cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
GDT netCDF conventions for climate data
Creators: name: Gregory, Jonathan
name: Drach, Robert
name: Tett, Simon
Publisher: name: Zenodo
Year: 1998

description: This standard defines a set of conventions adopted in order to promote the interchange and sharing of files created with the netCDF Application Programmer Interface (API). This standard is based upon version 2.4 of netCDF. Documentation of the netCDF API may be found in the "NetCDF Users' Guide", Version 2.4, February 1996, available from URL https://www.unidata.ucar.edu/software/netcdf/.

This standard is intended for use with climate data, and was designed with data generated by GCMs particularly in mind. We recognise that there are limits to what a standard can practically cover; we restrict ourselves to issues which we believe to be of common and frequent concern in the design of climate metadata.  Although this is specifically a netCDF standard, we feel that most of the ideas are of wider application. Our main purpose is to propose a clear, adequate and flexible definition of the metadata needed for climate data. The metadata objects could be contained in file formats other than netCDF. Interconversion of the metadata between files of different formats will be facilitated if they are based on similar ideas. This standard is mostly additional to the conventions sponsored by COARDS (https://www.unidata.ucar.edu/software/netcdf/conventions.html). In the following standard, parts which are identical to or paraphrases of the COARDS standard are prefixed with COARDS. Material introduced by us in our original proposal of 10th June 1997 is prefixed with OGDT and material newly introduced in this version with NEW. Material from the Unidata netCDF users' guide is marked UNIDATA. All Unidata recommendations are supported here unless noted to the contrary. Comments indicate the places where there are differences between the standards. Comments given in emphasised type and CDL examples given in slanted typewriter type are not part of the standard. Note that examples typically show only the details relevant to the point under discussion, and hence may be incomplete with respect to the provisions of the complete standard.

NEW: Successful transmission of data depends upon the receiver of the file having software that will correctly it. For this reason, a strategy that is as conservative as possible in the use of attributes and encoding techniques will best promote portability of data.

COARDS: This standard also refers to the udunits standard supported by Unidata. The udunits package is available via https://www.unidata.ucar.edu/software/udunits/. OGDT: See section 11 for details of how the package is used by this convention to define units for physical quantities.

Useful comments from John Sheldon, Jan Polcher, Harvey Davies, John Caron, Steve Hankin and other contributors to the netCDF newsgroup have influenced the development of this standard. We have made some changes to gain greater compatibility with the NCAR CSM netCDF standard
Additional file 39 of Database-aided UHPLC-Q-orbitrap MS/MS strategy putatively identifies 52 compounds from Wushicha Granule to propose anti-counterfeiting quality-markers for pharmacopoeia
Creators: name: Li, Xican
name: Chen, Shaoman
name: Zeng, Jingyuan
name: Cai, Rongxin
name: Liang, Yilan
name: Chen, Chuanbin
name: Chen, Ban
name: Li, Chunhou
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Plant Biology

description: Additional file 39. Identification of Senkyunolide A (Cas 63038-10-8, C12H16O2, M.W. 192.25).
Cost benefit analysis (CBA) of the Sm@RT Precision Livestock Farming and Digital Technologies innovations solutions
Creators: name: McLaren, Ann
name: Morgan-Davies, Claire
name: Piirsalu, Peep
name: Keady, TWJ
name: de Boer, Anne
name: Klein, Renáta
name: McClearn, Brid
name: Grøva, Lise
name: Depuille, Laurence
name: Giovanetti, Valeria
name: Godo, Assaf
name: Kenyon, Fiona
Publisher: name: Zenodo
Year: 2024
Subjects: sheep
goats
technologies

description: This report presents the assessment of sustainability aspects on environment, society and economy, as well as welfare and data management of the solutions identified during Sm@RT. It is presented in the form of a Cost-Benefit analysis. The information contained in this report features data gathered from a variety of stakeholders involved in the small ruminant meat and dairy industries across Europe and Israel. The report summarises the cost benefit analyses completed for 30 tools and technology solutions identified during Work Package 2. Each analysis was carried out based on information available from sources such as the Digifarms, Innovative Farms and the Scientific and Technical Group in each country.
MOLECULAR BIOLOGICAL CHANGES IN A RABBIT MODEL OF VOCAL FOLD DEHYDRATION
Creators: name: Bailey, Taylor W
Publisher: name: Purdue University Graduate School
Year: 2022
Subjects: Plant cell and molecular biology
Animal cell and molecular biology
Pathology (excl. oral pathology)
Oral medicine and pathology

description: There is a considerable body of evidence suggestive that dehydration can negatively impact voice production. However, our understanding of the underlying biology and physiological changes, particularly at the molecular level, that contribute to this dysphonia are limited. Further, our ability to assess underlying changes in humans is restricted largely to post-mortem tissue or tissue resected during interventional vocal fold surgery, both of which are subject to bias in age and disease state. Here we have utilized a New Zealand white rabbit model of vocal fold dehydration to probe the in vivo molecular response to dehydration, focusing on differential gene and protein regulation. In the first study, a single 8-hour exposure to low humidity was used to induce airway surface dehydration. RNA Sequencing was used to obtain a global snapshot of differential transcriptional regulation. This informed a second study wherein 8-hour exposures to low humidity over 15 consecutive days were used and followed by LC-MS/MS proteomic analysis to interrogate potential functional changes. In the third study, systemic dehydration was induced with a 5-day water restriction protocol. A third rehydrated group was included that returned to ad libitum consumption for 3 days. LC-MS/MS proteomic analysis was used. We have found evidence for transcriptional and protein expression changes under both dehydration paradigms. Our findings serve to inform our molecular biological understanding of dehydration of the vocal folds with implications to prophylaxis against and clinical intervention thereof.
Additional file 1 of Transcriptomic and targeted metabolomic analyses provide insights into the flavonoids biosynthesis in the flowers of Lonicera macranthoides
Creators: name: Lv, Ling Ling
name: Li, Li Yun
name: Xiao, Long Qian
name: Pi, Jian Hui
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy
subject: Plant Biology

description: Supplementary Material 1
THE PRESSURES WORKING MOMS FACE PERFORMING IN THEIR CAREERS AND THEIR HOMES: CREATING AND FOSTERING RESILIENCY IN A SOCIAL MEDIA SATURATED SOCIETY
Creators: name: Butcher, Lindsay M
Publisher: name: Purdue University Graduate School
Year: 2022
Subjects: Communication studies

description: This study explores how working moms show resiliency in the age of social media; consumed by the pressures to excel in their careers and in raising their families. Fifteen self-identified working moms are interviewed about their reason(s) for working, their purpose behind their social media usage, the challenges and rewards of being a working mom, their definition and their assumption of society’s definition of what a working mom is, and how they overcome tough days. The following themes emerge: moms assessing situations, moms adjusting their daily lives, self-scrutiny, money, expectations, the influence on the children, and the gleaning of humor not hate from social media platforms. These themes are supported by participant voices and existing literature to add to research surrounding this important topic. Limitations and future directions are also discussed.
Additional file 1 of Tumor cell density dependent IL-8 secretion induces the fluctuation of tregs/CD8 + T cells infiltration in hepatocellular carcinoma: one prompt for the existence of density checkpoint
Creators: name: Yan, Mengchao
name: Yao, Jia
name: Lin, Yan
name: Yan, Jun
name: Xie, Ye
name: Fu, Zongli
name: Zhou, Yongqiang
name: Wei, Jiayun
name: Li, Xun
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 1: Table S1. Sequences for shRNA induced knockdown. Table S2. Antibodies for western blot (WB), immunohistochemistry (IHC), immunofluorescence (IF), and flow cytometry (FC). Table S3. Primers for qPCR. Table S4. Statistical analysis. Figure S1. Influence of basic characteristics of tumor on Treg/CD8+ T cell ratio. A. Comparison of Treg/CD8+ T cell ratios in different tumor number groups. B. Comparison of Treg/CD8+ T cell ratios in different pathologic grading. C. Comparison of Treg/CD8+ T cell ratio in HBsAg+ and HBsAg- group. D. Correlation between Tregs/CD8+ T cells ratio and tumor size. The data represent the mean ± S.D. Mann–Whitney U test, Kruskal-Wallis test or spearman analysis were used for statistical analysis. *P < 0.05; **P < 0.01; ***P < 0.001. Figure S2. Correlation between the expression of DAPK1 and IL-8 in HCC. A. Spearman correlation scatter plot of IL-8 and DAPK1 mRNA expression in HCC; the rho value of the spearman after purity adjustment was used as the degree of correlation. B. Expression of DAPK1 in < 5000 cells/mm2, 5000–6000 cells/mm2 and ≥ 6000 cells/mm2 groups; Image J was used for quantification; Scale bar, 20 µm. The data represent the mean ± S.D. Kruskal–Wallis test was used for statistical analysis. *P < 0.05; **P < 0.01; ***P < 0.001.
Processing Bio-Argo particle backscattering at the DAC level
Creators: name: Carval, Thierry
name: Coatanoan, Christine
name: Schmechtig, Catherine
name: Racape, Virginie
name: Rannou, Jean Philippe
name: Dobler, Delphine
Publisher: name: Ifremer
Year: 2018

description: This document does NOT address the issue of particle backscattering quality control (either real-time or delayed mode). As a preliminary step towards that goal, this document seeks to ensure that all countries deploying floats equipped with backscattering sensors document the data and metadata related to these floats properly. We produced this document in response to action item 9 from the first Bio-Argo Data Management meeting in Hyderabad (November 12-13, 2012).
If the recommendations contained herein are followed, we will end up with a more uniform set of particle backscattering data within the Bio-Argo data system, allowing users to begin analyzing not only their own particle backscattering data, but also those of others, in the true spirit of Argo data sharing.
Additional file 1 of Risk of conversion to mild cognitive impairment or dementia among subjects with amyloid and tau pathology: a systematic review and meta-analysis
Creators: name: Huszár, Zsolt
name: Engh, Marie Anne
name: Pavlekovics, Márk
name: Sato, Tomoya
name: Steenkamp, Yalea
name: Hanseeuw, Bernard
name: Terebessy, Tamás
name: Molnár, Zsolt
name: Hegyi, Péter
name: Csukly, Gábor
Publisher: name: figshare
Year: 2024
Subjects: Medicine
Cell Biology
Neuroscience
Biotechnology
Biological Sciences not elsewhere classified
Mental Health

description: Supplementary Material 1.
Fragmentation Behaviour of Plastic Litter in the Marine Environment
Creators: name: Reuwer, Ann-Katrin
Publisher: name: Universität Osnabrück
Year: 2022
Subjects: subject: marine environment
subject: plastic litter
subject: fragmentation
subject: abrasion
subject: secondary microplastic
subject: 500 - Naturwissenschaften
subject: 43.99 - Umweltforschung, Umweltschutz: Sonstiges

description: The marine environment is polluted by plastics of all forms and sizes. To reduce this serious pollution, it is important to identify its sources. This work focuses on the me-chanically induced breakdown of plastic into smaller fragments as a source of secondary microplastic, the time scale in which these microplastics are formed as well as the influ-ence of different environmental conditions like matrix conditions, collision potential or UV irradiation on the abrasion and fragmentation behaviour of plastic debris. Since a systematic investigation of parameter influence is not possible in the environ-ment, laboratory experiments were developed to simulate natural conditions such as drift on the beach or wave action in the (low tide) surf and swash zone. For this purpose, selected plastic objects (PET bottles, HDPE caps, PS cups and LDPE bags) were ex-posed to collision and/or friction forces under different conditions. Besides visual in-spection of the destruction procedure, a number of different methods was used to char-acterize the process, e.g., counting of visible fragments (larger than 350 μm), micro-scopic analysis of the surface structure (binocular, SEM) and highly resolved analysis of particle numbers in the size range below 350 μm. In order to extract microplastic parti-cles (<5 mm) from the matrix, extraction methods were developed that were adapted to the given sample properties (matrix volume). Furthermore, based on the particle num-bers, the power law model was applied to analyse the fragmentation process in the con-text of the observed particle size distributions. Plastic samples exhibited various signs of mechanical impairment in form of surface abrasion, cracks, tears, perforation, crumpling and finally fragmentation. The formation of fragments in different sizes (macro-, meso- and microplastics) was observed. The plastic objects were classified according to their degree of destruction to elucidate the effect of the different experimental conditions. Results show that fragmentation and abrasion depend on individual properties of the plastic objects such as thickness or shape and on the potential of weakening the plastic structure by mechanical forces (collisions) or chemical degradation (UV irradiation). Environmental conditions also influence the plastic damage; surface abrasion plays a major role on the beach; fragmentation will most likely happen in the surf- and in the swash zone. However, both processes occur simultaneously and interact with each oth-er. Formation of secondary microplastics was shown to be likely in the marine environ-ment; it must therefore be considered as an important process in the light of microplastic contamination.
THE RELATIONSHIP BETWEEN INSECTICIDE SUSCEPTIBILITY AND THE GUT MICROBIOME OF GERMAN COCKROACH (BLATTELLA GERMANICA L.)
Creators: name: Wolfe, Zachery M
Publisher: name: Purdue University Graduate School
Year: 2022
Subjects: Fertilisers (incl. application)

description: The objectives of this dissertation included comparing the whole gut bacterial profiles of insecticide resistant and susceptible B. germanica and determining how these profiles, as well as the structure and function of the gut microbiome, change in the presence of an antibiotic. Additional goals were to investigate how antibiotic treatment impacts the toxicity of the bait insecticides fipronil, abamectin and indoxacarb, and to determine how gut bacteria, and specifically the enzymes originating within gut bacteria, metabolize and convert ingested indoxacarb into its toxic metabolite DCJW. Findings show that pre-treatment with the antimicrobial compound kanamycin (KAN) led to reductions in resistance levels for fipronil and abamectin, but also increased basal toxicity levels in both resistant and susceptible strains tested. 16S bacterial sequence surveys revealed that resistant and susceptible cockroach strains were more similar before KAN treatment than after, with a stronger dysbiosis effect in the resistant strain. For the insecticide indoxacarb, regardless of strain, roaches treated with kanamycin-infused water in feeding bioassays were more susceptible compared to the control treatment, but in vial (surface contact) bioassays, only susceptible cockroaches experienced a significant shift in mortality. When the frass of indoxacarb-fed cockroaches was analyzed, fewer molecules of the hydrolytic metabolite DCJW were produced with the introduction of an antibiotic (KAN). This result was further corroborated by esterase activity assays of whole homogenized cockroach guts. All results considered, these findings provide novel evidence of microbe-mediated pro-insecticide activation in the cockroach gut. Overall, the results of this dissertation reveal previously unknown relationships between gut microbiota and their insect hosts. These microbiome relationships exposed important cockroach strain differences which may extend to the host population level. Furthermore, this research has connected a change in enzyme activity in the gut microbiome with indoxacarb, a very important marketplace pro-insecticide.
Renforcer la responsabilité démocratique dans l'UEM: le Parlement européen, assemblée parlementaire de la zone euro. Revue ECU/EURO, N°52 (2018)
Creators: name: Allemand, Frédéric
Publisher: name: RESuME
Year: 2018
Subjects: subject: Economic and Monetary Union
subject: Union économique et monétaire
subject: Legitimacy
subject: Légitimité
subject: European Parliament
subject: Parlement européen
subject: National Parliaments
subject: Parlements nationaux
subject: Euro Area Governance
subject: Gouvernance de la zone euro

description: L'UEM réserve depuis son établissement une place marginale à la représentation parlementaire dans sa gouvernance. Les mesures de gestion de crise adoptées à partir de 2010, puis les réformes législatives qui ont suivi (Six-Pack, Two-Pack, Union bancaire) n'ont entraîné aucune évolution significative de ce point de vue. Cependant, toute réforme nouvelle de l'UEM ne saurait se satisfaire de ce statu quo concernant les responsabilités du Parlement européen comme des parlements nationaux: un "rôle essentiel" doit être reconnu aux instances parlementaires dans l'UEM de demain, ainsi que le préconise la Commission en 2017. Une équipe interdisciplinaire menée par Thomas Piketty a proposé en ce sens la création d'une Assemblée parlementaire de la zone euro, composé d'élus du Parlement européen et des parlements nationaux. Le présent article juge louable l'initiative tout en critiquant l'intérêt.
Additional file 3 of Coffee consumption and periodontitis: a Mendelian Randomization study
Creators: name: Liao, Wan-Zhe
name: Zhou, Zhi-Yi
name: Lin, Zi-Kai
name: Xie, Shuo-Jia
name: Zheng, Ya-Fang
name: Wang, Jun-Tao
name: Zheng, Jun-Huang
name: Chen, Hao-Kai
name: Chen, Wu-Shu
name: Guo, Xu-Guang
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Additional file 3: Supplementary Table 3. Characteristics of the SNPs used for analyzing the causality from periodontitis on binary coffee consumption and the result of Mendelian Randomization in IVW, Weighted Median and MR-Egger methods. SNP, single nucleotide polymorphism; EAF, effect allele frequency; SE, standard error; IVW, inverse variance weighted.
ATTITUDE CHANGE AND TIME AS MEASURES OF EFFECTIVE EXHIBITS
Creators: name: Rollins, Jeffrey J
Publisher: name: Purdue University Graduate School
Year: 2022
Subjects: Other education not elsewhere classified

description: The first article presents a study that measured exhibit visitors' reported attitudes as measured by an early iteration of the attitudinal learning inventory (ALI) (Watson et al., 2018). The study, which was conducted at the Indiana State Fair and measured visitors’ self-reported attitude changes after visiting an exhibit about hellbender salamanders, found that 73% of survey respondents claimed they would change their behavior and 70% claimed they would tell others what they learned by visiting the exhibit. The second article presents a study that measured visitors' time spent at the exhibit to calculate holding power. Holding power was calculated by dividing the amount of time spent at the exhibit by the minimum amount of time it takes to read the text and interact with the exhibit. The holding power for the What's Bugging Belva? exhibit was favorable at .67 and is compared with exhibits with holding powers of .47 (Boisvert et al, 1995) and .69 (Peart, 1984). The third study gathered visitor data using the validated ALI and analyzed the data using the FREQ procedure (SAS 9.4). The study was conducted at the Indiana State Fair and Purdue Springfest and measured visitors’ responses to an exhibit about animal welfare. At both events, visitors had positive perceptions in the categories of cognitive and general learning, affective learning, behavioral learning, and social learning.
OTMLARDA XXI ASR BO'LAJAK PEDAGOGLARNING KASBIY IMIDJI HAMDA MAHORATI
Creators: name: Baybayeva, M.X.
name: Egamberdiyeva, Y.F.
Publisher: name: Zenodo
Year: 2025

description: Ushbu maqolada XXI asr oliy ta’lim muassasalarida bo‘lajak pedagoglarning kasbiy imidji va pedagogik mahoratini shakllantirish muammolari yoritilgan. Pedagoglarning zamonaviy jamiyat talablariga mos holda rivojlanishi, ularning kasbiy kompetensiyalari va shaxsiy fazilatlari tahlil qilingan.
Review of literature on the implementation of the MSFD to the deep Mediterranean Sea
Creators: name: Fabri, Marie-Claire
name: Brind'Amour, Anik
name: Jadaud, Angelique
name: Galgani, Francois
name: Vaz, Sandrine
name: Taviani, Marco
name: Scarcella, Giuseppe
name: Canals, Miquel
name: Sanchez, Anna
name: Grimalt, Joan
name: Galil, Bella
name: Goren, Menachem
name: Schembri, Patrick
name: Evans, Julian
name: Knittweis, Leyla
name: Cantafaro, Anna-Lucia
name: Fanelli, Emanuela
name: Carugati, Laura
name: Danovaro, Roberto
Publisher: name: Ifremer
Year: 2018

description: Summary based on the state-of-the-art for the deep Mediterranean Sea with the final aim of identifying knowledge and gaps, descriptor by descriptor (such as lack of data, indicators, thresholds). This document is an analysis of all scientific publications, national and international reports and grey literature available on the implementation of the MSFD to the deep Mediterranean Sea.
Delayed-mode quality control of dissolved oxygen concentration measured by ARGO floats in the North- Atlantic with LOCODOX - Floats deployed in 2012, 2014, 2015, 2016 and 2017
Creators: name: Gallian, Marine
name: Thierry, Virginie
Publisher: name: Ifremer
Year: 2018

description: As part of the french Equipex NAOS and European H2020 AtlantOS projects, the LOPS is in charge of (1) Implementing and maintaining an array of Argo floats equipped with oxygen sensors in the North-Atlantic Ocean; (2) Performing the quality control of the oxygen data acquired by those floats; (3) Transmitting the qualified data to the Coriolis data center To achieve the last two objectives, the LOPS has developed a Matlab tool (LOCODOX) to correct Argo Oxygen data based on reference datasets. The qualification procedure is done in different steps: (1) Correct the real-time Quality Control flag (QC) in order to put a QC=4 (bad data) to the outliers and "hooks" at the base of the profiles (generally over the first 50m of the ascending profile); (2) When necessary, add an additional pressure correction on DOXY in the form DOXYcorrpres=DOXY*( 1+coef*PRES/1000); (3) Apply the correction estimated by LOCODOX This document summarizes the quality control preformed on the floats deployed by the LOPS in the North-atlantic over the period 2012-2017 and focusses on the LOCODOX corrections. There is one document per year of deployment (2012, 2014, 2015, 2016 and 2017)
Additional file 1 of Coffee consumption and periodontitis: a Mendelian Randomization study
Creators: name: Liao, Wan-Zhe
name: Zhou, Zhi-Yi
name: Lin, Zi-Kai
name: Xie, Shuo-Jia
name: Zheng, Ya-Fang
name: Wang, Jun-Tao
name: Zheng, Jun-Huang
name: Chen, Hao-Kai
name: Chen, Wu-Shu
name: Guo, Xu-Guang
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Additional file 1: Supplementary Table 1. Characteristics of the SNPs used for analyzing the causality from binary coffee consumption on periodontitis and the result of Mendelian Randomization in IVW, Weighted Median and MR-Egger methods. SNP, single nucleotide polymorphism; EAF, effect allele frequency; SE, standard error; IVW, inverse variance weighted.
sj-docx-1-srd-10.1177_23780231211031690 – Supplemental material for Disenfranchised: How Lower Income Mothers Navigated the Social Safety Net during the COVID-19 Pandemic
Creators: name: Elliott, Sinikka
name: Satterfield, Sierra J.
name: Solorzano, G.
name: Bowen, Sarah
name: Hardison-Moody, Annie
name: Williams, Latasha
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: Sociology
subject: FOS: Sociology

description: Supplemental material, sj-docx-1-srd-10.1177_23780231211031690 for Disenfranchised: How Lower Income Mothers Navigated the Social Safety Net during the COVID-19 Pandemic by Sinikka Elliott, Sierra J. Satterfield, G. Solorzano, Sarah Bowen, Annie Hardison-Moody and Latasha Williams in Socius
Inter-comparaison des mesures de courant dans l'Atlantique Tropical
Creators: name: Habasque, Jérémie
name: Herbert, Gaelle
Publisher: name: Coriolis
Year: 2018

description: The present reports contains the results of a study designed to compare the current measurements from various sensors (ARGO floats, Drifters, Buoys sensors, ADCP) in Tropical Atlantic in order to estimate their complementarity and to analyse the seasonal cycle of surface and deep currents in the area.
description: Ce rapport présente les résultats d'une étude visant à comparer les mesures de courant réalisées par différents capteurs (flotteurs ARGO, Drifters, Bouées fixes, ADCP) dans l'Altantique Tropical afin d'estimer leur complémentarité et d'analyser le cycle saisonnier des courants de surface et de fond dans la région.
EVALUATING GENERALIZABILITY OF DEEP LEARNING NETWORKS FOR WEED IDENTIFICATION AND THEIR OPTIMIZATION FOR DEPLOYING ON EDGE DEVICE
Creators: name: Aggarwal, Varun
Publisher: name: Purdue University Graduate School
Year: 2022
Subjects: Agricultural engineering

description: Recent studies have indicated the need for agriculture automation to reduce the excessive use of herbicides, its detrimental effects on the environment, and the rise of herbicide-resistant weeds. In addition, the predicted increase in population to 9.7 billion by 2050 requires an increase in food production that cannot be met without proper weed control. At the current forefront of automation, deep learning has achieved high accuracy for weed classification and localization. Limited efforts have gone into developing and evaluating the generalizability of deep learning networks (DLN) over crop growth stages and weed heights. Further, even less work has been done for optimizing these computation-hungry DLN so that they could be deployed on lightweight edge devices for potential integration with an Unmanned Aerial System (UAS). Hence, in this research, the generalizability and deployment ability of four DLNs were evaluated for two computer vision tasks, i.e., object detection and image segmentation. For each task, the best performing network was optimized on two edge devices, namely, NVIDIA® Jetson NanoTM and NVIDIA® Xavier NXTM. Finally, studies were conducted to determine the edge devices’ frame rate for weed identification. For image segmentation, neither DeeplabV3+ nor UNet could generalize accurately for early season weed identification. For object detection, the YOLOv4 network trained on the V1 growth stage of soybean and 7.62 cm average weed height (AWH) of Palmer amaranth generalized the best with generalizability mean average precision score of 70.33 %. When optimized using tensorRT (floating-point precision of 16) on the edge devices, YOLOv4 resulted in 4.6 fps on Jetson Nano and 27.8 fps on Xavier NX, resulting in the highest fps achieved on an edge device for weed identification from UAS images. This research has resulted in developing foundational data, identifying promising deep learning-based algorithms, and evaluating edge devices that could lead to designing a real-time weed identification and UAS-based smart weed management system.
Assessment of AtlantOS impact
Creators: name: Remy, Elisabeth
Publisher: name: AtlantOs
Year: 2019

description: Assessment of the impact of AtlantOS in situ observing system for Copernicus Marine Service and seasonal prediction
description: Évaluation de l'impact du système d'observation in situ AtlantOS pour le Copernicus Marine Service et la prévision saisonnière
sj-docx-1-qjp-10.1177_17470218211048807 – Supplemental material for Evaluation of the transient hypofrontality theory in the context of exercise: A systematic review with meta-analysis
Creators: name: Jung, Myungjin
name: Ryu, Seungho
name: Kang, Minsoo
name: Javadi, Amir-Homayoun
name: Loprinzi, Paul D.
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology

description: Supplemental material, sj-docx-1-qjp-10.1177_17470218211048807 for Evaluation of the transient hypofrontality theory in the context of exercise: A systematic review with meta-analysis by Myungjin Jung, Seungho Ryu, Minsoo Kang, Amir-Homayoun Javadi and Paul D. Loprinzi in Quarterly Journal of Experimental Psychology
sj-pdf-2-aor-10.1177_00034894211051822 – Supplemental material for Evaluation of Industry Relationships Among Authors of Systematic Reviews and Meta-analyses Regarding Ménières Disease
Creators: name: Wenger, David
name: Nowlin, Ross
name: Johnson, Austin L.
name: Anderson, Michael
name: Weaver, Michael
name: Hartwell, Micah
name: Vassar, Matt
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 110315 Otorhinolaryngology
subject: FOS: Clinical medicine

description: Supplemental material, sj-pdf-2-aor-10.1177_00034894211051822 for Evaluation of Industry Relationships Among Authors of Systematic Reviews and Meta-analyses Regarding Ménières Disease by David Wenger, Ross Nowlin, Austin L. Johnson, Michael Anderson, Michael Weaver, Micah Hartwell and Matt Vassar in Annals of Otology, Rhinology & Laryngology
sj-docx-1-tan-10.1177_17562864211050027 – Supplemental material for Response to antiseizure medications in epileptic patients with malformation of cortical development
Creators: name: Chen, Wei
name: Jin, Bo
name: Aung, Thandar
name: He, Chenmin
name: Chen, Cong
name: Wang, Shan
name: Ding, Yao
name: Ding, Fang
name: Wang, Chao
name: Li, Hong
name: Jiang, Biao
name: Zheng, Zhe
name: Dai, Haibin
name: Zhu, Junming
name: Geng, Yu
name: Ding, Meiping
name: Wang, Shuang
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: Pharmacology and Pharmaceutical Sciences not elsewhere classified

description: Supplemental material, sj-docx-1-tan-10.1177_17562864211050027 for Response to antiseizure medications in epileptic patients with malformation of cortical development by Wei Chen, Bo Jin, Thandar Aung, Chenmin He, Cong Chen, Shan Wang, Yao Ding, Fang Ding, Chao Wang, Hong Li, Biao Jiang, Zhe Zheng, Haibin Dai, Junming Zhu, Yu Geng, Meiping Ding and Shuang Wang in Therapeutic Advances in Neurological Disorders
Additional file 4 of Coffee consumption and periodontitis: a Mendelian Randomization study
Creators: name: Liao, Wan-Zhe
name: Zhou, Zhi-Yi
name: Lin, Zi-Kai
name: Xie, Shuo-Jia
name: Zheng, Ya-Fang
name: Wang, Jun-Tao
name: Zheng, Jun-Huang
name: Chen, Hao-Kai
name: Chen, Wu-Shu
name: Guo, Xu-Guang
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Additional file 4: Supplementary Table 4.
Mediated Public Diplomacy and RT on Instagram: Role of International Institutions, Audience Engagement, and Online Account Bans
Creators: name: Winkler, Carol Kay
name: Massignan, Virginia
name: Damanhoury, Kareem El
name: Yachin, Mor
name: Lokmanoglu, Ayse Deniz
name: McMinimy, Kayla Denise
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Medicine
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Changes in the global media environment now challenge relationships between and within states. To expand understandings of mediated public diplomacy, this study examined 13,500 Instagram posts distributed on RT’s non-Russian accounts from September 2021–September 2022. It used LDA to identify RT topics across language accounts, explored the topics’ relation to UN statehood, examined audience engagement levels, and compared their frequency before and after major bans on RT content. The study found that more than two-thirds of the top 30 topics had direct relevance to the statehood frame. RT’s language accounts did employ unique audience-targeting strategies and situation-dependent emphases linked to the timing of their banned content, but the approaches varied according to which of the four statehood criteria were under discussion. High levels of audience engagement for statehood-related posts linked to each of the statehood definitional characteristics, but did not correspond to the frequency of the posted content. The study concludes with implications for mediated public diplomacy theory.
Capturing Changes in Combinatorial Dynamical Systems via Persistent Homology
Creators: name: Slechta, Ryan
Publisher: name: Purdue University Graduate School
Year: 2022
Subjects: Theory of computation not elsewhere classified
Computational complexity and computability
Topology
Dynamical systems in applications

description: Recent innovations in combinatorial dynamical systems permit them to be studied with algorithmic methods. One such method from topological data analysis, called persistent homology, allows one to summarize the changing homology of a sequence of simplicial complexes. This dissertation explicates three methods for capturing and summarizing changes in combinatorial dynamical systems through the lens of persistent homology. The first places the Conley index in the persistent homology setting. This permits one to capture the persistence of salient features of a combinatorial dynamical system. The second shows how to capture changes in combinatorial dynamical systems at different resolutions by computing the persistence of the Conley-Morse graph. Finally, the third places Conley's notion of continuation in the combinatorial setting and permits the tracking of isolated invariant sets across a sequence of combinatorial dynamical systems.
title: Enhancing Machine Learning Assurance with Portend
Creators: name: Hansen, Jeffrey
name: Echeverría, Sebastián
name: Pons, Lena
name: Moreno, Gabriel
name: Lewis, Grace
name: Zhan, Lihan
Publisher: name: Software Engineering Institute
publisherIdentifier: https://ror.org/01xqjjn94
publisherIdentifierScheme: ROR
Year: 2025

description: Data drift occurs when machine learning (ML) models are deployed in environments that no longer resemble the data on which they were trained. As a result of this change, model performance can deteriorate. In this blog post from the Software Engineering Institute (SEI) at Carnegie Mellon University, we introduce Portend, a new open source toolset from the SEI that simulates data drift in ML models and identifies the proper metrics to detect drift in production environments. Portend can also produce alerts if it detects drift, enabling users to take corrective action and enhance ML assurance. This post explains the toolset architecture and illustrates an example use case.
Additional file 2 of Coffee consumption and periodontitis: a Mendelian Randomization study
Creators: name: Liao, Wan-Zhe
name: Zhou, Zhi-Yi
name: Lin, Zi-Kai
name: Xie, Shuo-Jia
name: Zheng, Ya-Fang
name: Wang, Jun-Tao
name: Zheng, Jun-Huang
name: Chen, Hao-Kai
name: Chen, Wu-Shu
name: Guo, Xu-Guang
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Additional file 2: Supplementary Table 2. Characteristics of the SNPs used for analyzing the causality from periodontitis on continuous coffee consumption and the result of Mendelian Randomization in IVW, Weighted Median and MR-Egger methods. SNP, single nucleotide polymorphism; EAF, effect allele frequency; SE, standard error; IVW, inverse variance weighted.
Ritual Reinforcement: Habit, Emotion, and Identity as Attributes of Trust in News
Creators: name: Arguedas, Amy Ross
name: Mont’Alverne, Camila
name: Toff, Benjamin
name: Fletcher, Richard
name: Nielsen, Rasmus Kleis
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Theory and research about trust in news typically draws on normative understandings of news as a conduit for information transmission in the service of the media’s role as the Fourth Estate in democratic systems. These approaches rely on a narrow top-down view of trust, and of how and why people use news in their daily lives. In this study, we offer a complementary audience-centric view of trust in news, which foregrounds three attributes beyond politics and professional practice, closer to Carey’s formulation of communication as ritual, which we argue is better aligned with how much of the public engages with news. Our qualitative analysis of focus groups and interviews in Brazil, India, the United Kingdom, and the United States identifies three attributes of trust in news that extend beyond the transmission view of communication—specifically those pertaining to habit, emotion, and identity. These findings show the importance of considering how trust operates through sociocultural levels sometimes in tandem with, but in other ways orthogonal to, political factors. We posit that journalists and reformer-advocates for journalism seeking effective strategies for rebuilding trust may need to look beyond politics and the professional practices in the industry to do so.
Argo Core and BGC merged profiles file processing and format on Coriolis GDAC
Creators: name: Coriolis Argo Data Management Team,
Publisher: name: Ifremer
Year: 2018

description: In 2014, Argo data management team decided to split core-Argo profiles and non-core-Argo profiles into two distinct profile files (C-File and B-File).
Both files have the same N_PROF dimension and, for each N_PROF, pressure values of the C-file are duplicated into the B-File.
A core-Argo profile file (C-File) contains the Core parameters provided by a float: pressure, temperature, salinity and conductivity.
The additional parameters are managed in a BGC-Argo data file (B-File). Two types of additional parameters are concerned: ‘intermediate’ parameters (provided by the float sensors) and BGC parameters (directly sampled by the float sensors or computed, at the DAC level, from Core and ‘intermediate’ parameters).
For a given float cycle and direction, the merged profile combines into one merged file (M-File) the Core and the BGC parameters. The M-File is generated by the GDAC, from the C-File and B-File provided by the DACs.
M-profile version 1
In version 1, the M-Profile is created from a concatenation of Core and BGC parameters (i.e. ‘intermediate’ parameters are ignored) along the common PRES axis of each N_PROF. Thus M-profile file has the same number of N_PROF arrays as the original C-File and B-File.
M-profile version 2
In version 2, the M-Profile is the merging of all N_PROF arrays of M-Profile version 1 into a single one.
Thus, in such M-Profile file:
	- N_PROF = 1
	- N_PARAM is equal to the number of Core and BGC parameters
The standard Argo profile structure is still used in M-Profile file: measurements are stored in a(N_PROF, N_LEVELS) array. However, as N_PROF = 1, we can consider that measurements are reported in a simple “matrix” of N_PARAM * N_LEVELS dimension: one column for each Core and BGC parameter, one level for each valid distinct pressure. The PRES vertical synthetic axis contains the sorted set of all valid distinct pressures. A valid pressure has a QC flag of ‘1’, ‘2’, ‘5’ or ‘8’ (‘good’, ‘probably good’, ‘changed’ or ‘estimated’ value). The number of valid distinct pressures is equal to N_LEVELS.
Each parameter value having a non-valid pressure is ignored.
A pressure value may have more than one value for a parameter (for example, BGC sensors may report specific Core parameter values that has been used to compute reported BGC parameter values). If the parameter is a Core-parameter, the value of the Core profile is selected. Otherwise, the first value of an ordered set (see “N_PROF priority” below) of the original N_PROF arrays is selected.
This document details the processing steps used to generate version 2 of merged profile data from Argo profile data. It also describes the format of the NetCDF files produced by the Coriolis GDAC to store these merged profile data.
sj-pdf-1-pss-10.1177_09567976211012676 – Supplemental material for Inhibitory Cognitive Control Allows Automated Advice to Improve Accuracy While Minimizing Misuse
Creators: name: Strickland, Luke
name: Heathcote, Andrew
name: Bowden, Vanessa K.
name: Boag, Russell J.
name: Wilson, Michael David
name: Khan, Samha
name: Loft, Shayne
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 110904 Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: 110319 Psychiatry (incl. Psychotherapy)
subject: Neuroscience

description: Supplemental material, sj-pdf-1-pss-10.1177_09567976211012676 for Inhibitory Cognitive Control Allows Automated Advice to Improve Accuracy While Minimizing Misuse by Luke Strickland, Andrew Heathcote, Vanessa K. Bowden, Russell J. Boag, Michael David Wilson, Samha Khan and Shayne Loft in Psychological Science
Signal Processing Methods for the Analysis of the Electrocardiogram
Creators: name: Lenis, Gustavo
Publisher: name: Karlsruhe
Year: 2017
Subjects: Electrocardiogram
ECG
Signal Processing

description: Das Elektrokardiogramm (EKG) zeichnet die elektrische Aktivität des Herzens auf der Brust- oberfläche auf. Dieses Signal kann einfach und kostengünstig aufgenommen werden und wird daher in einer Vielzahl von mobilen und stationären Anwendungen genutzt. Es ist über die letzten 100 Jahre zum Goldstandard bei der Diagnose vieler kardiologischer Krankheiten geworden. Herzerkrankungen bleiben ein relevantes Thema in unserer Gesellschaft, da sie zu 30 % aller Todesfälle weltweit führen. Allein die koronare Herzkrankheit ist die häufigste Todesursache überhaupt. Weiterhin sind 2 bis 3 % der Europäer von Herzrhythmusstörungen wie Vorhofflimmern und Vorhofflattern betroffen. Die damit verbundenen geschätzten Kosten in der Europäischen Union belaufen sich auf 26 Milliarden Euro pro Jahr. In allen diesen Fällen ist die Aufzeichnung des EKGs der erste unumgängliche Schritt für eine verlässliche Diagnose und erfolgreiche Therapie.
Im Rahmen dieser Dissertation wurden eine Reihe von Algorithmen zur Signalver- arbeitung des EKG entwickelt, die automatisch die rhythmischen und morphologischen Eigenschaften aus dem EKG extrahieren und dadurch den diagnostischen Prozess und die Entscheidungsfindung des Arztes unterstützen. In einem ersten Projekt wurde das Phänomen der postextrasystolischen T-Wellen-Änderung (PEST) untersucht. Die aus der PEST ex- trahierten Biomarker haben wir als Prädiktoren für Herzversagen postuliert. Ein zweites Projekt handelte vom Entwurf eines akkuraten Algorithmus zur Detektion und Annotation der P-Welle im EKG. Als Referenz während der Entwicklung wurden intrakardial gemessene Signale verwendet. Eine dritte Untersuchg hatte das Ziel, das physiologische Phänomen der respiratorischen Sinusarrhythmie (RSA) besser zu verstehen. In diesem Projekt wurde ein Algorithmus zur Trennung der Herzratenvariabilität (HRV) in ihre atmungsabhängige und ihre atmungsunabhn ̈gige Komponente untersucht. Letzterer Anteil der HRV könnte neue Erkenntnisse über die Regulationsmechanismen des kardiovaskulären Systems liefern. In der vierten und letzten Studie wurde der Einfluss mentaler Belastung auf das EKG während der Autofahrt untersucht. Eine Vielzahl von Deskriptoren wurden gefunden, die eine gefährliche mentale Beanspruchung detektieren und somit den Fahrer vor einem möglichen Unfall schützen können.
Wir schließen aus diesen Untersuchungen, dass gut entwickelte Methoden der Signalver- arbeitung des EKG das Potential haben, die Belastung der Patienten, die an Herzerkrankungen leiden, und die Anzahl der Verkehrsunfälle zu reduzieren.
sj-docx-1-nmi-10.1177_11786388211047056 – Supplemental material for Rural and Urban Correlates of Stunting Among Under-Five Children in Sierra Leone: A 2019 Nationwide Cross-Sectional Survey
Creators: name: Sserwanja, Quraish
name: Kamara, Kassim
name: Mutisya, Linet M
name: Musaba, Milton W
name: Ziaei, Shirin
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 111199 Nutrition and Dietetics not elsewhere classified
subject: FOS: Health sciences

description: Supplemental material, sj-docx-1-nmi-10.1177_11786388211047056 for Rural and Urban Correlates of Stunting Among Under-Five Children in Sierra Leone: A 2019 Nationwide Cross-Sectional Survey by Quraish Sserwanja, Kassim Kamara, Linet M Mutisya, Milton W Musaba and Shirin Ziaei in Nutrition and Metabolic Insights
sj-pdf-1-cjk-10.1177_20543581211046077 – Supplemental material for A Randomized Controlled Trial of Comparative Efficacy between Sodium Bicarbonate and Heparin as A Locking Solution for Tunneled Central Venous Catheters Among Patients Requiring Maintenance Hemodialysis
Creators: name: Wathanavasin, Wannasit
name: Phannajit, Jeerath
name: Poosoonthornsri, Manorom
name: Lewsuwan, Songkiat
name: Tanateerapong, Patchara
name: Chongthanakorn, Kamonrat
name: Takkavatakarn, Kullaya
name: Katavetin, Pisut
name: Tiranathanagul, Khajohn
name: Eiam-ong, Somchai
name: Susantitaphong, Paweena
Publisher: name: SAGE Journals
Year: 2021
Subjects: Medicine

description: Supplemental material, sj-pdf-1-cjk-10.1177_20543581211046077 for A Randomized Controlled Trial of Comparative Efficacy between Sodium Bicarbonate and Heparin as A Locking Solution for Tunneled Central Venous Catheters Among Patients Requiring Maintenance Hemodialysis by Wannasit Wathanavasin, Jeerath Phannajit, Manorom Poosoonthornsri, Songkiat Lewsuwan, Patchara Tanateerapong, Kamonrat Chongthanakorn, Kullaya Takkavatakarn, Pisut Katavetin, Khajohn Tiranathanagul, Somchai Eiam-ong and Paweena Susantitaphong in Canadian Journal of Kidney Health and Disease
sj-docx-1-sms-10.1177_20563051211048413 – Supplemental material for Polarization Over Vaccination: Ideological Differences in Twitter Expression About COVID-19 Vaccine Favorability and Specific Hesitancy Concerns
Creators: name: Jiang, Xiaoya
name: Su, Min-Hsin
name: Hwang, Juwon
name: Lian, Ruixue
name: Brauer, Markus
name: Kim, Sunghak
name: Shah, Dhavan
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 200199 Communication and Media Studies not elsewhere classified
subject: FOS: Media and communications

description: Supplemental material, sj-docx-1-sms-10.1177_20563051211048413 for Polarization Over Vaccination: Ideological Differences in Twitter Expression About COVID-19 Vaccine Favorability and Specific Hesitancy Concerns by Xiaoya Jiang, Min-Hsin Su, Juwon Hwang, Ruixue Lian, Markus Brauer, Sunghak Kim and Dhavan Shah in Social Media + Society