cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1 of Evolocumab on top of empagliflozin improves endothelial function of individuals with diabetes: randomized active-controlled trial
Creators: name: Sposito, Andrei C.
name: Breder, Ikaro
name: Barreto, Joaquim
name: Breder, Jessica
name: Bonilha, Isabella
name: Lima, Marcus
name: Oliveira, Alessandra
name: Wolf, Vaneza
name: Luchiari, Beatriz
name: do Carmo, Helison R.
name: Munhoz, Daniel
name: Oliveira, Daniela
name: Coelho-Filho, Otavio R.
name: Coelho, Otavio R.
name: Matos-Souza, Jose Roberto
name: Moura, Filipe A.
name: de Carvalho, Luiz Sergio F.
name: Nadruz, Wilson
name: Quinaglia, Thiago
name: Kimura-Medorima, Sheila T.
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology

description: Additional file 1: Table S1. Absolute values at each time-point. Table S2. Medications in use at randomization. Figure S1. Study design. Figure S2. FMD Protocol. Figure S3. Flow Diagram.
Quasi-simultaneous observations of radio and X-ray variability in three radio-quiet Seyfert galaxies
Creators: name: Chen, Sina
name: Laor, Ari
name: Behar, Ehud
Publisher: name: arXiv
Year: 2022
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: Radio variability in some radio-quiet (RQ) active galactic nuclei suggests emission from regions close to the central engine, possibly the outer accretion disc corona. If the origins of the radio and the X-ray emission are physically related, their emission may be temporarily correlated, possibly with some time delays. We present the results of quasi-simultaneous radio and X-ray monitoring of three RQ Seyfert galaxies, Mrk 110, Mrk 766, and NGC 4593, carried out with the Very Large Array at 8.5 GHz over a period of about 300 days, and with the Rossi X-ray Timing Explorer at 2-10 keV over a period of about 2000 days. The radio core variability is likely detected in the highest resolution (A configuration) observations of Mrk 110 and NGC 4593, with a fractional variability amplitude of 6.3% and 9.5%, respectively. A cross-correlation analysis suggests an apparently strong (Pearson r = -0.89) and highly significant correlation (p = 1 x 10^(-6)) in Mrk 110, with the radio lagging the X-ray by 56 days. However, a further analysis of the r values distribution for physically unrelated long time delays, reveals that this correlation is not significant. This occurs since the Pearson correlation assumes white noise, while both the X-ray and the radio light curves follow red noise, which dramatically increases the chance, by a factor of ~ 10^3, to get extremely high r values in uncorrelated data sets. A significantly longer radio monitoring with a higher sampling rate, preferably with a high-resolution fixed radio array, is required in order to reliably detect a delay.
description: Accepted for publication in MNRAS
Absence of spin susceptibility decrease in a bulk organic superconductor with triangular lattice
Creators: name: Saitou, Y.
name: Ichikawa, N.
name: Yamamoto, R.
name: Kitamata, D.
name: Suzuki, M.
name: Yanagita, Y.
name: Namaizawa, T.
name: Komuro, S.
name: Furukawa, T.
name: Kato, R.
name: Itou, T.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: The study of non-s-wave unconventional superconductivities in strongly correlated-electron systems has been a central issue in condensed matter physics for more than 30 years. In such unconventional superconductivities, d-wave Cooper pairing with antiparallel spins has been often observed in various quasi-two-dimensional (quasi-2D) bulk systems. Interestingly, many theories predicted that the triangular lattice causes the d-wave pairing to be unstable and may lead to more exotic pairing such as parallel spin (spin-triplet) pairing. Here we focus on a bulk organic triangular-lattice system in which superconductivity emerges near a nonmagnetic Mott insulating phase. We demonstrate, by using low-power nuclear magnetic resonance (NMR) measurements, that the spin susceptibility of the superconducting state retains the normal state value even deep in the superconducting state. This result indicates the possibility that the material exhibits spin-triplet superconductivity. Our finding will bring insights also into understanding the 2D materials with triangular moire superlattices that are considered also to show unconventional superconductivities near Mott-like insulating states.
description: 10 pages, 6 figures
Additional file 3 of Do Danish medical students feel prepared to deliver healthcare to patients with backgrounds different from their own? A cross-sectional survey
Creators: name: Sorensen, J.
name: Hindhede, A.L.
name: Ohlendorff, J.S.
name: de Montgomery, C.J.
name: Maheswaran, S.
name: Norredam, M.
name: Krasnik, A.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Science Policy
subject: Mental Health

description: Supplementary Material 3
Coscienza e realtà. Il problema ontologico e l’insegnamento di Vasubandhu
Creators: name: Magno, Emanuela
Publisher: name: Consonanze
Year: 2020

description: -
description: Consonanze, Anantaratnaprabhava. Studi in onore di Giuliano Boccali, vol. 2, a cura di Alice Crisanti, Cinzia Pieruccini, Chiara Policardi, Paola M. Rossi (Consonanze 11.2)
A new method to correct for host star variability in multi-epoch observations of exoplanet transmission spectra
Creators: name: Panwar, Vatsal
name: Désert, Jean-Michel
name: Todorov, Kamen O.
name: Bean, Jacob L.
name: Stevenson, Kevin B.
name: Huitson, C. M.
name: Fortney, Jonathan J.
name: Bergmann, Marcel
Publisher: name: arXiv
Year: 2022
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: Transmission spectra of exoplanets orbiting active stars suffer from wavelength-dependent effects due to stellar photospheric heterogeneity. WASP-19b, an ultra-hot Jupiter (T$_{eq}$ $\sim$ 2100 K), is one such strongly irradiated gas-giant orbiting an active solar-type star. We present optical (520-900 nm) transmission spectra of WASP-19b obtained across eight epochs using the Gemini Multi-Object Spectrograph (GMOS) on the Gemini-South telescope. We apply our recently developed Gaussian Processes regression based method to model the transit light curve systematics and extract the transmission spectrum at each epoch. We find that WASP-19b's transmission spectrum is affected by stellar variability at individual epochs. We report an observed anticorrelation between the relative slopes and offsets of the spectra across all epochs. This anticorrelation is consistent with the predictions from the forward transmission models, which account for the effect of unocculted stellar spots and faculae measured previously for WASP-19. We introduce a new method to correct for this stellar variability effect at each epoch by using the observed correlation between the transmission spectral slopes and offsets. We compare our stellar variability corrected GMOS transmission spectrum with previous contradicting MOS measurements for WASP-19b and attempt to reconcile them. We also measure the amplitude and timescale of broadband stellar variability of WASP-19 from TESS photometry, which we find to be consistent with the effect observed in GMOS spectroscopy and ground-based broadband photometric long-term monitoring. Our results ultimately caution against combining multi-epoch optical transmission spectra of exoplanets orbiting active stars before correcting each epoch for stellar variability.
description: Accepted for publication in MNRAS
Additional file 4 of Selective isolation of extracellular vesicles from minimally processed human plasma as a translational strategy for liquid biopsies
Creators: name: Fortunato, Diogo
name: Giannoukakos, Stavros
name: Giménez-Capitán, Ana
name: Hackenberg, Michael
name: Molina-Vila, Miguel A.
name: Zarovni, Nataša
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Space Science
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Cancer

description: Additional file 4: Supplementary Figure 4. (A) Box plot evidencing raw counts obtained from healthy donor EV samples using both triple-coated or CD61 beads. A statistically significant difference between groups could be appreciated (p-value = 0.00053). (B) Box plot evidencing raw counts obtained from healthy donor and patient EV samples using CD61 beads. No statistically significant difference could be found between groups (p-value = 0.43).
A 2-hr binary period for the black hole transient MAXI J0637-430
Creators: name: Soria, Roberto
name: Ma, Ruican
name: Tao, Lian
name: Zhang, Shuang-Nan
Publisher: name: arXiv
Year: 2022
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We revisit various sets of published results from X-ray and optical studies of the Galactic black hole (BH) candidate MAXI J0637-430, which went into outburst in 2019. Combining the previously reported values of peak outburst luminosity, best-fitting radii of inner and outer accretion disk, viewing angle, exponential decay timescale and peak-to-peak separation of the He II 4686 disk emission line, we improve the constraints on the system parameters. We estimate a heliocentric distance d = (8.7 +/- 2.3) kpc, a projected Galactocentric distance R = (13.2 +/- 1.8) kpc and a height |z| = (3.1 +/- 0.8) kpc from the Galactic plane. It is the currently known Milky Way BH candidate located farthest from the Galactic Centre. We infer a BH mass M_1 = (5.1 +/- 1.6) M_{sun}, a spin parameter a* <~ 0.25, a donor star mass M_2 = (0.25 +/- 0.07) M_{sun}, a peak Eddington ratio lambda = 0.17 +/- 0.11 and a binary period P_{orb} = 2.2^{+0.8}_{-0.6} hr. This is the shortest period measured or estimated so far for any Galactic BH X-ray binary. If the donor star is a main-sequence dwarf, such a period corresponds to the evolutionary stage where orbital shrinking is driven by gravitational radiation and the star has regained contact with its Roche lobe (low end of the period gap). The three Galactic BHs with the shortest period (<~3 hr) are also those with the highest vertical distance from the Galactic plane (>~2 kpc). This is probably because binaries with higher binding energies can survive faster natal kicks.
description: 8 pages, 300 kB, accepted by MNRAS on 2022 July 4
Sull’epistemologia del sogno secondo il Vaiśeṣika. Appunti per una tassonomia del fenomeno onirico
Creators: name: Pellegrini, Gianni
Publisher: name: Consonanze
Year: 2020

description: -
description: Consonanze, Anantaratnaprabhava. Studi in onore di Giuliano Boccali, vol. 2, a cura di Alice Crisanti, Cinzia Pieruccini, Chiara Policardi, Paola M. Rossi (Consonanze 11.2)
Additional file 1 of The association between Toxoplasma infection and mortality: the NHANES epidemiologic follow-up study
Creators: name: Huang, Jiaofeng
name: Zheng, Jiaolong
name: Liu, Bang
name: Lu, Lingling
name: Wu, Haicong
name: Lin, Su
name: Li, Dongliang
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: Additional file 1: Table S1. Multivariate COX regression analysis grouped by the T. gondii antibody
Determining AGN luminosity histories using present-day outflow properties: a neural-network based approach
Creators: name: Zubovas, Kastytis
name: Bialopetravičius, Jonas
name: Kazlauskaitė, Monika
Publisher: name: arXiv
Year: 2022
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Physical sciences

description: Large-scale outflows driven by active galactic nuclei (AGN) can have a profound influence on their host galaxies. The outflow properties themselves depend sensitively on the history of AGN energy injection during the lifetime of the outflow. Most observed outflows have dynamical timescales longer than the typical AGN episode duration, i.e. they have been inflated by multiple AGN episodes. Here, we present a neural-network based approach to inferring the most likely duty cycle and other properties of AGN based on the observable properties of their massive outflows. Our model recovers the AGN parameters of simulated outflows with typical errors $< 25\%$. We apply the method to a sample of 59 real molecular outflows and show that a large fraction of them have been inflated by AGN shining with a rather high duty cycle $δ_{\rm AGN} > 0.2$. This result suggests that nuclear activity in galaxies is clustered hierarchically in time, with long phases of more frequent activity composed of many short activity episodes. We predict that $\sim \! 19\%$ of galaxies should have AGN-driven outflows, but half of them are fossils - this is consistent with currently available data. We discuss the possibilities to investigate AGN luminosity histories during outflow lifetimes and suggest ways to use our software to test other physical models of AGN outflows. The source code of all of the software used here is made public.
description: 15 pages, 6 figures in main text. Accepted for publication in MNRAS
Diventare è ricordare. Una versione indiana dell’anamnesi
Creators: name: Magnone, Paolo
Publisher: name: Consonanze
Year: 2020

description: -
description: Consonanze, Anantaratnaprabhava. Studi in onore di Giuliano Boccali, vol. 2, a cura di Alice Crisanti, Cinzia Pieruccini, Chiara Policardi, Paola M. Rossi (Consonanze 11.2)
The independence of oscillatory reconnection periodicity from the initial pulse
Creators: name: Karampelas, Konstantinos
name: McLaughlin, James A.
name: Botha, Gert J. J.
name: Régnier, Stéphane
Publisher: name: arXiv
Year: 2022
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: Oscillatory reconnection can manifest through the interaction between the ubiquitous MHD waves and omnipresent null points in the solar atmosphere and is characterized by an inherent periodicity. In the current study, we focus on the relationship between the period of oscillatory reconnection and the strength of the wave pulse initially perturbing the null point, in a hot coronal plasma. We use the PLUTO code to solve the fully compressive, resistive MHD equations for a 2D magnetic X-point. Using wave pulses with a wide range of amplitudes, we perform a parameter study to obtain values for the period, considering the presence and absence of anisotropic thermal conduction separately. In both cases, we find that the resulting period is independent of the strength of the initial perturbation. The addition of anisotropic thermal conduction only leads to an increase in the mean value for the period, in agreement with our previous study. We also consider a different type of initial driver and we obtain an oscillation period matching the independent trend previously mentioned. Thus, we report for the first time on the independence between the type and strength of the initializing wave pulse and the resulting period of oscillatory reconnection in a hot coronal plasma. This makes oscillatory reconnection a promising mechanism to be used within the context of coronal seismology.
description: 19 pages, 14 figures, accepted for publication in ApJ
Water UV-shielding in the terrestrial planet-forming zone: Implications for carbon dioxide emission
Creators: name: Bosman, Arthur D.
name: Bergin, Edwin A.
name: Calahan, Jenny K.
name: Duval, Sara E.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: Carbon Dioxide is an important tracer of the chemistry and physics in the terrestrial planet forming zone. Using a thermo-chemical model that has been tested against the mid-infrared water emission we re-interpret the CO2 emission as observed with Spitzer. We find that both water UV-shielding and extra chemical heating significantly reduce the total CO2 column in the emitting layer. Water UV-shielding is the more efficient effect, reducing the CO2 column by $\sim$ 2 orders of magnitude. These lower CO2 abundances lead to CO2-to-H2O flux ratios that are closer to the observed values, but CO2 emission is still too bright, especially in relative terms. Invoking the depletion of elemental oxygen outside of the water mid-plane iceline more strongly impacts the CO2 emission than it does the H2O emission, bringing the CO2-to-H2O emission in line with the observed values. We conclude that the CO2 emission observed with Spitzer-IRS is coming from a thin layer in the photo-sphere of the disk, similar to the strong water lines. Below this layer, we expect CO2 not to be present except when replenished by a physical process. This would be visible in the $^{13}$CO2 spectrum as well as certain $^{12}$CO2 features that can be observed by JWST-MIRI.
description: 8 pages, 4 figures, accepted for publication in ApJL
Additional file 1 of Semaphorin 4D is upregulated in neurons of diseased brains and triggers astrocyte reactivity
Creators: name: Evans, Elizabeth E.
name: Mishra, Vikas
name: Mallow, Crystal
name: Gersz, Elaine M.
name: Balch, Leslie
name: Howell, Alan
name: Reilly, Christine
name: Smith, Ernest S.
name: Fisher, Terrence L.
name: Zauderer, Maurice
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases

description: Additional File 1: Fig. S1. Sema4D Is Expressed On Olig2-Positive Oligodendrocytes Of Dentate Gyrus Regions In HD Mice.
A Chemical Map of the Outbursting V883 Ori system: Vertical and Radial Structures
Creators: name: Ruiz-Rodriguez, D. A.
name: Williams, J. P.
name: Kastner, J. H.
name: Cieza, L.
name: Leemker, M.
name: Principe, D. A.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We present the first results of a pilot program to conduct an Atacama Large Millimeter/submillimeter Array (ALMA) Band 6 (211-275 GHz) spectral line study of young stellar objects (YSO) that are undergoing rapid accretion episodes, i.e. FU Ori objects (FUors). Here, we report on molecular emission line observations of the FUor system, V883 Ori. In order to image the FUor object with full coverage from ~0.5 arcsec to the map size of ~30 arcsec, i.e. from disc to outflow scales, we combine the ALMA main array (the 12-m array) with the Atacama Compact Array (7-m array) and the total power (TP) array. We detect HCN, HCO$^{+}$, CH$_{3}$OH, SO, DCN, and H$_{2}$CO emissions with most of these lines displaying complex kinematics. From PV diagrams, the detected molecules HCN, HCO$^{+}$, CH$_{3}$OH, DCN, SO, and H$_{2}$CO probe a Keplerian rotating disc in a direction perpendicular to the large-scale outflow detected previously with the $^{12}$CO and $^{13}$CO lines. Additionally, HCN and HCO$^{+}$ reveal kinematic signatures of infall motion. The north outflow is seen in HCO$^{+}$, H$_{2}$CO, and SO emissions. Interestingly, HCO$^{+}$ emission reveals a pronounced inner depression or "hole" with a size comparable to the radial extension estimated for the CH$_{3}$OH and 230 GHz continuum. The inner depression in the integrated HCO$^{+}$ intensity distribution of V883 Ori is most likely the result of optical depth effects, wherein the optically thick nature of the HCO$^{+}$ and continuum emission towards the innermost parts of V883 Ori can result in a continuum subtraction artifact in the final HCO$^{+}$ flux level.
The “Frame” Status of Veda-Originated Knowledge in Mīmāṃsā
Creators: name: Freschi, Elisa
Publisher: name: Consonanze
Year: 2020

description: -
description: Consonanze, Anantaratnaprabhava. Studi in onore di Giuliano Boccali, vol. 2, a cura di Alice Crisanti, Cinzia Pieruccini, Chiara Policardi, Paola M. Rossi (Consonanze 11.2)
A truncated inner disc in the Seyfert 1 galaxy WKK 4438
Creators: name: Gallo, L. C.
name: Buhariwalla, M. Z.
name: Jiang, J.
name: D'Ammando, F.
name: Walton, D. J.
Publisher: name: arXiv
Year: 2022
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: Understanding if and when the accretion disc extends down to the innermost stable circular orbit (ISCO) is important since it is the fundamental assumption behind measuring black hole spin. Here, we examine the 2013 and 2018 NuSTAR and Swift data (0.5 - 50 keV) of the narrow-line Seyfert 1 galaxy, WKK 4438. The X-ray emission can be fitted well with models depicting a corona and blurred reflection originating from a disc around a low spin (a* ~ 0) black hole. However, such models result in unconventional values for some of the parameters (e.g. inverted emissivity profile and high coronal height). Alternatively, equally good fits can be achieved if the disc is truncated at ~10 rg and the black hole is spinning at the Thorne limit (a* = 0.998). In these cases, the model parameters are consistent with the interpretation that the corona is centrally located close to the black hole and illuminating the disc at a larger distance.
description: 8 pages, 5 figures. Accepted for publication in MNRAS
Additional file 1 of Preclinical evaluation and automated synthesis of [89Zr]ZrDFOSquaramide-girentuximab for diagnostic imaging of carbonic anhydrase IX positive tumours
Creators: name: Noor, Asif
name: McGowan, Emily R.
name: Van Zuylekom, Jessica K.
name: Cullinane, Carleen
name: Roselt, Peter D.
name: Hicks, Rodney J.
name: Wheatcroft, Michael P.
name: Donnelly, Paul S.
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Plant Biology
subject: FOS: Biological sciences

description: Supplementary Material 1
Photometric and spectroscopic study of the burst-like brightening of two Gaia-alerted young stellar objects
Creators: name: Nagy, Zsófia
name: Ábrahám, Péter
name: Kóspál, Ágnes
name: Park, Sunkyung
name: Siwak, Michał
name: de Miera, Fernando Cruz-Sáenz
name: Fiorellino, Eleonora
name: García-Álvarez, David
name: Szabó, Zsófia Marianna
name: Antoniucci, Simone
name: Giannini, Teresa
name: Giunta, Alessio
name: Kriskovics, Levente
name: Kun, Mária
name: Marton, Gábor
name: Moór, Attila
name: Nisini, Brunella
name: Pál, Andras
name: Szabados, László
name: Zielinski, Paweł
name: Wyrzykowski, Łukasz
Publisher: name: arXiv
Year: 2022
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: Young stars show variability on different time-scales from hours to decades, with a range of amplitudes. We studied two young stars, which triggered the Gaia Science Alerts system due to brightenings on a time-scale of a year. Gaia20bwa brightened by about half a magnitude, whereas Gaia20fgx brightened by about two and half magnitudes. We analyzed the Gaia light curves, additional photometry, and spectra taken with the Telescopio Nazionale Galileo and the Gran Telescopio Canarias. Several emission lines were detected toward Gaia20bwa, including hydrogen lines from H$α$ to H$δ$, Pa$β$, Br$γ$, and lines of Ca II, O I, and Na I. The H$α$ and Br$γ$ lines were detected toward Gaia20fgx in emission in its bright state, with additional CO lines in absorption, and the Pa$β$ line with an inverse P Cygni profile during its fading. Based on the Br$γ$ lines the accretion rate was $(2.4-3.1)\times10^{-8}$ $M_\odot$ yr$^{-1}$ for Gaia20bwa and $(4.5-6.6)\times10^{-8}$ $M_\odot$ yr$^{-1}$ for Gaia20fgx during their bright state. The accretion rate of Gaia20fgx dropped by almost a factor of 10 on a time-scale of half a year. The accretion parameters of both stars were found to be similar to those of classical T Tauri stars, lower than those of young eruptive stars. However, the amplitude and time-scale of these brightenings place these stars to a region of the parameter space, which is rarely populated by young stars. This suggests a new class of young stars, which produce outbursts on a time-scale similar to young eruptive stars, but with smaller amplitudes.
description: Accepted to MNRAS
Additional file 3 of Selective isolation of extracellular vesicles from minimally processed human plasma as a translational strategy for liquid biopsies
Creators: name: Fortunato, Diogo
name: Giannoukakos, Stavros
name: Giménez-Capitán, Ana
name: Hackenberg, Michael
name: Molina-Vila, Miguel A.
name: Zarovni, Nataša
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Space Science
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Cancer

description: Additional file 3: Supplementary Figure 3. mRNA profiles of CD61+ and CD9, CD63 or CD81+ EVs obtained from healthy donor plasma: exploratory data analysis and normalization. (A to D) Principal component analysis (PCA) was performed on unnormalized gene counts for exploratory data analysis. Principal components PC1 and PC2 were plotted on the X and Y axis, respectively. Different variables were evidenced: (A) Gene counts excluding internally-defined nCounter control genes, (B) Total read count per sample, (C) Sample groups, which in this case represented the antibodies immobilized on IP beads. Triple-coated (CD9, CD63 and CD81) or CD61-coated beads, (D) Due to a maximum number of 12 slots per nCounter experiment, samples were processed in different batches. Each batch represents one individual nCounter run. (E) Relative log expression (RLE) plots for visualization of the normalization performance with DESeq2 (left). Normalized count data was projected on PC1 and PC2 after PCA (right). Triple-coated and CD61 samples were represented in green and orange, respectively.
Additional file 2 of Semaphorin 4D is upregulated in neurons of diseased brains and triggers astrocyte reactivity
Creators: name: Evans, Elizabeth E.
name: Mishra, Vikas
name: Mallow, Crystal
name: Gersz, Elaine M.
name: Balch, Leslie
name: Howell, Alan
name: Reilly, Christine
name: Smith, Ernest S.
name: Fisher, Terrence L.
name: Zauderer, Maurice
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases

description: Additional File 2: Fig. S2. SEMA4D, NeuN+ neuronal density and latency errors in Radial Arm Water Maze in AD mice. (PDF 81 KB)
Covariances of density probability distribution functions. Lessons from hierarchical models
Creators: name: Bernardeau, Francis
Publisher: name: arXiv
Year: 2022
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: Data Analysis, Statistics and Probability (physics.data-an)
subject: FOS: Physical sciences

description: Context: Statistical properties of the cosmic density fields are to a large extent encoded in the shape of the one-point density probability distribution functions (PDF). In order to successfully exploit such observables, a detailed functional form of the covariance matrix of the one-point PDF is needed. Aims: The objectives are to model the properties of this covariance for general stochastic density fields in a cosmological context. Methods: Leading and subleading contributions to the covariance were identified within a large class of models, the so-called hierarchical models. The validity of the proposed forms for the covariance matrix was assessed with the help of a toy model, the minimum tree model, for which a corpus of exact results could be obtained (forms of the one- and two-point PDF, large-scale density-bias functions, and full covariance matrix of the one-point PDF). Results: It is first shown that the covariance matrix elements are directly related to the spatial average of the two-point density PDF within the sample. The dominant contribution to this average is explicitly given for hierarchical models, which leads to the construction of specific density-bias functions. However, this contribution alone cannot be used to construct an operational likelihood function. Short distance effects are found to be have an important impact but are more difficult to derive as they depend more on the details of the model. However, a simple and generic form of these contributions is proposed. Detailed comparisons in the context of the Rayleigh-Levy flight model show that the large-scale effects capture the bulk of the supersample effects and that, by adding the short-distance contributions, a qualitatively correct model of the likelihood function can be obtained.
description: Theory paper supported by numerical experiments, 22 pages and 12 figures. Accepted for publication in A&A
Additional file 3 of Semaphorin 4D is upregulated in neurons of diseased brains and triggers astrocyte reactivity
Creators: name: Evans, Elizabeth E.
name: Mishra, Vikas
name: Mallow, Crystal
name: Gersz, Elaine M.
name: Balch, Leslie
name: Howell, Alan
name: Reilly, Christine
name: Smith, Ernest S.
name: Fisher, Terrence L.
name: Zauderer, Maurice
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases

description: Additional File 3: Fig. S3. GFAP and morphologic assessments in human astrocyte cultures.
Additional file 4 of Semaphorin 4D is upregulated in neurons of diseased brains and triggers astrocyte reactivity
Creators: name: Evans, Elizabeth E.
name: Mishra, Vikas
name: Mallow, Crystal
name: Gersz, Elaine M.
name: Balch, Leslie
name: Howell, Alan
name: Reilly, Christine
name: Smith, Ernest S.
name: Fisher, Terrence L.
name: Zauderer, Maurice
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases

description: Additional File 4: Fig. S4 and methods. PLXN-B1 expression and morphologic assessments in rat astrocyte cultures.
Dust coagulation and fragmentation in a collapsing cloud core and their influence on non-ideal magnetohydrodynamic effects
Creators: name: Kawasaki, Yoshihiro
name: Koga, Shunta
name: Machida, Masahiro N.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We determine the time evolution of the dust particle size distribution during the collapse of a cloud core, accounting for both dust coagulation and dust fragmentation, to investigate the influence of dust growth on non-ideal magnetohydrodynamic effects.The density evolution of the collapsing core is given by a one-zone model. We assume two types of dust model: dust composed only of silicate (silicate dust) and dust with a surface covered by $\mathrm{H_{2}O}$ ice ($\mathrm{H_{2}O}$ ice dust). When only considering collisional coagulation, the non-ideal magnetohydrodynamic effects are not effective in the high-density region for both the silicate and $\mathrm{H_{2}O}$ ice dust cases. This is because dust coagulation reduces the abundance of small dust particles, resulting in less efficient adsorption of charged particles on the dust surface. For the silicate dust case, when collisional fragmentation is included, the non-ideal magnetohydrodynamic effects do apply at a high density of $n_{\mathrm{H}}>10^{12} \ \mathrm{cm^{-3}}$ because of the abundant production of small dust particles. On the other hand, for the $\mathrm{H_{2}O}$ ice dust case, the production of small dust particles due to fragmentation is not efficient. Therefore, for the $\mathrm{H_{2}O}$ ice dust case, non-ideal magnetohydrodynamic effects apply only in the range $n_{\mathrm{H}}\gtrsim 10^{14} \ \mathrm{cm^{-3}}$, even when collisional fragmentation is considered. Our results suggest that it is necessary to consider both dust collisional coagulation and fragmentation to activate non-ideal magnetohydrodynamic effects, which should play a significant role in the star and disk formation processes.
description: Accepted for publication in MNRAS. 17 pages, 11 figures
title: Rezension: "„Aleksander Brückner revisited“ – Debatten um Polen und Polentum in Geschichte und Gegenwart / Yvonne Kleinmann, Achim Rabus (Hrsg.) Göttingen: Wallstein Verlag, 2015. ISBN: 978-3-8353-1771-0
Creators: name: Rhode, Maria
name: Digitale Wissenschaftsplattform Pol-Int (  Www.Pol-Int.Org  )
Publisher: name: Europa-Universität Viadrina Frankfurt
Year: 2020

description: Zu besprechen ist ein Sammelband, der zweierlei abbildet. Er spiegelt einerseits das Ergebnis einer Tagung wider, die 2014 – anlässlich des 75. Todestags des namengebenden Gelehrten – am Aleksander-Brückner-Zentrum in Jena stattgefunden hat. Zugleich eröffnet er eine neue Reihe, die es sich zum Ziel gesetzt hat, „Polen jenseits nationaler Paradigmen im Plural zu denken [...]" (S. 7) und der Anregung der Area Studies folgend als einen Raum zu sehen, der sich abhängig vom historischen, kulturellen und politischen Zusammenhang immer neu konstituiert. Die Ergebnisse dieser Tagung für die Eröffnung einer so konzipierten neuen Reihe zu nehmen, leuchtet ungetrübt ein, erscheint uns Brückner doch mit seiner transnationalen Biografie und seinem interdisziplinären Ansatz, Sprache einerseits im Kontext einer breit verstandenen Geschichte und Kultur und andererseits Geschichte im Kontext von Sprache zu sehen, geradezu (post)modern. Doch von solch instrumentellem Einsatz einer als Eigenlob verstandenen Moderne ist die Konzeption des Bandes glücklicherweise weit entfernt. Die Herausgeber, die Historikerin Yvonne Kleinmann und der Slawist Achim Rabus, verfolgen vielmehr zwei Anliegen. Ihnen geht es erstens darum, Brückner zu historisieren, d.h. seine Forschungsbeiträge im Kontext einer vielfältigen Beziehungsgeschichte zu sehen, und zweitens seinen interdisziplinären Ansatz für heutige Untersuchungen mit den Instrumentarien der Philologie, Linguistik, Ethnologie und Geschichte fruchtbar zu machen. Und so gliedert sich der Band in drei Teile: „Gelehrsamkeit, Polonität und Politik bei Aleksander Brückner" (Untersuchungen von David Frick, Michael G. Müller, Achim Rabus, Yvonne Kleinmann), „Brückner als Sprachwissenschaftler – Sprachwissenschaft nach Brückner" (Beiträge von Marek Łaziński, Anna Piechnik) sowie den umfangreichsten, mit fünf Beiträgen abgebildeten Teil: „Polonität und andere (Selbst)Zuschreibungen in Geschichte und Gegenwart" (Aufsätze von Mirja Lecke, Katrin Steffen, Olena Duć-Fajfer, Agnieszka Halemba, Ewa Dzięgiel).
Additional file 4 of Personalized circulating tumor DNA analysis for sensitive disease monitoring and detection of relapse in neuroblastoma
Creators: name: Rahmqvist, Ida
name: Engström, Enya
name: Mellström, Elisabeth
name: Ibrahim, Raghda R.
name: Pujol-Calderón, Fani
name: Dahlstrand Rudin, Agnes
name: Ordqvist Redfors, Anna
name: Rostamzadeh, Niki
name: Di Rienzo, Rita
name: Franssila, Wilma
name: Khashan, Robert
name: Xylander, Moe
name: Karlsson, Christin
name: Ek, Torben
name: Andersson, Daniel
name: Österlund, Tobias
name: Gaarder, Jennie
name: Fagman, Henrik
name: Fransson, Susanne
name: Martinsson, Tommy
name: Ståhlberg, Anders
name: Dalin, Martin
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Mental Health
subject: Virology

description: Supplementary Material 4
title: Review: "Facing the East in the West: Images of Eastern Europe in British Literature, Film and Culture" / Barbara Korte, Eva U. Pirker, Sissy Helff (ed.). Leiden: Brill/Rodopi, 2010. ISBN: 978-9042030497
Creators: name: Cybowski, Milosz K.
name: Digitale Wissenschaftsplattform Pol-Int (  Www.Pol-Int.Org  )
Publisher: name: Europa-Universität Viadrina Frankfurt
Year: 2020

description: Facing the East in the West is a collection of twenty-nine short essays devoted to various perceptions of the widely defined "East" in Britain. Most papers in this volume deal with contemporary sources and representations, while only a few of them go back in time to look at historical perceptions (usually not older than the late nineteenth century). As a result, despite occasional glimpses into the past, Facing the East in the West may be considered a significant contribution to an understanding of the ways in which British contemporary culture perceives the East. Or, taking into account the year of publication, the ways in which British culture perceived the East in the years that followed the accession to the European Union of a number of post-communist states.
title: Rezenzja: "Post-Communist Poland – Contested Pasts and Future Identities" / Ewa Ochman. London, New York: Routledge, 2013. ISBN: 9780415658744
Creators: name: Pawłuszko, Tomasz
name: Digitale Wissenschaftsplattform Pol-Int (  Www.Pol-Int.Org  )
Publisher: name: Europa-Universität Viadrina Frankfurt
Year: 2020

description: Recenzowana książka Ewy Ochman pt. Post-Communist Poland – Contested Pasts and Future Identities została wydana po raz pierwszy w 2013 roku w serii wydawniczej BASEES: Routledge Series on Russian and East European Studies. Autorka jest pracownikiem naukowym Katedry Studiów Rosyjskich i Wschodnioeuropejskich Uniwersytetu w Manchesterze. Książka jest próbą analizy procesu rekonstrukcji tożsamości kraju postkomunistycznego na przełomie XX i XXI wieku na przykładzie Polski. Praca składa się z dziewięciu rozdziałów zorganizowanych w trzy części. W pierwszej części autorka przygląda się procesom odtwarzania pamięci, symboli oraz tożsamości Polski i Polaków po upadku PRL, w drugiej analizuje polskie akty prawne i działania polityczne dotyczące „pamięci narodowej", w trzeciej przedstawia studium przypadku omawianych problemów na przykładzie miasta Gliwice i regionu Górnego Śląska. Ochman skupiła sięna kwestiach związanych z II wojną światową i jej bezpośrednimi konsekwencjami, analizując przy tym pomniki, nazwy ulic inspirowane ideologią komunistyczną oraz cmentarze wojsk radzieckich, które po upadku ZSRR pozostały na polskiej ziemi, a ich sens ideologiczny zyskał w III RP inny wymiar niż w czasach PRL.
title: Recenzja: "Die Erfindung der Ziemia Lubuska. Konstruktion und Aneignung einer polnischen Region 1945–1975"/ Kerstin Hinrichsen. Göttingen: Vandenhoeck & Ruprecht, 2017. ISBN: 9783847106548
Creators: name: Kmak-Pamirska, Aleksandra
name: Digitale Wissenschaftsplattform Pol-Int (  Www.Pol-Int.Org  )
Publisher: name: Europa-Universität Viadrina Frankfurt
Year: 2020

description: Recenzja zbiorowa publikacji: Kerstin Hinrichsten, Die Erfindung der Ziemia Lubuska. Konstruktion, 2017 und Aneignung einer polnischer Region 1945–1975 i Marta J. Bąkiewicz (red.), An der mittleren Oder. Eine Kulturlandschaft im deutsch-polnischen Grenzraum, 2016. Publikacje, które tutaj recenzuję, łączą w sobie różne pola badawcze, ale cechują się odmienną perspektywą. Książka kulturoznawczyni i historyczki Europy Środkowo-Wschodniej Kerstin Hinrichsen pt. „Die Erfindung der Ziemia Lubuska. Konstruktion und Aneignung einer polnischer Region 1945-1975" analizuje tworzenie nowego regionu na mapie, a zarazem w świadomości społecznej Polaków po 1945 r. Rozważając tę kwestię, trzeba skupić się nie tylko na konstrukcji regionu, ale i podmiotach biorących udział w procesie tworzenia, okresie tworzenia, narzędziach, instrumentach w nim wykorzystywanych oraz celu – planowanym efekcie. Autorka skrupulatnie bada i omawia te zagadnienia, co jest dużym atutem publikacji. Wychodząc od problemu zmian terytorialnych po II wojnie światowej, wysiedleń i osiedleń ludności z terenów wschodnich i zachodnich Polski, będących efektem porozumień międzynarodowych – konferencji w Poczdamie, przechodzi do kwestii tworzenia nowego regionu, na tzw. Ziemiach Odzyskanych. Autorka dookreśla nazwę Ziemi Lubuskiej nawiązującą do nazwy średniowiecznego słowiańskiego plemienia Lubuszan, których gród mieścił się po lewej stronie Odry, następnie opisuje zasięg terytorialny nowego województwa zielonogórskiego oraz nowoprzybyłą ludność.
title: Review: "Routledge International Handbook of Memory Studies" / Anna Lisa Tota, Trever Hagen (ed.). Oxford: Routledge, 2016. ISBN: 9780415870894
Creators: name: Zessin-Jurek, Lidia
name: Digitale Wissenschaftsplattform Pol-Int (  Www.Pol-Int.Org  )
Publisher: name: Europa-Universität Viadrina Frankfurt
Year: 2020

description: Is memory an example of successful adaptation among homo sapiens? – this hypothesis permeates the 40 chapters of the Routledge International Handbook of Memory Studies. This volume edited by Anna Lisa Tota and Trever Hagen approaches the field of memory studies from multiple perspectives, from sociology and philosophy to psychology and biology even. The book is divided into six parts, complemented with index, illustrations, all carefully edited. Part One presents a number of theories and perspectives. Here, main concepts of memory studies are discussed with the hindsight of several decades that have passed since they first stormed social sciences. Collective, communicative and cultural memory as well as their relation to history all receive attention there. Patrick H. Hutton's thorough analysis of Pierre Nora's 'sites of memory thirty years after' deserves special praise for its careful reconstruction of the process in which this concept arose, as well as for a succinct and effective exploration of the criticism surrounding Nora's theory. Similarly, Jeffrey Olick's reflection on different national traditions with regards to history and their impact on how memory is being 'performed' in various countries contains revealing insights. Ann Rigney's interpretation of culture and memory as non-genetic inheritance is a must for understanding the volume as a whole.
A Probabilistic Machine Learning Approach to Scheduling Parallel Loops with Bayesian Optimization
Creators: name: Kim, Kyurae
name: Kim, Youngjae
name: Park, Sungyong
Publisher: name: arXiv
Year: 2022
Subjects: subject: Distributed, Parallel, and Cluster Computing (cs.DC)
subject: Performance (cs.PF)
subject: FOS: Computer and information sciences
subject: D.4.9; D.4.8

description: This paper proposes Bayesian optimization augmented factoring self-scheduling (BO FSS), a new parallel loop scheduling strategy. BO FSS is an automatic tuning variant of the factoring self-scheduling (FSS) algorithm and is based on Bayesian optimization (BO), a black-box optimization algorithm. Its core idea is to automatically tune the internal parameter of FSS by solving an optimization problem using BO. The tuning procedure only requires online execution time measurement of the target loop. In order to apply BO, we model the execution time using two Gaussian process (GP) probabilistic machine learning models. Notably, we propose a locality-aware GP model, which assumes that the temporal locality effect resembles an exponentially decreasing function. By accurately modeling the temporal locality effect, our locality-aware GP model accelerates the convergence of BO. We implemented BO FSS on the GCC implementation of the OpenMP standard and evaluated its performance against other scheduling algorithms. Also, to quantify our method's performance variation on different workloads, or workload-robustness in our terms, we measure the minimax regret. According to the minimax regret, BO FSS shows more consistent performance than other algorithms. Within the considered workloads, BO FSS improves the execution time of FSS by as much as 22% and 5% on average.
description: Part of TPDS Special Section on Parallel and Distributed Computing Techniques for AI, ML, and DL
Additional file 1 of What is the best technic to dislodge Staphylococcus epidermidis biofilm on medical implants?
Creators: name: Moris, Vivien
name: Lam, Mylan
name: Amoureux, Lucie
name: Magallon, Arnaud
name: Guilloteau, Adrien
name: Maldiney, Thomas
name: Zwetyenga, Narcisse
name: Falentin-Daudre, Céline
name: Neuwirth, Catherine
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Figure A. Staphylococcus epidermidis aspect on confocal microscopy.Figure B. Silicone patch showed natural absorption of crystal violet. Figure C.SEM (200 µm) on the left and a SEM (50 µm) picture on the right shows the formation and removal of biofilms (white spots on images) on silicone for Staphylococcus epidermidis with beads. We can observe the presence of bacteria inside the EPS 3D formation on the right picture. Table A. Results of the different treatments in a 14 hours Staphylococcus epidermidis biofilm removal on piccline, PIV, silicone and endotracheal tube. Table B. Results of the different treatments in a 5 days Staphylococcus epidermidis biofilm removal on piccline, PIV, silicone and endotracheal tube.