cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Empirical relations for cluster RR Lyrae stars revisited
Creators: name: Kovacs, G.
name: Walker, A. R.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Our former study on the empirical relations between the Fourier parameters of the light curves of the fundamental mode RR Lyrae stars and their basic stellar parameters has been extended to considerably larger data sets. The most significant contribution to the absolute magnitude M_v comes from the period P and from the first Fourier amplitude A_1, but there are statistically significant contributions also from additional higher order components, most importantly from A_3 and in a lesser degree from the Fourier phase phi_51. When different colors are combined in reddening-free quantities, we obtain basically period-luminosity-color relations. Due to the log T_eff (B-V, log g, [Fe/H]) relation from stellar atmosphere models, we would expect some dependence also on phi_31. Unfortunately, the data are still not extensive and accurate enough to decipher clearly the small effect of this Fourier phase. However, with the aid of more accurate multicolor data on field variables, we show that this Fourier phase should be present either in V-I or in B-V or in both. From the standard deviations of the various regressions, an upper limit can be obtained on the overall inhomogeneity of the reddening in the individual clusters. This yields sigma_E(B-V)}< 0.012 mag, which also implies an average minimum observational error of sigma_V > 0.018 mag.
description: 14 pages, 11 figures, 11 tables, accepted in Astronomy & Astrophysics
Projection effects in X-ray cores of cooling flow galaxy clusters
Creators: name: Ettori, S.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Recent analyses of XMM and Chandra data of the cores of X-ray bright clusters of galaxies show that modeling with a multi-phase gas in which several temperatures and densities are in equilibrium might not be appropriate. Instead, a single-phase model seems able to reproduce properly the spectra collected in annuli from the central region. The measured single-phase temperature profiles indicate a steep positive gradient in the central 100-200 kpc and the gas density shows a flat profile in the central few tens of kpc. Given this observational evidence, we estimate the contribution to the projected-on-the-sky rings from the cluster emissivity as function of the shell volume fraction sampled. We show that the observed projected X-ray emission mimics the multi-phase status of the plasma even though the input distribution is single-phase. This geometrical projection affects (i) analyses of data where insufficient spatial resolution is accessible, (ii) the central bin when its dimension is comparable to the extension of any flatness in the central gas density profile.
description: 6 pages. MNRAS in press
Thyreocephalus taiwanensis Bordoni 2012, nov.sp.
Creators: name: Bordoni, A.
Publisher: name: Zenodo
Year: 2012
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Staphylinidae
Thyreocephalus
Thyreocephalus taiwanensis

description: Thyreocephalus taiwanensis nov.sp. (Figs 1-5)
E x a m i n e d m a t e r i a l Holotype: Taiwan, Ilan county (hsien), Mingchyh Forest, 1200 m, ricreation area, G. Fabian & O. Merkl 5.IV.2001 (UNHM).
D e s c r i p t i o n: Body length 14,5 mm; length from anterior margin of head to posterior margin of elytra 7 mm. Body flat. Head and pronotum black; elytra testaceous reddish with scutellum brown black; abdomen brown black with red genital segment; antennae and legs brown reddish.
Head sub-quadrangular (Fig. 1), large, with slightly rounded sides and largely rounded posterior angles. Eyes small, just protruding, antennae with 3° article as long as the two following together. Surface with a longitudinal strip of fine punctures; some large punctures as in Fig. 1; a groove near the interior margin of the eyes; numerous deeper punctures on the tempora. Labrum as in Fig.2.
Pronotum clearly narrower and longer than head, with a puncture near the anterior angles.
Elytra long and narrow, sub-rectangular, with sub-parallel and sub-rectilinear sides and marked humeral angles. Surface with numerous series of superficial punctures. Scutellum large, with some superficial punctures. Andomen with fine and dense transversal microstriature and deep puncturation on the sides, with long yellowish setae.
Tergite and sternite of the male genital segment as in Figs 3-4. Aedeagus (Fig. 5), 1,3 mm long, with median lobule very long and of particular structure; parameres short and symmetric; inner sac ribbon-like, narrow and long, irregularly coiled and covered by very fine and sparse scales.
D i s t r i b u t i o n: It is known to me only from the type locality.
E t y m o l o g y: The specific epithet is based on the name of Taiwan.
 N o t e: Until a few time ago it was not clear whether the genus Thyreocepahalus was present in Taiwan. In a recent contribution (BORDONI 2010a) has been shown that the genus occurs also on the island, of which two species are known so now (T. formosanus BORDONI 2010 and T. taiwanensis nov.sp.). The new species differs from T. formosanus, known for a female of Kosempo, by dimension, colouration, puncturation and microsculture of head, and shape of labrum.
description: Published as part of Bordoni, A., 2012, New data on the Oriental Xantholinini. 29 °. New species and new records from Taiwan of the Hungarian Natural History Museum of Budapest (Coleoptera, Staphylinidae) 234 ° contribution to the knowledge of the Staphylinidae, pp. 1053-1056 in Linzer biologische Beiträge 44 (2) on page 1054, DOI: 10.5281/zenodo.5328811
Coelogyne hampelii M. W. Chase & Schuit. 2021, comb. nov.
Creators: name: Chase, Mark W.
name: Gravendeel, Barbara
name: Sulistyo, Bobby P.
name: Wati, Richa Kusuma
name: Schuiteman, André
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Liliopsida
Asparagales
Orchidaceae
Coelogyne
Coelogyne hampelii

description: Coelogyne hampelii (Sulistyo, Gravend., R.Boos & Cootes) M.W.Chase & Schuit., comb. nov.
 Basionym: Dendrochilum hampelii Sulistyo, Gravend., R.Boos & Cootes, PhytoKeys 56: 91 (2015).
description: Published as part of Chase, Mark W., Gravendeel, Barbara, Sulistyo, Bobby P., Wati, Richa Kusuma & Schuiteman, André, 2021, Expansion of the orchid genus Coelogyne (Arethuseae; Epidendroideae) to include Bracisepalum, Bulleyia, Chelonistele, Dendrochilum, Dickasonia, Entomophobia, Geesinkorchis, Gynoglottis, Ischnogyne, Nabaluia, Neogyna, Otochilus, Panisea and Pholidota, pp. 94-134 in Phytotaxa 510 (2) on page 113, DOI: 10.11646/phytotaxa.510.2.1, http://zenodo.org/record/5426332
Libotrechus Ueno 1998
Creators: name: Lin, Wei
name: Tian, Mingyi
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Carabidae
Libotrechus

description: KEY TO THE SPECIES OF LIBOTRECHUS UÉNO
 1. Body stouter; head with only the posterior supraorbital setae present; right mandible tridentate; pronotum with 2 pairs of lateral setae; hind pronotal angles obtuse; elytra with lateral margin distinctly serrate in basal 1/3; 3 rd elytral stria with 2 dorsal pores; scutellar stria present............... L. nishikawai
 1′. Body more slender; head with only anterior supraorbital setae present; right mandible bidentate; pronotum with only the anterior pair of lateral setae, the posterior pair absent; hind pronotal angles nearly rectangular; elytra with lateral margins smooth, not serrate; 3 rd elytral stria with only 1 dorsal pore; scutellar stria absent.............  L. duanensis, new species
description: Published as part of Lin, Wei & Tian, Mingyi, 2014, Supplemental Notes on the GenusLibotrechusUéno (Coleoptera: Carabidae: Trechinae), with Description of a New Species from Guangxi, Southern China, pp. 429-433 in The Coleopterists Bulletin 68 (3) on page 430, DOI: 10.1649/072.068.0314, http://zenodo.org/record/10103308
Effect of size polydispersity on the pitch of nanorod cholesterics
Creators: name: Wensink, H. H.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: Many nanoparticle-based chiral liquid crystals are composed of polydisperse rod-shaped particles with considerable spread in size or shape, affecting the mesoscale chiral properties in, as yet, unknown ways. Using an algebraic interpretation of Onsager-Straley theory for twisted nematics, we investigate the role of length polydispersity on the pitch of nanorod-based cholesterics with a continuous length polydispersity, and find that polydispersity enhances the twist elastic modulus, $K_{2}$, of the cholesteric material without affecting the effective helical amplitude, $K_{t}$. In addition, for the infinitely large average aspect ratios considered here, the dependence of the pitch on the overall rod concentration is completely unaffected by polydispersity. For a given concentration, the increase in twist elastic modulus (and reduction of the helical twist) may be up to 50% for strong size polydispersity, irrespective of the shape of the unimodal length distribution. We also demonstrate that the twist reduction is reinforced in bimodal distributions, by doping a polydisperse cholesteric with very long rods. Finally, we identify a subtle, non-monotonic change of the pitch across the isotropic-cholesteric biphasic region.
description: 8 pages, 4 figures
Stability-preserving model order reduction for linear stochastic Galerkin systems
Creators: name: Pulch, Roland
Publisher: name: arXiv
Year: 2019
Subjects: subject: Numerical Analysis (math.NA)
subject: FOS: Mathematics
subject: 65L05, 65L20, 65L80, 34C20, 34D20

description: Mathematical modeling often yields linear dynamical systems in science and engineering. We change physical parameters of the system into random variables to perform an uncertainty quantification. The stochastic Galerkin method yields a larger linear dynamical system, whose solution represents an approximation of random processes. A model order reduction (MOR) of the Galerkin system is advantageous due to the high dimensionality. However, asymptotic stability may be lost in some MOR techniques. In Galerkin-type MOR methods, the stability can be guaranteed by a transformation to a dissipative form. Either the original dynamical system or the stochastic Galerkin system can be transformed. We investigate the two variants of this stability-preserving approach. Both techniques are feasible, while featuring different properties in numerical methods. Results of numerical computations are demonstrated for two test examples modeling a mechanical application and an electric circuit, respectively.
description: 34 pages, 16 figures
Additional file 3: of The impact of multimorbidity on foot health outcomes in podiatry patients with musculoskeletal foot pain: a prospective observational study
Creators: name: Hendry, Gordon
name: Fenocchi, Linda
name: Mason, Helen
name: Steultjens, Martijn
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Table of FHSQ domain change scores scores for the closed cohort. Table displays FHSQ domain change scores at each study follow-up and results of between group sensitivity analysis. (DOCX 12 kb)
Additional file 2 of Complete genome sequence of Arthrobacter sp. PAMC25564 and its comparative genome analysis for elucidating the role of CAZymes in cold adaptation
Creators: name: Han, So-Ra
name: Kim, Byeollee
name: Jang, Jong Hwa
name: Park, Hyun
name: Oh, Tae-Jin
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics

description: Additional file 2: Supplementary Table 1. Comparative analysis of predicted pathways for glycogen and trehalose metabolism in Arthrobacter species. The symbol + indicates that the isolate produces the enzyme but symbol - indicates that the not produces the enzyme.
Additional file 1 of MicroRNA-143 acts as a tumor suppressor through Musashi-2/DLL1/Notch1 and Musashi-2/Snail1/MMPs axes in acute myeloid leukemia
Creators: name: Li, Fanfan
name: Han, Yixiang
name: Chen, Rongrong
name: Jiang, Yinyan
name: Chen, Cheng
name: Wang, Xiaofang
name: Zhou, Jifan
name: Xu, Qingqing
name: Jiang, Songfu
name: Zhang, Si
name: Yu, Kang
name: Zhang, Shenghui
Publisher: name: figshare
Year: 2023
Subjects: subject: Biophysics
subject: Biochemistry
subject: Physical Sciences not elsewhere classified
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Hematology

description: Additional file 1: Table S2. Sequences of siRNA/miRNA. Table S3. Sequences of primers used for quantitative real-time PCR. Figure S1. Biological effects of miR-143 in AML. Figure S2. Overexpression of MiR-143 hardly unaffected the cell cycle, but suppressed cell migration in AML. Figure S3. Overexpression of MiR-143 inhibited cell growth and induced cell apoptosis in AML. Figure S4. Biological effects of MSI2 in AML. Figure S5. Overexpression of MSI2 promoted growth and inhibited apoptosis in AML. Figure S6. Migration effect of MSI2 in AML. Figure S7. Flow cytometric analysis for human antigen expression in mouse tissues. Figure S8. IHC analysis for human antigen expression in mouse tissues. Figure S9. MSI2 activity was negatively modulated by miR-143 in AML cells. Figure S10. Expression of CD45 in spleen was detected by IHC. Figure S11. Flow cytometric analysis for human antigen expression. Figure S12. DLL1 and Snail1 gene expression in clinic.
Coelogyne haslamii var. quadriloba M. W. Chase & Schuit. 2021, comb. nov.
Creators: name: Chase, Mark W.
name: Gravendeel, Barbara
name: Sulistyo, Bobby P.
name: Wati, Richa Kusuma
name: Schuiteman, André
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Liliopsida
Asparagales
Orchidaceae
Coelogyne
Coelogyne haslamii
Coelogyne haslamii var. quadriloba (j.j.wood) m.w.chase & schuit.

description: Coelogyne haslamii var. quadriloba (J.J.Wood) M.W.Chase & Schuit., comb. nov.
 Basionym: Dendrochilum haslamii var. quadrilobum J.J.Wood, Dendrochilum Borneo: 108 (2001).
description: Published as part of Chase, Mark W., Gravendeel, Barbara, Sulistyo, Bobby P., Wati, Richa Kusuma & Schuiteman, André, 2021, Expansion of the orchid genus Coelogyne (Arethuseae; Epidendroideae) to include Bracisepalum, Bulleyia, Chelonistele, Dendrochilum, Dickasonia, Entomophobia, Geesinkorchis, Gynoglottis, Ischnogyne, Nabaluia, Neogyna, Otochilus, Panisea and Pholidota, pp. 94-134 in Phytotaxa 510 (2) on page 113, DOI: 10.11646/phytotaxa.510.2.1, http://zenodo.org/record/5426332
Likely cavitation and radial motion of stochastic elastic spheres
Creators: name: Mihai, L. Angela
name: Woolley, Thomas E.
name: Goriely, Alain
Publisher: name: arXiv
Year: 2019
Subjects: subject: Classical Physics (physics.class-ph)
subject: Numerical Analysis (math.NA)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: The cavitation of solid elastic spheres is a classical problem of continuum mechanics. Here, we study this problem within the context of "stochastic elasticity" where the constitutive parameters are characterised by probability density functions. We consider homogeneous spheres of stochastic neo-Hookean material, composites with two concentric stochastic neo-Hookean phases, and inhomogeneous spheres of locally neo-Hookean material with a radially varying parameter. In all cases, we show that the material at the centre determines the critical load at which a spherical cavity forms there. However, while under dead-load traction, a supercritical bifurcation, with stable cavitation, is obtained in a static sphere of stochastic neo-Hookean material, for the composite and radially inhomogeneous spheres, a subcritical bifurcation, with snap cavitation, is also possible. For the dynamic spheres, oscillatory motions are produced under suitable dead-load traction, such that a cavity forms and expands to a maximum radius, then collapses again to zero periodically, but not under impulse traction. Under a surface impulse, a subcritical bifurcation is found in a static sphere of stochastic neo-Hookean material and also in an inhomogeneous sphere, whereas in composite spheres, supercritical bifurcations can occur as well. Given the non-deterministic material parameters, the results can be characterised in terms of probability distributions.
description: arXiv admin note: text overlap with arXiv:1901.06145
OYBEKNING "BOLALIK" ASARINING YOSHLAR TARBIYASIDA TUTGAN O`RNI.
Creators: name: Sayfiyeva, Muxlisa
Publisher: name: Zenodo
Year: 2025

description: Ushbu ilmiy maqolada Oybekning hayoti va ijodi, hamda Oybekning «Bolalik» qissasi talqini, bu asarda yoshlar tarbiyasida tutkan o’rnini  ta'sir etuvchi omillar talqin etilgan.
Coelogyne hastiloba M. W. Chase & Schuit. 2021, comb. nov.
Creators: name: Chase, Mark W.
name: Gravendeel, Barbara
name: Sulistyo, Bobby P.
name: Wati, Richa Kusuma
name: Schuiteman, André
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Liliopsida
Asparagales
Orchidaceae
Coelogyne
Coelogyne hastiloba

description: Coelogyne hastiloba (J.J.Wood) M.W.Chase & Schuit., comb. nov.
 Basionym: Dendrochilum hastilobum J.J.Wood, Orchid Rev. 103: 5 (1995 publ. 1994).
description: Published as part of Chase, Mark W., Gravendeel, Barbara, Sulistyo, Bobby P., Wati, Richa Kusuma & Schuiteman, André, 2021, Expansion of the orchid genus Coelogyne (Arethuseae; Epidendroideae) to include Bracisepalum, Bulleyia, Chelonistele, Dendrochilum, Dickasonia, Entomophobia, Geesinkorchis, Gynoglottis, Ischnogyne, Nabaluia, Neogyna, Otochilus, Panisea and Pholidota, pp. 94-134 in Phytotaxa 510 (2) on page 113, DOI: 10.11646/phytotaxa.510.2.1, http://zenodo.org/record/5426332
Dark Halo Shapes and the Fate of Stellar Bars
Creators: name: El-Zant, Amr
name: Shlosman, Isaac
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We investigate the stability of trajectories in barred galaxies with mildly triaxial halos by means of Liapunov exponents. This method is perfectly suitable for time-dependent 3D potentials where surfaces of sections and other simple diagnostics are not applicable. We find that when halos are centrally-concentrated most trajectories starting near the plane containing the bar become chaotic. Moreover, the shape of many of the remaining regular trajectories do not match the bar density distribution, being too round. Therefore, time-independent self-consistent solutions are highly unlikely to be found. When the non-rotating non-axisymmetric perturbation in the potential reaches 10%, almost all trajectories integrated are chaotic and have large Liapunov exponents. No regular trajectories aligned with the bar have been found. Hence, if the evolution of the density figure is directly related to the characteristic timescale of orbital instability, bar dissolution would take place on a timescale of few dynamical times. The slowly rotating non-axisymmetric contribution to the potential required for the onset of widespread chaotic behavior is remarkably small. Systems consisting of centrally-concentrated axisymmetric halos and stellar bars thus appear to be structurally unstable, and small (1%) deviations from perfect axisymmetry should result in a bar dissolution on a timescale significantly smaller than the Hubble time. Since halos found in CDM simulations of large scale structure are both centrally-concentrated and triaxial it is unlikely that stellar bars embedded in such halos would form and survive unless the halos are modified during the formation of the baryonic component.
description: 28 pp., 17 postscript figures. Submitted to Astrophysical Journal
Isotope-shift spectroscopy of the ${^1}S_0 \rightarrow {^3}P_1$ and ${^1}S_0 \rightarrow {^3}P_0$ transitions in strontium
Creators: name: Miyake, Hirokazu
name: Pisenti, Neal C.
name: Elgee, Peter K.
name: Sitaram, Ananya
name: Campbell, Gretchen K.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Atomic Physics (physics.atom-ph)
subject: FOS: Physical sciences

description: Isotope shift spectroscopy with narrow optical transitions provides a benchmark for atomic structure calculations and has also been proposed as a way to constrain theories predicting physics beyond the Standard Model. Here, we have measured frequency shifts of the ${^1}S_0 \rightarrow {^3}P_1$ and ${^1}S_0 \rightarrow {^3}P_0$ transitions between all stable isotopes of strontium relative to ${^{88}}$Sr. This includes the first reported measurements of the ${^1}S_0 \rightarrow {^3}P_0$ isotope shift of ${^{88}}$Sr-${^{86}}$Sr and ${^{88}}$Sr-${^{84}}$Sr. Using the isotope shift measurements of the two transitions, a King plot analysis is performed. These results, combined with other recent isotope shift measurements in other atomic systems, will help refine atomic structure calculations and theoretical predictions for new physics.
description: 9 pages, 4 figures, 3 tables
Additional file 6 of Single-cell transcriptomics reveals immune dysregulation mediated by IL-17A in initiation of chronic lung injuries upon real-ambient particulate matter exposure
Creators: name: Zhang, Rui
name: Chen, Shen
name: Chen, Liping
name: Ye, Lizhu
name: Jiang, Yue
name: Peng, Hui
name: Guo, Zhanyu
name: Li, Miao
name: Jiang, Xinhang
name: Guo, Ping
name: Yu, Dianke
name: Zhang, Rong
name: Niu, Yujie
name: Zhuang, Yuan
name: Aschner, Michael
name: Zheng, Yuxin
name: Li, Daochuan
name: Chen, Wen
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 6. The uncropped and full-length gel and blots for Fig. S6A, C. (A) The full-length gel for Fig. S6A. (B) The uncropped blots for Fig. S6C.
Spitzer Detection of the Transiting Jupiter-analog Exoplanet Kepler-167e
Creators: name: Dalba, Paul A.
name: Tamburo, Patrick
Publisher: name: arXiv
Year: 2019
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: We acquired observations of a partial transit of Kepler-167e, a Jupiter-analog exoplanet on a 1,071-day orbit, well beyond its water ice line, with the Spitzer Space Telescope. The timing of the Spitzer transit is consistent with the ephemeris measured from the two transits observed previously by the Kepler Space Telescope. The Spitzer observation rules out the existence of transit timing variations (TTVs) of order hours to days that are known to exist for other long-period exoplanets. Such TTVs render transit follow-up efforts intractable due to the substantial observing time required and the high risk of non-detection. For Kepler-167e, however, we are now able to predict future transit times through the anticipated era of the James Webb Space Telescope with uncertainties of less than six minutes. We interpret the lack of TTVs as an indication that Kepler-167e either does not have an exterior massive companion or that the gravitational interactions with any companions are below our detection threshold. We also measure Kepler-167e's 3.6-$μ$m transit depth and use exoplanet and solar system models to make predictions about its transmission spectrum. The transiting nature of Kepler-167e and its similarity to Jupiter make it a unique and exceptional target for follow-up atmospheric characterization. Kepler-167e falls into a truly rare category among transiting exoplanets, and with a precisely constrained transit ephemeris, it is poised to serve as a benchmark in comparative investigations between exoplanets and the solar system.
description: 8 pages, 4 figures, 1 table. Accepted to ApJ Letters
Additional file 1 of Complete genome sequence of Arthrobacter sp. PAMC25564 and its comparative genome analysis for elucidating the role of CAZymes in cold adaptation
Creators: name: Han, So-Ra
name: Kim, Byeollee
name: Jang, Jong Hwa
name: Park, Hyun
name: Oh, Tae-Jin
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics

description: Additional file 1: Supplementary Figure S1. Comparative CAZyme-encoding genes found in the genome of Arthrobacter species. GT, glycosyl transferase; GH, glycoside hydrolase; CE, carbohydrate esterase; CBM, carbohydrate binding; and AA, auxiliary activity. CAZyme-encoding genes are colored, as indicated below the figure. Arthrobacter sp.: PAMC25564, 24S4-2, YN, QXT-31, Rue61a, FB24, PAMC25486, ZXY-2, U41, DCT-5, PGP41, ERGS1:01, YC-RL1, Hiyo4, KBS0702, UKPF54-2, MN05-02, Hiyo8, and ATCC21022; Arthrobacter crystallopoietes: DSM 20117; Arthrobacter alpinus: R3.8, ERGS4:06, and A3; Pseudarthrobacter phenanthrenivorans: Sphe3; Pseudarthrobacter chlorophenolicus: A6; and Pseudarthrobacter sulfonivorans: Ar51.
The supplementary file explains oscillations from state transition point of view. Additionally, it also shows coherence dynamics for various Zeeman field angles and different basis sers. from The avian compass can be sensitive even without sustained electron spin coherence
Creators: name: Jain, Rakshit
name: Poonia, Vishvendra S.
name: Saha, Kasturi
name: Saha, Dipankar
name: Ganguly, Swaroop
Publisher: name: The Royal Society
Year: 2021
Subjects: subject: Biophysics
subject: 20699 Quantum Physics not elsewhere classified
subject: FOS: Physical sciences

description: Theoretical studies indicating the presence of long-lived coherence in the radical pair system have engendered questions about its utilitarian role in the avian compass. In this manuscript, we investigate the role of electron spin coherence in multinuclear radical pair system including its impact on compass sensitivity. We find that sustenance of long-lived electron spin coherence is unlikely in a multinuclear hyperfine environment. After probing the role of the hyperfine interactions on the compass, we affirm the hyperfine anisotropy to be an essential parameter for the necessary sensitivity required for the compass action. Thereby, we identify a parameter regime where the compass would exhibit good sensitivity even without sustained electron spin coherence.
Thyreocephalus wallacei Bordoni 2012, nov.sp.
Creators: name: Bordoni, A.
Publisher: name: Zenodo
Year: 2012
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Staphylinidae
Thyreocephalus
Thyreocephalus wallacei

description: Thyreocephalus wallacei nov.sp. (Figs 3-6)
E x a m i n e d m a t e r i a l: Holotype: S-Celebes, Ujung Pandang, F. Lenzi 15.VIII.2009 (cB).
D e s c r i p t i o n: Body length 11,5 mm; length from anterior margin of head to posterior margin of elytra 6,5 mm. Small species.
Black slightly reddish, with almost red genital segment. Head sub-quadrangular, with rounded sides. Eyes small, with diameter as long as the 2°-3° antennomeres together. Surface with very deep, dense puncturation, a part a narrow median strip, and with one very superficial puncture at the end of the ocular grooves. Labrum as in Fig. 3.
Pronotum narrower and longer than head, with sinuate sides. Surface with a puncture near the anterior angles and with some punctures along the lateral margins. Elytra narrower, slightly wider than pronotum, with marked humeral angles. Surface shiny, with deep, fine and regular puncturation, arranged in numerous series.
Abdomen shiny, with fine and dense transversal micro-striation and dense puncturation on the sides, with long yellowish setae.
Tergite and sternite of the male genital segment as in Figs 4-5. Aedeagus (Fig. 6), 1,22 mm long, very narrow, with symmetrical parameres; not evident inner sac.
D i s t r i b u t i o n: Known from the type locality only.
 E t y m o l o g y: Dedicated to Alfred Wallace (1823-1913) that landed on the island in 1859. To this very important explorer and naturalist besides was dedicated only one Staphylinid: S tenus wallacei PUTHZ 1968, synonym of S. nothus BENICK 1929.
 N o t e: This species is very closely in dimension, coloration and puncturation to T. bakeri BORDONI 2002, known only for a female from Luzon (Philippines), but differs for the following characters: punctures on the head non forming divergent striolae, different shape of labrum, pronotum longer than head, without two lateral strip of large punctures. Would be useful therefore the study of a male of T. bakeri, since they are known links between Philippines and Celebes.
description: Published as part of Bordoni, A., 2012, New data on the Xantholinini of the Oriental Region. 27 °. New species from Sulawesi and Sabah (Coleoptera, Staphylinidae) 230 ° contribution to the knowledge of the Staphylinidae, pp. 1035-1040 in Linzer biologische Beiträge 44 (2) on page 1036, DOI: 10.5281/zenodo.5328726
Formation of Globular Clusters: In and Out of Dwarf Galaxies
Creators: name: Gnedin, Oleg Y.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Despite the rapid observational progress in the study of young massive star clusters, the formation of globular clusters still remains poorly understood. Yet, it is emerging that globular cluster formation is intimately linked to the formation of the Galaxy. I discuss a generic scenario of the cluster formation within progenitor galaxies, based on the available observational constraints. The oldest clusters formed around redshift z = 7, but the process continued at least until z = 3. Because of their high density, globular clusters survived when their progenitor galaxies were disrupted by the Galactic tidal field.
description: 6 pages, proceedings of the ESO workshop "Extragalactic Globular Cluster Systems", ed. M. Kissler-Patig
Exosomes decorated with a recombinant SARS-CoV-2 receptor-binding domain as an inhalable COVID-19 vaccine
Creators: name: Cheng, Ke
name: Lutz, Halle
name: Dinh, Phuong-Uyen C.
name: Denny, Thomas N.
name: Popowski, Kristen D.
name: de Juan Abad, Blanca López
name: Liu, Mengrui
name: Li, Zhenhua
name: Zhu, Dashuai
name: Wang, Xianyun
name: DeMarco, C. Todd
name: De Naeyer, Nicole
name: Wang, Zhenzhen
Publisher: name: Springer Nature
Year: 2022

description:
The first two mRNA vaccines against infection by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) that were approved by regulators require a cold chain and were designed to elicit systemic immunity via intramuscular injection. Here we report the design and preclinical testing of an inhalable virus-like-particle as a COVID-19 vaccine that, after lyophilisation, is stable at room temperature for over three months. The vaccine consists of a recombinant SARS-CoV-2 receptor-binding domain (RBD) conjugated to lung-derived exosomes which, with respect to liposomes, enhance the retention of the RBD in both the mucus-lined respiratory airway and in lung parenchyma. In mice, the vaccine elicited RBD-specific IgG antibodies, mucosal IgA responses and CD4+ and CD8+ T cells with a Th1-like cytokine expression profile in the animals’ lungs, and cleared them of SARS-CoV-2 pseudovirus after a challenge. In hamsters, two doses of the vaccine attenuated severe pneumonia and reduced inflammatory infiltrates after a challenge with live SARS-CoV-2. Inhalable and room-temperature-stable virus-like particles may become promising vaccine candidates.
Additional file 1 of Do team and task performance improve after training situation awareness? A randomized controlled study of interprofessional intensive care teams
Creators: name: Jonsson, Karin
name: Brulin, Christine
name: Härgestam, Maria
name: Lindkvist, Marie
name: Hultin, Magnus
Publisher: name: figshare
Year: 2021
Subjects: subject: Space Science
subject: Sociology
subject: FOS: Sociology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1: Supplementary Table 1. Overview of differences in the educational programme between the control and intervention group. Supplementary Table 2. Goal directed task analysis document case 2. Supplementary Table 3. SAGAT questionnaire case 2, freeze one and two.
Convolutional neural networks with fractional order gradient method
Creators: name: Sheng, Dian
name: Wei, Yiheng
name: Chen, Yuquan
name: Wang, Yong
Publisher: name: arXiv
Year: 2019
Subjects: subject: Optimization and Control (math.OC)
subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Mathematics
subject: FOS: Computer and information sciences

description: This paper proposes a fractional order gradient method for the backward propagation of convolutional neural networks. To overcome the problem that fractional order gradient method cannot converge to real extreme point, a simplified fractional order gradient method is designed based on Caputo's definition. The parameters within layers are updated by the designed gradient method, but the propagations between layers still use integer order gradients, and thus the complicated derivatives of composite functions are avoided and the chain rule will be kept. By connecting every layers in series and adding loss functions, the proposed convolutional neural networks can be trained smoothly according to various tasks. Some practical experiments are carried out in order to demonstrate fast convergence, high accuracy and ability to escape local optimal point at last.
Metolinus liwaguensis Bordoni 2012, nov.sp.
Creators: name: Bordoni, A.
Publisher: name: Zenodo
Year: 2012
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Staphylinidae
Metolinus
Metolinus liwaguensis

description: Metolinus liwaguensis nov.sp. (Figs 7-9)
E x a m i n e d m a t e r i a l Holotype: Sabah, Kinabalu Nat. Park, HQ at Liwagu Rv., 1500 m, A. Smetana 30.IV.1987 (cB).
D e s c r i p t i o n: Body length 10 mm; length from anterior margin of head to posterior margin of elytra 5 mm. Body shiny, brown reddish with darker head. Immature specimen. Head and pronotum with fine transversal micro-striature. Head sub-rectangular, long, with sub rectilinear and sub-parallel sides. Deep and sub-horizontal ocular grooves. Surface with little sparse punctures. Pronotum more or less long and wide as the head, with almost obsolete anterior angles and very oblique anterior margins. Dorsal series of 5 punctures. Numerous little punctures on the antero-lateral surface. Elytra longer and wider than pronotum, with marked humeral angles. Very large scutellum with two posterior punctures. Surface of elytra with fine and sparse punctures, arranged in one series near the suture, one median and one lateral. Some punctures are more large, with black long setae. Abdomen with fine and dense transversal micro-striature and fine and sparse puncturation.
Tergite and sternite of the male genital segment as in Figs 7-8. Aedeagus (Fig. 9), 1,4 mm long, with small symmetric parameres; inner sac without visible scales.
D i s t r i b u t i o n: Known from the type locality only.
E t y m o l o g y: It takes its name after the type locality.
 N o t e: This species is related to M. mirabilis BORDONI 2002 from Burma but differs by the reddish coloration and the shape of the aedeagus.
description: Published as part of Bordoni, A., 2012, New data on the Xantholinini of the Oriental Region. 27 °. New species from Sulawesi and Sabah (Coleoptera, Staphylinidae) 230 ° contribution to the knowledge of the Staphylinidae, pp. 1035-1040 in Linzer biologische Beiträge 44 (2) on page 1037, DOI: 10.5281/zenodo.5328726
Coelogyne havilandii M. W. Chase & Schuit. 2021, comb. nov.
Creators: name: Chase, Mark W.
name: Gravendeel, Barbara
name: Sulistyo, Bobby P.
name: Wati, Richa Kusuma
name: Schuiteman, André
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Liliopsida
Asparagales
Orchidaceae
Coelogyne
Coelogyne havilandii

description: Coelogyne havilandii (Pfitzer) M.W.Chase & Schuit., comb. nov.
 Basionym: Dendrochilum havilandii Pfitzer in H.G.A.Engler (ed.), Pflanzenr., IV, 50 II B 7: 107 (1907).
 Heterotypic synonym: Dendrochilum hewittii J.J.Sm., Bull. Dép. Agric. Indes Néerl. 22: 14 (1909).
description: Published as part of Chase, Mark W., Gravendeel, Barbara, Sulistyo, Bobby P., Wati, Richa Kusuma & Schuiteman, André, 2021, Expansion of the orchid genus Coelogyne (Arethuseae; Epidendroideae) to include Bracisepalum, Bulleyia, Chelonistele, Dendrochilum, Dickasonia, Entomophobia, Geesinkorchis, Gynoglottis, Ischnogyne, Nabaluia, Neogyna, Otochilus, Panisea and Pholidota, pp. 94-134 in Phytotaxa 510 (2) on page 113, DOI: 10.11646/phytotaxa.510.2.1, http://zenodo.org/record/5426332
Additional file 1 of Single-cell transcriptomics reveals immune dysregulation mediated by IL-17A in initiation of chronic lung injuries upon real-ambient particulate matter exposure
Creators: name: Zhang, Rui
name: Chen, Shen
name: Chen, Liping
name: Ye, Lizhu
name: Jiang, Yue
name: Peng, Hui
name: Guo, Zhanyu
name: Li, Miao
name: Jiang, Xinhang
name: Guo, Ping
name: Yu, Dianke
name: Zhang, Rong
name: Niu, Yujie
name: Zhuang, Yuan
name: Aschner, Michael
name: Zheng, Yuxin
name: Li, Daochuan
name: Chen, Wen
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1. Supplementary Figures and Supplementary Tables.
Resolving accretion flows in nearby active galactic nuclei with the Event Horizon Telescope
Creators: name: Bandyopadhyay, Bidisha
name: Xie, Fu-Guo
name: Nagar, Neil M.
name: Schleicher, Dominik R. G.
name: Ramakrishnan, Venkatessh
name: Arévalo, Patricia
name: López, Elena
name: Diaz, Yahelyn
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: The Event Horizon Telescope (EHT), now with its first ever image of the photon ring around the supermassive black hole of M87, provides a unique opportunity to probe the physics of supermassive black holes through Very Long Baseline Interferometry (VLBI), such as the existence of the event horizon, the accretion processes as well as jet formation in Low Luminosity AGN (LLAGN). We build a theoretical model which includes an Advection Dominated Accretion Flow (ADAF) with emission from thermal and non-thermal electrons in the flow and a simple radio jet outflow. The predicted spectral energy distribution (SED) of this model is compared to sub-arcsec resolution observations to get the best estimates of the model parameters. The model-predicted radial emission profiles at different frequency bands are used to predict whether the inflow can be resolved by the EHT or with telescopes such as the Global 3-mm VLBI array (GMVA). In this work the model is initially tested with high resolution SED data of M87 and then applied to our sample of 5 galaxies (Cen A, M84, NGC 4594, NGC 3998 and NGC 4278). The model then allows us to predict if one can detect and resolve the inflow for any of these galaxies using the EHT or GMVA within an 8 hour integration time.
description: 17 pages, 8 figures. Published in MNRAS
Why Canonical Disks Cannot Produce Advection Dominated Flows
Creators: name: Molteni, D.
name: Gerardi, G.
name: Valenza, M. A.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Using simple arguments we show that the canonical thin keplerian accretion disks cannot smoothly match any plain advection dominated flow (ADAF) model. By 'plain' ADAF model we mean the ones with zero cooling. The existence of sonic points in exact solutions is critical and imposes constraints that cannot be surpassed adopting 'reasonable' physical conditions at the hypothetical match point. Only the occurrence of new critical physical phenomena may produce a transition. We propose that exact advection models are a class of solutions which don't necessarily involve the standard thin cool disks and suggest a different scenario in which good ADAF solutions could eventually occur.
description: 12 pages, 2 figures, Accepted for publication in Ap.J. Letters
Coelogyne heptaphylla M. W. Chase & Schuit. 2021, comb. nov.
Creators: name: Chase, Mark W.
name: Gravendeel, Barbara
name: Sulistyo, Bobby P.
name: Wati, Richa Kusuma
name: Schuiteman, André
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Liliopsida
Asparagales
Orchidaceae
Coelogyne
Coelogyne heptaphylla

description: Coelogyne heptaphylla (Kraenzl.) M.W.Chase & Schuit., comb. nov.
 Basionym: Dendrochilum heptaphyllum Kraenzl. in H.G.A.Engler (ed.), Pflanzenr., IV, 50 II B 7: 99 (1907).
description: Published as part of Chase, Mark W., Gravendeel, Barbara, Sulistyo, Bobby P., Wati, Richa Kusuma & Schuiteman, André, 2021, Expansion of the orchid genus Coelogyne (Arethuseae; Epidendroideae) to include Bracisepalum, Bulleyia, Chelonistele, Dendrochilum, Dickasonia, Entomophobia, Geesinkorchis, Gynoglottis, Ischnogyne, Nabaluia, Neogyna, Otochilus, Panisea and Pholidota, pp. 94-134 in Phytotaxa 510 (2) on page 113, DOI: 10.11646/phytotaxa.510.2.1, http://zenodo.org/record/5426332
Direct Detection of CDM Substructure
Creators: name: Dalal, N.
name: Kochanek, C. S.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We devise a method to measure the abundance of satellite halos in gravitational lens galaxies, and apply our method to a sample of 7 lens systems. After using Monte Carlo simulations to verify the method, we find that substructure comprises fraction f=0.02 (median, 0.006
description: ApJ in press, 23 pages, 6 figures
Detection of a supernova signature associated with GRB 011121
Creators: name: Bloom, J. S.
name: Kulkarni, S. R.
name: Price, P. A.
name: Reichart, D.
name: Galama, T. J.
name: Schmidt, B. P.
name: Frail, D. A.
name: Berger, E.
name: McCarthy, P. J.
name: Chevalier, R. A.
name: Wheeler, J. C.
name: Halpern, J. P.
name: Fox, D. W.
name: Djorgovski, S. G.
name: Harrison, F. A.
name: Sari, R.
name: Axelrod, T. S.
name: Kimble, R. A.
name: Holtzman, J.
name: Hurley, K.
name: Frontera, F.
name: Piro, L.
name: Costa, E.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Using observations from an extensive monitoring campaign with the Hubble Space Telescope we present the detection of an intermediate-time flux excess which is redder in color relative to the afterglow of GRB 011121, currently distinguished as the gamma-ray burst with the lowest known redshift. The red ``bump,'' which exhibits a spectral roll-over at ~7200 Angstrom, is well described by a redshifted Type Ic supernova that occurred approximately at the same time as the gamma-ray burst event. The inferred luminosity is about half that of the bright supernova 1998bw. These results serve as compelling evidence for a massive star origin of long-duration gamma-ray bursts. Models that posit a supernova explosion weeks to months preceding the gamma-ray burst event are excluded by these observations. Finally, we discuss the relationship between spherical core-collapse supernovae and gamma-ray bursts.
description: Published in the Astrophysical Journal (Letters) on 20 May 2002. Seven LaTeX pages, three Postscript figures, one table
Additional file 2 of Evaluation of sleep quality and anxiety in Italian pediatric healthcare workers during the first wave of COVID-19 pandemic
Creators: name: Di Filippo, Paola
name: Attanasi, Marina
name: Dodi, Giulia
name: Porreca, Annamaria
name: Raso, Massimiliano
name: Di Pillo, Sabrina
name: Chiarelli, Francesco
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 2. Multivariable Linear Regression Model to evaluate the association between the type of professional figure (pediatric secondary care vs primary care staff) and health mental outcomes.
Sub-arcsecond imaging of SiO in the HH 211 protostellar jet
Creators: name: Chandler, Claire J.
name: Richer, John S.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present images of the HH 211 molecular jet in the SiO v=0, J=1-0 line at 43 GHz made with the Very Large Array at approximately 0.5 arcsec resolution. The SiO emission appears to trace primarily internal bowshocks in the outflow, suggesting that the dust and molecular gas are accelerated via prompt entrainment at internal working surfaces in the jet. There is also some evidence for limb-brightening of the SiO emission, indicating that SiO emission may also arise from entrainment in the jet's boundary layer. Excitation temperatures of >~150-200 K are inferred from the SiO emission. Enhancements in the SiO abundance of ~10^6 over interstellar values are observed, and the possible origin of the SiO is discussed.
description: 14 pages, 4 figures. Needs aastex, epsfig, times.sty. To appear in the Astrophysical Journal, July 2001
Additional file 1: of The impact of multimorbidity on foot health outcomes in podiatry patients with musculoskeletal foot pain: a prospective observational study
Creators: name: Hendry, Gordon
name: Fenocchi, Linda
name: Mason, Helen
name: Steultjens, Martijn
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Table of demographic characteristics of the whole sample versus the closed cohort. Table comparing demographic characteristics between the whole sample which includes some missing data, and the closed cohort with complete data at each time point. (DOCX 12 kb)