cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Covalency versus magnetic axiality in Nd molecular magnets: Nd-photoluminescence, strong ligand-field, and unprecedented nephelauxetic effect in fullerenes NdM2N@C80 (M = Sc, Lu, Y)
Creators: name: Yang, Wei
name: Rosenkranz, Marco
name: Velkos, Georgios
name: Ziegs, Frank
name: Dubrovin, Vasilii
name: Schiemenz, Sandra
name: Spree, Lukas
name: De Souza Barbosa, Matheus Felipe
name: Guillemard, Charles
name: Valvidares, Manuel
name: Büchner, Bernd
name: Liu, Fupin
name: Avdoshenko, Stanislav M.
name: Popov, Alexey A.
Publisher: name: Cambridge : RSC
Year: 2023
Subjects: subject: Bond length
subject: Fullerenes
subject: Ligands
subject: Magnetic fields
subject: Neodymium compounds
subject: Photoluminescence
subject: Quantum theory
subject: Rare earths
subject: Single crystals
subject: X ray diffraction
subject: Clusterfullerenes
subject: Covalencies
subject: Different sizes
subject: Internal strains
subject: Ligand-field
subject: Molecular magnet
subject: Nephelauxetic effect
subject: Rare earth metals
subject: Rare-earth metals
subject: Synthesised
subject: Nitrides
subject: 540

description: Nd-based nitride clusterfullerenes NdM2N@C80 with rare-earth metals of different sizes (M = Sc, Y, Lu) were synthesized to elucidate the influence of the cluster composition, shape and internal strain on the structural and magnetic properties. Single crystal X-ray diffraction revealed a very short Nd-N bond length in NdSc2N@C80. For Lu and Y analogs, the further shortening of the Nd-N bond and pyramidalization of the NdM2N cluster are predicted by DFT calculations as a result of the increased cluster size and a strain caused by the limited size of the fullerene cage. The short distance between Nd and nitride ions leads to a very large ligand-field splitting of Nd3+ of 1100-1200 cm−1, while the variation of the NdM2N cluster composition and concomitant internal strain results in the noticeable modulation of the splitting, which could be directly assessed from the well-resolved fine structure in the Nd-based photoluminescence spectra of NdM2N@C80 clusterfullerenes. Photoluminescence measurements also revealed an unprecedentedly strong nephelauxetic effect, pointing to a high degree of covalency. The latter appears detrimental to the magnetic axiality despite the strong ligand field. As a result, the ground magnetic state has considerable transversal components of the pseudospin g-tensor, and the slow magnetic relaxation of NdSc2N@C80 could be observed by AC magnetometry only in the presence of a magnetic field. A combination of the well-resolved magneto-optical states and slow relaxation of magnetization suggests that Nd clusterfullerenes can be useful building blocks for magneto-photonic quantum technologies.
Paravelia BREDDIN 1898
Creators: name: Heiss, Ernst
name: Eckelt, Andreas
name: Lederwasch, Manfred
name: Unterasinger, Romed
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Veliidae
Paravelia

description: Gattung Paravelia BREDDIN, 1898 exld
Paravelia recens (DRAKE & HARRIS, 1935) *
description: Published as part of Heiss, Ernst, Eckelt, Andreas, Lederwasch, Manfred & Unterasinger, Romed, 2022, Die Heteropterensammlung Ernst Heiss im Tiroler Landesmuseum Ferdinandeum. Teil IX: Gerromorpha II: Familien Mesoveliidae, Hebridae, Hydrometridae, Hermatobatidae, Veliidae, pp. 149-173 in Linzer biologische Beiträge 54 (1) on page 168, DOI: 10.5281/zenodo.7507258
Additional file 1: Table S1. of MicroRNAs differentially expressed in Behรงet disease are involved in interleukin-6 production
Creators: name: Min-Yeong Woo
name: Yun, Su
name: Okki Cho
name: Kyongmin Kim
name: Eun-So Lee
name: Park, Sun
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: Pharmacology
subject: Biotechnology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Differentially expressed microRNAs between BD responders and nonresponders to colchicine treatment. (DOCX 11ย�kb)
Phase equilibrium diagram of Y-Cu-Sb system at 870 K
Creators: name: Romaka, L.
name: Stadnyk, Yu.
name: Romaka, V.V.
name: Zelinskiy, A.
name: Klyzub, P.
name: Horyn, A.
Publisher: name: Ivano-Frankivsʹk : Fizyko-chimičnyj instytut DVNZ "Prykarpatsʹkyj nacionalʹnyj universytet imeni Vasylja Stefanyka"
Year: 2023
Subjects: subject: crystal structure
subject: intermetallics
subject: phase equilibria
subject: ternary system
subject: 530
subject: 540

description: The interaction of the components in the Y-Cu-Sb ternary system was investigated using the methods of X-ray phase analysis, microstructure, and energy-dispersive X-ray spectroscopy in the whole concentration range at 870 K. At the temperature of investigation Y-Cu-Sb system is characterized by the formation of three ternary compounds: Y3Cu22Sb9 (Dy3Cu20+xSb11-x structure type, space group F-43m, a=1.6614(3) nm), Y3Cu3Sb4 (Y3Au3Sb4 structure type, space group I-43d, а = 0.95357(5) nm), YCuSb2 (HfCuSi2 structure type, space group P4/nmm, a = 0.42580(1), c = 0.98932(3) nm). The solubility of copper in the binary compound YSb (NaCl structure type) extends up to 8 at. %.
Floating Zone Growth of Pure and Pb-Doped Bi-2201 Crystals
Creators: name: Roslova, Maria
name: Büchner, Bernd
name: Maljuk, Andrey
Publisher: name: Basel : MDPI
Year: 2024
Subjects: subject: Bi-2201
subject: crystal structure
subject: cuprates
subject: floating zone crystal growth
subject: superconductivity
subject: 540

description: In this review, we summarize recent progress in crystal growth and understanding of the influence of crystal structure on superconductivity in pure and Pb-doped Bi2Sr2CuOy (Bi-2201) materials belonging to the overdoped region of high-temperature cuprate superconductors. The crystal growth of Bi-2201 superconductors faces challenges due to intricate materials chemistry and the lack of knowledge of corresponding phase diagrams. Historically, a crucible-free floating zone method emerged as the most promising growth approach for these materials, resulting in high-quality single crystals. This review outlines the described methods in the literature and the authors’ synthesis endeavors encompassing Pb-doped Bi-2201 crystals, provides a detailed structural characterization of as-grown and post-growth annealed samples, and highlights optimal growth conditions that yield large-size, single-phase, and compositionally homogeneous Bi-2201 single crystals.
Nd─Nd Bond in Ih and D5h Cage Isomers of Nd2@C80 Stabilized by Electrophilic CF3 Addition
Creators: name: Yang, Wei
name: Velkos, Georgios
name: Rosenkranz, Marco
name: Schiemenz, Sandra
name: Liu, Fupin
name: Popov, Alexey A.
Publisher: name: Weinheim : Wiley-VCH
Year: 2023
Subjects: subject: electrophilic trifluoromethylation
subject: lanthanide–lanthanide bond
subject: magnetic properties
subject: metallofullerene
subject: single-crystal X-ray diffraction
subject: 500
subject: 600
subject: 624

description: Synthesis of molecular compounds with metal–metal bonds between 4f elements is recognized as one of the fascinating milestones in lanthanide metallochemistry. The main focus of such studies is on heavy lanthanides due to the interest in their magnetism, while bonding between light lanthanides remains unexplored. In this work, the Nd─Nd bonding in Nd-dimetallofullerenes as a case study of metal–metal bonding between early lanthanides is demonstrated. Combined experimental and computational study proves that pristine Nd2@C80 has an open shell structure with a single electron occupying the Nd─Nd bonding orbital. Nd2@C80 is stabilized by a one-electron reduction and further by the electrophilic CF3 addition to [Nd2@C80]−. Single-crystal X-ray diffraction reveals the formation of two Nd2@C80(CF3) isomers with D5h-C80 and Ih-C80 carbon cages, both featuring a single-electron Nd─Nd bond with the length of 3.78–3.79 Å. The mutual influence of the exohedral CF3 group and endohedral metal dimer in determining the molecular structure of the adducts is analyzed. Unlike Tb or Dy analogs, which are strong single-molecule magnets with high blocking temperature of magnetization, the slow relaxation of magnetization in Nd2@Ih-C80(CF3) is detectable via out-of-phase magnetic susceptibility only below 3 K and in the presence of magnetic field.
MOESM1 of A formalin-inactivated immunogen against viral encephalopathy and retinopathy (VER) disease in European sea bass (Dicentrarchus labrax): immunological and protection effects
Creators: name: NuĂąez-Ortiz, Noelia
name: Pascoli, Francesco
name: Picchietti, Simona
name: Buonocore, Francesco
name: Bernini, Chiara
name: Toson, Marica
name: Scapigliati, Giuseppe
name: Toffan, Anna
Publisher: name: Figshare
Year: 2016
Subjects: subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1. Summary of main characteristics and results obtained with experimental vaccines against VER. The table describes the published works on attempts to produce a vaccine against VER, and corresponding references.
Veloidea GOULD 1934
Creators: name: Heiss, Ernst
name: Eckelt, Andreas
name: Lederwasch, Manfred
name: Unterasinger, Romed
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Veliidae
Veloidea

description: Gattung Veloidea GOULD, 1934 exld
Veloidea gigantea GOULD, 1928 *
description: Published as part of Heiss, Ernst, Eckelt, Andreas, Lederwasch, Manfred & Unterasinger, Romed, 2022, Die Heteropterensammlung Ernst Heiss im Tiroler Landesmuseum Ferdinandeum. Teil IX: Gerromorpha II: Familien Mesoveliidae, Hebridae, Hydrometridae, Hermatobatidae, Veliidae, pp. 149-173 in Linzer biologische Beiträge 54 (1) on page 168, DOI: 10.5281/zenodo.7507258
Tenuipalpus carlosflechtmanni Feres & Hernandes, n. sp.
Creators: name: Feres, Reinaldo J. F.
name: Hernandes, Fábio A.
Publisher: name: Zenodo
Year: 2006
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Prostigmata
Tenuipalpidae
Tenuipalpus
Tenuipalpus carlosflechtmanni

description: Tenuipalpus carlosflechtmanni Feres & Hernandes n. sp. (Figs. 1–8)
Diagnosis: This species is placed in the caudatus group, annonae subgroup (Baker & Tuttle 1987; Meyer 1993); it is similar to T. oliveirai Flechtmann (1994), but differs from the latter mainly by the chaetotaxy of tarsi I–IV: 8(1)­8(1)­5­ 5 in T. carlosflechtmanni sp. n. and 7(1)­6(1)­3­ 3 in T. oliveirai.
Female: (6 individuals)—Body length 286 (275–291); width 176 (165–176). Reddish colour when alive.
Dorsum (Fig.1): prodorsal ve 4 (3–4) and sci 3 (3–4) setae reduced, sce setae 30 (27–30) developed, slightly curved and serrate; hysterosomal setae similar to ve and sci, except h2 whiplike; c1 4 (3–6), c3 9 (8–9), d1 4 (4–6), d3 5 (4–6), e1 6 (4–6), e3 11 (10–15), f1 13 (12–15), f2 14 (13–17), h1 13 (12–14), h2 128 (122–136).
Ven te r (Figs.2–3): IC3 setae relatively short and IC4 elongate; pre­genital setae reaching the bases of genital setae; in one specimen an extra IC4 seta was observed (Fig.3); with 2 pairs of genital setae longer than anal setae.
Gnathosoma (Fig.4): Palpus 3­segmented, 2nd segment elongate with a long hairy seta dorso­distally; 3rd segment short (3) with a terminal prominent rod­like solenidion (9 m), 3 times as long as the segment.
Legs (Figs.5–8): chaetotaxy (from coxa to tarsus): I 3 (including 1a)­1­4­3­5­8(1), II 2­1 ­4­3­5­8(1), III 1­2 ­2­1­3­5, IV 1­1 ­1­0­3­5. Femur I with 2 serrate dorso­lateral setae and two pubescent ventral setae; femur II with 3 serrate dorso­lateral setae and 1 pubescent ventral seta.
Male: Unknown.
Relation to host: inhabits the upper surface of leaves, mainly along the midrib.
Type material: Holotype female, ex. Qualea grandiflora Mart. (Vochysiaceae), September 17, 1987, “Sítio” Santo Antônio (20º44’S; 49º21’W), São José do Rio Preto, São Paulo, Brazil (DZSJRP n.6282). Paratypes: 5 females, same data as holotype (DZSJRP n. 6282–6284).
Etymology: carlosflechtmanni, in homage to Dr. Carlos Holger Wenzel Flechtmann, eminent acarologist of the Escola Superior de Agricultura “Luiz de Queiroz” (ESALQ), Universidade de São Paulo (USP), Piracicaba, SP, Brazil.
description: Published as part of Feres, Reinaldo J. F. & Hernandes, Fábio A., 2006, Three new species of Tenuipalpus Donnadieu (Acari, Tenuipalpidae) from the State of São Paulo, Brazil, pp. 57-68 in Zootaxa 1125 on pages 58-60, DOI: 10.5281/zenodo.171805
Plakortis angulospiculatus Carter 1882
Creators: name: Rützler, Klaus
name: Piantoni, Carla
name: Van, Rob W. M.
name: Díaz, Cristina
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Porifera
Homoscleromorpha
Homosclerophorida
Plakinidae
Plakortis
Plakortis angulospiculatus

description: Plakortis angulospiculatus (Carter, 1882)
Synonymy and references. Plakortis angulospiculatus (Carter, 1879): Zea (1987): 222, fig. 81, pl. 13: 6, 7.
Material. USNM 1228898, Carrie Bow Cay, back reef near reef crest, underside of Acropora palmata coral rubble, 0.3 m; K. Ruetzler col. 23 Apr 1974. USNM 1228899, 1228900 Curlew Bank, forereef cave, 20 m; C. Piantoni col. 28 Jun 2007. USNM 1228901, Carrie Bow Cay forereef cave, 26 m; M. C. Diaz col. 8 Sep 2009.
External morphology. Crustose to cushion-shaped (1–12 mm thick), covering up to 120 cm 2 substratum; with a few small (2 mm), elevated oscula. Surface rough, may be completely covered by another sponge; consistency firm but brittle. Color pale orange to grayish brown and medium-dark brown.
Skeleton structure. Reticulate spicule tracts in the ectosome, densely packed spicules without orientation in the choanosome.
Spicules. Straight, bent, and flexuous diods: 38–300 x 1–10 (165 x 6) Μm; triods generally common, many deformed, with one ray smaller than the others or in odd angles (such as Y-shaped): 53–130 (84) Μm.
Ecology. Under coral plates in the back reef and inside forereef caves, 0.3– 26 m. Tends to be overgrown by other sponges, for instance, Xestospongia deweerdtae (see the description there).
Distribution. Gulf of Mexico and throughout the Caribbean.
Comments. The spicule size range in our specimens is larger than that reported by Zea (1987), close to that given by this author for Plakortis halichondroides (Wilson), but the latter species is black in color and without triactines. However, recent molecular analyses (cox 1, 100% similarity) suggest that these two morphotypes of Plakortis are conspecific (Ereskovsky et al., 2013). P. zygompha (described below) can be distinguished in the field by greenish-brown color and it has considerably smaller spicules. Three new species of Plakortis recently described from cave habitats in Jamaica (Ereskovsky et al., 2013; Table 2) differ clearly in color and spicule characteristics and dimensions; none of them occurred in our samples.
description: Published as part of Rützler, Klaus, Piantoni, Carla, Van, Rob W. M. & Díaz, Cristina, 2014, Diversity of sponges (Porifera) from cryptic habitats on the Belize barrier reef near Carrie Bow Cay, pp. 1-129 in Zootaxa 3805 (1) on page 16, DOI: 10.11646/zootaxa.3805.1.1, http://zenodo.org/record/249983
Dataset on permeability of wings from owls and non-silently flying birds
Creators: name: Geyer, Thomas F.
name: Windisch, Thomas
name: Fritzsche, Christoph
name: Sarradj, Ennes
Publisher: name: Amsterdam [u.a.] : Elsevier
Year: 2024
Subjects: subject: Acoustics
subject: Airflow resistivity
subject: Owl wing
subject: Permeability
subject: Silent flight
subject: 570

description: The very soft and flow-permeable plumage is among the special adaptations of the owl that the silent flight is attributed to. Using a specially designed apparatus that provides a low-speed volume flow of air through a small sample of porous material, measurements of the air flow permeability were performed in accordance to ISO 9053 on a total of 39 prepared wing specimen from six different bird species, including three species of silently flying owls and three non-silently flying bird species. The resulting data set described in the present paper contains the static airflow resistance measured at different positions on the wing.
Anharmonic strong-coupling effects at the origin of the charge density wave in CsV3Sb5
Creators: name: He, Ge
name: Peis, Leander
name: Cuddy, Emma Frances
name: Zhao, Zhen
name: Li, Dong
name: Zhang, Yuhang
name: Stumberger, Romona
name: Moritz, Brian
name: Yang, Haitao
name: Gao, Hongjun
name: Devereaux, Thomas Peter
name: Hackl, Rudi
Publisher: name: [London] : Nature Publishing Group UK
Year: 2024
Subjects: subject: metal
subject: unclassified drug
subject: vanadium antimony
subject: vanadium
subject: electron microscopy
subject: light scattering
subject: probability density function
subject: anisotropy
subject: Article
subject: calculation
subject: charge density
subject: chemical reaction
subject: crystal structure
subject: density functional theory
subject: hysteresis
subject: low temperature
subject: phonon
subject: polarization
subject: Raman spectrometry
subject: strong electron phonon coupling
subject: temperature dependence
subject: adult
subject: article
subject: controlled study
subject: electron
subject: prediction
subject: 500

description: The formation of charge density waves is a long-standing open problem, particularly in dimensions higher than one. Various observations in the vanadium antimonides discovered recently further underpin this notion. Here, we study the Kagome metal CsV3Sb5 using polarized inelastic light scattering and density functional theory calculations. We observe a significant gap anisotropy with 2Δmax/kBTCDW≈20, far beyond the prediction of mean-field theory. The analysis of the A1g and E2g phonons, including those emerging below TCDW, indicates strong phonon-phonon coupling, presumably mediated by a strong electron-phonon interaction. Similarly, the asymmetric Fano-type lineshape of the A1g amplitude mode suggests strong electron-phonon coupling below TCDW. The large electronic gap, the enhanced anharmonic phonon-phonon coupling, and the Fano shape of the amplitude mode combined are more supportive of a strong-coupling phonon-driven charge density wave transition than of a Fermi surface instability or an exotic mechanism in CsV3Sb5.
Corticium quadripartitum Topsent 1923
Creators: name: Rützler, Klaus
name: Piantoni, Carla
name: Van, Rob W. M.
name: Díaz, Cristina
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Porifera
Homoscleromorpha
Homosclerophorida
Plakinidae
Corticium
Corticium quadripartitum

description: Corticium quadripartitum Topsent, 1923
(Figure 5)
Synonymy and references. Corticium quadripartitum Topsent, 1923: 14, fig. 3B.
Material. USNM 1228889, Carrie Bow Cay back reef near reef crest, underside of Acropora palmata coral rubble, 0.3 m; K. Ruetzler col. 23 Apr 1974.
External morphology. A thin cushion covering about 16 cm 2, 3– 5 mm thick. Surface rough, cork-like to the touch, bumpy, with small (1 mm) oscula slightly elevated, pores in small depressed areas in between. Greenisholive color in life, darker brownish on the oscular bumps.
Skeleton structure. Spicules are condensed in a cortex at the surface and along the canals where they contain a large percentage of candelabras. Throughout the interior of the sponge, spicules are distributed in less dense fashion and are dominated by calthrops, mainly lophocalthrops.
Spicules. Basic calthrops (equiangular tetraxons with equal rays): 50–70 (57) Μm; lophocalthrops (one or more of the rays branch into two, three, or four spines, the latter of which led to the species‘ name): 21–60 (44) Μm; candelabras (lophocalthrops with branching, microspined rays): 26–33 (30) Μm; spheres, rare: 4–6 (5, n=5).
Ecology. Only one specimen found under coral rock in a high-energy habitat behind the reef crest, 0.3 m.
Distribution. Previously known only from St. Vincent, in the Grenadine (Windward) Islands; now presumed to be Caribbean-wide.
Comments. The siliceous spheres seen in our SEM micrographs were not part of the original species description but they are easily overlooked by light microscopy.
description: Published as part of Rützler, Klaus, Piantoni, Carla, Van, Rob W. M. & Díaz, Cristina, 2014, Diversity of sponges (Porifera) from cryptic habitats on the Belize barrier reef near Carrie Bow Cay, pp. 1-129 in Zootaxa 3805 (1) on page 13, DOI: 10.11646/zootaxa.3805.1.1, http://zenodo.org/record/249983
Designing Gallium-Containing Hydroxyapatite Coatings on Low Modulus Beta Ti-45Nb Alloy
Creators: name: Vishnu, Jithin
name: Voss, Andrea
name: Hoffmann, Volker
name: Alberta, Ludovico Andrea
name: Akman, Adnan
name: Shankar, Balakrishnan
name: Gebert, Annett
name: Calin, Mariana
Publisher: name: Basel : MDPI
Year: 2023
Subjects: subject: antibacterial gallium
subject: coating
subject: electrodeposition
subject: hydroxyapatite
subject: low modulus beta titanium
subject: 660

description: Low-modulus β-type Ti-45Nb alloy is a promising implant material due to its good mechanical biocompatibility, non-toxicity, and outstanding corrosion resistance. Its excellent chemical stability brings new challenges to chemical surface modification treatments, which are indispensable for both osteogenesis and antibacterial performance. Coatings containing metal ions as anti-microbial agents can be an effective way to reduce implant-associated infections caused by bacterial biofilm. Gallium ion (Ga3+) has the potential to reduce bacterial viability and biofilm formation on implant surfaces. In this study, a novel two-step process has been proposed for Ga3+ incorporation in hydroxyapatite (HAP) to develop bioactive and antibacterial surfaces on Ti-45Nb alloy. For the generation of bioactive surface states, HAP electrodeposition was conducted, followed by wet chemical immersion treatments in gallium nitrate (1 mM). Different buffers such as phosphate, sodium bicarbonate, ammonium acetate, and citrate were added to the solution to maintain a pH value in the range of 6.5–6.9. Coating morphology and HAP phases were retained after treatment with gallium nitrate, and Ga3+ ion presence on the surface up to 1 wt.% was confirmed. Combining Ga and HAP shows great promise to enable the local delivery of Ga3+ ions and consequent antibacterial protection during bone regeneration, without using growth factors or antibiotics.
Plakinastrella onkodes Uliczka 1929
Creators: name: Rützler, Klaus
name: Piantoni, Carla
name: Van, Rob W. M.
name: Díaz, Cristina
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Porifera
Homoscleromorpha
Homosclerophorida
Plakinidae
Plakinastrella
Plakinastrella onkodes

description: Plakinastrella onkodes Uliczka, 1929
(Figure 6)
Synonymy and references. Plakinastrella onkodes Uliczka, 1929: Zea (1987): 227, fig. 83, pl. 13: 9.
Material. USNM 1228890, Carrie Bow Cay, back reef near reef crest, underside of Acropora palmata coral rubble, 0.3 m; K. Ruetzler col. 23 Apr 1974. USNM 1228891, Carrie Bow Cay reef flat, under Porites porites and Acropora cervicornis coral rubble, 0.5 m; K. Ruetzler col. 29 Jan 1986. USNM 1228892, 1228893 Curlew Bank, forereef cave, 20 m; C. Piantoni col. 29 Jun 2007. USNM 1228894 Curlew Bank, forereef cave, 20 m; C. Piantoni col. 2 Jul 2007. USNM 1228895, Carrie Bow Cay South, back reef, lower surface of rock slab, 1 m; K. Ruetzler col. 13 Mar 0 9. USNM 1228896 Curlew Bank, forereef slope framework cave, 20 m; C. Piantoni & M. Parrish, col. 22 Aug 2012. USNM 1228897 Curlew Bank, forereef slope framework cave, 18 m; C. Piantoni & M. Parrish, col. 23 Aug 2012.
External morphology. Encrusting, 4–20 mm thick, with a few oscula (up to 2 mm diameter) irregularly dispersed, some elevated on cone-shaped lobes. Horizontal spread to about 30 cm 2; parts of the body may be covered by crustose coralline algae. Surface slightly rough to the touch, consistency tough elastic. Color cream, orange, bluish or blackish brown; no dark exudates upon preservation.
Skeleton structure. The ectosome shows a dense reticulation of small diactines (diods), some protruding brush-like from the surface. The choanosome is also very dense with spicules, some in mesh-like formation, many without specific orientation.
Spicules. Diods occur in a great size range, most with the characteristic (for the group) kinks or swellings at or near the center: 20–175 x <1–8 (92 x5) Μm. They are accompanied by delicate triods and more robust calthrops; triods: 35–75 (57) Μm; calthrops: 35–75 (51) Μm. Despite similar overall size and lengths of rays, the bases of rays average 4.8 Μm in triods, 6.2 Μm in calthrops.
Ecology. On the lower surfaces of back-reef coral plates and rubble and inside forereef caves, 0.3– 20 m.
Distribution. Common throughout the Caribbean region.
description: Published as part of Rützler, Klaus, Piantoni, Carla, Van, Rob W. M. & Díaz, Cristina, 2014, Diversity of sponges (Porifera) from cryptic habitats on the Belize barrier reef near Carrie Bow Cay, pp. 1-129 in Zootaxa 3805 (1) on pages 13-15, DOI: 10.11646/zootaxa.3805.1.1, http://zenodo.org/record/249983
Additional file 1: of Restriction site free cloning (RSFC) plasmid family for seamless, sequence independent cloning in Pichia pastoris
Creators: name: Vogl, Thomas
name: Mudassar Ahmad
name: Krainer, Florian
name: Schwab, Helmut
name: Glieder, Anton
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Figure S1. Vector maps of the S. pombe vectors used in this study
Tetralophophora Rützler, Piantoni, Van & Díaz, 2014, new genus
Creators: name: Rützler, Klaus
name: Piantoni, Carla
name: Van, Rob W. M.
name: Díaz, Cristina
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Porifera
Homoscleromorpha
Homosclerophorida
Plakinidae
Tetralophophora

description: Genus Tetralophophora new genus
Diagnosis. Plakinidae (Muricy and Díaz, 2002) with leuconoid aquiferous system, diplodal choanocyte chambers, and one size class of calthrops dispersed evenly throughout ectosome and choanosome. The genus name reflects the characterizing type of spicule, tetralophose calthrops.
Type species: Tetralophophora mesoamericana new species.
description: Published as part of Rützler, Klaus, Piantoni, Carla, Van, Rob W. M. & Díaz, Cristina, 2014, Diversity of sponges (Porifera) from cryptic habitats on the Belize barrier reef near Carrie Bow Cay, pp. 1-129 in Zootaxa 3805 (1) on page 16, DOI: 10.11646/zootaxa.3805.1.1, http://zenodo.org/record/249983
Parmaturus Garman 1906
Creators: name: Ebert, David A.
Publisher: name: Zenodo
Year: 2018
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Chondrichthyes
Carcharhiniformes
Scyliorhinidae
Parmaturus

description: Parmaturus Garman, 1906
Type Species: Parmaturus pilosus Garman, 1906, by subsequent designation of Jordan, 1920: 518.
description: Published as part of Ebert, David A., 2018, Parmaturus nigripalatum n. sp., a new species of deep-sea catshark (Chondrichthyes: Carcharhiniformes: Scyliorhinidae) from Indonesia, pp. 531-540 in Zootaxa 4413 (3) on page 532, DOI: 10.11646/zootaxa.4413.3.7, http://zenodo.org/record/1227963
Plakortis zyggompha
Creators: name: Rützler, Klaus
name: Piantoni, Carla
name: Van, Rob W. M.
name: Díaz, Cristina
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Porifera
Homoscleromorpha
Homosclerophorida
Plakinidae
Plakortis
Plakortis zyggompha

description: Plakortis zyggompha (de Laubenfels, 1934)
Synonymy and references. Plakortis zyggompha (de Laubenfels, 1934): Diaz & van Soest (1994): 104.
Material. USNM 1228902, 1228903, 1228904, Carrie Bow Cay, back reef near reef crest, underside of Acropora palmata coral rubble, 0.3 m; K. Ruetzler col. 23 Apr 1974. USNM 1228905, Carrie Bow Cay south back reef, lower surface of coral rock, 1m; K. Ruetzler col. 13 Mar 0 9.
External morphology. Small crusts or cushions (to 5 mm thick), covering up to 5 cm 2. Small (1 mm) oscula, located on the thicker lobes. Smooth surface, firm-elastic consistency. Color cream to olive, brown, and blackish brown.
Skeleton structure. Spicules densely packed throughout.
Spicules. Diods, small but of considerable size range: 18–138 x 3–8 (85 x 5) Μm; triods, common: 38–110 (55) Μm.
Ecology. Under platy coral rubble in the back reef, 0.3–1 m, reported from below 100 m.
Distribution. Gulf of Mexico and Caribbean.
description: Published as part of Rützler, Klaus, Piantoni, Carla, Van, Rob W. M. & Díaz, Cristina, 2014, Diversity of sponges (Porifera) from cryptic habitats on the Belize barrier reef near Carrie Bow Cay, pp. 1-129 in Zootaxa 3805 (1) on page 16, DOI: 10.11646/zootaxa.3805.1.1, http://zenodo.org/record/249983
Additional file 1: Table S2. of Promoter hypermethylation of SHOX2 and SEPT9 is a potential biomarker for minimally invasive diagnosis in adenocarcinomas of the biliary tract
Creators: name: V. Branchi
name: P. Schaefer
name: A. Semaan
name: A. Kania
name: P. Lingohr
name: J. Kalff
name: N. SchĂ¤Fer
name: G. Kristiansen
name: D. Dietrich
name: H. Matthaei
Publisher: name: Figshare
Year: 2016
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Primers locations and sequences. (DOCX 181 kb)
Additional file 1: Figure S1. of Low-power photodynamic therapy induces survival signaling in perihilar cholangiocarcinoma cells
Creators: name: Weijer, Ruud
name: Broekgaarden, Mans
name: Golen, Rowan Van
name: Bulle, Esther
name: Nieuwenhuis, Esther
name: Jongejan, Aldo
name: Moerland, Perry
name: Kampen, Antoine Van
name: Gulik, Thomas Van
name: Heger, Michal
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Pharmacology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer

description: In vivo toxicity evaluation of ZnPC-ITLs. (A) Chicken embryos were intravenously injected on embryonic development day 12 with different concentrations of ZnPC-ITLs (n = 7 per group). The concentrations indicate the final lipid concentration in blood. Control embryos were intravenously injected with an equal volume of 0.75 % NaCl. (B) C57BL/6 mice were intravenously injected with ZnPC-ITLs (2.5 mM, final lipid concentration in blood, red line) or physiological buffer (black line). Mice were weighed every four days until day 28 post-injection. Data is presented as mean ± SD with n = 8 per group. (C) Biochemical and hematological parameters assessed in C57BL/6 mice 28 days after systemic administration of ZnPC-ITLs. Data is presented as mean ± SD with n = 8 per group. Statistical analysis was performed as described in section "Statistical analysis". Abbreviations: ALT, alanine transaminase; AST, aspartate transaminase; CK-MB, creatine kinase M and B; CPK, creatine phosphokinase; LDH, lactate dehydrogenase. (D) Histology of liver, spleen, and lung of C57BL/6 mice 28 days after systemic administration of ZnPC-ITLs or physiological buffer (control). Hematoxylin and eosin staining, magnification 20 × . (DOC 5788 kb)
MOESM2 of Transfusion of platelets, but not of red blood cells, is independently associated with nosocomial infections in the critically ill
Creators: name: Engele, Leo
name: Straat, Marleen
name: Rooijen, Ingeborg
name: Vooght, Karen
name: Cremer, Olaf
name: Schultz, Marcus
name: Bos, Lieuwe
name: Juffermans, Nicole
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Additional file 2. Supplemental statistical methods. Table S1.1 Comparison of the combination of blood transfusion products in all transfused patients. Table S1.2 2 Comparison of the combination of blood transfusion products in transfused patients with an infection. Table S1.3 Patient characteristics according to transfusion product. Tables S2. Models for RBC transfusion. Tables S3. Models of FFP transfusion. Table S4. Models for PLT transfusion. Table S5. Logistic and cox regression model for each type of transfusion separately. Table S6 Analysis of independent transfusion risk factors for nosocomial infection. Table S7. Analysis of independent transfusion risk factors for nosocomial Infection with SOFA score on day 3.
Tetralophophora mesoamericana Rützler, Piantoni, Van & Díaz, 2014, new species
Creators: name: Rützler, Klaus
name: Piantoni, Carla
name: Van, Rob W. M.
name: Díaz, Cristina
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Porifera
Homoscleromorpha
Homosclerophorida
Plakinidae
Tetralophophora
Tetralophophora mesoamericana

description: Tetralophophora mesoamericana new species
(Figures 3 a, 7, 8)
Material. Holotype: USNM 1228906, Curlew Bank forereef cave, 18 m; C. Piantoni and M. Parrish, col. 25 Aug 2012.
Diagnosis. Encrusting to cushion-shaped, yellow-ochre plakinid with small but numerous aquiferous openings evenly distributed over the surface, and with tetralophose calthrops (51 µm mean diameter) scattered across the ectosome and choanosome.
External morphology. The holotype is encrusting another sponge (Agelas schmidti), 1–6 mm thick, and covering about 15 cm 2 of surface area. The surface is smooth but sprinkled by circular oscular and ostial openings, 0.2–0.5 µm in diameter. Consistency is firm but compressible, color yellowish ochre.
Skeleton structure and histology. Spicules are densely and about evenly distributed throughout the ectosome and choanosome. Embryos are common and in various stages of development, averaging 250 µm in diameter. Diplodal choanocyte chambers are abundant and measure 25–38 µm in cross sections.
Spicules. All are tetralophose calthrops with diameters of 33–61 (51) µm. Typical rays (including distal spines) measure 18– 33 x 4–8 (28 x 6) µm. Most rays have 2–5 apical spines, which may have points adorned by two or three spines, some have one or two spines halfway along their length, a few are furcated half way, then ending in spined points.
Ecology. Discovered in a forereef cave in 18 m; overgrowing coral rock and a specimen of another sponge, Agelas schmidti.
Distribution. Belize.
Etymology. Named for the location of its discovery, the Mesoamerican Barrier Reef.
Comments. We introduce a new genus with hesitation but the latest review of the family (Muricy and Díaz, 2002) does not provide for a suitable allocation among established taxa. According to this review, the genus Placinolopha Topsent is closely related to our Tetralophophora by sharing the tetralophose calthrops, but it also includes diactinolophose and triactinolophose and, in some species, non-lophose spicules. Presence of diplodal choanocyte chambers and absence of candelabras make it impossible to include our species in the current definitions of Plakina or Corticium.
description: Published as part of Rützler, Klaus, Piantoni, Carla, Van, Rob W. M. & Díaz, Cristina, 2014, Diversity of sponges (Porifera) from cryptic habitats on the Belize barrier reef near Carrie Bow Cay, pp. 1-129 in Zootaxa 3805 (1) on page 17, DOI: 10.11646/zootaxa.3805.1.1, http://zenodo.org/record/249983
Additional file 2: Figure S2. of Low-power photodynamic therapy induces survival signaling in perihilar cholangiocarcinoma cells
Creators: name: Weijer, Ruud
name: Broekgaarden, Mans
name: Golen, Rowan Van
name: Bulle, Esther
name: Nieuwenhuis, Esther
name: Jongejan, Aldo
name: Moerland, Perry
name: Kampen, Antoine Van
name: Gulik, Thomas Van
name: Heger, Michal
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology

description: Validation of absolute log2 fold-changes as obtained by microarray with qRT-PCR. Microarray-derived transcript levels of a panel of genes are depicted for the ITL 50 and ITL 500 group in white and green, respectively. The corresponding qRT-PCR levels of these genes are depicted for the ITL 50 group in grey and the ITL 500 group in red. Gene expression is depicted as the log2 fold-change between treated and untreated cells. The microarray and qRT-PCR data were normalized to the expression level of the reference gene RPS18. (DOC 247Â kb)
Additional file 4: Figure S3. of Low-power photodynamic therapy induces survival signaling in perihilar cholangiocarcinoma cells
Creators: name: Weijer, Ruud
name: Broekgaarden, Mans
name: Golen, Rowan Van
name: Bulle, Esther
name: Nieuwenhuis, Esther
name: Jongejan, Aldo
name: Moerland, Perry
name: Kampen, Antoine Van
name: Gulik, Thomas Van
name: Heger, Michal
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Analysis of qRT-PCR products by gel electrophoresis. (A) Lane 1 contains a ladder and lanes 2 â   8 show the specific qRT-PCR products of the genes that are listed on top of each lane. (B) Lane 1 contains a ladder and lane 2 shows the reference gene RPS18. The amplicon size of a specific gene product is noted in parentheses below each gene name. (DOC 1796Â kb)
Additional file 1: of Safe prescribing training provision for junior doctors: is this optimal?
Creators: name: Kennedy, Maria
name: Malik, Muzaffar
name: Inam Haq
name: Williams, Sian
name: Okorie, Michael
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences

description: Trainee questionnaire. (DOCX 309Â kb)
Stochastic field dynamics in models of spontaneous unitarity violation
Creators: name: Mertens, Lotte
name: Wesseling, Matthijs
name: Van Wezel, Jasper
Publisher: name: Amsterdam : SciPost Foundation
Year: 2024
Subjects: subject: Gravity role
subject: wave-packet
subject: quantum
subject: 530

description: Objective collapse theories propose a solution to the quantum measurement problem by predicting deviations from Schrödinger's equation that can be tested experimentally. A class of objective theories based on spontaneous unitarity violation was recently introduced, in which the stochastic field required for obtaining Born's rule does not depend on the state of the system being measured. Here, we classify possible models for the stochastic field dynamics in theories of spontaneous unitarity violation. We show that for correlated stochastic dynamics, the field must be defined on a closed manifold. In two or more dimensions, it is then always possible to find stochastic dynamics yielding Born's rule, independent of the state being measured or the correlation time of the stochastic field. We show that the models defined this way are all isomorphic to the definition on a two-sphere, which we propose to be a minimal physical model for the stochastic field in models of spontaneous unitarity violation.
Cinachyrella kuekenthali Uliczka 1929
Creators: name: Rützler, Klaus
name: Piantoni, Carla
name: Van, Rob W. M.
name: Díaz, Cristina
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Porifera
Demospongiae
Spirophorida
Tetillidae
Cinachyrella
Cinachyrella kuekenthali

description: Cinachyrella kuekenthali (Uliczka, 1929)
Synonymy and references. Cinachyrella kuekenthali (Uliczka, 1929): Rützler & Smith (1992): 154, figs. 4, 5.
Material. USNM 1228907, Curlew Bank forereef cave, 20 m; C. Piantoni col. 29 Jun 2007. USNM 1228908, Curlew Bank forereef cave, 20 m; C. Piantoni col. 2 Jul 2007. USNM 1228909, Curlew Bank, forereef slope (wall), 50-150 cm inside framework cave, ceiling, 20 m; C. Piantoni and M. Parrish, col. 22 Aug 2012.
External morphology. Bright yellow balls, 24–26 mm in diameter, almost entirely encrusted by thin, leaf-like layers of bright red crustose coralline algae. A few irregularly dispersed porocalices are on top of the specimens, 1.5–3 mm in diameter.
Skeleton structure. Spicules are arranged radially; there is no cortex.
Spicules. There are oxeas in three size classes, averaging 3,200 x 35 Μm, 2200 x 8 Μm, and 160 x 3 Μm, the smallest one finely spinose; protriaenes and -diaenes in one size class (3800 x11 Μm rhabds, 50 Μm clads), less common anatriaenes (3,700 x 6 Μm rhabds, 39 Μm clads), and relatively (to other species in the genus) large, microspined sigmaspires (17 Μm). Because most spicules are broken on the slide, measurements (except for the small, microspined oxeas and the sigmaspires) are estimates from fragments; they are however within the ranges given in Rützler & Smith (1992).
Ecology. Typically an open, shallow-reef species, less common in caves, 20 m; also dredged from 100 m.
Distribution. From North Carolina to Florida, the Bahamas, Gulf of Mexico, Caribbean, and Northeastern Brazil.
Comments. This is a rare record of the species from a semi-dark cave, where it was attached to the ceiling.
description: Published as part of Rützler, Klaus, Piantoni, Carla, Van, Rob W. M. & Díaz, Cristina, 2014, Diversity of sponges (Porifera) from cryptic habitats on the Belize barrier reef near Carrie Bow Cay, pp. 1-129 in Zootaxa 3805 (1) on pages 18-19, DOI: 10.11646/zootaxa.3805.1.1, http://zenodo.org/record/249983
Steering of Vortices by Magnetic Field Tilting in Open Superconductor Nanotubes
Creators: name: Bogush, Igor
name: Fomin, Vladimir M.
name: Dobrovolskiy, Oleksandr V.
Publisher: name: Basel : MDPI
Year: 2024
Subjects: subject: 3D nanostructures
subject: microwave frequencies
subject: superconductivity
subject: vortex dynamics
subject: 570
subject: 540

description: In planar superconductor thin films, the places of nucleation and arrangements of moving vortices are determined by structural defects. However, various applications of superconductors require reconfigurable steering of fluxons, which is hard to realize with geometrically predefined vortex pinning landscapes. Here, on the basis of the time-dependent Ginzburg–Landau equation, we present an approach for the steering of vortex chains and vortex jets in superconductor nanotubes containing a slit. The idea is based on the tilting of the magnetic field (Formula presented.) at an angle (Formula presented.) in the plane perpendicular to the axis of a nanotube carrying an azimuthal transport current. Namely, while at (Formula presented.), vortices move paraxially in opposite directions within each half-tube; an increase in (Formula presented.) displaces the areas with the close-to-maximum normal component (Formula presented.) to the close(opposite)-to-slit regions, giving rise to descending (ascending) branches in the induced-voltage frequency spectrum (Formula presented.). At lower B values, upon reaching the critical angle (Formula presented.), the close-to-slit vortex chains disappear, yielding (Formula presented.) of the (Formula presented.) type ((Formula presented.) : an integer; (Formula presented.) : the vortex nucleation frequency). At higher B values, (Formula presented.) is largely blurry because of multifurcations of vortex trajectories, leading to the coexistence of a vortex jet with two vortex chains at (Formula presented.). In addition to prospects for the tuning of GHz-frequency spectra and the steering of vortices as information bits, our findings lay the foundation for on-demand tuning of vortex arrangements in 3D superconductor membranes in tilted magnetic fields.
Additional file 2: of Safe prescribing training provision for junior doctors: is this optimal?
Creators: name: Kennedy, Maria
name: Malik, Muzaffar
name: Inam Haq
name: Williams, Sian
name: Okorie, Michael
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences

description: Trainer questionnaire. (DOCX 307Â kb)
Additional file 3: of Effective strategies to reduce commercial tobacco use in Indigenous communities globally: A systematic review
Creators: name: Minichiello, Alexa
name: Lefkowitz, Ayla
name: Firestone, Michelle
name: Smylie, Janet
name: Schwartz, Robert
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: Quality Assessment Tool. (PDF 71 kb)