cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
The Kinematic and Spectral Ages of the Compact Radio Source CTD 93
Creators: name: Nagai, Hiroshi
name: Inoue, Makoto
name: Asada, Keiichi
name: Kameno, Seiji
name: Doi, Akihiro
Publisher: name: arXiv
Year: 2006
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present a study of the kinematic and spectral ages of the Gigahertz-Peaked Spectrum (GPS) source CTD~93. Measurements of the hot spot separation over 8.5 yr show evidence of an increase. The separation rate along the source axis is 0.34$\pm0.11c$ (H$_{0}$=72 km s$^{-1}$ Mpc$^{-1}$), which results in a kinematic age of 2200$\pm$700 yr. Assuming that two hot spots are moving apart at equal speeds, we derive an advance speed of 0.17$\pm0.06c$. The radio lobe spectra show a high frequency steepening, as expected if energetic electrons lose energy by synchrotron radiation. The spectral break decreases with the distance from the hot spot in the northern component of CTD~93. This tendency is expected from the basic scenario of radio lobe evolution involving particle acceleration at the hot spots, with the radio lobes populated by high energy electrons which have leaked from the hot spots. Although a core-jet morphology for CTD~93 has previously been proposed, these results indicate that the morphology is similar to that of Compact Symmetric Object (CSO). From the spectral fits in the northern component we found a break frequency of 3.7 GHz at the edge of the lobe. The resultant spectral age is $\sim$300 yr assuming the equipartition magnetic field. This requires the advance speed of 0.26$c$, which shows a good agreement of the hot spot motion of 0.17$\pm0.06c$. Our results strongly support the hypothesis that CSOs are young radio sources.
description: 25 pages, 19 figures, accepted for publication in ApJ
Simulation Tools for Detector and Instrument Design
Creators: name: Kanaki, Kalliopi
name: Kittelmann, Thomas
name: Cai, Xiao Xiao
name: Klinkby, Esben
name: Knudsen, Erik B.
name: Willendrup, Peter
name: Hall-Wilton, Richard
Publisher: name: arXiv
Year: 2017
Subjects: subject: Computational Physics (physics.comp-ph)
subject: Instrumentation and Detectors (physics.ins-det)
subject: FOS: Physical sciences

description: The high performance requirements at the European Spallation Source have been driving the technological advances on the neutron detector front. Now more than ever is it important to optimize the design of detectors and instruments, to fully exploit the ESS source brilliance. Most of the simulation tools the neutron scattering community has at their disposal target the instrument optimization until the sample position, with little focus on detectors. The ESS Detector Group has extended the capabilities of existing detector simulation tools to bridge this gap. An extensive software framework has been developed, enabling efficient and collaborative developments of required simulations and analyses -- based on the use of the Geant4 Monte Carlo toolkit, but with extended physics capabilities where relevant (like for Bragg diffraction of thermal neutrons in crystals). Furthermore, the MCPL (Monte Carlo Particle Lists) particle data exchange file format, currently supported for the primary Monte Carlo tools of the community (McStas, Geant4 and MCNP), facilitates the integration of detector simulations with existing simulations of instruments using these software packages. These means offer a powerful set of tools to tailor the detector and instrument design to the instrument application.
Exoplanets as probes of the winds of host stars: the case of the M dwarf GJ 436
Creators: name: Vidotto, A. A.
name: Bourrier, V.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: Winds of cool dwarfs are difficult to observe, with only a few M dwarfs presenting observationally-derived mass-loss rates (Mdot), which span several orders of magnitude. Close-in exoplanets are conveniently positioned in the inner regions of stellar winds and can, thus, be used to probe the otherwise-unobservable local properties of their host-stars' winds. Here, we use local stellar wind characteristics observationally-derived in the studies of atmospheric evaporation of the warm-neptune GJ436 b to derive the global characteristics of the wind of its M-dwarf host. Using an isothermal wind model, we constrain the stellar wind temperature to be in the range [0.36,0.43] MK, with Mdot=[0.5,2.5] x 10^{-15} Msyn/yr. By computing the pressure balance between the stellar wind and the interstellar medium, we derive the size of the astrophere of GJ436 to be around 25 au, significantly more compact than the heliosphere. We demonstrate in this paper that transmission spectroscopy, coupled to planetary atmospheric evaporation and stellar wind models, can be a useful tool for constraining the large-scale wind structure of planet-hosting stars. Extending our approach to future planetary systems discoveries will open new perspectives for the combined characterisation of planetary exospheres and winds of cool dwarf stars.
description: MNRAS in press
The iTHEPHY project and its software platform: enhancing remote teacher-student collaboration
Creators: name: Peco, Gianluca
name: Carbone, Angelo
Publisher: name: Zenodo
Year: 2019

description: iTHEPHY is an ERASMUS+ project which aims at developing innovative student-centered Deeper Learning Approaches (DPA) and Project-Based teaching and learning methodologies for HE students, contributing to increase the internationalization of physics master courses. In this talk we'll introduce the iTHEPHY project status and main goals attained, with a focus on the web-based virtual environment developed in order to support the groups of students and the teams of teachers during their DPA learning and teaching activities: the iTHEPHY DPA Platform. The iTHEPHY DPA platform will be described in detail, focusing on the methodologies and technologies which enabled us to deliver a modular, user friendly, open-source, scalable and reusable platform that can be adopted by other communities in a straightforward way. The presentation will describe the work carried out in order to integrate some well established tools like Moodle, Redmine, BigBlueButton, Rocketchat, Jitsi, Sharelatex and INDIGO-DataCloud IAM. Some aspects about containerization of services in Cloud will be also covered. Finally, some reflections about sustainability of the software platform delivered will be presented.
Additional file 6: of A narrative synthesis of research evidence for tinnitus-related complaints as reported by patients and their significant others
Creators: name: Hall, Deborah
name: Fackrell, Kathryn
name: Li, Anne
name: Thavayogan, Rachel
name: Smith, Sandra
name: Kennedy, Veronica
name: Tinoco, Catarina
name: Rodrigues, Evelina
name: Campelo, Paula
name: TĂ˘Nia Martins
name: LourenĂ§O, Vera
name: Ribeiro, Diogo
name: HaĂşla Haider
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Neuroscience
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Grouping table reporting the different terminology used by authors to describe the same theoretical constructs. Grouping considered the examples and explanations given by the study authors for each domain of tinnitus-related problem (examples not reported here). Domains that could not be coded either because they were not well-defined, described multiple theoretical constructs which did not group together, or described external modulators of the tinnitus were as follows: Ability to mask the tinnitus sound; Aggravated by noise; Auditory perceptual characteristics of tinnitus; Catastrophic; Changes for loud background noise; Changes in perception over time; Effects of tinnitus on health; Effects of tinnitus on the patients social, emotional and physical behaviour; Emotional; Emotional reaction, social activities and communication, and focused attention; Emotions; Factors that aggravate tinnitus; Functional; Functional handicap caused by tinnitus; Illness focusing; Masking effects; Medical interaction; Most problematic situation; Other people; Overall patient stress and severity of tinnitus; Psychological; Relax; Relief from tinnitus; Self-perceived tinnitus handicap; Sensations in the presence of such sounds; Situational difficulties; Situational effects; Stressors associated with onset or exacerbation of tinnitus; The extent of problems due to tinnitus; Tinnitus loudness/strength, annoyance, impact on life and severity; Tinnitus handicap; Tinnitus problem; Tinnitus sensation; Tinnitus severity; Tinnitus burden and severity. (DOCX 18 kb)
title: ADCO, Cartulaire de Cîteaux pour la grange et seigneurie d'Ouges (XVe siècle), Cart. 173 (11 H 939), 226 folios, f. 0151
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2015
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: cartulaire
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge

description: Cartulaire de Cîteaux pour la grange et seigneurie d'Ouges (XVe siècle), Archives départementales de la Côte-d'Or, Cart. 173 (11 H 939), 226 folios, f. 0151, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire de Cîteaux pour la grange et seigneurie d'Ouges (XVe siècle), Archives départementales de la Côte-d'Or, Cart. 173 (11 H 939), 226 folios, f. 0151, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
Supplementary Figure 1. Identification of small molecules regulating PAD2-activated citrullination. from Small molecule activates citrullination through targeting PAD2
Creators: name: Zhang, Xue
name: Shen, Mengzhen
name: Zhu, Huimin
name: Zhang, Junjie
name: Yang, Min
name: Su, Kaiyan
name: Zhang, Yirong
name: Fu, Wei
name: Ke, Xisong
name: Qu, Yi
Publisher: name: The Royal Society
Year: 2023

description: (A) Western blot analysis of histone H3 citrullination level in HepG2 cells transfected with Flag-PAD2 for 48 hours using the indicated antibodies. α-tubulin was used as the loading controls. (B) Western blot analysis of cit-H3 level in HEK293T cells transfected with Flag-PAD2 for 48 hours or small interfering RNA (siRNA) against PAD2 for 72 hours. Flag and GAPDH were used as the controls. (C) Western blot analysis of cit-H3 in HEK293T cells transfected with Flag-PAD2 plasmid for 24 hours, followed by treated with the indicated compounds mixtures (ten-in-one, Tab. S1) for 24 hours (parallel to Fig. 1B). The top groups labeled in red were rolled into the next subdivision. (D) Western blot analysis of cit-H3 in HEK293T cells transfected with Flag-PAD2 plasmid for 24 hours, followed by treated with the indicated compounds (10 μM) for 24 hours (parallel to Fig. 1C). The top five compounds labeled in red were selected for further validation. (E) Western blot analysis of cit-H3 treated with the indicated compounds (10 μM) for 24 hours in a panel of cancer cell lines. GAPDH was used as the loading controls in (C-E).
On the Signal Processing Operations in LIGO signals
Creators: name: Raman, Akhila
Publisher: name: arXiv
Year: 2017
Subjects: subject: Signal Processing (eess.SP)
subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: FOS: Physical sciences

description: This article analyzes the data for the five gravitational wave (GW) events detected in Hanford(H1), Livingston(L1) and Virgo(V1) detectors by the LIGO collaboration. It is shown that GW170814, GW170817, GW151226 and GW170104 are very weak signals whose amplitude does not rise significantly during the GW event, and they are indistinguishable from non-stationary detector noise. LIGO software implements cross-correlation funcion(CCF) of H1/L1 signals with the template reference signal, in frequency domain, in a matched filter, using 32 second windows. It is shown that this matched filter misfires with high SNR/CCF peaks, even for very low-amplitude, short bursts of sine wave signals and additive white gaussian noise(AWGN), all the time. It is shown that this erratic behaviour of the matched filter, is due to the error in signal processing operations, such as lack of cyclic prefix necessary to account for circular convolution. It is also shown that normalized CCF method implemented in time domain using short windows, does not have false CCF peaks for sine wave and noise bursts. It is shown that the normalized CCF for GW151226 and GW170104, when correlating H1/L1 and template, is indistinguishable from correlating detector noise and the template. It is also shown that the normalized CCF for GW151226 and GW170104, when correlating H1/L1 and template, is indistinguishable from correlating H1/L1 and bogus chirp templates which are frequency modulated(FM) waveforms which differ significantly from ideal templates. Similar results are shown with LIGO matched filter, which misfires with high Signal to Noise Ratio(SNR) for bogus chirp templates.
description: Corrected typographical errors, updated names, references and acknowledgement section. Added a subsection on an improved whitening procedure
Impact of Atmospheric Boundary Profiling on Numerical Weather Prediction
Creators: name: Löhnert, Ulrich
name: BARNABA, FRANCESCA
name: BELLINI, ANNACHIARA
name: Brousseau, Pierre
name: Chambon, Philippe
name: Cimini, Domenico
name: Colload Coen, Martine
name: Crezee, Bas
name: Haefele, Alexander
name: Hervo, Maxime
name: Kaufmann, Pirmin
name: Knist, Christine
name: Kotthaus, Simone
name: Leuenberger, Daniel
name: Löffler, Moritz
name: Martinet, Pauline
name: Merker, Claire
name: Nomokonova, Tatiana
name: Regenass, Daniel
name: Schomburg, Annika
name: Schraff, Christoph
name: Stiller, Olaf
name: Guillaume, Thomas
name: Toporov, Maria
name: Vural, Jasmin
Publisher: name: Zenodo
Year: 2024
Subjects: Impact (D1.5)

description: In this chapter we showcase the impact of (Atmospheric Boundary Layer) ABL profiling - mainly, but not exclusively through ground-based remote sensing - for applications in Numerical Weather Prediction (NWP). Besides being proven to operate in a 24/7, unattended manner with suited QA and QC measures, national weather services need to be convinced of the actual benefit of ABL ground- based remote sensing in NWP. For this, we highlight some of the latest results in the areas of model evaluation and short-term forecasting with focus on the dynamic and thermodynamic structure of the ABL.
Additional file 3 of Preclinical studies and transcriptome analysis in a model of Parkinson’s disease with dopaminergic ZNF746 expression
Creators: name: Kim, Ji Hun
name: Yang, Sumin
name: Kim, Hyojung
name: Vo, Dang-Khoa
name: Maeng, Han-Joo
name: Jo, Areum
name: Shin, Joo-Heon
name: Shin, Joo-Ho
name: Baek, Hyeon-Man
name: Lee, Gum Hwa
name: Kim, Sung-Hyun
name: Lim, Key-Hwan
name: Dawson, Valina L.
name: Dawson, Ted M.
name: Joo, Jae-Yeol
name: Lee, Yunjong
Publisher: name: figshare
Year: 2025
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 3.
Localization on a quantum graph with a random potential on the edges
Creators: name: Exner, Pavel
name: Helm, Mario
name: Stollmann, Peter
Publisher: name: arXiv
Year: 2006
Subjects: subject: Mathematical Physics (math-ph)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Spectral Theory (math.SP)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences
subject: FOS: Mathematics
subject: 81Q10, 81V99, 47E05

description: We prove spectral and dynamical localization on a cubic-lattice quantum graph with a random potential. We use multiscale analysis and show how to obtain the necessary estimates in analogy to the well-studied case of random Schroedinger operators.
description: LaTeX2e, 18 pages
Additional file 8: of A methodology to extract outcomes from routine healthcare data for patients with locally advanced non-small cell lung cancer
Creators: name: Swee-Ling Wong
name: Ricketts, Kate
name: Royle, Gary
name: Williams, Matt
name: Ruheena Mendes
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Cancer
subject: Hematology

description: ECOG/ WHO Performance Status: Table describing ECOG/ WHO Performance status grades used to reflecting patientsâ fitness. (DOCX 15 kb)
Investigating Text Shortening Strategy in BERT: Truncation vs Summarization
Creators: name: Mutasodirin, Mirza Alim
name: Prasojo, Radityo Eko
Publisher: name: arXiv
Year: 2024
Subjects: subject: Computation and Language (cs.CL)
subject: Artificial Intelligence (cs.AI)
subject: FOS: Computer and information sciences

description: The parallelism of Transformer-based models comes at the cost of their input max-length. Some studies proposed methods to overcome this limitation, but none of them reported the effectiveness of summarization as an alternative. In this study, we investigate the performance of document truncation and summarization in text classification tasks. Each of the two was investigated with several variations. This study also investigated how close their performances are to the performance of full-text. We used a dataset of summarization tasks based on Indonesian news articles (IndoSum) to do classification tests. This study shows how the summaries outperform the majority of truncation method variations and lose to only one. The best strategy obtained in this study is taking the head of the document. The second is extractive summarization. This study explains what happened to the result, leading to further research in order to exploit the potential of document summarization as a shortening alternative. The code and data used in this work are publicly available in https://github.com/mirzaalimm/TruncationVsSummarization.
description: The 13th International Conference on Advanced Computer Science and Information Systems (ICACSIS 2021)
Digital Prime Convergence: Exploring Prime Number Concatenation
Creators: name: Poddar, Sambit
Publisher: name: figshare
Year: 2024
Subjects: classificationCode: 490401
subject: Algebra and number theory
classificationCode: 460401
subject: Cryptography
classificationCode: 490399
subject: Numerical and computational mathematics not elsewhere classified
classificationCode: 490302
subject: Numerical analysis

description: Digital Prime Convergence theorem introduces a new concept in number theory about the relativity of consecutive prime numbers and their concatenated digital representation portraying a new property in prime number theory that has never been recognized before. When consecutive prime numbers are connected
continuously and their digital representations multiplied, the theorem exhibits a unique pattern which consequently leads to the appearance of composite numbers. The main focus of this paper is to study the
theorem in great detail, presenting a thorough mathematical proof as well as having illustrative examples, and in depth discussions of its impact and application, where necessary. Through vigorous study and exploration, we not only prove the theorem but also show various aspects of the hypothesis about this intricate prime number and composite number relationship. Beyond, the theorem is discussed in the paper, its modifications are also given and directions for further research are given, therefore, the importance of the theorem to the field of mathematics especially cryptography and computational mathematics is broadly highlighted. Moreover, this paper explores potential extensions of the theorem and outlines avenues for further research, emphasizing its potential impact on various fields of mathematics, including cryptography and computational
mathematics.
A Study of the Static-Light $B_B$ Parameter
Creators: name: Christensen, Joseph
name: Draper, Terrence
name: McNeile, Craig
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We calculate the $B_B$ parameter, relevant for $\overline{B}^0$--$B^0$ mixing, from a lattice gauge theory simulation using the static approximation for the heavy quark and the Wilson action for the light quark and gauge fields. Improved sources, produced by an optimized variational technique, {\sc most}, reduce statistical errors and minimize excited-state contamination of the ground-state signal. Renormalization of four-fermion operator coefficients, using the Lepage-Mackenzie procedure for estimating typical momentum scales, is linearized to reduce order $α_s^2$ uncertainties.
description: 4 pages (LaTeX), Talk presented at LATTICE96(heavy quarks), Minor numerically-insignificant changes made and reference added
Reusing distributed computing software and patterns for midscale collaborative science
Creators: name: Paschos, Paschalis
name: Rynge, Mats
name: Riedel, Benedikt
name: Wuerthwein, Frank
name: Gardner, Robert William
Publisher: name: Zenodo
Year: 2019

description: Many of the challenges faced by the LHC experiments (aggregation of distributed computing resources, management of data across multiple storage facilities, integration of experiment-specific workflow management tools across multiple grid services) are similarly experienced by "midscale" high energy physics and astrophysics experiments, particularly as their data set volumes are increasing at comparable rates. Often these (international, multi-institution) collaborations have outgrown the computing resources offered by their home laboratories, or the capacities of any single member institution. Unlike the LHC experiments, however, these collaborations often lack the manpower required to build, integrate and operate the systems required to meet their scale. In the Open Science Grid, we have organized a team designed to support collaborative science organizations re-use proven software and patterns in distributed processing and data management, often but not restricted to software developed for the LHC. Examples are re-use of the Rucio and FTS3 software for reliable data transfer and management, XRootD for data access and caching, Ceph for large scale pre-processing storage, and Pegasus for workflow management across heterogeneous resources. We summarize experience with the VERITAS gamma ray observatory, the South Pole Telescope (CMB detector), and the XENON dark matter search experiment.
Asymptotic stability of shear-flow solutions to incompressible viscous free boundary problems with and without surface tension
Creators: name: Tice, Ian
Publisher: name: arXiv
Year: 2017
Subjects: subject: Analysis of PDEs (math.AP)
subject: FOS: Mathematics
subject: 35Q30, 35R35, 76E17, 35B40, 76D45, 76E05

description: This paper concerns the dynamics of a layer of incompressible viscous fluid lying above a rigid plane and with an upper boundary given by a free surface. The fluid is subject to a constant external force with a horizontal component, which arises in modeling the motion of such a fluid down an inclined plane, after a coordinate change. We consider the problem both with and without surface tension for horizontally periodic flows. This problem gives rise to shear-flow equilibrium solutions, and the main thrust of this paper is to study the asymptotic stability of the equilibria in certain parameter regimes. We prove that there exists a parameter regime in which sufficiently small perturbations of the equilibrium at time $t=0$ give rise to global-in-time solutions that return to equilibrium exponentially in the case with surface tension and almost exponentially in the case without surface tension. We also establish a vanishing surface tension limit, which connects the solutions with and without surface tension.
description: 33 pages
Additional file 1 of Evaluation of hemolysis in patients supported with Impella 5.5: a single center experience
Creators: name: Clothier, Jessica S.
name: Kobsa, Serge
name: Lester, Lynette
name: Rajeev, Nithya
name: Bojko, Markian
name: Praeger, Jonathan
name: Barr, Mark
name: Lee, Raymond
Publisher: name: figshare
Year: 2025
Subjects: subject: Medicine
subject: Cell Biology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Infectious Diseases
subject: FOS: Health sciences

description: Supplementary Material 1
Additional file 1 of Acupoint combination effect of Shenmen (HT 7) and Sanyinjiao (SP 6) in treating insomnia: study protocol for a randomized controlled trial
Creators: name: Wu, Pei
name: Cheng, Cisong
name: Song, Xiaojun
name: Yang, Ling
name: Deng, Dandan
name: Du, Zhenrong
name: Chen, Xingyu
name: Zou, Tingting
name: Qiao, Ling
name: Li, Na
name: Zhou, Pingping
name: Du, Li
name: Zhu, Yihui
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Immunology
subject: FOS: Clinical medicine
subject: Science Policy

description: Additional file 1. SPIRIT 2013 Checklist: Recommended items to address in a clinical trial protocol and related documents*.
Additional file 1: of Functional domains of SP110 that modulate its transcriptional regulatory function and cellular translocation
Creators: name: Jia-Shiun Leu
name: So-Yi Chang
name: Mu, Chia-Yu
name: Chen, Mei-Ling
name: Bo-Shiun Yan
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Hematology
subject: Plant Biology
subject: 60506 Virology

description: Table S1. A list of primers used for plasmid construction. Table S2. A list of primers used for generating deletion mutants of SP110. Table S3. A list of primers used for site-directed mutagenesis of SP110. Table S4. A list of antibodies used in this study. (PDF 45 kb)
Integrality of L2-Betti numbers
Creators: name: Schick, Thomas
Publisher: name: arXiv
Year: 2000
Subjects: subject: Geometric Topology (math.GT)
subject: Group Theory (math.GR)
subject: K-Theory and Homology (math.KT)
subject: Operator Algebras (math.OA)
subject: FOS: Mathematics
subject: 55N25, 16S34, 46L50

description: The Atiyah conjecture predicts that the L2-Betti numbers of a finite CW-complex with torsion-free fundamental group are integers. We show that the Atiyah conjecture holds (with an additional technical condition) for direct and inverse limits of directed systems of groups for which it is true. As a corollary it holds for residually torsion-free solvable groups, e.g. for pure braid groups or for positive 1-relator groups with torsion free abelianization. Putting everything together we establish a new class of groups for which the Atiyah conjecture holds, which contains all free groups and in particular is closed under taking subgroups, direct sums, free products, extensions with elementary amenable quotient, and under direct and inverse limits of directed systems. This is a corrected version of an older paper with the same title. The proof of Proposition 2.1 of the earlier version contains a gap, as was pointed out to me by Pere Ara. This gap could not be fixed. Consequently, in this new version everything based on this result had to be removed. Please take the errata to "L2-determinant class and approximation of L2-Betti numbers" into account, which are added, rectifying some unproved statements about "amenable extension". As a consequence, throughout, amenable extensions should be extensions with normal subgroups.
description: 25 pages, one unclear sentence in Abstract changed. v3: errata to "L2-determinant class and approximation of L2-Betti numbers" added which require to replace some of the results by apparently slightly weaker versions
title: Gems and nuggets: multicultural education for young children
Creators: name: Accendere , Anita
name: Mantell, Bayleigh
name: Cody, Cathy
name: Aston, Claudia
name: Byrne, Dierdre
name: Kennedy, Stefanie
name: Hart, Shauna
name: Kendall, Delena
name: Kallman, Sarah
name: Matthews, Lauren
name: Dooley, Rebecca
name: Loosemore, Natalie
name: Hunt, Jacynta
name: Sinclair, Indiah
name: Higgs, Megan
name: Butler , Georgia
name: Dyer, Selena
Publisher: name: University of Southern Queensland
Year: 2020
Subjects: UniSQ opentext
early years education, teaching resources, reconciliation, intercultural education, multicultural education

description: This two-part book arose from the concerns of early years educators about Reconciliation and Intercultural education. In response to their concerns, preservice educators from the University of Southern Queensland created the resources included in Gems and Nuggets, published openly on USQ's Pressbooks site. Part 1 is called Reconciliation and it includes resources for helping educators and young children engage with the Reconciliation process. Part 2 is called Intercultural education and it offers teaching ideas and strategies for supporting culturally diverse learners. Each chapter highlights the importance of respecting, valuing and celebrating cultural diversity and the book, as a whole, offers a treasure chest of our preservice teachers' gems of wisdom and nuggets of resources to support and promote Reconciliation and Intercultural Education in the early childhood context.
The cosmic evolution of dust-corrected metallicity in the neutral gas
Creators: name: De Cia, Annalisa
name: Ledoux, Cédric
name: Petitjean, Patrick
name: Savaglio, Sandra
Publisher: name: arXiv
Year: 2017
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: Interpreting abundances of Damped Ly-$α$ Absorbers (DLAs) from absorption-line spectroscopy has typically been a challenge because of the presence of dust. Nevertheless, because DLAs trace distant gas-rich galaxies regardless of their luminosity, they provide an attractive way of measuring the evolution of the metallicity of the neutral gas with cosmic time. This has been done extensively so far, but typically not taking proper dust corrections into account. The aims of this paper are to: i) provide a simplified way of calculating dust corrections, based on a single observed [$X$/Fe], ii) assess the importance of dust corrections for DLA metallicities and their evolution, and iii) investigate the cosmic evolution of iron for a large DLA sample. We have derived dust corrections based on the observed [Zn/Fe], [Si/Fe], or [S/Fe], and confirmed their robustness. We present dust-corrected metallicities in a scale of [Fe/H]$_{\rm tot}$ for 236 DLAs over a broad range of $z$, and assess the extent of dust corrections for different metals at different metallicities. Dust corrections in DLAs are important even for Zn (typically of 0.1-0.2, and up to $0.5$~dex), which is often neglected. Finally, we study the evolution of the dust-corrected metallicity with $z$. The DLA metallicities decrease with redshift, by a factor of 50-100 from today to $\sim12.6$ billion years ago ($z=5$). When including dust corrections, the average DLA metallicities are 0.4--0.5~dex higher than without corrections. The upper envelope of the relation between metallicity and $z$ reaches solar metallicity at $z\lesssim0.5$, although some systems can have solar metallicity already out to $z\sim3$.
description: Forthcoming in A&A. 16 pages, 5 figures, 3 tables
The acceleration of the universe and the physics behind it
Creators: name: Uzan, Jean-Philippe
Publisher: name: arXiv
Year: 2006
Subjects: subject: Astrophysics (astro-ph)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Using a general classification of dark enegy models in four classes, we discuss the complementarity of cosmological observations to tackle down the physics beyond the acceleration of our universe. We discuss the tests distinguishing the four classes and then focus on the dynamics of the perturbations in the Newtonian regime. We also exhibit explicitely models that have identical predictions for a subset of observations.
description: 18 pages, 18 figures
Recombinant analyses in dengue virus type 1 with RDP5
Creators: name: de Paula Oliveira, Hugo
name: Prieto Oliveira, Paula
name: Jacob Machado, Denis
name: Ocaña, Kary
Publisher: name: Zenodo
Year: 2024

description: This upload contains the poster titled "Recombinant analyses in dengue virus type 1 with RDP5" along with its Figures. This work was presented at the Brazilian Bioinformatics Congress: X-meeting 2024 (Salvador, Brazil) by Hugo de Paula Oliveira (National Laboratory of Scientific Computing (LNCC), Laboratory of Bioinformatics (LABINFO). Petrópolis-RJ, Brazil).
The order of the phase transition in 3d U(1)+Higgs theory
Creators: name: Karjalainen, M.
name: Laine, M.
name: Peisa, J.
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We study the order of the phase transition in the 3d U(1)+Higgs theory, which is the Ginzburg-Landau theory of superconductivity. We confirm that for small scalar self-coupling the transition is of first order. For large scalar self-coupling the transition ceases to be of first order, and a non-vanishing scalar mass suggests that the transition may even be of higher than second order.
description: Poster at LATTICE96(electroweak). 4 pages, 5 figures
Higgs production at future $e^+e^-$ colliders in the Georgi-Machacek model
Creators: name: Li, Bin
name: Han, Zhi-Long
name: Liao, Yi
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We study how the dominant single and double SM-like Higgs ($h$) production at future $e^+e^-$ colliders is modified in the Georgi-Machacek (GM) model. On imposing theoretical, indirect and direct constraints, significant deviations of $h$-couplings from their SM values are still possible; for instance, the Higgs-gauge coupling coupling can be corrected by a factor $κ_{hVV}\in[0.93,1.15]$ in the allowed parameter space. For the Higgs-strahlung $e^+e^-\to hZ$ and vector boson fusion processes $e^+e^-\to hν\barν,~he^+e^-$, the cross section could increase by $32\%$ or decrease by $13\%$. In the case of associated production with a top quark pair $e^+e^-\to ht\bar{t}$, the cross section can be enhanced up to several times when the custodial triplet scalar $H_3^0$ is resonantly produced. In the meanwhile, the double Higgs production $e^+e^-\to hhZ~(hhν\barν)$ can be maximally enhanced by one order of magnitude at the resonant $H_{1,3}^0$ production. We also include exclusion limits expected from future LHC runs at higher energy and luminosity and discuss their further constraints on the relevant model parameters. We find that the GM model can result in likely measurable deviations of Higgs production from the SM at future $e^+e^-$ colliders.
description: 31 pages, 17 figures, published in JHEP
Thermal and active fluctuations of a compressible bilayer vesicle
Creators: name: Krishnan, T. V. Sachin
name: Yasuda, Kento
name: Okamoto, Ryuichi
name: Komura, Shigeyuki
Publisher: name: arXiv
Year: 2017
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: We discuss thermal and active fluctuations of a compressible bilayer vesicle by using the results of hydrodynamic theory for vesicles. Coupled Langevin equations for the membrane deformation and the density fields are employed to calculate the power spectral density matrix of membrane fluctuations. Thermal contribution is obtained by means of the fluctuation dissipation theorem, whereas active contribution is calculated from exponentially decaying time correlation functions of active random forces. We obtain the total power spectral density as a sum of thermal and active contributions. An apparent response function is further calculated in order to compare with the recent microrheology experiment on red blood cells. An enhanced response is predicted in the low-frequency regime for non-thermal active fluctuations.
description: 8 pages, 5 figures
Aligning the MATHUSLA Detector Test Stand with Tensor Flow
Creators: name: Watts, Gordon
Publisher: name: Zenodo
Year: 2019

description: MATHUSLA has been proposed as a detector that sits over 100 m from an LHC interaction point, on the surface, to look for ultra long-lived particles. A test stand was constructed with two layers of scintillator paddles and six layers of RPCs, on loan from the DZERO and the Argo-YBJ experiments. Downward and upward going tracks from cosmic ray data and muons from the interaction point have been reconstructed. To align the detector we have used a large sample of tracks and done a simultaneous fit to find the location of the detectors and the track parameters themselves. We used TensorFlow to drive the fit and align the detector. Previous work directly translated C++ code into TensorFlow primitives. In this updated work we have moved towards more fully using TensorFlow primitives as well as the GPU capabilities of TensorFlow. All aspects of this work will be discussed, including the effort to move away from the C++ structured code to the TensorFlow tensors and more powerful primitives.
Supplemental Figure 1: Padi2 siRNA targeting in Olineu precursors from Co-expression of PADI isoforms during progenitor differentiation enables functional diversity
Creators: name: Patil, Kim Vikhe
name: Meijer, Mandy
name: Mak, Kylie Hin-Man
name: Yang, Wei
name: Falcão, Ana Mendanha
name: Castelo-Branco, Gonçalo
name: Genander, Maria
Publisher: name: The Royal Society
Year: 2023

description: Protein isoforms, generated through alternative splicing or promoter usage, contribute to tissue function. Here, we characterize the expression of predicted Padi3α and Padi3β isoforms in hair follicles and describe expression of Padi2β, a hitherto unknown PADI2 isoform, in the oligodendrocyte lineage. Padi2β transcription is initiated from a downstream intronic promoter, generating an N-terminally truncated, unstable, PADI2β. By contrast to the established role of the canonical PADI2 (PADI2α) (Falcao et al. 2019 Cell Rep. 27, 1090–102 e10 (doi:10.1016/j.celrep.2019.03.108)), PADI2β inhibits oligodendrocyte differentiation, suggesting that PADI2 isoforms exert opposing effects on oligodendrocyte lineage progression. We localize Padi3α and Padi3β to developing hair follicles and find that both transcripts are expressed at low levels in progenitor cells, only to increase in expression concomitant with differentiation. When expressed in vitro, PADI3α and PADI3β are enriched in the cytoplasm and precipitate together. Whereas PADI3β protein stability is low and PADI3β fails to induce protein citrullination, we find that the enzymatic activity and protein stability of PADI3α is reduced in the presence of PADI3β. We propose that PADI3β modulates PADI3α activity by direct binding and heterodimer formation. Here, we establish expression and function of Padi2 and Padi3 isoforms, expanding on the mechanisms in place to regulate citrullination in complex tissues.This article is part of the Theo Murphy meeting issue ‘The virtues and vices of protein citrullination’.
Multi-variable Polynomial Solutions to Pell's Equation and Fundamental Units in Real Quadratic Fields
Creators: name: Laughlin, James Mc
Publisher: name: arXiv
Year: 2000
Subjects: subject: Number Theory (math.NT)
subject: FOS: Mathematics
subject: 11A55

description: For each positive integer $n$ it is shown how to construct a finite collection of multivariable polynomials $\{F_{i}:=F_{i}(t,X_{1},..., X_{\lfloor \frac{n+1}{2} \rfloor})\}$ such that each positive integer whose squareroot has a continued fraction expansion with period $n+1$ lies in the range of exactly one of these polynomials. Moreover, each of these polynomials satisfy a polynomial Pell's equation $C_{i}^{2} -F_{i}H_{i}^{2} = (-1)^{n-1}$ (where $C_{i}$ and $H_{i}$ are polynomials in the variables $t,X_{1},..., X_{\lfloor \frac{n+1}{2} \rfloor}$) and the fundamental solution can be written down. Likewise, if all the $X_{i}$'s and $t$ are non-negative then the continued fraction expansion of $\sqrt{F_{i}}$ can be written down. Furthermore, the congruence class modulo 4 of $F_{i}$ depends in a simple way on the variables $t,X_{1},..., X_{\lfloor \frac{n+1}{2} \rfloor}$ so that the fundamental unit can be written down for a large class of real quadratic fields. Along the way a complete solution is given to the problem of determining for which symmetric strings of positive integers $a_{1},..., a_{n}$ do there exist positive integers $D$ and $a_{0}$ such that $\sqrt{D} = [ a_{0};\bar{a_{1}, >..., a_{n},2a_{0}}]$.
description: 13 pages
Additional file 7: of A methodology to extract outcomes from routine healthcare data for patients with locally advanced non-small cell lung cancer
Creators: name: Swee-Ling Wong
name: Ricketts, Kate
name: Royle, Gary
name: Williams, Matt
name: Ruheena Mendes
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: OPCS codes identifying secondary management: Table listing radiotherapy OPCS codes, chemotherapy OPCS codes and interventional OPC codes. (DOCX 18 kb)
title: ADCO, Ordre cistercien et abbaye de Cîteaux : comptes pour l'ordre (1337-1347), comptes du boursier (1377-1402) (11 H 1160), f. 00038
Creators: name: de la Côte-d'Or, Archives départementales
name: CBMA/CG21/F.PETOT/2017
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: comptes
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge

description: Ordre cistercien et abbaye de Cîteaux : comptes pour l'ordre (1337-1347), comptes du boursier (1377-1402), Archives départementales de la Côte-d'Or, (11 H 1160). Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Ordre cistercien et abbaye de Cîteaux : comptes pour l'ordre (1337-1347), comptes du boursier (1377-1402), Archives départementales de la Côte-d'Or, (11 H 1160), f. 00038, in Projet CBMA - Corpus Burgundiae Medii Aevi \[Ressource en ligne\], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
Impact of family cancer history on acute stress reactivity
Creators: name: Howell, Lisa Ann
Publisher: name: Washington State University
Year: 2010
Subjects: Stress

description: Objective: A burgeoning set of studies have examined ways in which a family history of cancer may be associated with chronic or background stress. This study compared cardiovascular reactivity and affective responses to two laboratory acute stress tasks (cancerspecific and neutral Stroop tests) among young adults with (FCH+) and without (FCH-) a firstdegree cancer family history. The primary study hypothesis was that compared to the FCHgroup, individuals in the FCH+ group would experience increased cardiovascular reactivity during and immediately after the cancer-specific Stroop task. Design: 81 participants completed a questionnaire and participated in laboratory-based acute stress tasks. Main Outcome Measures: The primary outcome variables included heart rate and blood pressure (systolic and diastolic). Change in state mood and task performance were also assessed. Results: Contrary to expectations, there were no significant Task X Group interactions for any for any of the physiological outcomes variables. A significant main effect for recovery heart rate was noted such that the Neutral Stroop was associated with better recovery than the Cancer Stroop. Secondary hypotheses were partially supported; in a Task X Group interaction the FCH+ group endorsed more task anxiety and recovery anger during the Cancer Stroop than during the Neutral Stroop. Participants, regardless of group status, made a higher percentage of errors during the Cancer Stroop. Exploratory analyses of the FCH+ group revealed that certain features of the family cancer experience (i.e., which relative affected and physical proximity to relative at diagnosis) predicted differences in task and recovery SBP and DBP. Conclusions: This study found limited evidence to support the hypotheses that compared to the FCH- group, FCH+ individuals would have increased reactivity to a cancer-relevant acute stress task. We did find some evidence to support more negative affective responses to the Cancer Stroop within the FCH+ group, and some indication that both groups displayed greater reactivity and cognitive interference to the cancer-relevant task. Important facets of the family cancer history experience that explained some variability in physiological responses within the FCH+ group. Future research should further explore facets of the family cancer experience that influence physiological and psychological stress responses.
Additional file 1 of Characterization, genomic analysis and preclinical evaluation of the lytic Staphylococcus bacteriophage PSK against methicillin-resistant Staphylococcus aureus wound isolate
Creators: name: Zanaty, Abanoub A.
name: Dishisha, Tarek
name: El-Sayed-Ahmed, Mohamed Abd El-Gawad
name: Abdel-Fattah, Maha M.
name: Ahmed, Kawkab A.
name: Abdelkader, Karim
Publisher: name: figshare
Year: 2025
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology
subject: Computational Biology

description: Supplementary Material 1