cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Resonances in 1D disordered systems: localization of energy and resonant transmission
Creators: name: Bliokh, K. Yu.
name: Bliokh, Yu. P.
name: Freilikher, V.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: Localized states in one-dimensional open disordered systems and their connection to the internal structure of random samples have been studied. It is shown that the localization of energy and anomalously high transmission associated with these states are due to the existence inside the sample of a transparent (for a given resonant frequency) segment with the minimal size of order of the localization length. A mapping of the stochastic scattering problem in hand onto a deterministic quantum problem is developed. It is shown that there is no one-to-one correspondence between the localization and high transparency: only small part of localized modes provides the transmission coefficient close to one. The maximal transmission is provided by the modes that are localized in the center, while the highest energy concentration takes place in cavities shifted towards the input. An algorithm is proposed to estimate the position of an effective resonant cavity and its pumping rate by measuring the resonant transmission coefficient. The validity of the analytical results have been checked by extensive numerical simulations and wavelet analysis.
Correlational quantum theory and correlation constraints
Creators: name: Jia, Ding
Publisher: name: arXiv
Year: 2020
Subjects: subject: Quantum Physics (quant-ph)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: A correlational dialect is introduced within the quantum theory language to give a unified treatment of finite-dimensional informational/operational quantum theories, infinite-dimensional relativistic quantum theories, and quantum gravity. Theories are written in terms of correlation diagrams which specify correlation types and weights. Grouping similar correlation diagrams leads to generalized Feynman diagrams, which in special cases reduce to the familiar Feynman diagrams from quantum field theories. The correlational formalism is applied in a study of correlation constraints, revealing new classes of quantum processes that evade previous characterizations of general quantum processes. The results apply to quantum theories of various kinds, including time-asymmetric theories, time-symmetric theories, theories without predefined time, and theories with indefinite causal structures.
description: v2 with updated discussions on Feynman diagrams; 6 pages, 2 figures, plus appendix
Nitidulidae Latreille 1802
Creators: name: Wappes, James E.
name: Arias, Julieta Ledezma
name: Nearns, Eugenio H.
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Nitidulidae

description: Nitidulidae   Amborotubus clarkei Leschen and Carlton, 2004: 448.
 Pocadius wappesi Cline, 2008: 106.
description: Published as part of Wappes, James E., Arias, Julieta Ledezma & Nearns, Eugenio H., 2009, List of Coleoptera Holotypes in Museo de Historia Natural, Noel Kempff Mercado, Universidad Autonoma " Gabriel Rene Moreno, Santa Cruz de la Sierra, Bolivia, pp. 1-8 in Insecta Mundi 2009 (81) on page 5, DOI: 10.5281/zenodo.5405079
Direct measurement of the phase coherence length in a GaAs/GaAlAs square network
Creators: name: Ferrier, Meydi
name: Angers, Lionel
name: Gueron, Sophie
name: Bouchiat, Helene
name: Texier, Christophe
name: Montambaux, Gilles
name: Mailly, Dominique
name: Rowe, Alistair C. H.
Publisher: name: arXiv
Year: 2004
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: The low temperature magnetoconductance of a large array of quantum coherentloops exhibits Altshuler-Aronov-Spivak oscillations which periodicitycorresponds to 1/2 flux quantum per loop.We show that the measurement of the harmonics content in a square networkprovides an accurate way to determine the electron phase coherence length$L\_ϕ$ in units of the lattice length without any adjustableparameters.We use this method to determine $L\_ϕ$ in a network realised from a 2Delectron gas (2DEG) in a GaAS/GaAlAs heterojunction. The temperaturedependence follows a power law $T^{-1/3}$ from 1.3 K to 25 mK with nosaturation, as expected for 1D diffusive electronic motion andelectron-electron scattering as the main decoherence mechanism.
description: Additional experimental data in version 2
Relationship of Sonographic Tumor Size and Grading of Invasive Ductal Carcinoma
Not Otherwise Specified (IDC
NOS) of Breast Cancer on Axillary Nodal Metastasis
Creators: name: Nuttiya Posawat
Publisher: name: Thammasat Printing House
Year: 2021
Subjects: Breast cancer
Axillary lymph node metastasis
Tumor size
Tumor grading

description: Asian Medical Journal and Alternative Medicine, 21, 1, 21
Fertilizer Use by Crop at the Country Level (1990–2010)
Creators: name: Rosas, Francisco
name: Rosas, Francisco
Publisher: name: Unknown
Year: 2012
Subjects: subject: Crop Production/Industries
subject: agriculture
subject: fertilizer
subject: nitrogen
subject: phosphate
subject: potash

description: We compute the fertilizer use in corn, cotton, soybeans, and rapeseed in the period from 1990 to 2010 for a set of selected countries. In each case, we present the consumption of nitrogen, phosphate, and potash by crop and by year, reporting both the fertilizer application rates (in kilograms per hectare) and the fertilizer consumption (in thousand metric tonnes). We allocate a country’s total nutrient consumption in a given year among competing crops based on publicly available statistics. The resulting allocation of fertilizer among crops is a function of the country’s nutrients total use, the country’s cropped areas, crop world prices, and crop- and country-specific fertilizer application rates for some years. In this report we show results on fertilizer consumption by crop for the top fertilizer consuming countries, and a downloadable MS Excel file “FertilizerDemandByCropData.xls” shows the complete set of results.
Thermodynamic perturbation theory of the phase behaviour of colloid / interacting polymer mixtures
Creators: name: Rotenberg, B.
name: Dzubiella, J.
name: Hansen, J. -P.
name: Louis, A. A.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: We use thermodynamic perturbation theory to calculate the free energies and resulting phase diagrams of binary systems of spherical colloidal particles and interacting polymer coils in good solvent within an effective one-component representation of such mixtures, whereby the colloidal particles interact via a polymer-induced depletion potential. MC simulations are used to test the convergence of the high temperature expansion of the free energy. The phase diagrams calculated for several polymer to colloid size ratios differ considerably from the results of similar calculations for mixtures of colloids and ideal (non-interacting) polymers, and are in good overall agreement with the results of an explicit two-component representation of the same system, which includes more than two-body depletion forces.
description: 8 pages, 8 figures, submitted to Molecular Physics
The Appropriate Use of Conventional Abdominal Radiographs and Its Usefulness in Non-Traumatic Acute Abdomen Patients
Creators: name: Sornsupha Limchareon
Publisher: name: Thammasat Printing House
Year: 2021
Subjects: Abdominal radiograph
Acute abdominal pain
Appropriateness criteria
Imaging

description: Asian Medical Journal and Alternative Medicine, 21, 1, 28
MOESM2 of Human protein-RNA interaction network is highly stable across mammals
Creators: name: Aarthi Ramakrishnan
name: Sarath Chandra Janga
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Additional file 2. Boxplots showing the extent of conservation of binding sites occurring in the three genic regions (5’, middle and 3’) for the target genes of each of the 60 human RBPs. Each box plot shows the distribution of the extent of conservation of the binding sites in the three regions (5’, middle and 3’) compared to the overall extent of conservation of the binding sites across all the regions as a reference for a specific RBP. Conservation analyses was performed using experimentally identified binding sites of an RBP across 46 species.
Dacne Latreille 1796
Creators: name: Skelley, Paul E.
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Erotylidae
Dacne

description: Genus DACNE Latreille 1796
 Dacne Latreille 1796: 12. Type species: Dermestes bipustulatus Thunberg 1781: 6, subsequent designation Latreille 1810: 427.
 Diagnosis. This genus is generally recognized by its small size (usually less than 2.5 mm), acuminate maxillary and labial palpi, broad mentum, distinctly clubbed antenna, anterior medial pronotal disc somewhat swollen forward, and distinctively pentamerous tarsi.
 Remarks. Two Asian species, Dacne (Dacne) picta Crotch (1873c) and D. (D.) japonica Crotch (1873c), are occasionally pests in dried mushrooms (Boyle 1956, Savary 1995) and have been intercepted in international shipments of these products. In the past, researchers and agricultural officials from countries worldwide have asked for assistance identifying Dacne specimens intercepted in dried mushrooms. While these species do not seem to be established in countries where they have been intercepted, it is always a possibility, and it is likely these species may eventually be intercepted in the West Indies. Dacne picta and D. japonica can be distinguished from most members of Dacne by their distinctly banded color pattern. Skelley (2004) presented a key to Dacne species of the world.
 Within the genus, D. brodzinskyi in amber from the Dominican Republic and Dacne ducke Skelley (2004) from Brazil share characters which indicate they belong to a unique New World clade separate from other members of the genus as discussed in Skelley (2004). Therefore, a new subgenus is here erected for these two species, giving Dacne four subgenera.
description: Published as part of Skelley, Paul E., 2009, Pleasing fungus beetles of the West Indies (Coleoptera: Erotylidae: Erotylinae), pp. 1-94 in Insecta Mundi 2009 (82) on pages 9-12, DOI: 10.5281/zenodo.5405085
Comparison of Treatment Response Assessment for Stage IV NSCLC after Chemotherapy Between Non-Contrast and Contrast-Enhanced CT Scans of The Chest
Creators: name: Amolchaya Kwankua
Publisher: name: Thammasat Printing House
Year: 2021
Subjects: Non-contrast chest CT
Non-small cell lung cancer
Chemotherapy
Treatment response assessment

description: Asian Medical Journal and Alternative Medicine, 21, 1, 38
AutoFCL: Automatically Tuning Fully Connected Layers for Handling Small Dataset
Creators: name: Basha, S. H. Shabbeer
name: Vinakota, Sravan Kumar
name: Dubey, Shiv Ram
name: Pulabaigari, Viswanath
name: Mukherjee, Snehasis
Publisher: name: arXiv
Year: 2020
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Machine Learning (cs.LG)
subject: Image and Video Processing (eess.IV)
subject: FOS: Computer and information sciences
subject: FOS: Electrical engineering, electronic engineering, information engineering

description: Deep Convolutional Neural Networks (CNN) have evolved as popular machine learning models for image classification during the past few years, due to their ability to learn the problem-specific features directly from the input images. The success of deep learning models solicits architecture engineering rather than hand-engineering the features. However, designing state-of-the-art CNN for a given task remains a non-trivial and challenging task, especially when training data size is less. To address this phenomena, transfer learning has been used as a popularly adopted technique. While transferring the learned knowledge from one task to another, fine-tuning with the target-dependent Fully Connected (FC) layers generally produces better results over the target task. In this paper, the proposed AutoFCL model attempts to learn the structure of FC layers of a CNN automatically using Bayesian optimization. To evaluate the performance of the proposed AutoFCL, we utilize five pre-trained CNN models such as VGG-16, ResNet, DenseNet, MobileNet, and NASNetMobile. The experiments are conducted on three benchmark datasets, namely CalTech-101, Oxford-102 Flowers, and UC Merced Land Use datasets. Fine-tuning the newly learned (target-dependent) FC layers leads to state-of-the-art performance, according to the experiments carried out in this research. The proposed AutoFCL method outperforms the existing methods over CalTech-101 and Oxford-102 Flowers datasets by achieving the accuracy of 94.38% and 98.89%, respectively. However, our method achieves comparable performance on the UC Merced Land Use dataset with 96.83% accuracy. The source codes of this research are available at https://github.com/shabbeersh/AutoFCL.
description: This paper is published in Neural Computing & Applications Journal
MOESM2 of Estimating the risk of acute kidney injury associated with use of diuretics and renin angiotensin aldosterone system inhibitors: A population based cohort study using the clinical practice research datalink
Creators: name: Jemima Scott
name: Jones, Tim
name: Redaniel, Maria
name: May, Margaret
name: Ben-Shlomo, Yoav
name: Caskey, Fergus
Publisher: name: figshare
Year: 2019
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Marine Biology
subject: Computational Biology

description: Additional file 2. Excluding patients with strong indication for renin-angiotensin-aldosterone blockade (proteinuric chronic kidney disease and congestive cardiac failure). A sensitivity analysis.
A Gravity Model for Components of Imports
Creators: name: Kandogan, Yener
name: Kandogan, Yener
Publisher: name: Unknown
Year: 2009
Subjects: subject: International Development
subject: International Relations/Trade
subject: Marketing
subject: FOS: Economics and business
subject: Horizontal and vertical intra-industry trade
subject: cultural proximity
subject: religion

description: This paper develops a gravity model to explain different components of imports. It is shown that specific variables from competing trade theories affect each component differently: As economic sizes or relative factor endowments become similar, the volume of intra-industry imports, especially that of its horizontal component increases. Furthermore, the typical variables of an extended gravity model have different impact on each component: Colonial relations are important determinants of inter-industry imports whereas cultural proximity based on religion and language plays a more crucial role in determining intra-industry imports. Overall, the significance of these different effects suggests that the proposed decomposition of imports into its components removes a widespread but unnecessary restriction in the gravity models.
Magneto-optical rotation of spectrally impure fields and its nonlinear dependence on optical density
Creators: name: Agarwal, G. S.
name: Dasgupta, Shubhrangshu
Publisher: name: arXiv
Year: 2003
Subjects: subject: Optics (physics.optics)
subject: Atomic Physics (physics.atom-ph)
subject: FOS: Physical sciences

description: We calculate magneto-optical rptation of spectrally impure fileds in an optically thick cold atmic medium. We show that the spectral impurity leads to non-linear dependence of the rotation angle on optical density. Using our calculations, we provide a quanttative analysis of the recent experimental results of G. Labeyrie et al. [Phys. Rev. A 64, 033402 (2001)] using cold Rb$^{85}$ atoms.
description: 6 pages, 5 Figures, ReVTeX4, Submitted to PRA
Analysis of the Behavior of the New Zealand Dollar Exchange Rate: Comparison of Four Major Models
Creators: name: Hsing, Yu
name: Hsing, Yu
Publisher: name: Unknown
Year: 2009
Subjects: subject: Financial Economics
subject: International Relations/Trade
subject: Marketing
subject: FOS: Economics and business
subject: Research Methods/ Statistical Methods
subject: purchasing power parity
subject: uncovered interest parity
subject: monetary model
subject: Mundell Fleming model

description: The purpose of this paper is to compare four major exchange rate models. Based on the value of adjusted R2, the uncovered interest parity model performs best, followed by the purchasing power parity model using the relative PPI, the Mundell-Fleming model, and the monetary model. The unexpected negative sign of the relative money supply in the monetary model and the unexpected negative sign of real money supply and the domestic interest rate in the Mundell-Fleming model suggest that more study is needed to examine the behavior of exchange rate fluctuations for the New Zealand dollar.
Configuration interaction approaches for solving quantum impurity models
Creators: name: Jin, Zuxin
name: Dou, Wenjie
name: Subotnik, Joseph E.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: We develop several configuration interaction approaches for characterizing the electronic structure of an adsorbate on a metal surface (at least in model form). When one can separate adsorbate from substrate, these methods can achieve a reasonable description of adsorbate on-site electron-electron correlation in the presence of a continuum of states. While the present paper is restricted to the Anderson impurity model, there is hope that these methods can be extended to ab initio Hamiltonians, and provide insight into the structure and dynamics of molecule-metal surface interactions.
description: 23 pages, 5 figures
Antillengis epochthidius Skelley, 2009, new species
Creators: name: Skelley, Paul E.
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Erotylidae
Antillengis
Antillengis epochthidius

description: Antillengis epochthidius Skelley, new species
Figure 1b, 32-34, 36-37
 Diagnosis. Antillengis epochthidius is recognized by: large body size (greater than 9 mm long), pentagonal mental plate, and a broad poorly defined gular-submental groove.
 Description. Length 9.2-9.8 mm; width 4.5-4.6 mm. Body dark red-brown nearly black; antennae, palpi, legs, and apical 4 abdominal ventrites reddish-brown; elytral apex with red-brown mark which extends laterally to middle (Fig. 36).
Head with base coarsely punctate, puncture size = an ocular facet diameter, separated by 0.5-1.0 x their diameter; vertex and epistomal punctures = 0.3 x ocular facet diameter, separated by 2-4 x their diameter on vertex, becoming denser on epistome. Mentum transverse, plate width = 2.2 x length, plate pentagonal, sides short, anterior margin obtusely angled and broadly rounded medially. Gular-submental groove broad, poorly defined; in addition to few punctures laterally, gula with sculpture or punctures posterior of groove (Fig. 32).
Pronotal lateral margin straight at base, evenly arched toward eyes anteriorly. Elytral strial punctures large, indistinctly impressed, same size or smaller than coarse punctures at base of pronotum; intervals finely punctate, puncture size = fine pronotal punctures.
 Prosternum with anterior marginal bead broad and well defined medially, becoming narrow and weakly defined laterally; coarse punctures continue narrowly connected across midline anterior of coxae. Genitalia similar to A. brunnipes (Fig. 33-34).
description: Published as part of Skelley, Paul E., 2009, Pleasing fungus beetles of the West Indies (Coleoptera: Erotylidae: Erotylinae), pp. 1-94 in Insecta Mundi 2009 (82) on page 18, DOI: 10.5281/zenodo.5405085
$ΔS=0$ Effective Weak Chiral Lagrangian from the Instanton Vacuum
Creators: name: Lee, H-J.
name: Hyun, C. H.
name: Lee, C. -H.
name: Kim, H. -Ch.
Publisher: name: arXiv
Year: 2004
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We investigate the $ΔS=0$ effective chiral Lagrangian from the instanton vacuum. Based on the $ΔS=0$ effective weak Hamiltonian from the operator product expansion and renormalization group equations, we derive the strangeness-conserving effective weak chiral Lagrangian from the instanton vacuum to order ${\cal O}(p^2)$ and the next-to-leading order in the $1/N_c$ expansion at the quark level. We find that the quark condensate and a dynamical term which arise from the QCD and electroweak penguin operators appear in the next-to-leading order in the $1/N_c$ expansion for the $ΔS =0$ effective weak chiral Lagrangian, while they are in the leading order terms in the $ΔS = 1$ case. Three different types of the form factors are employed and we find that the dependence on the different choices of the form factor is rather insensitive. The low-energy constants of the Gasser-Leutwyler type are determined and discussed in the chiral limit.
description: Final version accepted for publication in Eur. Phys. J. C
Dissipative dynamics of an extended magnetic nanostructure: Spin necklace in a metallic environment
Creators: name: Shah, N.
name: Millis, A. J.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We study theoretically the dynamics of an ``xxz'' spin necklace coupled to a conduction electron sea, a model system for a nanostructure in a dissipative environment. We extract the long-time behavior via a mapping to a multichannel Coulomb gas problem followed by a scaling analysis. The strong quantum fluctuations of the necklace cause a nontrivial dependence of couplings on system size which we extract via an analysis involving the ``boundary condition changing operator'', and confirm via a detailed numerical evaluation of one case.
description: 4 pages, 4 figures
Effect of Steaming Process on Chemical Content and Biological Activity of Curcuma zedoaria Extract
Creators: name: Navaporn Pimrat
Publisher: name: Thammasat Printing House
Year: 2021
Subjects: Curcuma zedoaria
Curcuminoids
Steamed rhizome
Anti-microbial activity
Antiinflammatory activity

description: Asian Medical Journal and Alternative Medicine, 21, 1, 45
New constraints on the physical conditions in H$_2$-bearing GRB-host damped Lyman-$α$ absorbers
Creators: name: Heintz, K. E.
name: Bolmer, J.
name: Ledoux, C.
name: Noterdaeme, P.
name: Krogager, J. -K.
name: Fynbo, J. P. U.
name: Jakobsson, P.
name: Covino, S.
name: D'Elia, V.
name: De Pasquale, M.
name: Hartmann, D. H.
name: Izzo, L.
name: Japelj, J.
name: Kann, D. A.
name: Kaper, L.
name: Petitjean, P.
name: Rossi, A.
name: Salvaterra, R.
name: Schady, P.
name: Selsing, J.
name: Starling, R.
name: Tanvir, N. R.
name: Thöne, C. C.
name: Postigo, A. de Ugarte
name: Vergani, S. D.
name: Watson, D.
name: Wiersema, K.
name: Zafar, T.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We report the detections of molecular hydrogen (H$_2$), vibrationally-excited H$_2$ (H$^*_2$), and neutral atomic carbon (CI), in two new afterglow spectra of GRBs\,181020A ($z=2.938$) and 190114A ($z=3.376$), observed with X-shooter at the Very Large Telescope (VLT). Both host-galaxy absorption systems are characterized by strong damped Lyman-$α$ absorbers (DLAs) and substantial amounts of molecular hydrogen with $\log N$(HI, H$_2$) = $22.20\pm 0.05,~20.40\pm 0.04$ (GRB\,181020A) and $\log N$(HI, H$_2$) = $22.15\pm 0.05,~19.44\pm 0.04$ (GRB\,190114A). The DLA metallicites, depletion levels and dust extinctions are [Zn/H] = $-1.57\pm 0.06$, [Zn/Fe] = $0.67\pm 0.03$, and $A_V = 0.27\pm 0.02$\,mag (GRB\,181020A) and [Zn/H] = $-1.23\pm 0.07$, [Zn/Fe] = $1.06\pm 0.08$, and $A_V = 0.36\pm 0.02$\,mag (GRB\,190114A). We then examine the molecular gas content of all known H$_2$-bearing GRB-DLAs and explore the physical conditions and characteristics of these systems. We confirm that H$_2$ is detected in all CI- and H$^*_2$-bearing GRB absorption systems, but that these rarer features are not necessarily detected in all GRB H$_2$ absorbers. We find that a large molecular fraction of $f_{\rm H_2} \gtrsim 10^{-3}$ is required for CI to be detected. The defining characteristic for H$^*_2$ to be present is less clear, though a large H$_2$ column density is an essential factor. We then derive the H$_2$ excitation temperatures of the molecular gas and find that they are relatively low with $T_{\rm ex} \approx 100 - 300$\,K, however, there could be evidence of warmer components populating the high-$J$ H$_2$ levels in GRBs\,181020A and 190114A. Finally, we demonstrate that the otherwise successful X-shooter GRB afterglow campaign is hampered by a significant dust bias excluding the most dust-obscured H$_2$ absorbers from identification [Abridged].
description: 15 pages, 15 figures + Appendix. Accepted for publication in A&A
Additional file 2 of Reliable genomic strategies for species classification of plant genetic resources
Creators: name: Van Bemmelen Van Der Plaat, Artur
name: Van Treuren, Rob
name: Van Hintum, Theo J. L.
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 2. Neighbour-Joining tree of Helianthus species represented by 10 or more accessions. The number of divergent sites was used as a measure of distance. Potentially misclassified accessions (niv07, pet02, max148, and pet88 ) are marked by a black asterisk.
JayaDB Theory
Creators: name: Benanav, Dan
Publisher: name: Zenodo
Year: 2021
Subjects: Relational Database Management System
DBMS
Object-Oriented Database
Graph Database
NoSQL
Binary Relational Model
Object-Relational Mapping
ORM
Object-Relational Impedance Mismatch
Document Store

description: Describes the underlying theory of the JayaDB system.
Is the CAPM Dead or Alive in the Brazilian Market?
Creators: name: Yoshino, Joe Akira
name: Santos, Edson Bastos E
name: Yoshino, Joe Akira
name: Santos, Edson Bastos E
Publisher: name: Unknown
Year: 2009
Subjects: subject: Demand and Price Analysis
subject: Research and Development/Tech Change/Emerging Technologies
subject: Research Methods/ Statistical Methods
subject: asset pricing
subject: panel CAPM
subject: Fama and French's three-factor model
subject: style indexes

description: The central purpose of this work is to test the Sharpe-Lintner-Black Capital Asset Pricing Model in the Brazilian equity market. We have concluded that the CAPM is dead in the Brazilian equity market because, besides using the market premiums to explain the panel equity premiums, there are also some anomalies, such as, the firm size, the equity price-to-book value, the dividend yield, and the price-earnings ratio. Furthermore, by using the recent panel cointegration FMOLS (fully modified OLS) estimator, this paper corroborates the Fama & French three-factor model (1992, 1993). This work finds also two new three-factor models to explain the local market that satisfy the non-arbitrage condition. These results are important for the purpose of asset pricing and hedging in the Brazilian equity market.
Imprint of the magnetic activity cycle on the asteroseismic characterisation of the Sun
Creators: name: Bétrisey, Jérôme
name: Farnir, Martin
name: Breton, Sylvain N.
name: García, Rafael A.
name: Broomhall, Anne-Marie
name: Amarsi, Anish M.
name: Kochukhov, Oleg
Publisher: name: Zenodo
Year: 2024
Subjects: subject: Sun: activity
subject: Sun:evolution
subject: Sun:fundamental parameters
subject: Sun:helioseismology
subject: Sun:magnetic fields
subject: Sun:oscillations
subject: Asteroseismology

description: Asteroseismic modelling will play a key role in future space-based missions, such as PLATO, CubeSpec, and Roman. Depite remarkable achievements, asteroseismology has revealed significant discrepancies in the physics of theoretical stellar models, which have the potential to bias stellar characterisation at the precision level demanded by PLATO. The current modelling strategies largely overlook magnetic activity, assuming that its effects are masked within the parametrisation of the so-called "surface effects".

Given the presence of activity cycles in multiple solar-like oscillators, and activity variations in a significant fraction of Kepler observations of main-sequence stars (Santos et al. 2019, 2021, 2023), we measured the impact of magnetic activity on the asteroseismic characterisation of the Sun based on 26.5 years of GOLF and BiSON observations (Bétrisey et al. 2024). While magnetic activity is partially absorbed in the treatment of surface effects, we found a discernible imprint of the activity cycle in the determination of the solar age. This imprint persists across both BiSON and GOLF datasets, with significant variations of up to 6.5% observed between solar minima and maxima. As the Sun exhibits low levels of activity, our study underscores the looming challenge posed by magnetic activity for future photometry missions, and prompts a potential reevaluation of the asteroseismic characterisation of the most active Kepler targets.
High-dimensional frequency crystals and quantum walks in electro-optic microcombs
Creators: name: Reimer, Christian
name: Hu, Yaowen
name: Shams-Ansari, Amirhassan
name: Zhang, Mian
name: Loncar, Marko
Publisher: name: arXiv
Year: 2019
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Synthetic optical structures have enabled studies of various physical processes and discoveries of new phenomena in a controllable manner. Past realizations, using for example coupled optical waveguides, were however limited in size and dimensionality. Here we theoretically propose and experimentally demonstrate optical frequency crystals of arbitrary dimensions, formed by hundreds of coupled spectral modes within an on-chip electro-optic frequency comb. We show a direct link between the measured optical transmission spectrum and the density-of-state of frequency crystals, validated by measurements of one-, two-, three- and four-dimensional crystals with no restrictions to further expand the dimensionality. We measure signatures of quantum random walks and Bloch oscillations in the frequency domain of light in one- and two-dimensional synthetic lattices. Our work employs a quantum description of phase modulation11 to describe resonant electro-optic frequency combs, and shows that they enable the study of exotic crystal properties, topologies and quantum dynamics, while providing a versatile platform to manipulate quantum information in the optical frequency domain.
description: 22 pages, 4 figures
Additional file 3 of Reliable genomic strategies for species classification of plant genetic resources
Creators: name: Van Bemmelen Van Der Plaat, Artur
name: Van Treuren, Rob
name: Van Hintum, Theo J. L.
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 3. RandomForest outlier scores for all sunflower accessions. The dashed line represents the cut-off score used, which is 10.
MOESM1 of Estimating the risk of acute kidney injury associated with use of diuretics and renin angiotensin aldosterone system inhibitors: A population based cohort study using the clinical practice research datalink
Creators: name: Jemima Scott
name: Jones, Tim
name: Redaniel, Maria
name: May, Margaret
name: Ben-Shlomo, Yoav
name: Caskey, Fergus
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 1. Unexposed patients matched (1:1) to exposed patients on age (within 3 years), sex and time between prescription of any other antihypertensive medication and exposure date (within 6 months). A sensitivity analysis.
Energetics and atomic mechanisms of dislocation nucleation in strained epitaxial layers
Creators: name: Trushin, O.
name: Granato, E.
name: Ying, S. C.
name: Salo, P.
name: Ala-Nissila, T.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: We study numerically the energetics and atomic mechanisms of misfit dislocation nucleation and stress relaxation in a two-dimensional atomistic model of strained epitaxial layers on a substrate with lattice misfit. Relaxation processes from coherent to incoherent states for different transition paths are studied using interatomic potentials of Lennard-Jones type and a systematic saddle point and transition path search method. The method is based on a combination of repulsive potential minimization and the Nudged Elastic Band method. For a final state with a single misfit dislocation, the minimum energy path and the corresponding activation barrier are obtained for different misfits and interatomic potentials. We find that the energy barrier decreases strongly with misfit. In contrast to continuous elastic theory, a strong tensile-compressive asymmetry is observed. This asymmetry can be understood as manifestation of asymmetry between repulsive and attractive branches of pair potential and it is found to depend sensitively on the form of the potential.
description: 11 pages, 9 figures, to appear in Phys. Rev. B
MOESM1 of Human protein-RNA interaction network is highly stable across mammals
Creators: name: Aarthi Ramakrishnan
name: Sarath Chandra Janga
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Additional file 1. Heatmap showing the conservation of RBPs across species. The columns in the heatmap represent species, whereas the rows represent RBPs analyzed in this study for their binding site conservation. Each cell in the heatmap corresponds to the presence of the RBP in the specie.
Fragmentation in Massive Star Formation
Creators: name: Beuther, H.
name: Schilke, P.
Publisher: name: arXiv
Year: 2004
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Studies of evolved massive stars indicate that they form in a clustered mode. During the earliest evolutionary stages, these regions are embedded within their natal cores. Here, we show high-spatial-resolution interferometric dust continuum observations disentangling the cluster-like structure of a young massive star-forming region. The derived protocluster mass distribution is consistent with the stellar initial mass function. Thus, fragmentation of the initial massive cores may determine the initial mass function and the masses of the final stars. This implies that stars of all masses can form via accretion processes, and coalescence of intermediate-mass protostars appears not to be necessary.
description: 5 pages text plus 2 figures
Can UVB variations reconcile simulated quasar absorption lines at high redshift?
Creators: name: García, L. A.
name: Ryan-Weber, E. V.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: In this work, we present new calculations of the observables associated with synthetic metal and HI absorption lines in the spectra of high redshift quasars, inspired by questions and limitations raised in work with a uniform Haardt-Madau 2012 ultraviolet background (UVB). We introduce variations at $z \sim$ 6 to the UVB and HI self--shielding and explore the sensitivity of the absorption features to modifications of the hardness of the UVB. We find that observed SiIV and low ionization states (e.g. CII, SiII, OI) are well represented by a soft UV ionizing field at $z =$ 6 but, this same prescription, fails to reproduce the statistical properties of the observed ion CIV absorber population. Therefore, we recommend a moderate reduction of the UVB at this redshift, an emissivity change between the UVB models that lies in between the Haardt-Madau 2012 emissivity J$_ν$ and one with a dex below J$_ν -$ 1 at 1 Ryd. On the other hand, variations in the HI self--shielding (SSh) prescription leave a non--negligible imprint in the calculated HI column density distribution function (CDDF) at $z =$ 4 and the comoving mass density of neutral Hydrogen (and the associated calculation with damped Lyman--$α$ absorber systems) at 4 $< z
description: 23 pages, 15 figures
Additional file of Reliable genomic strategies for species classification of plant genetic resources
Creators: name: Van Bemmelen Van Der Plaat, Artur
name: Van Treuren, Rob
name: Van Hintum, Theo J. L.
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file of Reliable genomic strategies for species classification of plant genetic resources
Are Farmers in the Transitional Economies Likely to Benefit from Forming Collaborative Marketing Groups?
Creators: name: Murray-Prior, Roy B.
name: Murray-Prior, Roy B.
Publisher: name: Unknown
Year: 2008
Subjects: subject: Agribusiness
subject: Agricultural and Food Policy
subject: Marketing
subject: FOS: Economics and business
subject: comparative advantage
subject: cooperative
subject: institutional structure
subject: social capital
subject: trust

description: Trade liberalization has opened up the food market in many transitional economies. This has created an opportunity for smallholder farmers to access higher-value markets, but it has also exposed them to competition from trading partners. Key issues in linking smallholder producers to higher-value markets are overcoming the diseconomies of size, poor infrastructure, lack of market signals for quality, high transaction costs, and the poor quality associated with traditional supply chains. A common suggestion made by many development workers and politicians to overcome these problems is to encourage farmers to form collaborative marketing groups. Furthermore, there is a common misperception that market intermediaries are taking advantage of the farmers and are the primary cause of poor farm-gate prices. Some schemes which aim to help smallholder producers access higher prices (e.g., Fairtrade) insist that farmers be part of a cooperative that delivers the product to market. Unfortunately, there is abundant evidence from the experience of smallholder farmers in the transitional economies that collaborative marketing groups are seldom competitive in either the traditional market or the emerging market. Th is paper will look at the question of if and under what conditions smallholder farmers in the transitional economies are likely to benefit from forming collaborative marketing groups. It will use evidence from the literature and the author’s experiences in researching the success of marketing groups in the Philippines and Papua New Guinea. The main finding is that most are doomed to fail unless key prerequisites exist: a comparative advantage for the group and a sufficient level of social capital and trust in the community. A lack of social capital and trust in PNG and the Philippines means that collaborative structures need to incorporate mechanisms that prevail over this problem.
First results from an aging test of a prototype RPC for the LHCb Muon System
Creators: name: Bizzeti, Andrea
name: Carboni, Giovanni
name: Collazuol, Gianmaria
name: De Capua, Stefano
name: Domenici, Danilo
name: Ganis, Gerardo
name: Messi, Roberto
name: Passaleva, Giovanni
name: Santovetti, Emanuele
name: Veltri, Michele
Publisher: name: arXiv
Year: 2003
Subjects: subject: Instrumentation and Detectors (physics.ins-det)
subject: FOS: Physical sciences

description: Recent results of an aging test performed at the CERN Gamma Irradiation Facility on a single--gap RPC prototype developed for the LHCb Muon System are presented. The results are based on an accumulated charge of about 0.45 C/cm$^2$, corresponding to about 4 years of LHCb running at the highest background rate. The performance of the chamber has been studied under several photon flux values exploiting a muon beam. A degradation of the rate capability above 1 kHz/cm$^2$ is observed, which can be correlated to a sizeable increase of resistivity of the chamber plates. An increase of the chamber dark current is also observed. The chamber performance is found to fulfill the LHCb operation requirements.
description: 6 pages, 9 figures, presented at the International Workshop on Aging Phenomena in Gaseous Detectors'', DESY-Hamburg (Germany), October 2001
Does cord blood leptin level mediate the association between neonatal body size and postnatal growth? Results from the EDEN mother–child cohort study
Creators: name: Taine, Marion
name: Khalfallah, Olfa
name: Forhan, Anne
name: Glaichenhaus, Nicolas
name: Charles, Marie-Aline
name: Heude, Barbara
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology

description: Background: Leptin is potentially involved in the correction of early postnatal growth of infants having deviated from their genetic trajectory in utero. Aim: To analyse the potential mediating role of cord blood leptin level in the association between neonatal anthropometry and early postnatal growth in the mother–child EDEN cohort. Subjects and methods: We included term newborns with information on leptin, birth weight and length, and weight and length SD-score changes over the first 2 months. The Baron and Kenny method was used to quantify the mediation contribution of leptin in the association between neonatal anthropometry and postnatal growth, considering several confounders. Analyses were stratified to consider sexual dimorphism. Results: A 1 SD higher birth weight was associated with a lower 2-months weight variation of 0.27 (0.18; 0.36) SD and a 0.16 (0.06; 0.26) SD, in boys and girls, respectively. Leptin explained 20% and 25% of these associations, respectively. Leptin did not mediate the association between birth length and birth-to-2 months length variation. Conclusion: Our results suggest that cord blood leptin may not be involved in the negative association between birth length and postnatal length growth but may play a modest mediating role in early postnatal catch-up or catch-down in weight.
Hydrostatic mass estimates of massive galaxy clusters: a study with varying hydrodynamics flavours and non-thermal pressure support
Creators: name: Pearce, Francesca A.
name: Kay, Scott T.
name: Barnes, David J.
name: Bower, Richard G.
name: Schaller, Matthieu
Publisher: name: arXiv
Year: 2019
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: We use a set of 45 simulated clusters with a wide mass range ($8\times 10^{13} < M_{500}~[$M$_{\odot}]~< 2\times 10^{15}$) to investigate the effect of varying hydrodynamics flavours on cluster mass estimates. The cluster zooms were simulated using the same cosmological models as the BAHAMAS and C-EAGLE projects, leading to differences in both the hydrodynamic solvers and the subgrid physics but still producing clusters which broadly match observations. At the same mass resolution as BAHAMAS, for the most massive clusters ($M_{500} > 10^{15}$ M$_{\odot}$), we find changes in the SPH method produce the greatest differences in the final halo, while the subgrid models dominate at lower mass. By calculating the mass of all of the clusters using different permutations of the pressure, temperature and density profiles, created with either the true simulated data or mock spectroscopic data, we find that the spectroscopic temperature causes a bias in the hydrostatic mass estimates which increases with the mass of the cluster, regardless of the SPH flavour used. For the most massive clusters, the estimated mass of the cluster using spectroscopic density and temperature profiles is found to be as low as 50 per cent of the true mass compared to $\sim$ 90 per cent for low mass clusters. When including a correction for non-thermal pressure, the spectroscopic hydrostatic mass estimates are less biased on average and the mass dependence of the bias is reduced, although the scatter in the measurements does increase.
description: 21 pages, 14 figures. Accepted for publication by MNRAS
Iphiclus (Neoogaster)
Creators: name: Skelley, Paul E.
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Erotylidae
Iphiclus

description: Key to Iphiclus (Neoogaster) species
 1. Elytra entirely yellow-brown, border often paler (Fig. 8, 47); elytra with paired striae (gemellate), punctures visible; Guadeloupe............  Iphiclus (Neoogaster) guadeloupensis (Fabricius)
 — Elytra yellow-brown with dark sutural margin (Fig. 9, 46); elytra with strial punctures obscure or lacking; Dominica...................................  Iphiclus (Neoogaster) suturalis (Lacordaire)
description: Published as part of Skelley, Paul E., 2009, Pleasing fungus beetles of the West Indies (Coleoptera: Erotylidae: Erotylinae), pp. 1-94 in Insecta Mundi 2009 (82) on page 29, DOI: 10.5281/zenodo.5405085
Characterizing the Root Landscape of Certificate Transparency Logs
Creators: name: Korzhitskii, Nikita
name: Carlsson, Niklas
Publisher: name: arXiv
Year: 2020
Subjects: subject: Networking and Internet Architecture (cs.NI)
subject: Cryptography and Security (cs.CR)
subject: FOS: Computer and information sciences
subject: C.2.4; E.3; C.4; H.2.0

description: Internet security and privacy stand on the trustworthiness of public certificates signed by Certificate Authorities (CAs). However, software products do not trust the same CAs and therefore maintain different root stores, each typically containing hundreds of trusted roots capable of issuing "trusted" certificates for any domain. Incidents with misissued certificates motivated Google to implement and enforce Certificate Transparency (CT). CT logs archive certificates in a public, auditable and append-only manner. The adoption of CT changed the trust landscape. As a part of this change, CT logs started to maintain their own root lists and log certificates that chain back to one of the trusted roots. In this paper, we present the first characterization of this emerging CT root store landscape, as well as the tool that we developed for data collection, visualization, and analysis of the root stores. We compare the logs' root stores and quantify their changes with respect to both each other and the root stores of major software vendors, look at evolving vendor CT policies, and show that root store mismanagement may be linked to log misbehavior. Finally, we present and discuss the results of a survey that we have sent to the log operators participating in Apple's and Google's CT log programs.
description: 9 pages