cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Large Rapidity Gap Events in Deep Inelastic Scattering
Creators: name: Wüsthoff, Mark
Publisher: name: arXiv
Year: 1997
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Large Rapidity Gap Events in Deep Inelastic Scattering are discussed in terms of lightcone wave functions for quarks and gluons inside the photon. It is shown that this approach is consistent with earlier, conventional Feynman diagram calculations. An updated parametrization for the cross section is given and a numerical analysis presented.
description: 20 pages with 6 ps-figures in the text
Additional file 3: of HR23B pathology preferentially co-localizes with p62, pTDP-43 and poly-GA in C9ORF72-linked frontotemporal dementia and amyotrophic lateral sclerosis
Creators: name: Riemslagh, Frederike
name: Lans, Hannes
name: Seelaar, Harro
name: Lies-Anne Severijnen
name: Melhem, Shamiram
name: Vermeulen, Wim
name: Aronica, Eleonora
name: R. Pasterkamp
name: Swieten, John
name: Willemsen, Rob
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Developmental Biology

description: Figure S1. Ran-GAP staining in C9FTD cases and non-demented controls. Ran-GAP is predominantly localized to the nucleus and nuclear membrane. Unevenly shaped nuclear membranes occur in both C9ORF72 FTD cases (n = 5) and non-demented controls (n = 3). All scale bars are 20 μm. (PDF 2202 kb)
Our GIS is a Game Engine: Bringing Unity to Spatial Simulation of Rockfalls. GeoComputation 2019
Creators: Harrap, R.M.
Hutchinson, D.J.
Sala, Z.
Ondercin, M.
Difrancesco, P.M.
Publisher: name: University of Alberta Library
Year: 2019

We employ a game engine – Unity – to create a rockfall simulation that integrates high resolution slope data from LiDAR scanning and photogrammetry, simulates hundreds of rocks moving on a slope, and provides outputs relevant to geological engineering decision support. This approach, in contrast to existing rockfall simulation tools that are specific to limited slope types, is general, extensible, and robust. The use of a game engine as a simulator for surface geological processes represents a novel approach to geocomputation that leverages the physics simulation capability of games and the powerful terrain representation and visualization capabilities of 3D game engines.
Localization effects in disordered Kondo lattices
Creators: name: Miranda, E.
name: Dobrosavljevic, V.
Publisher: name: arXiv
Year: 1998
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: We investigate the role of localization effects in the Kondo disorder mechanism for non-Fermi liquid behavior in disordered Kondo lattices. We find that the distribution of Kondo temperatures is strongly affected by fluctuations of the conduction electron density of states, a feature neglected in the previous treatment. For moderate disorder, the self-consistent distribution of Kondo temperatures flows to a universal log-normal form, irrespective of the form of the bare disorder distribution. For sufficient disorder, the system enters a Griffiths phase with diverging thermodynamic responses.
description: 3 pages, 3 figures, Proceedings of SCES98/Paris
Atomistic structure learning
Creators: name: Jørgensen, Mathias S.
name: Mortensen, Henrik L.
name: Meldgaard, Søren A.
name: Kolsbjerg, Esben L.
name: Jacobsen, Thomas L.
name: Sørensen, Knud H.
name: Hammer, Bjørk
Publisher: name: arXiv
Year: 2019
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Machine Learning (cs.LG)
subject: Chemical Physics (physics.chem-ph)
subject: Machine Learning (stat.ML)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: One endeavour of modern physical chemistry is to use bottom-up approaches to design materials and drugs with desired properties. Here we introduce an atomistic structure learning algorithm (ASLA) that utilizes a convolutional neural network to build 2D compounds and layered structures atom by atom. The algorithm takes no prior data or knowledge on atomic interactions but inquires a first-principles quantum mechanical program for physical properties. Using reinforcement learning, the algorithm accumulates knowledge of chemical compound space for a given number and type of atoms and stores this in the neural network, ultimately learning the blueprint for the optimal structural arrangement of the atoms for a given target property. ASLA is demonstrated to work on diverse problems, including grain boundaries in graphene sheets, organic compound formation and a surface oxide structure. This approach to structure prediction is a first step toward direct manipulation of atoms with artificially intelligent first principles computer codes.
Additional file 1: of Cancer patientsâ use of complementary and alternative medicine in Sweden: a cross-sectional study
Creators: name: Wode, Kathrin
name: Henriksson, Roger
name: Sharp, Lena
name: Stoltenberg, Anna
name: Nordberg, Johanna HĂśk
Publisher: name: figshare
Year: 2019
Subjects: subject: Cell Biology
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: Questionnaire_eng_Wode et al_190128.pdf; English translation of used Swedish questionnaire. Description of data: Questionnaire containing 19 questions. (PDF 313 kb)
Upper Bound on R_b in Two Higgs Doublet Model from Lepton Universality
Creators: name: Hisano, Junji
name: Kiyoura, Shingo
name: Murayama, Hitoshi
Publisher: name: arXiv
Year: 1997
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: It has been known that $R_b$ can be enhanced in the two Higgs doublet model if $\tan β$ is large. We point out that a similar enhancement in $Γ(Z \to τ^+ τ^-)$ is large enough to place a constraint on such a possibility. We obtain a 95% CL upper bound $ΔR_b/R_{b} < 0.73%$ in this model for the $\overline{MS}$ mass $m_{b} (m_{Z}) = 3.0$ GeV. The 1996 world average is $ΔR_{b}/R_{b}$ = $0.97% \pm 0.51%$. We used the $m_{b}(m_{Z})$ to determine the bottom Yukawa coupling instead of $m_b(m_{b})$ unlike in previous analyses, and also an improved experimental test of the lepton universality in $Z$ decay, which made our results qualitatively different.
description: 14 pages, LaTeX with epsfig.sty, including 5 figures
Embedding multiple disciplinary affiliation identities in shared modules to enhance curriculum design workshop at the University of Greenwich SHIFT Conference 2024
Creators: name: Decker, Olufemi Sallyane
name: Sims, Dr Stuart
name: George, Dr Rachel
name: Recao, Maria Mateo
name: Girdley, Ryan
name: Pullen, Emma
name: Pashchenko, Anastasiia
name: Achili, Gulia
name: Caussat, Paul
name: Cerasuolo, Diletta
Publisher: name: University of Lincoln
Year: 2024
Subjects: X342 - Academic studies in higher education

description: This project explores how differences in student disciplinary affiliations are balanced with tutor disciplinarity when designing shared modules. By identifying specific activities, contexts, barriers, enablers and other factors that will increase the likelihood of successful implementation of an interdisciplinary and inclusive approach, this research will inform the development of a toolkit that will explicitly underpin curriculum design in the case of shared modules.The preliminary findings of the staff questionnaire were presented and disseminated at the SHIFT Conference at the University of Greenwich alongside a discursive workshop with other higher education practitioners regarding the challenges and opportunities faced when designing and running shared modules.
IMPROVING THE ENERGY EFFICIENCY OF THE TGMP-114S STEAM BOILER DUE TO BURNING IN THE FORM OF OIL-WATER MIXED EMULSION
Creators: name: Djabborov Baxtiyor Hamid oʻgʻli  Abduvaliyev Abbosxon Obidxon oʻgʻli  Normuminov Jahongir Abdusamiyevich  Badalova Dildora Abdumalikovna
Publisher: name: Zenodo
Year: 2024

description: This article investigates the enhancement of energy efficiency in the TGMP-114S steam boiler through the utilization of oil-water mixed emulsion as a combustion fuel. The study explores the combustion characteristics, thermal performance, and emissions profile of the boiler when operated with the emulsified fuel. Experimental results demonstrate notable improvements in energy efficiency, highlighting the potential of oil-water emulsion as a sustainable solution for optimizing boiler performance. The findings contribute to the advancement of energy-efficient technologies in steam boiler applications, with implications for reducing fuel consumption and environmental impact.
Additional file 2: of HR23B pathology preferentially co-localizes with p62, pTDP-43 and poly-GA in C9ORF72-linked frontotemporal dementia and amyotrophic lateral sclerosis
Creators: name: Riemslagh, Frederike
name: Lans, Hannes
name: Seelaar, Harro
name: Lies-Anne Severijnen
name: Melhem, Shamiram
name: Vermeulen, Wim
name: Aronica, Eleonora
name: R. Pasterkamp
name: Swieten, John
name: Willemsen, Rob
Publisher: name: figshare
Year: 2019
Subjects: subject: Biophysics
subject: Medicine
subject: Neuroscience
subject: Pharmacology
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Table S1. Neuropathological scores of C9ORF72 FTD patients. Neuronal loss score was based on hematoxylin and eosin (HE) staining and pathological report and scored as absent (0), mild (1), moderate (2) or severe (3). Pathological scores were based on the degree of pathology as absent (0), rare (1), occasional (2), moderate (3), or numerous (4). Brain areas: F = frontal cortex, T = temporal cortex, M = motor cortex, H = hippocampus dentate gyrus, C = cerebellum. NCI = neuronal cytoplasmic inclusion, NII = neuronal intranuclear inclusion, DNs = dystrophic neurites. (DOCX 23 kb)
MOESM10 of Long noncoding RNA LCAT1 functions as a ceRNA to regulate RAC1 function by sponging miR-4715-5p in lung cancer
Creators: name: Yang, Juze
name: Qiu, Qiongzi
name: Qian, Xinyi
name: Yi, Jiani
name: Jiao, Yiling
name: Yu, Mengqian
name: Li, Xufan
name: Li, Jia
name: Mi, Chunyi
name: Zhang, Jisong
name: Lu, Bingjian
name: Chen, Enguo
name: Liu, Pengyuan
name: Lu, Yan
Publisher: name: figshare
Year: 2019
Subjects: Biophysics
Biochemistry
Molecular Biology
Pharmacology
Chemical Sciences not elsewhere classified
Developmental Biology
Cancer

description: Additional file 10: Figure S7. RAC1 affects lung cancer cell proliferation, invasion, and migration. (A, B) Proliferation of RAC1 knockdown cells measured by EdU and colony formation assays. (C) Migration and invasion ability of RAC1 knockdown Calu1 and HOP62 cells by transwell migration and invasion assay. (D) Proliferation of Calu1 and HOP62 cells co-transfected with siLCAT1 and pENTER-RAC1 plasmid measured by CCK-8 assay.
Excitation of the Higgs Mode in a Superfluid Fermi Gas in the BCS-BEC Crossover
Creators: name: Tokimoto, Jun
name: Tsuchiya, Shunji
name: Nikuni, Tetsuro
Publisher: name: arXiv
Year: 2018
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: FOS: Physical sciences

description: In quantum many-body systems with spontaneous breaking of continuous symmetries, Higgs modes emerge as collective amplitude oscillations of order parameters. Recently, Higgs mode has been observed in the ultracold Fermi gas. In the present paper, we use the time-dependent Bogoliubov-de Gennes equations to investigate Higgs amplitude oscillations of the superfluid order parameter in a Fermi gas induced by a rapid change of the ${\it s}$-wave scattering length. In particular, we investigate the Higgs mode with different values of the initial scattering length. We find that the energy of the Higgs mode coincides with the threshold energy of the pair-breaking excitation, and exponent of the power-low decay of the Higgs mode $γ$ continuously changes between $γ=-1/2$ and $γ=-3/2$ through the Bardeen-Cooper-Schrieffer-Bose-Einstein condensation (BCS-BEC) crossover. Moreover, we propose the optimal ramp speed of the scattering length for observing the clearest Higgs oscillations.
Impact assessment of an educational course on vaccinations in a population of medical students
Creators: name: Bechini, Angela
name: Moscadelli, Andrea
name: Sartor, Gino
name: Shtylla, Jonida
name: Guelfi, Maria Renza
name: Bonanni, Paolo
name: Boccalini, Sara
Publisher: name: Journal of Preventive Medicine and Hygiene
Year: 2019

description: The inadequate formation and knowledge about vaccinations of healthcare workers, including doctors, has certainly contributed to the spread of the vaccine hesitancy in recent years. Therefore, it is essential to improve the level of knowledge of future doctors so that they can deal with any hesitation within the population in order to increase the vaccination coverage. The aim of the study is to evaluate the impact of a course about vaccination on the knowledge of medical students. In order to evaluate the efficacy of a certain lecture about vaccinations on medical students, they were asked to complete an anonymous questionnaire before and after the seminar. The two questionnaires contained the same 10 questions regarding knowledge and attitudes about vaccines. Only the students who had attended the lecture were allowed to complete the post-lecture questionnaire. The students could fulfil the questionnaires through the learning management system (LMS) called ‘Moodle’. A descriptive statistical analysis of the data collected through the comparative evaluation of the answers before and after the seminar was performed. The seminar aroused much interest among the students: 100 of them completed the pre-lecture questionnaire and 81 of them completed the post-lecture questionnaire. The results show a positive impact of the seminar, especially about some specific themes: knowledge of the students on the indication of the MPR vaccine strongly improved after the seminar, the number of students who would recommend vaccination for pertussis and influenza during pregnancy increased by 37% and 19% respectively after the seminar, and those aware of the need for Herpes Zoster vaccination over the age of 65 increased by 22%. For future doctors, a thorough knowledge about vaccinations is increasingly required in order to deal with vaccine hesitancy. It is, therefore, important for them to get the opportunity to develop a mastery over these topics. An extracurricular seminar about vaccines, provided in the second half of the course of study, can have a highly positive impact and could stimulate the future healthcare personnel to improve their knowledge on vaccination.
description: Journal of Preventive Medicine and Hygiene, Vol 60 No 3 (2019): 2019603
Classical mechanics technique for quantum linear response
Creators: name: Tsiper, E. V.
Publisher: name: arXiv
Year: 2000
Subjects: subject: Condensed Matter (cond-mat)
subject: Nuclear Theory (nucl-th)
subject: Atomic and Molecular Clusters (physics.atm-clus)
subject: Chemical Physics (physics.chem-ph)
subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences

description: It is shown that the lowest excitation energies of a quantum many-fermion system in the random phase approximation (RPA) can be obtained by minimizing an effective classical energy functional. The minimum can be found very efficiently using generalized Lanczos technique. Application of the new technique to molecular spectra allows to compute excited states at the expense comparable to the ground-state calculations. As an example, the first-principle RPA excitation spectrum of C60 molecule is computed taking into account all 240 valence electrons in the full valence space of the molecule. The results match linear absorption experiment within percents.
description: 4 Revtex pages; 2 PS figures embedded
MOESM1 of Comparative analysis of the complete chloroplast genome sequences of six species of Pulsatilla Miller, Ranunculaceae
Creators: name: Zhang, Tingting
name: Xing, Yanping
name: Xu, Liang
name: Bao, Guihua
name: Zhan, Zhilai
name: Yang, Yanyun
name: Wang, Jiahao
name: Li, Shengnan
name: Zhang, Dachuan
name: Kang, Tingguo
Publisher: name: figshare
Year: 2019
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Plant Biology

description: Additional file 1: Figure S1. Circular gene map of P. chinensis var. kissii.
Non-Appearance of Vortices in Fast Mechanical Expansions of Liquid 4He Through the Lambda Transition
Creators: name: Dodd, M. E.
name: Hendry, P. C.
name: Lawson, N. S.
name: McClintock, P. V. E.
name: Williams, C. D. H.
Publisher: name: arXiv
Year: 1998
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: A new experiment has been performed to study the formation of topological defects (quantized vortices) during rapid quenches of liquid 4He through the superfluid transition, with particular care taken to minimise vortex creation via conventional hydrodynamic flow processes. It is found that the generated vortices, if any, are being produced at densities at least two orders of magnitude less than might be expected on the basis of the Kibble-Zurek mechanism.
description: 4 pages plus 4 Postscript figures
title: Atlas des latérites nickélifères de Nouvelle-Calédonie. Les gisements de nickel latéritique de Nouvelle-Calédonie, volume V
Creators: name: Fritsch, Emmanuel
name: Bailly, Laurent
name: Sevin, Brice
Publisher: name: CNRT Nickel et son environnement
Year: 2017
Subjects: subject: FOS: Earth and related environmental sciences
valueUri: http://www.oecd.org/science/inno/38235147.pdf

description: Programmes Nickal et Analyse fine des minerais. (Tome Nickel et Technologie)
Actiniaria Hertwig 1882
Creators: name: Izumi, Takato
name: Yanagi, Kensuke
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Cnidaria
Anthozoa
Actiniaria

description: Order ACTINIARIA Hertwig, 1882   Suborder ANENTHEMONAE Rodríguez & Daly, 2014 in Rodríguez et al., 2014
description: Published as part of Izumi, Takato & Yanagi, Kensuke, 2021, Description of the second species of Synhalcurias Carlgren, 1914, Synhalcurias kahakui sp. nov. (Actiniaria: Actinernidae) with redescription of S. elegans (Wassilieff, 1908), pp. 561-574 in Zootaxa 5048 (4) on page 563, DOI: 10.11646/zootaxa.5048.4.5, http://zenodo.org/record/5556748
Quality improvement of medical records through internal auditing: a comparative analysis
Creators: name: Azzolini, Elena
name: Furia, Giuseppe
name: Cambieri, Andrea
name: Ricciardi, Walter
name: Volpe, Massimo
name: Poscia, Andrea
Publisher: name: Journal of Preventive Medicine and Hygiene
Year: 2019

description: Introduction The systematic evaluation of the quality of medical records is crucial. Nevertheless, even if the improvement of medical records quality represents a priority for every health organization, it might be difficult to realize. This is the first study to assess the efficacy of internal audit as a tool to improve the quality of medical records in hospital setting. Methods The program was carried out in a third level teaching hospital. Trained ad hoc evaluation teams carried out two retrospective assessments of quality of medical records using a random sampling strategy. The quality assessment was performed using a 48-items evaluation grid divided into 9 domains: General; Patient Medical History and Physical Examination; Daily Clinical Progress Notes; Daily Nursing Progress Notes; Drug Therapy Chart; Pain Chart; Discharge Summary; Surgery Register; Informed Consent. After the first evaluation of 1.460 medical records, an audit departmental program was set up. The second evaluation was carried out after the internal auditing for 1.402 medical records. Results Compared to the first analysis, a significant quality amelioration in all the sections of the medical chart was shown with the second analysis, with an increase of all the scores above 50%. The differences found for each section of medical records between the first and second analysis are all significant (p<0.01). Conclusions Internal audits are not just measurement activities but a necessary activity to support the organization in achieving its objectives and assessing the quality of clinical care and maintaining high quality professional performance.
description: Journal of Preventive Medicine and Hygiene, Vol 60 No 3 (2019): 2019603
Additional file 1: of HR23B pathology preferentially co-localizes with p62, pTDP-43 and poly-GA in C9ORF72-linked frontotemporal dementia and amyotrophic lateral sclerosis
Creators: name: Riemslagh, Frederike
name: Lans, Hannes
name: Seelaar, Harro
name: Lies-Anne Severijnen
name: Melhem, Shamiram
name: Vermeulen, Wim
name: Aronica, Eleonora
name: R. Pasterkamp
name: Swieten, John
name: Willemsen, Rob
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Table S3. Antibody information. (DOCX 16 kb)
An epidemiological evaluation of predictors of overweight and obesity in Garhwal region of Uttarakhand.
Creators: name: Shikha, Deep
name: Semwal, Jayanti
name: Srivastav, Ashok Kumar
name: Vyas, Shaili
name: Juyal, Ruchi
Publisher: name: Journal of Preventive Medicine and Hygiene
Year: 2019

description: Background: Overweight and obesity are now considered to be a very serious public health problems, contributing to a number of preventable non communicable diseases and are among the most significant contributors to ill health. Material & method: A cross sectional study was carried out with a total sample size of 632. Multistage stratified random sampling and “Kish” method was applied for selection of study area and selection of study subjects (21-60 years). WHO STEPS for NCD Risk Factor Surveillance, was used to gather the necessary information. Percentage, Chi square, & logistic regression analysis was calculated and significant level was taken at p<0.05. Results: As per Asia Pacific classification 49.3% (majority) of subjects while as per WHO classification 33.3% of subjects were found to be overweight or obese (BMI > 23kg/m2). It was nearly 2 times higher in urban males. Central obesity was more commonly observed in urban subjects (male: 38.9%, female: 77.6%) as compared to rural subjects (males: 17.8%, females: 59.4%). High (at risk) WHR was recorded in 55.9% of total subjects. High (at risk) WHtR was recorded in 66.8% of total subjects while in 54.4% & 79.1% among rural & urban subjects respectively. All the predictors showed higher percentages in females and in urban area. Conclusion: The present study reveals that, there is high prevalence of overweight and obesity in the study population. Certainly, there has been a considerable shift in their dietary and lifestyle profile. The dietary profile is changed to a mixture of rural and urban diets, with higher consumption of saturated fat and low intake of fibre.
description: Journal of Preventive Medicine and Hygiene, Vol 60 No 3 (2019): 2019603
Mesoscopic phase separation in La2CuO4.02 - a 139La NQR study
Creators: name: Nikolaev, E. G.
name: Brom, H. B.
name: Zakharov, A. A.
Publisher: name: arXiv
Year: 2000
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: In crystals of La2CuO4.02 oxygen diffusion can be limited to such small length scales, that the resulting phase separation is invisible for neutrons. Decomposition of the 139La NQR spectra shows the existence of three different regions, of which one orders antiferromagnetically below 17K concomitantly with the onset of a weak superconductivity in the crystal. These regions are compared to the macroscopic phases seen previously in the title compound and the cluster-glass and striped phases reported for the underdoped Sr-doped cuprates.
description: 4 pages, RevTeX, 5 figures, to be published in PRB
Vortex cusps
Creators: name: Elling, Volker
Publisher: name: arXiv
Year: 2019
Subjects: subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences
subject: 76B47

description: We consider pairs of self-similar 2d vortex sheets forming cusps, equivalently single sheets merging into slip condition walls, as in classical Mach reflection at wedges. We derive from the Birkhoff-Rott equation a reduced model yielding formulas for cusp exponents and other quantities as functions of similarity exponent and strain coefficient. Comparison to numerics shows that piecewise quadratic and higher approximation of vortex sheets agree with each other and with the model. In contrast piecewise linear schemes produce spurious results and violate conservation of mass, a problem that may have been undetected in prior work for other vortical flows where even point vortices were sufficient. We find that vortex cusps only exist if the similarity exponent is sufficiently large and if the circulation on the sheet is counterclockwise (for a sheet above the wall with cusp opening to the right), unless a sufficiently positive strain coefficient compensates. Whenever a cusp cannot exist a spiral-ends jet forms instead; we find many jets are so narrow that they appear as false cusps.
MOESM1 of Long noncoding RNA LCAT1 functions as a ceRNA to regulate RAC1 function by sponging miR-4715-5p in lung cancer
Creators: name: Yang, Juze
name: Qiu, Qiongzi
name: Qian, Xinyi
name: Yi, Jiani
name: Jiao, Yiling
name: Yu, Mengqian
name: Li, Xufan
name: Li, Jia
name: Mi, Chunyi
name: Zhang, Jisong
name: Lu, Bingjian
name: Chen, Enguo
name: Liu, Pengyuan
name: Lu, Yan
Publisher: name: figshare
Year: 2019
Subjects: Biochemistry
Medicine
Pharmacology
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Cancer

description: Additional file 1: Table S1. List of antibodies and primers used in this study.
Mariannaea imbricata D. Hirose & K. Watanabe 2021, sp. nov.
Creators: name: Watanabe, Kohei
name: Hirose, Dai
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Fungi
Ascomycota
Sordariomycetes
Hypocreales
Nectriaceae
Mariannaea
Mariannaea imbricata

description: Mariannaea imbricata D. Hirose & K. Watanabe sp. nov. (Figure 3)
MycoBank no.: 840111
 Description:
Sexual morph not observed. Colony diam., 7 d, in mm (average): PDA: 5˚C (2), 10˚C (8), 15˚C (11), 20˚C (26), 25˚C (31), 30˚C (31), and 35˚C (no growth); MEA: 25˚C (34). Colonies on PDA at 25˚C, matted felt at center, indistinctly zonate, with undulate margins, irregularly oriented and coarsely undulated, producing radially oriented fan-shaped structures from the center to margin, amber with white margin and reverse sienna with white margin. Colonies on MEA at 25 °C, matted felt at center, indistinctly zonate, with undulate margins, irregularly oriented and coarsely undulate, producing radially oriented fan-shaped structures from center to margin, white with ochreous margin, and reverse umber with fulvous margin. On PDA: hyphae 1.4‒6.3 µm wide, hyaline, smooth, thin-walled, branched and septate. Conidiophores 167.7‒798.4 µm (mean 451.0 µm, n = 50) long, 3.7‒8.5 µm (mean 6.1 µm, n = 50) wide at the basal cell, generally macronematous, mononematous, erect, septate, smooth thin-walled, hyaline, bearing short branches with 1–2 whorls of 2–5 phialides, or phialides formed in verticils on long main stalk. Phialides 6.2‒16.9 × 1.2‒2.4 (mean 10.4 × 1.7 µm, L/ W 6.2, n = 50), typically slender flask-shaped, hyaline and smooth-walled. Conidia 4.7‒10.9 × 1.8‒3.2 µm (mean 6.2 × 2.5 µm, L/ W 2.5, n = 50), generally fusiform to ellipsoidal, hyaline, smooth and thin-walled, aseptate and produced in imbricate chains. Chlamydospores 7.2‒22.2 × 4.6‒12.3 µm (mean 10.8 × 6.2 µm, L/ W 1.7, n = 50), intercalary or terminal, produced singly or in short chains, globose to sub-globose, hyaline and thick-walled.
 Etymology:
The epithet “imbricata” refers to the irregularly oriented and coarsely undulate morphology from the center to margins of colonies grown on PDA and MEA.
 Type: Sugadaira, Nagano, Japan, 2008, isolated from the decayed needles of Pinus densiflora (Holotype, TNS-F- 91410, dried culture on PDA; ex-type culture, NBRC 33105).
 Notes:
 Mariannaea imbricata is morphologically similar to M. atlantica, M. fusiformis, M. punicea, and M. terricola, but can be distinguished from these congeners by its slender flask-shaped phialides with a smooth-walled texture. The colonies are characterized by an amber to white pigmentation on PDA and a central matted felt texture, and with the center to margins irregularly oriented and coarsely undulate on PDA and MEA. This species does not form reddish-purple colonies. Phylogenetic analysis based on ITS and TUB-2 sequences can also be used to distinguish these species.
description: Published as part of Watanabe, Kohei & Hirose, Dai, 2021, A novel Mariannaea species isolated from decayed pine needles in Japan, pp. 211-220 in Phytotaxa 522 (3) on pages 217-218, DOI: 10.11646/phytotaxa.522.3.4, http://zenodo.org/record/5560419
Reasoning About Safety-Critical Information Flow Between Pilot and Computer
Creators: name: Ahrenbach, Seth
Publisher: name: arXiv
Year: 2018
Subjects: subject: Logic in Computer Science (cs.LO)
subject: FOS: Computer and information sciences
subject: 03B45

description: This paper presents research results that develop a dynamic logic for reasoning about safety-critical information flow among humans and computers. The logic advances previous efforts to develop logics of agent knowledge, which make assumptions that are too strong for realistic human agents. We introduce Dynamic Agent Safety Logic (DASL), based on Dynamic Epistemic Logic (DEL), with extensions to account for safe actions, belief, and the logical relationships among knowledge, belief, and safe action. With this logic we can infer which safety-critical information a pilot is missing when executing an unsafe action. We apply the logic to the Air France 447 incident as a case study and provide a mechanization of the case study in the Coq proof assistant.
description: Published in the Proceedings from the 9th International Symposium of NASA Formal Methods, 2017
Ab Initio Quantum Chemistry using the Density Matrix Renormalization Group
Creators: name: White, Steven R.
name: Martin, Richard L.
Publisher: name: arXiv
Year: 1998
Subjects: subject: Condensed Matter (cond-mat)
subject: FOS: Physical sciences

description: In this paper we describe how the density matrix renormalization group (DMRG) can be used for quantum chemical calculations for molecules, as an alternative to traditional methods, such as configuration interaction or coupled cluster approaches. As a demonstration of the potential of this approach, we present results for the H$_2$O molecule in a standard gaussian basis. Results for the total energy of the system compare favorably with the best traditional quantum chemical methods.
description: Four pages, three encapsulated figures
A Search for Charmless $B\to VV$ Decays
Creators: name: Godang, R.
name: Collaboration, CLEO
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: We have studied two-body charmless decays of the $B$ meson into the final states $ρ^0 ρ^0$, $K^{*0} ρ^0$, $K^{*0} K^{*0}$, $K^{*0} \bar{K^{*0}}$, $K^{*+} ρ^0$, $K^{*+} \bar{K^{*0}}$, and $K^{*+} K^{*-}$ using only decay modes with charged daughter particles. Using 9.7 million $B \bar{B}$ pairs collected with the CLEO detector, we place 90% confidence level upper limits on the branching fractions, $(0.46-7.0)\times 10^{-5}$, depending on final state and polarization.
description: 8 pages postscript, also available through http://w4.lns.cornell.edu/public/CLNS
MOESM20 of Comparative analysis of the complete chloroplast genome sequences of six species of Pulsatilla Miller, Ranunculaceae
Creators: name: Zhang, Tingting
name: Xing, Yanping
name: Xu, Liang
name: Bao, Guihua
name: Zhan, Zhilai
name: Yang, Yanyun
name: Wang, Jiahao
name: Li, Shengnan
name: Zhang, Dachuan
name: Kang, Tingguo
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: Biological Sciences not elsewhere classified

description: Additional file 20: Table S15. Pi values of the coding and no-coding regions in the six Pulsatilla cp genomes.
Additional file 10: of HR23B pathology preferentially co-localizes with p62, pTDP-43 and poly-GA in C9ORF72-linked frontotemporal dementia and amyotrophic lateral sclerosis
Creators: name: Riemslagh, Frederike
name: Lans, Hannes
name: Seelaar, Harro
name: Lies-Anne Severijnen
name: Melhem, Shamiram
name: Vermeulen, Wim
name: Aronica, Eleonora
name: R. Pasterkamp
name: Swieten, John
name: Willemsen, Rob
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Pharmacology
subject: Ecology
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Hematology
subject: 110309 Infectious Diseases

description: Figure S7. Nucleotide excision repair is not affected in C9ORF72 human fibroblasts. A) Dose-response curve for 4 healthy control human fibroblast lines (81E253, 86E1375, 06E0717 and 99E0774) and 4 C9ORF72 human fibroblast lines (13E634, 13E659, 17E0225, 17E0278) and the NER deficient XP25RO human fibroblast line treated with increasing dose of UV-C light (0–12 J/m2). B) Immunofluorescence staining showing the recruitment of NER factors XPC, XPB, XPA, XPF and XPG to local DNA damage (visualized by CPD antibody), induced by 60 J/m2 UV-C irradiation through a microporous filter. Fibroblast lines used for pictures: 13E634, 13E659 and 81E253 C) Human fibroblasts lines were treated with 16 J/m2 UV-C light and incubated with EdU for 1 h to measure unscheduled DNA synthesis (UDS) as measure of DNA repair. The NER-deficient XPC25RO cell line is shown as negative control. Ctrl 1–4 are lines 81E253, 86E1375, 06E0717 and 99E0774 in this order. C9 1–4 are lines 13E634, 13E659, 17E0225, 17E0278 in this order. (PDF 934 kb)
An extension of the standard model with a single coupling parameter
Creators: name: Atance, Mario
name: Cortes, Jose Luis
name: Irastorza, Igor G.
Publisher: name: arXiv
Year: 1997
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We show that it is possible to find an extension of the matter content of the standard model with a unification of gauge and Yukawa couplings reproducing their known values. The perturbative renormalizability of the model with a single coupling and the requirement to accomodate the known properties of the standard model fix the masses and couplings of the additional particles. The implications on the parameters of the standard model are discussed.
description: 13 pages, Latex file, 1 Figure
Quantum model for price forecasting in financial markets
Creators: name: Subias, J. L.
Publisher: name: arXiv
Year: 2019
Subjects: subject: General Finance (q-fin.GN)
subject: Quantum Physics (quant-ph)
subject: FOS: Economics and business
subject: FOS: Physical sciences
subject: J.2; J.4
subject: 81S99, 91G80

description: The present paper describes a practical example in which the probability distribution of the prices of a stock market blue chip is calculated as the wave function of a quantum particle confined in a potential well. This model may naturally explain the operation of several empirical rules used by technical analysts. Models based on the movement of a Brownian particle do not account for fundamental aspects of financial markets. This is due to the fact that the Brownian particle is a classical particle, while stock market prices behave more like quantum particles. When a classical particle meets an obstacle or a potential barrier, it may either bounce or overcome the obstacle, yet not both at a time. Only a quantum particle can simultaneously reflect and transmit itself on a potential barrier. This is precisely what prices in a stock market imitate when they find a resistance level: they partially bounce against and partially overcome it. This can only be explained by admitting that prices behave as quantum rather than as classic particles. The proposed quantum model finds natural justification not only for the aforementioned facts but also for other empirically well-known facts such as sudden changes in volatility, non-Gaussian distribution in prices, among others.
description: 21 pages, 4 figures, bilingual English-Spanish version
MOESM2 of Long noncoding RNA LCAT1 functions as a ceRNA to regulate RAC1 function by sponging miR-4715-5p in lung cancer
Creators: name: Yang, Juze
name: Qiu, Qiongzi
name: Qian, Xinyi
name: Yi, Jiani
name: Jiao, Yiling
name: Yu, Mengqian
name: Li, Xufan
name: Li, Jia
name: Mi, Chunyi
name: Zhang, Jisong
name: Lu, Bingjian
name: Chen, Enguo
name: Liu, Pengyuan
name: Lu, Yan
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Medicine
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Additional file 2: Table S2. Quality control metrics of the RNA sequencing libraries.
Excluded volume effects on the structure of a linear polymer under shear flow
Creators: name: Pierleoni, Carlo
name: Ryckaert, Jean-Paul
Publisher: name: arXiv
Year: 2000
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: The effect of excluded volume interactions on the structure of a polymer in shear flow is investigated by Brownian Dynamics simulations for chains with size $30\leq N\leq 300$. The main results concern the structure factor $S({\bf q})$ of chains of N=300 Kuhn segments, observed at a reduced shear rate $β=\dotγτ=3.2$, where $\dotγ$ is the bare shear rate and $τ$ is the longest relaxation time of the chain. At low q, where anisotropic global deformation is probed, the chain form factor is shown to match the form factor of the continuous Rouse model under shear at the same reduced shear rate, computed here for the first time in a wide range of wave vectors. At high q, the chain structure factor evolves towards the isotropic equilibrium power law $q^{-1/ν}$ typical of self-avoiding walk statistics. The matching between excluded volume and ideal chains at small q, and the excluded volume power law behavior at large q are observed for ${\bf q}$ orthogonal to the main elongation axis but not yet for ${\bf q}$ along the elongation direction itself, as a result of interferences with finite extensibility effects. Our simulations support the existence of anisotropic shear blobs for polymers in good solvent under shear flow for $β>1$ provided chains are sufficiently long.
description: 36 pages, 11 figures, submitted to J. Chem. Phys
The CIPAZ study protocol: An open label randomised controlled trial of azithromycin versus ciprofloxacin for the treatment of children hospitalised with dysentery in Ho Chi Minh City, Vietnam
Creators: name: Baker, Stephen
Publisher: name: Zenodo
Year: 2020
Subjects: Shigella sonnei, bacterial dysentery, antimicrobial resistance, diarrhoea, Vietnam, ciprofloxacin, azithromycin

description: SPIRIT Checklist, ICF, Information sheet and protocol for The CIPAZ study protocol: An open label randomised controlled trial of azithromycin versus ciprofloxacin for the treatment of children hospitalised with dysentery in Ho Chi Minh City, Vietnam
Coarsening Dynamics of Crystalline Thin Films
Creators: name: Siegert, Martin
Publisher: name: arXiv
Year: 1998
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The formation of pyramid-like structures in thin-film growth on substrates with a quadratic symmetry, e.g., {001} surfaces, is shown to exhibit anisotropic scaling as there exist two length scales with different time dependences. Analytical and numerical results indicate that for most realizations coarsening of mounds is described by an exponent n=0.2357. However, depending on material parameters, n may lie between 0 (logarithmic coarsening) and 1/3. In contrast, growth on substrates with triangular symmetries ({111} surfaces) is dominated by a single length scale and an exponent n=1/3.
description: RevTeX, 4 pages, 3 figures
Exclusive electroproduction of phi mesons at 4.2 GeV
Creators: name: CLAS Collaboration
name: Lukashin, K.
name: Smith, E. S.
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: We studied the exclusive reaction e p --> e' p' phi using the phi --> K^+ K^- decay mode. The data were collected using a 4.2 GeV incident electron beam and the CLAS detector at Jefferson Lab. Our experiment covers the range in Q^2 from 0.7 to 2.2 GeV^2, and W from 2.0 to 2.6 GeV. Taken together with all previous data, we find a consistent picture of phi production on the proton. Our measurement shows the expected decrease of the t-slope with the vector meson formation time c Delta tau below 2 fm. At = 0.6 fm, we measure b_phi = 2.27 +- 0.42 GeV^-2. The cross section dependence on W as W^{0.2+-0.1} at Q^2 = 1.3 GeV^2 was determined by comparison with phi production at HERA after correcting for threshold effects. This is the same dependence as observed in photoproduction.
description: 13 pages, LaTeX, 16 eps figures, 3 tables, submitted to Phys Rev C; revised Fig 9 and Subsec "Differential Cross Section"
Low field negative magnetoresistance in double layer structures
Creators: name: Minkov, G. M.
name: Germanenko, A. V.
name: Rut, O. E.
name: Khrykin, O. I.
name: Shashkin, V. I.
name: Danil'tsev, V. M.
Publisher: name: arXiv
Year: 2000
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: The weak localization correction to the conductivity in coupled double layer structures is studied both experimentally and theoretically. Statistics of closed paths has been obtained from the analysis of magnetic field and temperature dependencies of negative magnetoresistance for magnetic field perpendicular and parallel to the structure plane. The comparison of experimental data with results of computer simulation of carrier motion over two 2D layers with scattering shows that inter-layers transitions play decisive role in the weak localization.
description: 5 PRB pages with 5 eps-figures, submitted to Phys.Rev.B
Arbitrary Lagrangian-Eulerian discontinuous Galerkin method for conservation laws on moving simplex meshes
Creators: name: Fu, Pei
name: Schnücke, Gero
name: Xia, Yinhua
Publisher: name: arXiv
Year: 2018
Subjects: subject: Numerical Analysis (math.NA)
subject: FOS: Mathematics
subject: 65-XX Numerical analysis

description: In Klingenberg, Schnücke and Xia (Math. Comp. 86 (2017), 1203-1232) an arbitrary Lagrangian-Eulerian discontinuous Galerkin (ALE-DG) method to solve conservation laws has been developed and analyzed. In this paper, the ALE-DG method will be extended to several dimensions. The method will be designed for simplex meshes. This will ensure that the method satisfies the geometric conservation law, if the accuracy of the time integrator is not less than the value of the spatial dimension. For the semi-discrete method the L2-stability will be proven. Furthermore, an error estimate which provides the suboptimal (k+1/2) convergence with respect to the L-infinity-norm will be presented, when an arbitrary monotone flux is used and for each cell the approximating functions are given by polynomials of degree $k$. The two dimensional fully-discrete explicit method will be combined with the bound preserving limiter developed by Zhang, Xia and Shu in (J. Sci. Comput. 50 (2012), 29-62). This limiter does not affect the high order accuracy of a numerical method. Then, for the ALE-DG method revised by the limiter the validity of a discrete maximum principle will be proven. The numerical stability, robustness and accuracy of the method will be shown by a variety of two dimensional computational experiments on moving triangular meshes.
Functional relations for the order parameters of the chiral Potts model: low-temperature expansions
Creators: name: Baxter, R. J.
Publisher: name: arXiv
Year: 1998
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: This is the third in a series of papers in which we set up and discuss the functional relations for the ``split rapidity line'' correlation function in the N - state chiral Potts model. The order parameters of the model can be obtained from this function. Here we consider the case N = 3 and write the equations explicitly in terms of the hyperelliptic functions parametrization. We also present four-term low-temperature series expansions, which we hope will cast light on the analyticity properties needed to solve the relations. The problem remains unsolved, but we hope that this will prove to be a step in the right direction.
description: 17 pages
Additional file 1: of Parity, breastfeeding, and breast cancer risk by hormone receptor status and molecular phenotype: results from the Nurses’ Health Studies
Creators: name: Fortner, Renée
name: Sisti, Julia
name: Boyang Chai
name: Collins, Laura
name: Rosner, Bernard
name: Hankinson, Susan
name: Rulla Tamimi
name: A. Eliassen
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Computational Biology

description: Table S1. Multivariate-adjusteda hazard ratios (HRs) and 95% confidence intervals for breast cancer by ER/PR status in relation to parity and lactation: Nurses’ Health Study (1976–2012) and Nurses’ Health Study II (1989–2013). Table S2. Multivariate-adjusteda hazard ratios (HRs) and 95% confidence intervals for breast cancer by ER status in relation to parity and lactation, stratified by time since last birth: Nurses’ Health Study (1976–2012) and Nurses’ Health Study II (1989–2013) (DOCX 30 kb)