cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Triphora brychia Bouchet & Guillemot 1978
Creators: name: Bakker, Piet A. J.
name: Albano, Paolo G.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Triphoridae
Triphora
Triphora brychia

description: Triphora brychia Bouchet & Guillemot, 1978
Triphora brychia Bouchet & Guillemot, 1978: 355.
Strobiligera brychia (Bouchet & Guillemot, 1978) — Bouchet 1985: 29, fig. 15, 24.
Original localities. Porcupine Expedition 1870: off western Portugal, station 16, 994 fathoms deep (1818 m), 39°55’N, 9°56’W; off south–western Portugal: station 24, 292 fathoms deep (534 m), 37°19’N, 9°13’W; Gulf of Cádiz: stations 27, 322 fathoms deep (589 m), 36°37’N, 7°33’W, station 28, 304 fathoms deep (556 m), 36°29’N, 7°16’W 0, station 28a, 286 fathoms deep (523 m), 36°27’N, 6°54’W, station 29, 227 fathoms deep (415 m), 36°20’N, 6°47’W and station 30, 386 fathoms deep (706 m), 36°15’N, 6°52’W; the Adventure Bank in the Sicily Channel.
Type material. NHMUK 1855.11.5.2673–1855.11.5.2674, NHMUK 1885.11.5.3934–1885.11.5.3938, NHMUK 1985008 and USNM 87324, syntypes.
Distribution. Alboran Sea (Gofas et al. 2014), Bay of Biscay (Jeffreys 1885; Locard 1886; Tryon 1887; Dautzenberg 1927; Bouchet 1985; Bouchet & Warén 1993; Albano et al. 2019), Cape Verde (Fernandes & Rolán 1991; Rolán 2005), France (Locard 1897), Greece (Manousis et al. 2018), Gulf of Mexico (Dautzenberg 1927), Italy (Jeffreys 1885; Tryon 1887; di Geronimo et al. 2005), Mexico (Jeffreys 1885; Tryon 1887), Morocco (Bouchet 1985), Portugal (Locard 1897; Hidalgo 1917; Dautzenberg 1927), Portugal, Azores (Locard 1897; Bouchet 1985; Fernandes & Rolán 1991; Bouchet & Warén 1993; de Frais Martins et al. 2009), Portugal, Madeira (Segers et al. 2009), Rockall Bank (Hoffman et al. 2011), Spain (Hidalgo 1917; Peñas et al. 2006; Gofas et al. 2011), United States, Florida (Dall 1889a; Dall 1889b; Abbott 1974), United States, Georgia (Dall 1889a; Abbott 1974).
Geological age. Pleistocene (di Geronimo et al. 2005).
Remarks. This species occurs exclusively in the Eastern Atlantic. Records from the Western Atlantic are misidentifications, most likely of Triphora triserialis var. aspera Jeffreys, 1885. Because of the homonymy with Triforis asper Deshayes, 1866, Bouchet & Guillemot (1978) introduced the replacement name Triphora brychia.
description: Published as part of Bakker, Piet A. J. & Albano, Paolo G., 2022, Nomenclator, geographic and stratigraphic distribution of the family Triphoridae (Mollusca: Gastropoda), pp. 1-216 in Zootaxa 5088 (1) on page 39, DOI: 10.11646/zootaxa.5088.1.1, http://zenodo.org/record/5836536
title: Self-Retaining Retractor for Enhanced Surgical Visualization
Creators: name: Safir, Audrey
name: Narayanan, Arushi
name: Montemayor, Diego
name: Rose, Aryan
Publisher: name: University of Michigan
Year: 2024
Subjects: subject: medical device
subject: retractor
subject: low resource setting
subject: abdominal surgery
subject: Mechanical Engineering
subject: FOS: Mechanical engineering
subject: Engineering

description: During laparotomies (abdominal open surgeries) medical professionals struggle with clear and consistent cavity visibility, especially in resource-constrained environments. Current retractors enhance abdominal access but struggle with adaptability to patient sizes, easy sterilization, and low costs. We aim to enhance surgical efficacy by developing and testing a self-retaining device that is versatile, easy to use, and affordable. The device will reduce the necessary personnel while ensuring patient safety and simple sterilization. By addressing these issues, the retractor will be deployable in low and medium-income hospitals including Korle Bu Teaching Hospital in Accra, Ghana.
Scythris grandipennis Haworth 1828
Creators: name: Bidzilya, Oleksiy V.
name: Budashkin, Yury I.
name: Zhakov, Aleksandr V.
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Scythrididae
Scythris
Scythris grandipennis

description: Scythris grandipennis (Haworth, 1828)
Distribution. Great Britain, Ireland, Portugal, Spain, FranCe, Germany, SwitZerland, Russia (Center oF tHe European part?, Middle Volga region?, Central Ural?) (Bengtsson 1997; Sinev 2008). In Ukraine known only From Kiev Region (Sovinskiy 1938).
description: Published as part of Bidzilya, Oleksiy V., Budashkin, Yury I. & Zhakov, Aleksandr V., 2017, Checklist of scythridid moths (Lepidoptera, Scythrididae) of Ukraine with description of two new species, pp. 481-503 in Zootaxa 4291 (3) on page 499, DOI: 10.11646/zootaxa.4291.3.3, http://zenodo.org/record/827636
title: Baja 3-Speed Transmission
Creators: name: Grover, David
name: Bagri, Simran
name: Wu, Benjamin
name: Elizondo Del Bosque, Pablo
Publisher: name: University of Michigan
Year: 2024
Subjects: subject: Mechanical Engineering
subject: FOS: Mechanical engineering
subject: Automotive Engineering
subject: Baja
subject: Transmission
subject: Design
subject: Mechanical Engineering
subject: Engineering

description: The goal of this project is to develop a transmission for an off-road vehicle being built by the Michigan Baja Racing Team. Michigan Baja Racing races at 3 competitions annually, with the goal of winning the most cumulative points across all 3 points compared to other competing teams. During the 2023 & 2024 season, over 20% of points lost were due to lack of torque out of the transmission, and due to a transmission design improvement in 2024, the loss of points due to halted forward progress dropped from 25% in 2023 to 3% in 2024. Michigan Baja Racing has come to our team with the request to redesign the current transmission in order to decrease the amount of points lost during their competition season. Our ME450 team will compare the benefits of the current design to that of alternative designs and ultimately create a prototype of a recommended design. The final prototype will ideally include accurate gear sizing, integration plans with the existing CVT, 4WD system, rear axle, braking system, and chassis, and a reliable method for shifting between various gears. The scope of this report encompasses the context of the design problem, a high level overview of the design process employed to solve this problem, stakeholder analysis, the research and derivation of requirements and specifications, benchmarking analysis, design generation, design selection, and a timeline illustrating project milestones, tasks, and status.
Mesophora calcara Laseron 1958
Creators: name: Bakker, Piet A. J.
name: Albano, Paolo G.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Triphoridae
Mesophora
Mesophora calcara

description: Mesophora calcara Laseron, 1958
Mesophora calcara Laseron, 1958: 600, fig. 86–87.
Coriophora calcara (Laseron, 1958) — Özdikmen 2013: 254.
Type locality. Australia, Darwin, off Point Charles, 15–20 fathoms deep (27–37 m).
Type material. AMS C.103120, holotype.
Distribution. Australia (Laseron 1958).
description: Published as part of Bakker, Piet A. J. & Albano, Paolo G., 2022, Nomenclator, geographic and stratigraphic distribution of the family Triphoridae (Mollusca: Gastropoda), pp. 1-216 in Zootaxa 5088 (1) on page 40, DOI: 10.11646/zootaxa.5088.1.1, http://zenodo.org/record/5836536
Characterization of Rad23, as a shuttle factor
Creators: name: Okeke, Evelyn Ifeoma
Publisher: name: No Publisher Supplied
Year: 2019

description: The ubiquitin proteasome pathway (UPP) is the primary proteolytic system for the spatial and temporal elimination of intracellular proteins, and is conserved from yeast to humans. Proteins that are targeted for degradation become covalently linked to a small protein called ubiquitin and are subsequently degraded by the 26S proteasome. Key enzymes of this pathway and their function are well characterized, but the regulation of its activities is not well understood. For instance, it is widely believed that nuclear proteins are degraded inside the nucleus despite the evidence that some nuclear proteins are degraded following their export. There were a number of discoveries regarding the site of protein turnover. First, the Madura group and others reported that the degradation of some nuclear proteins required export from the nucleus. Second, substrates were stabilized inside the nucleus when nuclear export was blocked, strongly suggesting that proteasomes do not operate inside the nucleus. Third, it was reported that catalytically active proteasomes exist predominantly in the cytosol, since purified nuclei lacked proteasome peptidase activity. Fourth, it was determined that Sts1 plays a central role in proteasome localization. Through its interaction with Srp1 (an importin-α protein), and Rpn11 (a 19S proteasome subunit), Sts1 appears to localize proteasomes to the nuclear surface. Fifth, Srp1 was shown to harbor two distinct functions; it can act as nuclear import factor, and can tether the proteasome to the nuclear surface. These findings provide a basis for a mechanism for targeting proteasomes to the nucleus. Sixth, Rad23 functions as a shuttle factor that can translocate ubiquitylated proteins to the proteasome, and is known to control the stability of the nuclear protein Rad4. The shuttle factor Rad23 is present in both the nucleus and cytosol. This suggests that Rad23 might deliver nuclear substrates to cytosolic proteasomes. Using two genetic mutants, I tested this hypothesis and found that Rad23 bound high levels of polyUb substrates when it was trapped inside the nucleus. In contrast, when it was trapped in the cytosol it interacted with low levels of polyUb substrates. Whereas previous studies examined artificial substrates, I confirmed this binding pattern using the physiological substrate Ho endonuclease, which functions in mating type switching in yeast. Therefore I propose that the function of Rad23 is to deliver nuclear substrate to proteasomes in the cytosol. The mode of nucleocytoplasmic trafficking of Rad23 remains to be discovered.
Additional file 1 of Antibiotic-induced microbiome depletion promotes intestinal colonization by Campylobacter jejuni in mice
Creators: name: Chen, Haohao
name: Zhang, Yanfang
name: Pan, Yi
name: Wu, Lin
name: Wang, Wenqian
name: Zhang, Hui
name: Lou, Hongqiang
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: Science Policy
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Supplementary Material 1
Dasylabris (Baltilla) arabica
Creators: name: Gadallah, Neveen S.
name: Lelej, Arkady S.
name: Brothers, Denis J.
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Mutillidae
Dasylabris
Dasylabris arabica

description: Dasylabris (Baltilla) arabica (Olivier, 1811)
Distribution in the Arabian Peninsula: “en Arabia” (Olivier 1811 as Mutilla arabica), Arabia (Lelej 2002). Extralimital distribution: Iraq, Palestine, North Africa (Lelej 2002).
description: Published as part of Gadallah, Neveen S., Lelej, Arkady S. & Brothers, Denis J., 2020, Biodiversity of the aculeate wasps (Hymenoptera: Aculeata) of the Arabian Peninsula: Vespoidea, Mutillidae, pp. 141-152 in Zootaxa 4754 (1) on page 143, DOI: 10.11646/zootaxa.4754.1.15, http://zenodo.org/record/3719037
The violent geography of borderization
Creators: name: Otruba, Ariel Amber Anya
Publisher: name: No Publisher Supplied
Year: 2019

description: Borderland communities unequally and disproportionately suffer at the altar of geopolitics. Rather than the periphery, borderlands are the epicenter of territorial conflict and contests over sovereignty. This is evident in the Republic of Georgia after the 2008 Russo-Georgian war, where the Federal Security Service (FSB) of the Russian Federation began incrementally and unilaterally demarcating sections of the boundary line to the disputed and unrecognized territory of South Ossetia. This dissertation uses a feminist geopolitics approach to critically examine the violent geography of this borderization process. In addition to performing de facto sovereignty, borderization is theorized as a biopolitical tool of leverage. Qualitative mixed methods and multi-sited ethnographic fieldwork in a series of “conflict-affected villages” adjacent to the South Ossetian Administrative Boundary Line reveal how the uncertainties of the elastic border impacts the in/security of rural populations, whose pasturelands, homes, and social worlds are now bifurcated by the hardening of this dividing line. Two in-depth empirical chapters illustrate the embodied and emotional experiences of border violence. The first chapter shows how borderization transforms borderland villages into a "neitherland," which is a type of zone of abandonment. Through an emphasis on gendered mobilities, the second chapter demonstrates how ambiguously demarcated sections of the boundary imperil men vis-à-vis women, putting them at risk of arbitrary detention by the Russian-backed security regime. Attention to the issue of restricted freedom of movement and how men confront the border regime exposes an emerging form of traumatic masculinity, reinforcing an understanding of border violence as a gendered phenomenon.
title: Cost-Effective Laparoscopic Training Simulator
Creators: name: Shimazaki Ito, Hideki
name: Fraser, Michael
name: Rallis, Maxwell
name: Turner, Xavier
Publisher: name: University of Michigan
Year: 2024
Subjects: subject: biomedical engineering
subject: surgical simulator
subject: low resource setting
subject: laparoscopy
subject: Mechanical Engineering
subject: FOS: Mechanical engineering
subject: Engineering

description: Laparoscopic surgery is a minimally invasive abdominal surgery that reduces scar size and infection risk compared to traditional surgeries. Laparoscopic simulators are a key part of training for OB/GYN doctors performing surgery worldwide. Current market simulators fail to meet the performance requirements at a price that resource constrained health facilities can afford. This lack of proper training tools hampers the ability to effectively teach and improve laparoscopic skills among medical professionals and students. Our team is making a low cost laparoscopic training simulator that provides tactical and visual feedback, and trains the skills needed for introductory OB/GYN laparoscopic procedures.
Privately Answering Queries on Skewed Data via Per Record Differential Privacy
Creators: name: Seeman, Jeremy
name: Sexton, William
name: Pujol, David
name: Machanavajjhala, Ashwin
Publisher: name: arXiv
Year: 2023
Subjects: subject: Databases (cs.DB)
subject: Cryptography and Security (cs.CR)
subject: FOS: Computer and information sciences

description: We consider the problem of the private release of statistics (like aggregate payrolls) where it is critical to preserve the contribution made by a small number of outlying large entities. We propose a privacy formalism, per-record zero concentrated differential privacy (PzCDP), where the privacy loss associated with each record is a public function of that record's value. Unlike other formalisms which provide different privacy losses to different records, PRzCDP's privacy loss depends explicitly on the confidential data. We define our formalism, derive its properties, and propose mechanisms which satisfy PRzCDP that are uniquely suited to publishing skewed or heavy-tailed statistics, where a small number of records contribute substantially to query answers. This targeted relaxation helps overcome the difficulties of applying standard DP to these data products.
description: 14 pages, 5 figures
Foreign aid allocation by autocratic and illiberal regimes: influence and competition of business elites
Creators: name: Öztürk, Sevinç
Publisher: name: No Publisher Supplied
Year: 2019

description: Research on the relationship between regime type and foreign aid allocation is limited in theoretical explanations and empirical support. This research attempts to fill this gap by aiming to find out why autocratic and illiberal governments give foreign aid, recognizing that aid provision is not peculiar to the liberal democracies. This study suggests a different theoretical mechanism for the assistance of non-democratic countries. I argue that, in non-democratic and illiberal countries, the nature of the relationship between the leader and business elites affects the aid allocation in terms of motivation and preferences over aid policies. Countries with illiberal and autocratic regime types become donors due to the political influence of business elites, given that foreign aid policies benefit business elites, particularly those that are politically influential. Concurrently, in these countries, business elite configuration influences the preferences of aid allocation. Using data from the Enterprise Survey, OECD and AidData, this study employs quantitative analysis and finds that non-democratic and illiberal regimes with high influence from the business elites are more likely to provide aid and in much higher amounts. Besides, using data from the World Bank and AidData, the findings of quantitative analyses show the dominance in the business elite structure drives the leaders to provide higher-value aid projects with less variation in the aid sector to the nations in-need. Robustness checks are implemented with alternative tests.
EMANDOSH OILASINING (FAGACEAE) ASOSIY TURKUM VA TURLARI. TARQALISHI VA AHAMIYATI
Creators: name: Mamasobirova, Santalatbonu
Publisher: name: Zenodo
Year: 2024

description: В данной статье подробно рассматривается биологическое разнообразие семейства буковых (Fagaceae), основные роды и их представители. Описывается глобальное распространение семейства, его географические и экологические особенности, а также адаптивные способности к различным экологическим условиям. Особое внимание уделяется значению семейства буковых в жизни человека, включая его роль в деревообрабатывающей промышленности, производстве лекарственного сырья и ландшафтной архитектуре. На основе результатов исследований подчеркивается актуальность сохранения представителей этого семейства.
Scythris fallacella Schlager 1847
Creators: name: Bidzilya, Oleksiy V.
name: Budashkin, Yury I.
name: Zhakov, Aleksandr V.
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Scythrididae
Scythris
Scythris fallacella

description: Scythris fallacella (Schläger, 1847)
Distribution. Central and SoutHern Europe, Russia (Center oF tHe European part?, Middle Volga region), Turkey (Bengtsson 1997; Nupponen et al. 2007; Sinev 2008). In Ukraine known From Lvov and Ternopol’ Regions (NowiCki 1860, as armatella SCHlaeg.; SCHille 1930).
description: Published as part of Bidzilya, Oleksiy V., Budashkin, Yury I. & Zhakov, Aleksandr V., 2017, Checklist of scythridid moths (Lepidoptera, Scythrididae) of Ukraine with description of two new species, pp. 481-503 in Zootaxa 4291 (3) on page 500, DOI: 10.11646/zootaxa.4291.3.3, http://zenodo.org/record/827636
Lebeckia gracilis Ecklon & Zeyher 1836
Creators: name: Roux, M. Marianne Le
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Fabales
Fabaceae
Lebeckia
Lebeckia gracilis

description: Lebeckia gracilis Ecklon & Zeyher (1836: 192)
Type: — SOUTH AFRICA. “Zwartkopsrivier”, Ecklon & Zeyher 1336 (lectotype SAM!, designated by Le Roux & Van Wyk (2007: 126); isolectotypes P!, S!).
Lebeckia subsecunda Gandoger (1913: 460), syn. nov. Type:— SOUTH AFRICA.Distr. “Mosselbay ad Brakriver”, Penther 2491 (lectotype LY!, designated here; isolectotypes M-image!, S-image!, W-image!).
description: Published as part of Roux, M. Marianne Le, 2022, Typification and synonymisation of the overlooked name Lebeckia subsecunda (Fabaceae), pp. 298-299 in Phytotaxa 559 (3) on page 298, DOI: 10.11646/phytotaxa.559.3.8, http://zenodo.org/record/7021783
Tricholabiodes arabicus Suarez 1967
Creators: name: Gadallah, Neveen S.
name: Lelej, Arkady S.
name: Brothers, Denis J.
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Mutillidae
Tricholabiodes
Tricholabiodes arabicus

description: Tricholabiodes arabicus Suárez, 1967
Distribution in the Arabian Peninsula: Oman (Suárez & Nonveiller 1990), Saudi Arabia (Madl 2018), United Arab
Emirates (Lelej & van Harten 2010), Yemen (Gribodo 1884 as Mutilla pedunculata; Invrea 1965 as T. semis-
triata and as T. aegyptiaca; Suárez 1967; Suárez & Nonveiller 1990; Madl 2018). Extralimital distribution: Djibouti, Egypt, Ethiopia, Niger, Somalia, Sudan (Madl 2018).
description: Published as part of Gadallah, Neveen S., Lelej, Arkady S. & Brothers, Denis J., 2020, Biodiversity of the aculeate wasps (Hymenoptera: Aculeata) of the Arabian Peninsula: Vespoidea, Mutillidae, pp. 141-152 in Zootaxa 4754 (1) on page 143, DOI: 10.11646/zootaxa.4754.1.15, http://zenodo.org/record/3719037
Scythris kasyi Hannemann 1962
Creators: name: Bidzilya, Oleksiy V.
name: Budashkin, Yury I.
name: Zhakov, Aleksandr V.
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Scythrididae
Scythris
Scythris kasyi

description: Scythris kasyi Hannemann, 1962
(Figs 22–24)
Material examined. 1♂, Kiev reg., Kiev distr., Muzychi vill., 27.vii.2006, at light (Nesterov); 3♂, Kiev reg., ObuHov distr., viCinity oF Malye DmitroviCHi vill., 1.vii.2016 (BidZilya) (gen. slide 292/16, O. BidZilya).
Distribution. Austria, Slovakia, Russia (SoutH Ural) (Bengtsson 1997; Nupponen еt al. 2000; Sinev 2008). New to Ukraine.
description: Published as part of Bidzilya, Oleksiy V., Budashkin, Yury I. & Zhakov, Aleksandr V., 2017, Checklist of scythridid moths (Lepidoptera, Scythrididae) of Ukraine with description of two new species, pp. 481-503 in Zootaxa 4291 (3) on pages 499-500, DOI: 10.11646/zootaxa.4291.3.3, http://zenodo.org/record/827636
title: An Enclosed Dew Formation Chamber
Creators: name: Martin, Carter
name: Gohl, Eric
name: Wilson, Audrey
name: Weick, Samantha
Publisher: name: University of Michigan
Year: 2024
Subjects: subject: reactions
subject: dew formation
subject: lab equipment
subject: enclosed chamber
subject: chemistry
subject: Mechanical Engineering
subject: FOS: Mechanical engineering
subject: Engineering

description: Rachel O'Brien's atmospheric chemistry research team would like to study the formation of dew on plant surfaces in a controlled environment. Currently, no effective solution exists that is scaled correctly and achieves the sterility needed to conduct research and gain accurate results for trace gas and dew analysis. A chamber is needed that produces repeatable and reliable emulation of the naturally occurring temperature differential on earth necessary for dew formation. This will allow for further studies on the byproducts of pollutants in our atmosphere that are created in the environment that our device intends to emulate.
Simulating the LOcal Web (SLOW) -- III: Synchrotron emission from the local cosmic web
Creators: name: Böss, Ludwig M.
name: Dolag, Klaus
name: Steinwandel, Ulrich P.
name: Hernández-Martínez, Elena
name: Khabibullin, Ildar
name: Seidel, Benjamin
name: Sorce, Jenny G.
Publisher: name: arXiv
Year: 2023
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: Aims: Detecting diffuse synchrotron emission from the cosmic web is still a challenge for current radio telescopes. We aim to make predictions about the detectability of cosmic web filaments from simulations. Methods: We present the first cosmological magnetohydrodynamic simulation of a 500 $h^{-1} c$Mpc volume with an on-the-fly spectral cosmic ray (CR) model. This allows us to follow the evolution of populations of CR electrons and protons within every resolution element of the simulation. We modeled CR injection at shocks, while accounting for adiabatic changes to the CR population and high-energy-loss processes of electrons. The synchrotron emission was then calculated from the aged electron population, using the simulated magnetic field, as well as different models for the origin and amplification of magnetic fields. We used constrained initial conditions, which closely resemble the local Universe, and compared the results of the cosmological volume to a zoom-in simulation of the Coma cluster, to study the impact of resolution and turbulent reacceleration of CRs on the results. Results: We find a consistent injection of CRs at accretion shocks onto cosmic web filaments and galaxy clusters. This leads to diffuse emission from filaments of the order $S_ν\approx 0.1 \: μ$Jy beam$^{-1}$ for a potential LOFAR observation at 144~MHz, when assuming the most optimistic magnetic field model. The flux can be increased by up to two orders of magnitude for different choices of CR injection parameters. This can bring the flux within a factor of ten of the current limits for direct detection. We find a spectral index of the simulated synchrotron emission from filaments of $α\approx$ -1.0 -- -1.5 in the LOFAR band.
description: 26 pages, 18 figures, accepted for publication in A&A
Trifora burnupi E. A. Smith 1910
Creators: name: Bakker, Piet A. J.
name: Albano, Paolo G.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Triphoridae
Trifora
Trifora burnupi

description: Trifora burnupi E.A. Smith, 1910
Trifora burnupi E.A. Smith, 1910: 196, pl. 7, fig. 8.
Type locality. South Africa, Durban.
Type material. NHMUK 1911.8.30.10, syntype.
Distribution. South Africa (Smith 1910; Albano et al. 2019).
description: Published as part of Bakker, Piet A. J. & Albano, Paolo G., 2022, Nomenclator, geographic and stratigraphic distribution of the family Triphoridae (Mollusca: Gastropoda), pp. 1-216 in Zootaxa 5088 (1) on page 40, DOI: 10.11646/zootaxa.5088.1.1, http://zenodo.org/record/5836536
Tricholabiodes aegyptiacus
Creators: name: Gadallah, Neveen S.
name: Lelej, Arkady S.
name: Brothers, Denis J.
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Mutillidae
Tricholabiodes
Tricholabiodes aegyptiacus

description: Tricholabiodes aegyptiacus (Radoszkowski, 1876)
Distribution in the Arabian Peninsula: Oman, Yemen (Suárez & Nonveiller 1990), United Arab Emirates (Lelej & van Harten 2010).
Extralimital distribution: Egypt (Radoszkowski 1876)
description: Published as part of Gadallah, Neveen S., Lelej, Arkady S. & Brothers, Denis J., 2020, Biodiversity of the aculeate wasps (Hymenoptera: Aculeata) of the Arabian Peninsula: Vespoidea, Mutillidae, pp. 141-152 in Zootaxa 4754 (1) on page 143, DOI: 10.11646/zootaxa.4754.1.15, http://zenodo.org/record/3719037
Therapeutic role of neurogenic transcription factors in spinal cord injury
Creators: name: Patel, Misaal N.
Publisher: name: No Publisher Supplied
Year: 2019

description: Spinal cord injury (SCI) results in neuronal damage and glial scar formation, leading to loss of function and paralysis below the injury site. Although there are assistive devices in the market, there are no therapeutics that promote complete repair and regeneration after SCI. Major hurdles in neural regeneration include a limited level of neurogenesis in the adult spinal cord, an inflammatory microenvironment that inhibits neurogenesis, axon regeneration, neuronal relay formation, and myelination at the injury site. Promoting endogenous neural stem and progenitor cells (NSPCs) for tissue regeneration represents a potential strategy for the treatment of SCI. However, adult NSPCs largely differentiate into glial cells and contribute to glial scar formation in the injured spinal cord. Using virus-mediated delivery system as a potential therapeutics, we examined the effects of neurogenic factors on SCI in a mouse model. We identified that neurogenic factors promote cell proliferation and activation of NSPCs by activating Notch and Nanog signaling pathways during the acute stage of SCI. These factors promote the generation of various types of neurons (e.g., glutamatergic and cholinergic interneurons) and inhibit the generation of GABAergic interneurons in the injured spinal cord. Importantly, during the chronic stage, the treatment reduces glial scar formation and dramatically improves functional locomotion. Collectively, these findings suggest the neurogenic factors represent promising therapeutic genes for the treatment of SCI and provide molecular insight for transcription factor-mediated functional recovery.
Post-translational modifications on the K2 domain modulate SOX9 transcriptional activity in lung cancer
Creators: name: Patrizii, Michele
Publisher: name: No Publisher Supplied
Year: 2019

description: Lung cancer is the deadliest cancer type, accounting for about 25% of all cancer-related deaths. Despite impressive advancements in the molecular characterization of lung cancer, more than 70% of lung cancer patients are still left with either no known clinically relevant driver mutation or with mutations for which there isn’t a targeted therapeutic option available. Thus, there is a great need to understand the underlying biology of this disease and to discover the molecular pathways driving its onset and progression. SOX9 is a transcription factor involved in several processes during embryonic development, and its role in promoting cancer-related features in lung cancer has been established. Here, we characterized the role of post-translational modifications in mediating SOX9-associated functions in the context of lung cancer, with a particular focus on modifications occurring on the K2 domain. We demonstrated that the K2 domain is able to modulate SOX9 transcriptional ability and that changes in the phosphorylation status of specific residues within K2 affect this mechanism. We were able to show that the K2 domain might represent a region of intrinsic disorder within SOX9, and that post-translational modifications are involved in the maintenance of this disorder, potentially resulting in the modulation of SOX9 ability to interact with binding partners. These results uncover the prominent role of the K2 domain in mediating specific SOX9 functions, thus contributing to dissect the mechanistic details of SOX9 impact on lung cancer onset and progression.
title: Tour Robot Module
Creators: name: Gurajada, Sunaad
name: Rodger, Joseph
name: Yachamaneni, Shreyhas
name: Makkar, Siddhant
Publisher: name: University of Michigan
Year: 2024
Subjects: subject: Robotics
subject: human-robot interaction
subject: tour guide
subject: visual engagement
subject: Mechanical Engineering
subject: FOS: Mechanical engineering
subject: Engineering

description: This project focuses on developing a visual engagement module for the Toyota Human Service Robot (HSR) to enhance robot-led tours of the Ford Robotics Building (FRB). Featuring a projector mounted on a two-axis gimbal, the module projects dynamic content onto floors and walls, making tours more immersive. The module with the HSR can determine projection locations via ArUco tag detection and orient the gimbal to project content on that location. Designed for engagement, safety, and performance, the system uses 3D-printed and laser-cut components for rapid iteration. Rigorous testing, including sample tours, will assess improvements in user engagement, guidance clarity, and safety, ensuring the module enhances the tour experience.
Marshallora bubistae F. Fernandes & Rolan 1988
Creators: name: Bakker, Piet A. J.
name: Albano, Paolo G.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Triphoridae
Marshallora
Marshallora bubistae

description: Marshallora bubistae F. Fernandes & Rolán, 1988
Marshallora bubistae F. Fernandes & Rolán, 1988: 25, pl. 1, fig. 4, pl. 2, fig. 4.
Type locality. Cape Verde, “fica designada a ilha da Boavista” (the island Boavista).
Type material. MNCN 11–41–1014, holotype. MNHN-IM-2000-377 and NHMUK 1988079, paratypes.
Distribution. Cape Verde (Fernandes & Rolán 1988; Fernandes & Rolán 1991; Ardovini & Cossignani 2004; Rolán 2005; Albano et al. 2019).
description: Published as part of Bakker, Piet A. J. & Albano, Paolo G., 2022, Nomenclator, geographic and stratigraphic distribution of the family Triphoridae (Mollusca: Gastropoda), pp. 1-216 in Zootaxa 5088 (1) on page 39, DOI: 10.11646/zootaxa.5088.1.1, http://zenodo.org/record/5836536
Boosting Biomolecular Switch Efficiency With Quantum Coherence
Creators: name: Burkhard, Mattheus
name: Pusuluk, Onur
name: Farrow, Tristan
Publisher: name: arXiv
Year: 2023
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The resource theory of quantum thermodynamics has emerged as a powerful tool for exploring the out-of-equilibrium dynamics of microscopic and highly correlated systems. Recently, it has been employed in photoisomerization, a mechanism facilitating vision through the isomerism of the photo receptor protein rhodopsin, to elucidate the fundamental limits of efficiency inherent in this physical process. Limited attention has been given to the impact of energetic quantum coherences in this process, as these coherences do not influence the energy level populations within an individual molecule subjected to thermal operations. However, a specific type of energetic quantum coherences can impact the energy level populations in the scenario involving two or more molecules. In this study, we examine the case of two molecules undergoing photoisomerization to show that energetic quantum coherence can function as a resource that amplifies the efficiency of photoisomerization. These insights offer evidence for the role of energetic quantum coherence as a key resource in the realm of quantum thermodynamics at mesoscopic scales.
description: 9 pages, 5 figures
Scythris eversmanni K. Nupponen & T. Nupponen 2000
Creators: name: Bidzilya, Oleksiy V.
name: Budashkin, Yury I.
name: Zhakov, Aleksandr V.
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Scythrididae
Scythris
Scythris eversmanni

description: Scythris eversmanni K. Nupponen & T. Nupponen, 2000
Distribution. Russia (SoutH Ural) (Nupponen еt al. 2000; Sinev 2008). In Ukraine known only From tHe Donetsk Region (Nupponen 2005).
description: Published as part of Bidzilya, Oleksiy V., Budashkin, Yury I. & Zhakov, Aleksandr V., 2017, Checklist of scythridid moths (Lepidoptera, Scythrididae) of Ukraine with description of two new species, pp. 481-503 in Zootaxa 4291 (3) on page 500, DOI: 10.11646/zootaxa.4291.3.3, http://zenodo.org/record/827636
title: Baja SAE Adaptive Suspension
Creators: name: Ferrara, Ana
name: Hetrick, Luke
name: Lee, Rudy
name: May, Marisa
Publisher: name: University of Michigan
Year: 2024
Subjects: subject: Adaptive suspension
subject: off-road suspension
subject: engineering design process
subject: valved shock
subject: Mechanical Engineering
subject: FOS: Mechanical engineering
subject: Engineering

description: The Michigan Baja Racing team needs a way to modify the damping rate of their shocks to improve vehicle performance through different events and obstacles without changing any internal components of the shock. This semester, the team should develop an external mechanism prototype that can accurately control the damping rate of the shock. Once the prototype has been verified, the team should incorporate some open or closed-loop control system to actuate change in damping as a response to live input.
Plant recruitment dynamics in urban forests: consequences for seed and seedling establishment
Creators: name: Piana, Max Robert
Publisher: name: No Publisher Supplied
Year: 2019

description: Plant recruitment dynamics in urban ecosystems can be influenced by multiple co-occurring and often exacerbated conditions and stressors common to most cities. Urban associated habitat fragmentation and land transformation, altered climate and microclimates, biotic invasion, pollution (e.g. elevated atmospheric carbon and nitrogen), and human activity, both direct and indirect, are all observed to have species-specific effects that may limit or facilitate recruitment success. A core question is whether urban ecosystems are functionally different, and if so, what that means for management and restoration practice. This dissertation investigates the application of plant life history frameworks and analyses in the context of urban forest populations. Chapter 1 presents a review of recent literature and a modified recruitment limitation framework for understanding plant recruitment dynamics within urban ecosystems. In the subsequent chapters (2-5) I present a series of related studies that examine seed and site limitation in urban and rural oak-hickory forests located in the New York City metropolitan area. Chapter 2 compares the advance regeneration of native tree species in these sites and the implications for urban forest management. I found urban forests to be seedling limited, however advance regeneration stages were not different from rural forests. Chapter 3 uses the recruitment limitation framework to investigate the relative contribution of seed and site as limiting factors for seedling establishment. Urban and rural forests were both strongly site limited. The native canopy in urban forests is limited by site factors, not seed availability. Chapter 4 presents findings from a seed addition experiment that tested the influence of seed predation and herbivory on early seedling establishment in urban and rural forests. This experiment confirms that seed predation and herbivory pressure is greater in urban forests and contributes to the observed differences in urban and rural forest seedling recruitment. Finally, Chapter 5 presents a multi-year experiment of seed predation dynamics that identifies differences in the temporal pattern of seed removal in urban and rural forests; a potentially critical shift in forest function. Collectively, this dissertation identifies ecological mechanisms that limit plant recruitment in urban forests. A comprehensive understanding of urban recruitment limitation, as a scientific foundation with respect to plant abundance and distribution, will allow us to successfully conserve, manage, and restore plant communities to enhance the human experience of nature in cities.
Triphora buscheri Landau, Ceulemans & Van Dingenen 2018
Creators: name: Bakker, Piet A. J.
name: Albano, Paolo G.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Triphoridae
Triphora
Triphora buscheri

description: † Triphora buscheri Landau, Ceulemans & Van Dingenen, 2018
Triphora buscheri Landau, Ceulemans & Van Dingenen, 2018: 223, pl. 48, fig. 1.
Type locality. France, Le Grand Chauvereau, St.–Clément–de–la–Place, Maine–et– Loire.
Type stratum. Upper Miocene, Tortonian.
Type material. NHMW 2016 /0103/1509, holotype.
Distribution. France (Landau et al. 2018).
Geological age. Miocene (Landau et al. 2018).
description: Published as part of Bakker, Piet A. J. & Albano, Paolo G., 2022, Nomenclator, geographic and stratigraphic distribution of the family Triphoridae (Mollusca: Gastropoda), pp. 1-216 in Zootaxa 5088 (1) on page 40, DOI: 10.11646/zootaxa.5088.1.1, http://zenodo.org/record/5836536
Curtia montevidensis Arechavaleta 1911
Creators: name: Gomes-Silva, Francione
name: Perez, Lucia M.
name: Alves, Marccus
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Gentianales
Gentianaceae
Curtia
Curtia montevidensis

description: Curtia montevidensis Arechavaleta (1911: 65–66)
Type:— URUGUAY. Montevideo: arenales húmedos de Carrasco, April 1874, fl., fr., J. Arechavaleta 163 (holotype, MVM barcode MVM0000309!).
description: Published as part of Gomes-Silva, Francione, Perez, Lucia M. & Alves, Marccus, 2021, The discovery of the holotype of Curtia montevidensis (Gentianaceae), pp. 158-160 in Phytotaxa 527 (2) on page 160, DOI: 10.11646/phytotaxa.527.2.9, http://zenodo.org/record/5744511
Tricholabiodes aldryhimi Soliman 2016
Creators: name: Gadallah, Neveen S.
name: Lelej, Arkady S.
name: Brothers, Denis J.
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Mutillidae
Tricholabiodes
Tricholabiodes aldryhimi

description: Tricholabiodes aldryhimi Soliman, 2016
Distribution in the Arabian Peninsula: Saudi Arabia (Soliman 2016), United Arab Emirates (Lelej & van Harten 2010 as T. spec. 3).
Extralimital distribution: No records.
Remarks: The identity of the specimens from the United Arab Emirates with those from Saudi Arabia was established by comparisons of original specimens from both sources by Lelej and Brothers.
description: Published as part of Gadallah, Neveen S., Lelej, Arkady S. & Brothers, Denis J., 2020, Biodiversity of the aculeate wasps (Hymenoptera: Aculeata) of the Arabian Peninsula: Vespoidea, Mutillidae, pp. 141-152 in Zootaxa 4754 (1) on page 143, DOI: 10.11646/zootaxa.4754.1.15, http://zenodo.org/record/3719037
title: My Breathing Buddy
Creators: name: Lee, Josh
name: Senan, Rohan
name: Williams, Elijah
name: Young, Cole
Publisher: name: University of Michigan
Year: 2024
Subjects: subject: electromechanical engineering
subject: music
subject: teaching device
subject: breathwork
subject: Mechanical Engineering
subject: FOS: Mechanical engineering
subject: Engineering

description: The My Breathing Buddy (MBB 2.0) is a manually pumped lung, rib cage, and diaphragm simulator that demonstrates breathwork to help musicians visualize and understand breathing mechanics from an anatomical perspective. With the MBB 3.1, we aim to design, manufacture, and evaluate an electro-mechanical actuation system to inflate and deflate the MBB to represent four different breathing techniques relevant to musicians. We will produce one unit, designed for small-scale production of ten to fifteen units per year, focusing on decreasing complexity, noise, and form factor.
Parascythris muelleri Mann 1871
Creators: name: Bidzilya, Oleksiy V.
name: Budashkin, Yury I.
name: Zhakov, Aleksandr V.
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Scythrididae
Parascythris
Parascythris muelleri

description: Parascythris muelleri (Mann, 1871)
Material examined. 1♂, Kiev gub., Il’intsy, 31.v.1905 (Sovinskiy); 1♂, Kiev, Teremki, 15.vi.1957 (Ermolenko) (SIZK); 1♂, Kiev reg., Irpen’, 15.vi.1980 (Nesterov) (SIZK); 1♂, Crimea, Aj-Petri, 6.vii.2002, at light (Budashkin); 3♂, 3♀, Crimea, Aj-Petri, aFternoon on jajla, 14.vi.2003 (Budashkin); 1♂, 1♀, Kiev reg., Vyshgorod distr., vicinity of Rovzhy vill., 19.vi.2004 (Rut’jan); 1♂, 1♀, Odessa reg., Kotovsk distr., W vivinity of Borshchi vill., 28.v.2011 (Khalaim); 4♂, 2♀, Kiev reg., Mironovskiy distr., 4 km W Hodorov vill., evening collection, 24.v.2015 (BidZilya).
Distribution. Germany, Austria, CZeCH RepubliC, Slovakia, Poland, Hungary, Romania, Latvia, Bulgaria, Russia (Center oF tHe European part, SoutH Ural) (Bengtsson 1997; Nupponen еt al. 2000; Sinev 2008). In Ukraine known From Ternopol’ and Kiev Regions (Sovinskiy 1938; Rebel 1938, as tolli sp. n.; Toll 1938, as tolli Rbl.). New to Crimea.
description: Published as part of Bidzilya, Oleksiy V., Budashkin, Yury I. & Zhakov, Aleksandr V., 2017, Checklist of scythridid moths (Lepidoptera, Scythrididae) of Ukraine with description of two new species, pp. 481-503 in Zootaxa 4291 (3) on page 500, DOI: 10.11646/zootaxa.4291.3.3, http://zenodo.org/record/827636
Triforis calculifera Gould 1861
Creators: name: Bakker, Piet A. J.
name: Albano, Paolo G.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Triphoridae
Triforis
Triforis calculifera

description: Triforis calculifera Gould, 1861
Triforis calculiferus Gould, 1861: 389.
Triphora calculifera Gould, 1861 — Kuroda & Habe 1952: 91.
Iniforis calculiferus (Gould, 1861) — Chang 1998: 7, fig. 9b.
Triphora calculiferus Gould, 1861 — Higo et al. 1999: 211, G1737.
Iniforis calculifera (Gould, 1861) — Chang & Wu 2005: 10, fig. 9.
Type locality. Japan, “Loo Choo” (Ryukyu Islands).
Type material. Redpath Museum 5203, original no. USNM 1252, lectotype.
Distribution. China Sea (Zongguo & Mao 2012), Japan (Gould 1861; Tryon 1887; Paetel 1888; Kuroda & Habe 1952; Johnson 1964; Higo et al. 1999; Chang & Wu 2005), Marshall Islands (Kosuge 1990), Taiwan (Chang 1998; Chang & Wu 2005; Chang 2006a).
Remarks. The genus Triforis is of feminine gender, therefore the original spelling should be Triforis calculifera. Lectotype designation by Johnson (1964).
description: Published as part of Bakker, Piet A. J. & Albano, Paolo G., 2022, Nomenclator, geographic and stratigraphic distribution of the family Triphoridae (Mollusca: Gastropoda), pp. 1-216 in Zootaxa 5088 (1) on page 40, DOI: 10.11646/zootaxa.5088.1.1, http://zenodo.org/record/5836536
Episcythris triangulella Ragonot 1874
Creators: name: Bidzilya, Oleksiy V.
name: Budashkin, Yury I.
name: Zhakov, Aleksandr V.
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Scythrididae
Episcythris
Episcythris triangulella

description: Episcythris triangulella (Ragonot, 1874)
Material examined. 1♂, Nikolaev distr., RLP TyliHulskiy Liman, TasHino vill., 28.vi.2010, at ligHt (Goloborod’ko); 1♀, Odessa reg., Kurudova balka, 12.vii.2014 (Novitckiy); 1♂, Odessa reg., Gradenintsy vill., 6.vii.2015 (NovitCkiy).
Distribution. NortH AFriCa, Portugal, FranCe (CorsiCa), Italy (Sardinia and SiCily), Romania, GreeCe, Bulgaria (Bengtsson 1997; Nupponen et al. 2007). New to Ukraine.
description: Published as part of Bidzilya, Oleksiy V., Budashkin, Yury I. & Zhakov, Aleksandr V., 2017, Checklist of scythridid moths (Lepidoptera, Scythrididae) of Ukraine with description of two new species, pp. 481-503 in Zootaxa 4291 (3) on page 500, DOI: 10.11646/zootaxa.4291.3.3, http://zenodo.org/record/827636
Tricholabiodes brothersi Lelej in Lelej & van Harten 2010
Creators: name: Gadallah, Neveen S.
name: Lelej, Arkady S.
name: Brothers, Denis J.
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Mutillidae
Tricholabiodes
Tricholabiodes brothersi

description: Tricholabiodes brothersi Lelej in Lelej & van Harten, 2010
Distribution in the Arabian Peninsula: United Arab Emirates (Lelej & van Harten 2010).
Extralimital distribution: No records.
description: Published as part of Gadallah, Neveen S., Lelej, Arkady S. & Brothers, Denis J., 2020, Biodiversity of the aculeate wasps (Hymenoptera: Aculeata) of the Arabian Peninsula: Vespoidea, Mutillidae, pp. 141-152 in Zootaxa 4754 (1) on page 143, DOI: 10.11646/zootaxa.4754.1.15, http://zenodo.org/record/3719037
Tricholabiodes chloroticus
Creators: name: Gadallah, Neveen S.
name: Lelej, Arkady S.
name: Brothers, Denis J.
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Mutillidae
Tricholabiodes
Tricholabiodes chloroticus

description: Tricholabiodes chloroticus (Gribodo, 1884)
Distribution in the Arabian Peninsula: Saudi Arabia (Lelej & van Harten 2006), Yemen (Gribodo 1884 as Mutilla chlorotica; Invrea 1965; Suárez & Nonveiller 1990; Lelej & van Harten 2006).
Extralimital distribution: No records.
description: Published as part of Gadallah, Neveen S., Lelej, Arkady S. & Brothers, Denis J., 2020, Biodiversity of the aculeate wasps (Hymenoptera: Aculeata) of the Arabian Peninsula: Vespoidea, Mutillidae, pp. 141-152 in Zootaxa 4754 (1) on page 143, DOI: 10.11646/zootaxa.4754.1.15, http://zenodo.org/record/3719037