cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Polarization of the D0 ground state in Quantum Mechanics and Supergravity
Creators: name: Marolf, Donald
name: Silva, Pedro J.
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The presence of a distant D4-brane is used to further investigate the duality between M-theory and D0-brane quantum mechanics. Although the D4-brane background fields are not strong enough to induce a classical dielectric effect in the D0 system, a polarization of the quantum mechanical ground state does result. A similar deformation arises for the bubble of normal space found near D0-branes in classical supergravity solutions. These deformations are compared and are shown to have the same structure in each case. Brief comments are included on the relation of D0-branes in this background to D0-branes as instantons in the D4-brane field theory and an appendix addresses certain infrared issues associated with 't Hooft scaling in 0+1 dimensions.
description: 27 pages, 1 figure, new reference add, minor change on footnote 3, not apperaing on published edition
Do SNAP Recipients Get the Best Prices?
Creators: name: March, Raymond J.
name: Lyford, Conrad P.
name: Carpio, Carlos E.
name: Boonsaeng, Tullaya
name: March, Raymond J.
name: Lyford, Conrad P.
name: Carpio, Carlos E.
name: Boonsaeng, Tullaya
Publisher: name: Unknown
Year: 2016
Subjects: Agricultural and Food Policy
Food Consumption/Nutrition/Food Safety
Food Security and Poverty
Health Economics and Policy

description: This paper examines the relationship between SNAP participation and prices paid for food items. To test this relationship, we develop an expensiveness index following the method of Aguiar and Hurst (2007) and use the FoodAPS data set. Using the ordinary least squares method and controlling for endogeneity using the Lewbel (2010) method, we found SNAP participation did not hold a statistically significant relationship with the prices paid for food items when we controlled for consumer behavior and food market variables. This indicates that SNAP participants are not systematically disadvantaged in their food purchases. Additional efforts to further educate SNAP participants of effective shopping and budgeting habits may be fruitful in helping households pay comparatively lower food prices.
Additional file 2 of Developmental trajectories of eating disorder symptoms: A longitudinal study from early adolescence to young adulthood
Creators: name: Breton, Édith
name: Dufour, Rachel
name: Côté, Sylvana M.
name: Dubois, Lise
name: Vitaro, Frank
name: Boivin, Michel
name: Tremblay, Richard E.
name: Booij, Linda
Publisher: name: figshare
Year: 2022
Subjects: Neuroscience
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Science Policy
Mental Health

description: Additional file 2. Eating disorder symptom level trajectories from 12 to 20 years, including both sex (without the weight loss item).
Tourism, Natural Resource Use and Livelihoods in Developing Countries: A Bioeconomic General Equilibrium Approach
Creators: name: Gilliland, Ted E.
name: Sanchirico, James N.
name: Taylor, J. Edward
name: Gilliland, Ted E.
name: Sanchirico, James N.
name: Taylor, J. Edward
Publisher: name: Unknown
Year: 2016
Subjects: subject: Food Security and Poverty
subject: International Development
subject: Resource /Energy Economics and Policy
subject: Natural resources
subject: Fisheries
subject: Poverty
subject: Tourism
subject: FOS: Economics and business
subject: Bioeconomic models
subject: CGE

description: Protecting degraded open-access natural resources while maintaining or improving individuals’ livelihoods is a major challenge, particularly in developing countries. Tourism is often viewed as a win-win solution that can shift natural resource users away from resource extraction and increase local incomes. Existing studies examining the impacts of tourism on natural resource use and livelihoods fail to account for the full suite of effects tourism has on local economies. We offer a new method for assessing the impacts of tourism growth by combining local economy-wide impact evaluation (LEWIE) techniques from development economics with bioeconomic modeling techniques from natural resource economics. We construct our “Bio-LEWIE” model using a novel data set of microeconomic and biological data from the western Philippines. We simulate the impact of a 10 percent increase in tourism expenditures on fishing pressure and local incomes for different socioeconomic groups (e.g., poor households versus nonpoor households). We find that if fish cannot be traded with outside markets, fishing pressure increases and the fish stock declines. The growth in tourism causes households’ real incomes to increase, however they decrease slightly over time due to the decline in the fish stock. In contrast, if fish can be imported, fishing pressure decreases and the fish stock recovers. Real incomes also increase in this scenario, including a small growth in real incomes over time as the fish stock recovers. However importing fish results in smaller overall gains in real incomes (particularly for fishing households), which is due to a leakage of money out of the local economy via fish imports. This model predicts the costs and benefits of tourism growth, when they will occur, and for whom. This framework can help policy-makers in the developing world find synergies between natural resource protection, sustainable livelihoods, and economic growth.
Additional file 2 of Protocol for a multicenter randomized controlled trial comparing a non-opioid prescription to the standard of care for pain control following arthroscopic knee and shoulder surgery
Creators: name: Gazendam, Aaron
name: Seper Ekhtiari
name: Horner, Nolan S.
name: Simunovic, Nicole
name: Duong, Andrew
name: De Sa, Darren
name: Peterson, Devin
name: Denkers, Matthew
name: Vickas Khanna
name: Adili, Anthony
name: Jaydeep Moro
name: Khan, Moin
name: Olufemi R. Ayeni
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 2. Study Developed Questionnaire.
Water in the Balance: The Impact of Water Infrastructure on Agricultural Adaptation to Rainfall Shocks in India
Creators: name: Zaveri, Esha
name: Wrenn, Douglas H.
name: Fisher-Vanden, Karen
name: Zaveri, Esha
name: Wrenn, Douglas H.
name: Fisher-Vanden, Karen
Publisher: name: Unknown
Year: 2016
Subjects: subject: Agricultural and Food Policy
subject: Environmental Economics and Policy
subject: Water infrastructure
subject: Adaptation
subject: Agriculture
subject: Irrigation
subject: Indian Monsoon

description: Investments in water infrastructure remain key to climate change adaptation plans in many countries, and rank high in adaptation costs for developing countries (Narain et al., 2011). In this paper, we use district-level panel data from 1970-2005 across India’s major agricultural states to investigate the role played by subsidized access to electricity, groundwater wells, tank and dam projects in mediating the vulnerabilities associated with monsoonal variation. We focus on wheat, a staple of India’s food supply, as it requires irrigation and represents a significant portion of India’s total agricultural output. Results show that the impact of negative precipitation shocks is significantly dampened when a particular district has access to a more reliable source of irrigation – e.g., access to tubewells helps to dampen the impact of negative precipitation shocks on irrigation decisions associated with wheat, while upstream dams do not significantly contribute to this dampening effect. In contrast, having access to dugwells exacerbates the impact of a fall in monsoon precipitation curtailing irrigation of wheat. Our results suggest that historical agricultural policies that increased access to tubewells and the subsequent electrification of regions naturally endowed with more groundwater have equipped farmers with the ability to withstand monsoonal shocks and fluctuations.
Continuous Execution of Discrete Action Plan Features
Creators: name: Mocke, Viola
Publisher: name: Open Science Framework
Year: 2022
Subjects: subject: Experimental Analysis of Behavior
subject: Cognitive Psychology
subject: Cognition and Perception
subject: Social and Behavioral Sciences
subject: Psychology
subject: FOS: Psychology

description: This task will run online and will be performed by using a computer mouse and screen. Cursor movements will be tracked and analysed. Participants will see a round starting area at the bottom of their screen as well as a target area (a horizontal bar) on the top of the screen In each trial, participants start with their cursor in the starting area, in which stimulus A appears first, according to which they plan action A. Before executing action A, participants must attend a second stimulus B appearing in the starting area. The corresponding action B must be executed directly after stimulus B offset (cursor moved to target and returned to starting area), followed by the initially planned action A (cursor moved to target and returned to starting area, where the stimuli for the next trial will appear again). Required actions can be 1) a short left click, 2) a long left click, 3) a short right click and 4) a long right click. Left (right) means that participants should click anywhere on the left (right) half of the target area and short (long) means they need to click for 0-200 ms (200-500 ms) without moving their cursor during the click.
Designing Aqueous Organic Electrolytes for Zinc-Air Batteries: Method, Simulation, and Validation
Creators: name: Clark, Simon
name: Mainar, Aroa R.
name: Iruin, Elena
name: Colmenares, Luis C.
name: Blázquez, J. Alberto
name: Tolchard, Julian R.
name: Jusys, Zenonas
name: Horstmann, Birger
Publisher: name: arXiv
Year: 2019
Subjects: subject: Chemical Physics (physics.chem-ph)
subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences

description: Aqueous zinc-air batteries (ZABs) are a low-cost, safe, and sustainable technology for stationary energy storage. ZABs with pH-buffered near-neutral electrolytes have the potential for longer lifetime compared to traditional alkaline ZABs due to the slower absorption of carbonates at non-alkaline pH values. However, existing near-neutral electrolytes often contain halide salts, which are corrosive and threaten the precipitation of ZnO as the dominant discharge product. This paper presents a method for designing halide-free aqueous ZAB electrolytes using thermodynamic descriptors to computationally screen components. The dynamic performance of a ZAB with one possible halide-free aqueous electrolyte based on organic salts is simulated using an advanced method of continuum modeling, and the results are validated by experiments. XRD, SEM, and EDS measurements of Zn electrodes show that ZnO is the dominant discharge product, and operando pH measurements confirm the stability of the electrolyte pH during cell cycling. Long-term full cell cycling tests are performed, and RRDE measurements elucidate the mechanism of ORR and OER. Our analysis shows that aqueous electrolytes containing organic salts could be a promising field of research for zinc-based batteries, due to their Zn$^{2+}$ chelating and pH buffering properties. We discuss the remaining challenges including the electrochemical stability of the electrolyte components.
description: 16 pages, 12 figures
On the instability of 3d null singularities
Creators: name: Lawrence, Albion
Publisher: name: arXiv
Year: 2002
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: String propagation on a three-dimensional Lorentzian string orbifold with a null singularity has been studied by Horowitz and Steif, and more recently by Liu, Moore and Seiberg. We analyze the target space as a classical gravitational background. The singularity becomes spacelike when an arbitrarily small amount of matter is thrown at the singularity. This can be seen directly by studying the null singularity as a limit of the M=0, J=0 BTZ black hole metric.
description: 9 pages, uses harvmac.tex. v2: minor wording changes in introduction, fixed reference typo, new references
Additional file 2 of STING protects against cardiac dysfunction and remodelling by blocking autophagy
Creators: name: Xiong, Rui
name: Li, Ning
name: Chen, Lei
name: Wang, Wei
name: Wang, Bo
name: Jiang, Wenyang
name: Geng, Qing
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Science Policy
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Additional file 1. STING overexpression inhibited LC3B expression in vitro and STING phosphorylates ULK1 in an AMPK/mTOR-independent manner.
A new bifurcation in the Universe
Creators: name: Hartmann, A. E. S.
name: Novello, M.
Publisher: name: arXiv
Year: 2019
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We show that the combined system of general relativity with a non minimally coupled electromagnetic field presents a bifurcation in a cosmical framework driven by a cosmological constant. In the same framework we show the existence of states such that the resulting combined energy (the sum of the minimally and the non minimally coupled energy momentum tensor of the electromagnetic field) vanishes in a sort of violation of the action-reaction principle.
description: 10 pages, 4 figures
Additional file 3 of Protocol for a multicenter randomized controlled trial comparing a non-opioid prescription to the standard of care for pain control following arthroscopic knee and shoulder surgery
Creators: name: Gazendam, Aaron
name: Seper Ekhtiari
name: Horner, Nolan S.
name: Simunovic, Nicole
name: Duong, Andrew
name: De Sa, Darren
name: Peterson, Devin
name: Denkers, Matthew
name: Vickas Khanna
name: Adili, Anthony
name: Jaydeep Moro
name: Khan, Moin
name: Olufemi R. Ayeni
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 3. Consent Form.
Listronotus hoodi
Creators: name: Morrone, Juan J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Listronotus
Listronotus hoodi

description: Listronotus hoodi (Stockton, 1963)
 Hyperodes hoodi Stockton, 1963: 144 (type locality: “British America”; type material: H: USNM).
 Listronotus hoodi; O’Brien and Wibmer, 1982: 69.
 Distribution. USA (O’Brien and Wibmer, 1982).
description: Published as part of Morrone, Juan J., 2011, Annotated checklist of the tribe Listroderini (Coleoptera: Curculionidae: Cyclominae) 3119, pp. 1-68 in Zootaxa 3119 (1) on page 40, DOI: 10.11646/zootaxa.3119.1.1, http://zenodo.org/record/5246257
MOESM2 of Early-life DNA methylation profiles are indicative of age-related transcriptome changes
Creators: name: Niran Hadad
name: Masser, Dustin
name: Blanco-Berdugo, Laura
name: Stanford, David
name: Freeman, Willard
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Physiology
subject: Cancer
subject: Plant Biology

description: Additional file 2: Figure S2. Global DNA methylation levels measures using WGBS. A) Box plots of whole-genome methylation in young and old males and females. Box plots showing the methylation levels of cytosines mapped to all transposable element regions (B) or to specific transposable element families. Long interspersed nuclear repeats, LINEs (C), small interspersed nuclear repeats, SINEs (D), DNA transposons (E), and long terminal repeats, LTRs (F), n = 3/group.
Mapping thermal conductivity across bamboo cell walls with scanning thermal microscopy
Creators: name: Shah, Darshil U.
name: Konnerth, Johannes
name: Ramage, Michael H.
name: Gusenbauer, Claudia
Publisher: name: Apollo - University of Cambridge Repository
Year: 2019
Subjects: Article
/631/449
/639/301/1023/1025
/639/301/54
article

description: Funder: Leverhulme Trust; doi: https://doi.org/10.13039/501100000275
description: Funder: Lower Austrian Research and Education Society NFB (Project No. SC16-00)
description: Abstract: Scanning thermal microscopy is a powerful tool for investigating biological materials and structures like bamboo and its cell walls. Alongside nanoscale topographical information, the technique reveals local variations in thermal conductivity of this elegant natural material. We observe that at the tissue scale, fibre cells in the scattered vascular tissue would offer preferential pathways for heat transport due to their higher conductivities in both anatomical directions, in comparison to parenchymatic cells in ground tissue. In addition, the transverse orientation offers more resistance to heat flow. Furthermore, we observe each fibre cell to compose of up to ten layers, with alternating thick and thin lamellae in the secondary wall. Notably, we find the thin lamellae to have relatively lower conductivity than the thick lamellae in the fibre direction. This is due to the distinct orientation of cellulose microfibrils within the cell wall layers, and that cellulose microfibrils are highly anisotropic and have higher conductivity along their lengths. Microfibrils in the thick lamellae are oriented almost parallel to the fibre cell axis, while microfibrils in the thin lamellae are oriented almost perpendicular to the cell axis. Bamboo grasses have evolved to rapidly deposit this combination of thick and thin layers, like a polymer composite laminate or cross-laminated timber, for combination of axial and transverse stiffness and strength. However, this architecture is found to have interesting implications on thermal transport in bamboo, which is relevant for the application of engineered bamboo in buildings. We further conclude that scanning thermal microscopy may be a useful technique in plant science research, including for phenotyping studies.
Additional file 3: of Implementation strategies, and barriers and facilitators for implementation of physical activity at work: a scoping review
Creators: name: Garne-Dalgaard, Anne
name: Mann, Stephanie
name: Bredahl, Thomas
name: Stochkendahl, Mette
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Overview of the TDF coding. Total number of identified factors and results of TDF coding for the included studies. (DOCX 17 kb)
Inner-shell 1s - 2p Soft X-ray Absorption Lines
Creators: name: Behar, Ehud
name: Netzer, Hagai
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: The HULLAC atomic code is used to compute wavelengths and oscillator strengths for the 1s - np inner-shell absorption lines in Li-like to F-like ions of neon, magnesium, aluminum, silicon, sulfur, argon, calcium, and iron. Many of these lines are expected to be observed in Chandra and XMM-Newton high-resolution X-ray spectra of active galaxies. The new atomic data are incorporated in the ION code for spectral modeling of photoionized plasmas. The calculated spectra are subsequently compared with the spectrum of NGC 3783 and show very good agreement. The usefulness of these lines as diagnostics for the ionization state, column densities, and velocities in line-of-sight photoionized gas is called attention to.
description: Scheduled for the v570 n1 ApJ May 1, 2002 issue
MOESM1 of Effect of artemisinin and neurectomy of pterygoid canal in ovalbumin-induced allergic rhinitis mouse model
Creators: name: Li, Jian
name: Wang, Bin
name: Luo, Yingying
name: Bian, Yajie
name: Wang, Ruipei
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Science Policy

description: Additional file 1: Figure S1. Infiltration of eosinophils (Red arrows) in nasal mucosa (under 100 times). (A) Representative histochemical photographs of the mice with different treatments as indicated. (B) Statistical histogram of panel A. #Indicated p>0.05, *indicated p<0.05. Figure S2. Effects of artemisinin on the serum levels of IL-4 and IL-5 in OVA-sensitized mice. Serum was collected after the sacrifice of the mice. The levels of IL-4 (A) and IL-5 (B) in the serum of different group as indicated were measured by ELISA. #Indicated p>0.05, *indicated p<0.05, ***indicated p<0.001. Figure S3. Effects of artemisinin on the mRNA levels of inflammatory factors in local lymph nodes. The levels mRNA of the inflammatory factors such as TNF-α (A), INF-γ (B), IL-1β (C) and IL-10 (D) in local lymph nodes were measured by RT-qPCR in the mice with different treatments as indicated. #Indicated p>0.05, *indicated p<0.05, **indicated p<0.01.
U(2)-like Flavor Symmetries and Approximate Bimaximal Neutrino Mixing
Creators: name: Aranda, Alfredo
name: Carone, Christopher D.
name: Meade, Patrick
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Models involving a U(2) flavor symmetry, or any of a number of its non-Abelian discrete subgroups, can explain the observed hierarchy of charged fermion masses and CKM angles. It is known that a large neutrino mixing angle connecting second and third generation fields may arise via the seesaw mechanism in these models, without a fine tuning of parameters. Here we show that it is possible to obtain approximate bimaximal mixing in a class of models with U(2)-like Yukawa textures. We find a minimal form for Dirac and Majorana neutrino mass matrices that leads to two large mixing angles, and show that our result can quantitatively explain atmospheric neutrino oscillations while accommodating the favored, large angle MSW solution to the solar neutrino problem. We demonstrate that these textures can arise in models by presenting a number of explicit examples.
description: 20 pages RevTex4, 2 figures
Listronotus hubbardi
Creators: name: Morrone, Juan J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Listronotus
Listronotus hubbardi

description: Listronotus hubbardi (LeConte, 1876)
 Anchodemus hubbardi LeConte, 1876: 181 (type locality: USA: Michigan Detroit; type material: H: MCZ). Lixellus hubbardi; O’Brien and Wibmer, 1982: 71.
 Listronotus hubbardi; Morrone et al., 1995: 111.
 Distribution. USA (O’Brien and Wibmer, 1982).
description: Published as part of Morrone, Juan J., 2011, Annotated checklist of the tribe Listroderini (Coleoptera: Curculionidae: Cyclominae) 3119, pp. 1-68 in Zootaxa 3119 (1) on page 40, DOI: 10.11646/zootaxa.3119.1.1, http://zenodo.org/record/5246257
On generating random Gaussian graphical models
Creators: name: Córdoba, Irene
name: Varando, Gherardo
name: Bielza, Concha
name: Larrañaga, Pedro
Publisher: name: arXiv
Year: 2019
Subjects: subject: Methodology (stat.ME)
subject: FOS: Computer and information sciences

description: Structure learning methods for covariance and concentration graphs are often validated on synthetic models, usually obtained by randomly generating: (i) an undirected graph, and (ii) a compatible symmetric positive definite (SPD) matrix. In order to ensure positive definiteness in (ii), a dominant diagonal is usually imposed. In this work we investigate different methods to generate random symmetric positive definite matrices with undirected graphical constraints. We show that if the graph is chordal it is possible to sample uniformly from the set of correlation matrices compatible with the graph, while for general undirected graphs we rely on a partial orthogonalization method.
description: Improved figures, algorithm descriptions and text exposition. arXiv admin note: substantial text overlap with arXiv:1807.03090
Additional file 4 of Protocol for a multicenter randomized controlled trial comparing a non-opioid prescription to the standard of care for pain control following arthroscopic knee and shoulder surgery
Creators: name: Gazendam, Aaron
name: Seper Ekhtiari
name: Horner, Nolan S.
name: Simunovic, Nicole
name: Duong, Andrew
name: De Sa, Darren
name: Peterson, Devin
name: Denkers, Matthew
name: Vickas Khanna
name: Adili, Anthony
name: Jaydeep Moro
name: Khan, Moin
name: Olufemi R. Ayeni
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 4. Infographic.
Additional file 1: of Unmanned aerial vehicles: potential tools for use in zoonosis control
Creators: name: Yu, Qing
name: Liu, Hui
name: Xiao, Ning
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Chemical Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology

description: Multilingual abstracts in the five official working languages of the United Nations. (PDF 212Â kb)
The Firre locus produces a trans -acting RNA molecule that functions in hematopoiesis
Creators: name: Lewandowski, Jordan P.
name: Lee, James C.
name: Hwang, Taeyoung
name: Sunwoo, Hongjae
name: Goldstein, Jill M.
name: Groff, Abigail F.
name: Chang, Nydia P.
name: Mallard, William
name: Williams, Adam
name: Henao-Meija, Jorge
name: Flavell, Richard A.
name: Lee, Jeannie T.
name: Gerhardinger, Chiara
name: Wagers, Amy J.
name: Rinn, John L.
Publisher: name: Apollo - University of Cambridge Repository
Year: 2019
Subjects: Article
/631/136/532
/631/208/199
/631/250/127
/631/250/232/2058
/631/337/384/2568
/45/91
/64/60
/49/31
/38/91
/14/32
/13/21
article

description: Abstract: RNA has been classically known to play central roles in biology, including maintaining telomeres, protein synthesis, and in sex chromosome compensation. While thousands of long noncoding RNAs (lncRNAs) have been identified, attributing RNA-based roles to lncRNA loci requires assessing whether phenotype(s) could be due to DNA regulatory elements, transcription, or the lncRNA. Here, we use the conserved X chromosome lncRNA locus Firre, as a model to discriminate between DNA- and RNA-mediated effects in vivo. We demonstrate that (i) Firre mutant mice have cell-specific hematopoietic phenotypes, and (ii) upon exposure to lipopolysaccharide, mice overexpressing Firre exhibit increased levels of pro-inflammatory cytokines and impaired survival. (iii) Deletion of Firre does not result in changes in local gene expression, but rather in changes on autosomes that can be rescued by expression of transgenic Firre RNA. Together, our results provide genetic evidence that the Firre locus produces a trans-acting lncRNA that has physiological roles in hematopoiesis.
Cavity-mediated dissipative spin-spin coupling
Creators: name: Grigoryan, Vahram L.
name: Xia, Ke
Publisher: name: arXiv
Year: 2019
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We study dissipative spin-spin coupling in dispersive regime mediated by virtual photons in a microwave cavity. Dissipative coupling between magnetization of each magnetic material and the cavity photons is established by means of two phase shifted driving forces acting on each magnetization. We show that when only one of the magnetization is dissipatively coupled to the cavity, the cavity-mediated spin-spin coupling too, exhibits mode level attraction in the spectrum. By tuning the phase parameter at each ferromagnetic insulator we can shift the order of "dark" and "bright" collective modes with phase difference equal to 0 or π. Moreover, by selectively applying the phase shifted field it is possible to construct "dark" and "bright" collective modes with phase difference equal to \pm π/2:
A CMB Search for the Neutrino Mass Mechanism and its Relation to the $H_0$ Tension
Creators: name: Escudero, Miguel
name: Witte, Samuel J.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Physics - Experiment (hep-ex)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The majoron, a pseudo-Goldstone boson arising from the spontaneous breaking of global lepton number, is a generic feature of many models intended to explain the origin of the small neutrino masses. In this work, we investigate potential imprints in the Cosmic Microwave Background (CMB) arising from massive majorons, should they thermalize with neutrinos after Big Bang Nucleosynthesis via inverse neutrino decays. We show that Planck2018 measurements of the CMB are currently sensitive to neutrino-majoron couplings as small as $λ\sim 10^{-13}$, which if interpreted in the context of the type-I seesaw mechanism correspond to a lepton number symmetry breaking scale $v_L \sim \mathcal{O}(100) \, {\rm GeV}$. Additionally, we identify parameter space for which the majoron-neutrino interactions, collectively with an extra contribution to the effective number of relativistic species $N_{\rm eff}$, can ameliorate the outstanding $H_0$ tension.
description: 5 pages, 2 figures + Supplementary Material. Comments are welcome! v2: Minor clarifications added. References added. Expanded Table 1 and moved it to the main text. Results and conclusions remain unchanged. Matches Letter published in EPJC. Ancillary file contains the obtained Planck legacy bound on neutrino-majoron interactions at 95%CL
Additional file 2: of Implementation strategies, and barriers and facilitators for implementation of physical activity at work: a scoping review
Creators: name: Garne-Dalgaard, Anne
name: Mann, Stephanie
name: Bredahl, Thomas
name: Stochkendahl, Mette
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Physiology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: TDF coding manual. TDF domains, definitions and constructs used to code barriers and facilitators. (DOCX 18 kb)
Listronotus incompletus
Creators: name: Morrone, Juan J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Listronotus
Listronotus incompletus

description: Listronotus incompletus (Hatch, 1971)
 Hyperodes incompletus Hatch, 1971: 296 (type locality: USA: “e Wn., s Id., e Or.”; type material: H: USNM). Listronotus incompletus; O’Brien and Wibmer, 1982: 69.
 Distribution. USA (O’Brien and Wibmer, 1982).
description: Published as part of Morrone, Juan J., 2011, Annotated checklist of the tribe Listroderini (Coleoptera: Curculionidae: Cyclominae) 3119, pp. 1-68 in Zootaxa 3119 (1) on page 40, DOI: 10.11646/zootaxa.3119.1.1, http://zenodo.org/record/5246257
Additional file 1 of Fasting blood glucose-to-glycated hemoglobin ratio and all-cause mortality among Chinese in-hospital patients with acute stroke: a 12-month follow-up study
Creators: name: Cai, Zhong-ming
name: Zhang, Man-man
name: Feng, Ren-qian
name: Zhou, Xu-dong
name: Chen, Hao-man
name: Liu, Zhi-peng
name: Wu, Yan-zhi
name: Lin, Qun-li
name: Ye, Sheng-lie
name: Liao, Cheng-wei
name: Huang, Xue-rong
name: Sun, Le-qiu
name: Yang, Bo
name: Zhu, Bei-lei
Publisher: name: figshare
Year: 2022
Subjects: Medicine
Biotechnology
Chemical Sciences not elsewhere classified
Cancer
Science Policy
Mental Health
Computational Biology

description: Additional file 1. Baseline characteristics of patients included and excluded.
MOESM1 of Early-life DNA methylation profiles are indicative of age-related transcriptome changes
Creators: name: Niran Hadad
name: Masser, Dustin
name: Blanco-Berdugo, Laura
name: Stanford, David
name: Freeman, Willard
Publisher: name: figshare
Year: 2019
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer

description: Additional file 1: Figure S1. Distribution of gene body methylation using RRBS and WGBS. A comparison of the distribution of gene body methylation across all genes in the liver measured by reduced representation bisulfite sequencing (RRBS) and whole-genome bisulfite sequencing (WGBS) obtained from GEO:GSE92486. RRBS covers methylation over portions of 23,000 genes as compared to near complete coverage of 29,000 genes by WGBS. The gene body methylation profiles obtained by RRBS do not represent the gene body methylation values observed by WGBS, likely in part due to the preference of RRBS for regions of high CG density which often have low levels of methylation (e.g., CpG Islands).
Effect of Reynolds number on a normal shock wave-transitional boundary-layer interaction over a curved surface
Creators: name: Coschignano, A.
name: Atkins, N.
name: Babinsky, H.
name: Serna, J.
Publisher: name: Apollo - University of Cambridge Repository
Year: 2019
Subjects: Research Article

description: Funder: Rolls-Royce (GB)
description: Abstract: The interaction between a normal shock wave and a boundary layer is investigated over a curved surface for a Reynolds number range, based on boundary-layer growing length x, of 0.44×106≤Rex≤1.09×106. The upstream boundary layer develops around the leading edge of the model before encountering a M∼1.4 normal shock. This is followed by adverse pressure gradients. The shock position and strength are kept constant as Re is progressively varied. Infra-red thermography is used to determine the nature of the upstream boundary layer. Across the Re range, this is observed to vary from fully laminar to fully turbulent across the entire span. Regardless of the boundary-layer state, the interaction remains benign in nature, without large scale shock-induced separation or unsteadiness. Schlieren images show a pronounced oblique wave developing upstream of the main shock for the laminar cases, this is believed to correspond to the separation and subsequent transition of the laminar shear layer. Downstream of the shock, in the presence of adverse pressure gradients, the boundary-layer growth rate is inversely proportional to Re. Nonetheless, across the entire range of inflow conditions the boundary layer recovers quickly to a healthy turbulent boundary layer. This suggests the upstream boundary-layer state, and its transition mechanism, to have little effect on the outcome of its interaction with a normal shock wave. Graphic abstract:
Front-end ASIC for Spectroscopic Readout of Virtual Frisch-Grid CZT Bar Sensors
Creators: name: Vernon, Emerson
name: De Geronimo, Gianluigi
name: Bolotnikov, Aleksey
name: Stanacevic, Milutin
name: Fried, Jack
name: Giraldo, Luis Ocampo
name: Wolniewicz, Kevin
name: Ackley, Kim
name: Salwen, Cynthia
name: Triolo, John
name: Pinelli, Don
name: Luong, Kenny
Publisher: name: arXiv
Year: 2019
Subjects: subject: Instrumentation and Detectors (physics.ins-det)
subject: FOS: Physical sciences

description: Compact multi-channel radiation detectors rely on low noise front-end application specific integrated circuits (ASICs) to achieve high spectral resolution. Here, a new ASIC developed to readout virtual Frisch-grid cadmium zinc telluride (VFG CZT) detectors for gamma ray spectroscopy is presented. Corresponding to each ionizing event in the detector, the ASIC measures the amplitude and timing at the anode, the cathode and four pad sense electrodes associated with each sensor in a detector array. The ASIC is comprised of 52 channels of which there are 4 cathode channels and 48 channels which can be configured as either anode channels with a baseline of 250 mV or pad sense channels to process induced signals with a baseline of 1.2 V. With a static power dissipation of 3 mW, each channel performs low-noise charge amplification, high-order shaping, peak and timing detection along with analog storage and multiplexing. The overall channel linearity was better than $\pm$ 1 % with timing resolution down to 700 ps for charges greater than 8 fC in the 3 MeV range. With a 4 x 4 array of 6 mm x 6 mm x 20 mm virtual Frisch-grid bar sensors connected and biased, an electronic resolution of $\approx$ 270 rms $e^{-}$ for charges up to 100 fC in the 3.2 MeV range was measured. Spectral measurements obtained with the 3D correction technique demonstrated resolutions of 1.8 % FWHM at 238 keV and 0.9 % FWHM at 662 keV.
description: This article contains 36 pages and 16 figures. At the time of this submission, this work is not yet published. The document was submitted to Nuclear Instruments and Methods, Physics A
Listronotus ingens Henderson 1940
Creators: name: Morrone, Juan J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Listronotus
Listronotus ingens

description: Listronotus ingens Henderson, 1940
 Listronotus ingens Henderson, 1940: 243 (type locality: USA: Oklahoma; type material: H: AMNH and P: AMNH, MCZ, PURC, and SEMC).
 Distribution. USA (O’Brien and Wibmer, 1982).
description: Published as part of Morrone, Juan J., 2011, Annotated checklist of the tribe Listroderini (Coleoptera: Curculionidae: Cyclominae) 3119, pp. 1-68 in Zootaxa 3119 (1) on page 40, DOI: 10.11646/zootaxa.3119.1.1, http://zenodo.org/record/5246257
Brane Fluctuation and anomalous muon magnetic moment
Creators: name: Park, Seong Chan
name: ~Song, H. S.
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We study the effects of extra dimensions on the muon anomalous magnetic moment with brane fluctuation. Since the coupling is naturally suppressed if brane fluctuation is considered by exponential softening factor for heavier states, the contribution from the whole Kaluza-Klein graviton tower is shown to be finite. The recent BNL E821 result is accomodated with $D=4+δ$ dimensional gravitational scale, $M_D$, in the range of $M_D \simeq 1.0 - 5.1$ TeV ($δ=2$), and $M_D \simeq 1.0 - 8.0 $ TeV ($δ=6$) with the brane tension parameter $f=(4π^2 τ)^{1/4}$, in the range $f = 1 - 10 $ TeV.
description: 8 pages, LaTeX, 2 eps Figures, references added, version to appear in PLB
A Study of Network-based Wavefront Estimation with Noise
Creators: name: Smith, Jeffrey
name: Cranney, Jesse
name: Gretton, Charles
name: Gratadour, Damien
Publisher: name: Proceedings of AO4ELT7 conference 2023 - Editors: Thierry Fusco and Benoit Neichel
Year: 2023
Subjects: MACHINE LEARNING
WAVEFRONT ESTIMATION
NOISE
CONTROL
PSF
R
MODAL ANALYSIS
CGAN
UNET

description: We provide an extended COMPASS simulation study of our existing Machine Learning based approaches towavefront estimation using Convolutional Neural Networks (CNN). These proceed by training a UNet to estimatethe wavefront phase from a wavefront sensor image. That network has application in PSF-R workflows and AOcontrol; both considered here. We make several extensions and novel contributions. First, evaluating historicalnetworks we study the spacial frequency response of network-based wavefront reconstruction for networks trainedunder distinct loss regimes; with and without an adversarial loss. Second, we study network-based estimationwith low magnitude guide stars, a setting where photon noise and read-out noise can impact performance. Wetrain new networks that use Deformable Mirror (DM) shape along with WFS data as input, as we find includingthe DM shape to be broadly advantageous. We evaluate the impact of a low signal to noise ratio under a learningregime that employs an adversarial loss. Previous work found that learning regime to be best when producing
networks for PSF-R. We find that noise substantially impacts training performance in this setting, and also theutility of such networks for PSF-R. On the other hand, training networks without adversarial loss yields robustand performant networks in the presence of noise. We evaluate such networks in a detailed control case study.
Microwave measurement beyond the quantum limit with a nonreciprocal amplifier
Creators: name: Lecocq, F.
name: Ranzani, L.
name: Peterson, G. A.
name: Cicak, K.
name: Metelmann, A.
name: Kotler, S.
name: Simmonds, R. W.
name: Teufel, J. D.
name: Aumentado, J.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Quantum Physics (quant-ph)
subject: Applied Physics (physics.app-ph)
subject: FOS: Physical sciences

description: The measurement of a quantum system is often performed by encoding its state in a single observable of a light field. The measurement efficiency of this observable can be reduced by loss or excess noise on the way to the detector. Even a \textit{quantum-limited} detector that simultaneously measures a second non-commuting observable would double the output noise, therefore limiting the efficiency to $50\%$. At microwave frequencies, an ideal measurement efficiency can be achieved by noiselessly amplifying the information-carrying quadrature of the light field, but this has remained an experimental challenge. Indeed, while state-of-the-art Josephson-junction based parametric amplifiers can perform an ideal single-quadrature measurement, they require lossy ferrite circulators in the signal path, drastically decreasing the overall efficiency. In this paper, we present a nonreciprocal parametric amplifier that combines single-quadrature measurement and directionality without the use of strong external magnetic fields. We extract a measurement efficiency of $62_{-9}^{+17} \%$ that exceeds the quantum limit and that is not limited by fundamental factors. The amplifier can be readily integrated with superconducting devices, creating a path for ideal measurements of quantum bits and mechanical oscillators.
description: 12 pages, 9 figures
Probing energetic light dark matter with multi-particle tracks signatures at DUNE
Creators: name: De Roeck, Albert
name: Kim, Doojin
name: Moghaddam, Zahra Gh.
name: Park, Jong-Chul
name: Shin, Seodong
name: Whitehead, Leigh H.
Publisher: name: Apollo - University of Cambridge Repository
Year: 2020
Subjects: Regular Article - Theoretical Physics
Beyond Standard Model
Neutrino Physics

description: Abstract: The search for relativistic scattering signals of cosmogenic light dark matter at terrestrial detectors has received increasing attention as an alternative approach to probe dark-sector physics. Large-volume neutrino experiments are well motivated for searches of dark matter that interacts very weakly with Standard Model particles and/or that exhibits a small incoming flux. We perform a dedicated signal sensitivity study for a detector similar to the one proposed by the DUNE Collaboration for cosmogenic dark-matter signals resulting from a non-minimal multi-particle dark-sector scenario. The liquid argon time projection chamber technology adopted for the DUNE detectors is particularly suited for searching for complicated signatures owing to good measurement resolution and particle identification, as well as dE/dx measurements to recognize merged tracks. Taking inelastic boosted dark matter as our benchmark scenario that allows for multiple visible particles in the final state, we demonstrate that the DUNE far detectors have a great potential for probing scattering signals induced by relativistic light dark matter. Detector effects and backgrounds have been estimated and taken into account. Model-dependent and model-independent expected sensitivity limits for a DUNE-like detector are presented.
Cosmological constant and Brane New World
Creators: name: Nojiri, Shin'ichi
name: Obregon, Octavio
name: Odintsov, Sergei D.
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The estimation of the cosmological constant in inflationary Brane New World models is done. It is shown that basically it is quite large, of the same order as in anomaly-driven inflation. However, for some fine-tuning of bulk gravitational constant and AdS scale parameter $l^2$ it may be reduced to sufficiently small value. Bulk higher derivative AdS gravity with quantum brane matter may also serve as the model where small positive cosmological constant occurs.
description: LaTeX 8 pages, minor changes to match with published version, one reference is added
MOESM11 of Early-life DNA methylation profiles are indicative of age-related transcriptome changes
Creators: name: Niran Hadad
name: Masser, Dustin
name: Blanco-Berdugo, Laura
name: Stanford, David
name: Freeman, Willard
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 11: Figure S7. Sequencing alignment and differentially methylated region calling summary statistics. A. Boxplots representing the mapping efficiency per group. B. Overall genomic sequencing coverage. C. Boxplots showing the number of CpGs covered. D. Boxplots representing the average CpG coverage per group. E. Line plot of the number of DMRs mapped to genes (black and red) and gene promoters (green and blue) passed filtering from RNA-sequencing. F. Line plot showing the number of CpG in regions passed filtering for differential methylation.
Additional file 1: of Avoidable waste of research related to outcome planning and reporting in clinical trials
Creators: name: Yordanov, Youri
name: Dechartres, Agnes
name: Atal, Ignacio
name: Tran, Viet-Thi
name: Boutron, Isabelle
name: Crequit, Perrine
name: Ravaud, Philippe
Publisher: name: figshare
Year: 2018
Subjects: Medicine
Biological Sciences not elsewhere classified
Developmental Biology
Science Policy

description: Summary of the inclusion and exclusion criteria for the different phases of the study. (DOCX 18 kb)
Do Changes in Economic Freedom affect Well-Being?
Creators: name: Belasen, Ariel R.
name: Hafer, R.W.
name: Belasen, Ariel R.
name: Hafer, R.W.
Publisher: name: Unknown
Year: 2013
Subjects: Community/Rural/Urban Development
Public Economics

description: In this paper we test the relationship between changes in economic freedom and wellbeing. Unlike previous work which has relied on international data sets, the novelty of this paper is that we use state-level data. Using the economic freedom measures provided by the Fraser Institute and a recently published data set on well-being across states, we find that improvements in economic freedom lead to increases in well-being for the average state. Further analysis shows that the presence of regional variations across the states may in fact suggest differences in optimal freedom levels between regions.