cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
BindingDB Entry 12272: Prodrugs of cytotoxic active agents having enzymatically cleavable groups
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: Kinesin-like protein KIF11, Bayer Aktiengesellschaft, Affinity

description: Small molecule binding data for protein Kinesin-like protein KIF11, Uniprot P52732
BindingDB Entry 12313: COVALENT HETEROCYCLES AND USES THEREOF
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: Tyrosine-protein kinase BTK [C481S], Kumquat Biosciences, Affinity

description: Small molecule binding data for protein Tyrosine-protein kinase BTK [C481S], Uniprot Q06187
BindingDB Entry 12312: FUSED TRI-CYCLIC COMPOUND AS A PDE3/PDE4 DUAL INHIBITOR
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: Cytochrome P450 1A2, Cytochrome P450 2C19, Cytochrome P450 2C9, Cytochrome P450 2D6, Cytochrome P450 3A4, cAMP-specific 3',5'-cyclic phosphodiesterase 4B, and cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A, Chia Tai Tianqing Pharmaceutical Group Co., Affinity

description: Small molecule binding data for protein Cytochrome P450 1A2, Cytochrome P450 2C19, Cytochrome P450 2C9, Cytochrome P450 2D6, Cytochrome P450 3A4, cAMP-specific 3',5'-cyclic phosphodiesterase 4B, and cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A, Uniprot P05177, P08684, P10635, P11712, P33261, Q07343, and Q14432
BindingDB Entry 12311: HETEROCYCLIC LACTAM COMPOUND, AND PREPARATION METHOD THEREFOR AND PHARMACEUTICAL USE THEREOF
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: Receptor-interacting serine/threonine-protein kinase 1, Genfleet Therapeutics (Shanghai), Affinity

description: Small molecule binding data for protein Receptor-interacting serine/threonine-protein kinase 1, Uniprot Q13546
BindingDB Entry 12310: PYRIDAZINONE COMPOUND AS PARP7 INHIBITOR
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: Poly [ADP-ribose] polymerase 1 and Protein mono-ADP-ribosyltransferase TIPARP, Euregen Biopharma Co., Affinity

description: Small molecule binding data for protein Poly [ADP-ribose] polymerase 1 and Protein mono-ADP-ribosyltransferase TIPARP, Uniprot P09874 and Q7Z3E1
BindingDB Entry 12309: USP9X Inhibitors
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: Probable ubiquitin carboxyl-terminal hydrolase FAF-X, Prodeg, Affinity

description: Small molecule binding data for protein Probable ubiquitin carboxyl-terminal hydrolase FAF-X, Uniprot Q93008
BindingDB Entry 12308: CXCR4-TARGETED DIAGNOSTIC AND THERAPEUTIC AGENTS WITH REDUCED SPECIES SELECTIVITY
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: C-X-C chemokine receptor type 4, Technische University Munchen, Affinity

description: Small molecule binding data for protein C-X-C chemokine receptor type 4, Uniprot O08565, P61073, and P70658
Land subsidence in Beijing: response to the joint influence of the South-to-North Water Diversion Project and ecological water replenishment, observed by satellite radar interferometry
Creators: name: Shi, Min
name: Gao, Mingliang
name: Chen, Zheng
name: Lyu, Mingyuan
name: Gong, Huili
name: Zhai, Yuanzheng
name: Pan, Yun
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: The South-to-North Water Diversion Project Middle Route (SNWD-MR) annually diverts hundreds of millions of cubic meters of water from the Danjiangkou Reservoir to Beijing, significantly impacting the regional groundwater cycle. To conserve water resources, the government has implemented ecological water replenishment (EWR) in some water systems. This study aimed to study the coupled process of groundwater dynamics and land subsidence (LS) in Yongding River (YDR) basin (Beijing section) following the implementation of the SNWD-MR and EWR. First, an Interferometric Synthetic Aperture Radar (InSAR) time series technique was used to detect spatial and temporal distributions of surface displacement between 2015 and 2020 based on satellite images from Sentinel-1A/B. The results indicated a predominant LS deceleration trend during the InSAR observation period. The area with subsidence velocity below 20 mm/yr decreased significantly by 18.6% after SNWD-MR and EWR (from 2016 to 2020). Then, groundwater level fluctuations during the InSAR observation period were analyzed using groundwater measurement well data. Over 60% of these wells showed a rebound in groundwater levels after the implementation of SNWD-MR and EWR. The polynomial distribution lag model (PDL) revealed the association between LS and groundwater level changes, depicting both short- and long-term lag effect. The results showed significant spatial and temporal heterogeneity on the short- and long-term response between groundwater level change and regional subsidence. In addition, we calculated the differential subsidence slope based on the InSAR-derived LS and analyzed its impact on the river slope after SNWD-MR and EWR. The results show that two sections with significant severe differential subsidence slope occur between 0 and 14,000 m and between 54,000 and 78,000 m along the YDR. The slope change caused by LS may reduce the conveyance capacity of surface canals, and more attention should be paid in those two sections. These findings have an important scientific significance for management strategy for LS control against the background of SNWD-MR and EWR.
Additional file 1: of Frequency of eating home cooked meals and potential benefits for diet and health: cross-sectional analysis of a population-based cohort study
Creators: name: Mills, Susanna
name: Brown, Heather
name: Wrieden, Wendy
name: White, Martin
name: Adams, Jean
Publisher: name: Figshare
Year: 2017
Subjects: subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy

description: This file provides requested information regarding how the sample was recruited, how representative the sample was of the target group, how the analysed sample differed from the recruited sample, and how missing data were handled. (DOCX 17 kb)
Hydraena (Holcohydraena) nigra Hatch
Creators: name: Perkins, Philip D.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Hydraenidae
Hydraena
Hydraena nigra

description: Hydraena (Holcohydraena) nigra Hatch
Hydraena vandykei niger Hatch, 1965:20
The new record below documents a new locality and a new depository for identified specimens of this species, which is found in the Sierra Nevada Mountains of California south to the San Gabriel Mountains and north to southern Oregon, and in the Rocky Mountains from southern British Columbia south to New Mexico. Identified specimens deposited in museum collections now number 118.
New record: Utah, Cache Co., Tony Grove Canyon, 30.vii.1974, leg. G. f. Knowlton (1 UGCA).
description: Published as part of Perkins, Philip D., 2023, New Neotropical and Nearctic species of water beetles in the genera Hydraena Kugelann and Ochthebius Leach, a key to North American genera and subgenera of the family, new distribution records, and a synopsis of ecology, behavior and morphology related to aquatic life (Coleoptera: Hydraenidae), pp. 1-86 in Zootaxa 5367 (1) on page 63, DOI: 10.11646/zootaxa.5367.1.1, http://zenodo.org/record/10145106
BindingDB Entry 12306: NAMPT ACTIVATORS FOR TREATING METABOLIC AND NEUROLOGICAL DISORDERS
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: Nicotinamide phosphoribosyltransferase, The Board of Trustees of The University of Illinois, Affinity

description: Small molecule binding data for protein Nicotinamide phosphoribosyltransferase, Uniprot P43490
Randomized Pharmacokinetic Crossover Study Comparing 2 Curcumin Preparations in Plasma and Rectal Tissue of Healthy Human Volunteers
Creators: name: Dossou, K.S.S
name: Moaddel, R
name: Asher, G.N
name: Kashuba, A.D.M
name: Sanghvi, M
name: Xie, Y
name: Hawke, R.L
name: Sandler, R.S
Publisher: name: The University of North Carolina at Chapel Hill University Libraries
Year: 2017

description: Curcumin is poorly absorbed, which is interest in new preparations. However, little is known about variations in its pharmacokinetics and tissue bioavailability between formulations. In this randomized, crossover study we evaluated the relationship between steady-state plasma and rectal tissue curcuminoid concentrations using standard and phosphatidylcholine curcumin extracts. There was no difference in the geometric mean plasma AUCs when adjusted for the 10-fold difference in curcumin dose between the 2 formulations. Phosphatidylcholine curcumin extract yielded only 20% to 30% plasma demethoxycurcumin and bisdemethoxycurcumin conjugates compared to standard extract, yet yielded 20-fold greater hexahydrocurcumin. When adjusting for curcumin dose, tissue curcumin concentrations were 5-fold greater for the phosphatidylcholine extract. Improvements in curcuminoid absorption due to phosphatidylcholine are not uniform across the curcuminoids. Furthermore, curcuminoid exposures in the intestinal mucosa are most likely due to luminal exposure rather than to plasma disposition. Finally, once-daily dosing is sufficient to maintain detectable curcuminoids at steady state in both plasma and rectal tissues.
BindingDB Entry 12305: NOVEL AZAINDOLE DERIVATIVES AS ANTIVIRAL AGENTS
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: Receptor-type tyrosine-protein kinase FLT3 and Tyrosine-protein kinase receptor UFO, Centre National de la Recherche Scientifique, Affinity

description: Small molecule binding data for protein Receptor-type tyrosine-protein kinase FLT3 and Tyrosine-protein kinase receptor UFO, Uniprot P30530 and P36888
Hydraena (Holcohydraena) occidentalis Perkins
Creators: name: Perkins, Philip D.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Hydraenidae
Hydraena
Hydraena occidentalis

description: Hydraena (Holcohydraena) occidentalis Perkins
Hydraena occidentalis Perkins 1980: 78
The new records below document two new localities, including the first record for Baja California, and a new depository for identified specimens of this species. The currently known distribution is from British Columbia, south thru Washington, Oregon and California to Baja California.
New records: U.S.A.: California: Orange Co., San Juan Canyon, 16.vii.1979, leg. C. N. McKinnon (1 TAMU); Mexico: Baja California, Sur, Sierra Laguna, La Laguna, 17 air mi. ENE Todos Santos!, 12–18.xii.1979, leg. J. Doyen & W. Tschinkel (3 MCZ).
description: Published as part of Perkins, Philip D., 2023, New Neotropical and Nearctic species of water beetles in the genera Hydraena Kugelann and Ochthebius Leach, a key to North American genera and subgenera of the family, new distribution records, and a synopsis of ecology, behavior and morphology related to aquatic life (Coleoptera: Hydraenidae), pp. 1-86 in Zootaxa 5367 (1) on page 63, DOI: 10.11646/zootaxa.5367.1.1, http://zenodo.org/record/10145106
MOESM2 of Immunohistochemical prognostic markers of esophageal squamous cell carcinoma: a systematic review
Creators: name: Chunni Wang
name: Jingnan Wang
name: Zhaoli Chen
name: Yibo Gao
name: He, Jie
Publisher: name: Figshare
Year: 2017
Subjects: subject: Cell Biology
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer

description: Additional file 2: Table S2. Assessment of prognostic biomarker studies for risk of bias using the â  Quality Assessment in Prognostic studiesâ   (QUIPS) tool.
BindingDB Entry 12304: PROTEASE INHIBITORS AND METHODS OF USE
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: Replicase polyprotein 1ab, The Cleveland Clinic Foundation, Affinity

description: Small molecule binding data for protein Replicase polyprotein 1ab, Uniprot A0A679G4D8, A0A6B9V049, A0A6B9VP19, A0A6V7ALW7, and P0DTD1
Two-tier classification framework for mapping grassland types using multisource earth observation data
Creators: name: Zhang, Min
name: Yu, Wenzheng
name: Chen, Ang
name: Xu, Cong
name: Guo, Jian
name: Xing, Xiaoyu
name: Yang, Dong
name: Wang, Zichao
name: Yang, Xiuchun
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Space Science
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Plant Biology

description: The dynamic changes in grassland types are crucial for conserving grassland biodiversity, conducting comprehensive health assessments, and gaining insights into ecosystem evolution. However, accurately mapping grassland types remains an ongoing challenge, especially over large areas. In response, we developed a hierarchical classification framework using random forest to tackle this task. This framework was structured into two tiers: land cover (LC) classification and grassland-type mapping, with each tier using specific features tailored to its respective objectives. In this framework, LC samples were automatically generated using existing LC products combined with vegetation indices and phenological features. We fused spectral information, phenological features, and habitat factors such as topographic indices, soil, and climate from multisource earth observation (EO) data to enhance grassland-type mapping performance. This framework successfully generated distribution maps of grassland types on the Qinghai Plateau for the years 1990–2020. Our findings revealed the following: (1) Using the two-tier classification framework and fusing multisource features, an ideal distribution map of grassland types was obtained, with a macro-average F1 score (F1) of 91% and an overall accuracy (OA) of 96%; (2) Compared to a one-shot classification framework, the two-tier classification framework achieved higher accuracy, with F1 and OA increasing by 11% and 7%, respectively; (3) Climate, topographical, soil, and phenological features assisted in distinguishing grassland types with similar spectral characteristics, especially for zonal grasslands. Adding these features increased F1 by 21%, 10%, 7%, and 3%, respectively, while OA increased by 9%, 5%, 5%, and 2%, respectively. Among these features, relative humidity, total precipitation from May to September, geographic coordinates, and elevation had the greatest effect on grassland type differentiation. June and July were the optimal phenological periods for mapping; (4) Over the 30-year period, the grasslands on the Qinghai Plateau showed an expanding trend, with extensive areas of alpine steppes transforming into alpine meadows. The results of this study provide the first elucidation of grassland-type changes across the Qinghai Plateau from 1990 to 2020. Moreover, they underscore the potential of hierarchical classification frameworks and the integration of multisource EO data in mapping grassland-type distribution.
BindingDB Entry 12303: Cysteine protease inhibitors and methods of use thereof
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: Replicase polyprotein 1a, Anixa Biosciences, Affinity

description: Small molecule binding data for protein Replicase polyprotein 1a, Uniprot P0DTC1
BindingDB Entry 12302: Substituted imidazoles for the inhibition of TGF-β and methods of treatment
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: TGF-beta receptor type-1, Clavius Pharmaceuticals, Affinity

description: Small molecule binding data for protein TGF-beta receptor type-1, Uniprot P36897
BindingDB Entry 12301: Imidazopyridinone compound
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: Egl nine homolog 1 [184-418], Kissei Pharmaceutical Co., Affinity

description: Small molecule binding data for protein Egl nine homolog 1 [184-418], Uniprot Q9GZT9
Hydraena (Holcohydraena) pacifica Perkins
Creators: name: Perkins, Philip D.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Hydraenidae
Hydraena
Hydraena pacifica

description: Hydraena (Holcohydraena) pacifica Perkins
Hydraena pacifica Perkins 1980: 87
The new records below document new localities and two new depositories for identified specimens of this species, which is widely distributed throughout western North America.
New records: Canada: British Columbia, Spanish Hills, Galiano Is., 20.iv.1975, leg. G. G. E. Scudder (16 UBC);, Jericho Park, Main Pond, West end, (49°16’15.5’’N, 123°11’41.8’’W), 10.xi.2008, leg. R. D. Kenner (19 UBC); Oregon, Lincoln Co., 2 mi. E Waldport, 15.v.1983, leg. D. S. Chandler (2 UNH); Wyoming, Natrona Co., Bates Creek, 22 mi. S. Casper, 7.viii.1963, leg. R. E. White (1 MCZ).
description: Published as part of Perkins, Philip D., 2023, New Neotropical and Nearctic species of water beetles in the genera Hydraena Kugelann and Ochthebius Leach, a key to North American genera and subgenera of the family, new distribution records, and a synopsis of ecology, behavior and morphology related to aquatic life (Coleoptera: Hydraenidae), pp. 1-86 in Zootaxa 5367 (1) on page 63, DOI: 10.11646/zootaxa.5367.1.1, http://zenodo.org/record/10145106
Leptotrombidium (Leptotrombidium) kalrai , Vercammen-Grandjean & Langston 1976
Creators: name: Nielsen, David H.
name: Robbins, Richard G.
name: Rueda, Leopoldo M.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Actinedida
Trombiculidae
Leptotrombidium
Leptotrombidium kalrai

description: Leptotrombidium (Leptotrombidium) kalrai (Radford, 1953a):
AUS
Trombicula kalrai Radford, 1953 a
Leptotrombidium (Leptotrombidium) kalrai, Vercammen-Grandjean & Langston 1976
Leptotrombidium kalrai, Stekolnikov 2013 [dux group]
description: Published as part of Nielsen, David H., Robbins, Richard G. & Rueda, Leopoldo M., 2021, Annotated world checklist of the Trombiculidae and Leeuwenhoekiidae (1758 - 2021) (Acari: Trombiculoidea), with notes on nomenclature, taxonomy, and distribution, pp. 1-243 in Zootaxa 4967 (1) on page 131, DOI: 10.11646/zootaxa.4967.1.1, http://zenodo.org/record/4745510
BindingDB Entry 12300: Process route of compound of formula (IV), crystal form and preparation method therefor
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: Retina-specific copper amine oxidase, Shandong Danhong Pharmaceutical Co., Affinity

description: Small molecule binding data for protein Retina-specific copper amine oxidase, Uniprot O75106
BindingDB Entry 12299: Indane derivatives as hypoxia inducible factor-2(α) inhibitors
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: Vascular endothelial growth factor A, Nikang Therapeutics, Affinity

description: Small molecule binding data for protein Vascular endothelial growth factor A, Uniprot P15692
Hydraena (Holcohydraena) punctata LeConte
Creators: name: Perkins, Philip D.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Hydraenidae
Hydraena
Hydraena punctata

description: Hydraena (Holcohydraena) punctata LeConte
Hydraena punctata LeConte, 1855: 362
The new records below document new localities and first records for Oklahoma and Virginia. The currently known distribution is eastern U.S.A., from Massachusetts southward to Virginia, and west to Oklahoma.
New records: U.S.A.: Oklahoma, Latimer Co., 5 mi. W. Red Oak, 1.v.–1.xii.1980, leg. K. H. Stephan (9 MCZ); same locality, 1–30.ix.1980, leg. K. H. Stephan (3 MCZ); Virginia, Bath Co., Indian Draft, 12 mi. S. Williiamsville, 27.viii.1993, leg. S. Croy, J. Jacobs, P. Perkins, S. Roble (1 MCZ); Proctor Draft at Rt. 663 crossing, (38°1’20’’N, 79°36’59’’E), 28.ix.2006, leg. D. Kirk & F. Huber (1 MCZ).
description: Published as part of Perkins, Philip D., 2023, New Neotropical and Nearctic species of water beetles in the genera Hydraena Kugelann and Ochthebius Leach, a key to North American genera and subgenera of the family, new distribution records, and a synopsis of ecology, behavior and morphology related to aquatic life (Coleoptera: Hydraenidae), pp. 1-86 in Zootaxa 5367 (1) on page 64, DOI: 10.11646/zootaxa.5367.1.1, http://zenodo.org/record/10145106
Liropus Mayer 1890
Creators: name: Alarcón-Ortega, Lucy C.
name: Carballo, José L.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Amphipoda
Caprellidae
Liropus

description: Genus Liropus Mayer, 1890
Include species. The genus Liropus includes 14 recognized species worldwide: L. africanus Mayer, 1920; L. azorensis Guerra-García, 2004; L. cachuchoensis Guerra-García, Sorbe & Frutos, 2008; L. elongatus Mayer, 1890; L. gracilis Chevreaux, 1927; L. guerragarciai Mauro & Serejo, 2015; L. gurui Guerra-García, Chatterjee & Schizas, 2015; L. isabelensis Sánchez-Moyano, García-Asencio & Guerra-García, 2015; L. japonicus Mori, 1995; L. minimus Mayer, 1890; L. minusculus Guerra-García & Hendrycks, 2013; L. nelsonae Guerra-García, 2003; L. vitucoi Guerra-García, Tato & Moreira, 2018 and L. willyi Guerra-García, Tato & Moreira, 2018.
description: Published as part of Alarcón-Ortega, Lucy C. & Carballo, José L., 2022, Description of a new species of Liropus (Crustacea, Amphipoda) from Puerto Vallarta, Pacific coast of Mexico, pp. 528-536 in Zootaxa 5154 (5) on pages 529-530, DOI: 10.11646/zootaxa.5154.5.2, http://zenodo.org/record/6655447
BindingDB Entry 12298: Benzamide and active compound compositions and methods of use
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: Histone deacetylase 1, Histone deacetylase 3, Histone deacetylase 6, and Polyamine deacetylase HDAC10, Translational Drug Development, Affinity

description: Small molecule binding data for protein Histone deacetylase 1, Histone deacetylase 3, Histone deacetylase 6, and Polyamine deacetylase HDAC10, Uniprot O15379, Q13547, Q969S8, and Q9UBN7
Deep learning-based mapping of total suspended solids in rivers across South Korea using high resolution satellite imagery
Creators: name: Moon, JunGi
name: Suh, SungMin
name: Jung, SangJin
name: Baek, Sang-Soo
name: Pyo, JongCheol
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Environmental Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Managing total suspended solids (TSS) in inland water is crucial for maintaining water quality and aquatic ecosystems. To obtain spatial data, the conventional method of point sampling TSS is a time- and labor-intensive task. Thus, recent efforts have focused on using satellite imagery to estimate TSS. Previous studies have used empirical method and machine learning model with multispectral satellite bands; however, these are limited to specific study areas and the amount of data is insufficient. This study aimed to build a generalized estimating model that can generally estimate the spatial and temporal variations in TSS concentrations in an extensive region by integrating the Water Quality Monitoring System with Sentinel-2 satellite observations using deep learning algorithms. This would provide comprehensive coverage of continental terrain, enabling consistent acquisition of satellite data and computation of the TSS across four major rivers in South Korea. Deep learning algorithms can generally estimate TSS concentrations over large areas. We found that the convolutional neural network (CNN) model was more accurate than traditional regression and other models, with a Nash-Sutcliffe efficiency (NSE) of 0.758. These findings indicate that it is possible to estimate TSS concentrations in ungauged areas, allowing the acquisition of extensive and continuous spatiotemporal datasets for organic micropollutants. This would be of great assistance in monitoring micropollutants in the four major rivers in South Korea.
RE: Colorectal Cancer Incidence Patterns in the United States, 1974–2013
Creators: name: Sandler, R.S
name: Sanoff, H.K
name: Yang, Y.C
name: Lund, J.L
name: Stitzenberg, K.B
name: Murphy, C.C
name: Baron, J.A
Publisher: name: Oxford University Press
Year: 2017

description: In the latest issue of the Journal, Siegel et al. report that young adults born around 1990 (and so currently age 20 to 29 years) have double and quadruple the risk of colon and rectal cancer (CRC), respectively, compared with the same age group born in 1950. We believe presenting relative increases in incidence isolated from the absolute risk of CRC in younger adults can be misleading. Using relative or ratio measures to communicate risk of young-onset CRC may lead the casual reader or popular press to misinterpret the extent to which incidence is increasing.
Hydraena (Holcohydraena) quadricurvipes Perkins
Creators: name: Perkins, Philip D.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Hydraenidae
Hydraena
Hydraena quadricurvipes

description: Hydraena (Holcohydraena) quadricurvipes Perkins
Hydraena quadricurvipes Perkins 1980: 93
The new records below document new localities and a new depository for identified specimens of this very rarely collected species, which is presently known from the states of Alabama, Georgia, Indiana, and Maryland. The new records raise the number of specimens in museum collections from nine to 15.
New records: U.S.A.: Indiana, Monroe Co., Morgan-Monroe State Forest, 29.vii.1961, leg. J. C. Schaffner (5 TAMU); Parke Co., 4 mi. W. of Rockville (“Hajji Hollow”), 1.vi.–30.ix.1975, leg. H. S. Dybas (1 FMNH).
description: Published as part of Perkins, Philip D., 2023, New Neotropical and Nearctic species of water beetles in the genera Hydraena Kugelann and Ochthebius Leach, a key to North American genera and subgenera of the family, new distribution records, and a synopsis of ecology, behavior and morphology related to aquatic life (Coleoptera: Hydraenidae), pp. 1-86 in Zootaxa 5367 (1) on page 64, DOI: 10.11646/zootaxa.5367.1.1, http://zenodo.org/record/10145106
The identification and efficiency evaluation of industrial parcels by integrating multi-source spatial data in Shenzhen, South China
Creators: name: Wang, Danyang
name: Huang, Xianjin
name: Shi, Lifeng
name: Yang, Hong
name: Sun, Weidong
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Space Science
subject: Physical Sciences not elsewhere classified
subject: Medicine
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Industrial land status, encompassing quantity, distribution and efficiency, is pivotal in urban planning and sustainable development. However, obtaining detailed and up-to-date industrial land maps poses a significant challenge in many developing countries due to rapid urban expansion. Furthermore, the identification and efficiency assessment of industrial land at the parcel scale are rarely undertaken. To address these challenges, our study proposes an innovative approach to map industrial land, categorize its types and assess its efficiency at the parcel scale. We select Shenzhen, one of China’s largest industrial cities, as a case study to demonstrate the effectiveness of our method. Our results unveil several key findings: (1) Shenzhen’s urban area was meticulously segmented into 15,591 multi-size socio-economic parcels, of which 5,738 were identified as industrial parcels (IPs); (2) IPs were further categorized into three distinct types: office industrial parcels at 69.47%, manufacturing industrial parcels at (6.08%) and comprehensive industrial parcels at 24.45%; (3) Their efficiency was classified into four levels: low (20.30%), middle (35.73%), fine (35.97%) and high (8.00%). Efficient IPs were predominately concentrated in the southwest, whereas other IPs clustered in the northwest. Our findings can provide valuable insights into industrial land identification, classification and efficiency evaluation at parcel scale.
Plasma lipoxin A4 and resolvin D1 are not associated with reduced adenoma risk in a randomized trial of aspirin to prevent colon adenomas
Creators: name: Fedirko, V
name: Robertson, D.J
name: Bresalier, R.S
name: Figueiredo, J.C
name: Ahnen, D.J
name: McKeown-Eyssen, G
name: Barry, E.L
name: Serhan, C.N
name: Anderson, C.W
name: Baron, J.A
name: Sandler, R.S
Publisher: name: John Wiley and Sons Inc.
Year: 2017

description: Inflammation plays a major role in colon carcinogenesis. Endogenously produced specialized proresolving lipid mediators (SPMs) play a central role in inflammation and tissue homeostasis, and have been implicated in carcinogenesis. We studied the associations of plasma levels of two SPMs [lipoxin A4 (LXA4) and resolvin D1(RvD1)] with risk for recurrent adenoma. In this pilot study, we used data and biosamples from an adenoma chemoprevention study investigating the effects of aspirin and/or folic acid on the occurrence of colorectal adenomas. In the parent study, 1121 participants with a recent adenoma were randomized to study agents to be taken until the next surveillance colonoscopy about 3 years later. In this pilot study, LXA4 and RvD1 from samples taken near the end of study treatment were measured in a randomly selected sub-set of 200 participants. Commercially available ELISA kits to assay the analytes were validated using a metabololipidomic LC-MS/MS assay. Poisson regression with a robust error variance was used to calculate risk ratios and 95% confidence intervals. Plasma LXA4 and RvD1 were not associated with the risk of adenoma occurrence. LXA4 at the end of study follow-up was 32% (P = 0.01) proportionately higher in women compared to men. A similar non-significant trend toward higher levels among women was observed for RvD1. Our preliminary findings provided no evidence that plasma LXA4 or RvD1 are associated with reduced risk of colorectal adenoma occurrence, but suggest LXA4 may differ among men and women. Future studies focusing on SPM's local effects and levels in the colon are needed.
BindingDB Entry 12297: Diarylpyrazole compound, composition comprising same, and use thereof
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: RAF proto-oncogene serine/threonine-protein kinase, Serine/threonine-protein kinase B-raf, and Serine/threonine-protein kinase B-raf [V600E], Shenzhen Targetrx, Affinity

description: Small molecule binding data for protein RAF proto-oncogene serine/threonine-protein kinase, Serine/threonine-protein kinase B-raf, and Serine/threonine-protein kinase B-raf [V600E], Uniprot P04049 and P15056
Hydraena (Hydraenopsis) arizonica Perkins
Creators: name: Perkins, Philip D.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Hydraenidae
Hydraena
Hydraena arizonica

description: Hydraena (Hydraenopsis) arizonica Perkins
Hydraena arizonica Perkins 1980: 108
The new record below documents a new collection record and a new depository for identified specimens of this species, which is presently known from 50 specimens collected in the mountains of southeastern Arizona and Durango, Mexico.
New record: U.S.A.: Arizona, Cochise Co., Rustler’s Park, Chiricahua Mountains, (31°54’N, 109°17’W), 4.viii.2003, leg. A. E. Z. Short (AS-03-037) (2 MCZ).
description: Published as part of Perkins, Philip D., 2023, New Neotropical and Nearctic species of water beetles in the genera Hydraena Kugelann and Ochthebius Leach, a key to North American genera and subgenera of the family, new distribution records, and a synopsis of ecology, behavior and morphology related to aquatic life (Coleoptera: Hydraenidae), pp. 1-86 in Zootaxa 5367 (1) on page 64, DOI: 10.11646/zootaxa.5367.1.1, http://zenodo.org/record/10145106
BindingDB Entry 12296: NITROGEN-CONTAINING HETEROCYCLIC COMPOUND, PREPARATION METHOD THEREFOR, AND APPLICATION THEREOF IN MEDICINES
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: Poly [ADP-ribose] polymerase 1 and Poly [ADP-ribose] polymerase 2, Jiangsu Hengrui Pharmaceuticals Co., Affinity

description: Small molecule binding data for protein Poly [ADP-ribose] polymerase 1 and Poly [ADP-ribose] polymerase 2, Uniprot P09874 and Q9UGN5
Cross attention is all you need: relational remote sensing change detection with transformer
Creators: name: Lu, Kaixuan
name: Huang, Xiao
name: Xia, Ruiheng
name: Zhang, Pan
name: Shen, Junping
Publisher: name: Taylor & Francis
Year: 2024
Subjects: Space Science
Cell Biology
Biological Sciences not elsewhere classified
Information Systems not elsewhere classified
Cancer

description: Deep-learning-based change detection methods have received wide attention, thanks to their strong capability in obtaining rich features from images. However, existing AI-based change detection (CD) methods largely rely on three functionality-enhancing modules, that is, semantic enhancement, attention mechanisms, and correspondence enhancement. The stacking of these modules leads to great model complexity. To unify these three modules into a simple pipeline, we introduce relational change detection transformer (RCDT), a novel and simple framework for remote sensing change detection tasks. The proposed RCDT consists of three major components, a weight-sharing Siamese Backbone to obtain bi-temporal features, a relational cross attention module (RCAM) that implements offset cross attention to obtain bi-temporal relation-aware features, and a features constrain module (FCM) to achieve the final refined predictions with high-resolution constraints. Extensive experiments on four different publicly available datasets suggest that our proposed RCDT exhibits superior change detection performance and great trade-off between performance and complexity compared with other competing methods. The theoretical, methodological, and experimental knowledge of this study is expected to benefit future change detection efforts that involve the cross attention mechanism.
Functional health literacy, chemotherapy decisions, and outcomes among a colorectal cancer cohort
Creators: name: Busch, E.L
name: Martin, C
name: DeWalt, D.A
name: Sandler, R.S
Publisher: name: The University of North Carolina at Chapel Hill University Libraries
Year: 2015

description: Background: Functional health literacy is essential for the self-management of chronic diseases and preventive health behaviors. Patients with cancer who have a low level of health literacy may be at greater risk for poor care and poor outcomes.Methods: We assessed health literacy using the Short Test of Functional Health Literacy in Adults in 347 participants with colorectal cancer who were nested within a prospective observational study of system, health care provider, and participant characteristics influencing cancer outcomes.Results: Having adequate health literacy increased the likelihood that participants with stage 3/4 disease received chemotherapy (odds ratio, 3.29; 95% confidence interval, 1.23–8.80) but had no effect on cancer stage at diagnosis or vital status at last observation during postenrollment follow-up. No difference was seen in health literacy status regarding participant beliefs and preferences about chemotherapy among those with stage 3/4 disease, nor in participant roles in deciding whether to receive chemotherapy.Conclusions: Patients with lower levels of health literacy were less likely to receive chemotherapy compared with participants with higher levels of health literacy. Therefore, clear communication related to key health care decisions may lead to fewer disparities due to a patient’s level of health literacy.
BindingDB Entry 12294: NEW BENZODIAZEPINE DERIVATIVES AS GABA A GAMMA1 PAM
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: Gamma-aminobutyric acid receptor subunit alpha-1/beta-3/gamma-2, Gamma-aminobutyric acid receptor subunit alpha-2/beta-2/gamma-1, and Gamma-aminobutyric acid receptor subunit alpha-5/beta-2/gamma-1, Hoffmann-La Roche, Affinity

description: Small molecule binding data for protein Gamma-aminobutyric acid receptor subunit alpha-1/beta-3/gamma-2, Gamma-aminobutyric acid receptor subunit alpha-2/beta-2/gamma-1, and Gamma-aminobutyric acid receptor subunit alpha-5/beta-2/gamma-1, Uniprot P14867, P18507, P28472, P31644, P47869, P47870, and Q8N1C3
Hydraena (Hydraenopsis) bituberculata Perkins
Creators: name: Perkins, Philip D.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Hydraenidae
Hydraena
Hydraena bituberculata

description: Hydraena (Hydraenopsis) bituberculata Perkins
Hydraena bituberculata Perkins 1980: 109
The new record below documents a new collection record and a new depository for identified specimens of this species, which is presently known from 54 total specimens collected in the mountains in Cochise County, Arizona and Dona Ana County, New Mexico.
New record: U.S.A.: Arizona, Cochise Co., Coronado Nat. For., Chiricahua Mtns., 7 mi. W. S.W.R.S., 12.viii.1974, leg. R. M. Duffield (1 MCZ).
description: Published as part of Perkins, Philip D., 2023, New Neotropical and Nearctic species of water beetles in the genera Hydraena Kugelann and Ochthebius Leach, a key to North American genera and subgenera of the family, new distribution records, and a synopsis of ecology, behavior and morphology related to aquatic life (Coleoptera: Hydraenidae), pp. 1-86 in Zootaxa 5367 (1) on page 64, DOI: 10.11646/zootaxa.5367.1.1, http://zenodo.org/record/10145106
BindingDB Entry 12293: 6-AMINOPYRAZOLOPYRIMIDINE COMPOUND AND PHARMACEUTICAL USE THEREOF
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: NACHT, LRR and PYD domains-containing protein 3, Japan Tobacco, Affinity

description: Small molecule binding data for protein NACHT, LRR and PYD domains-containing protein 3, Uniprot Q96P20
Additional file 1: of Comparative studies on tolerance of rice genotypes differing in their tolerance to moderate salt stress
Creators: name: Li, Qian
name: Yang, An
name: Zhang, Wen-Hao
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Plant Biology

description: Figure S1. Effects of salt stress on Dongdao-4 and Jigeng-88 seedlings. (a) Seedling growth performance, (b) Plant height, (c) Dry shoot biomass. Three-week-old rice seedlings grown in normal culture solution were transferred to culture solution supplemented with 20 mM NaCl for one day, and 40 mM NaCl for one day, and then exposed to 60 mM NaCl for one week. Bars, 10 cm. Data are means ±SE (n ≥ 4). Means with different letters are significantly different (P
Hydraena (Hydraenopsis) campbelli Perkins
Creators: name: Perkins, Philip D.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Hydraenidae
Hydraena
Hydraena campbelli

description: Hydraena (Hydraenopsis) campbelli Perkins
Hydraena campbelli Perkins 1980: 132 The new record below documents a new locality, a first record for Belize, and a new depository for identified specimens of this very rarely collected species. Only 15 specimens are known, 14 collected at the type-locality in the mountains of Chiapas, Mexico, and one in Belize.
New record: Belize: Toledo District, Columbia Forest Reserve, Edwards Central, (16°20’24.7’’N, 89°9’9.7’’W), 9–17.viii.2006, leg. P. W. Kovarik (1 MCZ).
description: Published as part of Perkins, Philip D., 2023, New Neotropical and Nearctic species of water beetles in the genera Hydraena Kugelann and Ochthebius Leach, a key to North American genera and subgenera of the family, new distribution records, and a synopsis of ecology, behavior and morphology related to aquatic life (Coleoptera: Hydraenidae), pp. 1-86 in Zootaxa 5367 (1) on pages 64-65, DOI: 10.11646/zootaxa.5367.1.1, http://zenodo.org/record/10145106
BindingDB Entry 12292: NAPHTHYRIDONE COMPOUNDS FOR INHIBITION OF RAF KINASES AND/OR BCR-ABL TYROSINE KINASES
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: ABL1, E255K, E255V, F317I, F317L, G250E, H396P, M351T, Q252H, T351I, V299L, Y253F, and Y253H, Enliven, Affinity

description: Small molecule binding data for protein ABL1, E255K, E255V, F317I, F317L, G250E, H396P, M351T, Q252H, T351I, V299L, Y253F, and Y253H, Uniprot P00519
Mapping the tidal marshes of coastal Virginia: a hierarchical transfer learning approach
Creators: name: Lv, Zhonghui
name: Nunez, Karinna
name: Brewer, Ethan
name: Runfola, Dan
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Ecology
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Plant Biology

description: Coastal wetlands, especially tidal marshes, play a crucial role in supporting ecosystems and slowing shoreline erosion. Accurate and cost-effective identification and classification of various marsh types, such as high and low marshes, are important for effective coastal management and conservation endeavors. However, mapping tidal marshes is challenging due to heterogeneous coastal vegetation and dynamic tidal influences. In this study, we employ a deep learning segmentation model to automate the identification and classification of tidal marsh communities in coastal Virginia, USA, using seasonal, publicly available satellite and aerial images. This study leverages the combined capabilities of Sentinel-2 and National Agriculture Imagery Program (NAIP) imagery and a UNet architecture to accurately classify tidal marsh communities. We illustrate that by leveraging features learned from data abundant regions and small quantities of high-quality training data collected from the target region, an accuracy as high as 88% can be achieved in the classification of marsh types, specifically high marsh and low marsh, at a spatial resolution of 0.6 m. This study contributes to the field of marsh mapping by highlighting the potential of combining multispectral satellite imagery and deep learning for accurate and efficient marsh type classification.
Leptotrombidium (Leptotrombidium) kawamurai
Creators: name: Nielsen, David H.
name: Robbins, Richard G.
name: Rueda, Leopoldo M.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Actinedida
Trombiculidae
Leptotrombidium
Leptotrombidium kawamurai

description: Leptotrombidium (Leptotrombidium) kawamurai (Fukuzumi and Obata, 1953):
PAL
Trombicula (Leptotrombidium) kawamurai Fukuzumi and Obata, 1953
Leptotrombidium (Leptotrombidium) kawamurai, Vercammen-Grandjean & Langston 1976
Leptotrombidium kawamurai, Stekolnikov 2013 [5 group]
description: Published as part of Nielsen, David H., Robbins, Richard G. & Rueda, Leopoldo M., 2021, Annotated world checklist of the Trombiculidae and Leeuwenhoekiidae (1758 - 2021) (Acari: Trombiculoidea), with notes on nomenclature, taxonomy, and distribution, pp. 1-243 in Zootaxa 4967 (1) on pages 131-132, DOI: 10.11646/zootaxa.4967.1.1, http://zenodo.org/record/4745510
BindingDB Entry 12291: COMPOUNDS AND RADIOLIGANDS FOR TARGETING NEUROTENSIN RECEPTOR AND USES THEREOF
Creators: name: BindingDB
Publisher: name: BindingDB
Year: 2024
Subjects: Neurotensin receptor type 1, Full-Life Technologies HK, Affinity

description: Small molecule binding data for protein Neurotensin receptor type 1, Uniprot P30989
Hydraena (Hydraenopsis) canticacollis Perkins
Creators: name: Perkins, Philip D.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Hydraenidae
Hydraena
Hydraena canticacollis

description: Hydraena (Hydraenopsis) canticacollis Perkins
Hydraena canticacollis Perkins 1980: 113
The new records below document two new localities and a new depository for identified specimens of this very rarely collected species. Only 11 identified specimens are now known for this species, which seems to be restricted to Zacatecas, Mexico.
New records: Mexico: Zacatecas, Teul de Gonzalez Ortega, Arroyo Hondo, (21°18’2’’N, 103°35’56’’W), 31.i.2004, leg. J. L. Navarrete-Heredia & J. Cortes-Aguilar (4 UGC); Teul de Gonzalez Ortega, camino a Milpillas, Arroyo Patitos, (21°21’4’’N, 103°34’W), 6.ii.2004, leg. J. Cortes-Aguilar & J. L. Navarrete-Heredia (6 UGC).
description: Published as part of Perkins, Philip D., 2023, New Neotropical and Nearctic species of water beetles in the genera Hydraena Kugelann and Ochthebius Leach, a key to North American genera and subgenera of the family, new distribution records, and a synopsis of ecology, behavior and morphology related to aquatic life (Coleoptera: Hydraenidae), pp. 1-86 in Zootaxa 5367 (1) on page 65, DOI: 10.11646/zootaxa.5367.1.1, http://zenodo.org/record/10145106
Evaluation of the Patient-Reported Outcomes Measurement Information System in a Large Cohort of Patients With Inflammatory Bowel Diseases
Creators: name: Lewis, J.D
name: Martin, C
name: Kappelman, M.D
name: Chen, W
name: DeWalt, D.A
name: Kinneer, P.M
name: Long, M.D
name: Sandler, R.S
Publisher: name: The University of North Carolina at Chapel Hill University Libraries
Year: 2014

description: Background and Aims: Patient-reported outcomes (PROs) convey important aspects of health status, complementing physician-reported measures. The PRO Measurement Information System (PROMIS) provides valid, widely available measures applicable to patients with chronic illness and the general population. We sought to evaluate these measures in a large cohort of patients with inflammatory bowel disease (IBD). Methods: By using data from the Crohn's and Colitis Foundation Association Partners internet cohort, we performed cross-sectional and longitudinal analyses to evaluate associations between PROMIS measures and validated disease activity indices (Short Crohn's Disease Activity Index and Simple Clinical Colitis Activity Index) and the Short IBD Questionnaire quality-of-life instrument. Results: A total of 10,634 individuals (6689 with Crohn's disease and 3945 with ulcerative colitis or indeterminate colitis) completed PRO testing. Compared with the general population (mean PROMIS score, 50), IBD patients in this cohort reported more depression (mean, 54), anxiety (mean, 52), fatigue (mean, 56), sleep disturbance (mean, 52), and pain interference (mean, 53); and they had less social satisfaction (mean, 48). In each PROMIS domain, there was worse functioning with increasing levels of disease activity and worsening Short IBD Questionnaire scores (P < .001 for all). Longitudinal analyses showed improved PROMIS scores with improved disease activity and worsening PROMIS scores with worsening disease (P < .001 for all comparisons). Conclusions: In a cross-sectional and longitudinal study, we observed differences between patients with IBD and the general population in several important aspects of health. The improvement in diverse health outcome measures with improved disease control provides strong support for the construct validity of PROMIS measures in the IBD population. Their use should advance patient-centered outcomes research in IBD.