cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1 of Shrimp genome sequence contains independent clusters of ancient and current Endogenous Viral Elements (EVE) of the parvovirus IHHNV
Creators: name: Taengchaiyaphum, Suparat
name: Wongkhaluang, Prapatsorn
name: Sittikankaew, Kanchana
name: Karoonuthaisiri, Nitsara
name: Flegel, Timothy W.
name: Sritunyalucksana, Kallaya
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology

description: Additional file 1: Supplementary Figure S1. Alignment of the 561 bp repetitive sequences flanking the non-infectious IHHNV-EVE Cluster 1 located in PC35. The sequences are aligned in the same direction and share 98% identity (547/561 bp with 9/561 nucleotide gaps). Supplementary Figure S2. Alignment of the two 519 bp repetitive sequences flanking IHHNV-EVE Cluster 2 located on PC35. The sequences are aligned in the same direction and share 77% identity (400/519 bp with 66/519 nucleotide gaps). Supplementary Figure S3. Alignment of the direct repetitive sequences flanking the infectious IHHNV-EVE Cluster 3 located on PC7. A total 1758 bp were aligned and share 98% identity (1722/1758 bp with 21/1758 nucleotide gaps). Supplementary Figure S4. Multiple sequence alignment of potential 309 bp targets for the OIE- recommend IHHNV detection method from three repeats in IHHNV-EVE observed in PC7 (R1-R3). The 309F/R primer positions are indicated by red rectangles. The primer sequences and potential amplicon sizes match 100% to those expected for infectious IHHNV. Supplementary Figure S5. Multiple nucleotide sequences alignment of PCR amplicons of R1 fragment in Fig. 4. Both forward and reverse sequence read directions were analyzed and the sequence similarity was 99% identity when aligned to original PC7 sequence portion. The nucleotide portion in rectangular represent anti-sense direction of IHHNV-EVE corresponding to the PC7 sequence assembly.
New measurement of the $E_{\mathrm{c.m.}}=323$ keV resonance in the $^{19}$F$($p,γ$)$^{20}$Ne reaction
Creators: name: Williams, M.
name: Adsley, P.
name: Davids, B.
name: Greife, U.
name: Hutcheon, D.
name: Karpesky, J.
name: Lennarz, A.
name: Lovely, M.
name: Ruiz, C.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Nuclear Experiment (nucl-ex)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: At temperatures below 0.1 GK the $^{19}$F$(p,γ)^{20}$Ne reaction is the only breakout path out of the CNO cycle. Experimental studies of this reaction are challenging from a technical perspective due to copious $γ$-ray background from the far stronger $^{19}$F$(p,α)^{16}$O reaction channel. Here we present the first inverse kinematics study of the $^{19}$F$(p,γ)^{20}$Ne reaction, in which we measure the strength of the 323-keV resonance. We find a strength value of $ωγ= 3.3^{+1.1}_{-0.9}$ meV, which is a factor of two larger than the most recent previous study. The discrepancy is likely the result of a direct to ground state transition which previous studies were not sensitive to. We also observe the transition to the first $2^{-}$ state, which has not been observed for this resonance in previous studies. A new thermonuclear reaction rate is calculated and compared with the literature.
description: arXiv admin note: text overlap with arXiv:1910.01698
Additional file 1 of Willingness of population health survey participants to provide personal health information and biological samples
Creators: name: Jaswal, Harpreet
name: Ialomiteanu, Anca
name: Hamilton, Hayley
name: Rehm, Jürgen
name: Wells, Samantha
name: Shield, Kevin D.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Computational Biology

description: Supplementary Material 1
Anisotropic Dzyaloshinskii-Moriya interaction protected by D2d crystal symmetry in two-dimensional ternary compounds
Creators: name: Ga, Yonglong
name: Cui, Qirui
name: Zhu, Yingmei
name: Yu, Dongxing
name: Wang, Liming
name: Liang, Jinghua
name: Yang, Hongxin
Publisher: name: arXiv
Year: 2022
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences

description: Magnetic skyrmions, topologically protected chiral spin swirling quasiparticles, have attracted great attention in fundamental physics and applications. Recently, the discovery of two-dimensional (2D) van der Waals (vdW) magnets has aroused great interest due to their appealing physical properties. Moreover, both experimental and theoretical works have revealed that isotropic Dzyaloshinskii Moriya interaction (DMI) can be achieved in 2D magnets or ferromagnet-based heterostructures. However, 2D magnets with anisotropic DMI haven't been reported yet. Here, via using first-principles calculations, we unveil that anisotropic DMI protected by D2d crystal symmetry can exist in 2D ternary compounds MCuX2. Interestingly, by using micromagnetic simulations, we demonstrate that ferromagnetic (FM) antiskyrmions, FM bimerons, antiferromagnetic (AFM) antiskyrmions and AFM bimerons can be realized in MCuX2 family. Our discovery opens up an avenue to creating antiskyrmions and bimerons with anisotropic DMI protected by D2d crystal symmetry in 2D magnets.
description: Main text and supplementary materials attached
Additional file 1 of Novel rapid intraoperative qualitative tumor detection by a residual convolutional neural network using label-free stimulated Raman scattering microscopy
Creators: name: Reinecke, David
name: von Spreckelsen, Niklas
name: Mawrin, Christian
name: Ion-Margineanu, Adrian
name: Fürtjes, Gina
name: Jünger, Stephanie T.
name: Khalid, Florian
name: Freudiger, Christian W.
name: Timmer, Marco
name: Ruge, Maximilian I.
name: Goldbrunner, Roland
name: Neuschmelting, Volker
Publisher: name: figshare
Year: 2022
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer

description: Additional file 1. Table S1: Internal consistency analysis and overall agreement of the three residual Convolutional Neural Networks (CNNs). Table S2: Comparison of prediction probabilities of the three residual Convolutional Neural Networks (CNN) of the corresponding random areas of the same tumor samples in mean and standard deviation, and Intraclass correlation coefficient (ICC). Table S3: Subdivision of predictions of neuropathological evaluation (NP), residual convolutional neural network (CNN), and each interrater agreement (CP) based on the different entities.
Additional file 1 of Development and psychometric properties of the maternal ambivalence scale in spanish women
Creators: name: Martín-Sánchez, Magdalena Belén
name: Martínez-Borba, Verónica
name: Catalá, Patricia
name: Osma, Jorge
name: Peñacoba-Puente, Cecilia
name: Suso-Ribera, Carlos
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: Science Policy

description: Additional file 1.
Energy-Efficient Wake-Up Signalling for Machine-Type Devices Based on Traffic-Aware Long-Short Term Memory Prediction
Creators: name: Ruíz-Guirola, David E.
name: Rodríguez-López, Carlos A.
name: Montejo-Sánchez, Samuel
name: Souza, Richard Demo
name: López, Onel L. A.
name: Alves, Hirley
Publisher: name: arXiv
Year: 2022
Subjects: subject: Signal Processing (eess.SP)
subject: Machine Learning (cs.LG)
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: FOS: Computer and information sciences

description: Reducing energy consumption is a pressing issue in low-power machine-type communication (MTC) networks. In this regard, the Wake-up Signal (WuS) technology, which aims to minimize the energy consumed by the radio interface of the machine-type devices (MTDs), stands as a promising solution. However, state-of-the-art WuS mechanisms use static operational parameters, so they cannot efficiently adapt to the system dynamics. To overcome this, we design a simple but efficient neural network to predict MTC traffic patterns and configure WuS accordingly. Our proposed forecasting WuS (FWuS) leverages an accurate long-short term memory (LSTM)- based traffic prediction that allows extending the sleep time of MTDs by avoiding frequent page monitoring occasions in idle state. Simulation results show the effectiveness of our approach. The traffic prediction errors are shown to be below 4%, being false alarm and miss-detection probabilities respectively below 8.8% and 1.3%. In terms of energy consumption reduction, FWuS can outperform the best benchmark mechanism in up to 32%. Finally, we certify the ability of FWuS to dynamically adapt to traffic density changes, promoting low-power MTC scalability
Characterization of chromospheric activity based on Sun-as-a-star spectral and disk-resolved activity indices
Creators: name: Dineva, Ekaterina
name: Pearson, Jeniveve
name: Ilyin, Ilia
name: Verma, Meetu
name: Diercke, Andrea
name: Strassmeier, Klaus G.
name: Denker, Carsten
Publisher: name: arXiv
Year: 2022
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: The strong chromospheric absorption lines Ca H & K are tightly connected to stellar surface magnetic fields. Only for the Sun, spectral activity indices can be related to evolving magnetic features on the solar disk. The Solar Disk-Integrated (SDI) telescope feeds the Potsdam Echelle Polarimetric and Spectroscopic Instrument (PEPSI) of the Large Binocular Telescope (LBT) at Mt. Graham International Observatory (MGIO), Arizona, U.S.A. We present high-resolution, high-fidelity spectra that were recorded on 184 & 82 days in 2018 & 2019 and derive the Ca H & K emission ratio, i.e., the S-index. In addition, we compile excess brightness and area indices based on full-disk Ca K line-core filtergrams of the Chromospheric Telescope (ChroTel) at Observatorio del Teide, Tenerife, Spain and full-disk ultraviolet (UV) 1600~Å images of the Atmospheric Imaging Assembly (AIA) on board the Solar Dynamics Observatory (SDO). Thus, Sun-as-a-star spectral indices are related to their counterparts derived from resolved images of the solar chromosphere. All indices display signatures of rotational modulation, even during the very low magnetic activity in the minimum of Solar Cycle 24. Bringing together different types of activity indices has the potential to join disparate chromospheric datasets, yielding a comprehensive description of chromospheric activity across many solar cycles.
D3.2: Control system specification and algorithms
Creators: name: Halvorsen, Ivar J.
name: Zenith, Federico
Publisher: name: Zenodo
Year: 2018
Subjects: control
prognostics
hierarchy
polarisation
spectroscopy
relay
rejuvenation
humidity

description: This report describes a set of prognostics and health management functions that shall be added to the basic control functions of the Giantleap Fuel Cell system. There is a close interaction of the work packages for diagnostics (WP1), prognostics and remaining useful life prediction (WP2), and integration of the full Fuel Cell System, including the BEG Control system with the basic control and monitoring functions (WP5).
Additional file 1 of Low molecular weight heparin dosing regimens after total joint arthroplasty: a prospective, single-center, randomized, double-blind study
Creators: name: Shang, Jingjing
name: Wang, Liangliang
name: Gong, Jinhong
name: Liu, Xinru
name: Su, Dan
name: Zhou, Xindie
name: Wang, Yuji
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer

description: Supplementary Material 1
Additional file 1 of DeLTa-Seq: direct-lysate targeted RNA-Seq from crude tissue lysate
Creators: name: Kashima, Makoto
name: Kamitani, Mari
name: Nomura, Yasuyuki
name: Mori-Moriyama, Natsumi
name: Betsuyaku, Shigeyuki
name: Hirata, Hiromi
name: Nagano, Atsushi J.
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1: Data 1 Expressions of gene set 1 in EtOH-, jasmonic-acid-, and salicylic-acid-treated A. thaliana seedlings. Magenta lines represent trend curves of each target log2 RPM + 1 with the ambient temperatures.
Dataset: Dependency Networks of Open Source Libraries Available Through CocoaPods, Carthage and Swift PM
Creators: name: Rahkema, Kristiina
name: Pfahl, Dietmar
Publisher: name: arXiv
Year: 2022
Subjects: subject: Software Engineering (cs.SE)
subject: FOS: Computer and information sciences
subject: D.2.6; D.2.7; D.2.10

description: Third party libraries are used to integrate existing solutions for common problems and help speed up development. The use of third party libraries, however, can carry risks, for example through vulnerabilities in these libraries. Studying the dependency networks of package managers lets us better understand and mitigate these risks. So far, the dependency networks of the three most important package managers of the Apple ecosystem, CocoaPods, Carthage and Swift PM, have not been studied. We analysed the dependencies for all publicly available open source libraries up to December 2021 and compiled a dataset containing the dependency networks of all three package managers. The dependency networks can be used to analyse how vulnerabilities are propagated through transitive dependencies. In order to ease the tracing of vulnerable libraries we also queried the NVD database and included publicly reported vulnerabilities for these libraries in the dataset.
description: 5 pages
Halting hyaluronidase activity with hyaluronan-based nanohydrogels: development of versatile injectable formulations
Creators: name: Montanari, E.
name: Zoratto, N.
name: Mosca, L.
name: Cervoni, L.
name: Lallana, E.
name: Angelini, R.
name: Matassa, R.
name: Coviello, T.
name: Di Meo, C.
name: Matricardi, P.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: Hyaluronan (HA) is among the most used biopolymers for viscosupplementation and cosmetic applications. However, the current injectable HA-based formulations present relevant limitations: I) unmodified HA is quickly degraded by endogenous hyaluronidases (HAase), resulting in short lasting properties; II) cross-linked HA, although shows enhanced stability against HAase, often contains toxic chemical cross-linkers. As such, herein, we present biocompatible self-assembled hyaluronan-cholesterol nanohydrogels (HA-CH NHs) able to bind to HAase and inhibit the enzyme activity in vitro, more efficiently than currently marketed HA-based cross-linked formulations (e.g. JonexaTM). HA-CH NHs inhibit HAase through a mixed mechanism, by which NHs bind to HAase with an affinity constant 7-fold higher than that of HA. Similar NHs, based on gellan-cholesterol, evidenced no binding to HAase, neither inhibition of the enzyme activity, suggesting this effect might be due to the specific binding of HA-CH to the active site of the enzyme. Therefore, HA-CH NHs were engineered into injectable hybrid HA mixtures or physical hydrogels, able to halt the enzymatic degradation of HA.
description: 27 pages, 9 figures
Additional file 2 of DeLTa-Seq: direct-lysate targeted RNA-Seq from crude tissue lysate
Creators: name: Kashima, Makoto
name: Kamitani, Mari
name: Nomura, Yasuyuki
name: Mori-Moriyama, Natsumi
name: Betsuyaku, Shigeyuki
name: Hirata, Hiromi
name: Nagano, Atsushi J.
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 2: Data 2 Expressions of gene set 2 in EtOH-, jasmonic-acid-, and salicylic-acid-treated A. thaliana seedlings. Magenta lines represent trend curves of each target log2 RPM + 1 with the ambient temperatures.
Additional file 4 of DeLTa-Seq: direct-lysate targeted RNA-Seq from crude tissue lysate
Creators: name: Kashima, Makoto
name: Kamitani, Mari
name: Nomura, Yasuyuki
name: Mori-Moriyama, Natsumi
name: Betsuyaku, Shigeyuki
name: Hirata, Hiromi
name: Nagano, Atsushi J.
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 4: Fig. S1. Performance of previously reported buffers for mammalian cultured cells in direct-lysate reverse transcription of A. thaliana, O. sativa, and D. rerio. Fig. S2. Comparison of RNA-Seq results of purified RNA and lysate of S. cerevisiae and D. rerio. Fig. S3. UMI conversion efficiencies of 96 technical replicates of non-targeted and targeted RNA-Seq.
Additional file 1 of Methylation changes and INS-IGF2 expression predict progression in early-stage Wilms tumor
Creators: name: Jalal, Deena
name: Ali, Mohamed Y.
name: Elkinaai, Naglaa
name: Abdelaziz, Abdelaziz S.
name: Zekri, Wael
name: Sayed, Ahmed A.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 1.
Additional file 1 of Serum 25-hydroxyvitamin D and cancer-related fatigue: associations and effects on depression, anxiety, functional capacity and health-related quality of Life in breast cancer survivors during adjuvant endocrine therapy
Creators: name: Custódio, Isis Danyelle Dias
name: Nunes, Fernanda Silva Mazzutti
name: Lima, Mariana Tavares Miranda
name: de Carvalho, Kamila Pires
name: Alves, Débora Santana
name: Chiaretto, Juliana Freitas
name: Canto, Paula Philbert Lajolo
name: Paiva, Carlos Eduardo
name: de Paiva Maia, Yara Cristina
Publisher: name: figshare
Year: 2022
Subjects: subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1: Supplementary Table 1. Demographic and clinical characteristics of the breast cancer survivors during endocrine therapy, considering FACIT-Fatigue subgroups.
Preparation of an efficient catalyst through injection of CuI on modified poly (styrene-co-maleic anhydride) and theoretical investigation of the structural and electronic properties of catalyst
Creators: name: Heravi, Majid Mommahed
name: Rozita Zoghi
name: Montazeri, Naser
name: Zeydi, Masoud Mohammadi
name: Tayebeh Hosseinnejad
Publisher: name: figshare
Year: 2020
Subjects: subject: 30199 Analytical Chemistry not elsewhere classified
subject: FOS: Chemical sciences
subject: 30101 Analytical Spectrometry
subject: 30299 Inorganic Chemistry not elsewhere classified
subject: 30203 Inorganic Green Chemistry
subject: 30105 Instrumental Methods (excl. Immunological and Bioassay Methods)
subject: 30399 Macromolecular and Materials Chemistry not elsewhere classified
subject: 30204 Main Group Metal Chemistry
subject: 39901 Environmental Chemistry (incl. Atmospheric Chemistry)
subject: Environmental Chemistry

description: A novel polymer supported [poly (styrene-co-maleic imide) (SMI)]Cu(I) nano-particles was prepared via in situ reaction of 4-amino-5-methyl-4H-1,2,4-triazole-3-thione with [poly (styrene-co-maleic anhydride)] (SMA) along with immobilization of CuI. These nano-particles were fully characterized by using scanning electron microscopy (SEM), energy dispersive spectroscopy analysis, Xray (EDAX), inductively coupled plasma (ICP) analysis, 1H NMR and FT-IR techniques. Moreover, the structural and electronic features of metal–ligand interactions in the complex model of polymer-supported copper nanocatalyst were assessed using density functional theory calculations. The catalytic activity of these supported Cu(I) nonoparticles was examined in one of the classiest name reaction so–called “click reaction” which is coined K. B Sharpless for the regioselective synthesis of 1,2,3-triazole derivatives using a multicomponent reaction (MCR) involving benzyl halides, sodium azide and terminal alkynes in water as a green solvent. This heterogeneous catalyst showed excellent catalytic activity and was separated by simple filtration and was used at least in five consecutive runs without a significant decrease in its activity.
Additional file 2 of Serum 25-hydroxyvitamin D and cancer-related fatigue: associations and effects on depression, anxiety, functional capacity and health-related quality of Life in breast cancer survivors during adjuvant endocrine therapy
Creators: name: Custódio, Isis Danyelle Dias
name: Nunes, Fernanda Silva Mazzutti
name: Lima, Mariana Tavares Miranda
name: de Carvalho, Kamila Pires
name: Alves, Débora Santana
name: Chiaretto, Juliana Freitas
name: Canto, Paula Philbert Lajolo
name: Paiva, Carlos Eduardo
name: de Paiva Maia, Yara Cristina
Publisher: name: figshare
Year: 2022
Subjects: subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 2: Supplementary Table 2. Direct and reverse association between 25(OH)D and cancer-related fatigue.
МУЗЫКАЛЬНО-РИТМИЧЕСКИЕ ДВИЖЕНИЯ КАК ОСНОВА МУЗЫКАЛЬНОГО ВОСПИТАНИЯ ДЕТЕЙ ДОШКОЛЬНОГО ВОЗРАСТА
Creators: name: Тахирова, Камилла
Publisher: name: Zenodo
Year: 2024

description: актуальность статьи связана со значимостью использования нетрадиционных средств и различных методов музыкального воспитания детей, которые позволяют обогатить образовательный процесс зарядом положительных эмоций, усилить двигательную активность детей. Музыкально -ритмическая и танцевальная деятельность играют важную роль в развитии детей и являются основным фактором интеллектуального и эмоционального развития ребенка. В данной статье мы рассмотрим, как данные виды деятельности способствуют развитию творческих способностей у детей.
Additional file 1 of Classifying knowledge used in complementary medicine consultations: a qualitative systematic review
Creators: name: Davies, Kate
name: Heinsch, Milena
name: Tickner, Campbell
name: Brosnan, Caragh
name: Steel, Amie
name: Patel, Gupteswar
name: Marsh, Molly
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Pharmacology
subject: Ecology
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Cancer
subject: Science Policy

description: Additional file 1: Appendix A. Search strategy. Appendix B. Search strategy results. Appendix C. Core elements and domains identified in each study.
Tackling Algorithmic Disability Discrimination in the Hiring Process: An Ethical, Legal and Technical Analysis
Creators: name: Buyl, Maarten
name: Cociancig, Christina
name: Frattone, Cristina
name: Roekens, Nele
Publisher: name: arXiv
Year: 2022
Subjects: subject: Computers and Society (cs.CY)
subject: FOS: Computer and information sciences

description: Tackling algorithmic discrimination against persons with disabilities (PWDs) demands a distinctive approach that is fundamentally different to that applied to other protected characteristics, due to particular ethical, legal, and technical challenges. We address these challenges specifically in the context of artificial intelligence (AI) systems used in hiring processes (or automated hiring systems, AHSs), in which automated assessment procedures are subject to unique ethical and legal considerations and have an undeniable adverse impact on PWDs. In this paper, we discuss concerns and opportunities raised by AI-driven hiring in relation to disability discrimination. Ultimately, we aim to encourage further research into this topic. Hence, we establish some starting points and design a roadmap for ethicists, lawmakers, advocates as well as AI practitioners alike.
description: FAccT 2022 proceedings
Additional file 1 of Phage-induced disturbance of a marine sponge microbiome
Creators: name: Steiner, Leon X.
name: Schmittmann, Lara
name: Rahn, Tanja
name: Lachnit, Tim
name: Jahn, Martin T.
name: Hentschel, Ute
Publisher: name: figshare
Year: 2024
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 1. Text S1 Supplementary text describing methods of bioinformatic analyses, computational tools and pipelines, and databases used.
Enabling Open Science in Africa: the Sci-GaIA Open Science Platform
Creators: name: Barbera, Roberto
Publisher: name: National Academic Digital Repository
Year: 2018

description: The presentation was given at the Kick-off Meeting of the National Academic Digital Repository of Ethiopia (NADRE) project, which was held in Addis Ababa on February 19-22, 2018. It describes the Open Science Platform developed and deployed in the context of the EU-funded Sci-GaIA project and its components.
Preparation of an efficient catalyst through injection of CuI on modified poly (styrene-co-maleic anhydride) and theoretical investigation of the structural and electronic properties of catalyst
Creators: name: Heravi, Majid Mommahed
Publisher: name: figshare
Year: 2020
Subjects: subject: 30199 Analytical Chemistry not elsewhere classified
subject: FOS: Chemical sciences
subject: 30101 Analytical Spectrometry
subject: 30299 Inorganic Chemistry not elsewhere classified
subject: 30203 Inorganic Green Chemistry
subject: 30105 Instrumental Methods (excl. Immunological and Bioassay Methods)
subject: 30399 Macromolecular and Materials Chemistry not elsewhere classified
subject: 30204 Main Group Metal Chemistry
subject: 39901 Environmental Chemistry (incl. Atmospheric Chemistry)
subject: Environmental Chemistry

description: A novel polymer supported [poly (styrene-co-maleic imide) (SMI)]Cu(I) nano-particles was prepared via in situ reaction of 4-amino-5-methyl-4H-1,2,4-triazole-3-thione with [poly (styrene-co-maleic anhydride)] (SMA) along with immobilization of CuI. These nano-particles were fully characterized by using scanning electron microscopy (SEM), energy dispersive spectroscopy analysis, Xray (EDAX), inductively coupled plasma (ICP) analysis, 1H NMR and FT-IR techniques. Moreover, the structural and electronic features of metal–ligand interactions in the complex model of polymer-supported copper nanocatalyst were assessed using density functional theory calculations. The catalytic activity of these supported Cu(I) nonoparticles was examined in one of the classiest name reaction so–called “click reaction” which is coined K. B Sharpless for the regioselective synthesis of 1,2,3-triazole derivatives using a multicomponent reaction (MCR) involving benzyl halides, sodium azide and terminal alkynes in water as a green solvent. This heterogeneous catalyst showed excellent catalytic activity and was separated by simple filtration and was used at least in five consecutive runs without a significant decrease in its activity.
Persistent identifiers for researchers and research outputs
Creators: name: Barbera, Roberto
Publisher: name: National Academic Digital Repository
Year: 2018

description: The presentation was given at the Kick-off Meeting of the National Academic Digital Repository of Ethiopia (NADRE) project, which was held in Addis Ababa on February 19-22, 2018. The issue of persistent identifiers for researchers and research output is presented and discussed in order to address science reproducibility and reusability. Common solutions based on widely accepted standards are described and explained with a focus on the opportunities for the Ethiopian research communities.
Additional file 1 of Polyhydroxyalkanoate recovery from newly screened Bacillus sp. LPPI-18 using various methods of extraction from Loktak Lake sediment sample
Creators: name: Mohammed, Seid
name: Ray, Lopamudra
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified

description: Additional file 1: Table S1. Sequence similarity for the recent PHA producing isolate and other closely related strain obtained from Eztaxon-e sever.
Transductive CLIP with Class-Conditional Contrastive Learning
Creators: name: Huang, Junchu
name: Chen, Weijie
name: Yang, Shicai
name: Xie, Di
name: Pu, Shiliang
name: Zhuang, Yueting
Publisher: name: arXiv
Year: 2022
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Artificial Intelligence (cs.AI)
subject: FOS: Computer and information sciences

description: Inspired by the remarkable zero-shot generalization capacity of vision-language pre-trained model, we seek to leverage the supervision from CLIP model to alleviate the burden of data labeling. However, such supervision inevitably contains the label noise, which significantly degrades the discriminative power of the classification model. In this work, we propose Transductive CLIP, a novel framework for learning a classification network with noisy labels from scratch. Firstly, a class-conditional contrastive learning mechanism is proposed to mitigate the reliance on pseudo labels and boost the tolerance to noisy labels. Secondly, ensemble labels is adopted as a pseudo label updating strategy to stabilize the training of deep neural networks with noisy labels. This framework can reduce the impact of noisy labels from CLIP model effectively by combining both techniques. Experiments on multiple benchmark datasets demonstrate the substantial improvements over other state-of-the-art methods.
description: Published in IEEE ICASSP 2022
Additional file 1 of Satellite telemetry reveals complex mixed movement strategies in ibis and spoonbills of Australia: implications for water and wetland management
Creators: name: McGinness, Heather M.
name: Lloyd-Jones, Luke R.
name: Robinson, Freya
name: Langston, Art
name: O’Neill, Louis G.
name: Rapley, Shoshana
name: Jackson, Micha V.
name: Hodgson, Jessica
name: Piper, Melissa
name: Davies, Micah
name: Martin, John M.
name: Kingsford, Richard
name: Brandis, Kate
name: Doerr, Veronica
name: Mac Nally, Ralph
Publisher: name: figshare
Year: 2024
Subjects: subject: Ecology
subject: FOS: Biological sciences

description: Additional file 1.
Additional file 1 of Metabolic engineering of the l-serine biosynthetic pathway improves glutathione production in Saccharomyces cerevisiae
Creators: name: Kobayashi, Jyumpei
name: Sasaki, Daisuke
name: Hara, Kiyotaka Y.
name: Hasunuma, Tomohisa
name: Kondo, Akihiko
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Ecology
subject: Cancer
subject: Computational Biology

description: Additional file 1: Table S1. Primers used in this study. Table S2. Data used in Fig. 2. Table S3 Data used in Fig. 3. Table S4 Data used in Fig. 4. Table S5 Data used in Fig. 5.
Differentiable Transient Rendering
Creators: name: Yi, Shinyoung
name: Kim, Donggun
name: Choi, Kiseok
name: Jarabo, Adrian
name: Gutierrez, Diego
name: Kim, Min H.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Graphics (cs.GR)
subject: FOS: Computer and information sciences

description: Recent differentiable rendering techniques have become key tools to tackle many inverse problems in graphics and vision. Existing models, however, assume steady-state light transport, i.e., infinite speed of light. While this is a safe assumption for many applications, recent advances in ultrafast imaging leverage the wealth of information that can be extracted from the exact time of flight of light. In this context, physically-based transient rendering allows to efficiently simulate and analyze light transport considering that the speed of light is indeed finite. In this paper, we introduce a novel differentiable transient rendering framework, to help bring the potential of differentiable approaches into the transient regime. To differentiate the transient path integral we need to take into account that scattering events at path vertices are no longer independent; instead, tracking the time of flight of light requires treating such scattering events at path vertices jointly as a multidimensional, evolving manifold. We thus turn to the generalized transport theorem, and introduce a novel correlated importance term, which links the time-integrated contribution of a path to its light throughput, and allows us to handle discontinuities in the light and sensor functions. Last, we present results in several challenging scenarios where the time of flight of light plays an important role such as optimizing indices of refraction, non-line-of-sight tracking with nonplanar relay walls, and non-line-of-sight tracking around two corners.
SEPnet: A sustainable model for a collaborative physics network
Creators: name: Dunningham, Jacob
name: Keenan, Olivia
name: Soares, Cristobel
name: Benson, Veronica
name: Limbert, Michelle
name: Hepwood, Claire
Publisher: name: arXiv
Year: 2022
Subjects: subject: Physics Education (physics.ed-ph)
subject: FOS: Physical sciences

description: The South East Physics network (SEPnet) is a collaboration between nine universities in the South East of England, working together to deliver excellence in physics. By sharing resources, we are able to add much more value to our departments, students, and subject than we could achieve individually. Our core ambitions include ensuring the sustainability of physics in our region, enhancing the employability of our students, delivering advanced training, securing the pipeline of future students, opening up new research opportunities and breaking down barriers to improve the accessibility of physics for everyone. We believe that SEPnet provides a tried and tested model that could be rolled out by others to improve the academic excellence of other disciplines in different regions.
description: 9 pages
Gaia Data Release 3: External calibration of BP/RP low-resolution spectroscopic data
Creators: name: Montegriffo, P.
name: De Angeli, F.
name: Andrae, R.
name: Riello, M.
name: Pancino, E.
name: Sanna, N.
name: Bellazzini, M.
name: Evans, D. W.
name: Carrasco, J. M.
name: Sordo, R.
name: Busso, G.
name: Cacciari, C.
name: Jordi, C.
name: van Leeuwen, F.
name: Vallenari, A.
name: Altavilla, G.
name: Barstow, M. A.
name: Brown, A. G. A.
name: Burgess, P. W.
name: Castellani, M.
name: Cowell, S.
name: Davidson, M.
name: De Luise, F.
name: Delchambre, L.
name: Diener, C.
name: Fabricius, C.
name: Fremat, Y.
name: Fouesneau, M.
name: Gilmore, G.
name: Giuffrida, G.
name: Hambly, N. C.
name: Harrison, D. L.
name: Hidalgo, S.
name: Hodgkin, S. T.
name: Holland, G.
name: Marinoni, S.
name: Osborne, P. J.
name: Pagani, C.
name: Palaversa, L.
name: Piersimoni, A. M.
name: Pulone, L.
name: Ragaini, S.
name: Rainer, M.
name: Richards, P. J.
name: Rowell, N.
name: Ruz-Mieres, D.
name: Sarro, L. M.
name: Walton, N. A.
name: Yoldas, A.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Physical sciences

description: Context. Gaia Data Release 3 contains astrometry and photometry results for about 1.8 billion sources based on observations collected by the European Space Agency (ESA) Gaia satellite during the first 34 months of its operational phase (the same period covered Gaia early Data Release 3; Gaia EDR3). Low-resolution spectra for 220 million sources are one of the important new data products included in this release. Aims. In this paper, we focus on the external calibration of low-resolution spectroscopic content, describing the input data, algorithms, data processing, and the validation of the results. Particular attention is given to the quality of the data and to a number of features that users may need to take into account to make the best use of the catalogue. Methods. We calibrated an instrument model to relate mean Gaia spectra to the corresponding spectral energy distributions using an extended set of calibrators: this includes modelling of the instrument dispersion relation, transmission, and line spread functions. Optimisation of the model is achieved through total least-squares regression, accounting for errors in Gaia and external spectra. Results. The resulting instrument model can be used for forward modelling of Gaia spectra or for inverse modelling of externally calibrated spectra in absolute flux units. Conclusions. The absolute calibration derived in this paper provides an essential ingredient for users of BP/RP spectra. It allows users to connect BP/RP spectra to absolute fluxes and physical wavelengths.
description: 33 pages, 50 figures, accepted for publication by Astronomy and Astrophysics
MPEC 2024-H80 : DAILY ORBIT UPDATE (2024 April 28)
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2024
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
Additional file 1 of Adaptation on xylose improves glucose–xylose co-utilization and ethanol production in a carbon catabolite repression (CCR) compromised ethanologenic strain
Creators: name: Dev, Chandra
name: Jilani, Syed Bilal
name: Yazdani, Syed Shams
Publisher: name: figshare
Year: 2022
Subjects: subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified

description: Additional file 1: Fig. S1: Sugar consumption, ethanol production and growth profile. Strain SSK42 (A) and SCD00 (B). Growth profile is represented by OD600. Fig. S2: Sugar consumption, ethanol production and growth profile of strain SCD1200 that has been evolved on xylose and glucose in sequence. Sugars concentrations are plotted on left y-axis, while ethanol and optical density are plotted on the right y-axis. Optical density represents the growth profile. Data represents the average of two biological replicates. Fig. S3: Metabolite production profiles of strains SCD00 and SCD78. Solid lines represent the strain SCD78 while dotted lines represent the SCD00 strain. Table S1: Differentially expressed protein in strain SCD00 vs. SSK42. Only the protein with P Value lesser than 0.05 and log2 fold change of more than ± 2 are represented. Table S2: Differentially expressed protein in strain SCD78 vs. SCD00. Only the protein with P Value lesser than 0.05 and log2 fold change of more than ± 2 are represented.
SECURITY IN WIRELESS AD HOC NETWORKS - AN IMPROVEMENT TO MAODV
Creators: name: Shaik, Rahimanuddin
Publisher: name: figshare
Year: 2024
Subjects: classificationCode: 460609
subject: Networking and communications

description: Wireless ad hoc networks is a collection of communication devices (laptops, PDAs, mobile phones etc.) or nodes that wish to communicate without any fixed infrastructure and predetermined organization of available networks.Ad hoc networks can be used for data transfer, teleconferencing, Bluetooth, multimedia communication and so on. But at the same time there is a lack of centralized network management functionally, these network tend to be vulnerable to a number of security attacks in the form of data loss, privacy issues, interference eavesdropping, session hijacking and so on.Also countermeasures are not embedded, so external mechanisms are used.Authentication access control, encryption& digital signatures, biometrics verification are some preventive measures.Countermeasures beyond the prevention line are intrusion detection system, cooperation enforcement mechanisms etc. in one network. Here misuse and anomalies are detected and selfish node behavior is reduced.Most of the multicast routing protocols proposed for ad hoc networks assume a trusted, non-adversarial environment and do not take security issues into account in design.My work is going to improvise the security of MAODV. An authentication frame work for MAODV and countermeasures that prevent the impact of the attacks and dealt with.The main issue that is being dealt is to detect and rectify the problems faced by misbehaving nodes and also to prevent flooding related issues.The implementation is in the form of simulation using NS2.
Additional file 1 of I love my job. But it’s physically, mentally, and emotionally draining”: a cross-sectional survey exploring midwives’ intentions of leaving the profession in Melbourne, Australia
Creators: name: Matthews, Robyn P
name: Newton, Michelle S
name: Hyde, Rebecca L
name: Shafiei, Touran
name: Llewelyn, Fleur
name: Forster, Della A
Publisher: name: figshare
Year: 2024
Subjects: Developmental Biology

description: Supplementary Material 1.
title: The unsustainability of current migrant narratives in the EU’s Pact on Migration and Asylum
Creators: name: Levy, Caio
Publisher: name: NOVA Asylum Policy Lab, Faculdade de Ciências Sociais e Humanas, Universidade NOVA de Lisboa
Year: 2024

description: This reflection article examines the narratives about migration (re)produced by the new EU Pact on Migration and Asylum. It provides an overview of the main points proposed by the Pact, demonstrating its significance in advancing the Europeanisation of migration policies. On the other hand, it reveals how the Pact, like many other EU migration proposals, is based on problematic and incomplete narratives about migration that restrain the possibility of a holistic approach to the issue. Building up on that, the article highlights the constraints and criticisms of the Pact, with special attention to the negative consequences migrants may face as a result of its implementation. Finally, it explores ways to counteract and deconstruct these narratives to enable societies to develop a more comprehensive approach to migration
description: Levy, Caio (2024) The unsustainability of current migrant narratives in the EU’s Pact on Migration and Asylum. APL Blog, June 2024, NOVA Asylum Policy Lab, Faculdade de Ciências Sociais e Humanas, Universidade Nova de Lisboa.
Additional file 2 of I love my job. But it’s physically, mentally, and emotionally draining”: a cross-sectional survey exploring midwives’ intentions of leaving the profession in Melbourne, Australia
Creators: name: Matthews, Robyn P
name: Newton, Michelle S
name: Hyde, Rebecca L
name: Shafiei, Touran
name: Llewelyn, Fleur
name: Forster, Della A
Publisher: name: figshare
Year: 2024
Subjects: Developmental Biology

description: Supplementary Material 2.
Additional file 1 of A qualitative reflexive thematic analysis into the experiences of being identified with a BRCA1/2 gene alteration: “So many little, little traumas could have been avoided”
Creators: name: Warner, Nikolett Zsuzsanna
name: Groarke, AnnMarie
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1.
Benefits and Limitations of Simplified Transient Gas Flow Formulations
Creators: name: Hennings, Felix
Publisher: name: arXiv
Year: 2022
Subjects: subject: Optimization and Control (math.OC)
subject: FOS: Mathematics

description: Although intensively studied in recent years, the optimization of the transient (time-dependent) control of large real-world gas networks is still out of reach for current state-of-the-art approaches. For this reason, we present further simplifications of the commonly used model, which lead to a linear description of the gas flow on pipelines. In an empirical analysis of real-world data, we investigate the properties of the involved quantities and evaluate the errors made by our simplification.
Additional file 3 of I love my job. But it’s physically, mentally, and emotionally draining”: a cross-sectional survey exploring midwives’ intentions of leaving the profession in Melbourne, Australia
Creators: name: Matthews, Robyn P
name: Newton, Michelle S
name: Hyde, Rebecca L
name: Shafiei, Touran
name: Llewelyn, Fleur
name: Forster, Della A
Publisher: name: figshare
Year: 2024
Subjects: Developmental Biology

description: Supplementary Material 3.
High-pressure inelastic neutron scattering study of the anisotropic $S=1$ spin chain [Ni(HF$_2$)(3-Clpyradine)$_4$]BF$_4$
Creators: name: Pajerowski, D. M.
name: Podlesnyak, A. P.
name: Herbrych, J.
name: Manson, J.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: [Ni(HF$_2$)(3-Clpyradine)$_4$]BF$_4$ (NBCT) is a one-dimensional (1-D), $S=1$ spin chain material that shows no long-range magnetic order down to thermometer temperatures of 0.1 K. Previous ambient pressure inelastic neutron scattering experiments identified NBCT to be in the large-$D$ quantum paramagnetic phase of the $D/J$ phase diagram, where $D$ is the axial single-ion anisotropy and $J$ is the intrachain superexchange. Here, we extend the previous experiments to be at a hydrostatic pressure of 0.9 GPa. By comparing to density matrix renormalization group calculations, we find $D/J$ increases from 1.5 to 3.2 as pressure increases from 0 GPa to 0.9 GPa, which pushes the system further into the large-$D$ phase.
Additional file 1 of Nanopore direct RNA sequencing reveals N6-methyladenosine and polyadenylation landscapes on long non-coding RNAs in Arabidopsis thaliana
Creators: name: Liang, Qiaoxia
name: Zhang, Jizhou
name: Lam, Hon-Ming
name: Chan, Ting-Fung
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Supplementary Material 1
Additional file 13 of Simultaneous testing of rule- and model-based approaches for runs of homozygosity detection opens up a window into genomic footprints of selection in pigs
Creators: name: Berghöfer, Jan
name: Khaveh, Nadia
name: Mundlos, Stefan
name: Metzger, Julia
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 13: Table S13. DNA samples used for the evaluation of SNP filtering and ROH detection parameters.
Additional file 1 of Simultaneous testing of rule- and model-based approaches for runs of homozygosity detection opens up a window into genomic footprints of selection in pigs
Creators: name: Berghöfer, Jan
name: Khaveh, Nadia
name: Mundlos, Stefan
name: Metzger, Julia
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1: Table S1. Iterations for different read depth parameters.
Additional file 1 of Visual political communication on Instagram: a comparative study of Brazilian presidential elections
Creators: name: de-Lima-Santos, Mathias-Felipe
name: Gonçalves, Isabella
name: Quiles, Marcos G.
name: Mesquita, Lucia
name: Ceron, Wilson
name: Couto Lorena, Maria Clara
Publisher: name: figshare
Year: 2024
Subjects: subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Science Policy
subject: Mental Health

description: Supplementary information (PDF 422 kB)