cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Myxicola Koch
Creators: name: Darbyshire, Teresa
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Annelida
Polychaeta
Sabellida
Sabellidae
Myxicola

description: Genus Myxicola Koch in Renier, 1847
Type species
Amphitrite infundibulum Montagu, 1808.
Diagnosis (modified from Capa et al. 2019)
Medium- to large-sized sabellids, with variable number of pairs of radioles in semicircular radiolar lobes, each radiole with two rows of vacuolated cells. Basal membrane and radiolar flanges present, basal flanges absent; radiolar eyes present or absent. Dorsal lips with radiolar appendages, pinnular appendages absent; ventral radiolar appendages present or absent, ventral lips developed, extending dorso-ventrally along inner surface of base of radiolar lobes; parallel lamellae and ventral sacs absent. Anterior peristomial ring with narrow ventral lobe. Posterior peristomial ring collar absent. Peristomial vascular loops absent. Peristomial eyespots absent. Thorax with up to eight chaetigers, abdomen with variable number. Glandular ridge on chaetiger 2 present. Ventral shields absent. Interramal eyespots may be present. Thoracic notochaetae and abdominal neurochaetae in irregular bundles, arranged in low, circular tori, groups within fascicles not differentiated. Thoracic uncini acicular, with similarly sized teeth above main fang on transverse rows, hood absent, long handle; neuropodial companion chaetae absent. Abdominal notopodial tori forming almost complete cinctures around body (feature unique among sabellids); uncini avicular, handle absent, breast developed and several rows of shorter teeth above main fang. Abdominal neurochaetae elongate, narrowly hooded. Pygidial eyespots present or absent. Pygidial cirrus absent.
description: Published as part of Darbyshire, Teresa, 2023, Designation of a neotype for Myxicola infundibulum (Montagu, 1808) (Annelida: Sabellidae) and a new species from the UK, pp. 106-137 in European Journal of Taxonomy 900 (1) on page 115, DOI: 10.5852/ejt.2023.900.2305, http://zenodo.org/record/10072637
Polypedilum nahukuwa Bidawid & Fittkau 1995
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum nahukuwa

description: nahukuwa Bidawid & Fittkau, 1995: Entomofauna, 16: 518 (Polypedilum (Tripodura )).
Type locality. Brazil (Sierra Tumucumaque, Igarapé Okueima).
Distribution. NT: Brazil (Pará, Amazonas).
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 45, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Comparison of accuracy and density of static and mobile laser scanners
Creators: name: Trzeciak, Maciej Piotr
name: Brilakis, Ioannis
Publisher: name: University College Dublin
Year: 2021

description: We test the accuracy and density of mobile lidar-based scanners and compare them with the performance of a static scanner. This is achieved by systematically scanning a rectangular target at a growing distance, collating the statistics of the scans and comparing them. This study shows that the accuracy of the scans outputted by the static scanner is about 20 times better at 5 meters than those produced by the mobile devices and this gap further increases along with the distance. The density, measured in points per second, drops along with the distance for all the tested devices, with mobile scanners outperforming their static counterparts.
Reinforcement Learning for Data-Driven Workflows in Radio Interferometry. I. Principal Demonstration in Calibration
Creators: name: Kirk, Brian M.
name: Rau, Urvashi
name: Ramyaa, Ramyaa
Publisher: name: arXiv
Year: 2024
Subjects: subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: Machine Learning (cs.LG)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: Radio interferometry is an observational technique used to study astrophysical phenomena. Data gathered by an interferometer requires substantial processing before astronomers can extract the scientific information from it. Data processing consists of a sequence of calibration and analysis procedures where choices must be made about the sequence of procedures as well as the specific configuration of the procedure itself. These choices are typically based on a combination of measurable data characteristics, an understanding of the instrument itself, an appreciation of the trade-offs between compute cost and accuracy, and a learned understanding of what is considered "best practice". A metric of absolute correctness is not always available and validity is often subject to human judgment. The underlying principles and software configurations to discern a reasonable workflow for a given dataset is the subject of training workshops for students and scientists. Our goal is to use objective metrics that quantify best practice, and numerically map out the decision space with respect to our metrics. With these objective metrics we demonstrate an automated, data-driven, decision system that is capable of sequencing the optimal action(s) for processing interferometric data. This paper introduces a simplified description of the principles behind interferometry and the procedures required for data processing. We highlight the issues with current automation approaches and propose our ideas for solving these bottlenecks. A prototype is demonstrated and the results are discussed.
description: 22 pages, 13 figures; accepted for publication in The Astronomical Journal October 18, 2024
Polypedilum napahaiense Zhang, Song, Qi & Wang, 2016, sp. n.
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum napahaiense

description: napahaiense sp. n.
Type locality. China, Yunnan Province, Zhongdian County, Napahai.
Distribution. OR: China (Yunnan).
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on pages 45-46, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Search for Non-Tensorial Gravitational-Wave Backgrounds in the NANOGrav 15-Year Data Set
Creators: name: Chen, Zu-Cheng
name: Wu, Yu-Mei
name: Bi, Yan-Chen
name: Huang, Qing-Guo
Publisher: name: arXiv
Year: 2023
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The recent detection of a stochastic signal in the NANOGrav 15-year data set has aroused great interest in uncovering its origin. However, the evidence for the Hellings-Downs correlations, a key signature of the gravitational-wave background (GWB) predicted by general relativity, remains inconclusive. In this letter, we search for an isotropic non-tensorial GWB, allowed by general metric theories of gravity, in the NANOGrav 15-year data set. Our analysis reveals a Bayes factor of approximately 2.5, comparing the quadrupolar (tensor transverse, TT) correlations to the scalar transverse (ST) correlations, suggesting that the ST correlations provide a comparable explanation for the observed stochastic signal in the NANOGrav data. We obtain the median and the $90\%$ equal-tail amplitudes as $\mathcal{A}_\mathrm{ST} = 7.8^{+5.1}_{-3.5} \times 10^{-15}$ at the frequency of 1/year. Furthermore, we find that the vector longitudinal (VL) and scalar longitudinal (SL) correlations are weakly and strongly disfavoured by data, respectively, yielding upper limits on the amplitudes: $\mathcal{A}_\mathrm{VL}^{95\%} \lesssim 1.7 \times 10^{-15}$ and $\mathcal{A}_\mathrm{SL}^{95\%} \lesssim 7.4 \times 10^{-17}$. Lastly, we fit the NANOGrav data with the general transverse (GT) correlations parameterized by a free parameter $α$. Our analysis yields $α=1.74^{+1.18}_{-1.41}$, thus excluding both the TT ($α=3$) and ST ($α=0$) models at the $90\%$ confidence level.
description: 9 pages, 4 figures, 3 tables; match the published version
DARI ILMU SAMPAI KEBUTUHAN EKONOMI ; DINAMIKA BUDAYA KEILMUAN PADA MAHASISWA DEWASA INI DALAM KAJIAN ANTROPOLOGI
Creators: name: ahmad, Wilmar Fatiha Ahmad
Publisher: name: Zenodo
Year: 2024

description: Tulisan ini mengangkat tema dinamika budaya keilmuan pada mahasiswa dewasa ini dari sudut pandang antropologi. Budaya keilmuan yang sebelumnya berlangsung murni dalam rangka mencari ilmu dan menemukan kebenaran kini berubah menjadi kegiatan memenuhi kebutuhan ekonomi.
Polypedilum neoperturbans Ree 2009
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum neoperturbans

description: nazarovae Vinogradova, 2008: Spixiana 31(2): 284 (Polypedilum (Tripodura )).
Type locality. Belize, Lake Almond Hill
Distribution. NT: Belize.
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 46, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
title: A Biochemical and Genetic Analysis of the American Shad Alosa Sapidissima Migrating into the Chesapeake Bay
Creators: name: Sismour, Edward Norbert
Publisher: name: Old Dominion University
publisherIdentifier: https://ror.org/04zjtrb98
publisherIdentifierScheme: ROR
Year: 1985

description: Seven enzymes extracted from heart and liver tissues of American shad Alosa sapidissima captured during migrations into the Chesapeake Bay and Nansemond River were electrophoretically surveyed. Malate dehydrogenase and nonspecific esterase displayed polymorphic loci. The esterase polymorphism was used as a biochemical genetic marker to analyze the shad migration through the southern Chesapeake Bay. The genetic composition of the shad migration changed significantly over time indicating that this migration is probably composed of multiple, genetically divergent spawning populations. Results of this study are subject to differing interpretations. Observed temporal heterogeneity may result from separation of northern and James River stocks as the migration proceeds through this region. Alternatively, a differential migration of populations may occur with certain populations entering Chesapeake Bay in advance of other populations. High homozygosity of a collection from the Nansemond River was attributed to sampling a smaller gene pool of individuals that had segregated from the main migration by homing to natal spawning grounds. Evidence is presented to suggest that esterase alleles respond differentially to cold and warm water temperatures, and may influence the timings of shad migrations.
Additional file 6: of Larval application of sodium channel homologous dsRNA restores pyrethroid insecticide susceptibility in a resistant adult mosquito population
Creators: name: Bona, Ana
name: Chitolina, Rodrigo
name: Fermino, Marise
name: Lisiane De Castro Poncio
name: Weiss, Avital
name: JosĂŠ Lima
name: Paldi, Nitzan
name: Bernardes, Emerson
name: Henen, Jonathan
name: Maori, Eyal
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Table showing the list of all the transcript variants of VGSC available in the literature. (PDF 168 kb)
D1.1 - Definition of the Gut Glycome Map along Health to Inflammation Transition
Creators: name: Leiden University Medical Center
name: i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto
Publisher: name: Zenodo
Year: 2024
Subjects: Gut
Glycome
Health-to-inflammation Transition
GlycanTrigger

description: The Deliverable 1.1 reports on the results obtained within Work Package 1 (WP1) of the GlycanTrigger project, specifically addressing Tasks 1.1 and 1.2. These tasks explore the molecular changes in the gut glycome composition during the transition from health to inflammation in CD. Using mass spectrometry imaging (MALDI-MSI) and transcriptome analysis on colonic tissue from CD patients who underwent ileocecal surgical resection and ileocolonic anastomosis, mimicking a reset of the disease and health to inflammation transition, we identified significant changes in mucosa glycome composition. Patients who relapsed upon six months after surgery, and thus reinitiating the inflammatory process, exhibited increased GlycanA and decreased GlycanB in recurrent inflamed mucosa, suggesting that these changes may trigger or contribute to inflammation. To further investigate the relationship between glycosylation changes and local immune responses a CyTOF-Lec panel has been designed and optimized. Though preliminary, our findings highlight the importance of glycan alterations in the pathogenesis of CD.
Additional file 6: Figure S3. of Exploiting single-cell expression to characterize co-expression replicability
Creators: name: Crow, Megan
name: Anirban Paul
name: Ballouz, Sara
name: Z. Huang
name: Gillis, Jesse
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Co-expression performance and sequencing depth. (PDF 670 kb)
Perspectives on epitaxial InGaP for quantum and nonlinear optics
Creators: name: Akin, Joshua
name: Zhao, Yunlei
name: Haque, A. K. M. Naziul
name: Fang, Kejie
Publisher: name: arXiv
Year: 2024
Subjects: subject: Optics (physics.optics)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Nonlinear optical materials are essential for the development of both nonlinear and quantum optics and have advanced recently from bulk crystals to integrated material platforms. In this Perspective, we provide an overview of the emerging InGaP $χ^{(2)}$ nonlinear integrated photonics platform and its experimental achievements. With its exceptional $χ^{(2)}$ nonlinearity and low optical losses, the epitaxial InGaP platform significantly enhances a wide range of second-order nonlinear optical effects, from second-harmonic generation to entangled photon pair sources, achieving efficiencies several orders of magnitude beyond the current state of the art. Moreover, the InGaP platform enables quantum nonlinear optics at the few- and single-photon levels via passive nonlinearities, which has broad implications for quantum information processing and quantum networking. We also examine the current limitations of the InGaP platform and propose potential solutions to fully unlock its capabilities.
Automated Defect Detection For Masonry Arch Bridges
Creators: name: Brackenbury, D
name: Brilakis, I
name: DeJong, M
Publisher: name: ICE Publishing
Year: 2019

description: The condition of masonry arch bridges is predominantly monitored with manual visual inspection. This process has been found to be subjective, relying on an inspection engineer’s interpretation of the condition of the structure. This paper initially presents a workflow that has been developed that can be used by a future automated bridge monitoring system to determine underlying faults in a bridge and suggest appropriate remedial action based on a set of detectable symptoms. This workflow has been used to identify the main classes of defects that an automated visual detection system for masonry should be capable of detecting. Subsequently, a convolutional neural network is used to classify these identified defect classes from images of masonry. As the mortar joints in the masonry are more distinctive than the defects being sought, their effect on the performance of an automated defect classifier is investigated. Compared to classifying all the regions of the masonry with a single classifier, it is found that where the mortar and brick regions have been classified separately, defect and defect free areas of the masonry have been predicted both with more confidence and with better accuracy.
Polypedilum neoperturbans Ree 2009
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum neoperturbans

description: neoperturbans Ree, 2009: Korean Journal of Systematic Zoology, 25(3): 247 (Polypedilum).
Type locality. Korea, Gure-eup, Gure-gun, Jeollanam-do.
Distribution. PA: Korea.
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 46, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Additional file 3: of Implementation of the Tobacco Tactics intervention versus usual care in Trinity Health community hospitals
Creators: name: Duffy, Sonia
name: Ronis, David
name: Ewing, Lee
name: Waltje, Andrea
name: Hall, Stephanie
name: Thomas, Patricia
name: Olree, Christine
name: Maguire, Kimberly
name: Friedman, Lisa
name: Klotz, Sue
name: Jordan, Neil
name: Landstrom, Gay
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Cancer

description: Nurse interview guide. (DOCX 17Â kb)
Isolapotamon undetermined
Creators: name: Guinot, Danièle
name: Rodríguez Moreno, Paula A.
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Decapoda
Potamidae
Isolapotamon
Isolapotamon undetermined

description: Isolapotamon spp.
(Fig. 7A, B)
Material examined. 1 juvenile female 7.8 × 8.9 mm, Lubang Tebot Cave, Merabu karst, East Kalimantan, Borneo, 1°34’58”N, 117°21’07”E, 360 m, 09 August 2010, MZB Cru 5711.
Remarks. In the Lubang Tebot Cave, Kalimantan (East Kalimantan), Borneo, located a little further south on the karst of Merabu than Lubang Gedung (Fig. 1B), two species were collected: one is a potamid, the other is a gecarcinucid (see below, under gecarcinucid sp.). The potamid, an early juvenile female (Fig. 7B), is short-legged: it belongs to the genus Isolapotamon (Bott 1968; Ng 1987; Ng & Tan 1998; Grinang et al. 2018). Its small size does not allow a specific identification (P.K.L. Ng, pers. comm.).
The Lubang Bayan Cave, located very close to the village of Merapun, Borneo (Fig. 1B), 01°28’56”N, 117°11’32”E, is home to a rich and varied fauna, including a species of crab. This crab (Fig. 7A) was photographed in situ in the river eating a fish (possibly a cyprinid; P.K.L. Ng, pers. comm.), but was not collected. It is an unmodified species of Isolapotamon and likely a trogloxene (see Fig. 7A showing the eyes with pigmented cornea and relatively stout ambulatory legs). This report on predation of an entire and rather large riverine fish by the potamid is interesting. Cave environments have been assumed to be predator-free sanctuaries for cave fishes by Romero & Green (2005), but the study of Klaus & Plath (2011) on the freshwater crab Avotrichodactylus bidens (Bott, 1969) in a sulfidic southern Mexican cave shows that it preys on cave-dwelling fish and thus may be one of the top predators in this subterranean habitat. The case here is very different since both crab and fish are trogloxenes. Freshwater epigean crab predation on fish is known from ancient times to the present day but it is focused on Potamon species, so our knowledge on the diet of other freshwater cave crabs is still poor.
description: Published as part of Guinot, Danièle & Rodríguez Moreno, Paula A., 2024, Ngan mayla gen. et sp. nov, a new blind potamid cave crab from Borneo, Kalimantan (Crustacea: Decapoda: Brachyura: Potamoidea, Potamidae), and three other unidentified cave crabs from the same region, pp. 115-137 in Zootaxa 5476 (1) on pages 125-126, DOI: 10.11646/zootaxa.5476.1.13, http://zenodo.org/record/12731227
Additional file 7: Figure S4. of Exploiting single-cell expression to characterize co-expression replicability
Creators: name: Crow, Megan
name: Anirban Paul
name: Ballouz, Sara
name: Z. Huang
name: Gillis, Jesse
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Expression level dependency is variable in individual single cell networks. (PDF 475 kb)
Polypedilum nigribasale Tokunaga 1964
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum nigribasale

description: nigribasale (Tokunaga, 1964): Insects of Micronesia, 590 (Polypedilum (Polypedilum )).
Type locality. Micronesia (Dugor, Weloy, Yap Island).
Distribution. OC: Caroline Is. (Palau, Yap, Ponape).
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 46, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Additional file 9: of Larval application of sodium channel homologous dsRNA restores pyrethroid insecticide susceptibility in a resistant adult mosquito population
Creators: name: Bona, Ana
name: Chitolina, Rodrigo
name: Fermino, Marise
name: Lisiane De Castro Poncio
name: Weiss, Avital
name: JosĂŠ Lima
name: Paldi, Nitzan
name: Bernardes, Emerson
name: Henen, Jonathan
name: Maori, Eyal
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Plant Biology

description: Table showing the list and hotspot sequences for siRNA in VGSC gene, using the I-Score Designer software. (PDF 218 kb)
Polypedilum nudiprostatum Zhang, Wang & Saether 2006
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum nudiprostatum

description: nudiprostatum Zhang, Wang & Saether, 2006: Zootaxa, 1282: 43 (Polypedilum (Tripodura )).
Type locality. China, Guangxi Autonomous Region, Longsheng County, SanmenTown.
Distribution. OR: China (Guangxi, Fujian).
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 46, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Investigating peer recognition across an introductory physics sequence: Do first impressions last?
Creators: name: Sundstrom, Meagan
name: Kageorge, Logan
Publisher: name: arXiv
Year: 2023
Subjects: subject: Physics Education (physics.ed-ph)
subject: FOS: Physical sciences

description: Students' beliefs about the extent to which meaningful others, including their peers, recognize them as a strong science student are correlated with their persistence in science courses and careers. Yet, prior work has found a gender bias in peer recognition, in which student nominations of strong peers disproportionately favor men over women, in some instructional contexts. Researchers have hypothesized that such a gender bias diminishes over time, as determined by students' academic year: studies have found a gender bias in science courses aimed at first-year students, but not in science courses aimed at beyond first-year students. This hypothesis that patterns of peer recognition change over time, however, has yet to be tested with longitudinal data--previous studies only examine snapshots of different students in different science courses. In this study, we isolate the effect of time on peer recognition by analyzing student nominations of strong peers across a two-semester introductory physics course sequence, containing the same set of students and the same instructor in both semesters, at a mostly-women institution. Using a combination of social network analysis and qualitative methods, we find that while many students receive similar levels of peer recognition over time, the four most highly nominated students--the recognition celebrities--exhibit some change between semesters even in this highly controlled setting. Furthermore, we observe that these changes in the celebrities track closely with changes in student outspokenness and that being outspoken is likely more important for gaining recognition than earning a high grade in the class. These findings lend support to prior work's hypothesis that peer recognition changes over time, but also challenge the generalizability of previous results (i.e., that patterns of recognition are related to students' academic year).
description: Submitted to Physical Review Physics Education Research
Lebertia Neuman 1880
Creators: name: Tuzovskij, Petr V.
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Trombidiformes
Lebertiidae
Lebertia

description: Genus Lebertia Neuman, 1880
Diagnosis. Larva. Dorsal plate broad and bearing four pairs of setae: two pairs simple of setae (Fch, Vi) and two pairs of trichobothria (Fp, Oi); setae Vi are the longest, both pairs of trichobothria short and thin; coxal plates I free or partly fused with coxal plates II+III, suture lines between coxal plates II+III obliterated except laterally; coxal plates I with two setae each (C1, C2); coxal plates II with one single seta (C3); coxal plates III bearing three setae each (C4 anteriorly, Pi posteromedially and Pe posterolaterally); urstigma lateral to the border between coxal plates I and II; excretory pore plate bearing two pairs of setae (Ai, Ae); ten pairs of setae (Oe, Hi, He, Sci, Sce, Li, Le, Si, Se and Ci) located in the soft membranous integument; total number of leg setae, excluding eupathidia, as follows (specialized setae given in parentheses): I–Leg-1–5: 1, 7, 5 (s), 10 (2s), 15 (s, ac); II–Leg-1–5: 1, 7, 5 (s), 11 (2s), 15 (s, ac); III–Leg-1–5: 1, 6, 5 (s), 10 (s), 11–12 (0-1ac).
description: Published as part of Tuzovskij, Petr V., 2016, Larval morphology of Lebertia insignis Neuman, 1880, L. porosa Thor, 1900 and L. saxonica Thor, 1911 (Acari, Hydrachnidia: Lebertiidae), pp. 295-310 in Zootaxa 4121 (3) on page 296, DOI: 10.11646/zootaxa.4121.3.4, http://zenodo.org/record/261168
MOESM4 of Histone modifications rather than the novel regional centromeres of Zymoseptoria tritici distinguish core and accessory chromosomes
Creators: name: Schotanus, Klaas
name: Soyer, Jessica
name: Lanelle Connolly
name: Grandaubert, Jonathan
name: Happel, Petra
name: Smith, Kristina
name: Freitag, Michael
name: Stukenbrock, Eva
Publisher: name: Figshare
Year: 2015
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 4: Figure S3. Centromere view with centromeric position and histone modifications for all chromosomes. Centromeric regions from Zt121-1 (GFPâ  CenH3 in IPO323Î Chr18) are shown. The ruler indicates the length of the chromosomes. For each chromosome the GC-content (%GC, red), centromeric position (Cen, black), gene density (CDS, blue), and TE content are shown (TE, marine). Enrichment with H3K4me2 (green), H3K9me3 (red) and H3K27me3 (orange) is shown.
Additional file 1: of Implementation of the Tobacco Tactics intervention versus usual care in Trinity Health community hospitals
Creators: name: Duffy, Sonia
name: Ronis, David
name: Ewing, Lee
name: Waltje, Andrea
name: Hall, Stephanie
name: Thomas, Patricia
name: Olree, Christine
name: Maguire, Kimberly
name: Friedman, Lisa
name: Klotz, Sue
name: Jordan, Neil
name: Landstrom, Gay
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer

description: Summary of RE-AIM measures. (DOCX 22Â kb)
Core and Halo Properties in Multi-Field Wave Dark Matter
Creators: name: van Dissel, Fabio
name: Hertzberg, Mark P.
name: Shapiro, Jared
Publisher: name: arXiv
Year: 2023
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: In this work, we compute multi-field core and halo properties in wave Dark Matter models. We focus on the case where Dark Matter consists of two light (real) scalars, interacting gravitationally. As in the single-field Ultra Light Dark Matter (ULDM) case, the scalar field behaves as a coherent BEC with a definite ground state (at fixed total mass), often referred to in the literature as a gravitational soliton. We establish an efficient algorithm to find the ground and excited states of such two-field systems. We then use simulations to investigate the gravitational collapse and virialization, starting from different initial conditions, into solitons and surrounding halo. As in the single-field case, a virialized halo forms with a gravitational soliton (ground state) at the center. We find some evidence for an empirical relation between the soliton mass and energy and those of the host halo. We use this to then find a numerical relation between the properties of the two. Finally, we use this to address the issue of alleviating some of the tensions that single-field ULDM has with observational data, in particular, the issue of how a galaxy's core and radius are related. We find that if galaxies of different masses have similar percentages of the two species, then the core-radius scaling tension is not addressed. However, more general possibilities occur if the relative abundance of species in each halo correlates with the total mass of the galaxy. If this is the case, the model predicts several other phenomenological signatures.
description: 35 pages, 18 figures. V2: added references. V3: Extended and generalized the analysis of section 4
Polypedilum numerus Chaudhuri, Guha & Das Gupta 1981
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum numerus

description: numerus Chaudhuri, Guha & Das Gupta, 1981: Tijdschrift Voor Entomologi, 124:135 (Polypedilum).
Type locality. India (West Bengal, Darjeeling).
Distribution. OR: India.
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 46, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
MOESM1 of The two Rasamsonia emersonii α-glucuronidases, ReGH67 and ReGH115, show a different mode-of-action towards glucuronoxylan and glucuronoxylo-oligosaccharides
Creators: name: Martínez, Patricia
name: Appeldoorn, Maaike
name: Gruppen, Harry
name: Kabel, Mirjam
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Physiology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Cancer
subject: Inorganic Chemistry

description: Additional file 1: Figure S1. pH (A) and temperature profiles (C) of the incubated ReGH67 with the aldouronic acids mixture (AAc) and the pH (B) and temperature profiles (D) of the incubated ReGH115 with beechwood xylan.
PROPERTIES AND MANAGEMENT OF IRRIGATED MEADOW-SAZ SOILS IN CENTRAL FERGANA: ENHANCING SOIL PRODUCTIVITY AND COTTON YIELD
Creators: name: Aktamov, Muhammadno'monjon
Publisher: name: Zenodo
Year: 2024

description: This article examines the properties of irrigated meadow-saz soils in Central Fergana and evaluates strategies to enhance their agricultural productivity. A comprehensive analysis of soil characteristics, including salinity, gypsum content, and mechanical composition, is paired with agrochemical and innovative agronomic practices. Focused on improving cotton yields, the study integrates traditional soil management techniques with non-conventional methods such as foliar feeding and optimized planting densities. Recommendations for sustainable soil use are provided, supported by empirical findings from recent experiments.
Polypedilum obelos Sublette & Sasa 1994
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum obelos

description: obelos Sublette & Sasa, 1994: Spixiana (Supplement), 20: 50 (Polypedilum (Tripodura )).
Type locality. Guatemala (Rincon).
Distribution. NT: Costa Rica, Guatemala.
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 46, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Additional file 1: of Larval application of sodium channel homologous dsRNA restores pyrethroid insecticide susceptibility in a resistant adult mosquito population
Creators: name: Bona, Ana
name: Chitolina, Rodrigo
name: Fermino, Marise
name: Lisiane De Castro Poncio
name: Weiss, Avital
name: JosĂŠ Lima
name: Paldi, Nitzan
name: Bernardes, Emerson
name: Henen, Jonathan
name: Maori, Eyal
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Plant Biology

description: Table showing the list of primers used in Real-time PCR (qPCR) and in dsRNA production. (PDF 197 kb)
Additional file 4: of Larval application of sodium channel homologous dsRNA restores pyrethroid insecticide susceptibility in a resistant adult mosquito population
Creators: name: Bona, Ana
name: Chitolina, Rodrigo
name: Fermino, Marise
name: Lisiane De Castro Poncio
name: Weiss, Avital
name: JosĂŠ Lima
name: Paldi, Nitzan
name: Bernardes, Emerson
name: Henen, Jonathan
name: Maori, Eyal
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Plant Biology

description: Table showing the frequency of the 1016 and 1534 mutations in the sodium channel gene of the Rio de Janeiro strain of A. aegypti. (PDF 86 kb)
Nonvolatile spin field effect transistor based on VSi2N4/Sc2CO2 multiferroic heterostructure
Creators: name: Zhang, Xian
name: Liu, Bang
name: Huang, Junsheng
name: Cao, Xinwei
name: Zhang, Yunzhe
name: Guo, Zhi-Xin
Publisher: name: arXiv
Year: 2023
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: In this study, we present first-principles calculations that introduce a novel nonvolatile spin field-effect transistor (Spin-FET) utilizing a van der Waals multiferroic heterostructure, specifically VSi2N4/Sc2CO2. We demonstrate that inverting the ferroelectric polarization in a Sc2CO2 monolayer can effectively modulate the electronic states of a VSi2N4 monolayer, enabling a transition from half-metal to half-semiconductor. This transition significantly alters the electronic transport properties. Furthermore, we construct a Spin-FET device based on this multiferroic heterostructure and observe that the VSi2N4/Sc2CO2-based Spin-FET exhibits exceptional all-electric-controlled performance. Notably, the inversion of the Sc2CO2 ferroelectric polarization yields a substantial on-off current ratio, approximately 650\%, under a minimal bias voltage of 0.02 V. Additionally, we identify a unique spatially-separated spin-polarized transport phenomenon, wherein pure spin-up electrons transport exclusively through VSi2N4, and spin-down electrons through Sc$_2$CO$_2$. Our findings suggest a promising pathway for developing low-energy-dissipation and nonvolatile FET devices.
description: 5 figures
Linear relations of p-adic periods of 1-motives (thesis)
Creators: name: Mohajer, Mohammadreza
Publisher: name: arXiv
Year: 2024
Subjects: subject: Number Theory (math.NT)
subject: Algebraic Geometry (math.AG)
subject: FOS: Mathematics
subject: 14C30, 11S80, 14F30, 32G20, 14Kxx, 14K20, 14L05, 11G25, 14F42, 14C15

description: In this thesis, we aim to develop p-adic analogs of known results for classical periods, focusing specifically on 1-motives. We establish an integration theory for 1-motives with good reductions, which generalizes the Colmez-Fontaine-Messing p-adic integration for abelian varieties with good reductions. We also compare the integration pairing with other pairings such as those induced by crystalline theory. Additionally, we introduce a formalism for periods and formulate p-adic period conjectures related to p-adic periods arising from this integration pairing. Broadly, our p-adic period conjecture operates at different depths, with each depth revealing distinct relations among the p-adic periods. Notably, the classical period conjecture (Kontsevich-Zanier conjecture over $\bar{\mathbb{Q}}$) for 1-periods fits within our framework, and, according to the classical subgroup theorem of Huber-Wüstholz for 1-motives, the conjecture for classical periods of 1-motives holds true at depth 1. Finally, we identify three $\mathbb{Q}$-structures arising from $\bar{\mathbb{Q}}$-rational points of the formal p-divisible group associated with a 1-motive $M$ with a good reduction at $p$, and we prove p-adic period conjectures at depths 2 and 1, relative to periods induced by the p-adic integration of $M$ and these $\mathbb{Q}$-structures. Our proof involves a p-adic version of the subgroup theorem that we obtain for 1-motives with good reductions.
description: This thesis was submitted by the author in 2024 in partial fulfillment of the requirements for the degree of Ph.D. in Mathematics at the University of Ottawa
A high resolution simulation of protoplanetary disk turbulence driven by the vertical shear instability
Creators: name: Shariff, Karim
name: Umurhan, Orkan M.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences

description: A high resolution fourth-order Padé scheme is used to simulate locally isothermal 3D disk turbulence driven by the vertical shear instability (VSI) using 268.4 M points. In the early non-linear period of axisymmetric VSI, angular momentum transport by vertical jets creates correlated N-shaped radial profiles of perturbation vertical and azimuthal velocity. This implies dominance of positive perturbation vertical vorticity layers and a recently discovered angular momentum staircase with respect to radius ($r$). These features are present in 3D in a weaker form. The 3D flow consists of vertically and azimuthally coherent turbulent shear layers containing small vortices with all three vorticity components active. Previously observed large persistent vortices in the interior of the domain driven by the Rossby wave instability are absent. We speculate that this is due to a weaker angular momentum staircase in 3D in the present simulations compared to a previous simulation. The turbulent viscosity parameter $α(r)$ increases linearly with $r$. At intermediate resolution, the value of $α(r)$ at midradius is close to that of a previous simulation. The specific kinetic energy spectrum with respect to radial wavenumber has a power law region with exponent $-1.84$, close to the value $-2$ expected for shear layers. The spectrum with respect to azimuthal wavenumber has a $-5/3$ region and lacks a $-5$ region reported in an earlier study. Finally, it is found that axisymmetric VSI has artifacts at late times, including a very strong angular momentum staircase, which in 3D is present weakly in the disk's upper layers.
Polypedilum ogoouense Bjorlo 2002
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum ogoouense

description: ogoouense Bjørlo, 2002: Zoologica Scripta, 31 (4): 372 (Polypedilum (Tripodura ))
Type locality. Gabon, Moyen-Ogooué Region, Ndjelé, Auberge St Jean Ogooué River
Distribution. AF: Gabon.
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 46, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Perturbational Decomposition Analysis for Quantum Ising Model with Weak Transverse Fields
Creators: name: Li, Youning
name: Huang, Junfeng
name: Zhang, Chao
name: Li, Jun
Publisher: name: arXiv
Year: 2024
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: This work presented a perturbational decomposition method for simulating quantum evolution under the one-dimensional Ising model with both longitudinal and transverse fields. By treating the transverse field terms as perturbations in the expansion, our approach is particularly effective in systems with moderate longitudinal fields and weak to moderate transverse fields relative to the coupling strength. Through systematic numerical exploration, we characterized parameter regimes and evolution time windows where the decomposition achieved measurable improvements over conventional Trotter decomposition methods. The developed perturbational approach and its characterized parameter space may provide practical guidance for choosing appropriate simulation strategies in different parameter regimes of the one-dimensional Ising model.
description: 10 pages, 7 figures, comments weilcomed
First Detailed Calculation of Atmospheric Neutrino Foregrounds to the Diffuse Supernova Neutrino Background in Super-Kamiokande
Creators: name: Zhou, Bei
name: Beacom, John F.
Publisher: name: arXiv
Year: 2023
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: High Energy Physics - Experiment (hep-ex)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: The Diffuse Supernova Neutrino Background (DSNB) -- a probe of the core-collapse mechanism and the cosmic star-formation history -- has not been detected, but its discovery may be imminent. A significant obstacle for DSNB detection in Super-Kamiokande (Super-K) is detector backgrounds, especially due to atmospheric neutrinos (more precisely, these are foregrounds), which are not sufficiently understood. We perform the first detailed theoretical calculations of these foregrounds in the range 16--90 MeV in detected electron energy, taking into account several physical and detector effects, quantifying uncertainties, and comparing our predictions to the 15.9 livetime years of pre-gadolinium data from Super-K stages I--IV. We show that our modeling reasonably reproduces this low-energy data as well as the usual high-energy atmospheric-neutrino data. To accelerate progress on detecting the DSNB, we outline key actions to be taken in future theoretical and experimental work. In a forthcoming paper, we use our modeling to detail how low-energy atmospheric-neutrino events register in Super-K and suggest new cuts to reduce their impact.
description: Main text 17 pages and 8 figures + appendix. Minor changes; match the published version
Additional file 1: of Health care seeking behaviours in pregnancy in rural Sindh, Pakistan: a qualitative study
Creators: name: Rahat Qureshi
name: Sheikh, Sana
name: Khowaja, Asif
name: Hoodbhoy, Zahra
name: Shujaat Zaidi
name: Sawchuck, Diane
name: Vidler, Marianne
name: Bhutta, Zulfiqar
name: Dadeslzen, Peter Von
Publisher: name: Figshare
Year: 2016
Subjects: subject: Cell Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: Peer review reports. (PDF 616 kb)
Lidar-based Norwegian tree species detection using deep learning
Creators: name: Vermeer, Martijn
name: Hay, Jacob Alexander
name: Völgyes, David
name: Koma, Zsófia
name: Breidenbach, Johannes
name: Fantin, Daniele Stefano Maria
Publisher: name: arXiv
Year: 2023
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Image and Video Processing (eess.IV)
subject: FOS: Computer and information sciences
subject: FOS: Electrical engineering, electronic engineering, information engineering

description: Background: The mapping of tree species within Norwegian forests is a time-consuming process, involving forest associations relying on manual labeling by experts. The process can involve both aerial imagery, personal familiarity, or on-scene references, and remote sensing data. The state-of-the-art methods usually use high resolution aerial imagery with semantic segmentation methods. Methods: We present a deep learning based tree species classification model utilizing only lidar (Light Detection And Ranging) data. The lidar images are segmented into four classes (Norway Spruce, Scots Pine, Birch, background) with a U-Net based network. The model is trained with focal loss over partial weak labels. A major benefit of the approach is that both the lidar imagery and the base map for the labels have free and open access. Results: Our tree species classification model achieves a macro-averaged F1 score of 0.70 on an independent validation with National Forest Inventory (NFI) in-situ sample plots. That is close to, but below the performance of aerial, or aerial and lidar combined models.