cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Inostemma americanum
Creators: name: Awad, Jessica
name: Krogmann, Lars
name: Talamas, Elijah
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Platygastridae
Inostemma
Inostemma americanum

description: Inostemma americanum (Ashmead, 1887)
Allotropa americana Ashmead, 1887: 125
Monocrita melanostropha Ashmead, 1887: 126.
Acerota caryae Ashmead, 1887: 128.
Acerota americana (Ashmead, 1887) – Muesebeck et al. 1951: 707.
Monocrita melanostropha Ashmead, 1887 – Muesebeck et al. 1951: 707.
Acerota caryae Ashmead, 1887 – Muesebeck et al. 1951: 707.
Inostemma caryae (Ashmead, 1887) – Masner 1964: 146.
Inostemma americanum (Ashmead, 1887) – Masner 1964: 146.
Material examined
Lectotype of Acerota caryae
USA • 1 ♀; Florida, Jacksonville; USNM USNMENT00979986.
Remarks
Although this specimen represents the first species to be placed in Acerota, it is not congeneric with specimens identified by Förster. Ashmead (1887) named three species in the same paper, which were all later synonymized under the name Inostemma americanum.
description: Published as part of Awad, Jessica, Krogmann, Lars & Talamas, Elijah, 2023, Taxonomic history and review of the Förster genera of Platygastridae (Hymenoptera: Platygastroidea), pp. 1-46 in European Journal of Taxonomy 875 (1) on page 6, DOI: 10.5852/ejt.2023.875.2137, http://zenodo.org/record/8047251
Lasioseius leitnerae Franz 1954
Creators: name: De Moraes, Gilberto J.
name: Britto, Erika P. J.
name: Mineiro, Jefferson L. De C.
name: Halliday, Bruce
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Mesostigmata
Ascidae
Lasioseius
Lasioseius leitnerae

description: Lasioseius leitnerae Franz, 1954
Lasioseius leitnerae Franz, 1954: 350.
Lasioseius leitnerae.—Schmölzer, 1995: 38; Kofler & Schmölzer, 2000: 140.
NOTE: Franz (1954) stated that C. Willmann was not familiar with this species, and considered it to be undescribed. We have not been able to locate a description of a species under this name. Schmölzer (1995) and Kofler & Schmölzer (2000) specifically stated that Lasioseius leitnerae is a nomen nudum.
description: Published as part of De Moraes, Gilberto J., Britto, Erika P. J., Mineiro, Jefferson L. De C. & Halliday, Bruce, 2016, Catalogue of the mite families Ascidae Voigts & Oudemans, Blattisociidae Garman and Melicharidae Hirschmann (Acari: Mesostigmata), pp. 1-299 in Zootaxa 4112 (1) on page 244, DOI: 10.11646/zootaxa.4112.1.1, http://zenodo.org/record/399477
title: Ground-Water and Surface-Water Hydrology of Camp Maxey, Lamar County, Texas
Creators: name: Fisher, R. Stephen
name: Mace, Robert E. (Robert Earl), 1967-
name: Boghici, Erika M.
Publisher: name: The University of Texas at Austin
Year: 1996
Subjects: subject: surface water
subject: hydrology
subject: Camp Maxey
subject: Lamar County
subject: Texas

description: Ground-water and surface-water investigations of Camp Maxey, Lamar County, Texas, were conducted to provide the Texas Army National Guard information needed to preserve environmental quality and resources while planning and conducting training and preparedness activities. Spatial information such as surface geology, watersheds, elevation data, floodplains, well locations, and water levels were converted to digital files and submitted to the Texas Army National Guard Geographic Information System office at Camp Mabry, Austin, Texas, for future use in managing the training facility. Similar investigations were conducted at Camps Barkeley, Bowie, Mabry, and Swift, and at Fort Wolters. Results of those studies are presented separately. Previously published reports and public data files were examined to obtain background information on the camp and surrounding area. These data were used to guide more focused studies on the training facility. Ground-water studies included locating existing wells in and near the camp, installing new wells as needed, testing and sampling selected wells, determining ground-water levels, chemical compositions, and aquifer hydraulic properties, and developing a conceptual model of ground-water flow. Surface-water studies focused on delineating watersheds and mapping floodplains.
title: Ground-Water and Surface-Water Hydrology of Camp Swift, Bastrop County, Texas
Creators: name: Fisher, R. Stephen
name: Mace, Robert E. (Robert Earl), 1967-
name: Boghici, Erika M.
Publisher: name: The University of Texas at Austin
Year: 1996
Subjects: subject: surface water
subject: hydrology
subject: Camp Swift
subject: Bastrop County
subject: Texas

description: Ground-water and surface-water investigations of Camp Maxey, Lamar County, Texas, were conducted to provide the Texas Army National Guard information needed to preserve environmental quality and resources while planning and conducting training and preparedness activities. Spatial information such as surface geology, watersheds, elevation data, floodplains, well locations, and water levels were converted to digital files and submitted to the Texas Army National Guard Geographic Information System office at Camp Mabry, Austin, Texas, for future use in managing the training facility. Similar investigations were conducted at Camps Barkeley, Bowie, Mabry, and Swift, and at Fort Wolters. Results of those studies are presented separately. Previously published reports and public data files were examined to obtain background information on the camp and surrounding area. These data were used to guide more focused studies on the training facility. Ground-water studies included locating existing wells in and near the camp, installing new wells as needed, testing and sampling selected wells, determining ground-water levels, chemical compositions, and aquifer hydraulic properties, and developing a conceptual model of ground-water flow. Surface-water studies focused on delineating watersheds and mapping floodplains.
Regression via causally informed neural networks
Creators: name: Youssef, Shahenda
name: Doehner, Frank
name: Beyerer, Jürgen
Publisher: name: UB HSU
Year: 2024
Subjects: Neural network
Causal graph
Prior knowledge
Causal inference
Propensity score weighting
Regression

description: Neural Networks have been successful in solving complex problems across various fields. However, they require significant data to learn effectively, and their decision-making process is often not transparent. To overcome these limitations, causal prior knowledge can be incorporated into neural network models. This knowledge improves the learning process and enhances the robustness and generalizability of the models. We propose a novel framework RCINN that involves calculating the inverse probability of treatment weights given a causal graph model alongside the training dataset. These weights are then concatenated as additional features in the neural network model. Then incorporating the estimated conditional average treatment effect as a regularization term to the model loss function, the potential influence of confounding variables can be mitigated, leading to bias minimization and improving the neural network model. Experiments conducted on synthetic and benchmark datasets using the framework show promising results.
Lasioseius manus De Leon 1964
Creators: name: De Moraes, Gilberto J.
name: Britto, Erika P. J.
name: Mineiro, Jefferson L. De C.
name: Halliday, Bruce
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Mesostigmata
Ascidae
Lasioseius
Lasioseius manus

description: Lasioseius manus De Leon, 1964
Lasioseius manus.—Lindquist, 1964: 301.
NOTE: Lindquist (1964a) referred to a species he called Lasioseius manus De Leon, which was supposedly described in a paper in Florida Entomologist, in press in 1964. We cannot find any description of a species by this name. Lindquist (1964a) did not make the name available, because it is an unpublished thesis, which was not produced in numerous identical and durable copies (ICZN Article 8.1.3.1).
description: Published as part of De Moraes, Gilberto J., Britto, Erika P. J., Mineiro, Jefferson L. De C. & Halliday, Bruce, 2016, Catalogue of the mite families Ascidae Voigts & Oudemans, Blattisociidae Garman and Melicharidae Hirschmann (Acari: Mesostigmata), pp. 1-299 in Zootaxa 4112 (1) on page 244, DOI: 10.11646/zootaxa.4112.1.1, http://zenodo.org/record/399477
Allotropa Forster 1856
Creators: name: Awad, Jessica
name: Krogmann, Lars
name: Talamas, Elijah
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Platygastridae
Allotropa

description: Genus Allotropa Förster, 1856
Allotropa Förster, 1856: 106, 109. Type species Inostemma mecrida Walker, 1835, by monotypy.
Remarks
Allotropa is the only Förster genus of Platygastridae currently classified in the Sceliotrachelinae Brues, 1908. The genus was treated by Masner & Huggert (1989). The type species is Inostemma mecrida Walker, 1835, and the lectotype in NHMW was designated by Vlug & Graham (1984).
description: Published as part of Awad, Jessica, Krogmann, Lars & Talamas, Elijah, 2023, Taxonomic history and review of the Förster genera of Platygastridae (Hymenoptera: Platygastroidea), pp. 1-46 in European Journal of Taxonomy 875 (1) on page 6, DOI: 10.5852/ejt.2023.875.2137, http://zenodo.org/record/8047251
Atractides (Atractides) inflatus
Creators: name: Pešić, Vladimir
name: Zawal, Andrzej
name: Ferreira, Sónia
name: Benitez-Bosco, Laura
name: Cruz-Oliveira, Ana
name: Girão, Dinis
name: Padilha, Adriana
name: Turaccio, Paolo
name: Rossini, Samantha
name: Ballini, Lorenzo
name: Staffoni, Giorgia
name: Fratini, Sara
name: Ciofi, Claudio
name: Iannucci, Alessio
name: Ekrem, Torbjørn
name: Stur, Elisabeth
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Trombidiformes
Hygrobatidae
Atractides
Atractides inflatus

description: Atractides (Atractides) inflatus (Walter, 1925)
Material examined.
Portugal, Beja • Odemira, Ribeira de Seixe, Herdade do Vale de Águia, river, 37.398°N, 8.68°W, 75 m a.s.l., 23 May 2023, leg. Ekrem & Benitez-Bosco, 2 ♀ (sequenced). Vila Real • Murça, Noura stream, 41.409°N, 7.417°W, 421 m a.s.l., 12 Jul. 2023 leg. Ferreira & Padilha, 1 ♀ (sequenced).
Remarks.
The specimens from Portugal used in this study match the description of A. inflatus, a species widely distributed in the Mediterranean region, often very frequent in intermittent streams (Pešić et al. 2023 c). The Portuguese specimens were clustered within two BINs: BOLD: AFI 9009, which includes two specimens of A. inflatus from Italy, and BOLD: ACB 4677, which includes specimens of A. inflatus from Iran, Morocco, Montenegro, Turkey, Greece, France, and Italy. The p - distance between these two BINs was estimated at 6.06 %.
Distribution.
Mediterranean, Iran. New for Portugal.
description: Published as part of Pešić, Vladimir, Zawal, Andrzej, Ferreira, Sónia, Benitez-Bosco, Laura, Cruz-Oliveira, Ana, Girão, Dinis, Padilha, Adriana, Turaccio, Paolo, Rossini, Samantha, Ballini, Lorenzo, Staffoni, Giorgia, Fratini, Sara, Ciofi, Claudio, Iannucci, Alessio, Ekrem, Torbjørn & Stur, Elisabeth, 2024, DNA barcode library of Portuguese water mites, with the descriptions of two new species (Acari, Hydrachnidia), pp. 119-171 in ZooKeys 1217 on pages 119-171, DOI: 10.3897/zookeys.1217.131730
Lasioseius muricatus var. transoceanicus Berlese 1918
Creators: name: De Moraes, Gilberto J.
name: Britto, Erika P. J.
name: Mineiro, Jefferson L. De C.
name: Halliday, Bruce
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Mesostigmata
Ascidae
Lasioseius
Lasioseius muricatus
Lasioseius muricatus var. transoceanicus berlese, 1918

description: Lasioseius muricatus var. transoceanicus Berlese, 1918
Lasioseius muricatus var. transoceanicus Berlese, 1918: 190.
Lasioseius (Lasioseius) muricatus var. transoceanicus.— Farrier & Hennessey, 1993: 37.
NOTE: Berlese (1918: 190) referred to Lasioseius muricatus var. transoceanicus, but this taxon was apparently never described. Evans, (1958a: 224, 1958b: 582) referred to Lasioseius muricatus var. transoceanicus Berlese, 1918: 190 as a nomen nudum. Castagnoli & Pegazzano (1985: 419) referred to Lasioseius muricatus floridensis (= transoceanicus) in the Berlese collection, but did not refer to any published description.
description: Published as part of De Moraes, Gilberto J., Britto, Erika P. J., Mineiro, Jefferson L. De C. & Halliday, Bruce, 2016, Catalogue of the mite families Ascidae Voigts & Oudemans, Blattisociidae Garman and Melicharidae Hirschmann (Acari: Mesostigmata), pp. 1-299 in Zootaxa 4112 (1) on page 244, DOI: 10.11646/zootaxa.4112.1.1, http://zenodo.org/record/399477
Additional file 7: of Genome analysis of E. coli isolated from Crohnâ  s disease patients
Creators: name: Rakitina, Daria
name: Manolov, Alexander
name: Kanygina, Alexandra
name: Garushyants, Sofya
name: Baikova, Julia
name: Alexeev, Dmitry
name: Ladygina, Valentina
name: Kostryukova, Elena
name: Larin, Andrei
name: Semashko, Tatiana
name: Karpova, Irina
name: Babenko, Vladislav
name: Ruzilya Ismagilova
name: Malanin, Sergei
name: Gelfand, Mikhail
name: Ilina, Elena
name: Gorodnichev, Roman
name: Lisitsyna, Eugenia
name: Aleshkin, Gennady
name: Scherbakov, Petr
name: Khalif, Igor
name: Shapina, Marina
name: Maev, Igor
name: Andreev, Dmitry
name: Govorun, Vadim
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: plLF82 homologs in CD-associated E. coli. (A) Sequence similarity of CD isolates with the plasmid pLF82 (100Â kb), (B) and (C) functions of proteins common between pLF82 or pJJ1886_4 and CD isolates The functions were obtained from original annotation, complemented by Prokka annotation and BLAST protein similarity search. (D) Sequence similarity of commensal E. coli isolates with plasmids plLF82 and pJJ1886_4 (script for the data is described in supplementary data https://github.com/paraslonic/Rakitina_etal_Crohn_paper/tree/master/plasmidCoverage [41]. (DOC 228Â kb)
Atractides (Atractides) marizae Pesic 2023
Creators: name: Pešić, Vladimir
name: Zawal, Andrzej
name: Ferreira, Sónia
name: Benitez-Bosco, Laura
name: Cruz-Oliveira, Ana
name: Girão, Dinis
name: Padilha, Adriana
name: Turaccio, Paolo
name: Rossini, Samantha
name: Ballini, Lorenzo
name: Staffoni, Giorgia
name: Fratini, Sara
name: Ciofi, Claudio
name: Iannucci, Alessio
name: Ekrem, Torbjørn
name: Stur, Elisabeth
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Trombidiformes
Hygrobatidae
Atractides
Atractides marizae

description: Atractides (Atractides) marizae Pešić, 2023
Material examined.
Portugal, Guarda: • Gouveia, Rio Mondego, Casais de Folgosinho, 40.454°N, 7.493°W, 976 m a.s.l., 24 Aug. 2023, leg. Ferreira, Benitez-Bosco & Padilha, 1 ♀ (sequenced); • Seia, Rio Alva, Praia fluvial de Vila Cova a Coelheira, river, 40.379°N, 7.736°W, 312 m a.s.l., 23 Aug. 2023, leg. Ferreira, Benitez-Bosco & Padilha, 1 ♀ (sequenced). Faro: • Monchique, Caldas de Monchique, 37.287°N, 8.554°W, 23 May 2023, leg. Ekrem & Benitez-Bosco, 1 ♀ (sequenced); • Aljezur, Ribeira de Seixe, Odeceixe, Covão da Serva, 37.374°N, 8.642°W, 100 m a.s.l., 23 May 2023, leg. Ekrem & Benitez-Bosco 1 ♀ (sequenced); • Portimão, 37.237°N, 8.546°W, 23 May 2023, leg. Ferreira & Turaccio 1 ♂ (sequenced).
Remarks.
The specimens from Portugal clustered within BOLD: AER 7878, which includes specimens of Atractides marizae Pešić, 2023, a species recently described by Pešić et al. (2023 b) from Santarém, Portugal. Until now, this rhitrobiontic species was known only from the type locality (Caniceira stream), and the new findings presented in this study demonstrate that A. marizae is more widely distributed in Portugal.
Distribution.
Portugal.
description: Published as part of Pešić, Vladimir, Zawal, Andrzej, Ferreira, Sónia, Benitez-Bosco, Laura, Cruz-Oliveira, Ana, Girão, Dinis, Padilha, Adriana, Turaccio, Paolo, Rossini, Samantha, Ballini, Lorenzo, Staffoni, Giorgia, Fratini, Sara, Ciofi, Claudio, Iannucci, Alessio, Ekrem, Torbjørn & Stur, Elisabeth, 2024, DNA barcode library of Portuguese water mites, with the descriptions of two new species (Acari, Hydrachnidia), pp. 119-171 in ZooKeys 1217 on pages 119-171, DOI: 10.3897/zookeys.1217.131730
Allotropa mecrida
Creators: name: Awad, Jessica
name: Krogmann, Lars
name: Talamas, Elijah
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Platygastridae
Allotropa
Allotropa mecrida

description: Allotropa mecrida (Walker, 1835)
Fig. 2
Inostemma mecrida Walker, 1835: 273.
Allotropa mecrida (Walker, 1835) – Förster, 1856: 109.
Material examined
Lectotype
[ENGLAND] • 1 ♂; [A. Haliday leg.]; original exemplar; NHMW NHMW-HYM#0005310.
description: Published as part of Awad, Jessica, Krogmann, Lars & Talamas, Elijah, 2023, Taxonomic history and review of the Förster genera of Platygastridae (Hymenoptera: Platygastroidea), pp. 1-46 in European Journal of Taxonomy 875 (1) on page 6, DOI: 10.5852/ejt.2023.875.2137, http://zenodo.org/record/8047251
Lasioseius polypori Lindquist 1964
Creators: name: De Moraes, Gilberto J.
name: Britto, Erika P. J.
name: Mineiro, Jefferson L. De C.
name: Halliday, Bruce
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Mesostigmata
Ascidae
Lasioseius
Lasioseius polypori

description: Lasioseius polypori Lindquist, 1964
Lasioseius polypori Lindquist, 1964a: 324, 1964b: 3895. Lasioseius polypori.— Farrier & Hennessey, 1993: 38.
NOTE: this species was described in an unpublished thesis (Lindquist, 1964a), which was not produced in numerous identical and durable copies (ICZN Article 8.1.3.1). The mention of this name in Lindquist (1964b) was not accompanied by a description (ICZN Article 13.1).
description: Published as part of De Moraes, Gilberto J., Britto, Erika P. J., Mineiro, Jefferson L. De C. & Halliday, Bruce, 2016, Catalogue of the mite families Ascidae Voigts & Oudemans, Blattisociidae Garman and Melicharidae Hirschmann (Acari: Mesostigmata), pp. 1-299 in Zootaxa 4112 (1) on page 244, DOI: 10.11646/zootaxa.4112.1.1, http://zenodo.org/record/399477
title: Ground-Water and Surface-Water Hydrology of Fort Wolters, Parker and Palo Pinto Counties, Texas
Creators: name: Fisher, R. Stephen
name: Mace, Robert E. (Robert Earl), 1967-
name: Boghici, Erika M.
Publisher: name: The University of Texas at Austin
Year: 1996
Subjects: subject: surface water
subject: hydrology
subject: Fort Wolters
subject: Parker County
subject: Palo Pinto County
subject: Texas

description: Ground-water and surface-water investigations of Camp Maxey, Lamar County, Texas, were conducted to provide the Texas Army National Guard information needed to preserve environmental quality and resources while planning and conducting training and preparedness activities. Spatial information such as surface geology, watersheds, elevation data, floodplains, well locations, and water levels were converted to digital files and submitted to the Texas Army National Guard Geographic Information System office at Camp Mabry, Austin, Texas, for future use in managing the training facility. Similar investigations were conducted at Camps Barkeley, Bowie, Mabry, and Swift, and at Fort Wolters. Results of those studies are presented separately. Previously published reports and public data files were examined to obtain background information on the camp and surrounding area. These data were used to guide more focused studies on the training facility. Ground-water studies included locating existing wells in and near the camp, installing new wells as needed, testing and sampling selected wells, determining ground-water levels, chemical compositions, and aquifer hydraulic properties, and developing a conceptual model of ground-water flow. Surface-water studies focused on delineating watersheds and mapping floodplains.
Additional file 1: Figure S1. of Novel Plasmodium falciparum metabolic network reconstruction identifies shifts associated with clinical antimalarial resistance
Creators: name: Carey, Maureen
name: Papin, Jason
name: Guler, Jennifer
Publisher: name: Figshare
Year: 2017
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Distribution of genome-wide expression data demonstrates moderate differential expression between sensitive and resistant parasites. Fold change values from differential expression between sensitive and resistant parasites from Cambodia (A) and Vietnam (B) with significantly differentially expressed genes in red. Fold change is the ratio of mean expression in resistant parasites to mean expression in sensitive parasites, for each respective country. (PDF 820Â kb)
Additional file 1: Figure S1. of Novel Plasmodium falciparum metabolic network reconstruction identifies shifts associated with clinical antimalarial resistance
Creators: name: Carey, Maureen
name: Papin, Jason
name: Guler, Jennifer
Publisher: name: Figshare
Year: 2017
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Hematology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology
subject: Computational Biology

description: Distribution of genome-wide expression data demonstrates moderate differential expression between sensitive and resistant parasites. Fold change values from differential expression between sensitive and resistant parasites from Cambodia (A) and Vietnam (B) with significantly differentially expressed genes in red. Fold change is the ratio of mean expression in resistant parasites to mean expression in sensitive parasites, for each respective country. (PDF 820Â kb)
Additional file 1: of Learning intraprofessional collaboration by participating in a consultation programme: what and how did primary and secondary care trainees learn?
Creators: name: Janssen, Marijn
name: Sagasser, Margaretha
name: Laro, Elisabeth
name: Graaf, Jacqueline
name: Haan, Nynke Scherpbier-De
Publisher: name: Figshare
Year: 2017
Subjects: subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Interview questions for the focus groups. (DOCX 13 kb)
Lasioseius muricatus var. floridensis Berlese 1918
Creators: name: De Moraes, Gilberto J.
name: Britto, Erika P. J.
name: Mineiro, Jefferson L. De C.
name: Halliday, Bruce
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Mesostigmata
Ascidae
Lasioseius
Lasioseius muricatus
Lasioseius muricatus var. floridensis berlese, 1918

description: Lasioseius muricatus var. floridensis Berlese, 1918
Lasioseius muricatus var. floridensis Berlese, 1918: 190.
Lasioseius (Lasioseius) muricatus var. floridensis.— Farrier & Hennessey, 1993: 37.
NOTE: Berlese (1918: 190) referred to Lasioseius muricatus var. floridensis, but this taxon was apparently never described. Evans (1958a: 224, 1958b: 582) referred to Lasioseius muricatus var. floridensis Berlese, 1918: 190 as a nomen nudum. Castagnoli & Pegazzano (1985: 419) referred to Lasioseius muricatus floridensis (= transoceanicus) in the Berlese collection, but did not refer to any published description.
description: Published as part of De Moraes, Gilberto J., Britto, Erika P. J., Mineiro, Jefferson L. De C. & Halliday, Bruce, 2016, Catalogue of the mite families Ascidae Voigts & Oudemans, Blattisociidae Garman and Melicharidae Hirschmann (Acari: Mesostigmata), pp. 1-299 in Zootaxa 4112 (1) on page 244, DOI: 10.11646/zootaxa.4112.1.1, http://zenodo.org/record/399477
title: Sand and Gravel Mining in the Brazos River: An Assessment of Erosion Potential and Economic Impact
Creators: name: Gustavson, Thomas C.
name: Bullen, Graeme R.
Publisher: name: The University of Texas at Austin
Year: 1996
Subjects: subject: mining
subject: rivers
subject: erosion
subject: economic impact
subject: Brazos River

description: This work was undertaken at the request of the Texas Parks and Wildlife Department to assess the potential for increased erosion in the Brazos River channel caused by sand and gravel mining as well as to evaluate the economic importance of sand and gravel mining. The potential for increased erosion was assessed by examining the history of channel meandering for river segments upstream, within, and downstream of the area of sand and gravel mining. Point and channel bars were mapped and sampled in river segments that are upstream, within, and downstream of the area of sand and gravel mining. Natural levee and floodplain sediments were cored and sampled for segments upstream, within, and downstream of the area of sand and gravel mining. The size and number of meanders as well as the amount of lateral movement of meanders over time decrease downstream through the study area. This indicates that sand and gravel mining has not resulted in recognizable increases in regional erosion. Grain-size analyses of sediment samples from river bars show little change in the texture of these sediments, indicating that sand and gravel mining has had no recognizable effect on grain-size distribution of the sediments that make up river bars.
Amblyaspis Forster 1856
Creators: name: Awad, Jessica
name: Krogmann, Lars
name: Talamas, Elijah
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Platygastridae
Amblyaspis

description: Genus Amblyaspis Förster, 1856
Figs 3–4
Amblyaspis Förster, 1856: 107, 112. Type species Platygaster tritici Walker, 1835 by subsequent designation by Vlug 1995: 12.
Remarks
The genus Amblyaspis is defined by a conical and setose mesoscutellum in both sexes and the close diagonal appression of the apical two clavomeres in the female. The type species is Platygaster tritici Walker, 1835, the male lectotype of which is in the NMINH, Dublin. According to Vlug (1995), the specimen identified as Pl. tritici in the Förster collection is a different species.
The NHMW includes the female lectotype of Am. walkeri Förster, 1861 and an original exemplar of Am. forticornis (Nees, 1834), the type specimen of which has been lost. We here designate this specimen (NHMW-HYM#0005324) as the neotype of Am. forticornis.
description: Published as part of Awad, Jessica, Krogmann, Lars & Talamas, Elijah, 2023, Taxonomic history and review of the Förster genera of Platygastridae (Hymenoptera: Platygastroidea), pp. 1-46 in European Journal of Taxonomy 875 (1) on pages 6-7, DOI: 10.5852/ejt.2023.875.2137, http://zenodo.org/record/8047251
Atractides (Atractides) nodipalpis
Creators: name: Pešić, Vladimir
name: Zawal, Andrzej
name: Ferreira, Sónia
name: Benitez-Bosco, Laura
name: Cruz-Oliveira, Ana
name: Girão, Dinis
name: Padilha, Adriana
name: Turaccio, Paolo
name: Rossini, Samantha
name: Ballini, Lorenzo
name: Staffoni, Giorgia
name: Fratini, Sara
name: Ciofi, Claudio
name: Iannucci, Alessio
name: Ekrem, Torbjørn
name: Stur, Elisabeth
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Trombidiformes
Hygrobatidae
Atractides
Atractides nodipalpis

description: Atractides (Atractides) nodipalpis (Thor, 1899)
Material examined.
Portugal, Guarda • Seia, Rio Alva, Praia fluvial de Vila Cova a Coelheira, river, 40.379°N, 7.736°W, 312 m a.s.l., 23 Aug. 2023, leg. Ferreira, Benitez-Bosco & Padilha, 1 ♀ (sequenced).
Remarks.
The female, which keyed to A. nodipalpis following Gerecke et al. (2016), forms a unique BIN (BOLD: AFV 2009). The BIN is placed as sister to BOLD: ACR 0209, which includes> 200 specimens of A. nodipalpis, available in the BOLD database. The p - distance between these two BINs was estimated at 4.61 %.
For a long time, A. nodipalpis has been considered the most common species of the genus in Europe. However, in the last years, genetic data revealed that the latter species consists of several distinct lineages, some of them present in the same areas (Gerecke et al. 2022; Pešić et al. 2023 d). For example, Gerecke et al. (2022) mentioned that Norwegian specimens keyed as A. nodipalpis belong to two different lineages, both widely distributed in Norway. The taxonomic status of most of these lineages is still unclear as a number of species have been proposed as synonyms of A. nodipalpis in the past. Nevertheless, Gerecke and collaborators (Gerecke pers. comm. 2022) recently clarified the correct BIN assignment of the true A. nodipalpis lineage. They found that specimens of A. nodipalpis collected near its type locality in Norway belong to the BOLD: ACR 0209 cluster. After that, Pešić et al. (2023 d) examined specimens from the Netherlands belonging to BOLD: ACR 0209 and found that A. nodipalpis can be defined primarily by the shape of male genital plate which has a distinct anteromedial peg-like fissure.
Distribution.
Based on the available records in BOLD, A. nodipalpis has a wide distribution, from SE Europe over the Fennoscandia up to Greenland. In Portugal previously reported from Beira Alta (Santa Comba Dão; Lundblad 1956).
description: Published as part of Pešić, Vladimir, Zawal, Andrzej, Ferreira, Sónia, Benitez-Bosco, Laura, Cruz-Oliveira, Ana, Girão, Dinis, Padilha, Adriana, Turaccio, Paolo, Rossini, Samantha, Ballini, Lorenzo, Staffoni, Giorgia, Fratini, Sara, Ciofi, Claudio, Iannucci, Alessio, Ekrem, Torbjørn & Stur, Elisabeth, 2024, DNA barcode library of Portuguese water mites, with the descriptions of two new species (Acari, Hydrachnidia), pp. 119-171 in ZooKeys 1217 on pages 119-171, DOI: 10.3897/zookeys.1217.131730
Amblyaspis forticornis
Creators: name: Awad, Jessica
name: Krogmann, Lars
name: Talamas, Elijah
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Platygastridae
Amblyaspis
Amblyaspis forticornis

description: Amblyaspis forticornis (Nees, 1834)
Fig. 3
Platygaster forticornis Nees, 1834: 308.
Amblyaspis forticornis (Nees, 1834) – Vlug 1973: 180.
Material examined
Neotype (here designated)
[GERMANY] • 1 ♀; original exemplar; NHMW NHMW-HYM#0005324.
description: Published as part of Awad, Jessica, Krogmann, Lars & Talamas, Elijah, 2023, Taxonomic history and review of the Förster genera of Platygastridae (Hymenoptera: Platygastroidea), pp. 1-46 in European Journal of Taxonomy 875 (1) on page 7, DOI: 10.5852/ejt.2023.875.2137, http://zenodo.org/record/8047251
Additional file 1: of Learning intraprofessional collaboration by participating in a consultation programme: what and how did primary and secondary care trainees learn?
Creators: name: Janssen, Marijn
name: Sagasser, Margaretha
name: Laro, Elisabeth
name: Graaf, Jacqueline
name: Haan, Nynke Scherpbier-De
Publisher: name: Figshare
Year: 2017
Subjects: subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: Mental Health

description: Interview questions for the focus groups. (DOCX 13 kb)
Explanations for the two-component spectral energy distributions of gravitationally lensed stars at high redshifts
Creators: name: Nabizadeh, Armin
name: Zackrisson, Erik
name: Lundqvist, Emma
name: Ricotti, Massimo
name: Park, Seyong
name: Welch, Brian
name: Diego, Jose M.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: Observations of gravitationally lensed, high-mass stars at redshifts $\gtrsim1$ occasionally reveal spectral energy distributions that contain two components with different effective temperatures. Given that two separate stars are involved, it suggests that both stars have simultaneously reached very high magnification, as expected for two stars in a binary system close to the caustic curve of the foreground galaxy-cluster lens. The inferred effective temperatures and luminosities of these stars are, however, difficult to reconcile with known binaries, or even with isolated stars of the same age. Here, we explore three alternative explanations for these cases: circumstellar dust around the cooler of the two stars; age differences of a few Myr among stars in the same star cluster, and a scenario in which the stars originate in two separate star clusters of different age along the lensing caustic. While all of these scenarios are deemed plausible in principle, dust solutions would require more circumstellar extinction than seen in local observations of the relevant super/hypergiant stars. Hence, we argue that age differences between the two stars are the most likely scenario, given the current data.
description: 7 pages, 7 figures, 1 table, submitted to A&A
Lasioseius scabridus Lindquist 1964
Creators: name: De Moraes, Gilberto J.
name: Britto, Erika P. J.
name: Mineiro, Jefferson L. De C.
name: Halliday, Bruce
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Mesostigmata
Ascidae
Lasioseius
Lasioseius scabridus

description: Lasioseius scabridus Lindquist, 1964
Lasioseius scabridus Lindquist, 1964a: 297, 1964b: 3895.
Lasioseius scabridus.— Forest et al., 1982: 12; Farrier & Hennessey, 1993: 38.
NOTE: this species was described in an unpublished thesis (Lindquist, 1964a), which was not produced in numerous identical and durable copies (ICZN Article 8.1.3.1). The mention of this name in Lindquist (1964b) was not accompanied by a description (ICZN Article 13.1).
description: Published as part of De Moraes, Gilberto J., Britto, Erika P. J., Mineiro, Jefferson L. De C. & Halliday, Bruce, 2016, Catalogue of the mite families Ascidae Voigts & Oudemans, Blattisociidae Garman and Melicharidae Hirschmann (Acari: Mesostigmata), pp. 1-299 in Zootaxa 4112 (1) on page 245, DOI: 10.11646/zootaxa.4112.1.1, http://zenodo.org/record/399477
title: Revitalizing a Mature Oil Play: Strategies for Finding and Producing Unrecovered Oil in Frio Fluvial-Deltaic Sandstone Reservoirs of South Texas
Creators: name: Holtz, Mark H.
name: Knox, Paul R.
name: McRae, Lee E.
Publisher: name: The University of Texas at Austin
Year: 1996
Subjects: subject: production
subject: revitalization
subject: Frio Formation
subject: fluvial-deltaic systems
subject: South Texas

description: The Frio Fluvial-Deltaic Sandstone (Vicksburg Fault Zone) oil play of South Texas has produced nearly 1 billion barrels (Bbbl) of oil, yet it still contains about 1.6 Bbbl of unrecovered mobile oil and nearly the same amount of residual oil resources. More than half of the reservoirs in this depositionally complex play have been abandoned, and large volumes of oil may remain unproduced unless advanced characterization techniques are applied to define untapped, incompletely drained, and new pool reservoirs as suitable targets for near-term recovery. Interwell-scale geological facies models of Frio fluvial-deltaic reservoirs are being combined with engineering assessments and geophysical evaluations in order to characterize reservoir architecture and flow-unit boundaries and to determine the controls that these characteristics exert on the location and volume of unrecovered mobile and residual oil. These results will help identify specific opportunities to exploit these heterogeneous reservoirs for incremental recovery by recompletion and strategic infill drilling. Progress during the third project year centered on technology transfer activities. The reserve-growth potential of reservoirs in two fields within the play, Rincon field in Starr County and Tijerina-Canales-Blucher field in Jim Wells County, was documented in a Topical Report published by DOE and in this report. Specific opportunities to exploit untapped and incompletely drained compartments were identified. Results of this effort were also presented at both local and national technical meetings and in two courses hosted by related programs. Preparations have begun for two workshops centered around the activities of this project, as well as the construction of a microcomputer-based Geologic Reservoir Characterization Advisor (GRCA). The short courses, scheduled for April and June 1996, along with the GRCA, will demonstrate for operators of this mature play the potential that remains in reservoirs threatened by premature abandonment and will document methods for locating and efficiently recovering the tremendous remaining resource. The integrated multidisciplinary characterization methodology demonstrated in this project is applicable to reservoirs throughout the Frio Fluvial-Deltaic Sandstone play, to other fluvial-deltaic plays within the Gulf Coast, and more broadly to any mature fluvial-deltaic play in the United States.
Atractides (Atractides) robustus
Creators: name: Pešić, Vladimir
name: Zawal, Andrzej
name: Ferreira, Sónia
name: Benitez-Bosco, Laura
name: Cruz-Oliveira, Ana
name: Girão, Dinis
name: Padilha, Adriana
name: Turaccio, Paolo
name: Rossini, Samantha
name: Ballini, Lorenzo
name: Staffoni, Giorgia
name: Fratini, Sara
name: Ciofi, Claudio
name: Iannucci, Alessio
name: Ekrem, Torbjørn
name: Stur, Elisabeth
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Trombidiformes
Hygrobatidae
Atractides
Atractides robustus

description: Atractides (Atractides) robustus (Sokolow, 1940)
Material examined.
Portugal, Guarda • Manteigas, Zêzere, Covão da Ametade, 40.328°N, 7.587°W, 1431 m a.s.l., 21 Aug. 2023, leg. Ferreira, Benitez-Bosco & Padilha, 1 ♀ (sequenced).
Remarks.
The Portuguese specimen matches the description of A. robustus. The specimen clusters within BOLD: AFF 2463, which includes specimens from Italy, Albania and Poland. The p - distance from the closest neighboring BIN being BOLD: ADZ 9348, which consists of specimens of A. robustus from Germany, Austria, Montenegro, Romania, Italy, Bosnia and Herzegovina, Albania, and Greece, was estimated at 3.15 %.
Recently, Pešić et al. (2023 d) showed that A. robustus, a species originally described from the Caucasus (the affluents of the Kuban River), consists of two distinct lineages, one which includes populations from eastern Turkey and northern Iran, and which is likely conspecific with A. robustus, and the second lineage, which includes A. robustus like specimens from central and southern Europe. The latter lineage, to which BOLD: ADZ 9348 and BOLD: AFF 2463 belong, possible represents a cryptic species new to science. The final decision on the taxonomic status of A. robustus lineages has been postponed until material of the latter species from the Caucasus is available (Pešić et al. 2023 d).
Distribution.
Europe. New for Portugal.
description: Published as part of Pešić, Vladimir, Zawal, Andrzej, Ferreira, Sónia, Benitez-Bosco, Laura, Cruz-Oliveira, Ana, Girão, Dinis, Padilha, Adriana, Turaccio, Paolo, Rossini, Samantha, Ballini, Lorenzo, Staffoni, Giorgia, Fratini, Sara, Ciofi, Claudio, Iannucci, Alessio, Ekrem, Torbjørn & Stur, Elisabeth, 2024, DNA barcode library of Portuguese water mites, with the descriptions of two new species (Acari, Hydrachnidia), pp. 119-171 in ZooKeys 1217 on pages 119-171, DOI: 10.3897/zookeys.1217.131730
Amblyaspis tritici
Creators: name: Awad, Jessica
name: Krogmann, Lars
name: Talamas, Elijah
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Platygastridae
Amblyaspis
Amblyaspis tritici

description: Amblyaspis tritici (Walker, 1835)
Fig. 4
Platygaster tritici Haliday, 1830 – Curtis 1830: 309 (nomen nudum). — Walker 1835: 233.
Platygaster tritici Curtis, 1831 – Muesebeck & Walkley 1956: 327 (nomen nudum).
Platygaster tritici Walker, 1835 – Vlug & Graham 1984: 119; 1995: 12.
Amblyaspis tritici (Walker, 1835) – Vlug 1995: 13.
Material examined
Lectotype
[WESTERN EUROPE] • 1 ♂; [Haliday leg.]; NMINH NMINH_2018_11_30.
Remarks
The type species of Amblyaspis was first designated by Ashmead (1893) as “ Amblyaspis aliena Förster ”. Although Amblyaspis aliena (Nees, 1834) is a valid species with which Förster was familiar, Ashmead’s combination was considered a nomen nudum by Muesebeck & Walkley (1956), who designated “ Platygaster tritici Curtis, 1831 ” instead. The latter name first appeared in Curtis’s British Entomology, a series of illustrations published periodically between 1824 and 1839. Curtis (1830) attributed the species to Haliday. However, there was no description and the combination is therefore also a nomen nudum. The species was not formally described until Walker (1835), who also attributed it to Haliday.
Vlug (1995) designated “ Platygaster tritici Walker, 1835 ” as the type species, with a male lectotype from the Haliday collection in Dublin. Unfortunately, the country of origin of this specimen cannot be determined, as Haliday collected in both England and Ireland, and both countries are mentioned in the original description.
description: Published as part of Awad, Jessica, Krogmann, Lars & Talamas, Elijah, 2023, Taxonomic history and review of the Förster genera of Platygastridae (Hymenoptera: Platygastroidea), pp. 1-46 in European Journal of Taxonomy 875 (1) on pages 8-9, DOI: 10.5852/ejt.2023.875.2137, http://zenodo.org/record/8047251
Additional file 2: Figure S2. of Novel Plasmodium falciparum metabolic network reconstruction identifies shifts associated with clinical antimalarial resistance
Creators: name: Carey, Maureen
name: Papin, Jason
name: Guler, Jennifer
Publisher: name: Figshare
Year: 2017
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Artemisinin resistance is better predicted by metadata classifier than expression classifier. Using full expression profile (A) or metadata (B), including patient and parasite features (see Methods), we can classify samples as artemisinin sensitive or resistant by Random forest analysis. Of the top 25 most important variables (gene probes) in the expression classifier, 12 encoded exported proteins, four genes of complete unknown function, three encoded a putative kinase and putative phosphatases, one encoded a component of dynein, four were uncharacterized genes though to be involved in protein folding or trafficking, and one encoded a transcription factor. Abbreviation key: (all from [49] unless noted otherwise). aprs_mutation = apicoplast ribosomal protein S10 (PF3D7_1460900.1) mutation [14]; fd_mutation = ferredoxin (PF3D7_1318100) mutation [14]; Field_site = location at which blood sample was collected; mdr_mutation = multidrug resistance protein 2 (PF3D7_1447900) mutation; partner_drug = Partner drug (Artemisinin based combination treatment) administered from day 3 onwards; crt_mutation2 = second CRT (PF3D7_0709000) [14] mutation measured; crt_mutation1 = first CRT (PF3D7_0709000) [14] mutation measured; Patient_age_yr = patient age in years; pRBC_sampling_vol_uL = Volume of packed RBC collected (uL); RNA_yield_ug = Amount of Total RNA isolated for each sample (μg); Patient_temp_c = patient temperature at time of admission in Celsius; ART_drug = Type and dosage of artemisinin drug given once a day on days 0, 1 and 2; asexual_parasite_count = Total asexual parasite densities per uL on admission; total_parasite_1000 = total number of parasites in whole sample of infected RBC collected (pRBC collection vol. * total parasite count per uL) divided by 1000; SRCC_asexual_stage = Spearman rank correlation coefficient of the gene expression for the isolate sample to the projected hpi; Kmeans_Grp = expression group (see [49]); Asexual_stage_hpi = Projected hours post invasion (hpi) of the parasite asexual stage; Gender = Patient gender; gam_count = Total gametocyte parasite densities per uL on admission; Hct_percent = patient hematocrit (%) on admission; Sampling_Time_24_hr = Time of sample collection in 24 h format. (PDF 38 kb)
Lasioseius spinalis Tseng 1984
Creators: name: De Moraes, Gilberto J.
name: Britto, Erika P. J.
name: Mineiro, Jefferson L. De C.
name: Halliday, Bruce
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Mesostigmata
Ascidae
Lasioseius
Lasioseius spinalis

description: Lasioseius spinalis Tseng, 1984
Lasioseius spinalis Tseng, 1984: 772.
NOTE: Tseng (1984) included this name in a list of species collected on rice plants and weeds in Taiwan. He stated that a detailed taxonomic study of these species would be published separately. However, we have not been able to find any description of a species under this name.
description: Published as part of De Moraes, Gilberto J., Britto, Erika P. J., Mineiro, Jefferson L. De C. & Halliday, Bruce, 2016, Catalogue of the mite families Ascidae Voigts & Oudemans, Blattisociidae Garman and Melicharidae Hirschmann (Acari: Mesostigmata), pp. 1-299 in Zootaxa 4112 (1) on page 245, DOI: 10.11646/zootaxa.4112.1.1, http://zenodo.org/record/399477
Amblyaspis walkeri Forster 1861
Creators: name: Awad, Jessica
name: Krogmann, Lars
name: Talamas, Elijah
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Platygastridae
Amblyaspis
Amblyaspis walkeri

description: Amblyaspis walkeri Förster, 1861
Amblyaspis walkeri Förster, 1861: 41.
Material examined
Lectotype
SWITZERLAND • 1 ♀; Rosegg-Thal [Roseg Valley]; [Jul. 1861]; [A. Förster leg.]; NHMW NHMW-HYM#0005322.
description: Published as part of Awad, Jessica, Krogmann, Lars & Talamas, Elijah, 2023, Taxonomic history and review of the Förster genera of Platygastridae (Hymenoptera: Platygastroidea), pp. 1-46 in European Journal of Taxonomy 875 (1) on page 9, DOI: 10.5852/ejt.2023.875.2137, http://zenodo.org/record/8047251