cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Multi-peak positive solutions to a class of Kirchhoff equations
Creators: name: Luo, Peng
name: Peng, Shuangjie
name: Wang, Chunhua
name: Xiang, Chang-Lin
Publisher: name: arXiv
Year: 2017
Subjects: subject: Analysis of PDEs (math.AP)
subject: FOS: Mathematics
subject: 35A01 35B25 35J20 35J60

description: In the present paper, we consider the nonlocal Kirchhoff problem \begin{eqnarray*} -\left(ε^2a+εb\int_{\mathbb{R}^{3}}|\nabla u|^{2}\right)Δu+V(x)u=u^{p},\,\,\,u>0 & & \text{in }\mathbb{R}^{3}, \end{eqnarray*} where $a,b>0$, $10$ is a parameter. Under some mild assumptions on the function $V$, we obtain multi-peak solutions for $ε$ sufficiently small by Lyapunov-Schmidt reduction method. Even though many results on single peak solutions to singularly perturbed Kirchhoff problems have been derived in the literature by various methods, there exist no results on multi-peak solutions before this paper, due to some difficulties caused by the nonlocal term $\left(\int_{\mathbb{R}^3}|\nabla u|^2\right)Δu$. A remarkable new feature of this problem is that the corresponding unperturbed problem turns out to be a system of partial differential equations, but not a single Kirchhoff equation, which is quite different from most of elliptic singular perturbation problems.
Quenched Chiral Perturbation Theory for Baryons
Creators: name: Labrenz, James N.
name: Sharpe, Stephen R.
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We develop chiral perturbation theory for baryons in quenched QCD. Quenching (the elimination of diagrams containing virtual quark loops) is achieved by extending the Lagrangian method of Bernard and Golterman, and is implemented in a theory where baryons are treated as fixed velocity sources. Our method requires that the octet baryons be represented by a three index tensor rather than by the usual matrix field. We calculate the leading non-analytic corrections to the masses of octet and decuplet baryons. In QCD these are proportional to $M_π^3$. We find that quenching alters the $M_π^3$ terms, but does not completely remove them. In addition, we find non-analytic contributions to baryon masses proportional to $M_π$ and $M_π^2 \log M_π$. These terms, which are artifacts of quenching, dominate over the $M_π^3$ terms for sufficiently small quark masses. We also point out various pecularities of the quenched theory, most notably that the $Δ$ baryon can decay (if kinematically allowed), in the sense that its two point function will be dominated at long Euclidean times by a nucleon plus pion intermediate state.
description: 25 pages, Latex, uses psfig for multiple figures Version to appear in PRD. Several minor typos corrected
Additional file 1 of Association between delay in intensive care unit admission and the host response in patients with community-acquired pneumonia
Creators: name: Pereverzeva, Liza
name: Uhel, Fabrice
name: Peters Sengers, Hessel
name: Cremer, Olaf L.
name: Schultz, Marcus J.
name: Bonten, Marc M. J.
name: Scicluna, Brendon P.
name: van der Poll, Tom
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Physiology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mental Health

description: Additional file 1: Table S1. Baseline characteristics and outcome of patients with community-acquired pneumonia with direct or delayed admission to the intensive care unit, included in the analysis of host response plasma biomarkers.
Challenges and opportunities when migrating CERN e-mail system to open source
Creators: name: Grzywaczewski, Pawel
name: Tenaglia, Giacomo
Publisher: name: Zenodo
Year: 2019

description: E-mail service is considered as a critical collaboration system. We will share our experience regarding technical and organizational challenges when migrating 40 000 mailboxes from Microsoft Exchange to free and open source software solution: Kopano.
Managing the CERN Batch System with Kubernetes
Creators: name: Alvarez, Luis Fernandez
name: Datskova, Olga Vladimirovna
name: Jones, Ben
name: McCance, Gavin
Publisher: name: Zenodo
Year: 2019

description: The CERN Batch Service faces many challenges in order to get ready for the computing demands of future LHC runs. These challenges require that we look at all potential resources, assessing how efficiently we use them and that we explore different alternatives to exploit opportunistic resources in our infrastructure as well as outside of the CERN computing centre. Several projects, like BEER, Helix Nebula Science Cloud and the new OCRE project, have proven our ability to run batch workloads on a wide range of non-traditional resources. However, the challenge is not only to obtain the raw compute resources needed but how to define an operational model that is cost and time efficient, scalable and flexible enough to adapt to a heterogeneous infrastructure. In order to tackle both the provisioning and operational challenges it was decided to use Kubernetes. By using Kubernetes we benefit from a de-facto standard in containerised environments, available in nearly all cloud providers and surrounded by a vibrant ecosystem of open-source projects. Leveraging Kubernetes' built-in functionality, and other open-source tools such as Helm, Terraform and GitLab CI, we have deployed the first cluster prototype which we discuss in detail. The effort has simplified many of the existing operational procedures we currently have, but has also made us rethink many established procedures and assumptions that were only valid in a VM based cloud environment. This contribution presents how we have adopted Kubernetes in the CERN Batch Service, the impact its adoption has had in daily operations, a comparison on resource usage efficiency and the experience so far evolving our infrastructure towards this model.
Wireless Powered Cooperative Jamming for Secure OFDM System
Creators: name: Zhang, Guangchi
name: Xu, Jie
name: Wu, Qingqing
name: Cui, Miao
name: Li, Xueyi
name: Lin, Fan
Publisher: name: arXiv
Year: 2017
Subjects: subject: Information Theory (cs.IT)
subject: FOS: Computer and information sciences

description: This paper studies the secrecy communication in an orthogonal frequency division multiplexing (OFDM) system, where a source sends confidential information to a destination in the presence of a potential eavesdropper. We employ wireless powered cooperative jamming to improve the secrecy rate of this system with the assistance of a cooperative jammer, which works in the harvest-then-jam protocol over two time-slots. In the first slot, the source sends dedicated energy signals to power the jammer; in the second slot, the jammer uses the harvested energy to jam the eavesdropper, in order to protect the simultaneous secrecy communication from the source to the destination. In particular, we consider two types of receivers at the destination, namely Type-I and Type-II receivers, which do not have and have the capability of canceling the (a-priori known) jamming signals, respectively. For both types of receivers, we maximize the secrecy rate at the destination by jointly optimizing the transmit power allocation at the source and the jammer over sub-carriers, as well as the time allocation between the two time-slots. First, we present the globally optimal solution to this problem via the Lagrange dual method, which, however, is of high implementation complexity. Next, to balance tradeoff between the algorithm complexity and performance, we propose alternative low-complexity solutions based on minorization maximization and heuristic successive optimization, respectively. Simulation results show that the proposed approaches significantly improve the secrecy rate, as compared to benchmark schemes without joint power and time allocation.
description: This paper is submitted for possible journal publication
Staircase polygons: moments of diagonal lengths and column heights
Creators: name: Richard, Christoph
Publisher: name: arXiv
Year: 2006
Subjects: subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: We consider staircase polygons, counted by perimeter and sums of k-th powers of their diagonal lengths, k being a positive integer. We derive limit distributions for these parameters in the limit of large perimeter and compare the results to Monte-Carlo simulations of self-avoiding polygons. We also analyse staircase polygons, counted by width and sums of powers of their column heights, and we apply our methods to related models of directed walks.
description: 24 pages, 7 figures; to appear in proceedings of Counting Complexity: An International Workshop On Statistical Mechanics And Combinatorics, 10-15 July 2005, Queensland, Australia
Fig. S1: Dating protracted fault activities: microstructures, microchemistry and geochronology of the Vaikrita Thrust, Main Central Thrust zone, Garhwal Himalaya, NW India
Creators: name: Montemagni, Chiara
name: Montomoli, Chiara
name: Iaccarino, Salvatore
name: Carosi, Rodolfo
name: Jain, Arvind K.
name: Hans-J. Massonne
name: Villa, Igor M.
Publisher: name: Geological Society of London
Year: 2018
Subjects: subject: Geology
subject: FOS: Earth and related environmental sciences

description: Histograms reporting thermometric data obtained with Ti-in-biotite and Ti-in-muscovite geothermometers. (a, c) Data on muscovite along the Sm (muscovite-2) and coronitic around garnet (muscovite-3), respectively. (b, d) Data on biotite along the Sm (biotite-2) and coronitic around garnet (biotite-3), respectively. The legend in (b–d) is the same as in (a).
Quantifying homologous proteins and proteoforms
Creators: name: Malioutov, Dmitry
name: Chen, Tianchi
name: Jaffe, Jacob
name: Airoldi, Edoardo
name: Carr, Steven
name: Budnik, Bogdan
name: Slavov, Nikolai
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantitative Methods (q-bio.QM)
subject: Genomics (q-bio.GN)
subject: Applications (stat.AP)
subject: Methodology (stat.ME)
subject: Machine Learning (stat.ML)
subject: FOS: Biological sciences
subject: FOS: Computer and information sciences

description: Many proteoforms - arising from alternative splicing, post-translational modifications (PTMs), or paralogous genes - have distinct biological functions, such as histone PTM proteoforms. However, their quantification by existing bottom-up mass-spectrometry (MS) methods is undermined by peptide-specific biases. To avoid these biases, we developed and implemented a first-principles model (HIquant) for quantifying proteoform stoichiometries. We characterized when MS data allow inferring proteoform stoichiometries by HIquant, derived an algorithm for optimal inference, and demonstrated experimentally high accuracy in quantifying fractional PTM occupancy without using external standards, even in the challenging case of the histone modification code. HIquant server is implemented at: https://web.northeastern.edu/slavov/2014_HIquant/
Additional file 1 of Prevalence of Oral Potentially Malignant Lesions, Tobacco use, and Effect of Cessation Strategies among Solid Waste Management workers in Northern India: a pre-post intervention study
Creators: name: Khanna, Divya
name: Shruti, Tulika
name: Tiwari, Manish
name: Sharma, Priyanka
name: Khan, Aqusa
name: Ranjan, Sudhir
name: Balasundaram, P.
name: Khargekar, Naveen
name: Chaturvedi, Pankaj
name: Mishra, Aseem
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Science Policy
subject: Mental Health

description: Supplementary Material 1
Additional file 5 of Association between delay in intensive care unit admission and the host response in patients with community-acquired pneumonia
Creators: name: Pereverzeva, Liza
name: Uhel, Fabrice
name: Peters Sengers, Hessel
name: Cremer, Olaf L.
name: Schultz, Marcus J.
name: Bonten, Marc M. J.
name: Scicluna, Brendon P.
name: van der Poll, Tom
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Physiology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mental Health

description: Additional file 5: Figure S1. Common transcriptional response in blood leukocytes obtained on admission in patients with direct or delayed ICU-admission for community-acquired pneumonia relative to health.
Effect of reheating on predictions following multiple-field inflation
Creators: name: Hotinli, Selim C.
name: Frazer, Jonathan
name: Jaffe, Andrew H.
name: Meyers, Joel
name: Price, Layne C.
name: Tarrant, Ewan R. M.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We study the sensitivity of cosmological observables to the reheating phase following inflation driven by many scalar fields. We describe a method which allows semi-analytic treatment of the impact of perturbative reheating on cosmological perturbations using the sudden decay approximation. Focusing on $\mathcal{N}$-quadratic inflation, we show how the scalar spectral index and tensor-to-scalar ratio are affected by the rates at which the scalar fields decay into radiation. We find that for certain choices of decay rates, reheating following multiple-field inflation can have a significant impact on the prediction of cosmological observables.
description: Published in PRD. 4 figures, 10 pages
Face-masked speech understanding in cochlear implant users
Creators: name: Brown, Violet A.
Publisher: name: OSF Registries
Year: 2023
Subjects: subject: Social and Behavioral Sciences

description: NOTE: This preregistration was written in February 2023, but we forgot to submit it. Luckily it just states that we're analyzing data following the conventions of our previous study. This project replicates our previous work on identification of speech produced with various types of face masks across noise levels in young and older adults (Brown, Van Engen, & Peelle, 2021) in a population of cochlear implant users and a control group of normal hearing listeners. The analytical method will be identical to that described in our previous work, and we will follow the protocol outlined in the pre-registration for that experiment (see https://osf.io/g2j94) with the following changes: 1. Rather than using populations of young and older adults, we will use populations of cochlear implant users and a control group of normal hearing listeners. Anyone over the age of 18 is eligible to participate. 2. As stated above, the analyses will mirror those from our previous work. Given the change from two groups differing in age to two groups differing in whether they use cochlear implants, we will first analyze data from both groups separately (as we specified in our previous preregistration for young/older adult data), and we will also analyze the combined data to assess whether cochlear implant users are differentially affected by face masks and background noise than their normal hearing counterparts. 3. We plan to collect data from 20 participants per group after data exclusion. This sample size was determined based on feasibility of collecting data from cochlear implant users. However, if we reach this sample size and are able to identify more cochlear implant users to participate in the study, we will continue collecting data until we have exhausted the sample. In this case, we will not perform any Bayesian analyses or hypothesis testing on the data when we reach our sample size of 20; that is, we will wait until all data have been collected before statistically analyzing the data. 4. We will not conduct model comparisons using LOO and will instead examine 95% credible intervals (in our previous work we did both, but for simplicity we will just use credible intervals) 5. We removed the CESD-R and the 15iSSQ from the experiment. 6. We made minor changes to the listening device questionnaire, including adding a device questionnaire asking participants about their cochlear implants (the text from the two questionnaires is copy/pasted below). Only cochlear implant user will complete the cochlear implant device questionnaire, but all participants will complete the listening device questionnaire.
Prompt emission from the counter jet of a short gamma-ray burst
Creators: name: Yamazaki, Ryo
name: Ioka, Kunihito
name: Nakamura, Takashi
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: The counter jet of a short gamma-ray burst (sGRB) has not yet been observed, while recent discoveries of gravitational waves (GWs) from a binary neutron star (NS) merger GW170817 and the associated sGRB 170817A have demonstrated that off-axis sGRB jets are detectable. We calculate the prompt emission from the counter jet of an sGRB and show that it is typically 23-26 mag in the optical-infrared band 10-10^3 sec after the GWs for an sGRB 170817A-like event, which is brighter than the early macronova (or kilonova) emission and detectable by LSST in the near future. We also propose a new method to constrain the unknown jet properties, such as the Lorentz factor, opening angle, emission radii, and jet launch time, by observing both the forward and counter jets. To scrutinize the counter jets, space GW detectors like DECIGO are powerful in forecasting the merger time (
description: 14 pages, 3 figures, 1 table. Progress of Theoretical and Experimental Physics (PTEP), in press
Decoherence Bounds on Quantum Computation with Trapped Ions
Creators: name: Hughes, Richard J.
name: James, Daniel F. V.
name: Knill, Emanuel H.
name: Laflamme, Raymond
name: Petschek, Albert G.
Publisher: name: arXiv
Year: 1996
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Using simple physical arguments we investigate the capabilities of a quantum computer based on cold trapped ions. From the limitations imposed on such a device by spontaneous decay, laser phase coherence, ion heating and other sources of error, we derive a bound between the number of laser interactions and the number of ions that may be used. The largest number which may be factored using a variety of species of ion is determined.
description: 5 pages in RevTex, 2 figures, the paper is also avalaible at http://qso.lanl.gov/qc/
ServiceX - A Distributed, Caching, Columnar Data Delivery Service
Creators: name: Galewsky, Benjamin
name: Vukotic, Ilija
name: Weinberg, Marc Gabriel
name: Gardner, Robert William
Publisher: name: Zenodo
Year: 2019

description: We will describe a component of the Intelligent Data Delivery Service being developed in collaboration with IRIS-HEP and the LHC experiments. ServiceX is an experiment-agnostic service to enable on-demand data delivery specifically tailored for nearly-interactive vectorized analysis. This work is motivated by the data engineering challenges posed by HL-LHC data volumes and the increasing popularity of python and Spark-based analysis workflows. ServiceX gives analyzers the ability to query events by dataset metadata. It uses containerized transformations to extract just the data required for the analysis. This operation is collocated with the data lake to avoid transferring unnecessary branches over the WAN. Simple filtering operations are supported to further reduce the amount of data transferred. Transformed events are cached in a columnar datastore to accelerate delivery of subsequent similar requests. ServiceX will learn commonly related columns and automatically include them in the transformation to increase the potential for cache hits by other users. Selected events are streamed to the analysis system using an efficient wire protocol that can be readily consumed by a variety of computational frameworks. This reduces time-to-insight for physics analysis by delegating to ServiceX the complexity of event selection, slimming, reformatting, and streaming.
Unusual Wrist Tremor: Unilateral Isometric Tremor?
Creators: Zesiewicz, Theresa A.
Vu, Tuan
Carranza, Michael
Appelbaum, Rachel
Snyder, Madeline
Staffetti, Joseph S.
Allison, Kevin G.
Shimberg, William R.
Louis, Elan D.
Publisher: name: Columbia University
Year: 2014
Subjects: subject: Neurosciences
subject: FOS: Clinical medicine

description: Background
Tremors may be difficult to classify.

Case Report
An 83-year-old male presented with an unusual left wrist tremor. The tremor could be reproducibly elicited by making a fist or carrying a weighted object (e.g., a shopping bag, bottle of water) of approximately 1 lb or more, and it intensified with heavier weights. The tremor was difficult to classify, although it shared features with isometric tremor.

Discussion
This specific presentation of tremor has not been reported previously. We hope that the detailed description we provide will aid other neurologists who encounter this or similar tremors in their clinics.
Double Elementary Goldstone Higgs Boson Production in Future Linear Colliders
Creators: name: Guo, Yu-Chen
name: Yue, Chong-Xing
name: Liu, Zhi-Cheng
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The Elementary Goldstone Higgs (EGH) model is a perturbative extension of the standard model (SM), which identifies the EGH boson as the observed Higgs boson. In this paper, we study pair production of the EGH boson in future linear electron positron colliders. The cross sections in the TeV region can be changed to about $-27\%$, $163\%$ and $-34\%$ for the $e^+e^-\rightarrow Zhh$, $e^+e^-\rightarrow ν\barνhh$, and $e^+e^-\rightarrow t\bar{t}hh$ processes with respect to the SM predictions, respectively. According to the expected measurement precisions, such correction effects might be observed in future linear colliders. In addition, we compare the cross sections of double SM-like Higgs boson production with the predictions in other new physics models.
description: 17 pages, 9 figures
Daidalotarsonemus oliveirai Rezende, Lofego & Ochoa 2015
Creators: name: Rezende, José Marcos
name: Bauchan, Gary
name: Lin, Jian-Zhen
name: Ochoa, Ronald
name: Lofego, Antonio Carlos
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Prostigmata
Tarsonemidae
Daidalotarsonemus
Daidalotarsonemus oliveirai

description: Daidalotarsonemus oliveirai Rezende, Lofego & Ochoa, 2015
(Figs. 83–88)
 Daidalotarsonemus oliveirai Rezende et al., 2015a: 3; Sousa et al., 2018: 70; Di Palma et al., 2021: 2.
 Diagnosis. Adults: Gnathosoma: Palpal length about 1/4 length of gnathosoma. Female: Dorsum: Coarse ornamentation on prodorsum. Tergite C with a W-shaped reticulate pattern medially, and longitudinal uninterrupted depressions laterally. Tergite D with coarse sculpturing. Setae v1, sc2, c2 and h unmodified in shape. Setae c1 stiffer. Setae v1 shorter than sc2 (~ 23 and ~ 28, respectively). Setae c1 and c2 similar in length (~ 11), both shorter than h (~ 24). Setae c1 inserted near midlength of tergite C. Setae d, e and f leaf-shaped. Setae d unique in shape (elongate-lanceolate), width (~ 6), and longer than e and f (~ 33). Setae e unique in shape (elliptical), width (~ 15), and length (~ 33). Setae f unique in shape (lanceolate with two lateral veins), width (~ 7), and length (~ 24). Setae f ~10 distant from each other, on cylindrical tubercles. Venter: Tegula truncate, slightly arched posteriorly. All apodemes distinct. Apodemes 2 fused to prosternal apodeme. Poststernal apodeme bifurcated anteriorly. Legs: sensory cluster of tibiotarsus I complete. Seta tc” of tarsus II distinctly serrate and robust. Male: Dorsum: Setae v1 longer than sc2 (~ 30 and ~ 24, respectively), latter same length as v2. Setae sc1 slightly longer than v1 (~ 38). Setae c1 slightly shorter than c2 (~ 21 and ~ 26, respectively) both shorter than d (~ 32). Setae f shorter than all opisthosomal setae (~ 14). Venter: Apodemes 5 distinct at posterior end of poststernal apodeme. Legs: Sensory cluster of tibiotarsus I complete. Solenidion ω of tarsus II length 4. On femorogenu IV, seta v’ G around two times longer than v’ F (~ 17 and ~ 9, respectively). On tibia IV, seta v’ Ti slightly longer than tibia IV itself (~ 28 and ~ 24, respectively). Larva: unknown.
 Type material deposition: holotype ♀, allotype ♂, seven paratypes ♀ and two paratypes ♂ deposited at DZSJRP; two paratypes ♀ at USNM.
 Locality: Previous Records: 14°47′45”S 39°10′18”W, Ilhéus, State of Bahia, Brazil (Rezende et al. 2015b — type series locality); 14°47′47”S 39°10′15”W, Ilhéus, State of Bahia, Brazil (Sousa et al. 2018). New Records: Hevea brasiliensis (Euphorbiaceae), Igrapiúna, State of Bahia, Brazil.
description: Published as part of Rezende, José Marcos, Bauchan, Gary, Lin, Jian-Zhen, Ochoa, Ronald & Lofego, Antonio Carlos, 2024, Review of the genus Daidalotarsonemus De Leon (Acari: Prostigmata: Tarsonemidae), pp. 1-170 in Zootaxa 5426 (1) on page 107, DOI: 10.11646/zootaxa.5426.1.1, http://zenodo.org/record/10840715
Blepharospasm plus Cervical Dystonia with Predominant Anterocollis: A Distinctive Subphenotype of Segmental Craniocervical Dystonia?
Creators: Waln, Olga
LeDoux, Mark S.
Publisher: name: Columbia University
Year: 2011
Subjects: subject: Neurosciences
subject: FOS: Clinical medicine

description: Background: Dystonia of the eyelids often spreads to affect other muscles in the craniocervical region. Certain blepharospasm-plus subphenotypes may be clinically unique. Methods: Seven subjects with the subphenotype of late-onset blepharospasm with apraxia of eyelid opening and cervical dystonia with predominant anterocollis were identified from a database of over 1800 patients with primary dystonia. Results: Blepharospasm was the first affected site in 6/7 subjects, followed by spread of the disease to the cervical muscles. Although four patients also had other forms of dystonia (laryngeal, lower face), none showed spread outside the craniocervical region. A family history of dystonia was present in 4/7. No mutations were identified in THAP1 or TOR1A. Overall, blepharospasm was difficult to treat, typically requiring both myectomy and substantial doses of botulinum toxin into the pretarsal orbicularis oculi muscles. In one subject, anterocollis markedly improved after deep brain stimulation. Discussion: Delineation and characterization of craniocervical dystonia subphenotypes may serve to guide genetic and therapeutic studies, in addition to clinical interventions. The blepharospasm with apraxia of eyelid opening and anterocollis subphenotype can be therapeutically challenging.
Thoughts on Selected Movement Disorders Terminology and a Plea for Clarity
Creators: Walker, Ruth H.
Publisher: name: Columbia University
Year: 2013
Subjects: subject: Neurosciences
subject: FOS: Clinical medicine

description: Description of the phenomenology of movement disorders requires precise and accurate terminology. Many of the terms that have been widely used in the literature are imprecise and open to interpretation. An examination of these terms and the assumptions implicit in their usage is important to improve communication and hence the definition, diagnosis, and treatment of movement disorders. I recommend that the term dyskinesia should be used primarily in the settings of Parkinson's disease and tardive dyskinesia, in which its clinical implications are relatively clear; it should not be used in other situations where a precise description could more usefully facilitate diagnosis and treatment. In general dyskinesia should be used in the singular form. Extrapyramidal is based upon obsolete anatomical concepts, is uninformative, and should be discarded. The term abnormal involuntary movements (AIMs) is similarly vague and uninformative, although is unlikely to be eliminated from the psychiatric literature. Movement disorder neurologists as teachers, clinicians, article reviewers, and journal editors have the responsibility to educate our colleagues regarding appropriate usage and the importance of employing correct descriptors.
Goldfishing by gauge theory
Creators: name: Calogero, F.
name: Langmann, E.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Mathematical Physics (math-ph)
subject: Exactly Solvable and Integrable Systems (nlin.SI)
subject: FOS: Physical sciences
subject: 37J35, 70H06, 11D99

description: A new solvable many-body problem of goldfish type is identified and used to revisit the connection among two different approaches to solvable dynamical systems. An isochronous variant of this model is identified and investigated. Alternative versions of these models are presented. The behavior of the alternative isochronous model near its equilibrium configurations is investigated, and a remarkable Diophantine result, as well as related Diophantine conjectures, are thereby obtained.
description: 22 pages
Granular Fluids with Solid Friction and Heating
Creators: name: Das, Prasenjit
name: Puri, Sanjay
name: Schwartz, Moshe
Publisher: name: arXiv
Year: 2017
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We perform large-scale molecular dynamics simulations to study heated granular fluids in three dimensions. Granular particles dissipate their kinetic energy due to solid frictional interaction with other particles. The velocity of each particle is perturbed by a uniformly-distributed random noise, which mimics the heating. At the early stage of evolution, the kinetic energy of the system decays with time and reaches a steady state at a later stage. The velocity distribution in the steady state shows a non-Gaussian distribution. This has been characterized by using the Sonine polynomial expansion for a wide range of densities. Particles show diffusive motion for densities below the jamming density $ϕ_{\rm J}$
description: 28 Pages, 8 Figures
Additional file 1 of Virtual practice facilitation as an implementation strategy for launching opioid safety committees for quality improvement in primary care: feasibility, acceptability, and intervention fidelity
Creators: name: Mogk, Jessica
name: Allen, Claire L.
name: Levitz, Carly E.
name: Stefanik-Guizlo, Kelsey
name: Bourcier, Emily
name: Trapp Petty, Melissa
name: Lozano, Paula
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Pharmacology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences

description: Supplementary Material 1
Further Evidence for Celiac Disease-associated Chorea?
Creators: Walker, Ruth H.
Publisher: name: Columbia University
Year: 2011
Subjects: subject: Neurosciences
subject: FOS: Clinical medicine

description: Background: A number of neurological conditions have been reported to be associated with gluten sensitivity, including ataxia, peripheral neuropathy, epilepsy, and occasionally, chorea. The pathogenic role of anti-gliadin antibodies has been questioned, and pathophysiology remains controversial. Case Report: I report chorea in a patient with celiac disease, which responded to a gluten-restricted diet. The response of the movement disorder to change in diet strongly suggests a functional role for anti-gliadin antibodies in the generation of chorea, probably involving basal ganglia targets. Discussion: Gluten sensitivity may be a treatable cause of chorea.
Lecture notes on Diagrammatic Monte Carlo for the Fröhlich polaron
Creators: name: Greitemann, Jonas
name: Pollet, Lode
Publisher: name: arXiv
Year: 2017
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: These notes are intended as a detailed discussion on how to implement the diagrammatic Monte Carlo method for a physical system which is technically simple and where it works extremely well, namely the Fröhlich polaron problem. Sampling schemes for the Green function as well as the self-energy in the bare and skeleton (bold) expansion are disclosed in full detail. We discuss the Monte Carlo updates, possible implementations in terms of common data structures, as well as techniques on how to perform the Fourier transforms for functions with discontinuities. Control over the variety of parameters, especially in the bold scheme, is demonstrated. Sample codes are made available online along with extensive documentation. Towards the end, we discuss various extensions of the method and their applications. After working through these notes, the reader will be well equipped to explore the richness of the diagrammatic Monte Carlo method for quantum many-body systems.
description: 42 pages, 24 figures; Submission to SciPost (revised)
Comment les énergies renouvelables sont liées aux émissions de CO2 au Maroc entre 1990 et 2021 : une investigation empirique
Creators: name: Abdelaziz AGUILAL
name: Benaceur OUTTAJ
Publisher: name: Zenodo
Year: 2024

description: Ces derniers années le Maroc a connu une croissance économique et démographique substantielle. Malgré des niveaux relativement bas des quantités des gaz à effet de serre(GES) émises, le pays reste vulnérable aux effets néfastes du changement climatique face à des difficultés croissantes liées à ses ressources naturelles. En réponse à ce risque, le Maroc a lancé d'importantes décisions ciblant à faire face au changement climatique et a développé des stratégies sectorielles diverses pour intégrer les considérations environnementales dans plusieurs secteurs tels que l'énergie, le transport, l'agriculture et le tourisme. Cela implique un accent stratégique sur l'adoption d'énergies renouvelables en tant que catalyseur principal pour atténuer les émissions de CO2, le principal GES.

Le but de ce papier est d’étudier l’impact de la quantité des énergies renouvelables consommée (RE) sur les émissions de dioxyde de carbone (CO2) au Maroc entre 1990 et 2021. Le test de causalité de Toda-Yamamoto est appliqué afin de mettre en lumière le lien dynamique entre les deux variables. Une corrélation neutre est détectée empiriquement, suggérant que l'énergie renouvelable n'a pas encore atteint l'autonomie nécessaire pour réduire indépendamment les émissions. Cette déviation des attentes hypothétiques conventionnelles souligne la nécessité d'une compréhension nuancée des mécanismes complexes liant les deux variables étudiées. Les résultats de cette recherche ont des implications substantielles pour les décideurs politiques et les économistes, offrant une perspective critique pour réévaluer les politiques existantes et explorer des voies alternatives par lesquelles les énergies renouvelables peuvent efficacement réduire les quantités de CO2 émises au Maroc.  Cette étude peut contribuer au discours sur le développement durable de l'énergie, mettant en évidence l'importance de politiques bien fondées qui tiennent compte des dynamiques multifacettes entre l'intégration des énergies renouvelables et les niveaux d'émissions de CO2.
Additional file 6 of Association between delay in intensive care unit admission and the host response in patients with community-acquired pneumonia
Creators: name: Pereverzeva, Liza
name: Uhel, Fabrice
name: Peters Sengers, Hessel
name: Cremer, Olaf L.
name: Schultz, Marcus J.
name: Bonten, Marc M. J.
name: Scicluna, Brendon P.
name: van der Poll, Tom
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Physiology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mental Health

description: Additional file 6: Figure S2. Leukocyte genomic responses in patients with community-acquired pneumonia with direct or delayed admission to the intensive care unit, all immunocompromised patients excluded.
Flavours and Infra-red Instability in Holography
Creators: name: Kundu, Arnab
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Within a phenomenological holographic model in $(4+1)$-bulk dimensions, defined by Einstein-gravity with a negative cosmological constant, coupled to a Dirac-Born-Infeld and a Chern-Simons term, we explore the fate of BF-bound violation for a probe scalar field and a fluctuation mode of the corresponding geometry. We assume this simple model to capture the dynamics of a strongly coupled SU$(N_c)$ gauge theory with $N_f$ fundamental matter, which in the limit ${\cal O} \left( N_c \right) \sim {\cal O}\left(N_f\right)$ and with a non-vanishing matter density, is holographically described by an AdS$_2$-geometry in the IR. We demonstrate that, superconductor/superfluid instabilities are facilitated and spontaneous breaking of translational invariance is inhibited with increasing values of $\left(N_f / N_c \right) $. This is similar, in spirit, with known results in large $N_c$ Quantum Chromodynamics with $N_f$ quarks and a non-vanishing density, in which the chiral density wave phase becomes suppressed and superconducting instabilities become favoured as the number of quarks is increased.
description: 24 pages, 2 figures
Paroxysmal Kinesigenic Dyskinesia-like Symptoms in a Patient with Tourette Syndrome
Creators: Oyama, Genko
Okun, Michael S.
Ashizawa, Tetsuo
Malaty, Irene A.
Publisher: name: Columbia University
Year: 2011
Subjects: subject: Neurosciences
subject: FOS: Clinical medicine

description: Background: Paroxysmal kinesigenic dyskinesia (PKD) is characterized by episodic dystonia or choreiform movements provoked by sudden voluntary movement. PKD is not commonly reported in Tourette syndrome (TS). We describe a unique case of TS with PKD-like episodic dyskinesia that responded to carbamazepine. Case Report: A 36-year-old male with long-standing TS developed paroxysmal "cramping". Attacks were provoked by quick, sudden arm movements, which induced dystonic cramping, or by reaching overhead, which caused painful contraction of truncal muscles. The spells typically lasted 5-20 seconds and occurred multiple times daily. The patient‘s mother suffered from intermittent dystonic toe curling. In view of the similarity of symptoms to PKD, carbamazepine was prescribed at 400 mg daily. The symptoms resolved completely. Inadvertent discontinuation led to relapse, and resumption led to recapture of benefit. Discussion: This case demonstrates the possibility that PKD-like symptoms may co-occur with TS and may be responsive to carbamazepine.
Prospective Study Evaluating IncobotulinumtoxinA for Cervical Dystonia or Blepharospasm: Interim Results from the First 145 Subjects with Cervical Dystonia
Creators: Fernandez, Hubert H.
Pagan, Fernando
Danisi, Fabio
Greeley, David
Jankovic, Joseph
Verma, Amit
Sethi, Kapil
Pappert, Eric J.
XCiDaBLE Study Group
Publisher: name: Columbia University
Year: 2013
Subjects: subject: Neurosciences
subject: FOS: Clinical medicine
subject: Drugs
subject: Medicine

description: Background: We report the interim results from XCiDaBLE: A large prospective, observational "naturalistic" study evaluating Xeomin® (incobotulinumtoxinA) for cervical dystonia or blepharospasm in the United States.
Methods: Subjects with CD are followed for 2 treatment cycles and monitored via Interactive Voice/Web Response. Subject-reported scales include the Subject Global Impression-Severity and Improvement; Cervical Dystonia Impact Profile (CDIP-58); and Work Productivity and Quality of Life (QoL) are assessed by means of an employment questionnaire and work history and the SF-12v2.
Results: This ongoing study includes 145 subjects with a diagnosis of CD. The majority were female (82.3%) and White (91.0%) and had previously been treated with botulinum toxins (77.2%). There were 106 employed at the time of onset of the disease, but 12.6 years later only 44% were still employed at the time of enrolment into the study and 20% were either receiving or seeking disability benefits. However, only 44% were still employed at the time of recruitment for study participation. The mean total dose/treatment of CD was 225.2 units for the 1st injection. The CDIP-58 total score was significantly improved at four weeks post the first injection compared to baseline (p less than or equal to 0.0001). Most subjects noted improvement in their global impression assessment. No new or unexpected adverse events occurred.
Discussion: The results from these interim analyses confirm previous controlled single-dose studies of incobotulinumtoxinA in terms of efficacy and safety.
How to Differentiate Collective Variables in Free Energy Codes: Computer-Algebra Code Generation and Automatic Differentiation
Creators: name: Giorgino, Toni
Publisher: name: arXiv
Year: 2017
Subjects: subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences

description: The proper choice of collective variables (CVs) is central to biased-sampling free energy reconstruction methods in molecular dynamics simulations. The PLUMED 2 library, for instance, provides several sophisticated CV choices, implemented in a C++ framework; however, developing new CVs is still time consuming due to the need to provide code for the analytical derivatives of all functions with respect to atomic coordinates. We present two solutions to this problem, namely (a) symbolic differentiation and code generation, and (b) automatic code differentiation, in both cases leveraging open-source libraries (SymPy and Stan Math respectively). The two approaches are demonstrated and discussed in detail implementing a realistic example CV, the local radius of curvature of a polymer. Users may use the code as a template to streamline the implementation of their own CVs using high-level constructs and automatic gradient computation.
description: Title changed with respect to the initial submission
High Performance Computing for High Luminosity LHC
Creators: name: Girone, Maria
Publisher: name: Zenodo
Year: 2019

description: High Performance Computing (HPC) centers are the largest facilities available for science. They are centers of expertise for computing scale and local connectivity and represent unique resources. The efficient usage of HPC facilities is critical to the future success of production processing campaigns of all Large Hadron Collider (LHC) experiments. A substantial amount of R&D investigations are being performed in order to harness the power provided by such machines. HPC facilities are early adopters of heterogenous accelerated computing architectures, which represent a challenge and an opportunity. The adoption of accelerated heterogenous architectures has the potential to dramatically increase the performance of specific workflows and algorithms. In this presentation we will discuss R&D work on using alternative architectures both in collaboration with industry through CERN openlab and with the DEEP-EST project, a European consortium to build a prototype modular HPC infrastructure at the exa-scale. We will present the work on a proof-of-concept container platform and batch integration for workload submissions to access HPC testbed resources for data intensive science applications. As strategic computing resources, HPC centers are often isolated with tight network security, which represents a challenge for data delivery and access. We will close by summarizing the requirements and challenges for data access, through the Data Organization Management and Access (DOMA) project of the WLCG. Facilitating data access is critical to the adoption of HPC centers for data intensive science.
Additional file 2 of Virtual practice facilitation as an implementation strategy for launching opioid safety committees for quality improvement in primary care: feasibility, acceptability, and intervention fidelity
Creators: name: Mogk, Jessica
name: Allen, Claire L.
name: Levitz, Carly E.
name: Stefanik-Guizlo, Kelsey
name: Bourcier, Emily
name: Trapp Petty, Melissa
name: Lozano, Paula
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Pharmacology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences

description: Supplementary Material 2
Daidalotarsonemus puntarenensis Rezende, Ochoa & Lofego 2015
Creators: name: Rezende, José Marcos
name: Bauchan, Gary
name: Lin, Jian-Zhen
name: Ochoa, Ronald
name: Lofego, Antonio Carlos
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Prostigmata
Tarsonemidae
Daidalotarsonemus
Daidalotarsonemus puntarenensis

description: Daidalotarsonemus puntarenensis Rezende, Ochoa & Lofego, 2015
(Figs. 92–94)
 Daidalotarsonemus puntarenensis Rezende et al., 2015b: 485.
 Diagnosis. Female: Gnathosoma: Palpal length about 1/5 length of gnathosoma. Dorsum: Reticulate ornamentation present on prodorsum, tergite C and D. Tergite C with four transverse rows of well-defined cells medially, grouped between setae c1 and c2, and different number of distinct cells per row (eight cells for both first and second rows, and six cells for both third and fourth rows). Tergite D with two transverse rows of cells (five and four, respectively), between setae d. Setae sc2 ensiform; h unmodified in shape. Setae v1, c1 and c2 fusiform in shape. Setae v1 about as long as sc2 (~ 30). Setae c1, c2 and h similar in length (~ 15). Setae c1 inserted near posterior border of tergite C. Setae d, e and f leaf-shaped. Setae d and e similar in length (~ 26) and width (~ 4). Setae d unique in shape (ensiform with one central vein). Setae e and f identical in shape (ensiform and scaled). Setae f unique in length (~ 34) and width (~ 6). Setae f ~9 distant from each other, on cylindrical tubercles. Setae h clearly shorter than posterior setae d, e and f (~ 15). Venter: Tegula distinctly rounded. Apodemes distinct, except for prosternal apodeme from level of apodemes 2 to sejugal apodeme. Apodemes 2 not fused to prosternal apodeme. Poststernal apodeme bifurcated anteriorly. Fissures laterad trochanters III, diagonally positioned from anterior end of apodemes 4 to posterior margin of metapodosomal ventral plate. Legs: sensory cluster of tibiotarsus I complete. Seta tc” of tarsus II and l’ of tibia III serrate. Male & larva: unknown.
 Type material deposition: holotype ♀ deposited at NMCR; three paratypes ♀ at USNM.
 Locality: Quepos, Puntarenas Province, Costa Rica (Rezende et al. 2015b).
description: Published as part of Rezende, José Marcos, Bauchan, Gary, Lin, Jian-Zhen, Ochoa, Ronald & Lofego, Antonio Carlos, 2024, Review of the genus Daidalotarsonemus De Leon (Acari: Prostigmata: Tarsonemidae), pp. 1-170 in Zootaxa 5426 (1) on page 111, DOI: 10.11646/zootaxa.5426.1.1, http://zenodo.org/record/10840715
Thalamic Deep Brain Stimulation for Orthostatic Tremor
Creators: Yaltho, Toby C.
Ondo, William G.
Publisher: name: Columbia University
Year: 2011
Subjects: subject: Neurosciences
subject: FOS: Clinical medicine

description: Background: Orthostatic tremor is an uncommon disorder manifest by high frequency, low amplitude leg tremor upon weight bearing. Treatment with oral tremor agents is inconsistent and usually not satisfactory. Methods: We implanted bilateral ventralis intermedius nuclei deep brain stimulators into an 82-year-old male with refractory orthostatic tremor. Results: The patient had a marked subjective and objective improvement in leg and arm tremor, mainly manifested by an improved ability to stand. Discussion: Bilateral thalamic deep brain stimulation may be considered in refractory cases of orthostatic tremor.