cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Aulacochthebius narentinus
Creators: name: PROKIN, Alexander A.
name: LITOVKIN, Stanislav V.
name: JÄCH, Manfred A.
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Hydraenidae
Aulacochthebius
Aulacochthebius narentinus

description: Aulacochthebius narentinus (Reitter, 1885)
(Figs 1 –2)
Recorded from Orenburg Oblast’ (ST) for the first time by Litovkin (2012b).
Russia (CT): 52°55'58.8''N, 49°38'55.5''E, Samara Oblast’, Bezenchuk District, near Chapaevsk, small lake in Chapaevka River flood-plane, 2–4 Jul 2013, leg. S. Litovkin, 10 ex. (7 ex. – SLC, 2 ex. – NMW, 1 ex. – ISC); same locality data, 10 Aug 2015, leg. S. Litovkin, 3 ex. (SLC).
This is the second record from Russia, and the first record from the central part of European Russia (CT).
description: Published as part of PROKIN, Alexander A., LITOVKIN, Stanislav V. & JÄCH, Manfred A., 2015, New records of Hydraenidae and Elmidae (Coleoptera) from Russia and adjacent countries, pp. 99-110 in Fragmenta Faunistica 58 (2) on page 100, DOI: 10.3161/00159301FF2015.58.2.099, http://zenodo.org/record/6251830
title: Machine learning coarse-grained potentials of protein thermodynamics
Creators: name: Majewski, Maciej
name: Pérez, Adrià
name: Thölke, Philipp
name: Doerr, Stefan
name: Charron, Nicholas
name: Giorgino, Toni
name: Husic, Brooke Elena
name: Clementi, Cecilia
name: Noe, Frank
name: De Fabritiis, Gianni
Publisher: name: Freie Universität Berlin
Year: 2023
Subjects: subject: Machine learning
subject: Molecular dynamics
subject: Molecular modelling
subject: Protein analysis
subject: Protein function predictions
classificationCode: 530
subject: Physik

description: A generalized understanding of protein dynamics is an unsolved scientific problem, the solution of which is critical to the interpretation of the structure-function relationships that govern essential biological processes. Here, we approach this problem by constructing coarse-grained molecular potentials based on artificial neural networks and grounded in statistical mechanics. For training, we build a unique dataset of unbiased all-atom molecular dynamics simulations of approximately 9 ms for twelve different proteins with multiple secondary structure arrangements. The coarse-grained models are capable of accelerating the dynamics by more than three orders of magnitude while preserving the thermodynamics of the systems. Coarse-grained simulations identify relevant structural states in the ensemble with comparable energetics to the all-atom systems. Furthermore, we show that a single coarse-grained potential can integrate all twelve proteins and can capture experimental structural features of mutated proteins. These results indicate that machine learning coarse-grained potentials could provide a feasible approach to simulate and understand protein dynamics.
Prostheceraeus giesbrechtii Lang 1884
Creators: name: Noreña, Carolina
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Platyhelminthes
Rhabditophora
Polycladida
Euryleptidae
Prostheceraeus
Prostheceraeus giesbrechtii

description: Prostheceraeus giesbrechtii Lang, 1884
(Fig. 11 B)
Type locality. Bay of Naples, Italy (Lang 1884).
Distribution. Vietnam (Dawydoff 1952); Canary Archipelago: La Gomera (De Vera et al. 2009) (Fig. 1, G2; Table 1 and 2).
Occurrence in the Canary Islands. Prostheceraeus giesbrechtii was observed at intertidal zone, during the year 2000.
Taxonomic remarks. Specimens from the Canary Islands show the characteristic colour pattern described by Lang (1884): longitudinal blue and white or cream bands, with a longitudinal yellow stripe in the midline.
description: Published as part of Noreña, Carolina, 2017, The Polycladida (Platyhelminthes) of the Canary Islands. New genus, species and records in Zootaxa 4312 (1), DOI: 10.11646/zootaxa.4312.1.2, http://zenodo.org/record/852062
Prostheceraeus roseus Lang 1884
Creators: name: Noreña, Carolina
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Platyhelminthes
Rhabditophora
Polycladida
Euryleptidae
Prostheceraeus
Prostheceraeus roseus

description: Prostheceraeus roseus Lang, 1884
(Fig. 11 C)
Type locality. Bay of Naples, Italy (Lang 1884).
Distribution. Ria de Arosa in Corrubedo, Galicia, Atlantic coast of Spain (Noreña et al. 2014); Canary Archipelago: Lanzarote (De Vera et al. 2009) (Fig. 1, L3; Table 1 and 2).
Occurrence in the Canary Islands. Prostheceraeus roseus was observed at depths of 28–30 metres, on 27/08/ 2009 and 10/04/2011.
Taxonomic remarks. Although some variability in the colour patter was registered the alternating pink and white longitudinal stripes agree with the description of P. roseus. Nevertheless, the exemplars from Lanzarote display dorsal colour stripes twice as wide as those described for the Mediterranean species.
description: Published as part of Noreña, Carolina, 2017, The Polycladida (Platyhelminthes) of the Canary Islands. New genus, species and records in Zootaxa 4312 (1), DOI: 10.11646/zootaxa.4312.1.2, http://zenodo.org/record/852062
Wiedemannia Zetterstedt
Creators: name: Kustov, Semen
name: Zherebilo, Danil
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Empididae
Wiedemannia

description: Genus Wiedemannia Zetterstedt
Wiedemannia Zetterstedt, 1833: 207. Nomen nudum.
Wiedemannia Zetterstedt, 1837: 32. Nomen nudum.
Wiedemannia Zetterstedt, 1838: 559. Type-species, Wiedemannia borealis Zetterstedt (des. Coquillett, 1903: 258) [= Heleodromia bistigma Curtis].
description: Published as part of Kustov, Semen & Zherebilo, Danil, 2015, New data on the genus Wiedemannia Zetterstedt (Diptera: Empididae) from the Caucasus with description of four new species, pp. 351-369 in Zootaxa 4032 (4) on page 354, DOI: 10.11646/zootaxa.4032.4.1, http://zenodo.org/record/243485
title: Effects of climate change on marine coastal ecosystems – A review to guide research and management
Creators: name: Trégarot, Ewan
name: D'Olivo, Juan P.
name: Botelho, Andrea Zita
name: Cabrito, Andrea
name: Cardoso, Gabriel O.
name: Casal, Gema
name: Cragg, Simon M.
name: Degia, A. Karima
name: Fredriksen, Stein
name: Heiss, Georg
Publisher: name: Freie Universität Berlin
Year: 2024
Subjects: subject: Marine and coastal ecosystems
subject: Climate change
subject: Local stressors
subject: Ecological thresholds
subject: Conservation
classificationCode: 570
subject: Biowissenschaften; Biologie

description: There is growing concern over climate models that project significant changes in the oceans, with consequences on marine biodiversity and human well-being. However, marine and coastal ecosystems respond differently to climate change-related stressors depending on the ecosystem, species composition and interactions, geomorphologic settings, and spatial distribution, but also on the presence of local stressors interacting cumulatively with climate change-related pressures. Our paper provides a comprehensive review of the current literature about the effects of climate-related pressures on marine and coastal ecosystems and how local stressors affect their resilience. Our work focuses on key marine and coastal ecosystems from three ecoregions: the Caribbean Sea (coral reefs, mangrove forests, seagrass beds), the Mediterranean Sea (the coral Cladocora caespitosa, maërl beds and seagrass beds) and the North-East Atlantic, which include kelp forests, maërl beds, salt marshes and seagrass beds. This review highlights the need for a more comprehensive, multi-species, and multi-stressors approach to predict better changes at the ecosystem and seascape levels of marine and coastal ecosystems. Nevertheless, there is enough evidence to argue that addressing locally key manageable stressors common to multiple ecosystems, such as nutrient enrichment, coastal development, hydrologic disturbances, anchoring or sedimentation, will reduce the identified adverse effects of climate change. This knowledge is critical for practical conservation actions and coastal and marine spatial management at the ecoregion scale and beyond.
Hydraena canakcioglui aydini Janssens, 196
Creators: name: PROKIN, Alexander A.
name: LITOVKIN, Stanislav V.
name: JÄCH, Manfred A.
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Hydraenidae
Hydraena
Hydraena canakcioglui

description: Hydraena (s.str.) canakcioglui aydini Janssens, 196
Russia (ST): Krasnodarsky Kray, Agura River, 50 m upstream of waterfalls, on stones with moss under water, 7 Mar 2006, leg. P. Petrov, 2 ex. (APC); the record for ST in Jäch, Skale (2015) is based on these specimens.
description: Published as part of PROKIN, Alexander A., LITOVKIN, Stanislav V. & JÄCH, Manfred A., 2015, New records of Hydraenidae and Elmidae (Coleoptera) from Russia and adjacent countries, pp. 99-110 in Fragmenta Faunistica 58 (2) on page 100, DOI: 10.3161/00159301FF2015.58.2.099, http://zenodo.org/record/6251830
New Worlds Old Worlds And Underworlds: Conflictg Culture And The First World War
Creators: name: Project Team, World War I Centenary
Publisher: name: University of Oxford
Year: 2024
Subjects: classificationCode: 430304
subject: British history
classificationCode: 430308
subject: European history (excl. British, classical Greek and Roman)
classificationCode: 430316
subject: International history

description: Article contributed to the 'World War I Centenary: Continuations and Beginnings' project.The 'World War I Centenary: Continuations and Beginnings' project ran with contributions from 2012 to 2020. It was an open-access online platform offering free-to-use materials under a Creative Commons Attribution Non-Commercial Sharealike Licence. The project aimed to represent future directions in teaching First World War Studies, challenge existing misconceptions about the conflict, and reappraise the War in its social, cultural, historical, and political contexts. Contributions came from leading academic and non-academic experts, as well as student ambassadors, and include scholarly articles, short talks, lectures, ebooks, innovative computer models, and interactive maps. Funded by the JISC WW1 Open Educational Resources Programme and supported by the JISC 'Statement of Intent', this resource was a collaboration between the University of Oxford teams behind the First World War Poetry Digital Archive, the Great War Archive, and various other educational initiatives. The project's interdisciplinary approach and diverse materials aimed to bring the events, people, and places of World War I into sharp relief for educational and research purposes.
Modeling time-delayed acoustic interactions of cavitation bubbles and bubble clusters
Creators: name: Coulombel, Pierre
name: Denner, Fabian
Publisher: name: arXiv
Year: 2024
Subjects: subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences

description: We propose a low-dimensional modeling approach to simulate the dynamics, acoustic emissions and interactions of cavitation bubbles, based on a quasi-acoustic assumption. This quasi-acoustic assumption accounts for the compressibility of the medium surrounding the bubble and its finite speed of sound, whereby the potential of the acoustic wave emitted by the bubble propagates along outgoing characteristics. With these ingredients, a consistent set of equations describing the radial bubble dynamics as well as the resulting acoustic emissions and bubble-bubble interactions is obtained, which is accurate to the first order of the Mach number. This model is tested by considering several representative test cases, including the resonance behavior of multiple interacting bubbles and the response of dense mono- and polydisperse bubble clusters to a change in ambient pressure. The results are shown to be in excellent agreement with results reported in the literature. The differences associated with the finite propagation speed of the acoustic waves are observed to be most pronounced for the pressure-driven bubble dynamics in dense bubble clusters and the onset of cavitation in response to a change in ambient pressure.
description: This article has been accepted for publication in Physics of Fluids
Not Quite The Ticket
Creators: name: Project Team, World War I Centenary
Publisher: name: University of Oxford
Year: 2024
Subjects: classificationCode: 430304
subject: British history
classificationCode: 430308
subject: European history (excl. British, classical Greek and Roman)
classificationCode: 430316
subject: International history

description: Article contributed to the 'World War I Centenary: Continuations and Beginnings' project.The 'World War I Centenary: Continuations and Beginnings' project ran with contributions from 2012 to 2020. It was an open-access online platform offering free-to-use materials under a Creative Commons Attribution Non-Commercial Sharealike Licence. The project aimed to represent future directions in teaching First World War Studies, challenge existing misconceptions about the conflict, and reappraise the War in its social, cultural, historical, and political contexts. Contributions came from leading academic and non-academic experts, as well as student ambassadors, and include scholarly articles, short talks, lectures, ebooks, innovative computer models, and interactive maps. Funded by the JISC WW1 Open Educational Resources Programme and supported by the JISC 'Statement of Intent', this resource was a collaboration between the University of Oxford teams behind the First World War Poetry Digital Archive, the Great War Archive, and various other educational initiatives. The project's interdisciplinary approach and diverse materials aimed to bring the events, people, and places of World War I into sharp relief for educational and research purposes.
Hydraena gracilis Germar 1824
Creators: name: PROKIN, Alexander A.
name: LITOVKIN, Stanislav V.
name: JÄCH, Manfred A.
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Hydraenidae
Hydraena
Hydraena gracilis

description: Hydraena (s.str.) gracilis Germar, 1824
Recently recorded from ST by Litovkin (2012a).
Russia (ST): Orenburg Oblast’, Orenburg Nature Reserve, NE of Kuskol’ Lakes, 3 May 2011, leg. P. Petrov, 1 ex. (APC).
ST should be added to the Catalogue of Palaearctic Coleoptera.
description: Published as part of PROKIN, Alexander A., LITOVKIN, Stanislav V. & JÄCH, Manfred A., 2015, New records of Hydraenidae and Elmidae (Coleoptera) from Russia and adjacent countries, pp. 99-110 in Fragmenta Faunistica 58 (2) on page 101, DOI: 10.3161/00159301FF2015.58.2.099, http://zenodo.org/record/6251830
Security Assurance Cases in the Medical Domain - Supplemental Material
Creators: name: Fransson, Max
name: Andersson, Adam
name: Mohamad, Mazen
name: Steghöfer, Jan-Philipp
Publisher: name: Zenodo
Year: 2024

description: This additional online material supplements the manuscript "Security Assurance Cases in the Medical Domain: A Case Study" considered for submission at SEAA2024. It contains the following information:

Security Assurance Cases – Example

Questionnaire for Maintainability Focus Group

Overview of Relevant Roles at the Case Company

Use Cases of CASCADE in the Medical Domain

Overlap of CASCADE with Existing Regulation

Example of a benchmark case created with CASCADE
Wiedemannia (Chamaedipsia) beckeri Mik
Creators: name: Kustov, Semen
name: Zherebilo, Danil
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Empididae
Wiedemannia
Wiedemannia beckeri

description: Wiedemannia (Chamaedipsia) beckeri (Mik)
(Fig. 1)
Chamaedipsia beckeri Mik, 1889: 71.
Material examined. RUSSIA: Krasnodarskiy Territory, Nature Reserve “Kamyshanova Polyana” (5), 24.vi.2013, S.Yu. Kustov (1 ♀); same data, 24.vi.2013, S. Kustov (1 ♂); same data, 3.v.2015, S.Yu. Kustov, D. Zherebilo (1 ♂, 1 ♀). GEORGIA: Khevsureti (48), 21.vii.2014, D. Zherebilo (1 ♂); Samtskhe-Javakheti (29), 20.iv.2014, D. Zherebilo (2 ♂ 2 ♀); Lechkhumi Ridge (41), 29.iv.2014, D. Zherebilo (1 ♂); env. Lahepa (23), 29.iv.2014, D. Zherebilo (1 ♂, 2 ♀); Mingrelia (28), 2.v.2014, D. Zherebilo (5 ♂, 3 ♀); ridge Ofitsari (32), 5.v.2014, D. Zherebilo (1 ♂); Shavsheti ridge (24), 4.iv.2015, A.V. Zherebilo (1 ♂, 1 ♀); env. Chinkadziebi (25), 6.iv.2015, A.V. Zherebilo (1 ♂); env. Zedakinchha (34), 9.iv.2015, A.V. Zherebilo (1 ♂, 1 ♀); env. Chkumi (36), 11.iv.2015, A.V. Zherebilo (1 ♀). ABKHAZIA: env. Sukhum (18), 27.vi.2013, D. Zherebilo (1 ♂); River Bzyb (11), 11.vii.2013, D. Zherebilo (3 ♂, 1 ♀); River Pshitsa (9), 11.vii.2013, D. Zherebilo (1 ♂).
Diagnosis. This species differs by acrostichals divergent around the prescutellar depression, 5 pairs of dorsocentrals with interspersed shorter setae, olive-brown scutum (postpronotal lobe and lower margin of notopleuron slightly lighter) with triangular patch of blue pruinescence on prescutellar depression, fore femur apically without strong anterior setae; clasping cercus unilobed, elongated, broader basally and narrowed to apex.
Distribution. PALAEARCTIC: Europe: Austria, Bosnia and Herzegovina, French mainland, Germany, Hungary, Italian mainland, Poland, Romania, Slovakia, Slovenia, Switzerland; Caucasus: Russia (Krasnodarskiy Territory), Abkhazia, Georgia.
Remarks. Joost (1981) first reported this species from the Caucasus, collected the stream Yusengi (Russia: Kabardino-Balkaria Republic). In the Catalogue of Palaearctic Diptera (Chvála & Wagner 1989), this species was mistakenly indicated only from the territory of Georgia. Therefore W. (Chamaedipsia) beckeri is noted from the territories of Georgia and Abkhazia for the first time. Wiedemannia beckeri is common from mountain rivers of the Caucasus from elevations between 360–2830 m a.s.l. and is active from April to July.
description: Published as part of Kustov, Semen & Zherebilo, Danil, 2015, New data on the genus Wiedemannia Zetterstedt (Diptera: Empididae) from the Caucasus with description of four new species, pp. 351-369 in Zootaxa 4032 (4) on page 354, DOI: 10.11646/zootaxa.4032.4.1, http://zenodo.org/record/243485
title: Biocide Susceptibility and Antimicrobial Resistance of Escherichia coli Isolated from Swine Feces, Pork Meat and Humans in Germany
Creators: name: Silva, David Attuy Vey Da
name: Dieckmann, Ralf
name: Makarewicz, Oliwia
name: Hartung, Anita
name: Bethe, Astrid
name: Grobbel, Mirjam
name: Belik, Vitaly
name: Pletz, Mathias W.
name: Al Dahouk, Sascha
name: Neuhaus, Szilvia
Publisher: name: Freie Universität Berlin
Year: 2023
Subjects: subject: antimicrobial resistance
subject: biocide susceptibility
subject: Escherichia coli
subject: one health
classificationCode: 579
subject: Mikroorganismen, Pilze, Algen
classificationCode: 616
subject: Krankheiten

description: Phenotypic susceptibility testing of Escherichia (E.) coli is an essential tool to gain a better understanding of the potential impact of biocide selection pressure on antimicrobial resistance. We, therefore, determined the biocide and antimicrobial susceptibility of 216 extended-spectrum β-lactamase-producing (ESBL) and 177 non-ESBL E. coli isolated from swine feces, pork meat, voluntary donors and inpatients and evaluated associations between their susceptibilities. Minimum inhibitory concentrations (MICs) and minimum bactericidal concentrations (MBCs) of benzalkonium chloride, chlorhexidine digluconate (CHG), chlorocresol (PCMC), glutaraldehyde (GDA), isopropanol (IPA), octenidine dihydrochloride and sodium hypochlorite (NaOCl) showed unimodal distributions, indicating the absence of bacterial adaptation to biocides due to the acquisition of resistance mechanisms. Although MIC95 and MBC95 did not vary more than one doubling dilution step between isolates of porcine and human origin, significant differences in MIC and/or MBC distributions were identified for GDA, CHG, IPA, PCMC and NaOCl. Comparing non-ESBL and ESBL E. coli, significantly different MIC and/or MBC distributions were found for PCMC, CHG and GDA. Antimicrobial susceptibility testing revealed the highest frequency of resistant E. coli in the subpopulation isolated from inpatients. We observed significant but weakly positive correlations between biocide MICs and/or MBCs and antimicrobial MICs. In summary, our data indicate a rather moderate effect of biocide use on the susceptibility of E. coli to biocides and antimicrobials.
title: Species interactions: next-level citizen science
Creators: name: Groom, Quentin
name: Pernat, Nadja
name: Adriaens, Tim
name: Groot, Maarten De
name: Jelaska, Sven D.
name: Marčiulynienė, Diana
name: Martinou, Angeliki F.
name: Skuhrovec, Jiří
name: Tricarico, Elena
name: Wit, Ernst C.
Publisher: name: Freie Universität Berlin
Year: 2021
Subjects: subject: data collection
subject: ecosystems
subject: human environment
subject: networks
subject: species interaction
classificationCode: 570
subject: Biowissenschaften; Biologie

description: We envisage a future research environment where digital data on species interactions are easily accessible and comprehensively cover all species, life stages and habitats. To achieve this goal, we need data from many sources, including the largely untapped potential of citizen science for mobilising and utilising existing information on species interactions. Traditionally volunteers contributing information on the occurrence of species have focused on single-species observations from within one target taxon. We make recommendations on how to improve the gathering of species interaction data through citizen science, which data should be collected and how it can be motivated. These recommendations include providing feedback in the form of network visualisations, leveraging a wide variety of other data sources and eliciting an emotional connection to the species in question. There are many uses for these data, but in the context of biological invasions, information on species interactions will increase understanding of the effects of invasive alien species on recipient communities and ecosystems. We believe that the inclusion of ecological networks as a concept within citizen science, not only for initiatives focussed on biological invasions but also across other ecological themes, will not only enrich scientific knowledge on species interactions but also deepen the experience and enjoyment of citizens themselves.
On the non-dissipative orbital evolution of a binary system comprising non-compact components with misaligned spin and orbital angular momenta
Creators: name: Lazovik, Y. A.
name: Ivanov, P. B.
name: Papaloizou, J. C. B.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: In this Paper we determine the non-dissipative tidal evolution of a close binary system with an arbitrary eccentricity in which the spin angular momenta of both components are misaligned with the orbital angular momentum. We focus on the situation where the orbital angular momentum dominates the spin angular momenta and so remains at small inclination to the conserved total angular momentum. Torques arising from rotational distortion and tidal distortion taking account of Coriolis forces are included. This extends the previous work of Ivanov & Papaloizou relaxing the limitation resulting from the assumption that one of the components is compact and has zero spin angular momentum. Unlike the above study, the evolution of spin-orbit inclination angles is driven by both types of torque. We develop a simple analytic theory describing the evolution of orbital angles and compare it with direct numerical simulations. We find that the tidal torque prevails near 'critical curves' in parameter space where the time-averaged apsidal precession rate is close to zero. In the limit of small spin, these curves exist only for systems that have at least one component with retrograde rotation. As in our previous work, we find solutions close to these curves for which the apsidal angle librates. As noted there, this could result in oscillation between prograde and retrograde states. We consider the application of our approach to systems with parameters similar to those of the misaligned binary DI Her.
description: 21 pages, 7 figures. Published in MNRAS
title: State, trait, and accumulated features of the Alzheimer's Disease Assessment Scale Cognitive Subscale (ADAS-Cog) in mild Alzheimer's disease
Creators: name: Cogo-Moreira, Hugo
name: Krance, Saffire
name: Wu, Che-Yuan L.
name: Lanctôt, Krista
name: Herrmann, Nathan E.
name: Black, Sandra J.
name: MacIntosh, Bradley S.
name: Rabin, Jennifer
name: Eid, Michael
name: Swardfager, Walter
Publisher: name: Freie Universität Berlin
Year: 2023
Subjects: subject: Alzheimer's Disease Assessment Scale Cognitive Subscale
subject: Alzheimer's disease
subject: cognition
subject: latent state–trait autoregressive model
subject: structural equation modelling
classificationCode: 616
subject: Krankheiten

description: Background The Alzheimer's Disease Assessment Scale Cognitive Subscale (ADAS-Cog) is used to assess decline in memory, language, and praxis in Alzheimer's disease (AD). Methods A latent state–trait model with autoregressive effects was used to determine how much of the ADAS-Cog item measurement was reliable, and of that, how much of the information was occasion specific (state) versus consistent (trait or accumulated from one visit to the next). Results Participants with mild AD (n = 341) were assessed four times over 24 months. Praxis items were generally unreliable as were some memory items. Language items were generally the most reliable, and this increased over time. Only two ADAS-Cog items showed reliability >0.70 at all four assessments, word recall (memory) and naming (language). Of the reliable information, language items exhibited greater consistency (63.4% to 88.2%) than occasion specificity, and of the consistent information, language items tended to reflect effects of AD progression that accumulated from one visit to the next (35.5% to 45.3%). In contrast, reliable information from praxis items tended to come from trait information. The reliable information in the memory items reflected more consistent than occasion-specific information, but they varied between items in the relative amounts of trait versus accumulated effects. Conclusions Although the ADAS-Cog was designed to track cognitive decline, most items were unreliable, and each item captured different amounts of information related to occasion-specific, trait, and accumulated effects of AD over time. These latent properties complicate the interpretation of trends seen in ordinary statistical analyses of trials and other clinical studies with repeated ADAS-Cog item measures.
ARCHIVE - Changing research incentives in practice: lessons from institutional experiments
Creators: name: CERN-NASA Working Group "Incentives for Open Scholarship"
Publisher: name: Zenodo
Year: 2024

description: Research institutions around the world are increasingly developing open science policies, strategies and action plans. Following this momentum, the 2021 UNESCO Recommendation on Open Science provides common ground in terms of the open science definition and key areas that institutions should consider when promoting it. Multiple initiatives recognize the key importance of institutionalizing incentives for recognizing and encouraging open scholarship practices.

International initiatives such as DORA and CoARA have been instrumental in gaining leadership support to make change happen at research institutions and universities worldwide. Considering this, after the 2023 CERN-NASA Summit “Accelerating the Adoption of Open Science” a group of participants highlighted there is a need for connecting broad principles with concrete strategies to change research incentives towards open scholarship.

This brief presents lessons learned and open questions from various initiatives aiming to change incentives for open scholarship in practice. It intends to add to the global discussion in this field, some of which is referenced at the end of this document. As with any other case studies, the intention is to inspire others working in this topic; learnings need to be contextualized before being taken as implementation guidelines.
Brethesiella Porter 1920
Creators: name: Zuparko, Robert L.
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Encyrtidae
Brethesiella

description: Brethesiella Porter 1920
Hosts. Hemiptera: Margarodidae
mojave V. Trjapitzin & S. Triapitsyn 2006: 7 Type. UCRC
Distribution. C (Los Angeles) Host/habitat. Steatococcus tabernicolus
description: Published as part of Zuparko, Robert L., 2015, Annotated Checklist of California Encyrtidae (Hymenoptera), pp. 1-126 in Zootaxa 4017 (1) on page 17, DOI: 10.11646/zootaxa.4017.1.1, http://zenodo.org/record/245475
title: Gold(I) and Silver(I) Complexes Containing Hybrid Sulfonamide/Thiourea Ligands as Potential Leishmanicidal Agents
Creators: name: Borges, Alice P.
name: Obata, Malu M. S.
name: Libardi, Silvia H.
name: Trevisan, Rafael O.
name: Deflon, Victor M.
name: Abram, Ulrich
name: Ferreira, Francis B.
name: Costa, Luiz Antônio S.
name: Patrocínio, Antonio O. T.
name: Silva, Marcos V. Da
name: Borges, Júlio C.
name: Maia, Pedro I. S.
Publisher: name: Freie Universität Berlin
Year: 2024
Subjects: subject: hybrid compounds
subject: thioureas
subject: sulfonamides
classificationCode: 540
subject: Chemie und zugeordnete Wissenschaften

description: Leishmaniasis is a group of parasitic diseases with the potential to infect more than 1 billion people; however, its treatment is still old and inadequate. In order to contribute to changing this view, this work consisted of the development of complexes derived from MI metal ions with thioureas, aiming to obtain potential leishmanicidal agents. The thiourea ligands (HLR) were obtained by reactions of p-toluenesulfohydrazide with R-isothiocyanates and were used in complexation reactions with AgI and AuI, leading to the formation of complexes of composition [M(HLR)2]X (M = Ag or Au; X = NO3− or Cl−). All compounds were characterized by FTIR, 1H NMR, UV-vis, emission spectroscopy and elemental analysis. Some representatives were additionally studied by ESI-MS and single-crystal XRD. Their properties were further analyzed by DFT calculations. Their cytotoxicity on Vero cells and the extracellular leishmanicidal activity on Leishmania infantum and Leishmania braziliensis cells were evaluated. Additionally, the interaction of the complexes with the Old Yellow enzyme of the L. braziliensis (LbOYE) was examined. The biological tests showed that some compounds present remarkable leishmanicidal activity, even higher than that of the standard drug Glucantime, with different selectivity for the two species of Leishmania. Finally, the interaction studies with LbOYE revealed that this enzyme could be one of their biological targets.
Caenohomalopoda Tachikawa 1979
Creators: name: Zuparko, Robert L.
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Encyrtidae
Caenohomalopoda

description: Caenohomalopoda Tachikawa 1979 [New state record]
Hosts. Hemiptera: Diaspididae
shikokuensis (Tachikawa 1956: 90) (Pseudhomalopoda) [New state record](USNM)
Type. EUMJ
Distribution. A (Orange) (USNM)
Host/habitat. Froggattiella penicillata
Remarks. Trjapitzin (1989) reported Odonaspis secreta as a host of this species in Korea,but it is unclear whether that host record is more properly ascribed to C. koreana Tachikawa, Paik & Paik 1981. This species is presumably native to eastern Asia, but has spread worldwide (it has been previously reported from Africa, the Caribbean and Florida) with the introduction of bamboo.
description: Published as part of Zuparko, Robert L., 2015, Annotated Checklist of California Encyrtidae (Hymenoptera), pp. 1-126 in Zootaxa 4017 (1) on page 17, DOI: 10.11646/zootaxa.4017.1.1, http://zenodo.org/record/245475
Rose Macaulay Hurt Berries And Compassion Fatigue
Creators: name: Project Team, World War I Centenary
Publisher: name: University of Oxford
Year: 2024
Subjects: classificationCode: 430304
subject: British history
classificationCode: 430308
subject: European history (excl. British, classical Greek and Roman)
classificationCode: 430316
subject: International history

description: Article contributed to the 'World War I Centenary: Continuations and Beginnings' project.The 'World War I Centenary: Continuations and Beginnings' project ran with contributions from 2012 to 2020. It was an open-access online platform offering free-to-use materials under a Creative Commons Attribution Non-Commercial Sharealike Licence. The project aimed to represent future directions in teaching First World War Studies, challenge existing misconceptions about the conflict, and reappraise the War in its social, cultural, historical, and political contexts. Contributions came from leading academic and non-academic experts, as well as student ambassadors, and include scholarly articles, short talks, lectures, ebooks, innovative computer models, and interactive maps. Funded by the JISC WW1 Open Educational Resources Programme and supported by the JISC 'Statement of Intent', this resource was a collaboration between the University of Oxford teams behind the First World War Poetry Digital Archive, the Great War Archive, and various other educational initiatives. The project's interdisciplinary approach and diverse materials aimed to bring the events, people, and places of World War I into sharp relief for educational and research purposes.
Wiedemannia (Wiedemannia) braueri Mik
Creators: name: Kustov, Semen
name: Zherebilo, Danil
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Empididae
Wiedemannia
Wiedemannia braueri

description: Wiedemannia (Wiedemannia) braueri (Mik)
(Fig. 2)
Clinocera braueri Mik, 1880: 352.
Material examined. RUSSIA: Krasnodarskiy Territory, env. Guamka (3), 21.v.2015, D. Zherebilo (1 ♂, 5 ♀). GEORGIA: Mingrelia, Env. Doberazeni (28), 2.v.2014, D. Zherebilo (1 ♂).
Diagnosis. Wiedemannia braueri differs by a wide gena (more than 1/2 of eye height) acrostichals divergent around the prescutellar depression, 5–6 pairs of dorsocentrals with interspersed shorter setae, olive-brown scutum with slightly bluish prescutellar depression, postpronotal lobe and lower margin of notopleuron lighter, fore femur without strong anterior setae apically; pterostigma rounded, very large and distinct; clasping cercus divided with anterior and posterior lobes long and digitiform, clothed in long setae; mid lobe broad and short, rather mittenshaped.
Distribution. PALAEARCTIC: Europe: Austria, Bosnia and Herzegovina, Czech Republic, Germany, Hungary, Italian mainland, Poland, Slovakia, Slovenia, Ukraine; Caucasus: Russia (Krasnodarskiy Territory), Georgia.
Remarks. Joost (1981) first reported this species from the Caucasus, collected from the Sochi River (Russia, Krasnodarskiy Territory). In the Catalogue of Palaearctic Diptera (Chvála & Wagner 1989), this species was mistakenly noted only from the territory of Georgia. Therefore W. braueri is noted from the territory of Georgia for the first time. The uncommonly collected species is known from foothill rivers from elevations between 0–450 m a.s.l. and is active in May to June.
description: Published as part of Kustov, Semen & Zherebilo, Danil, 2015, New data on the genus Wiedemannia Zetterstedt (Diptera: Empididae) from the Caucasus with description of four new species, pp. 351-369 in Zootaxa 4032 (4) on pages 354-356, DOI: 10.11646/zootaxa.4032.4.1, http://zenodo.org/record/243485
Additional file 6 of Optimising (re-)irradiation for locally recurrent head and neck cancer: impact of dose-escalation, salvage surgery, PEG tube and biomarkers on oncological outcomes—a single centre analysis
Creators: name: Schleifenbaum, Julia Katharina
name: Morgenthaler, Janis
name: Sharma, Shachi Jenny
name: Klußmann, Jens Peter
name: Linde, Philipp
name: Wegen, Simone
name: Rosenbrock, Johannes
name: Baues, Christian
name: Fokas, Emmanouil
name: Khor, Richard
name: Ng, Sweet Ping
name: Marnitz, Simone
name: Trommer, Maike
Publisher: name: figshare
Year: 2025
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Cancer
subject: Science Policy
subject: Hematology

description: Supplementary Material
ARCHIVE - Science funders: commitments towards open infrastructure
Creators: name: CERN-NASA Working Group "Infrastructure for Open Scholarship"
Publisher: name: Zenodo
Year: 2024

description: After the 2023 CERN-NASA Summit “Accelerating the Adoption of Open Science”, a group of participants highlighted the need for science funders to consider infrastructure as a key prerequisite of open science policies. The experts understand that current lack of support for the mechanisms for sharing data, articles, code, and designs is undermining effective adoption of open science. 

The goal of these principles is to provide high-level orientation to science funders, including national councils, universities, and research institutes, so open infrastructure has the support it needs for sustainable open science strategies. The document consists of a core set of principles plus a desirable list of recommendations for those already addressing infrastructure in open science.

These recommendations for funders are accompanied by a set of principles for open infrastructure projects that complements the first set and aims to increase the quality of service provided to researchers and institutions. The group aims to emphasize that the principles for infrastructure initiatives do not have a prescriptive approach; instead the goal should be to foster good practices in the field. 

This work intends  to add and build on the corpus of work that has been undertaken globally in this area, some of which is referenced at the end of this document. As any global framework, it will need to be regionally situated to ensure feasibility, efficacy and sustainability in a diversity of contexts.
Cerapterocerus Westwood 1833
Creators: name: Zuparko, Robert L.
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Encyrtidae
Cerapterocerus

description: Cerapterocerus Westwood 1833 [New state record]
spp.
Remarks. One described species (C. phragmitis Gordh & Trjapitzin 1981) and three undescribed species of this genus have been reported from the Nearctic region (Noyes et al. 1997). There are fully winged and brachypterous specimens, representing what appear to be two undescribed species, from Alpine, Inyo, Lassen, Mono, Modoc, Santa Clara, Stanislaus and Tuolumne counties (CSCA, RLZC, UCDC, UCFC, UCRC).
description: Published as part of Zuparko, Robert L., 2015, Annotated Checklist of California Encyrtidae (Hymenoptera), pp. 1-126 in Zootaxa 4017 (1) on page 17, DOI: 10.11646/zootaxa.4017.1.1, http://zenodo.org/record/245475
Hydraena pulchella Germar 1824
Creators: name: PROKIN, Alexander A.
name: LITOVKIN, Stanislav V.
name: JÄCH, Manfred A.
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Hydraenidae
Hydraena
Hydraena pulchella

description: Hydraena (s.str.) pulchella Germar, 1824
Russia (ST): Belgorod Oblast’, Olshanka River, near bridge, 7 Jun 2011, leg. A. Silina, 1 ex. (APC); (CT): Yaroslavl Oblast’, Nekouzsky District, near Borok, Latka River, 15 Aug 2004, leg. N. Zhgareva, 1 ex., Ild’ River, 29 Jul 2010, leg. N. Zhgareva, 1 ex., 29 Aug 2010, leg. N. Zhgareva, 1 ex. (APC) (Prokin et al., 2013); Samara Oblast’, Elkhovka District, near Proleyka, stream, 53°55'59"N, 50°14'30"E, 25 Jul 2005, leg. S. Litovkin, 1 ex. (SLC).
ST should be added to the Catalogue of Palaearctic Coleoptera.
description: Published as part of PROKIN, Alexander A., LITOVKIN, Stanislav V. & JÄCH, Manfred A., 2015, New records of Hydraenidae and Elmidae (Coleoptera) from Russia and adjacent countries, pp. 99-110 in Fragmenta Faunistica 58 (2) on page 101, DOI: 10.3161/00159301FF2015.58.2.099, http://zenodo.org/record/6251830
Samuel Pepys Junior
Creators: name: Project Team, World War I Centenary
Publisher: name: University of Oxford
Year: 2024
Subjects: classificationCode: 430304
subject: British history
classificationCode: 430308
subject: European history (excl. British, classical Greek and Roman)
classificationCode: 430316
subject: International history

description: Article contributed to the 'World War I Centenary: Continuations and Beginnings' project.The 'World War I Centenary: Continuations and Beginnings' project ran with contributions from 2012 to 2020. It was an open-access online platform offering free-to-use materials under a Creative Commons Attribution Non-Commercial Sharealike Licence. The project aimed to represent future directions in teaching First World War Studies, challenge existing misconceptions about the conflict, and reappraise the War in its social, cultural, historical, and political contexts. Contributions came from leading academic and non-academic experts, as well as student ambassadors, and include scholarly articles, short talks, lectures, ebooks, innovative computer models, and interactive maps. Funded by the JISC WW1 Open Educational Resources Programme and supported by the JISC 'Statement of Intent', this resource was a collaboration between the University of Oxford teams behind the First World War Poetry Digital Archive, the Great War Archive, and various other educational initiatives. The project's interdisciplinary approach and diverse materials aimed to bring the events, people, and places of World War I into sharp relief for educational and research purposes.
Anonymus virilis Lang 1884
Creators: name: Noreña, Carolina
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Platyhelminthes
Rhabditophora
Polycladida
Anonymidae
Anonymus
Anonymus virilis

description: Anonymus virilis Lang, 1884
(Fig. 11 E)
Type locality. Bay of Naples, Italy (Lang 1884).
Distribution. Puerto Grande de San Vicente, Cape Verde (Laidlaw 1906); Canary Archipelago: Tenerife (De Vera et al. 2009) (Fig. 1, T10; Table 1 and 2).
Occurrence in the Canary Islands. The organism was observed at depths of 4 metres, on 02/07/2003.
Taxonomic remarks. The translucent appearance in which multiple male copulatory organs can be distinguished, the intestinal ramifications are marked orange or reddish, the cerebral eyes are grouped in a characteristic single elongated cluster, and the marginal eyes distributed along the first third of the body, agrees with the description made by Lang in 1884 form A. virilis.
description: Published as part of Noreña, Carolina, 2017, The Polycladida (Platyhelminthes) of the Canary Islands. New genus, species and records in Zootaxa 4312 (1), DOI: 10.11646/zootaxa.4312.1.2, http://zenodo.org/record/852062
Wiedemannia (Wiedemannia) caucasica Joost
Creators: name: Kustov, Semen
name: Zherebilo, Danil
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Empididae
Wiedemannia
Wiedemannia caucasica

description: Wiedemannia (Wiedemannia) caucasica Joost
(Fig. 3)
Wiedemannia caucasica Joost, 1981: 186.
Material examined. RUSSIA: Adygea Republic, Caucasian State Nature Biosphere Reserve (4), 25.vii.2013, S. Kustov (1 ♂). Krasnodarskiy Territory, River Malaya Laba (10), 24.v.2014, D. Zherebilo (3 ♂, 5 ♀); northern slope of Rocky Ridge (22), 24.v.2014, D. Zherebilo (3 ♂, 5 ♀). Karachay-Cherkess Republic, env. Phiya (15), 11.viii.2013, D. Zherebilo (5 ♂, 15 ♀); same data, V. Gladun (3 ♂, 7 ♀). GEORGIA: Lechkhumi ridge (41), 29.iv.2014, D. Zherebilo (14 ♂, 21 ♀); env. Lahepa (23), 29.iv.2014, D. Zherebilo (4 ♂, 4 ♀); Mingrelia (28), 2.v.2014, D. Zherebilo (3 ♂, 1 ♀); same data, 6.v.2014, D. Zherebilo (3 ♂, 5 ♀); ridge Ofitsari (30), 828 m a.s.l., 4.v.2014, D. Zherebilo (5 ♂, 9 ♀); same data, 6.v.2014, D. Zherebilo (1 ♂); env. Zedakinchha (34), 9.iv.2015, A.V. Zherebilo (2 ♂, 1 ♀); env. Opitara (35), 10.iv.2015, A.V. Zherebilo (1 ♂); env. Chkumi (36), 11.iv.2015, A.V. Zherebilo (2 ♂, 3 ♀); env. Namohvani (37), 15.iv.2015, A.V. Zherebilo (4 ♂); env. Mukhuri (42), 17.iv.2015, A.V. Zherebilo (6 ♂, 9 ♀); env. Norio (46), 18.iv.2015, A.V. Zherebilo (1 ♂); Lechkhumi ridge (41), 19.iv.2015, A.V. Zherebilo (6 ♂, 9 ♀); env. Orhvi (39), 20.iv.2015, A.V. Zherebilo (5 ♂). ABKHAZIA: River Bzyb (11), 11.vii.2013, D. Zherebilo (1 ♀).
Diagnosis. Wiedemannia (s.str.) caucasica differs by the gena equal to eye height, acrostichals divergent around the prescutellar depression, 5 pairs of dorsocentrals with interspersed shorter setae, olive-brown scutum with blue pruinescence on prescutellar depression, fore femur without strong anterior setae apically; pterostigma indistinct and elongate; clasping cercus unilobed, extending to tip of phallus, broader at base, without basal process.
Distribution. Caucasus: Russia (Adygea Republic, Krasnodarskiy Territory, Karachay-Cherkess Republic), Abkhazia, Georgia.
Remarks. Joost (1981) described this species from the Sochi River (Russia, Krasnodarskiy Territory), but in the Catalogue of Palaearctic Diptera (Chvála & Wagner 1989) the species was mistakenly indicated from the territory of Georgia. Therefore W. caucasica is noted from the territories of Georgia and Abkhazia for the first time. This commonly collected species is known from submontane and mountain rivers from altitude 0–1700 m a.s.l. and active from April to August.
description: Published as part of Kustov, Semen & Zherebilo, Danil, 2015, New data on the genus Wiedemannia Zetterstedt (Diptera: Empididae) from the Caucasus with description of four new species, pp. 351-369 in Zootaxa 4032 (4) on page 356, DOI: 10.11646/zootaxa.4032.4.1, http://zenodo.org/record/243485
title: Constraining the reflective properties of WASP-178 b using CHEOPS photometry
Creators: name: Pagano, I.
name: Scandariato, G.
name: Singh, V.
name: Lendl, M.
name: Queloz, D.
name: Csizmadia, Szilárd
name: Erikson, A.
name: Lam, Kristine Wai Fun
name: Rauer, Heike
name: Smith, Alexis M. S.
Publisher: name: Freie Universität Berlin
Year: 2024
Subjects: subject: planets and satellites: individual: wasp-178 b
subject: techniques: photometric
subject: planets and satellites: detection
subject: planets and satellites: gaseous planets
subject: planets and satellites: atmospheres
classificationCode: 520
subject: Astronomie und zugeordnete Wissenschaften

description: Context. Multiwavelength photometry of the secondary eclipses of extrasolar planets is able to disentangle the reflected and thermally emitted light radiated from the planetary dayside. Based on this, we can measure the planetary geometric albedo Ag, which is an indicator of the presence of clouds in the atmosphere, and the recirculation efficiency ϵ, which quantifies the energy transport within the atmosphere. Aims. We measure Ag and ϵ for the planet WASP-178 b, a highly irradiated giant planet with an estimated equilibrium temperature of 2450 K. Methods. We analyzed archival spectra and the light curves collected by CHEOPS and TESS to characterize the host WASP-178, refine the ephemeris of the system, and measure the eclipse depth in the passbands of the two telescopes. Results. We measured a marginally significant eclipse depth of 70 ± 40 ppm in the TESS passband, and a statistically significant depth of 70 ± 20 ppm in the CHEOPS passband. Conclusions. Combining the eclipse-depth measurement in the CHEOPS (λeff = 6300 Å) and TESS (λeff = 8000 Å) passbands, we constrained the dayside brightness temperature of WASP-178 b in the 2250–2800 K interval. The geometric albedo 0.1< Ag<0.35 generally supports the picture that giant planets are poorly reflective, while the recirculation efficiency ϵ >0.7 makes WASP-178 b an interesting laboratory for testing the current heat-recirculation models.