microbubbles have been discussed. HighlightsExtensive comparison of microbubbles with conventional bubbles for ozonation.Ozone mass transfer enhanced through the use of microbubbles.Improved micropollutant removal when using microbubble ozonation.Opportunities for more efficient ozone reactor design using microbubbles. Extensive comparison of microbubbles with conventional bubbles for ozonation. Ozone mass transfer enhanced through the use of microbubbles. Improved micropollutant removal when using microbubble ozonation. Opportunities for more efficient ozone reactor design using microbubbles.
Renormalization group decoder for a four-dimensional toric code
Creators: name: Duivenvoorden, Kasper
name: Breuckmann, Nikolas P.
name: Terhal, Barbara M.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We describe a computationally-efficient heuristic algorithm based on a renormalization-group procedure which aims at solving the problem of finding minimal surface given its boundary (curve) in any hypercubic lattice of dimension $D>2$. We use this algorithm to correct errors occurring in a four-dimensional variant of the toric code, having open as opposed to periodic boundaries. For a phenomenological error model which includes measurement errors we use a five-dimensional version of our algorithm, achieving a threshold of $4.35\pm0.1\%$. For this error model, this is the highest known threshold of any topological code. Without measurement errors, a four-dimensional version of our algorithm can be used and we find a threshold of $7.3\pm0.1\%$. For the gate-based depolarizing error model we find a threshold of $0.31\pm0.01\%$ which is below the threshold found for the two-dimensional toric code.
description: 18 pages, 12 figures, 3 tables. Comments are welcome
title: The Parrot And The Myna Birds: A song improvised in the "A-li-li" style. Consultant: M17.
title: 红嘴绿鹦哥与八哥鸟群（“阿里里”调）
titleType: AlternativeTitle
title: Le Perroquet et les Mainates: chanson improvisée dans le style "A-li-li"
titleType: AlternativeTitle
Creators: name: Michaud, Alexis
name: 米可
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2013
Subjects: subject: Naxi
subject: nxq

description: This is a song improvised in the GuQi style. There exists a full transcription+annotation+translation. A similar song in the "GuQi" style was recorded earlier on the same day. The recording session was arranged at the instigation of Pr. He Xueguang. Mr. He Xuemin (M17) was hosted full-time at the Naxi Culture Education Centre that he had founded at his own home: a small-scale training centre plus museum. This 纳西文化传习中心 later became an Association: 纳西文化传习协会. At the Education Centre, Mr. He Xuemin took part in training sessions; he also composed texts in Romanized Naxi, read and annotated books in Romanized Naxi published in the 1980s, and read publications in Chinese about Naxi culture. Mr. He Xuemin, a connoisseur of Naxi arts, readily accepted to record some songs, with two friends of his. The recording took place at the home of one of his friends, in a room that had little reverberation thanks to an abundance of rugs and bedding linen. The transcription of M17's documents is less reliable than that of M3 and M4's, because both the investigator and the language consultant were novice. Mr. He Xuemin's native dialect, Huangshan, is close to that of A-Ser (the mother tongue of M3 and M4), but not fully identical. As most of my work in 2002 concerned the A-Ser dialect, I was not able to undertake a study of the Huangshan dialect; I have not recorded other data from this dialect since.
description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
The Detectability of Radio Auroral Emission from Proxima B
Creators: name: Burkhart, Blakesley
name: Loeb, Abraham
Publisher: name: arXiv
Year: 2017
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: Magnetically active stars possess stellar winds whose interaction with planetary magnetic fields produces radio auroral emission. We examine the detectability of radio auroral emission from Proxima b, the closest known exosolar planet orbiting our nearest neighboring star, Proxima Centauri. Using the Radiometric Bode's Law, we estimate the radio flux produced by the interaction of Proxima Centauri's stellar wind and Proxima b's magnetosphere for different planetary magnetic field strengths. For plausible planetary masses, Proxima b produces 6-83 mJy of auroral radio flux at frequencies of 0.3-0.8 MHz for planetary magnetic field strengths of 1-3 B$_{\oplus}$. According to recent MHD models that vary the orbital parameters of the system, this emission is expected to be highly variable. This variability is due to large fluctuations in the size of Proxima b's magnetosphere as it crosses the equatorial streamer regions of the dense stellar wind and high dynamic pressure. Using the MHD model of Garraffo et al. 2016 for the variation of the magnetosphere radius during the orbit, we estimate that the observed radio flux can vary nearly by an order of magnitude over the 11.2 day period of Proxima b. The detailed amplitude variation depends on the stellar wind, orbital, and planetary magnetic field parameters. We discuss observing strategies for proposed future space-based observatories to reach frequencies below the ionospheric cut off ($\sim 10$ MHz) as would be required to detect the signal we investigate.
description: Submitted to ApJL, comments welcome
title: Explanation about the song "The Parrot And The Myna Birds", a song improvised in the "Gu-Qi" and "A-li-li" styles. Consultant: M17.
title: 关于“红嘴绿鹦哥与八哥鸟群”这首歌（“阿里里”调与“骨气”调）
titleType: AlternativeTitle
title: Explication de la chanson "Le Perroquet et les Mainates", chanson improvisée dans les style "Gu-Qi" et "A-li-li". Consultant: M17.
titleType: AlternativeTitle
Creators: name: Michaud, Alexis
name: 米可
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2013
Subjects: subject: Naxi
subject: nxq

description: This is an explanation about the song "The Parrot And The Myna Birds". The explanation was provided after the song was improvised in the "Gu-Qi" and "A-li-li" styles. There exists a full transcription+annotation+translation of this document. (Both songs are also available with annotations+translation.) The recording session was arranged at the instigation of Pr. He Xueguang. Mr. He Xuemin (M17) was hosted full-time at the Naxi Culture Education Centre that he had founded at his own home: a small-scale training centre plus museum. This 纳西文化传习中心 later became an Association: 纳西文化传习协会. At the Education Centre, Mr. He Xuemin took part in training sessions; he also composed texts in Romanized Naxi, read and annotated books in Romanized Naxi published in the 1980s, and read publications in Chinese about Naxi culture. Mr. He Xuemin, a connoisseur of Naxi arts, readily accepted to record some songs, with two friends of his. The recording took place at the home of one of his friends, in a room that had little reverberation thanks to an abundance of rugs and bedding linen. The transcription of M17's documents is less reliable than that of M3 and M4's, because both the investigator and the language consultant were novice. Mr. He Xuemin's native dialect, Huangshan, is close to that of A-Ser (the mother tongue of M3 and M4), but not fully identical. As most of my work in 2002 concerned the A-Ser dialect, I was not able to undertake a study of the Huangshan dialect; I have not recorded other data from this dialect since.
description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
Multiple crossovers and coherent states in a Mott-Peierls insulator
Creators: name: Nájera, O.
name: Civelli, M.
name: Dobrosavljević, V.
name: Rozenberg, M. J.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We consider the dimer Hubbard model within Dynamical Mean Field Theory to study the interplay and competition between Mott and Peierls physics. We describe the various metal-insulator transition lines of the phase diagram and the break down of the different solutions that occur along them. We focus on the specific issue of the debated Mott-Peierls insulator crossover and describe the systematic evolution of the electronic structure across the phase diagram. We found that at low intra-dimer hopping the emerging local magnetic moments can unbind above a characteristic singlet temperature $T^*$. Upon increasing the inter-dimer hopping subtle changes occur in the electronic structure. Notably, we find Hubbard bands of a mix character with coherent and incoherent excitations. We argue that this state is relevant for VO$_2$ and its signatures may be observed in spectroscopic studies, and possibly through pump-probe experiments.
description: 17 pages, 17 figures
The Eleven - Jesus appeared risen to the Officers of the Temple Prison
Creators: name: van der Hoeven, Adrie
Publisher: name: figshare
Year: 2022
Subjects: subject: 220401 Christian Studies (incl. Biblical Studies and Church History)
subject: FOS: Philosophy, ethics and religion
subject: 220404 Jewish Studies
subject: Religious Studies

description: The thesis of this article is that the term “the Eleven” used by the Greek Luke both in his Easter appearance Gospel and in his Acts of the Apostles doesn’t designate the twelve Galilean apostles minus the dead Judas Iscariot, but the officers of the temple prison of Jerusalem. These officers, with their servants who are called ‘hyperetai’ by Luke, were also responsible for the corporal punishments and the death penalty. This vocabulary and these responsibilities are an exact parallel of the organisation of the prison in Athens, as described in the book “Athenaion Politeia” attributed to Aristotle, and as described by Heraclides, not earlier than the second century BCE. It will be shown that this one simple thesis about “the Eleven” accounts for many, hitherto seemingly contradictive or inexplicable elements of the narratives in Gospels and Acts, especially of the Easter narratives, which now can be regarded as completely historical, as they are not reciprocally contradictive any longer in any detail. The thesis implies that Jesus both appeared risen to his Galilean apostles in the room of the Last Supper and to his prison guards in the temple and that these two groups of witnesses of his (death and) resurrection became one group of apostles on Pentecost, for then Simon Peter stood and preached “with the Eleven”. The Galilean apostles nevertheless remained distinct from all others, as “the Twelve” who had the doctrinal and administrative authority.
title: 01_0842
Creators: name: Wesley Baldwin, John
name: Baldwin, John W.
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2018
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: L'ensemble de ces notes ont été crée par John Baldwin lors d'une de ses premières périodes de résidence à Paris. Ces documents comprennent tous les magistri qu’il avait pu rencontrer dans ses sources. Aux XIIème et XIIIème siècles, les universités n'existant pas encore, le titre de magister s'il évoque certainement une compétence n'est pas rattaché de façon systématique au passage par les écoles. De surcroît, les magistris sont le plus souvent désignés par leur seul prénom. La lecture de ces données est donc difficile et suppose un long travail pour tenter d'identifier un individu auquel on pourrait rattacher plusieurs mentions. John Baldwin avait donc renoncé à utiliser ces données pour donner un prolongement à sa magnifique étude sur les gradués d'université et leur emploi par les Capétiens et les Plantagenêts. Néanmoins, il a conservé ces données et elles sont potentiellement très utile dans le cadre de Studium, comme le sont toutes les mentions dans les volumes des Fasti Ecclesiae Gallicanae de chanoines portant ce titre de magister sans autres précisions. L'ampleur des dépouillements rend ces données très utiles et nous devons une grande reconnaissance à John Baldwin pour avoir pris la peine de faire photocopier ses fiches et de nous les avoir transmises amicalement.
Les données ainsi que les images des fiches sont accessibles sur le site Internet à l'adresse suivante : http://studium-baldwin.lamop.fr/.
Les transcriptions des fiches ont été effectuées par des étudiants de Paris 1 Panthéon - Sorbonne mais elles n'ont pas été corrigées par la suite.
description: Relation: https://lamop.hypotheses.org/
Additional file 5: of Digital storytelling as a method in health research: a systematic review protocol
Creators: name: Rieger, Kendra
name: West, Christina
name: Kenny, Amanda
name: Rishma Chooniedass
name: Demczuk, Lisa
name: Mitchell, Kim
name: Chateau, Joanne
name: Scott, Shannon
Publisher: name: figshare
Year: 2018
Subjects: Medicine
Developmental Biology
Science Policy
Computational Biology

description: Quality Appraisal Instrument for Qualitative Studies. (DOCX 258 kb)
Inductive-detection electron-spin resonance spectroscopy with $\mathbf{65}\,$spins$/\sqrt{\text{Hz}}$ sensitivity
Creators: name: Probst, S.
name: Bienfait, A.
name: Campagne-Ibarcq, P.
name: Pla, J. J.
name: Albanese, B.
name: Barbosa, J. F. Da Silva
name: Schenkel, T.
name: Vion, D.
name: Esteve, D.
name: Mølmer, K.
name: Morton, J. J. L.
name: Heeres, R.
name: Bertet, P.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Physics (quant-ph)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We report electron spin resonance spectroscopy measurements performed at millikelvin temperatures in a custom-built spectrometer comprising a superconducting micro-resonator at $7$ GHz and a Josephson parametric amplifier. Owing to the small ${\sim}10^{-12}λ^3$ magnetic resonator mode volume and to the low noise of the parametric amplifier, the spectrometer sensitivity reaches $260\pm40$ spins$/$echo and $65\pm10$ $\mathrm{spins}/\sqrt{\text{Hz}}$, respectively.
description: 6 pages, 4 figures
title: The Parrot And The Myna Birds: A song improvised in the "Guqi" style. Consultant: M17.
title: 红嘴绿鹦哥与八哥鸟群（“骨气”调）
titleType: AlternativeTitle
title: Le Perroquet et les Mainates: chanson improvisée dans le style "Guqi"
titleType: AlternativeTitle
Creators: name: Michaud, Alexis
name: 米可
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2013
Subjects: subject: Naxi
subject: nxq

description: This is a song improvised in the GuQi style. There exists a full transcription+annotation+translation. A similar song in the "Alili" style was recorded later on the same day. The recording session was arranged at the instigation of Pr. He Xueguang. Mr. He Xuemin (M17) was hosted full-time at the Naxi Culture Education Centre that he had founded at his own home: a small-scale training centre plus museum. This 纳西文化传习中心 later became an Association: 纳西文化传习协会. At the Education Centre, Mr. He Xuemin took part in training sessions; he also composed texts in Romanized Naxi, read and annotated books in Romanized Naxi published in the 1980s, and read publications in Chinese about Naxi culture. Mr. He Xuemin, a connoisseur of Naxi arts, readily accepted to record some songs, with two friends of his. The recording took place at the home of one of his friends, in a room that had little reverberation thanks to an abundance of rugs and bedding linen. The transcription of M17's documents is less reliable than that of M3 and M4's, because both the investigator and the language consultant were novice. Mr. He Xuemin's native dialect, Huangshan, is close to that of A-Ser (the mother tongue of M3 and M4), but not fully identical. As most of my work in 2002 concerned the A-Ser dialect, I was not able to undertake a study of the Huangshan dialect; I have not recorded other data from this dialect since.
description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
S. Bachittar Singh
Creators: name: Project Team, Their Finest Hour
Publisher: name: University of Oxford
Year: 2024
Subjects: classificationCode: 430304
subject: British history
classificationCode: 430308
subject: European history (excl. British, classical Greek and Roman)
classificationCode: 430316
subject: International history

description: Sardar Bahadur Jemadar Bachittar Singh was part of the Sikh Pioneers, an infantry regiment of the British Indian Army. He participated in both the First and Second World Wars.
Origin–destination (OD) of the interprovincial floating population of China
Creators: name: Ai, Tinghua
name: Zhou, Mengjie
name: Tian, Jing
name: Ye, Ning
Publisher: name: Taylor & Francis
Year: 2016
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy
subject: Computational Biology

description: China’s large floating population catalyzes economic development, redistributes the population, and promotes social changes to the social structure, lifestyle patterns, and cultural values. The floating population is a unique group faced with numerous problems stemming from cultural and lifestyle differences. Understanding and visualizing the distributional characteristics and patterns of the floating population is crucial for developing effective social policies. In this study, the origin–destination (OD) map and its adjustment destination–origin (DO) map are used to represent the interprovincial floating population. The OD or DO map can be regarded as a two-level spatial treemap representing the floating population recorded by pairs of locations. In accordance with the different hierarchy of the two-level spatial treemap, the OD and DO are distinguished. The migration volume of the floating population data is represented by the OD and DO maps to find the population’s direction of movement, magnitude, and hot-spots. The migration indicators including migration effectiveness, migration preference indexes, and sex ratios are represented by the OD and DO maps, which assist in to reviewing and studying the deep patterns of floating population.
Developing tools that assist with design support approaches to promote cropping system diversification
Creators: name: Cadoux, Stéphane
name: Sauzet, Gilles
Publisher: name: Zenodo
Year: 2022
Subjects: DiverIMPACTSPA
Learning
Barriers and enablers
Assessment
Multiple cropping
Intercropping
Rotation
Field

description: Problem The design of diversified cropping systems for the agroecological transition requires operational tools, adapted to local pedo-climatic conditions, to support the decision-making of farmers or advisors (Le Gal et al. 2011, Duru et al. 2015). Solution A prototype of a dashboard has been developed that can help farmers to design and evaluate innovations. The dashboard, co-developed with Case Study 14 (dealing with the diversification of arable cropping systems) addresses concrete agronomic problems, for instance how to lower rapeseed susceptibility to pest damage. Farmers/advisors can either use directly this ‘robust rapeseed dashbord’, or could construct their own.
Exploring Gender Differences in Graduation Proficiency in Mathematics Education Using a Markov Chain Model: Implications for Economic Growth in Nigeria
Creators: name: Iji, Clement
name: Abah, Joshua
Publisher: name: arXiv
Year: 2017
Subjects: subject: History and Overview (math.HO)
subject: FOS: Mathematics

description: This study employs an ex-post facto research design to explore the fluctuations of gender difference in academic achievement among graduating students of mathematics education. Graduation statistics for a total of 1106 graduating students of mathematics education (923 males and 183 females) from a University in North Central Nigeria were used to design a discrete-time Markov chain model for the movement of the difference (d) in graduating proficiency from one range of values (states) to the other. Additional goodness of fit test ($χ$ 2 = 1.731, p = 0.99924) and t-test (t = 0.4055, p = 0.6852) unveiled that d has stayed much the same over the 12 graduation cycles used in the study, and that whatever factors determine the difference in academic achievement between male and female graduating students of mathematics education on a graduation cycle basis have remained much the same over the years. Further analysis of the model predicted the closure of the observed gender gap in the next 15 graduation cycles (p 15). The results of this study has specifically highlighted the fact that female graduates of mathematics education are as proficient as their male counterparts in driving value added services in and beyond the education sub-sector of the Nigerian economy. Based on the findings of this study, it was recommended that future work may consider an in-depth investigation of the sensitivity of parameters that may have influenced specific probabilities given in the model.
title: Only daughter (version 2)
title: Fille unique (version 2)
titleType: AlternativeTitle
Creators: name: Michaud, Alexis
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2014
Subjects: subject: Naxi
subject: nxq
subject: 纳西语

description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
Additional file 6: of IntLIM: integration using linear models of metabolomics and gene expression data
Creators: name: Siddiqui, Jalal
name: Baskin, Elizabeth
name: Mingrui Liu
name: Cantemir-Stone, Carmen
name: Bofei Zhang
name: Bonneville, Russell
name: McElroy, Joseph
name: Coombes, Kevin
name: MathĂŠ, Ewy
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Computational Biology

description: Figure S2. Preliminary analysis of filtered breast cancer data involving 108 samples (61 tumor and 47 non-tumor) with 379 metabolites and 18,228 genes. A, B) Distribution of normalized metabolite levels (Metabolon method) and RMA-normalized gene expression levels for all samples, respectively. C,D) Principal component analysis of metabolomics and gene expression data, respectively. In the IntLIM package Rshiny app, these plots are interactive and hovering over points will provide information on those points (e.g. sample names). (PDF 543Â kb)
Substantial drag reduction in turbulent flow using liquid-infused surfaces
Creators: name: Van Buren, Tyler
name: Smits, Alexander
Publisher: name: arXiv
Year: 2017
Subjects: subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences

description: Experiments are presented that demonstrate how liquid-infused surfaces can reduce turbulent drag significantly in Taylor-Couette flow. The test liquid was water, and the test surface was composed of square microscopic grooves measuring 100 $μ$m to 800 $μ$m, filled with alkane liquids with viscosities from 0.3 to 1.4 times that of water. We achieve drag reduction exceeding 35\%, four times higher than previously reported for liquid-infused surfaces in turbulent flow. The level of drag reduction increased with viscosity ratio, groove width, fluid area fraction, and Reynolds number. The optimum groove width was given by $w^+ \approx 35$.
description: Currently under consideration at Journal of Fluid Mechanics
The Influence of Family on Gambling Behaviors: A Scoping Review
Creators: name: Dymond, Simon
name: Wright, Simon
name: Dighton, Glen
name: Torrance, Jamie
name: Smith, Jessica
Publisher: name: OSF Registries
Year: 2024
Subjects: subject: Medicine and Health Sciences
subject: Social and Behavioral Sciences

description: This scoping review seeks to evaluate and consolidate the influence of family on gambling behaviors research. This is in response to the increasing prevalence of gambling among the veteran population and the growing evidence that link's the family to gambling behaviors in veterans. It will seek to comprehend the protective and risk variables associated with the family.
title: Climate Change Litigation: What the ECtHR Could Learn from Courts in the Global South
Creators: name: Zimmermann, Nesa
name: Murcott, Melanie
name: Tigre, Maria Antonia
Publisher: name: Fachinformationsdienst für internationale und interdisziplinäre Rechtsforschung
Year: 2022
Subjects: subject: 341

description: Völkerrechtsblog
Entanglement spectroscopy on a quantum computer
Creators: name: Johri, Sonika
name: Steiger, Damian S.
name: Troyer, Matthias
Publisher: name: arXiv
Year: 2017
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We present a quantum algorithm to compute the entanglement spectrum of arbitrary quantum states. The interesting universal part of the entanglement spectrum is typically contained in the largest eigenvalues of the density matrix which can be obtained from the lower Renyi entropies through the Newton-Girard method. Obtaining the $p$ largest eigenvalues ($λ_1>λ_2\ldots>λ_p$) requires a parallel circuit depth of $\mathcal{O}(p(λ_1/λ_p)^p)$ and $\mathcal{O}(p\log(N))$ qubits where up to $p$ copies of the quantum state defined on a Hilbert space of size $N$ are needed as the input. We validate this procedure for the entanglement spectrum of the topologically-ordered Laughlin wave function corresponding to the quantum Hall state at filling factor $ν=1/3$. Our scaling analysis exposes the tradeoffs between time and number of qubits for obtaining the entanglement spectrum in the thermodynamic limit using finite-size digital quantum computers. We also illustrate the utility of the second Renyi entropy in predicting a topological phase transition and in extracting the localization length in a many-body localized system.
title: Trickster: six stories of /ə˧ʝi˩ɳɖə˞˧/ the Trickster
title: Six histoires du filou /ə˧ʝi˩ɳɖə˞˧/
titleType: AlternativeTitle
Creators: name: Michaud, Alexis
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2014
Subjects: subject: Naxi
subject: nxq
subject: 纳西语

description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
Shift of Shapiro Step in High-Temperature Superconductor
Creators: name: Kulikov, Kirill
name: Shukrinov, Yury
name: Nashaat, Majed
name: Irie, Akinobu
Publisher: name: arXiv
Year: 2017
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: Influence of the charge imbalance effect on the system of intrinsic Josephson junctions of high temperature superconductors under external electromagnetic radiation are investigated. We demonstrate that the charge imbalance is responsible for a slope in the Shapiro step in the IV-characteristic. The nonperiodic boundary conditions shift the Shapiro step from the canonical position which determined by a frequency of external radiation. We also demonstrate how the system parameters affect on the shift of Shapiro step.
description: arXiv admin note: text overlap with arXiv:1601.04456
Dynamically encircling exceptional points: Exact evolution and polarization state conversion
Creators: name: Hassan, Absar U.
name: Zhen, Bo
name: Soljacic, Marin
name: Khajavikhan, Mercedeh
name: Christodoulides, Demetrios N.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: We show that a two-level non-Hermitian Hamiltonian with constant off-diagonal exchange elements can be analyzed exactly when the underlying exceptional point is perfectly encircled in the complex plane. The state evolution of this system is explicitly obtained in terms of an ensuing transfer matrix, even for large encirclements, regardless of adiabatic conditions. Our results clearly explain the direction-dependent nature of this process and why in the adiabatic limit its outcome is dominated by a specific eigenstate irrespective of initial conditions. Moreover, numerical simulations suggest that this mechanism can still persist in the presence of nonlinear effects. We further show that this robust process can be harnessed to realize an optical omni-polarizer: a configuration that generates a desired polarization output regardless of the input polarization state, while from the opposite direction it always produces the counterpart eigenstate.
description: 6 pages, 4 figures
Additional file 2: of Morbidity from in-hospital complications is greater than treatment failure in patients with Staphylococcus aureus bacteraemia
Creators: name: Holmes, Natasha
name: J. Owen Robinson
name: Hal, Sebastiaan Van
name: Munckhof, Wendy
name: Athan, Eugene
name: Korman, Tony
name: Cheng, Allen
name: Turnidge, John
name: Johnson, Paul
name: Howden, Benjamin
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Table S1. Clinical characteristics and risk factors for S. aureus acquisition in cohort. (DOC 49 kb)
title: Ciending read vocabulary: reading of the first pages of a vocabulary list of Ciending Naxi by Xu Jirong, who is the author of the list and a native speaker
title: 香格里拉县次恩丁村纳西语的一些词汇
titleType: AlternativeTitle
Creators: name: Michaud, Alexis
name: 米可
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2014
Subjects: subject: Naxi
subject: nxq
subject: 纳西语

description: From 2009 to 2011, Xu Jirong, then a research student at Yunnan University, and Alexis Michaud had sustained exchanges about the phonological analysis of Ciending Naxi, Xu Jirong's native language. This resulted in a joint publication in 2012: Michaud, Alexis and Xu Jirong 徐继荣. Xiānggélǐlā xiàn Cìēndīng cūn nàxīyǔ yīnxì yánjiū 香格里拉县次恩丁村纳西语音系研究 [Research about the phonemic system of the Naxi dialect of Ciending village, Shangri-la prefecture]. Chama Gudao Yanjiu Jikan 茶马古道研究集刊 2. 139–165. The article contained a co-authored phonemic analysis, and a word list by Xu Jirong. On November 1st, 2013, Jirong agreed to record part of the vocabulary list (as Alexis was in Kunming on the way back from fieldwork). Some notations were corrected in the process. Due to time constraints (only one evening was available for this task), it was only possible to go through about one third of the list. This document provides phonetic evidence on this Naxi dialect, which presents some oppositions lost in some other dialects (see the article for details). Items are arranged roughly by alphabetical order: æ, b, ɕ, ç, d, ɖ... Many thanks to Mike Opper, a graduate student from Michigan University, in whose flat the recording was conducted, and who kindly provided mattresses and household linen to prop against the walls to decrease reverberation. Mike Opper and Meng Yang, a graduate from Ottawa University, were present during the recording.
description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
Inventaire transcription, atelier du campement
Creators: name: Anonyme
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2019

description: Liste et textes des transcriptions en version tapuscrite
description: Coverage: Clermont-Ferrand
Additional file 1: of Detection and interval cancer rates during the transition from screen-film to digital mammography in population-based screening
Creators: name: Sankatsing, Valérie
name: Fracheboud, Jacques
name: Munck, Linda De
name: Broeders, Mireille
name: Ravesteyn, Nicolien Van
name: Heijnsdijk, Eveline
name: Verbeek, André
name: Otten, Johannes
name: Pijnappel, Ruud
name: Siesling, Sabine
name: Koning, Harry De
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Performance indicators of screening for women aged 49–74 and 49–51 years. Age-adjusted performance indicators per calendar year for all, screen-film and digital mammography screens and age-adjusted results for the age group 49–51 years. (PDF 107 kb)
Internal structure and swelling behaviour of in silico microgel particles
Creators: name: Rovigatti, Lorenzo
name: Gnan, Nicoletta
name: Zaccarelli, Emanuela
Publisher: name: arXiv
Year: 2017
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: Microgels are soft colloids that, in virtue of their polymeric nature, can react to external stimuli such as temperature or pH by changing their size. The resulting swelling/deswelling transition can be exploited in fundamental research as well as for many diverse practical applications, ranging from art restoration to medicine. Such an extraordinary versatility stems from the complex internal structure of the individual microgels, each of which is a crosslinked polymer network. Here we employ a recently-introduced computational method to generate realistic microgel configurations and look at their structural properties, both in real and Fourier space, for several temperatures across the volume phase transition as a function of the crosslinker concentration and of the confining radius employed during the `in-silico' synthesis. We find that the chain-length distribution of the resulting networks can be analytically predicted by a simple theoretical argument. In addition, we find that our results are well-fitted to the fuzzy-sphere model, which correctly reproduces the density profile of the microgels under study.
title: Ahabala, song 1: A song in the traditional Na/Mosuo style 'Ahabala'
Creators: name: Michaud, Alexis
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2014
Subjects: subject: Yongning Na
subject: nru

description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
B1MG M2.4 Draft policy and access framework for discussion with internal and external stakeholders
Creators: name: Becker, Regina
name: Thorogood, Adrian
Publisher: name: Zenodo
Year: 2022
Subjects: B1MG
Beyond 1 Million Genomes
1+MG
1 Million Genomes Initiative
WP2
ELSI
Policy and access framework
Data Access

description: B1MG Project Milestone - M2.4 Draft policy and access framework for discussion with internal and external stakeholders
Analysis of COVID-19 Infection Chains in a School Setting: Data From a School-Based rRT-PCR–Gargle Pool Test System
Creators: name: Gruendl, Magdalena
name: Kheiroddin, Parastoo
name: Althammer, Michael
name: Schöberl, Patricia
name: Rohrmanstorfer, René
name: Wallerstorfer, Daniel
name: Ambrosch, Andreas
name: Kabesch, Michael
Publisher: name: Universität Regensburg
Year: 2023
Subjects: subject: COVID-19, SARS-CoV-2, school-testing, pool-PCR, gargle, children, rural, urban, implementation, evaluation, transmission
subject: 610 Medizin

description: Background:
School testing for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was implemented in some countries to monitor and prevent SARS-CoV-2 transmissions. Here, we analyze infection chains in primary schools and household members of infected students based on systematic real-time reverse-transcriptase polymerase-chain-reaction (rRT-PCR)–gargle pool testing.
Methods:
Students and school staff (N = 4300) of all 38 primary schools in the rural county of Cham, Germany, were tested twice per week with a gargle pool rRT-PCR system from April to July of 2021. Infection chains of all 8 positive cases identified by school testing were followed up.
Results:
In total, 8 positive cases were found by gargle pool PCR testing based on 96,764 school tests. While no transmissions occurred in the school setting, 20 of 27 household members of the 8 cases tested positive. The overall attack rate was 74.1% in families.
Conclusions:
No school outbreaks occurred during the study period. All cases but 1 were initially picked up by school testing. No transmission from school to families was observed.
Millicharged Scalar Fields, Massive Photons and the Breaking of $SU(3)_{C} \times U(1)_{\rm EM}$
Creators: name: West, Jennifer Rittenhouse
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Under the assumption that the current epoch of the Universe is not special, i.e. is not the final state of a long history of processes in particle physics, the cosmological fate of $SU(3)_C \times U(1)_{\rm EM}$ is investigated. Spontaneous symmetry breaking of $U(1)_{\rm EM}$ at the temperature of the Universe today is carried out. The charged scalar field $ϕ_{\rm EM}$ which breaks the symmetry is found to be ruled out for the charge of the electron, $q=e$. Scalar fields with millicharges are viable and limits on their masses and charges are found to be $q\lesssim10^{-3}e$ and $m_{ϕ_{\rm EM}}\lesssim10^{-5} \rm eV$. Furthermore, it is possible that $U(1)_{\rm EM}$ has already been broken at temperatures higher than $T=2.7K$ given the nonzero limits on the mass of the photon. A photon mass of $m_γ=10^{-18} \rm eV$, the current upper limit, is found to require a spontaneously symmetry breaking scalar mass of $m_{ϕ_{\rm EM}}\sim 10^{-13} \rm eV$ with charge $q=10^{-6}e$, well within the allowed parameter space of the model. Finally, the cosmological fate of the strong interaction is studied. $SU(3)_C$ is tested for complementarity in which the confinement phase of QCD $+$ colored scalars is equivalent to a spontaneously broken $SU(3)$ gauge theory. If complementarity is not applicable, $SU(3)_C$ has multiple symmetry breaking paths with various final symmetry structures. The stability of the colored vacuum at finite temperature in this scenario is nonperturbative and a definitive statement on the fate of $SU(3)_C$ is left open. Cosmological implications for the metastability of the vacua - electromagnetic, color and electroweak - are discussed.
description: 7 pages. Version accepted for publication in PRD
CosmosDG: An hp-Adaptive Discontinuous Galerkin Code for Hyper-Resolved Relativistic MHD
Creators: name: Anninos, Peter
name: Bryant, Colton
name: Fragile, P. Chris
name: Holgado, A. Miguel
name: Lau, Cheuk
name: Nemergut, Daniel
Publisher: name: arXiv
Year: 2017
Subjects: subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Physical sciences

description: We have extended Cosmos++, a multi-dimensional unstructured adaptive mesh code for solving the covariant Newtonian and general relativistic radiation magnetohydrodynamic (MHD) equations, to accommodate both discrete finite volume and arbitrarily high order finite element structures. The new finite element implementation, called CosmosDG, is based on a discontinuous Galerkin (DG) formulation, using both entropy-based artificial viscosity and slope limiting procedures for regularization of shocks. High order multi-stage forward Euler and strong stability preserving Runge-Kutta time integration options complement high order spatial discretization. We have also added flexibility in the code infrastructure allowing for both adaptive mesh and adaptive basis order refinement to be performed separately or simultaneously in a local (cell-by-cell) manner. We discuss in this report the DG formulation and present tests demonstrating the robustness, accuracy, and convergence of our numerical methods applied to special and general relativistic MHD, though we note an equivalent capability currently also exists in CosmosDG for Newtonian systems.
description: 21 pages, 14 figures, submitted to The Astrophysical Journal
Additional file 1: of Morbidity from in-hospital complications is greater than treatment failure in patients with Staphylococcus aureus bacteraemia
Creators: name: Holmes, Natasha
name: J. Owen Robinson
name: Hal, Sebastiaan Van
name: Munckhof, Wendy
name: Athan, Eugene
name: Korman, Tony
name: Cheng, Allen
name: Turnidge, John
name: Johnson, Paul
name: Howden, Benjamin
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Marine Biology
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Appendix Source of clinical data, clinical covariates collected, study flowchart. (DOCX 174 kb)
Negative reflection of elastic guided waves in chaotic and random scattering media
Creators: name: Gérardin, Benoît
name: Laurent, Jérôme
name: Legrand, François
name: Prada, Claire
name: Aubry, Alexandre
Publisher: name: arXiv
Year: 2017
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The propagation of waves in complex media can be harnessed either by taming the incident wave-field impinging on the medium or by forcing waves along desired paths through its careful design. These two alternative strategies have given rise to fascinating concepts such as time reversal or negative refraction. Here, we show how these two processes are intimately linked through the negative reflection phenomenon. A negative reflecting mirror converts a wave of positive phase velocity into its negative counterpart and vice versa. In this article, we experimentally demonstrate this phenomenon with elastic waves in a 2D billiard and in a disordered plate by means of laser interferometry. Despite the complexity of such configurations, the negatively reflected wave field focuses back towards the initial source location, thereby mimicking a phase conjugation operation while being a fully passive process. The super-focusing capability of negative reflection is also highlighted in a monochromatic regime. The negative reflection phenomenon is not restricted to guided elastic waves since it can occur in zero-gap systems such as photonic crystals, chiral metamaterials or graphene. Negative reflection can thus become a tool of choice for the control of waves in all fields of wave physics.
description: 9 pages, 6 figures
Additional file 2 of Spatio-temporal variation of malaria hotspots in Central Senegal, 2008–2012
Creators: name: Dieng, Sokhna
name: Ba, El Hadj
name: Cissé, Badara
name: Sallah, Kankoe
name: Guindo, Abdoulaye
name: Ouedraogo, Boukary
name: Piarroux, Martine
name: Rebaudet, Stanislas
name: Piarroux, Renaud
name: Landier, Jordi
name: Sokhna, Cheikh
name: Gaudart, Jean
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 2. The descriptions of the other transmission periods: 2010–2011 HTP, 2011–2012 HTP, 2008–2009 HTP, 2012 LTP, 2009 LTP and 2008 LTP.