cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Dissipative lateral walls are sufficient to trigger convection in vibrated granular gases
Creators: name: Pontuale, G.
name: Gnoli, Andrea
name: Reyes, Francisco Vega
name: Puglisi, Andrea
Publisher: name: arXiv
Year: 2017
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: Buoyancy-driven (thermal) convection in dilute granular media, fluidized by a vibrating base, is known to appear without the need of lateral boundaries in a restricted region of parameters (inelasticity, gravity, intensity of energy injection). We have recently discovered a second buoyancy-driven convection effect which occurs at any value of the parameters, provided that the impact of particles with the lateral walls is inelastic (Pontuale et al., Phys. Rev. Lett. 117, 098006 (2016)). It is understood that this novel convection effect is strictly correlated to the existence of perpendicular energy fluxes: a vertical one, induced by both bulk and wall inelasticity, and a horizontal one, induced only by dissipation at the walls. Here we first review those previous results, and then present new experimental and numerical data concerning the variations of box geometry, intensity of energy injection, number of particles and width of the box.
description: 4 pages, 4 figures, conference Powders and Grains 2017
title: How Does Faith Feel?
title: The Language and Affect of Belief
titleType: Subtitle
Creators: name: Schultz, Callan
Publisher: name: Freie Universität Berlin
Year: 2019
Subjects: subject: Borneo
subject: Malaysia
subject: Dusun
subject: Christianity
subject: religion
subject: affect
subject: language
subject: belief
subject: 300 Sozialwissenschaften::300 Sozialwissenschaften, Soziologie::300 Sozialwissenschaften

description: Research on emotion in anthropology has been supplanted by an ethnographic turn toward ‘subjectivity’, ‘embodiment’, ‘personhood’, and ‘experience’. In this article, I explore how these interrelated modes of analysis can help ethnographers to better understand the cultural processes that constitute how people feel. I show that among my Christian Dusun interlocutors in Ranau, Malaysian Borneo, the interactive engagement between subjects and their environment determined the vectors of emotional possibility in terms of belief. The intersection of religious objects (God, the Holy Spirit, Satan) and mutual obligations in the community produce what I refer to as the ‘faith network’. I trace these collective attachments to consider how ‘believing in’ regulates feeling in relation to situations of crisis, impasse, and tragedy. The combined efforts of my interlocutors, I suggest, created an active commitment that pulsated through the faith network, which sustained an intensive and defining mode of their relational experience.
Molecular-Cloud-Scale Chemical Composition II: Mapping Spectral Line Survey toward W3(OH) in the 3 mm Band
Creators: name: Nishimura, Yuri
name: Watanabe, Yoshimasa
name: Harada, Nanase
name: Shimonishi, Takashi
name: Sakai, Nami
name: Aikawa, Yuri
name: Kawamura, Akiko
name: Yamamoto, Satoshi
Publisher: name: arXiv
Year: 2017
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: In order to study a molecular-cloud-scale chemical composition, we have conducted a mapping spectral line survey toward the Galactic molecular cloud W3(OH), which is one of the most active star forming regions in the Perseus arm, with the NRO 45 m telescope. We have observed the area of 16' $\times$ 16', which corresponds to 9.0 pc $\times$ 9.0 pc. The observed frequency ranges are 87--91, 96--103, and 108--112 GHz. We have prepared the spectrum averaged over the observed area, in which 8 molecular species CCH, HCN, HCO$^+$, HNC, CS, SO, C$^{18}$O, and $^{13}$CO are identified. On the other hand, the spectrum of the W3(OH) hot core observed at a 0.17 pc resolution shows the lines of various molecules such as OCS, H$_2$CS CH$_3$CCH, and CH$_3$CN, in addition to the above species. In the spatially averaged spectrum, emission of the species concentrated just around the star-forming core such as CH$_3$OH and HC$_3$N is fainter than in the hot core spectrum, whereas emission of the species widely extended over the cloud such as CCH is relatively brighter. We have classified the observed area into 5 subregions according to the integrated intensity of $^{13}$CO, and have evaluated the contribution to the averaged spectrum from each subregion. The CCH, HCN, HCO$^+$, and CS lines can be seen even in the spectrum of the subregion with the lowest $^{13}$CO integrated intensity range ($< 10$ K km s$^{-1}$). Thus, the contributions of the spatially extended emission is confirmed to be dominant in the spatially averaged spectrum.
description: 21 pages, 16 figures, 5 tables. Accepted for publication in ApJ
title: Numération
title: To count
titleType: AlternativeTitle
Creators: name: Moyse-Faurie, Claire
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2023
Subjects: subject: Haméa
subject: cir

description: Numération
description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
Isotropic Huygens dipoles and multipoles with colloidal particles
Creators: name: Dezert, Romain
name: Richetti, Philippe
name: Baron, Alexandre
Publisher: name: arXiv
Year: 2017
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Huygens sources are elements that scatter light in the forward direction as used in the Huygens-Fresnel principle. They have remained fictitious until recently where experimental systems have been fabricated. In this letter, we propose isotropic meta-atoms that act as Huygens sources. Using clusters of plasmonic or dielectric colloidal particles, Huygens dipoles that resonate at visible frequencies can be achieved with scattering cross-sections as high as 5 times the geometric cross-section of the particle surpassing anything achievable with a hypothetical simple spherical particle. Examples are given that predict extremely broadband scattering in the forward direction over a 1000 nm wavelength range at optical frequencies. These systems are important to the fields of nanoantennas, metamaterials and wave physics in general as well as any application that requires local control over the radiation properties of a system as in solar cells or bio-sensing.
title: Le respect
title: Politeness and respect for others
titleType: AlternativeTitle
Creators: name: Moyse-Faurie, Claire
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2023
Subjects: subject: Haméa
subject: cir

description: Le respect des autres et la politesse
description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
Page Stream Segmentation with Convolutional Neural Nets Combining Textual and Visual Features
Creators: name: Wiedemann, Gregor
name: Heyer, Gerhard
Publisher: name: arXiv
Year: 2017
Subjects: subject: Computation and Language (cs.CL)
subject: FOS: Computer and information sciences
subject: I.5.4

description: In recent years, (retro-)digitizing paper-based files became a major undertaking for private and public archives as well as an important task in electronic mailroom applications. As a first step, the workflow involves scanning and Optical Character Recognition (OCR) of documents. Preservation of document contexts of single page scans is a major requirement in this context. To facilitate workflows involving very large amounts of paper scans, page stream segmentation (PSS) is the task to automatically separate a stream of scanned images into multi-page documents. In a digitization project together with a German federal archive, we developed a novel approach based on convolutional neural networks (CNN) combining image and text features to achieve optimal document separation results. Evaluation shows that our PSS architecture achieves an accuracy up to 93 % which can be regarded as a new state-of-the-art for this task.
description: Full paper version: 6 pages, 3 figures, 2 tables
Additional file 1: of CONTRACT Study - CONservative TReatment of Appendicitis in Children (feasibility): study protocol for a randomised controlled Trial
Creators: name: Hutchings, Natalie
name: Wood, Wendy
name: Reading, Isabel
name: Walker, Erin
name: Blazeby, Jane
name: Hoff, William VanâT
name: Young, Bridget
name: Crawley, Esther
name: Eaton, Simon
name: Chorozoglou, Maria
name: Sherratt, Frances
name: Beasant, Lucy
name: Corbett, Harriet
name: Stanton, Michael
name: Grist, Simon
name: Dixon, Elizabeth
name: Hall, Nigel
Publisher: name: figshare
Year: 2018
Subjects: Developmental Biology

description: Parental consent form with optional patient assent. (DOC 136 kb)
First results of the QUENCH-20 test with BWR bundle
Creators: name: Stuckert, J.
name: Große, M.
name: Laier, J.
name: Moch, J.
name: Peters, U.
name: Stegmaier, U.
name: Steinbrück, M.
Publisher: name: Karlsruhe
Year: 2019
Subjects: severe accident
B4C absorber
eutectic interaction

description: Experiment QUENCH-20 with BWR geometry simulation bundle was successfully conducted at KIT on 9th October 2019. This test was performed in the framework of international access SAFEST infrastructure with the users from Swedish Radiation Safety Authority (SSM) in cooperation with Westinghouse Sweden, GRS and KTH. The test objective was the investigation of a BWR fuel assembly degradation including a B4C control blade. The test bundle mock-up represents one quarter of a BWR fuel assembly. The 24 electrically heated fuel rod simulators were filled separately with krypton (overpressure of 4 bar). According to the pre-test calculations performed with ATHLET-CD, the bundle was heated to a temperature of 1230 K at the cladding of the central rod at the hottest elevation of 950 mm. This pre-oxidation phase in steam lasted 4 hours. Towards the end of this phase, the reference rod was extracted from the test bundle for determination of the oxide thickness axial distribution. During the transient stage, the bundle was heated to a maximal temperature of 2000 K. The cladding failures were observed at temperature about 1700 K and lasted about 200 s. Massive absorber melt relocation was observed 50 s before the end of transition stage. The test was terminated with the quench water injected with a flow rate of 50 g/s from the bundle bottom. Fast temperature escalation from 2000 to 2300 K during 20 s was observed. The mass spectrometer measured release of COx and few CH4 during the reflood as products of absorber oxidation; corresponding production of B2O3 should be about 97 g. Hydrogen production during the reflood amounted to 32 g (57.4 g during the whole test) including 10 g from B4C oxidation.
Additional file 1: of BpWrapper: BioPerl-based sequence and tree utilities for rapid prototyping of bioinformatics pipelines
Creators: name: YĂśzen HernĂĄndez
name: Bernstein, Rocky
name: Pagan, Pedro
name: Levy Vargas
name: McCaig, William
name: Girish Ramrattan
name: Saymon Akther
name: Larracuente, Amanda
name: Di, Lia
name: Vieira, Filipe
name: Qiu, Wei-Gang
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Molecular Biology
subject: Pharmacology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Marine Biology
subject: 60506 Virology

description: A reference card for the four BpWrapper utilities (PDF 758Â kb)
title: Les jeux
title: The games of the past
titleType: AlternativeTitle
Creators: name: Moyse-Faurie, Claire
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2023
Subjects: subject: Haméa
subject: cir

description: Narration sur les anciens jeux
description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
Quantum information in the Posner model of quantum cognition
Creators: name: Halpern, Nicole Yunger
name: Crosson, Elizabeth
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Physics (quant-ph)
subject: Soft Condensed Matter (cond-mat.soft)
subject: Biological Physics (physics.bio-ph)
subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: Matthew Fisher recently postulated a mechanism by which quantum phenomena could influence cognition: Phosphorus nuclear spins may resist decoherence for long times, especially when in Posner molecules. The spins would serve as biological qubits. We imagine that Fisher postulates correctly. How adroitly could biological systems process quantum information (QI)? We establish a framework for answering. Additionally, we construct applications of biological qubits to quantum error correction, quantum communication, and quantum computation. First, we posit how the QI encoded by the spins transforms as Posner molecules form. The transformation points to a natural computational basis for qubits in Posner molecules. From the basis, we construct a quantum code that detects arbitrary single-qubit errors. Each molecule encodes one qutrit. Shifting from information storage to computation, we define the model of Posner quantum computation. To illustrate the model's quantum-communication ability, we show how it can teleport information incoherently: A state's weights are teleported. Dephasing results from the entangling operation's simulation of a coarse-grained Bell measurement. Whether Posner quantum computation is universal remains an open question. However, the model's operations can efficiently prepare a Posner state usable as a resource in universal measurement-based quantum computation. The state results from deforming the Affleck-Kennedy-Lieb-Tasaki (AKLT) state and is a projected entangled-pair state (PEPS). Finally, we show that entanglement can affect molecular-binding rates, boosting a binding probability from 33.6% to 100% in an example. This work opens the door for the QI-theoretic analysis of biological qubits and Posner molecules.
description: Published version
Additional file 7: of B-cell antibody class switchings are pressuromodulated events: Part II, gene recombination
Creators: name: Sarin, Hemant
Publisher: name: figshare
Year: 2018
Subjects: subject: Biophysics
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Evolutionary Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Hematology
subject: 110309 Infectious Diseases
subject: Computational Biology

description: Table S7. Chromosome 14 (−) strand chromatin Ig heavy chain locus variability gene esebssiwaagoTQs to final 2-digit (and 3-digit) esebssiwaagoTQ for germline genes in native 5′- > 3′ chronology1(a) Episodes beginning with an anisotropic (A) or mesotropic (M) SEB; 1(b) non-contributory anisotropic sub-episode block (NCA); 1(c) non-contributory single or multiple stabilizing isotropy points or reverse stabilizing isotropy point(s), NCstI; 1(d) anisotropy converted-to-mesotropy, ACM; and 1(e) indirect reverse stIsotropy and/or stIsotropy for anisotropy or for mesotropy, stMfA or stMfM. §lnc-AL901608.1–10/IGHV1–3/IGHV4–4 gene locus esebssiwaagoTQ is D_-_ -J_ location dependent. (DOC 46 kb)
25 years QUENCH program. Main results of the QUENCH bundle tests
Creators: name: Stuckert, J.
name: Große, M.
name: Steinbrück, M.
Publisher: name: Karlsruhe
Year: 2019
Subjects: severe accidents
design basis accidents

description: In the framework of the QUENCH program at KIT, over the past 22 years, 21 bundle tests were performed under severe accident conditions with different cladding materials. Additionally, 7 QUENCH-LOCA bundle tests with fresh and pre-hydrogenated different cladding materials (Zry-4, M5®, opt. ZIRLO™) were performed according to a temperature/time-scenario typical for a LBLOCA in a German PWR. Main purposes of severe accident tests were hydrogen source term, as well as investigation of phenomena on melt relocation, debris, and aerosol formation. Concerning the hydrogen source term, six parameters, enhancing hydrogen production during reflood, have been identified: 1) low reflood flow rates < 1 g/s/rod; 2) breakaway effect with weakness and spallation of protective oxide layer; 3) steam starvation; 4) nitride formation by air ingress with formation of very porous oxide layer during following reflood; 5) high temperatures with melt relocation outside claddings and intensive melt oxidation; 6) eutectic interactions between B4C, stainless steel and Zircaloy-4 leading to low melting point. Post-test tensile experiments performed in the framework of the QUENCH-LOCA program evidenced fracture at hydrogen bands (formed during secondary hydriding) for claddings with local hydrogen concentrations >1500 wppm.
title: Le chant sur le café
title: Song about coffee
titleType: AlternativeTitle
Creators: name: Moyse-Faurie, Claire
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2023
Subjects: subject: Haméa
subject: cir

description: La chanson sur le café
description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
Additional file 4 of Long noncoding RNA LINC00314 facilitates osteogenic differentiation of adipose-derived stem cells through the hsa-miR-129-5p/GRM5 axis via the Wnt signaling pathway
Creators: name: Shi, Zheng-liang
name: Zhang, Hua
name: Fan, Zhi-yong
name: Ma, Wei
name: Song, Yong-zhou
name: Li, Ming
name: Li, Tong-qiu
name: Cao, Shu-xing
name: Feng, Guo-jun
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 4: Supplementary Table S2. Differentially expressed miRNAs between induced and non-induced ADSCs. logFC: log fold change; AveExpr: average expression; adj. P.Val: adjustive P value.
Tracing the Spiral Structure of the Outer Milky Way with Dense Atomic Hydrogen Gas
Creators: name: Koo, Bon-Chul
name: Park, Geumsook
name: Kim, Woong-Tae
name: Lee, Myung Gyoon
name: Balser, Dana S.
name: Wenger, Trey V.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We present a new face-on map of dense neutral atomic hydrogen (HI) gas in the outer Galaxy. Our map has been produced from the Leiden/Argentine/Bonn (LAB) HI 21-cm line all-sky survey by finding intensity maxima along every line of sight and then by projecting them on the Galactic plane. The resulting face-on map strikingly reveals the complex spiral structure beyond the solar circle, which is characterized by a mixture of distinct long arcs of HI concentrations and numerous 'interarm' features. The comparison with more conventional spiral tracers confirms the nature of those long arc structures as spiral arms. Our map shows that the HI spiral structure in the outer Galaxy is well described by a four-arm spiral model (pitch angle of 12 deg) with some deviations, and gives a new insight into identifying HI features associated with individual arms.
description: 24 pages, 10 figures, 3 tables; accepted for publication in PASP
title: Anguille sacrée
title: Story of sacred eel
titleType: AlternativeTitle
Creators: name: Moyse-Faurie, Claire
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2023
Subjects: subject: Haméa
subject: cir

description: Histoire de l'anguille sacrée
description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
Effects of Biostimulants and Fertilization on Nutrient Uptake by Grass and Composition of Soil Pore Water Versus 0.01 M CaCl2 Soil Extracts
Creators: name: Regelink, Inge C.
name: Koopmans, Gerwin F.
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Plant Biology

description: Humic substances are increasingly used as biostimulants in agriculture because of their supposed effects on nutrient uptake and crop yield. The objective of this study was to assess the effect of fulvic acid (FA) and humic acid (HA) addition with and without fertilization (N, P, K, S, and Ca) on (i) grass yield (Poa trivialis) and nutrient uptake and (ii) composition of soil porewater and 0.01 M CaCl2 soil extracts. Therefore, a pot experiment was performed using a loamy soil and a non-calcareous sandy soil. Fertilization increased N and P uptake and grass yield but there was no effect of FA or HA application (200 mg C kg−1 soil) regardless of whether N or P was the growth limiting nutrient. Nutrient availability was assessed in soil pore water samples extracted by centrifugating moist soil and by 0.01 M CaCl2 extracts of oven-dried soil. HA and FA had no effect on the availability of NO3 or ortho-P, neither in soil porewater nor in 0.01 M CaCl2 soil extracts. Fertilization led to an increase in 0.01 M CaCl2-extractable ortho-P but, remarkably, to a decrease in ortho-P and Dissolved Organic Carbon (DOC) concentrations in soil pore water samples. This discrepancy was explained by the higher ionic strength of pore water in the fertilized soils, which caused the pH to drop by 0.2 to 0.4 units and thereby stimulated adsorption of ortho-P and DOC to reactive soil minerals. Such salt-induced effects do not occur in 0.01 M CaCl2 soil extracts where the ionic strength is nearly constant.
title: Le champs d'ignames
title: The fields of yams, culture and beginnings
titleType: AlternativeTitle
Creators: name: Moyse-Faurie, Claire
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2023
Subjects: subject: Haméa
subject: cir

description: Le champs d'ignames : Culture et prémices
description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
title: Histoire du caillou
title: Story of the rock
titleType: AlternativeTitle
Creators: name: Moyse-Faurie, Claire
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2023
Subjects: subject: Haméa
subject: cir

description: Narration de l'histoire du caillou
description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
Hydrodynamics of the interacting Bose gas in the Quantum Newton Cradle setup
Creators: name: Caux, Jean-Sébastien
name: Doyon, Benjamin
name: Dubail, Jérôme
name: Konik, Robert
name: Yoshimura, Takato
Publisher: name: arXiv
Year: 2017
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Quantum Gases (cond-mat.quant-gas)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: Describing and understanding the motion of quantum gases out of equilibrium is one of the most important modern challenges for theorists. In the groundbreaking Quantum Newton Cradle experiment [Kinoshita, Wenger and Weiss, Nature 440, 900, 2006], quasi-one-dimensional cold atom gases were observed with unprecedented accuracy, providing impetus for many developments on the effects of low dimensionality in out-of-equilibrium physics. But it is only recently that the theory of generalized hydrodynamics has provided the adequate tools for a numerically efficient description. Using it, we give a complete numerical study of the time evolution of an ultracold atomic gas in this setup, in an interacting parameter regime close to that of the original experiment. We evaluate the full evolving phase-space distribution of particles. We simulate oscillations due to the harmonic trap, the collision of clouds without thermalization, and observe a small elongation of the actual oscillation period and cloud deformations due to many-body dephasing. We also analyze the effects of weak anharmonicity. In the experiment, measurements are made after release from the one-dimensional trap. We evaluate the gas density curves after such a release, characterizing the actual time necessary for reaching the asymptotic state where the integrable quasi-particle momentum distribution function emerges.
description: v1: 7+10 pages, 3+7 figures. v2: references added, pictures with refined discretization. v3: addition of discussion of integrability breaking by trap + small improvements
title: Les langues (C)
title: I.06
titleType: AlternativeTitle
Creators: name: Ploog, Katja
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2011
Subjects: subject: Français
subject: fra
subject: Français (Abidjan)

description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
Incorporating the sample correlation into the testing of two endpoints in clinical trials
Creators: name: Sarkar, Sanat
name: Rom, Dror
name: McTague, Jaclyn
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy

description: We introduce an improved Bonferroni method for testing two primary endpoints in clinical trial settings using a new data-adaptive critical value that explicitly incorporates the sample correlation coefficient. Our methodology is developed for the usual Student’s t-test statistics for testing the means under normal distributional setting with unknown population correlation and variances. Specifically, we construct a confidence interval for the unknown population correlation and show that the estimated type-1 error rate of the Bonferroni method with the population correlation being estimated by its lower confidence limit can be bounded from above less conservatively than using the traditional Bonferroni upper bound. We also compare the new procedure with other procedures commonly used for the multiple testing problem addressed in this paper.
Additional file 3 of Long noncoding RNA LINC00314 facilitates osteogenic differentiation of adipose-derived stem cells through the hsa-miR-129-5p/GRM5 axis via the Wnt signaling pathway
Creators: name: Shi, Zheng-liang
name: Zhang, Hua
name: Fan, Zhi-yong
name: Ma, Wei
name: Song, Yong-zhou
name: Li, Ming
name: Li, Tong-qiu
name: Cao, Shu-xing
name: Feng, Guo-jun
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 3: Supplementary Table S1. Differentially expressed lncRNAs between induced and non-induced ADSCs. logFC: log fold change; AveExpr: average expression; adj. P.Val: adjustive P value.
Transient wave resistance upon a real shear current
Creators: name: Li, Yan
name: Smeltzer, Benjamin K.
name: Ellingsen, Simen Å.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences

description: We study the waves and wave-making forces acting on ships travelling on currents which vary as a function of depth. Our concern is realism; we consider a real current profile from the Columbia River, and model ships with dimensions and Froude numbers typical of three classes of vessels operating in these waters. To this end we employ the most general theory of waves from free-surface sources on shear current to date, which we derive and present here. Expressions are derived for ship waves which satisfy an arbitrary dispersion relation and are generated by a wave source acting on the free surface, with the source's shape and time-dependence is also being arbitrary. Practical calculation procedures for numerically calculating dispersion on a shear current which may vary arbitrarily with depth both in direction and magnitude, are indicated. For ships travelling at oblique angle to a shear-current, the ship wave pattern is asymmetrical, and wave-making radiation forces have a lateral component in addition to the conventional wave resistance, the sternward component. No corresponding lateral force exists in the absence of shear. We consider the dependence of wave resistance and lateral force for upstream, downstream and cross-stream motion on the Columbia River current, both in steady motion and during two different maneouvres: a ship suddenly set in motion, and a ship turning through 360 deg. We find that for smaller ships (tugboats, fishing-boats) the wave resistance can differ drastically from that in quiescent water, and depends strongly on Froude number and direction of motion. For Froude numbers typical of such boats, wave resistance can vary by a factor 3 between upstream and downstream motion, and the strong Froude number dependence is made more complicated by interference effects. The lateral radiation force ... [abstract truncated due to ArXiV's space restrictions]
description: 16 pages, 12 figures
Additional file 9: of Prevalence of loss-of-function alleles does not correlate with lifetime fecundity and other life-history traits in metazoans
Creators: name: Bezmenova, Aleksandra
name: Bazykin, Georgii
name: Kondrashov, Alexey
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Figure S4. The mean proportions of LoF alleles in the last 100 nucleotides of each gene against lifetime fecundity in all (green) and in hard-core (orange) genes for each species (Spearman’s correlation coefficients are − 0.19 and − 0.05, respectively; p-values are 0.28 and 0.76). (PDF 268 kb)
title: Le jour des petits (B)
Creators: name: Ploog, Katja
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2011
Subjects: subject: Français
subject: fra
subject: Français (Abidjan)

description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
title: Les "vrais" bakroman (B)
title: II.03
titleType: AlternativeTitle
Creators: name: Ploog, Katja
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2011
Subjects: subject: Français
subject: fra
subject: Français (Abidjan)

description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
Noncommutative boundaries and the ideal structure of reduced crossed products
Creators: name: Kennedy, Matthew
name: Schafhauser, Christopher
Publisher: name: arXiv
Year: 2017
Subjects: subject: Operator Algebras (math.OA)
subject: Dynamical Systems (math.DS)
subject: Functional Analysis (math.FA)
subject: FOS: Mathematics

description: A C*-dynamical system is said to have the ideal separation property if every ideal in the corresponding crossed product arises from an invariant ideal in the C*-algebra. In this paper we characterize this property for unital C*-dynamical systems over discrete groups. To every C*-dynamical system we associate a "twisted" partial C*-dynamical system that encodes much of the structure of the action. This system can often be "untwisted," for example when the algebra is commutative, or when the algebra is prime and a certain specific subgroup has vanishing Mackey obstruction. In this case, we obtain relatively simple necessary and sufficient conditions for the ideal separation property. A key idea is a notion of noncommutative boundary for a C*-dynamical system that generalizes Furstenberg's notion of topological boundary for a group.
description: 43 pages; revised
title: Le Béninois (B)
title: II.08
titleType: AlternativeTitle
Creators: name: Ploog, Katja
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2011
Subjects: subject: Français
subject: fra
subject: Français (Abidjan)

description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
CURRENT ANALGESIC AND SEDATION PRACTICES IN PREMATURE INFANTS RECEIVING INVASIVE VENTILATION: PROTOCOL FOR A SYSTEMATIC SCOPING REVIEW
Creators: name: Durrmeyer, Xavier
name: van den Bosch, Gerbrich
name: Cobo, Maria
name: Roué, Jean-Michel
name: Tauzin, Manon
name: Simons, Sinno
name: Baxter, Luke
name: Bhatt, Aomesh
name: Slater, Rebeccah
name: Olsson, Emma
name: Steinnes, Solfrid
Publisher: name: Open Science Framework
Year: 2022
Subjects: subject: Medicine and Health Sciences

description: This scoping review aims at assessing the risks and benefits of current sedatives and analgesics' use for invasive ventilation in premature infants
title: GFCI V (G)
title: III.05
titleType: AlternativeTitle
Creators: name: Ploog, Katja
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2011
Subjects: subject: Français
subject: fra
subject: Français (Abidjan)

description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
MOESM7 of Translation efficiency of heterologous proteins is significantly affected by the genetic context of RBS sequences in engineered cyanobacterium Synechocystis sp. PCC 6803
Creators: name: Thiel, Kati
name: Mulaku, Edita
name: Dandapani, Hariharan
name: Nagy, Csaba
name: Eva-Mari Aro
name: Kallio, Pauli
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified

description: Additional file 7. Expression levels predicted by UTR Designer for sYFP2 and GFPmut3b in combination with the 13 target RBS sequences used in the study.
Tuning and optimization for a variety of many-core architectures without changing a single line of implementation code using the Alpaka library
Creators: name: Matthes, Alexander
name: Widera, René
name: Zenker, Erik
name: Worpitz, Benjamin
name: Huebl, Axel
name: Bussmann, Michael
Publisher: name: arXiv
Year: 2017
Subjects: subject: Distributed, Parallel, and Cluster Computing (cs.DC)
subject: FOS: Computer and information sciences

description: We present an analysis on optimizing performance of a single C++11 source code using the Alpaka hardware abstraction library. For this we use the general matrix multiplication (GEMM) algorithm in order to show that compilers can optimize Alpaka code effectively when tuning key parameters of the algorithm. We do not intend to rival existing, highly optimized DGEMM versions, but merely choose this example to prove that Alpaka allows for platform-specific tuning with a single source code. In addition we analyze the optimization potential available with vendor-specific compilers when confronted with the heavily templated abstractions of Alpaka. We specifically test the code for bleeding edge architectures such as Nvidia's Tesla P100, Intel's Knights Landing (KNL) and Haswell architecture as well as IBM's Power8 system. On some of these we are able to reach almost 50\% of the peak floating point operation performance using the aforementioned means. When adding compiler-specific #pragmas we are able to reach 5 TFLOPS/s on a P100 and over 1 TFLOPS/s on a KNL system.
description: Accepted paper for the P\^{}3MA workshop at the ISC 2017 in Frankfurt
Little Ships of Dunkirk
Creators: name: Project Team, Their Finest Hour
Publisher: name: University of Oxford
Year: 2024
Subjects: classificationCode: 430304
subject: British history
classificationCode: 430308
subject: European history (excl. British, classical Greek and Roman)
classificationCode: 430316
subject: International history

description: My grandfather, John Adams, later a sub-Lieutenant in the Navy, had two Thames Cruisers which were requisitioned by the Admiralty to support the Dunkirk evacuation. John insisted on sailing one of them. He was an experienced sailor but became lost in the fog and never made it. John later worked with the US Army, we think on civil engineering projects. He was a qualified civil engineer and built housing projects before the war, including around the Robin Hood Roundabout at New Malden on the A3.
Study of $B_c$ decays into charmonia and $D$ mesons
Creators: name: Dubnicka, Stanislav
name: Dubnickova, Anna Z.
name: Issadykov, Aidos
name: Ivanov, Mikhail A.
name: Liptaj, Andrej
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: In the wake of recent measurements of the decays $B_c^+\to J/ψD^+_s$ and $B_c^+\to J/ψD^{\ast\,+}_s$ performed by the LHCb and ATLAS Collaborations, we recalculate their branching fractions in the framework of the covariant confined quark model. We compare the obtained results with available experimental data, our previous findings and numbers from other approaches.
description: 15 pages, 2 figures
Additional file 6: of B-cell antibody class switchings are pressuromodulated events: Part II, gene recombination
Creators: name: Sarin, Hemant
Publisher: name: figshare
Year: 2018
Subjects: subject: Biophysics
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Neuroscience
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Hematology
subject: Computational Biology

description: Table S6. Chromosome 14 (â ) strand chromatin Ig heavy chain locus diversity (D)-to-joining (J) recombination sequence esebssiwaagoTQs to final 2-digit (and 3-digit) esebssiwaagoTQ before VDJ for allele 2 (IGHD)1(a) Episodes beginning with an anisotropic (A) or mesotropic (M) SEB; 1(b) non-contributory anisotropic sub-episode block (NCA); 1(c) non-contributory single or multiple stabilizing isotropy points or reverse stabilizing isotropy point(s), NCstI;1(d) anisotropy converted-to-mesotropy, ACM; and 1(e) indirect reverse stIsotropy and/or stIsotropy for anisotropy or for mesotropy, stMfA or stMfM. (DOC 76 kb)
title: GFCI VIII (G)
title: III.08
titleType: AlternativeTitle
Creators: name: Ploog, Katja
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2011
Subjects: subject: Français
subject: fra
subject: Français (Abidjan)

description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
Déclaration de Kanata 2020
Creators: name: Participants Au Sommet ESDN
Publisher: name: Zenodo
Year: 2020
Subjects: infrastructure de recherche numérique
gestion des données de recherche
encadrement des services de données nationaux
ESDN

description: La Déclaration de Kanata traduit le consensus général du milieu de la gestion des données de recherche (GDR) concernant les priorités en la matière dans la stratégie sur l’infrastructure de recherche numérique (IRN) en train de voir le jour. Le document a été rédigé avant tout et surtout à l’intention des chercheurs canadiens, bien qu’elle s’adresse également à la Nouvelle organisation de l’IRN (NOIRN) ainsi qu’aux décideurs et aux autres membres du milieu de la recherche. Cette version est une révision majeure de la Déclaration de Kanata de 2019 issue des principales mises à jour effectuées après le Sommet ESDN de 2019. Elle intègre notamment les commentaires formulés par les groupes de réflexion du Sommet ESDN de 2020, les notes collectives conservées au sortir du Sommet et les remarques sur la teneur de la déclaration originale, glanées lors du sondage tenu entre février et avril 2020.
Additional file 1 of Flipped classroom combined with case-based learning is an effective teaching modality in nephrology clerkship
Creators: name: Yang, Fuye
name: Lin, Wanbing
name: Wang, Yan
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy

description: Supplementary Quiz
Luftwaffe Interrupts Marbles in Harrogate
Creators: name: Project Team, Their Finest Hour
Publisher: name: University of Oxford
Year: 2024
Subjects: classificationCode: 430304
subject: British history
classificationCode: 430308
subject: European history (excl. British, classical Greek and Roman)
classificationCode: 430316
subject: International history

description: When you held the WWII memories session I told the collector of my experience when a German plane dropped a bomb on the Majestic Hotel. It did not explode, but the pilot , who survived the war, was welcomed back to Harrogate as a guest of honour. Our daughter, Jane, is in Harrogate at the moment and sent the photo of the bomb. I was about 5 yrs old at the time . To me, the main disruption was the interference with my game of marbles in the street. I remember the plane and the outline of the pilot in the cockpit. It was Harrogate's only brush with the war.
Microscopic Origin of the Valley Hall Effect in Transition Metal Dichalcogenides Revealed by Wavelength Dependent Mapping
Creators: name: Ubrig, Nicolas
name: Jo, Sanghyun
name: Philippi, Marc
name: Costanzo, Davide
name: Berger, Helmuth
name: Kuzmenko, Alexey B.
name: Morpurgo, Alberto F.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: The band structure of many semiconducting monolayer transition metal dichalcogenides (TMDs) possesses two degenerate valleys, with equal and opposite Berry curvature. It has been predicted that, when illuminated with circularly polarized light, interband transitions generate an unbalanced non-equilibrium population of electrons and holes in these valleys, resulting in a finite Hall voltage at zero magnetic field when a current flows through the system. This is the so-called valley Hall effect that has recently been observed experimentally. Here, we show that this effect is mediated by photo-generated neutral excitons and charged trions, and not by inter-band transitions generating independent electrons and holes. We further demonstrate an experimental strategy, based on wavelength dependent spatial mapping of the Hall voltage, which allows the exciton and trion contributions to the valley Hall effect to be discriminated in the measurement. These results represent a significant step forward in our understanding of the microscopic origin of photo-induced valley Hall effect in semiconducting transition metal dichalcogenides, and demonstrate experimentally that composite quasi-particles, such as trions, can also possess a finite Berry curvature.
description: accepted for publication in Nano Letters
title: La balafre (B)
title: IV.09
titleType: AlternativeTitle
Creators: name: Ploog, Katja
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2011
Subjects: subject: Français
subject: fra
subject: Français (Abidjan)

description: Conforms to: doi:10.34847/cocoon.49aefa90-8c1f-3ba8-a099-0ebefc6a2aa7
Kanata Declaration 2020
Creators: name: Attendees Of The NDSF Summit
Publisher: name: Zenodo
Year: 2020
Subjects: subject: digital research infrastructure
subject: research data management
subject: https://codata.org/rdm-glossary/research-data-management/
subject: https://codata.org/rdm-glossary/data-management/
subject: https://codata.org/rdm-glossary/digital-infrastructure/

description: The Kanata Declaration reflects a broad consensus from the Research Data Management (RDM) community on priorities for the data management component of the emerging Digital Research Infrastructure (DRI) Strategy. The intended targets are first and foremost Canadian researchers, but also the New DRI Organization (NDRIO), as well as decision makers and participants in the broader research community. This is a major revision of the 2019 Kanata Declaration which emerged from the 2019 NDSF Summit. Key updates include the incorporation of feedback from the 2020 NDSF Summit Breakout sessions, collaborative notes kept during the Summit, and feedback on each of the original Declaration Statements that were solicited via a survey tool from February to April 2020.
Additional file 1 of Common variants in MAEA gene contributed the susceptibility to osteoporosis in Han Chinese postmenopausal women
Creators: name: Cai, Xuan
name: Dong, Jun
name: Lu, Teng
name: Zhi, Liqiang
name: He, Xijing
Publisher: name: figshare
Year: 2021
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Hematology

description: Additional file 1: Supplemental Tables S1. Genetic information of the 4 genotyped SNPs. Supplemental Figure S1. Linkage disequilibrium structure of the 4 genotyped SNPs. Values of D’ were indicated in each cell. LD block was indicated by black bold frame.
Additional file 7: of Bacterial microbiota of Aedes aegypti mosquito larvae is altered by intoxication with Bacillus thuringiensis israelensis
Creators: name: Tetreau, Guillaume
name: Grizard, Stéphanie
name: Chandrashekhar Patil
name: Florence-Hélène Tran
name: Van, Van Tran
name: Stalinski, Renaud
name: Laporte, Frédéric
name: Mavingui, Patrick
name: Després, Laurence
name: Moro, Claire Valiente
Publisher: name: figshare
Year: 2018
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Figure S4. Non-metric multi-dimensional scaling plots of the bacterial communities of larvae based on DGGE lane analysis. 3D stress of the NMDS was 0.14. The NMDS representation is based on a Bray-Curtis dissimilarity matrix. Correspondence of sample names is indicated in the legend of Fig. 2. (PDF 65 kb)