cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
MOESM2 of Effects of a naturally occurring amino acid substitution in bovine PrP: a model for inherited prion disease in a natural host species
Creators: name: Vrentas, Catherine
name: Greenlee, Justin
name: Foster, Gregory
name: West, James
name: Jahnke, Marianna
name: Schmidt, Mark
name: Nicholson, Eric
Publisher: name: figshare
Year: 2017
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified

description: Additional file 2. Additional Statistical Analysis. Additional description of statistical tests completed on the data, potential statistical limitations and their implications, and prospective statistical power analyses for assessment of effects of the 200K mutation.
Host cell transcriptomic response to the multidrug-resistant Mycobacterium tuberculosis clonal outbreak Beijing strain reveals its pathogenic features
Creators: name: Prombutara, Pinidphon
name: Siregar, Tegar Adriansyah Putra
name: Laopanupong, Thanida
name: Kanjanasirirat, Phongthon
name: Khumpanied, Tanawadee
name: Borwornpinyo, Suparerk
name: Rai, Awantika
name: Chaiprasert, Angkana
name: Palittapongarnpim, Prasit
name: Ponpuak, Marisa
Publisher: name: Taylor & Francis
Year: 2022
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology
subject: Computational Biology

description: The upsurge of multidrug-resistant infections has rendered tuberculosis the principal cause of death among infectious diseases. A clonal outbreak multidrug-resistant triggering strain of Mycobacterium tuberculosis was identified in Kanchanaburi Province, labelled “MKR superspreader,” which was found to subsequently spread to other regions, as revealed by prior epidemiological reports in Thailand. Herein, we showed that the MKR displayed a higher growth rate upon infection into host macrophages in comparison with the H37Rv reference strain. To further elucidate MKR’s biology, we utilized RNA-Seq and differential gene expression analyses to identify host factors involved in the intracellular viability of the MKR. A set of host genes function in the cellular response to lipid pathway was found to be uniquely up-regulated in host macrophages infected with the MKR, but not those infected with H37Rv. Within this set of genes, the IL-36 cytokines which regulate host cell cholesterol metabolism and resistance against mycobacteria attracted our interest, as our previous study revealed that the MKR elevated genes associated with cholesterol breakdown during its growth inside host macrophages. Indeed, when comparing macrophages infected with the MKR to H37Rv-infected cells, our RNA-Seq data showed that the expression ratio of IL-36RN, the negative regulator of the IL-36 pathway, to that of IL-36G was greater in macrophages infected with the MKR. Furthermore, the MKR’s intracellular survival and increased intracellular cholesterol level in the MKR-infected macrophages were diminished with decreased IL-36RN expression. Overall, our results indicated that IL-36RN could serve as a new target against this emerging multidrug-resistant M. tuberculosis strain.
УСТРОЙСТВО ДЛЯ ВРАЩЕНИЯ ОБРАЗЦА ПРИ НИЗКИХ ТЕМПЕРАТУРАХ В СИЛЬНОМ МАГНИТНОМ ПОЛЕ
Creators: name: Яфарова А. Ф.
name: Холин Д. И.
name: Сосин С. С.
Publisher: name: 39-е Совещание по физике низких температур (Международная конференция), посвященное 300-летию Российской академии наук
Year: 2024
Subjects: Физика низких температур

description: В данной работе описано компактное устройство, расположенное внутри криостата непосредственно рядом с образцом в сильном магнитном поле.
An investigative study into the Advanced Certificate in Nursing (Enrolled Nurse) Course
Creators: name: Alexander, Frances J
Publisher: name: Macquarie University
Year: 2022
Subjects: Other education not elsewhere classified

description: The New South Wales Advanced Certificate in Nursing (Enrolled Nurse) Course was implemented in October 1991. The Advanced Certificate is a twelve-month course, which commences in the Technical And Further Education (TAFE) environment with a seven-week block of theory concerning essential care. This is followed by approximately six months in the hospital clinical areas. Students then re-enter the TAFE learning environment for another seven-week theory block consisting of specialty nursing care before returning to the hospital specialty care areas. -- Anecdotal reports suggested that both Registered Nurses and Enrolled Nurses were experiencing frustration in the hospital clinical environment. Investigation of these reports would provide valuable information to inform educational and workplace practices. -- A major longitudinal research project was implemented in 1992 to investigate the perceptions of Enrolled Nurses, TAFE teachers of Enrolled Nurses and Registered Nurses who work with Enrolled Nurses in the hospital clinical environments in relation to the newly implemented Advanced Certificate of Nursing (Enrolled Nurse) course. -- This current study is embedded within a larger strategy. This study is an investigative study into the New South Wales Advanced Certificate in Nursing (Enrolled Nurse) course. The study investigates both the TAFE theoretical and the hospital clinical components of the course. -- The investigation was carried out by surveying over 140 Registered Nurses statewide. This research effort presents the second questionnaire that relates to the student's specialty hospital clinical care experience. The survey questions examine four broad areas. -Information relating to the execution of the Enrolled Nurse program. -Information relating to learner performance after the block of theoretical instruction. -Information relating to workplace experience. -Information relating to professional issues. -- The response to the survey indicated that the majority of Registered Nurses felt that the Enrolled Nurses were adequately prepared for the workplace experience. Some Registered Nurses provided examples of where they perceived deficits in knowledge or skills. These deficits generally fell into two broad areas. One area was situations where theory may not adequately prepare students eg. Crisis situations such as trauma, aggression or death. The second area of deficit suggested by Registered Nurses were skills that are considered inconsistent with the educational preparation for the role and function of Enrolled Nurses. The findings of this research have implications for the hospital workplace, educational institutions and the body of nursing professionals. -- The perplexity over what Enrolled Nurses should and shouldn't do intensifies the confusion surrounding the role and function of the Enrolled Nurse. Some of the questions that arose from the research are addressed in the recommendations.
Study of the excited $1^-$ charm and charm-strange mesons
Creators: name: Li, Qiang
name: Jiang, Yue
name: Wang, Tianhong
name: Yuan, Han
name: Wang, Guo-Li
name: Chang, Chao-Hsi
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: We give a systematical study on the recently reported excited charm and charm-strange mesons with potential $1^-$ spin-parity, including the $D^*_{s1}(2700)^+$, $D^*_{s1}(2860)^+$, $D^*(2600)^0$, $D^*(2650)^0$, $D^*_1(2680)^0$ and $D^*_1(2760)^0$. The main strong decay properties are obtained by the framework of Bethe-Salpeter (BS) methods. Our results reveal that the two $1^-$ charm-strange mesons can be well described by the further $2^3\!S_1$-$1^3\!D_1$ mixing scheme with a mixing angle of $8.7^{+3.9}_{-3.2}$ degrees. The predicted decay ratio $\frac{\mathcal{B}(D^*K)}{\mathcal{B}(D~K)}$ for $D^*_{s1}(2860)$ is $0.62^{+0.22}_{-0.12}$.~$D^*(2600)^0$ can also be explained as the $2^3\!S_1$ predominant state with a mixing angle of $-(7.5^{+4.0}_{-3.3})$ degrees. Considering the mass range, $D^*(2650)^0$ and $D^*_1(2680)^0$ are more likely to be the $2^3\!S_1$ predominant states, although the total widths under both the $2^3\!S_1$ and $1^3\!D_1$ assignments have no great conflict with the current experimental data. The calculated width for LHCb $D^*_1(2760)^0$ seems about 100 \si{MeV} larger than experimental measurement if taking it as $1^3\!D_1$ or $1^3\!D_1$ dominant state $c\bar u$. The comparisons with other calculations and several important decay ratios are also present. For the identification of these $1^-$ charm mesons, further experimental information, such as $\frac{\mathcal{B}(Dπ)}{\mathcal{B}(D^*π)}$ are necessary.
description: 18 pages, 3 figures
MOESM2 of Feasibility of sustained response through long-term dosing in food allergy immunotherapy
Creators: name: Andorf, Sandra
name: Monali Manohar
name: Dominguez, Tina
name: Block, Whitney
name: Tupa, Dana
name: Rohun Kshirsagar
name: Vanitha Sampath
name: R. Chinthrajah
name: Nadeau, Kari
Publisher: name: figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: 60506 Virology

description: Additional file 2: Table S1. Summary of allergic reactions as adverse events in LTFU study.
ФАЗОВЫЕ ДИАГРАММЫ АНТИФЕРРОМАГНЕТИКА DyB12 С ЯНТЕЛЛЕРОВСКОЙ СТРУКТУРНОЙ НЕУСТОЙЧИВОСТЬЮ И ЭЛЕКТРОННЫМ ФАЗОВЫМ РАССЛОЕНИЕМ
Creators: name: Азаревич А. Н.
name: Богач А. В.
name: Красиков К. М.
name: Хорошилов А. Л.
name: Шицевалова Н. Ю.
name: Случанко Н. Е.
Publisher: name: 39-е Совещание по физике низких температур (Международная конференция), посвященное 300-летию Российской академии наук
Year: 2024
Subjects: Физика низких температур

description: В работе в результате анализа, основанного на прецизионных низкотемпературных измерениях магнетосопротивления и намагниченности (M) в магнитном поле H≤80 кЭ впервые построены магнитные фазовые Н-Т и Н-φ диаграммы DyB12.
The development relationship between circular economy and advanced digital technology: based on an innovative literature review method
Creators: name: Du, Yang
name: Xu, Jun
name: Yuan, Xiao
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: The circular economy (CE) plays a crucial role in meeting the goals of sustainable development and dual-carbon targets. Nowadays, the integration of digital technology (DT) has emerged as a new driving force for enhancing the CE. This study employs an innovative literature review method that combines bibliometric analysis with systematic literature review from an interdisciplinary perspective. After defining the concepts of circular economy and advanced digital technology (ADT), we analyze their interactive development relationship using the principle of 'exploration to focus.' Our study findings are as follows: (1) The relationship between ADT and CE is intricate and intimate, and the volume of international research in this field is expected to peak soon. (2) The interaction between ADT and CE is closely associated with various aspects, including supply chain management, waste management, logistics, and business models. Cluster analysis reveals distinct preferences for different types of ADTs. (3) The interactive relationship between ADT and CE extends across macro to micro levels, encompassing economic, environmental, social, and technical dimensions. Currently, ADT primarily influences CE at the microeconomic level. Finally in paper, our study presents a theoretical analysis framework of the CE-ADT system, based on the results from both types of analysis.
Additional file 1 of Sequelae, persistent symptomatology and outcomes after COVID-19 hospitalization: the ANCOHVID multicentre 6-month follow-up study
Creators: name: Romero-Duarte, Álvaro
name: Rivera-Izquierdo, Mario
name: Guerrero-Fernández de Alba, Inmaculada
name: Pérez-Contreras, Marina
name: Fernández-Martínez, Nicolás Francisco
name: Ruiz-Montero, Rafael
name: Serrano-Ortiz, Álvaro
name: González-Serna, Rocío Ortiz
name: Salcedo-Leal, Inmaculada
name: Jiménez-Mejías, Eladio
name: Cárdenas-Cruz, Antonio
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 1: STROBE checklist. Checklist of items included in reports of observational studies.
ФЕРРОМАГНЕТИЗМ КРЕМНИЯ С ВОДОРОДОПОДОБНЫМИ ПРИМЕСЯМИ В ОБЛАСТИ ФАЗОВОГО ПЕРЕХОДА ИЗОЛЯТОР-МЕТАЛЛ
Creators: name: Забродский А.Г.
name: Вейнгер А.И.
name: Семенихин П.В.
name: Абросимов Н.В.
Publisher: name: 39-е Совещание по физике низких температур (Международная конференция), посвященное 300-летию Российской академии наук
Year: 2024
Subjects: Физика низких температур

description: Обнаружены и исследованы низкотемпературные ферромагнитные (ФМ) свойства немагнитного полупроводника – Si:P в области фазового перехода изолятор – металл (ИМ).
Where is the wise man?: Graeco-Roman education as a background to the divisions in 1 Corinthians 1-4
Creators: name: White, Adam Graham
Publisher: name: Macquarie University
Year: 2022
Subjects: Other education not elsewhere classified

description: This thesis investigates the divisions in the Corinthian church that Paul names in 1 Corinthians 1:12: “Each of you says, 'I follow Paul,' or 'I follow Apollos,' or 'I follow Cephas,' or 'I follow Christ.'” The investigation seeks to locate them in the milieu of first century Graeco-Roman education. By consulting relevant literary and epigraphic evidence, I will develop a picture of ancient education both throughout the Empire generally and in Roman Corinth specifically. This will serve as a backdrop to the situation in the Christian community, wherein some of the elite, educated members have preferred Apollos to Paul as a teacher since Apollos more closely resembles other teachers of higher studies. As we will see in the literature review, there have been numerous studies that have pursued this line of argument, each attempting to locate the problems in a specific school or branch of study. However, this thesis will argue that it is against the values inculcated through “higher education” in general that the teachers are being compared. By starting with this broader category, one that much better reflects the very eclectic nature of Graeco-Roman education, a sustained reading of the entire section of 1 Corinthians 1-4 is made possible.
ФОТОГАЛЬВАНИЧЕСКИЕ ЯВЛЕНИЯ И ЭФФЕКТ УВЛЕЧЕНИЯ В СВЕРХПРОВОДЯЩИХ КОНДЕНСАТАХ
Creators: name: Мельников А.С.
Publisher: name: 39-е Совещание по физике низких температур (Международная конференция), посвященное 300-летию Российской академии наук
Year: 2024
Subjects: Физика низких температур

description: Дан обзор некоторых особенностей фотогальванических эффектов и эффекта увлечения куперовских пар фотонами в сверхпроводящих системах в сравнении с нормальными (несверхпроводящими) металлами.
Dynamic Transition in Symbiotic Evolution Induced by Growth Rate Variation
Creators: name: Yukalov, V. I.
name: Yukalova, E. P.
name: Sornette, D.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Populations and Evolution (q-bio.PE)
subject: Biological Physics (physics.bio-ph)
subject: FOS: Biological sciences
subject: FOS: Physical sciences

description: In a standard bifurcation of a dynamical system, the stationary points (or more generally attractors) change qualitatively when varying a control parameter. Here we describe a novel unusual effect, when the change of a parameter, e.g. a growth rate, does not influence the stationary states, but nevertheless leads to a qualitative change of dynamics. For instance, such a dynamic transition can be between the convergence to a stationary state and a strong increase without stationary states, or between the convergence to one stationary state and that to a different state. This effect is illustrated for a dynamical system describing two symbiotic populations, one of which exhibits a growth rate larger than the other one. We show that, although the stationary states of the dynamical system do not depend on the growth rates, the latter influence the boundary of the basins of attraction. This change of the basins of attraction explains this unusual effect of the quantitative change of dynamics by growth rate variation.
description: Latex file, 16 pages, 17 figures
Additional file 2 of Sequelae, persistent symptomatology and outcomes after COVID-19 hospitalization: the ANCOHVID multicentre 6-month follow-up study
Creators: name: Romero-Duarte, Álvaro
name: Rivera-Izquierdo, Mario
name: Guerrero-Fernández de Alba, Inmaculada
name: Pérez-Contreras, Marina
name: Fernández-Martínez, Nicolás Francisco
name: Ruiz-Montero, Rafael
name: Serrano-Ortiz, Álvaro
name: González-Serna, Rocío Ortiz
name: Salcedo-Leal, Inmaculada
name: Jiménez-Mejías, Eladio
name: Cárdenas-Cruz, Antonio
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 2: Tables S1 to S5 (detailed information on secondary statistical results and data collection). Table S1. Sequelae or persistent symptoms (SPS) during 6 months after discharge: description and definitions of the information collected. Table S2. Sequelae or persistent symptoms (SPS) during 6 months after discharge associated to follow-up outcomes: return to emergency care, hospital readmission and post-discharge death. Table S3. Factors associated with the return to Emergency Services during the 6 months after discharge for COVID-19 hospitalization (n=160). Crude and adjusted logistic regression models. Table S4. Factors associated with hospital readmission during the 6 months after discharge for COVID-19 first hospitalization (n=35). Crude and adjusted logistic regression models. Table S5. Factors associated with mortality during the 6 months after discharge for COVID-19 hospitalization (n=8). Crude and adjusted logistic regression models.
MOESM1 of De novo transcriptome assembly: a new laccase multigene family from the marine-derived basidiomycete Peniophora sp. CBMAI 1063
Creators: name: Otero, Igor
name: Milene Ferro
name: Bacci, Maurício
name: Ferreira, Henrique
name: Sette, Lara
Publisher: name: figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Additional file 1. Table S1. Specific primers designed for Comp15071_c0_seq5 with tails to bind amplification products in the cloning vector. Figure S1. Species distribution of all homologous unigenes. Figure S2. Gene ontology (GO) classification of assembled unigenes (Level 2). GO terms were distributed into three ontologies: molecular functions—blue bars; biological process—red bars; and cellular component—green bars.
ЧИСЛЕННОЕ МОДЕЛИРОВАНИЕ СВЕРХПРОВОДЯЩИХ ИНТЕРФЕРОМЕТРОВ
Creators: name: Шуравин Н.С.
name: Карелина Л.Н.
name: Тарасова И.Е.
name: Ионин А.С.
name: Разорёнов Ф.А.
name: Больгинов В.В.
Publisher: name: 39-е Совещание по физике низких температур (Международная конференция), посвященное 300-летию Российской академии наук
Year: 2024
Subjects: Физика низких температур

description: В данной работе сравниваются результаты экспериментального исследования двухконтактных интерферометров различных конфигураций и моделирование их дизайнов в программе wxLL.
Competition between Chaotic and Non-Chaotic Phases in a Quadratically Coupled Sachdev-Ye-Kitaev Model
Creators: name: Chen, Xin
name: Fan, Ruihua
name: Chen, Yiming
name: Zhai, Hui
name: Zhang, Pengfei
Publisher: name: arXiv
Year: 2017
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The Sachdev-Ye-Kitaev (SYK) model is a concrete solvable model to study non-Fermi liquid properties, holographic duality and maximally chaotic behavior. In this work, we consider a generalization of the SYK model that contains two SYK models with different number of Majorana modes coupled by quadratic terms. This model is also solvable, and the solution shows a zero-temperature quantum phase transition between two non-Fermi liquid chaotic phases. This phase transition is driven by tuning the ratio of two mode numbers, and a Fermi liquid non-chaotic phase sits at the critical point with equal mode number. At finite temperature, the Fermi liquid phase expands to a finite regime. More intriguingly, a different non-Fermi liquid phase emerges at finite temperature. We characterize the phase diagram in term of the spectral function, the Lyapunov exponent and the entropy. Our results illustrate a concrete example of quantum phase transition and critical regime between two non-Fermi liquid phases.
description: 5 pages, 3 figures
Additional file 3: of Evolutionary history of the NAM-B1 gene in wild and domesticated tetraploid wheat
Creators: name: Lundström, Maria
name: Leino, Matti
name: Hagenblad, Jenny
Publisher: name: figshare
Year: 2017
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Sociology
subject: FOS: Sociology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Plant Biology

description: Neighbor-joining trees of wheat sequences in fragments surrounding NAM-B1 and reference genes. (A) Reference gene 11B. (B) Reference gene Gsp1B. (C) Reference gene MdhA. (D) Reference gene Mp7A. (E) Fragment t_10kb. (F) Fragment c_7kb. (G) Fragment c_174kb. (H) Fragment c_Yr36 + 3. (I) Fragment c_Yr36 + 52. (PDF 410 kb)
Negative definite functions for C*-dynamical systems
Creators: name: Bedos, Erik
name: Conti, Roberto
Publisher: name: arXiv
Year: 2016
Subjects: subject: Operator Algebras (math.OA)
subject: Dynamical Systems (math.DS)
subject: Functional Analysis (math.FA)
subject: Group Theory (math.GR)
subject: FOS: Mathematics

description: Given an action $α$ of a discrete group $G$ on a unital C*-algebra $A$, we introduce a natural concept of $α$-negative definiteness for functions from $G$ to $A$, and examine some of the first consequences of such a notion. In particular, we prove analogs of theorems due to Delorme-Guichardet and Schoenberg in the classical case where $A$ is trivial. We also give a characterization of the Haagerup property for the action $α$ when $G$ is countable.
ФОТОТОКИ, ИНДУЦИРОВАННЫЕ СТРУКТУРИРОВАННЫМ СВЕТОМ
Creators: name: Тарасенко С.А.
Publisher: name: 39-е Совещание по физике низких температур (Международная конференция), посвященное 300-летию Российской академии наук
Year: 2024
Subjects: Физика низких температур

description: В работе представлены результаты теоретического исследования отклика двумерных электронных систем на структурированное излучение.
ЭВОЛЮЦИЯ ВИХРЕЙ НА СВОБОДНОЙ ПОВЕРХНОСТИ СЛОЯ НОРМАЛЬНОГО ГЕЛИЯ He-I
Creators: name: Левченко А.А.
name: Межов-Деглин Л.П.
name: Пельменёв А.А.
Publisher: name: 39-е Совещание по физике низких температур (Международная конференция), посвященное 300-летию Российской академии наук
Year: 2024
Subjects: Физика низких температур

description: Возникновение термогравитационного конвективного течения в объеме слоя нормального жидкого гелия He-I глубиной h ≈ 1÷3 см в широкой цилиндрической ячейке, который подогревают сверху в поле силы тяжести в интервале температур Tλ ≤ Т ≤Тm , сопровождается возбуждением вихревого течения на свободной поверхности жидкости.
Additional file 1: of The effect of Danshen extract on lipoprotein-associated phospholipase A2 levels in patients with stable angina pectoris: study protocol for a randomized controlled trial - the DOLPHIN study
Creators: name: A-Di Chen
name: Wang, Chun-Ling
name: Qin, Yang
name: Tian, Liang
name: Chen, Li-Bin
name: Yuan, Xiao-Ming
name: Lin-Xiu Ma
name: Wang, Yu-Feng
name: Ji-Rong Sun
name: Hao-Sen Wang
name: Dai, Neng
Publisher: name: figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: SPIRIT 2013 checklist: The red text indicates on which page the corresponding content appears. P indicates page; NA indicates not available. (DOC 118 kb)
Fairleigh Dickinson University's PublicMind Poll: New Jersey July 2014
Creators: name: Fairleigh Dickinson University's PublicMind
Publisher: name: Roper Center for Public Opinion Research
Year: 2020

description: Registered to vote (1); President Barack Obama job approval (1); country moving in right direction/wrong track (1); Governor Chris Christie (1); New Jersey right direction/wrong track (1); Common Core State Standards Initiative (8); who should take leadership in making educational policy (1); punish/reward teachers based on how their students do on standardized tests (2); assisted suicide in New Jersey (3); cash payments for municipal employees with unused sick or vacation upon retirement (1); September 2013 controversy over and investigation into lane closures on George Washington Bridge (4); expand casino gambling outside Atlantic City (3); casino visit in past 12 months (1); own or rent (1); public employee pension system membership (1); news sources in past week (1).
Extraintestinal pathogenic Escherichia coli utilizes the surface-expressed elongation factor Tu to bind and acquire iron from holo-transferrin
Creators: name: Sun, Yu
name: Wang, Xuhang
name: Li, Jin
name: Xue, Feng
name: Tang, Fang
name: Dai, Jianjun
Publisher: name: Taylor & Francis
Year: 2022
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Hematology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Extraintestinal pathogenic Escherichia coli (ExPEC) is a common anthropozoonotic pathogen that causes systemic infections. To establish infection, ExPEC must utilize essential nutrients including iron from the host. Transferrin is an important iron source for multiple bacteria. However, the mechanism by which ExPEC utilizes transferrin remains unclear. In this study, we found that iron-saturated holo-transferrin rather than iron-free apo-transferrin promoted the vitality of ExPEC in heat-inactivated human serum. The multifunctional protein Elongation factor Tu (EFTu) worked as a holo-transferrin binding protein. EFTu not only bound holo-transferrin rather than apo-transferrin but also released transferrin-related iron, with all domains of EFTu involved in holo-transferrin binding and iron release events. We also identified the surface location of EFTu on ExPEC. Overexpression of EFTu on the surface of nonpathogenic E. coli not only promoted the binding of bacteria to holo-transferrin but also facilitated the uptake of transferrin-related iron. More importantly, it significantly enhanced the survival of E. coli in heat-inactivated human serum, which was positively correlated with holo-transferrin but not apo-transferrin. Our research revealed a novel function of EFTu in binding holo-transferrin to promote iron uptake by bacteria, suggesting that EFTu was a potential virulence factor of ExPEC. In addition, our study provided research avenues into the iron acquisition and pathogenicity mechanisms of ExPEC.
Achievable Rate Region of the Zero-Forcing Precoder in a 2 X 2 MU-MISO Broadcast VLC Channel with Per-LED Peak Power Constraint and Dimming Control
Creators: name: Agarwal, Amit
name: Mohammed, Saif Khan
Publisher: name: arXiv
Year: 2017
Subjects: subject: Information Theory (cs.IT)
subject: FOS: Computer and information sciences

description: In this paper, we consider the 2 X 2 multi-user multiple-input-single-output (MU-MISO) broadcast visible light communication (VLC) channel with two light emitting diodes (LEDs) at the transmitter and a single photo diode (PD) at each of the two users. We propose an achievable rate region of the Zero-Forcing (ZF) precoder in this 2 X 2 MU-MISO VLC channel under a per-LED peak and average power constraint, where the average optical power emitted from each LED is fixed for constant lighting, but is controllable (referred to as dimming control in IEEE 802.15.7 standard on VLC). We analytically characterize the proposed rate region boundary and show that it is Pareto-optimal. Further analysis reveals that the largest rate region is achieved when the fixed per-LED average optical power is half of the allowed per-LED peak optical power. We also propose a novel transceiver architecture where the channel encoder and dimming control are separated which greatly simplifies the complexity of the transceiver. A case study of an indoor VLC channel with the proposed transceiver reveals that the achievable information rates are sensitive to the placement of the LEDs and the PDs. An interesting observation is that for a given placement of LEDs in a 5 m X 5 m X 3 m room, even with a substantial displacement of the users from their optimum placement, reduction in the achievable rates is not significant. This observation could therefore be used to define "coverage zones" within a room where the reduction in the information rates to the two users is within an acceptable tolerance limit.
description: Submitted to IEEE Journal of Lightwave Technology
Open Data: Alpha-band oscillations enable spatially and temporally resolved tracking of covert spatial attention
Creators: name: Foster, Joshua
name: Sutterer, David
name: Serences, John
name: Vogel, Edward
name: Awh, Ed
Publisher: name: Open Science Framework
Year: 2022
Subjects: subject: alpha
subject: EEG
subject: inverted encoding model
subject: oscillations
subject: spatial attention

description: Foster, J.J., Sutterer, D.W., Serences, J.T., Vogel, E.K., & Awh, E. (In Press). Alpha-band oscillations enable spatially and temporally resolved tracking of covert spatial attention. Psychological Science.
Effects of elevated atmospheric carbon dioxide concentration and nutrient enrichment on freshwater plant species
Creators: name: Gufu, Guyo Duba
Publisher: name: Macquarie University
Year: 2022
Subjects: Other education not elsewhere classified

description: Despite being extremely species-rich and highly threatened, freshwater ecosystems have not attracted as much conservation and research efforts as terrestrial or marine ecosystems, specifically in relation to global environmental change. Therefore, the overarching aim of this thesis was to examine the effects of rising atmospheric CO2 concentration ([CO2]) and altered nutrient conditions on a select number of invasive exotic freshwater plant species relative to their native and naturalised counterparts in Australia. Firstly, a systematic description to establish the current status of exotic freshwater plant species with reproducing wild populations in Australia was conducted. It was found that there are 63 exotic freshwater species with wild populations including nationally invasive species and species that are invasive in some states (declared weeds). Europe, South America and North America were the main sources of these species and the most important introduction pathway was the ornamental plant trade. The systematic description was then followed by experiments testing the growth, reproduction, functional trait and competitive responses of a range of species with contrasting invasive status to elevated [CO2] and varied nutrient conditions. In most cases, the results showed that elevated [CO2] and nutrient enrichment promoted plant growth either independently or in interaction with each other, and did not mediate competition between the tested species. Furthermore, the growth effects were species-specific and not strongly linked to the invasive status of the species. It can therefore be concluded that exotic freshwater plant species are an important component of Australian freshwater systems and their response to global environmental change is largely species-specific. In addition, based on the number of species that showed increased growth under nutrient enrichment, it is likely that it will have a more profound direct effect on the freshwater systems than elevated [CO2].
Multiple HA substitutions in highly pathogenic avian influenza H5Nx viruses contributed to the change in the NA subtype preference
Creators: name: Antigua, Khristine Joy C.
name: Baek, Yun Hee
name: Choi, Won-Suk
name: Jeong, Ju Hwan
name: Kim, Eun-Ha
name: Oh, Sol
name: Yoon, Sun-Woo
name: Kim, Changil
name: Kim, Eung-Gook
name: Choi, So-Young
name: Hong, Seung Kon
name: Choi, Young Ki
name: Song, Min Suk
Publisher: name: Taylor & Francis
Year: 2022
Subjects: subject: Medicine
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Hematology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Virology

description: Novel highly pathogenic avian influenza (HPAI) H5Nx viruses are predominantly circulating worldwide, with an increasing potential threat of an outbreak in humans. It remains largely unknown how the stably maintained HPAI H5N1 suddenly altered its neuraminidase (NA) to other NA subtypes, which resulted in the emergence and evolution of H5Nx viruses. Here, we found that a combination of four specific amino acid (AA) substitutions (S123P-T156A-D183N- S223 R) in the hemagglutinin (HA) protein consistently observed in the H5Nx markedly altered the NA preference of H5N1 viruses. These molecular changes in H5N1 impaired its fitness, particularly viral growth and the functional activities of the HA and NA proteins. Among the AA substitutions identified, the T156A substitution, which contributed to the NA shift, also dramatically altered the antigenicity of H5N1 viruses, suggesting an occurrence of antigenic drift triggered by selective pressure. Our study shows the importance of how HA and NA complement each other and that antigenic drift in HA can potentially cause a shift in the NA protein in influenza A virus evolution.
MOESM1 of Effects of a naturally occurring amino acid substitution in bovine PrP: a model for inherited prion disease in a natural host species
Creators: name: Vrentas, Catherine
name: Greenlee, Justin
name: Foster, Gregory
name: West, James
name: Jahnke, Marianna
name: Schmidt, Mark
name: Nicholson, Eric
Publisher: name: figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 1. Additional methods. More detailed information about methodologies used to generate data in Fig.Â 1, Fig.Â 2, and TableÂ 1, including primers, qRT-PCR amplification conditions, and cycling information, as well as information about cell assays and recombinant prion protein purification.
Six-vertex model and non-linear differential equations I. Spectral problem
Creators: name: Galleas, W.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Mathematical Physics (math-ph)
subject: Exactly Solvable and Integrable Systems (nlin.SI)
subject: FOS: Physical sciences

description: In this work we relate the spectral problem of the toroidal six-vertex model's transfer matrix with the theory of integrable non-linear differential equations. More precisely, we establish an analogy between the Classical Inverse Scattering Method and previously proposed functional equations originating from the Yang-Baxter algebra. The latter equations are then regarded as an Auxiliary Linear Problem allowing us to show that the six-vertex model's spectrum solves Riccati-type non-linear differential equations. Generating functions of conserved quantities are expressed in terms of determinants and we also discuss a relation between our Riccati equations and a stationary Schrödinger equation.
description: 42 pages, 3 figures
ЭКСИТОНЫ В НИЗКОРАЗМЕРНЫХ СИСТЕМАХ
Creators: name: Глазов М. М.
Publisher: name: 39-е Совещание по физике низких температур (Международная конференция), посвященное 300-летию Российской академии наук
Year: 2024
Subjects: Физика низких температур

description: Доклад посвящен экситонным эффекта в структурах пониженной размерности. Основное внимание будет уделено экстремально-двумерным системам на основе дихалькогенидов переходных металлов.
Odd-frequency superconductivity in Sr$_2$RuO$_4$ measured by Kerr rotation
Creators: name: Komendová, L.
name: Black-Schaffer, A. M.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We establish the existence of bulk odd-frequency superconductivity in Sr$_2$RuO$_4$ and show that an intrinsic Kerr effect is a direct evidence of this state. We use both general two- and three-orbital models, as well as a realistic tight-binding description of Sr$_2$RuO$_4$ to demonstrate that odd-frequency pairing arises due to finite hybridization between different orbitals in the normal state, and is further enhanced by finite inter-orbital pairing.
ЭКСПЕРИМЕНТАЛЬНЫЕ ИССЛЕДОВАНИЯ ДВИЖЕНИЯ ГРАНИЦЫ РАЗДЕЛА ФАЗ СВЕРХТЕКУЧИЙ ГЕЛИЙ – ПАР В U-ОБРАЗНОМ КАНАЛЕ С МОНОДИСПЕРСНОЙ ЗАСЫПКОЙ
Creators: name: Пузина Ю.Ю.
name: Крюков А.П.
Publisher: name: 39-е Совещание по физике низких температур (Международная конференция), посвященное 300-летию Российской академии наук
Year: 2024
Subjects: Физика низких температур

description: В работе представлены экспериментальные данные по движению и стационарным параметрам межфазной поверхности гелий-II – пар в стесненных условиях при воздействии высокоинтенсивного теплового потока.
MITHRA 1.0: A full-wave simulation tool for Free Electron Lasers
Creators: name: Fallahi, Arya
name: Yahaghi, Alireza
name: Kärtner, Franz X.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Computational Physics (physics.comp-ph)
subject: Accelerator Physics (physics.acc-ph)
subject: FOS: Physical sciences

description: Free Electron Lasers (FELs) are a solution for providing intense, coherent and bright radiation in the hard X-ray regime. Due to the low wall-plug efficiency of FEL facilities, it is crucial and additionally very useful to develop complete and accurate simulation tools for better optimizing a FEL interaction. The highly sophisticated dynamics involved in a FEL process was the main obstacle hindering the development of general simulation tools for this problem. We present a numerical algorithm based on finite difference time domain/Particle in cell (FDTD/PIC) in a Lorentz boosted coordinate system which is able to fulfil a full-wave simulation of a FEL process. The developed software offers a suitable tool for the analysis of FEL interactions without considering any of the usual approximations. A coordinate transformation to bunch rest frame makes the very different length scales of bunch size, optical wavelengths and the undulator period transform to values with the same order. Consequently, FDTD/PIC simulations in conjunction with efficient parallelization techniques make the full-wave simulation feasible using the available computational resources. Several examples of free electron lasers are analyzed using the developed software, the results are benchmarked based on standard FEL codes and discussed in detail.
ЭКСПЕРИМЕНТАЛЬНОЕ ИССЛЕДОВАНИЕ ПРОНИКНОВЕНИЯ КВАНТОВЫХ ВИХРЕЙ В ОБЪЕМ СВЕРХТЕКУЧЕГО ГЕЛИЯ
Creators: name: Султанова М.Р.
name: Левченко А.А.
name: Ремизов И.А.
name: Селин П.Г.
Publisher: name: 39-е Совещание по физике низких температур (Международная конференция), посвященное 300-летию Российской академии наук
Year: 2024
Subjects: Физика низких температур

description: Экспериментально исследовано движение инжектированных отрицательных зарядов под свободной поверхностью жидкости, а также в объеме сверхтекучего He-II при температурах T≈1.7 K в статических электрических полях различной конфигурации.
Resurrection and eschatology in the Reformation formularies of the Church of England, 1536-1571
Creators: name: Patrick, Timothy Raoul Christopher
Publisher: name: Macquarie University
Year: 2022
Subjects: Other education not elsewhere classified

description: This thesis seeks to fill a gap in current understandings of the English Reformation by the examining the official documents of the Church of England for their explicit and implicit teaching on questions of resurrection and eschatology. Prior to this work, some instances of the dilution of eschatology in in the official documents of the English Magisterial Reformers had been identified. Also, in line with the current trend in English Reformation historiography, there has been a number of works investigating eschatological beliefs at local and social levels. But nowhere has there been any attempt to log systematically the occurrences of, or changes in, eschatology in the Church's official formularies. The major conclusion of this research is that eschatology was progressively thinned out and made more ambiguous as these publications evolved during the Tudor period. In addition to drawing focused attention to these phenomena for the first time, this study also places the changes observed in the theological and political contexts of the period and proposes some explanations for them. The thesis divides the documents into two sub-periods - the pre- and post-Marian - in recognition that the contexts and priorities of each were quite different. It also examines the Church's formularies divided into three categories : those intended for the clergy and hierarchy such as the Articles of Religion, those prepared for public worship such as the Prayer Books, Bibles and Homilies, and those directed towards private discipleship such as the Catechisms and Primers. While some families of documents such as the Prayer Books have been well-studied, others, including the official Homilies, Catechisms and Primers, are far less well-known. Additionally, there is a great deal even within some of the better-known documents that has not been previously given much scholarly attention. For example, the prefatory material in some of the early English Bibles has been relatively untouched. A secondary accomplishment of this thesis, therefore, is that it pushes forward the general study of the English formularies and, guided by the primary research question, makes many fresh observations upon them.
ЭКСЦЕСС АНДРЕЕВСКОГО КОНДАКТАНСА ГРЯЗНОГО SIN-КОНТАКТА
Creators: name: Кирпиченков В. Я.
name: Кирпиченкова Н. В.
name: Лозин О.И.
name: Кулиничев Е.Р.
Publisher: name: 39-е Совещание по физике низких температур (Международная конференция), посвященное 300-летию Российской академии наук
Year: 2024
Subjects: Физика низких температур

description: В рамках модели слабого структурного беспорядка Лифшица для неупорядоченного I-слоя нами теоретически показано, что присутствие в ближайшей окрестности электронного химпотенциала контакта мю случайных узкозонных квантовых закороток, вдоль которых сосредоточены квантовые резонансно-перколяционные траектории туннелирующих электронов в неупорядоченном I-слое, решает эту теоретическую проблему.
One dimensional magneto-optical compression of a cold CaF molecular beam
Creators: name: Chae, Eunmi
name: Anderegg, Loic
name: Augenbraun, Benjamin L.
name: Ravi, Aakash
name: Hemmerling, Boerge
name: Hutzler, Nicholas R.
name: Collopy, Alejandra L.
name: Ye, Jun
name: Ketterle, Wolfgang
name: Doyle, John M.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Atomic Physics (physics.atom-ph)
subject: FOS: Physical sciences

description: We demonstrate with a RF-MOT the one dimensional, transverse magneto-optical compression of a cold beam of calcium monofluoride (CaF). By continually alternating the magnetic field direction and laser polarizations of the magneto-optical trap, a photon scattering rate of $2π\times$0.4 MHz is achieved. A 3D model for this RF-MOT, validated by agreement with data, predicts a 3D RF-MOT capture velocity for CaF of 5 m/s.
Artemisinin displays bactericidal activity via copper-mediated DNA damage
Creators: name: Chung, In-Young
name: Jang, Hye-Jeong
name: Yoo, Yeon-Ji
name: Hur, Joonseong
name: Oh, Hyo-Young
name: Kim, Seok-Ho
name: Cho, You-Hee
Publisher: name: Taylor & Francis
Year: 2022
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Science Policy
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences

description: Artemisinin (ARS) and its semi-synthetic derivatives are effective drugs to treat malaria and possess multiple therapeutic activities based on their endoperoxide bridge. Here, we showed that ARS displayed antibacterial efficacy in Drosophila systemic infections caused by bacterial pathogens but killed only Vibrio cholerae (VC) in vitro, involving reactive oxygen species (ROS) generation and/or DNA damage. This selective antibacterial activity of ARS was attributed to the higher intracellular copper levels in VC, in that the antibacterial activity was observed in vitro upon addition of cuprous ions even against other bacteria and was compromised by the copper-specific chelators neocuproine (NC) and triethylenetetramine (TETA) in vitro and in vivo. We suggest that copper can enhance or reinforce the therapeutic activities of ARS to be repurposed as an antibacterial drug for the treatment of bacterial infections.
Geometric quantum speed limits: a case for Wigner phase space
Creators: name: Deffner, Sebastian
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The quantum speed limit is a fundamental upper bound on the speed of quantum evolution. However, the actual mathematical expression of this fundamental limit depends on the choice of a measure of distinguishability of quantum states. We show that quantum speed limits are universally characterized by the Schatten-$p$-norm of the generator of quantum dynamics. Since computing Schatten-$p$-norms can be mathematically involved, we then develop an alternative approach in Wigner phase space. We find that the quantum speed limit in Wigner space is fully equivalent to expressions in density operator space, but that the new bound is significantly easier to compute. Our results are illustrated for the parametric harmonic oscillator and for quantum Brownian motion.
description: 12 pages, 2 figures