cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
A Microlensing Accretion Disk Size Measurement in the Lensed Quasar WFI 2026-4536
Creators: name: Cornachione, Matthew A.
name: Morgan, Christopher W.
name: Millon, Martin
name: Bentz, Misty C.
name: Courbin, Frederic
name: Bonvin, Vivien
name: Falco, Emilio E.
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We use thirteen seasons of R-band photometry from the 1.2m Leonard Euler Swiss Telescope at La Silla to examine microlensing variability in the quadruply-imaged lensed quasar WFI 2026-4536. The lightcurves exhibit ${\sim}\,0.2\,\text{mag}$ of uncorrelated variability across all epochs and a prominent single feature of ${\sim}\,0.1\,\text{mag}$ within a single season. We analyze this variability to constrain the size of the quasar's accretion disk. Adopting a nominal inclination of 60$^\text{o}$, we find an accretion disk scale radius of $\log(r_s/\text{cm}) = 15.74^{+0.34}_{-0.29}$ at a rest-frame wavelength of $2043\,\unicode{xC5}$, and we estimate a black hole mass of $\log(M_{\text{BH}}/M_{\odot}) = 9.18^{+0.39}_{-0.34}$, based on the CIV line in VLT spectra. This size measurement is fully consistent with the Quasar Accretion Disk Size - Black Hole Mass relation, providing another system in which the accretion disk is larger than predicted by thin disk theory.
description: 26 pages, 8 figures, Appendix with data table, pg 12-25
Climate-Adapted Soil Cultivation as an Aspect for Sustainable Farming –
Creators: name: Guenther-Lübbers, Welf
name: Arens, Ludwig
name: Theuvsen, Ludwig
name: Guenther-Lübbers, Welf
name: Arens, Ludwig
name: Theuvsen, Ludwig
Publisher: name: Unknown
Year: 2013
Subjects: subject: Agribusiness
subject: Farm Management
subject: Production Economics
subject: Research Methods/ Statistical Methods
subject: Decision support systems
subject: task-technology fit
subject: climate change
subject: arable farming

description: Due to global climate change and its impact on local weather conditions, decision support systems are becoming more important in agriculture. Such systems allow farmers to adapt more effectively to the complex changes affecting their farms. Marginal production sites must apply new tillage strategies adapted to new climatic conditions. Information about proper strategy adjustments is often disseminated through agricultural extension services and journals. A new internet information platform, KlimaBob, which focuses on climate-flexible tillage, was established under the auspices of the Innovation Network of Climate Change Adaptation Brandenburg Berlin. Successful and permanent introduction of such a system requires analysis and verification of its acceptance among individual farmers. This study addresses this need by applying the established task-technology fit approach. A survey was conducted among farmers in the Brandenburg region. The resulting data provided the basis for a structural equation model that explains and evaluates the task-technology fit of the KlimaBob platform. The results indicate that the performance spectrum of the system exerts a strong influence on the task-technology fit when assessed by both the name characteristics of KlimaBob and the individual characteristics of users (for example, time management, technology affinity and risk attitude).
Domestic freezer storage: a solution for preserving stool microbiota integrity for at-home collection
Creators: name: Momo Cabrera, Paula
name: Bokulich, Nicholas
name: Zimmermann, Petra
Publisher: name: ETH Zurich
Year: 2024
Subjects: Stool microbiome
Early life
Storage
Domestic freezer
Shotgun metagenomic sequencing

description: The gut microbiome is crucial for host health. Early childhood is a critical period for the development of a healthy gut microbiome, but it is particularly sensitive to external influences. Recent research has focused on using advanced techniques like shotgun metagenome sequencing to identify key microbial signatures and disruptions linked to disease. For accurate microbiome analysis, samples need to be collected and stored under specific conditions to preserve microbial integrity and composition, with -80°C storage considered the gold standard for stabilization.

This study investigates the effect of domestic freezer storage on the microbial composition of stool samples from 20 children under 4 years with the use of shotgun metagenomic sequencing. Fresh stool samples were aliquoted into sterile tubes, with one aliquot stored at 4°C and analyzed within 24 hours, while others were frozen in domestic freezers (below -18°C) and analyzed after 1 week, 2 months, and 6 months. Assessments of contig assembly quality, microbial diversity, and antimicrobial resistance genes revealed no significant degradation or variation in microbial composition.

Importance Most previous studies on sample storage have used amplicon sequencing, which limits relevance to metagenome sequencing, in which contig quality and functional gene detection are additional concerns. Moreover, the effects of domestic freezer storage for at-home stool collection on microbiome profiles, contig quality, and antimicrobial resistance gene profiles have not been tested previously.

Our findings suggest that stool samples stored in domestic freezers for up to six months maintain the integrity of metagenomic data. These findings indicate that domestic freezer storage does not compromise the integrity or reproducibility of metagenomic data, offering a reliable and accessible alternative for temporary sample storage. This approach enhances the feasibility of large-scale at-home stool collection and citizen science projects, even those focused on the more easily perturbed early life microbiome. This advancement enables more inclusive research into the gut microbiome, enhancing our understanding of its role in human health.
description: bioRxiv
Demianski-Newman solution revisited
Creators: name: Aguilar-Sanchez, J. A.
name: Garcia, A. A.
name: Manko, V. S.
Publisher: name: arXiv
Year: 2001
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: The derivation of the Demianski-Newman solution within the framework of the Ernst complex formalism is considered. We show that this solution naturally arises as a two-soliton specialization of the axisymmetric multi-soliton electrovacuum metric, and we work out the full set of the corresponding metrical fields and electromagnetic potentials. Some limits and physical properties of the DN space-time are briefly discussed.
description: 9 pages, no figures. Accepted for publication in Gravitation and Cosmology
Review of annealing effects and superconductivity in Fe$_{1+y}$Te$_{1-x}$Se$_x$ superconductors
Creators: name: Sun, Yue
name: Shi, Zhixiang
name: Tamegai, Tsuyoshi
Publisher: name: arXiv
Year: 2019
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: Fe$_{1+y}$Te$_{1-x}$Se$_x$ is unique in their structural simplicity, consisting of only FeTe/Se layers, which is favorable for probing the mechanism of superconductivity. Recently, a topological surface superconductivity as well as the Majorana Fermions has been observed, which makes Fe$_{1+y}$Te$_{1-x}$Se$_x$ the first high temperature topological superconductor. Since large size single crystal of Fe$_{1+y}$Te$_{1-x}$Se$_x$ can be easily grown, many researches have been performed. However, a large part of the reported results are under controversy, including the resistivity, susceptibility, Hall effect, gap structure, phase diagram, etc. These controversies are believed to come from the sample-dependent Fe nonstoichiometries, which originate from the partial occupation of the second Fe site (excess Fe) in the Te/Se layer. The excess Fe with valence near Fe$^+$ will provide electron doping into the system. Meanwhile, the excess Fe is also strongly magnetic, which will act as a paring breaker and also localize the charge carriers. Removing the excess Fe is essential to probe the intrinsic properties and mechanism of superconductivity of Fe$_{1+y}$Te$_{1-x}$Se$_x$ compounds. In this topical review, we propose the effective approaches to remove excess Fe in Fe$_{1+y}$Te$_{1-x}$Se$_x$. Furthermore, we discuss the mechanism of annealing based on the evolutions of structure, composition, and morphology with annealing. Moreover, we also review the annealing effects on the normal state and superconducting properties, including the magnetism, transport properties, band structure, $T_{\rm{c}}$, phase diagram, upper critical field, anisotropy, critical current density, gap structure, and superconducting pairing. This review presents not only the optimal way to prepare crystals without excess Fe, but also the intrinsic properties of Fe$_{1+y}$Te$_{1-x}$Se$_x$ without the influence of excess Fe.
description: review paper; 38 pages, 33 figures
Building responsible intelligent creative kids (B.R.I.C.K.): a case study of a teacher-initiated public school reform model in Newark, New Jersey.
Creators: name: Knauer, Dorothy
Publisher: name: No Publisher Supplied
Year: 2020

description: It is a complex task to educate children and appropriately measure achievement even under ideal circumstances. However, attempts to do so in desperately poor urban environments must consider the many variables that impact learning if we are to help children succeed. Even where there is strong will to make things better, there also may be an urgency to produce immediate results that makes assessment of the big picture or broad effects difficult. This case study follows the first four years of a school turnaround model in Newark, NJ. The study goes beyond student test scores to observe and document efforts to change the school environment, impact teacher/staff/parent attitudes and skills, and assess the reform effort in the words of those who participated. A teacher–led group promised to turn around one of the state’s lowest performing and most impoverished schools. The founders, all teachers and former Teach For America alumni, created an organization based on best practices and dedicated to the success of neighborhood children. They named their educational non–profit B.R.I.C.K.—Building Responsible Intelligent Creative Kids—which is both its name and its mission. Mixed methods of data collection included the analysis 200 parent surveys, 40 teacher surveys, 40 interviews with teachers, staff and parents; archives and documents; and field observations. Results suggest that when sustained focus on early literacy instruction and achievement is accomplished, more students learn to read at a higher level of competency in spite of extreme factors working against their success (e.g., poverty, transiency, chronic absenteeism, special needs). That said, administrators should be wary of over–interpreting single year test scores after implementing major reform, because complex factors can influence a school in a single academic year. Norm–referenced and criterion–referenced student achievement data, lessons learned by administrators, teachers, and staff, challenges, implications for best practices and resulting recommendations are presented. In an era of loss of local control of education and increased emphasis on accountability, the present study of a neighborhood–based, teacher–led school “turnaround” model provides potential guidance and inspiration to practitioners, policy makers, parents, and local citizens.
Innovative Solutions of the Future Internet: Needs of the Food Chain Users
Creators: name: Viola, Katalin
name: Gábor, István
name: Sebők, András
name: Viola, Katalin
name: Gábor, István
name: Sebők, András
Publisher: name: Unknown
Year: 2013
Subjects: subject: Agribusiness
subject: Food Consumption/Nutrition/Food Safety
subject: Research and Development/Tech Change/Emerging Technologies
subject: Research Methods/ Statistical Methods
subject: Resource /Energy Economics and Policy
subject: Future Internet
subject: innovative applications
subject: agri-food sector
subject: needs of users

description: Within the SmartAgriFood project 135 in depth interviews in 6 countries, and 8 focus group discussions in 5 countries were carried out for identification and evaluation of the potential applications of the Future Internet (FI) in the agri-food area. Several innovative ideas were described by the participants and there were also some demands, expectations and limitations which were universally mentioned by them. One of the main expectations is that FI should be accessible for anybody, anywhere and anytime. In addition the followings should be ensured: higher privacy; compatibility; integration of systems; longer range in communication; lower implementation costs; and user-friendly interfaces. The most important prerequisite is making aware and training of the users, as most of them do not have appropriate experience about using the Internet. For enhancing the application of the ICT solutions in the agri-food sector the above mentioned needs of the users should be considered and met by the ICT community.
Cannabis Use, Screen Time, and Internalizing Symptoms among Canadian Youth: Testing Mediation Pathways
Creators: name: Doggett, Amanda
name: Gohari, Mahmood R.
name: Godin, Katelyn M.
name: Ferro, Mark A.
name: Patte, Karen A.
name: Leatherdale, Scott T.
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Background: Existing research suggests positive correlations between screen time sedentary behaviors (STSB) and substance use, including cannabis use, among youth. However, little research has examined what factors mediate these relationships. Methods: This study examined mediating pathways among STSB, internalizing symptoms (IS), and cannabis use in a linked longitudinal sample of 28 269 Canadian youth who participated in the COMPASS study over a two-year period (2017/18 to 2018/19). Structural equation modeling examined two main hypotheses cross-sectionally and over time: 1) if IS mediated associations between STSB and cannabis use frequency, and 2) if STSB mediated associations between IS and cannabis use frequency. Results: Results demonstrated significant partial mediation effects for both hypotheses. For example, indirect effects indicated that IS mediated the association between STSB and cannabis use both cross sectionally (95% CI: 0.021, 0.029) and longitudinally (95% CI: 0.006, 0.010). STSB also mediated associations between IS and cannabis use cross sectionally (95% CI: 0.015, 0.023) and longitudinally (95% CI: 0.010, 0.014). This study demonstrated that the associations between STSB, internalizing symptoms and cannabis use are complex, involving mediation in both directions. Discussion: These findings can be used to inform public health initiatives that aim to take a comprehensive approach to addressing negative health behaviors and outcomes, as it is clear that the multi-directional relationships between STSB and mental health may in-turn impact other health behaviors. Future research should continue to examine mediating factors between STSB and substance use among youth, including exploration of associations with other substances. Supplemental data for this article is available online at https://doi.org/10.1080/10826084.2021.1922455 .
Ronzotherium Aymard 1854
Creators: name: Antoine, Pierre-Olivier
name: Sen, Sevket
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Perissodactyla
Rhinocerotidae
Ronzotherium

description: Genus Ronzotherium Aymard, 1854
 TYPE SPECIES. — Ronzotherium velaunum by original designation (Aymard 1854).
description: Published as part of Antoine, Pierre-Olivier & Sen, Sevket, 2016, Rhinocerotidae and Chalicotheriidae (Perissodactyla, Tapiromorpha), pp. 245-259 in Geodiversitas 38 (2) on page 247, DOI: 10.5252/g2016n2a6, http://zenodo.org/record/5207918
Where do quasar hosts lie with respect to the size-mass relation of galaxies?
Creators: name: Silverman, John D.
name: Treu, Tommaso
name: Ding, Xuheng
name: Jahnke, Knud
name: Bennert, Vardha N.
name: Birrer, Simon
name: Schramm, Malte
name: Schulze, Andreas
name: Kartaltepe, Jeyhan S.
name: Sanders, David B.
name: Cen, Renyue
Publisher: name: arXiv
Year: 2019
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: The evolution of the galaxy size - stellar mass (Mstellar) relation has been a puzzle for over a decade. High redshift galaxies are significantly more compact than galaxies observed today, at an equivalent mass, but how much of this apparent growth is driven by progenitor bias, minor mergers, secular processes, or feedback from AGN is unclear. To help disentangle the physical mechanisms at work by addressing the latter, we study the galaxy size - Mstellar relation of 32 carefully-selected broad-line AGN hosts at 1.2 < z < 1.7 (7.5 < log M_BH < 8.5; L_bol/L_Edd > 0.1). Using HST with multi-band photometry and state-of-the-art modeling techniques, we measure half-light radii while accounting for uncertainties from subtracting bright central point sources. We find AGN hosts to have sizes ranging from 1 to 6 kpc at Mstellar ~ 0.3 - 1 x 10^11 Msun. Thus, many hosts have intermediate sizes as compared to equal-mass star-forming and quiescent galaxies. While inconsistent with the idea that AGN feedback may induce an increase in galaxy sizes, this finding is consistent with hypotheses in which AGNs preferentially occur in systems with prior concentrated gas reservoirs, or are involved in secular compaction processes perhaps responsible for simultaneously building bulges and shutting down star formation. If driven by minor mergers, which do not grow central black holes as fast as they do bulge-like stellar structures, such a process would explain both the galaxy size - mass relation observed here and the evolution in the black hole, bulge mass relation described in a companion paper.
description: 4 pages; 1 figure; To be resubmitted to ApJ Letters imminently; minor corrections based on comments from the referee have been included; Further comments are welcome
Additional file 2 of Knowledge of iatrogenic premature ovarian insufficiency among Chinese obstetricians and gynaecologists: a national questionnaire survey
Creators: name: Wang, Yanfang
name: Zou, Ying
name: Wang, Wei
name: Zheng, Qingmei
name: Feng, Ying
name: Dong, Han
name: Tan, Zhangyun
name: Zeng, Xiaoqin
name: Zhao, Yinqing
name: Peng, Danhong
name: Yang, Xiaomin
name: Sun, Aijun
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: Mental Health

description: Additional file 2 : Supplementary Table 1. Comparison of views on iatrogenic condition(s) to induce POI among respondents with different length of service (years).
Decoherence of a singlet-triplet superposition state under dipolar interactions of an uncorrelated environment
Creators: name: Vorndamme, P.
name: Schnack, J.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Recently it was shown that by means of an STM it is experimentally possible to stimulate clock transitions between the singlet and the non-magnetic triplet state of a Heisenberg-coupled spin dimer (Bae et al., Science Advances 4, eaau4159). This leads to more strongly protected clock transitions while ordinary ones only provide first-order protection against magnetic noise. However, large decoherence times of clock like states normally refer to ensembles of spins which do not dephase. In the cited experiment only one single dimer is manipulated and not an ensemble. For this reason we simulate how a single dimer behaves in an environment of other spins which couple to the dimer via dipolar interactions. We perform unitary time evolutions in the complete Hilbert space including dimer and a reasonably large environment. We will see that for a weak environment this approach confirms long decoherence times for the clock like state, but with stronger couplings this statement does not hold. As a reference we compare the behavior of the dimer with other, non-clock like, superposition states. Furthermore, we show that the internal dynamics of the bath plays an important role for the decoherence time of the system. In a regime where the system is weakly coupled to the bath, stronger interactions among environmental spins worsen the decoherence time up to a certain degree, while if system and bath are strongly coupled, stronger interactions in the environment improve decoherence times.
description: 7 pages, 13 figures, PRB accepted
Market trends and consumer demand for fresh berries
Creators: name: Sobekova, Kristina
name: Thomsen, Michael R.
name: Ahrendsen, Bruce L.
name: Sobekova, Kristina
name: Thomsen, Michael R.
name: Ahrendsen, Bruce L.
Publisher: name: Unknown
Year: 2013
Subjects: subject: Agribusiness
subject: Agricultural and Food Policy
subject: Food Consumption/Nutrition/Food Safety
subject: berry crops
subject: demand analysis
subject: retail food markets

description: We present an analysis of markets for fresh strawberries, blueberries, blackberries and raspberries in the United States during 2008–2011. We use weekly panel data covering supermarket purchases in 52 cities. The primary goal is to estimate demand elasticities for fresh berries and thereby provide a better understanding of consumer behaviour in response to price changes and the nature of competition among these crops. We estimate fixed and random effects models for double log demand equations and a complete demand system, the Almost Ideal Demand System. The latter specification can be used to estimate demand relationships that conform to utility maximising behaviour. The elasticity estimates are very robust across the different specifications and estimation methods. This increases confidence in our findings and provides some assurance that choice of functional form or estimation method is not driving our results. We find that retail demands for all berry crops are in the elastic range and that the different berries are substitutes for one another. The demand for strawberries was the least elastic with an own price elasticity of –1.26 and blackberries were the most elastic with a demand elasticity of –1.88. Blackberry demand was also the most responsive to the prices of competing berry crops. The study provides clearer insight into markets for berries in the United States. In addition, it fills a gap in the present lack of up-to-date consumer demand elasticities for these crops and will be useful for growers, decision makers and consumers.
An ALMA Study of the FU-Ori Type Object V900 Mon: Implications for the Progenitor
Creators: name: Takami, Michihiro
name: Chen, Tsu-Sheng
name: Liu, Hauyu Baobab
name: Hirano, Naomi
name: Kospal, Agnes
name: Abraham, Peter
name: Vorobyov, Eduard I.
name: de Miera, Fernando Cruz-Saenz
name: Csengeri, Timea
name: Green, Joel
name: Hogerheijde, Michiel
name: Hsieh, Tien-Hao
name: Karr, Jennifer L.
name: Dong, Ruobing
name: Trejo, Alfonso
name: Chen, Lei
Publisher: name: arXiv
Year: 2019
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We present ALMA observations of 12CO, 13CO, and C18O J=2--1 lines and the 230 GHz continuum for the FU Ori-type object (FUor) V900 Mon (d~1.5 kpc), for which the accretion burst was triggered between 1953 and 2009. We identified CO emission associated with a molecular bipolar outflow extending up to a ~10^4 au scale and a rotating molecular envelope extending over >10^4 au. The interaction with the hot energetic FUor wind, which was observed using optical spectroscopy, appears limited to a region within ~400 au of the star. The envelope mass and the collimation of the extended CO outflow suggest that the progenitor of this FUor is a low-mass Class I young stellar object (YSO). These parameters for V900 Mon, another FUor, and a few FUor-like stars are consistent with the idea that FUor outbursts are associated with normal YSOs. The continuum emission is marginally resolved in our observations with a 0."2x0."15 (~300x225 au) beam, and a Gaussian model provides a deconvolved FWHM of ~90 au. The emission is presumably associated with a dusty circumstellar disk, plus a possible contribution from a wind or a wind cavity close to the star. The warm compact nature of the disk continuum emission could be explained with viscous heating of the disk, while gravitational fragmentation in the outer disk and/or a combination of grain growth and their inward drift may also contribute to its compact nature.
description: 21 pages, 11 figures, accepted by ApJ
Numerical Relativity: Status and Prospects
Creators: name: Lehner, Luis
Publisher: name: arXiv
Year: 2002
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We are entering an era where the numerical construction of generic spacetimes is becoming a reality. The use of computer simulations, in principle, allows us to solve Einstein equations in their full generality and unravel important messages so far hidden in the theory. Despite the problems still found in present applications, significant progress is being achieved in a number of areas where simulations are on the verge of providing useful physical information. This article reviews recent progress made in the field, paying particular attention to black hole spacetimes and discuss open problems and prospects for the future.
description: 18 pages, 6 figures, report of the plenary talk at the 16th International Conference on General Relativity and Gravitation, held at Durban, S. Africa in July 2001 Corrected 1 figure from previous version
Temperature Monitoring for Quality Prediction and Inventory Control in Cold Chain: a Case of 18℃ Ready-to-eat Food in Taiwan
Creators: name: Iao, L.C.
name: Hsiao, H.I.
name: Yang, M.F.
name: Iao, L.C.
name: Hsiao, H.I.
name: Yang, M.F.
Publisher: name: Unknown
Year: 2013
Subjects: subject: Agribusiness
subject: Food Consumption/Nutrition/Food Safety
subject: Food Security and Poverty
subject: Industrial Organization
subject: food
subject: quality
subject: temperature
subject: cold chain
subject: incoming
subject: inventory
subject: logistics

description: The aim of the study was the development of a quality prediction model combined with the incoming analysis for temperature control in 18 degree ready-to-eat food during logistics flows. And analyzed how temperature monitoring improves inventory decision. Base on the growth of Pseudomonas sp., the model was developed by mathematical model with Gompertz model. The model predicts for quality as well as shelf life in the monitoring temperature is about 19.5 h. On the other hand, the incoming analysis shows that the inventory quantities at 7 ℃ and 18 ℃ is more than at 25 ℃. The model can be considered to be an effective tool (in combination with temperature monitoring) for improvement of quality management with the incoming consideration. Moreover, our results suggest that temperature-controlled food companies could share temperature information with its chain partners which emphases a food quality and logistics cost balance in supply chain.
Chilotherium Ringstrom 1924
Creators: name: Antoine, Pierre-Olivier
name: Sen, Sevket
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Perissodactyla
Rhinocerotidae
Chilotherium

description: Genus Chilotherium Ringström, 1924
 TYPE SPECIES. — Chilotherium anderssoni Ringström, 1924, by original designation.
description: Published as part of Antoine, Pierre-Olivier & Sen, Sevket, 2016, Rhinocerotidae and Chalicotheriidae (Perissodactyla, Tapiromorpha), pp. 245-259 in Geodiversitas 38 (2) on page 250, DOI: 10.5252/g2016n2a6, http://zenodo.org/record/5207918
Figure S1 from Behavioural analysis of single-cell aneural ciliate, Stentor roeseli, using machine learning approaches
Creators: name: Trinh, Mi Kieu
name: Wayland, Matthew T.
name: Sudhakaran Prabakaran
Publisher: name: The Royal Society
Year: 2019
Subjects: subject: 60114 Systems Biology
subject: FOS: Biological sciences
subject: 60199 Biochemistry and Cell Biology not elsewhere classified
subject: 69999 Biological Sciences not elsewhere classified
subject: Computational Biology

description: A. Micro-stimulation apparatus and set-up. Picture of the whole apparatus set up B. Glass needle set-up. Picture of the zoomed in section where showing the glass needle.
NanoTag - an IgG-free method for mapping DNA-protein interactions
Creators: name: Dimitriu, Maria A.
name: Arzate-Mejía, Rodrigo G.
name: Steg, Leonard C.
name: Germain, Pierre-Luc
name: Mansuy, Isabelle
Publisher: name: ETH Zurich
Year: 2024
Subjects: Chromatin
DNA-protein interactions
Nanobody
CUT&Tag
Epigenomics
Tn5 tagmentation
Chromatin profiling

description: Genome-wide profiling of DNA-protein interactions in cells can provide important information 20 about mechanisms of gene regulation. Most current methods for genome-wide profiling of 21 DNA-bound proteins, such as ChIP-seq and CUT&Tag, use conventional IgG antibodies to 22 bind target protein(s), which limits their applicability to targets for which high affinity and high 23 specificity antibodies are available. Here we describe NanoTag, a novel method derived from 24 CUT&Tag that is IgG-free and uses a nanobody to profile DNA-protein interactions. NanoTag 25 is based on an anti-GFP nanobody-Tn5 transposase fusion that allows mapping GFP-tagged 26 proteins associated with chromatin in a fast and cost-effective manner. We demonstrate the 27 utility of NanoTag by profiling the histone mark H3K4me3 via its binding partner TATA box 28 binding protein-associated factor 3 (TAF3) and the transcription factors Nanog and CTCF in 29 mouse embryonic stem cells expressing GFP-tagged targets. For the targets examined, 30 NanoTag data shows high correlation to CUT&Tag data and displays a similarly high signal 31 to-noise ratio. Overall, NanoTag provides a flexible, IgG-free and cost-effective method to 32 generate high resolution DNA-binding profiles in cells or tissues.
description: bioRxiv
Supplementary Material for "On the reproducibility of miRNA-Seq differential expression analyses in neuropsychiatric diseases"
Creators: name: Pérez-Rodríguez, Daniel
name: López-Fernández, Hugo
name: Agís-Balboa, Roberto C.
Publisher: name: Zenodo
Year: 2021
Subjects: miRNA-Seq
reproducibility
neuropsychiatry

description: Supplementary Material for "On the reproducibility of miRNA-Seq differential expression analyses in neuropsychiatric diseases". This file includes all the configurations used for the analysis, as well as the original results, miARma-Seq results and the comparison results. A more detailed description can be found in the README file.
Swot analysis and identification of the needs, potential and development strategies of the fruit and vegetable sector in Montenegro
Creators: name: Jovović, Radislav
name: Janković, Dragoljub
name: Jovović, Radislav
name: Janković, Dragoljub
Publisher: name: Unknown
Year: 2013
Subjects: subject: Agribusiness
subject: Agricultural and Food Policy
subject: SWOT analysis
subject: fruit and vegetable sector
subject: market trends
subject: improvement
subject: strategies

description: Fruit and vegetable production in Montenegro benefits from naturally favourable conditions in terms of climate, soil and water resources. Such conditions enable high quality fruit, vegetables and vines to be grown, and fruit and vegetable production and viticulture have a long tradition as well as the cultivation of a wide assortment of produce. A significant number of Montenegrin households therefore deal with horticultural and wine production, although on a small-scale. Along with the global market trends, the level of domestic consumption, the expected evolution of the distribution system in Montenegro and the planned dynamic developments in the tourist sector, these natural conditions contribute to creating basic conditions for the development of the considered sector. Market opportunities are favourable and represent an additional contributing factor towards its development. In spite of the favourable climate for production in this sector and the supportive market opportunities, the real value of Montenegrin products at sector level is quite low. We conduct a SWOT analysis of the sector aimed to find out its potential as well as the needs of the sector. Our starting hypothesis is that the potential of this sector in Montenegro is greater than current activity/production, and that suitable strategies can provide higher results in this sector. The main outcome of this paper will be our suggestions for improvement within the sector. The SWOT analysis will be completed according to the PESTEL categorisation, after which Opportunities and Threats will be grouped into three major strategic categories: “New market trends”, “Sector financing” and “Structure and functioning of the value chain”. The SWOT analysis outcomes, when regarded alongside a review of global market trends and domestic production potential, lead to strategies for the improvement of the sector. Key
Athlete-monitoring to assess performance, biomarker responses, and training load in female collegiate athletes
Creators: name: Bozzini, Brittany
Publisher: name: No Publisher Supplied
Year: 2020

description: National Collegiate Athletic Association (NCAA) sports face unique challenges to success. Unlike their professional counterparts, collegiate athletes experience the stress of the sport coupled with academic demands, frequent travel, and other additional stressors that coaches and training staff must account for when assessing the training and recovery needs of their athletes. Therefore, athlete-monitoring methods that can be used to evaluate an athlete’s capabilities and limitations, determine adaptations to a training program, and assess fatigue status become crucial in order to optimize performance and decrease injury risk, especially in the collegiate setting. In addition female athletes are at an increased-risk for certain hormonal-related issues due to their sex that may have long-term impacts on performance and overall health. Therefore, the purpose of this dissertation is to provide insight into the use of athlete-monitoring methods for the female athlete in order to optimize performance and health. In addition, this dissertation seeks to evaluate and characterize training loads, performance, and biomarkers throughout the competitive season in NCAA women’s soccer and beach volleyball teams.
Strong-weak coupling self-duality in the two-dimensional quantum phase transition of $p+ip$ superconducting arrays
Creators: name: Xu, Cenke
name: Moore, Joel E.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: The 2D quantum phase transition that occurs in a square lattice of $p+ip$ superconductors is used to show how four-body interactions in $d=2$ reproduce nonperturbative effects familiar from the study of two-body interactions in $d=1$. This model can be analyzed using an exact lattice self-duality of the associated 3D classical model; this duality is the 3D generalization of the Kramers-Wannier duality of the 2D Ising model, and there are similar exact dualities for certain many-spin interactions in dimensions $d \geq 3$. We also discuss the excitation spectrum in the ordered and disordered phases, and the relationship between our model and previously studied metallic behavior of boson models with four-boson interactions.
description: 4 pages
Attentive History Selection for Conversational Question Answering
Creators: name: Qu, Chen
name: Yang, Liu
name: Qiu, Minghui
name: Zhang, Yongfeng
name: Chen, Cen
name: Croft, W. Bruce
name: Iyyer, Mohit
Publisher: name: arXiv
Year: 2019
Subjects: subject: Information Retrieval (cs.IR)
subject: FOS: Computer and information sciences

description: Conversational question answering (ConvQA) is a simplified but concrete setting of conversational search. One of its major challenges is to leverage the conversation history to understand and answer the current question. In this work, we propose a novel solution for ConvQA that involves three aspects. First, we propose a positional history answer embedding method to encode conversation history with position information using BERT in a natural way. BERT is a powerful technique for text representation. Second, we design a history attention mechanism (HAM) to conduct a "soft selection" for conversation histories. This method attends to history turns with different weights based on how helpful they are on answering the current question. Third, in addition to handling conversation history, we take advantage of multi-task learning (MTL) to do answer prediction along with another essential conversation task (dialog act prediction) using a uniform model architecture. MTL is able to learn more expressive and generic representations to improve the performance of ConvQA. We demonstrate the effectiveness of our model with extensive experimental evaluations on QuAC, a large-scale ConvQA dataset. We show that position information plays an important role in conversation history modeling. We also visualize the history attention and provide new insights into conversation history understanding.
description: Accepted to CIKM 2019
Persiatherium Pandolfi 2016
Creators: name: Antoine, Pierre-Olivier
name: Sen, Sevket
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Perissodactyla
Rhinocerotidae
Persiatherium

description: Genus Persiatherium Pandolfi, 2016
 TYPE SPECIES. — Persiatherium rodleri Pandolfi, 2016 by original designation (Pandolfi 2016: 2).
description: Published as part of Antoine, Pierre-Olivier & Sen, Sevket, 2016, Rhinocerotidae and Chalicotheriidae (Perissodactyla, Tapiromorpha), pp. 245-259 in Geodiversitas 38 (2) on page 253, DOI: 10.5252/g2016n2a6, http://zenodo.org/record/5207918
Markov-chain approach to a process with long-time memory
Creators: name: Lacorata, Guglielmo
name: Pasmanter, Ruben A.
name: Vulpiani, Angelo
Publisher: name: arXiv
Year: 2001
Subjects: subject: Chaotic Dynamics (nlin.CD)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences

description: We show that long-term memory effects, present in the chaotic dispersion process generated by a meandering jet model, can be nonetheless taken into account by a first order Markov process, provided that the states of the phase space partition, chosen to describe the system, be appropriately defined.
description: submitted to Journal of Physical Oceanography
Kalimantsia Geraads, Spassov & Kovachev 2001
Creators: name: Antoine, Pierre-Olivier
name: Sen, Sevket
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Perissodactyla
Chalicotheriidae
Kalimantsia

description: Genus Kalimantsia Geraads, Spassov & Kovachev, 2001
 TYPE AND ONLY SPECIES. — Kalimantsia bulgarica Geraads, Spassov & Kovachev, 2001 by original designation (Geraads et al. 2001: 596).
description: Published as part of Antoine, Pierre-Olivier & Sen, Sevket, 2016, Rhinocerotidae and Chalicotheriidae (Perissodactyla, Tapiromorpha), pp. 245-259 in Geodiversitas 38 (2) on page 256, DOI: 10.5252/g2016n2a6, http://zenodo.org/record/5207918
Evolution of Young Neutron Star Envelopes
Creators: name: Chang, P.
name: Bildsten, L.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We extend our initial study of diffusive nuclear burning (DNB) for neutron stars (NSs) with Hydrogen atmospheres and an underlying layer of proton capturing nuclei. Our initial study showed that DNB can alter the photospheric abundance of Hydrogen on surprisingly short timescales ($10^{2-4}\yrs$). Significant composition evolution impacts the radiated thermal spectrum from the NS as well as its overall cooling rate. In this paper, we consider the case when the rate limiting step for the H consumption is diffusion to the burning layer, rather than the local nuclear timescale. This is relevant for NSs with surface temperatures in excess of $10^6 {\rm K}$, such as young ($<10^5$ yr) radio pulsars and accreting NSs in quiescence. When downward diffusion is the limiting rate in DNB, the rate of H consumption is suppressed by 1-2 orders of magnitude compared to a DNB estimate that assumes diffusive equilibrium. In order to apply our ongoing study to young neutron stars, we also include the important effects of strong magnetic fields ($B \sim 10^{12} {\rm G}$). In this initial study of magnetic modifications to DNB, we find that the H burning time is lengthened by 2-3 orders of magnitude for a $10^{12} {\rm G}$ field. However, even for NSs with dipole field strengths of $10^{12}$ G, we find that all of the H can be burned before the pulsar reaches an age of $\sim 10^5 \ {\rm yr}$, thus potentially revealing the underlying proton-capturing elements. Finally, we conclude by providing an overview of what can be learned about fallback and pulsar winds from measuring the surface composition of a young NS.
description: 10 pages, 8 figures, to appear in ApJ
Duality and Transport for Supersymmetric Graphene from the Hemisphere Partition Function
Creators: name: Gupta, Rajesh Kumar
name: Herzog, Christopher P.
name: Jeon, Imtak
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We use localization to compute the partition function of a four dimensional, supersymmetric, abelian gauge theory on a hemisphere coupled to charged matter on the boundary. Our theory has eight real supercharges in the bulk of which four are broken by the presence of the boundary. The main result is that the partition function is identical to that of ${\mathcal N}=2$ abelian Chern-Simons theory on a three-sphere coupled to chiral multiplets, but where the quantized Chern-Simons level is replaced by an arbitrary complexified gauge coupling $τ$. The localization reduces the path integral to a single ordinary integral over a real variable. This integral in turn allows us to calculate the scaling dimensions of certain protected operators and two-point functions of abelian symmetry currents at arbitrary values of $τ$. Because the underlying theory has conformal symmetry, the current two-point functions tell us the zero temperature conductivity of the Lorentzian versions of these theories at any value of the coupling. We comment on S-dualities which relate different theories of supersymmetric graphene. We identify a couple of self-dual theories for which the complexified conductivity associated to the U(1) gauge symmetry is $τ/2$.
description: 36 pages, 6 figures; v2 refs added
title: 02_1410
Creators: name: Wesley Baldwin, John
name: Baldwin, John W.
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2018
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: L'ensemble de ces notes ont été crée par John Baldwin lors d'une de ses premières périodes de résidence à Paris. Ces documents comprennent tous les magistri qu’il avait pu rencontrer dans ses sources. Aux XIIème et XIIIème siècles, les universités n'existant pas encore, le titre de magister s'il évoque certainement une compétence n'est pas rattaché de façon systématique au passage par les écoles. De surcroît, les magistris sont le plus souvent désignés par leur seul prénom. La lecture de ces données est donc difficile et suppose un long travail pour tenter d'identifier un individu auquel on pourrait rattacher plusieurs mentions. John Baldwin avait donc renoncé à utiliser ces données pour donner un prolongement à sa magnifique étude sur les gradués d'université et leur emploi par les Capétiens et les Plantagenêts. Néanmoins, il a conservé ces données et elles sont potentiellement très utile dans le cadre de Studium, comme le sont toutes les mentions dans les volumes des Fasti Ecclesiae Gallicanae de chanoines portant ce titre de magister sans autres précisions. L'ampleur des dépouillements rend ces données très utiles et nous devons une grande reconnaissance à John Baldwin pour avoir pris la peine de faire photocopier ses fiches et de nous les avoir transmises amicalement.
Les données ainsi que les images des fiches sont accessibles sur le site Internet à l'adresse suivante : http://studium-baldwin.lamop.fr/.
Les transcriptions des fiches ont été effectuées par des étudiants de Paris 1 Panthéon - Sorbonne mais elles n'ont pas été corrigées par la suite.
description: Relation: https://lamop.hypotheses.org/
Chalicomys Kaup 1832
Creators: name: Sen, Sevket
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Castoridae
Chalicomys

description: Genus Chalicomys Kaup, 1832
 TYPE SPECIES. — Chalicomys jaegeri Kaup, 1832.
description: Published as part of Sen, Sevket, 2016, Rodents, lagomorphs and insectivores, pp. 299-314 in Geodiversitas 38 (2) on page 302, DOI: 10.5252/g2016n2a9, http://zenodo.org/record/5207974
The Einstein-Vlasov sytem/Kinetic theory
Creators: name: Andreasson, Hakan
Publisher: name: arXiv
Year: 2002
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: The main purpose of this article is to guide the reader to theorems on global properties of solutions to the Einstein-Vlasov system. This system couples Einstein's equations to a kinetic matter model. Kinetic theory has been an important field of research during several decades where the main focus has been on nonrelativistic- and special relativistic physics, e.g. to model the dynamics of neutral gases, plasmas and Newtonian self-gravitating systems. In 1990 Rendall and Rein initiated a mathematical study of the Einstein-Vlasov system. Since then many theorems on global properties of solutions to this system have been established. The Vlasov equation describes matter phenomenologically and it should be stressed that most of the theorems presented in this article are not presently known for other such matter models (e.g. fluid models). The first part of this paper gives an introduction to kinetic theory in non-curved spacetimes and then the Einstein-Vlasov system is introduced. We believe that a good understanding of kinetic theory in non-curved spacetimes is fundamental in order to get a good comprehension of kinetic theory in general relativity.
description: 31 pages. This article has been submitted to Living Rev. Relativity (http://www.livingreviews.org)
Data Management Plan Template: Open Science Workflows
Creators: name: Morissette, Erica
name: Harper, Lina
name: Peters, Isabella
name: Tayler, Felicity
name: Haustein, Stefanie
Publisher: name: Zenodo
Year: 2021
Subjects: mixed methods
open science
open scholarship
data sharing

description: This template guides the writing of a research data management plan (DMP) with an open science/open scholarship workflow, which uses mixed social sciences research methods, producing quantitative as well as qualitative datasets. The questions emphasize data sharing and reuse throughout the project, not only at the final stage of publication. This DMP template will be most useful to researchers who are working in a multi-institutional partnership and who have already completed a funding application and an ethics review protocol. The DMP is a living document: don’t forget to revisit your DMP throughout the research project to update or review your responses. Not all of these questions will apply to all research projects. We encourage you to respond to as many as possible but ultimately, you and your team have to decide which questions and answers apply to your workflow.
description: Also available on the Meaningful Data Counts Zenodo community space: https://doi.org/10.5281/zenodo.4092122