cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1 of A case of spastic paraplegia type 11 with a variation in the SPG11 gene
Creators: name: Elmas, Muhsin
name: Basak Gogus
name: Değirmenci, Banu
name: Solak, Mustafa
name: J. G. Gleeson
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Pharmacology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Additional file 1:. CARE Checklist of information to include when writing a case report
Clustering Evolutionary Stock Market Model
Creators: name: Wang, Jie
name: Yang, Chun-Xia
name: Zhou, Pei-Ling
name: Jin, Ying-Di
name: Zhou, Tao
name: Wang, Bing-Hong
Publisher: name: arXiv
Year: 2004
Subjects: subject: Other Condensed Matter (cond-mat.other)
subject: FOS: Physical sciences

description: As a typical representation of complex networks studied relatively thoroughly, financial market presents some special details, such as its nonconservation and opinions spreading. In this model, agents congregate to form some clusters, which may grow or collapse with the evolution of the system. To mimic an open market, we allow some ones participate in or exit the market suggesting that the number of the agents would fluctuate. Simulation results show that the large events are frequent in the fluctuations of the stock price generated by the artificial stock market when compared with a normal process and the price return distribution is a \emph{lévy} distribution in the central part followed by an approximately exponential truncation.
description: 9 pages, 8 figures
On the Mass Accretion Rates of Herbig Ae/Be Stars. Magnetospheric Accretion or Boundary Layer?
Creators: name: Mendigutía, I.
Publisher: name: arXiv
Year: 2020
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: Understanding how young stars gain their masses through disk-to-star accretion is of paramount importance in astrophysics. It affects our knowledge about the early stellar evolution, the disk lifetime and dissipation processes, the way the planets form on the smallest scales, or the connection to macroscopic parameters characterizing star-forming regions on the largest ones, among others. In turn, mass accretion rate estimates depend on the accretion paradigm assumed. For low-mass T Tauri stars with strong magnetic fields there is consensus that magnetospheric accretion (MA) is the driving mechanism, but the transfer of mass in massive young stellar objects with weak or negligible magnetic fields probably occurs directly from the disk to the star through a hot boundary layer (BL). The intermediate-mass Herbig Ae/Be (HAeBe) stars bridge the gap between both previous regimes and are still optically visible during the pre-main sequence phase, thus constituting a unique opportunity to test a possible change of accretion mode from MA to BL. This review deals with our estimates of accretion rates in HAeBes, critically discussing the different accretion paradigms. It shows that although mounting evidence supports that MA may extend to late-type HAes but not to early-type HBes, there is not yet a consensus on the validity of this scenario versus the BL one. Based on MA and BL shock modeling, it is argued that the ultraviolet regime could significantly contribute in the future to discriminating between these competing accretion scenarios.
description: 26 pages, 5 figures, 1 table. Invited Review accepted for publication in "Galaxies" special issue: "Star Formation in the UV", ed. Jorick Vink
An Assessment of the Global Soybean Industry: An Application of Stochastic Equilibrium Displacement Model
Creators: name: Costa, Rafael F.
name: Xia, Yan
name: Rosson, C. Parr
name: Costa, Rafael F.
name: Xia, Yan
name: Rosson, C. Parr
Publisher: name: Unknown
Year: 2007
Subjects: subject: International Relations/Trade
subject: International Trade
subject: Loan Deficiency Payment
subject: Soybean
subject: Soybean Joint Products
subject: Stochastic Equilibrium Displacement Model
subject: Transportation Costs

description: This study uses stochastic equilibrium displacement model (SEDM) to investigate the impact on the soybean and its joint products (soymeal and soyoil) sectors of different countries and regions from transportation cost reduction in Brazil incorporating assumptions of decrease in the U.S. loan deficiency payment.
Das Kalamon-Kloster in der Jerichoebene
Creators: name: Schneider, Alfons Maria
Publisher: name: Oriens christianus : Hefte für die Kunde des christlichen Orients
Year: 2024

description: Oriens christianus : Hefte für die Kunde des christlichen Orients, Bd. 35 Nr. 1 (1938): Oriens christianus, Band 35, Heft 1
Additional file 1 of Investigating cellular and molecular mechanisms of neurogenesis in Capitella teleta sheds light on the ancestor of Annelida
Creators: name: A. Sur
name: A. Renfro
name: P. J. Bergmann
name: Meyer, N. P.
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Zoology

description: Additional file 1: Figure S1. Dynamics of cell proliferation in the anterior neuroectoderm. (A–D) 30-min EdU (green) pulses from stages 3–6. Arrows indicate EdU+ cells along the basal edges of the brain that are hypothesized to be part of the anterior mesoderm (E–G) 45-min EdU labeling coupled with anti-phospho-Histone H3 (PH3) immunostaining at stages 4–6. (H–J) Dot boxplots showing the dynamics of cell proliferation in the head across stages 3–6. Capital letters above the boxplots indicate statistical groups comparing cell counts or proportions at different stages. Boxplots with the same letter are not significantly different. Those with different letters are significantly different, with p
Heavy-to-light ratios as a test of medium-induced energy loss at RHIC and the LHC
Creators: name: Armesto, N.
name: Cacciari, M.
name: Dainese, A.
name: Salgado, C. A.
name: Wiedemann, U. A.
Publisher: name: arXiv
Year: 2005
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Nuclear Experiment (nucl-ex)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: The ratio of nuclear modification factors of high-$p_T$ heavy-flavored mesons tolight-flavored hadrons (heavy-to-light ratio) is shown to be a sensitive tool to test medium-induced energy loss at RHIC and LHC energies. Heavy-to-light ratios of $D$ mesons at RHIC in the region $7
description: 5 pages, latex, 4 eps figs included using graphicx; to appear in the proceedings of 18th International Conference on Ultrarelativistic Nucleus-Nucleus Collisions: Quark Matter 2005 (QM 2005), Budapest, Hungary, 4-9 Aug 2005
Studies of the $^{1}$S$_{0}$--$^3$P$_0$ transition in atomic ytterbium for optical clocks and qubit arrays
Creators: name: Hong, Tao
name: Cramer, Claire
name: Cook, Eryn
name: Nagourney, Warren
name: Fortson, E. N.
Publisher: name: arXiv
Year: 2005
Subjects: subject: Atomic Physics (physics.atom-ph)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: We report an observation of the weak $6^{1}$S$_{0}$-$6^3$P$_0$ transition in $^{171,173}$Yb as an important step to establish Yb as a primary candidate for future optical frequency standards, and to open up a new approach for qubits using the $^{1}$S$_{0}$ and $^3$P$_0$ states of Yb atoms in an optical lattice.
description: 5 pages, 3 figures
Precision Timing and Spatial Allocation of Economic Fertilizer Application
Creators: name: Dillon, Carl R.
name: Gandonou, Jean-Marc
name: Dillon, Carl R.
name: Gandonou, Jean-Marc
Publisher: name: Unknown
Year: 2007
Subjects: subject: Crop Production/Industries
subject: Q12
subject: Q15
subject: Q55

description: Recent increases in fertilizer, particularly nitrogen, and fuel price have resulted in increased production cost for farmers. In this paper a farm level production model that compare uniform and variable rate fertilizer (NPK) application is developed that permits an analysis of the economic performance of fertilizer management regarding profitability. Results show that farmer's exposure to fertilizer and fuel prices risk have substantial impact both on the expected net returns and production practices for producers both uniform and variable rate technology.
Additional file 5 of Can ultrasound novices develop image acquisition skills after reviewing online ultrasound modules?
Creators: name: Situ-LaCasse, Elaine
name: Acuña, Josie
name: Huynh, Dang
name: Amini, Richard
name: Irving, Steven
name: Samsel, Kara
name: Patanwala, Asad E.
name: Biffar, David E.
name: Srikar Adhikari
Publisher: name: figshare
Year: 2021
Subjects: subject: Space Science
subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 5. Links to SonoSim modules and descriptions.
Additional file 10 of Investigating cellular and molecular mechanisms of neurogenesis in Capitella teleta sheds light on the ancestor of Annelida
Creators: name: A. Sur
name: A. Renfro
name: P. J. Bergmann
name: Meyer, N. P.
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Zoology

description: Additional file 10: Figure S5. Gene expression in trunk EdU+ cells at later developmental stages. (A–E”) 30-min EdU pulse (cyan) at different stages of neurogenesis was combined with FISH (red). Ventral views of the trunk neuroectoderm (A, B, C, D, E) and transverse sections through the anterior (A’, B′, C′, D’, E’), and posterior (A”, B″, C″, D”, E”) trunk neuroectoderm are shown. Overlap of EdU+ cells with Ct-soxB1 (A–A”), Ct-ngn (B–B″), Ct-ash1 (C–C″), Ct-neuroD (D–D”), and Ct-elav1 (E–E”) at later stages are shown. In panels A–E”, closed arrowheads indicate EdU+/gene+ cells while open arrowheads show EdU−/gene+ cells. In ventral view panels A–E, orientation of the animal is indicated in the bottom right corner, and developmental stage is indicated in the top right corner. (F–H) The number of EdU+ cells expressing a Ct-soxB1 (F), Ct-ngn (G), and Ct-ash1 (H) counted within ROI 1, 2 and 3 in segments 2–4, 5–7, and 8–10 in the VNC were scored at stages 4–6 as shown in Fig. S4H. In F–H, capital letters on top of the boxplots (e.g. A, B etc.) indicate statistical significance computed using mixed effects model analysis for comparison of individual ROIs across stages, e.g., comparison of EdU+/gene+ numbers in ROI 1 at stage 4 to that at stage 5 and 6 and so on for ROI 2. Black dots represent outliers (±3 S.D.). In orthogonal views, apical is up, basal is down and yellow dot shows the position of the ventral midline. White dotted line marks the apical boundaries of the neuroectoderm. In ventral views, anterior is to the left and posterior to the right. An asterisk denotes the mouth. Scale bar is 50 μm. ant, anterior; vent, ventral. ST4mid: Stage 4 middle, ST4tt: Stage 4 telotroch, ST5: Stage 5, ST6: Stage 6.
On the Asymptotic Weight and Stopping Set Distribution of Regular LDPC Ensembles
Creators: name: Rathi, Vishwambhar
Publisher: name: arXiv
Year: 2005
Subjects: subject: Information Theory (cs.IT)
subject: FOS: Computer and information sciences

description: We estimate the variance of weight and stopping set distribution of regular LDPC ensembles. Using this estimate and the second moment method we obtain bounds on the probability that a randomly chosen code from regular LDPC ensemble has its weight distribution and stopping set distribution close to respective ensemble averages. We are able to show that a large fraction of total number of codes have their weight and stopping set distribution close to the average.
description: Submitted to IEEE Trans on Information Theory (revised version). Minor comments from reviewers addressed
An Inverse Almost Ideal Demand System for Oysters in the United States: An Empirical Investigation of the Impacts of Mandatory Labels
Creators: name: Dedah, Cheikhna O.
name: Keithly, Walter R.
name: Diop, Hamady
name: Kazmierczak, Richard F.
name: Dedah, Cheikhna O.
name: Keithly, Walter R.
name: Diop, Hamady
name: Kazmierczak, Richard F.
Publisher: name: Unknown
Year: 2007
Subjects: Demand and Price Analysis

description: In 1991, mandatory warning labels were imposed on the sale of oysters harvested from the Gulf of Mexico. Using an IAIDS model, this paper investigates the impact of these labels on the demand for Gulf product as well related oyster products (the Chesapeake, the Pacific, and imports).
BIOECONOMIC MODELING TO ASSESS ECONOMIC AND WATER QUALITY IMPACTS OF LAND USE CHANGE
Creators: name: Bhattarai, Gandhi Raj
name: Hite, Diane
name: Srivastava, Puneet
name: Hatch, L. Upton
name: Marzen, Luke
name: Bhattarai, Gandhi Raj
name: Hite, Diane
name: Srivastava, Puneet
name: Hatch, L. Upton
name: Marzen, Luke
Publisher: name: Unknown
Year: 2007
Subjects: Land Economics/Use

description: Changes in water quality and agricultural and forest revenues due to land use changes are compared. A biophysical model estimates the effect in nitrogen and phosphorus runoff and sediment deposition. The results are combined with farm enterprise budgets to estimate the economic returns resulting from land use changes.
Out of the Swampland with Multifield Quintessence?
Creators: name: Cicoli, Michele
name: Dibitetto, Giuseppe
name: Pedro, Francisco G.
Publisher: name: arXiv
Year: 2020
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: Multifield models with a curved field space have already been shown to be able to provide viable quintessence models for steep potentials that satisfy swampland bounds. The simplest dynamical systems of this type are obtained by coupling Einstein gravity to two scalar fields with a curved field space. In this paper we study the stability properties of the non-trivial fixed points of this dynamical system for a general functional dependence of the kinetic coupling function and the scalar potential. We find the existence of non-geodesic trajectories with a sharp turning rate in field space which can give rise to late-time cosmic acceleration with no need for flat potentials. In particular, we discuss the properties of the phase diagram of the system and the corresponding time evolution when varying the functional dependence of the kinetic coupling. Interestingly, upon properly tuning the initial conditions of the field values, we find trajectories that can describe the current state of the universe. This could represent a promising avenue to build viable quintessence models out of the swampland if they could be consistently embedded in explicit string constructions.
description: 16 pages, 6 figures; typos corrected and references added
The Shapes of Atomic Lines from the Surfaces of Weakly Magnetic Rotating Neutron Stars and Their Implications
Creators: name: Bhattacharyya, Sudip
name: Miller, M. Coleman
name: Lamb, Frederick K.
Publisher: name: arXiv
Year: 2004
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Motivated by the report by Cottam et al. (2002) of iron resonance scattering lines in the spectra of thermonuclear bursts from EXO 0748-676, we have investigated the information about neutron star structure and the geometry of the emission region that can be obtained by analyzing the profiles of atomic lines formed at the surface of the star. We have calculated the detailed profiles of such lines, taking into account the star's spin and the full effects of special and general relativity, including light-bending and frame-dragging. We discuss the line shapes produced by rotational Doppler broadening and magnetic splitting of atomic lines, for the spin rates and magnetic fields expected in neutron stars in low-mass X-ray binary systems. We show that narrow lines are possible even for rapidly spinning stars, if the emission region or the line of sight are close to the spin axis. For most neutron stars in low-mass systems, magnetic splitting is too small to obscure the effects of special and general relativity. We show that the ratio of the star's mass to its equatorial radius can be determined to within 5% using atomic line profiles, even if the lines are broad and skewed. This is the precision required to constrain strongly the equation of state of neutron star matter. We show further that if the radius and latitude of emission are known to ~ 5-10% accuracy, then frame-dragging has a potentially detectable effect on the profiles of atomic lines formed at the stellar surface.
description: Revised version, 16 pages, 6 figures, published in ApJ
Spectroscopic (FT-IR, FT-Raman, UV-Visible), Quantum Mechanical Based Computational Studies and Molecular Docking Analysis of 2-Amino-3,5-dichloropyridine
Creators: name: Selvakumari, S.
name: Venkataraju, C.
name: Muthu, S.
name: Irfan, Ahmad
name: Sevvanthi, S.
name: Asif, Fazilath Basha
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences

description: Spectral investigations (FT-IR, FT-Raman) of the heading compound 2-Amino-3,5-dichloropyr- idine are documented and DFT quantum mechanical estimations exercising Gaussian software package has been expended to generate the theoretical report. B3LYP scheme with 6-311++G(d,p) source set has been commissioned to exhibit the molecular structure, wavenumbers of vibration and electronic properties of the heading compound. The experimental vibrational frequencies in comparison with the theoretical data obtained from the above said DFT method and the assignments of vibrations have been estimated using the Potential Energy Distribution. The UV-Visible spectrum was scrutinised using the TD-DFT system with a variety of solutions. HOMO-LUMO energies, Fukui functions, softness were also accounted. NBO analysis has also been explored to reveal the steadiness of the molecule. Molecular electrostatic potential inspection, Electron localisation function and Local orbital locator have also been raised in the study. Additionally, to predict the biological activity of the heading compound, drug-likeness, molinspiration, ADMET, environmental toxicity properties and docking reports have been accomplished.
Erbe christlicher Antike im Bildschmuck eines arabischen Evangelienbuches des 14. Jahrhundert
Creators: name: Baumstark, Anton
Publisher: name: Oriens christianus : Hefte für die Kunde des christlichen Orients
Year: 2024

description: Oriens christianus : Hefte für die Kunde des christlichen Orients, Bd. 35 Nr. 1 (1938): Oriens christianus, Band 35, Heft 1
Facile Preparation of Antibacterial Gelatin-Kaolin Bionano- composite Membranes and Study of Water Sorption and Water Vapour Transmission Rate (WVTR)
Creators: name: Shrungi, Manjulata
name: Goswami, Anjana
name: Bajpai, Jaya
name: Bajpai, Anil Kumar
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: Biophysics
subject: Space Science
subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified

description: Glutaraldehyde crosslinked gelatin kaolin bionanocomposite films were prepared by casting method and characterized by various techniques and water vapour transmission rates and water sorption studies were performed. The FTIR study revealed the interaction between functional groups of gelatin and kaolin evidenced by shifting of some spectral peaks. The grain size of bionanocomposite films was calculated to be 29 nm from XRD analysis and the crystallinity was 62 %. The SEM and AFM analysis suggested for heterogeneous surfaces having pores and pits. The glass transition temperature of gelatin film was found to increase from 70 to 100°C as revealed by DSC technique. The thermal properties increased with increasing kaolin. The addition of kaolin marked an increase in Young’s modulus and tensile strength. The bionanocomposite films showed a fall in water sorption capacity with increasing kaolin content. The water vapour transmission rate (WVTR) decreased with increasing addition of kaolin. The films were found to show antibacterial nature against Aureus.
Transgenic approaches to improved insect resistance in poplar
Creators: name: Gill, Rishi Indra Singh
Publisher: name: University of British Columbia
Year: 2009

description: Amines and their derivatives are known to influence insect behavior involved in feeding and reproduction. In order to examine the feasibility of improving the resistance of poplar to insect pests by the introduction of a plant-derived amine-generating transgene, explants from the hybrid poplar clone 'NC5339' (Populus alba x P. grandidentata cv. 'Crandon') and 'INRA 717 1B4' (P. tremula x P. alba) were transformed with a Camptotheca acuminata tryptophan decarboxylase cDNA driven by the CaMV35S promoter. The enzyme tryptophan decarboxylase (TDC) catalyzes the decarboxylation of tryptophan to tryptamine, which, in addition to being a bio-active amine itself, is known to act as a precursor of various other indole derivatives. TDC1 transgenic tobacco plants were also generated, to allow a comparison of the TDC1 overexpression phenotype in both a herbaceous and a woody perennial species. Poplar and tobacco plants were also transformed with an 'empty' vector (pBin19/PRT101) to use as a control in insect bioassays. Putative transgenic lines were confirmed by PCR for the TDC1 gene sequence and by the expression analysis of the transgene mRNA and encoded protein. Chemical and radiotracer analyses of the transgenic plants suggested that the primary product of tryptophan decarboxylation was tryptamine, which was not metabolized further. No visible phenotypic changes were associated with ectopic TDC1 expression in either species. In insect bioassays, an increased accumulation of tryptamine in TDC1 transgenic lines was consistently associated with an adverse effect on feeding behavior and physiology of Malacosoma disstria (forest tent caterpillar, FTC) and Manduca sexta (tobacco hornworm, THW). Behavior studies with FTC and THW larvae showed that the acceptability of the leaf tissue to larvae was substantially reduced as the tryptamine levels in the tissue increased. Physiological studies with the FTC and THW larvae showed that consumption of leaf tissue from the transgenic lines is clearly deleterious to larva growth. The growth inhibition induced by feeding on high TDC1 tissue is presumably due to a post-ingestive physiological mechanism. This work demonstrates that ectopic expression of TDC1 can allow sufficient tryptamine to accumulate in poplar and tobacco leaf tissue to adversely affect the growth of insect pests that normally feed on these plants.
Virtual Astronomy, Information Technology, and the New Scientific Methodology
Creators: name: Djorgovski, S. G.
Publisher: name: arXiv
Year: 2005
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: All sciences, including astronomy, are now entering the era of information abundance. The exponentially increasing volume and complexity of modern data sets promises to transform the scientific practice, but also poses a number of common technological challenges. The Virtual Observatory concept is the astronomical community's response to these challenges: it aims to harness the progress in information technology in the service of astronomy, and at the same time provide a valuable testbed for information technology and applied computer science. Challenges broadly fall into two categories: data handling (or "data farming"), including issues such as archives, intelligent storage, databases, interoperability, fast networks, etc., and data mining, data understanding, and knowledge discovery, which include issues such as automated clustering and classification, multivariate correlation searches, pattern recognition, visualization in highly hyperdimensional parameter spaces, etc., as well as various applications of machine learning in these contexts. Such techniques are forming a methodological foundation for science with massive and complex data sets in general, and are likely to have a much broather impact on the modern society, commerce, information economy, security, etc. There is a powerful emerging synergy between the computationally enabled science and the science-driven computing, which will drive the progress in science, scholarship, and many other venues in the 21st century.
description: PDF file, 7 pages, an invited review, to appear in IEEE Proc. of CAMP05, "Computer Architectures for Machine Perception", eds. V. Di Gesu & D. Tegolo, in press (2005)
Consequences of the CAP reform on the environment and nature conservation Results of an empirical study in Germany
Creators: name: Kantelhardt, Jochen
name: Ganzert, Christian
name: Kramer, Christine
name: Kantelhardt, Jochen
name: Ganzert, Christian
name: Kramer, Christine
Publisher: name: Unknown
Year: 2008
Subjects: subject: reform of the Common European Agricultural Policy
subject: decoupling of direct payments
subject: cross compliance
subject: regional embeddedness of farmers
subject: intrinsic motivation

description: The Common European Agricultural Policy (CAP) reform not only has an impact on agriculture but also has significant effects on nature and the environment. This is specifically caused by decoupling direct payments from agricultural production, which will increase the market orientation of agriculture and by implementing cross compliance. A number of key aspects promoting a future environment-friendly development of the CAP are suggested, based on an empirical analysis of the impact of this reform in eight German regions. In particular, we recommend the coupling of direct payments with the provision of environmental and social welfare services as well as the installation of a long-term monitoring system to enhance the understanding of the links between policy, behaviour of farmers and environmental systems.
Additional file 1 of Insurance disparity in cardiovascular mortality among non-elderly cancer survivors
Creators: name: Tiantian Shi
name: Changchuan Jiang
name: Cenjing Zhu
name: Fangcheng Wu
name: Fotjhadi, Irma
name: Zarich, Stuart
Publisher: name: figshare
Year: 2021
Subjects: Medicine
Biotechnology
Cancer
Science Policy

description: Additional file 1.
A method to calculate economic key figures with regard to plot structure improvements
Creators: name: Kapfer, Martin
name: Kantelhardt, Jochen
name: Kapfer, Martin
name: Kantelhardt, Jochen
Publisher: name: Unknown
Year: 2008
Subjects: subject: land consolidation
subject: geographical information system
subject: direct economic effects
subject: labour demand
subject: machinery costs

description: The aim of land consolidation projects is to improve the competitiveness of agriculture. Since land consolidation is subsidised by national and European means, the effectiveness of such measures must be determined. The following paper presents a method which makes it possible to calculate the direct economic effects of land consolidation. The calculations, considering labour demand, machinery costs and headland effects, compare the economic situation before and after land consolidation. The method was applied to four land consolidation projects in Bavaria. It can be shown that, to a varying degree, land consolidation in the studied areas leads to a substantial decrease in labour demand and machinery costs.
Neural Contraction Metrics for Robust Estimation and Control: A Convex Optimization Approach
Creators: name: Tsukamoto, Hiroyasu
name: Chung, Soon-Jo
Publisher: name: arXiv
Year: 2020
Subjects: subject: Systems and Control (eess.SY)
subject: Artificial Intelligence (cs.AI)
subject: Machine Learning (cs.LG)
subject: Robotics (cs.RO)
subject: Optimization and Control (math.OC)
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: FOS: Computer and information sciences
subject: FOS: Mathematics

description: This paper presents a new deep learning-based framework for robust nonlinear estimation and control using the concept of a Neural Contraction Metric (NCM). The NCM uses a deep long short-term memory recurrent neural network for a global approximation of an optimal contraction metric, the existence of which is a necessary and sufficient condition for exponential stability of nonlinear systems. The optimality stems from the fact that the contraction metrics sampled offline are the solutions of a convex optimization problem to minimize an upper bound of the steady-state Euclidean distance between perturbed and unperturbed system trajectories. We demonstrate how to exploit NCMs to design an online optimal estimator and controller for nonlinear systems with bounded disturbances utilizing their duality. The performance of our framework is illustrated through Lorenz oscillator state estimation and spacecraft optimal motion planning problems.
description: IEEE Control Systems Letters (L-CSS). Preprint version, accepted June 2020
Eating Out in the British Isles
Creators: name: Keelan, Conor D.
name: Henchion, Maeve M.
name: Newman, Carol F.
name: Keelan, Conor D.
name: Henchion, Maeve M.
name: Newman, Carol F.
Publisher: name: Unknown
Year: 2008
Subjects: subject: Food Consumption/Nutrition/Food Safety
subject: Food-Away-From-Home
subject: Quick-service
subject: Full-service
subject: Double Hurdle Model
subject: Box-Cox Transformation.

description: This paper presents a comparative analysis of the foodservice industries in both Ireland and the UK. Each industry is analysed separately using the most recently available Household Budget Survey datasets for Ireland and the most recent Expenditure and Food Datasets for the UK and is disaggregated into quick-service (fast food and takeaway) and full-service (hotel and restaurant meals), the two largest components of each industry. A double hurdle model, adjusted for misspecification, is used in this analysis. A number of variables affect both dependent variables in the same way, for example, income and age and the number of workers variable, but differences are apparent throughout the discussion. Perhaps the most interesting point to highlight is how similar the Irish and UK results for both quick-service and full-service expenditure have been despite the UK industry being at a more mature stage of growth. Health awareness significantly reduces the likelihood of participation and reduces the amount of expenditure on quick-service but no similar effect is observed for full-service in either Ireland or the UK, which in itself is significant as the UK industry is more developed than its Irish equivalent.
Pempeliella bulgarica Slamka & Plant 2016
Creators: name: Yepishin, Viktor
name: Bidzilya, Oleksiy
name: Budashkin, Yuriy
name: Zhakov, Oleksandr
name: Mushynskyi, Vadym
name: Novytskyi, Sergiy
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Pyralidae
Pempeliella
Pempeliella bulgarica

description: Pempeliella bulgarica Slamka & Plant, 2016
 Material examined: 1♂, Crimea, Karadah, biostation, at light, 21.vii.1987 (Yu. Budashkin). 1♂, Crimea, Karadah, 20.vii.2004 (Yu. Budashkin) (ZMKU). 1♂, Crimea, Karadah, at light, 13.vii.2011 (O. Bidzilya), genitalia slide: O. Bidzilya prep. no. 266 / 18♂ (ZMKU). 1♂, Crimea, Karadah, at light, 15.vi.2013 (Yu. Budashkin), genitalia slide: V. Yepishin prep. no. 103.19 ♂ (ZMKU). 1♂, 1♀, Crimea, Uzun-Syrt, e. l., 7, 17.vi.2014 (Yu. Budashkin), genitalia slide: V. Yepishin prep. no. 102.19 ♂, 104.19 ♀ (ZMKU).
 Distribution. Bulgaria, Hungary, Serbia, Albania, Turkey (Slamka 2019); Russia: S Urals, Volgograd and Voronezh regions (Slamka 2019), Middle Urals (Sinev et al. 2019); Ukraine: Kharkiv region (Karolinskiy 2018; Karolinskiy et al. 2018), first record for Crimea.
 Biology. About ten last instar and immature larvae were collected 10.v.2014 feeding on Thymus tauricus Klok. & Shost. in the mountain-xerophytic habitats of the southern slope of Uzun-Syrt hill. The life style of the larvae was studied in the laboratory. Larvae live singly in tight brown silken tubes, covered with frass and dry parts of plants that fixed firmly to the stem of the host plant. Larva feeds on green leaves, leaving the shelter. Pupation occurs without diapause on the host plant in the last ten days of May, adults emerged 7.vi (four males, one female), 17.vi (one female) and 19.vi.2014. The reared specimens, along with others collected at light in the Karadah Nature Reserve were misidentified as Pempeliella sororiella (Zeller, 1839) (Budashkin 2004, 2014b). The latter species must be removed from the list of Pyralidae of Ukraine due to its current re-identification as P. bulgarica.
description: Published as part of Yepishin, Viktor, Bidzilya, Oleksiy, Budashkin, Yuriy, Zhakov, Oleksandr, Mushynskyi, Vadym & Novytskyi, Sergiy, 2020, New records of little known pyraloid moths (Lepidoptera: Pyraloidea) from Ukraine, pp. 101-120 in Zootaxa 4808 (1) on page 116, DOI: 10.11646/zootaxa.4808.1.5, http://zenodo.org/record/3927960
Generation and control of Greenberger-Horne-Zeilinger entanglement in superconducting circuits
Creators: name: Wei, L. F.
name: Liu, Yu-xi
name: Nori, Franco
Publisher: name: arXiv
Year: 2005
Subjects: subject: Quantum Physics (quant-ph)
subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: Going beyond the entanglement of microscopic objects (such as photons, spins, and ions), here we propose an efficient approach to produce and control the quantum entanglement of three macroscopic coupled superconducting qubits. By conditionally rotating, one by one, selected Josephson charge qubits, we show that their Greenberger-Horne-Zeilinger (GHZ) entangled states can be deterministically generated. The existence of GHZ correlations between these qubits could be experimentally demonstrated by effective single-qubit operations followed by high-fidelity single-shot readouts. The possibility of using the prepared GHZ correlations to test the macroscopic conflict between the noncommutativity of quantum mechanics and the commutativity of classical physics is also discussed.
description: 4 Pages with 1 figure. to appear in Physical Review Letters
Influence of flow thickness on general relativistic low angular momentum accretion around spinning black holes
Creators: name: Tarafdar, Pratik
name: Maity, Susovan
name: Das, Tapas K.
Publisher: name: arXiv
Year: 2020
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: General relativistic, axisymmetric flow of low angular momentum accretion around a Kerr black hole can have certain geometric configuration where the flow is maintained in hydrostatic equilibrium along the vertical direction (direction orthogonal to the equatorial plane of the flow). The flow thickness for such accretion models becomes a function of the local radial distance measured from the black hole horizon. There are three types of functions defined in the literature which resemble the thickness of the flow for such a configuration. We formulate the equations governing the steady state astrophysical accretion characterized by both the polytropic as well as the isothermal equation of state in classical thermodynamics. We solve the equations within the framework of such geometric configuration for three different thickness functions, to obtain the multi-transonic, shocked, stationary integral accretion solutions. Such solutions enable us to study how flow thickness influences the dependence of the properties of post-shock flows on black hole spin angular momentum, i.e., the Kerr parameter. For temperature-preserving standings shocks, we find that the post-shock part of the disc can become luminous and considerable amount of gravitational energy carried by the accreting fluid can get liberated at the shock. We find which kind of thickness function produces the maximum liberated energy, making the disc most luminous.
description: 40 pages, 12 figures
Additional file 1 of Usefulness of tissue inhibitor of metalloproteinase 1 as a predictor of sustained remission in patients with antineutrophil cytoplasmic antibody-associated vasculitis
Creators: name: Ishizaki, Jun
name: Takemori, Ayako
name: Horie, Kenta
name: Hiraoka, Daisuke
name: Suemori, Koichiro
name: Matsumoto, Takuya
name: Ken-Ei Sada
name: Amano, Koichi
name: Harigai, Masayoshi
name: Arimura, Yoshihiro
name: Makino, Hirofumi
name: Katsuto Takenaka
name: Takemori, Nobuaki
name: Hasegawa, Hitoshi
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Cell Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Hematology
subject: 60506 Virology

description: Additional file 1: Supplementary Figure 1. Relationship between serum MMP-3 and CXCL13 levels and clinical outcomes from 6 to 18 months in the RemIT-JAV-RPGN study. Supplementary Figure 2. Relationship between serum MMP-3 and CXCL13 levels and clinical outcomes in the MAAV-EU study.
Perpetuation of subsistence farming in Western Balkans: the role of factor market imperfections
Creators: name: Latruffe, Laure
name: Davidova, Sophia
name: Desjeux, Yann
name: Latruffe, Laure
name: Davidova, Sophia
name: Desjeux, Yann
Publisher: name: Unknown
Year: 2008
Subjects: subject: subsistence farming
subject: agricultural households
subject: separability
subject: market imperfections
subject: Kosovo

description: The paper analyses the imperfections in output and factor markets in Kosovo that act as a barrier to farm commercialisation. On the one hand, agricultural households may not have access to output market due to an underdeveloped downstream sector. On the other, local producers might not be preferred to importers as their production level is small with a variable quality due to constraints in factor markets. Data from the Agricultural Household Survey 2005 are used. A conceptual framework is developed on the basis of a household model where non-separability results from a “wedge” between purchase and sale prices due to transaction costs. The share of the output sold in the total value of output is regressed over a set of explanatory variables. A truncated regression is employed due to the high percentage of the dependent variable having the value of zero. Many of the observations do not contain all three factor prices - land rent, wages and interest. For this reason three separate regressions are run, each containing one of the prices. The model including wages is non-separable. Households with more members sell less as they have preferences for household needs. This calls for active rural development and educational policy which can create labour opportunities for agricultural households.
Normal domination of (super)martingales
Creators: name: Pinelis, Iosif
Publisher: name: arXiv
Year: 2005
Subjects: subject: Probability (math.PR)
subject: FOS: Mathematics
subject: 60E15; 60J65; 60E05; 60G15; 60G50; 60J30

description: Let (S_0,S_1,...) be a supermartingale relative to a nondecreasing sequence of σ-algebras (H_{\le0},H_{\le1},...), with S_0\le0 almost surely (a.s.) and differences X_i:=S_i-S_{i-1}. Suppose that for every i=1,2,... there exist H_{\le(i-1)}-measurable r.v.'s C_{i-1} and D_{i-1} and a positive real number s_i such that C_{i-1}\le X_i\le D_{i-1} and D_{i-1}-C_{i-1}\le 2 s_i a.s. Then for all real t and natural n one has \E f_t(S_n)\le\E f_t(sZ), where f_t(x):=\max(0,x-t)^5, s:=\sqrt{s_1^2+...+s_n^2}, and Z is N(0,1). In particular, this implies P(S_n\ge x)\le c_{5,0}P(Z\ge x/s) for all x in \R, where c_{5,0}=5!(e/5)^5=5.699.... Results for \max_{0\le k\le n}S_k in place of S_n and for concentration of measure also follow.
description: 20 pages
Black holes as Andreev reflecting mirrors
Creators: name: Manikandan, Sreenath K.
name: Jordan, Andrew N.
Publisher: name: arXiv
Year: 2020
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: Superconductivity (cond-mat.supr-con)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We propose a microscopic quantum description for Hawking radiation as Andreev reflections, which resolves the quantum information paradox at black hole event horizons. The detailed microscopic analysis presented here reveals how a black hole, treated as an Andreev reflecting mirror, provides a manifestly unitary description of an evaporating black hole, expanding our previous analysis presented in [PRD 96, 124011 (2017), PRD 98, 124043 (2018)]; In our analogy, a black hole resolves the information paradox by accepting particles -- pairing them with the infalling Hawking quanta into a Bardeen-Cooper-Schrieffer (BCS) like quantum ground state -- while Andreev reflecting the quantum information as encoded in outgoing Hawking radiation. The present approach goes beyond the black hole final state proposal by Horowitz and Maldacena [JHEP 02, 008 (2004)], by providing necessary microscopic details which allows us to circumvent important shortcomings of the black hole final state proposal. We also generalize the present Hamiltonian description to make an analogy to the apparent loss of quantum information possible in an Einstein-Rosen bridge, via crossed Andreev reflections.
description: 13 pages, 2 figures
Additional file 1 of Evolutionary chemical binding similarity approach integrated with 3D-QSAR method for effective virtual screening
Creators: name: Prasannavenkatesh Durai
name: Ko, Young-Joon
name: Cheol-Ho Pan
name: Park, Keunwan
Publisher: name: figshare
Year: 2020
Subjects: subject: Biophysics
subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences

description: Additional file 1: Figure S1. The percentage of control (POC) and binding constant values of the final hits. For every inhibitor proved in biochemical assay, its binding constant (Kd in nM) and percentage of control (the lowest percentage of control or kinase in solid support confirms the competition between test molecule and immobilized molecule for binding to kinase) values are shown. Figure S2. The dose-response curve used to determine binding constants (Kd). The quantitative measurement by qPCR in y-axis and the corresponding chemical concentration (nM in log10 scale) in x-axis. The “x” mark in the plot represents the data points not used to calculate Kd. Figure S3. Diversity of confirmed kinases and binding assay results of WEE1. a The diversity of the chosen 3 kinases is shown with the phylogenetic tree of the human kinome. The figure is generated by KinMap website ( http://www.kinhub.org/kinmap/ ). b The output scores obtained from TS-ensECBS and PharmaDB screening for the molecules verified via the competitive binding assay for WEE1were shown. Figure S4. The experimental and predicted values of 3D-QSAR models. Training set molecules used to generate 3D-QSAR models by Hypogen algorithm with their rescaled competitive binding assay activity values and estimated activity values are shown. The given input activity values from binding assay were rescaled to the range of four orders of magnitude by Hypogen algorithm for better activity prediction. Hence the log values of activity and estimated activity are compared. Figure S5. The overview of RAS-directed RAF–MEK–ERK signaling pathway. Initiated by receptor tyrosine kinase RTKs, MEK1 and MEK2 are involved in the pathway for MAPK1/2 activity. This signaling regulates the cell growth where RAS binds to guanosine triphosphate (GTP) and prompts RAF or MEKK to phosphorylate and activate MEKs. Finally, MEKs phosphorylate and trigger ERKs via conserved threonine or tyrosine residues. Figure S6. The AUC values in Receiver operating characteristic for the virtual screening methods validated.
Can the CAP payments facilitate the growth of individual farms in the NMS post-EU accession?
Creators: name: Latruffe, Laure
name: Davidova, Sophia
name: Douarin, Elodie
name: Gorton, Matthew
name: Latruffe, Laure
name: Davidova, Sophia
name: Douarin, Elodie
name: Gorton, Matthew
Publisher: name: Unknown
Year: 2008
Subjects: subject: Single Area Payments (SAP)
subject: Common Agricultural Policy (CAP)
subject: credit
subject: Lithuania

description: The impact of the introduction of the EU Single Area Payments (SAP) on farm strategy is investigated for a sample of Lithuanian farms, utilising farm accounting and survey data. The applications of two investment models demonstrate that the credit market in Lithuania was imperfect prior to accession and that some farms were financially constrained. The introduction of the SAP has a significant, positive influence on farmers’ intentions to expand their farm area compared to a baseline scenario of the continuation of pre-accession policy. The switch in policy has a more pronounced effect on farms that were previously credit constrained. While the SAP has been presented as a policy support that is decoupled from production, its introduction will nevertheless have ex post coupled effects, most notably an income multiplier effect on credit constrained farmers.
Sciota lucipetella
Creators: name: Yepishin, Viktor
name: Bidzilya, Oleksiy
name: Budashkin, Yuriy
name: Zhakov, Oleksandr
name: Mushynskyi, Vadym
name: Novytskyi, Sergiy
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Pyralidae
Sciota
Sciota lucipetella

description: Sciota lucipetella (Jalava, 1978)
 Material examined: 1 ex., Chernihiv reg., Ripky distr., Lovyn, 24–25.vi.2016 (V. Mushynskyi) (VM).
 Distribution. S Finland, Estonia, Latvia, Denmark (Slamka 2019); Russia: N and C of European part, S Urals, S of W Siberia (Sinev et al. 2019); first record for Ukraine: Chernihiv region.
description: Published as part of Yepishin, Viktor, Bidzilya, Oleksiy, Budashkin, Yuriy, Zhakov, Oleksandr, Mushynskyi, Vadym & Novytskyi, Sergiy, 2020, New records of little known pyraloid moths (Lepidoptera: Pyraloidea) from Ukraine, pp. 101-120 in Zootaxa 4808 (1) on page 116, DOI: 10.11646/zootaxa.4808.1.5, http://zenodo.org/record/3927960
Additional file 1 of Epigenetic evidence of an Ac/Dc axis by VPA and SAHA
Creators: name: Lunke, Sebastian
name: Maxwell, Scott
name: Khurana, Ishant
name: Harikrishnan, K.N.
name: Okabe, Jun
name: Al-Hasani, Keith
name: El-Osta, Assam
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1: Table S1. Stimulation by VPA and SAHA identifies pathways from GSEA. Table S2. Statistical analysis of differential histone modifications associated with gene expression. Table S3. Association of TFBS with differential H3K9/14 acetylation