cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1 of Association between any underlying health condition and COVID-19-associated hospitalization by age group, Washington State, 2020–2021: a retrospective cohort study
Creators: name: McConnell, Kate H.
name: Hajat, Anjum
name: Sack, Coralynn
name: Mooney, Stephen J.
name: Khosropour, Christine M.
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Neuroscience
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 60506 Virology
subject: FOS: Biological sciences
subject: Computational Biology

description: Additional file 1.
Transient Structures and Stream Interaction Regions in the Solar Wind: Results from EISCAT Interplanetary Scintillation, STEREO HI and Venus Express ASPERA-4 Measurements
Creators: name: Dorrian, Gareth
name: Breen, Andy
name: Davies, Jackie
name: Rouillard, Alexi
name: Fallows, Richard
name: Whittaker, Ian
name: Brown, Daniel
name: Harrison, Richard
name: Davis, Chris
name: Grande, Manuel
Publisher: name: arXiv
Year: 2012
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: We discuss the detection and evolution of a complex series of transient and quasi-static solar wind structures in the days following the well-known comet 2P / Encke tail disconnection event in April 2007. The evolution of transient solar wind structures ranging in size from < 105 km to > 106 km was characterized using one-minute time resolution observation of Interplanetary Scintillation (IPS) made using the European Incoherent SCA Tter (EISCA T) radar system. Simultaneously, the global structure and evolution of these features was characterized by the Heliospheric Imagers (HI) on the Solar TERrestrial RElations Observatory (STEREO) spacecraft, placing the IPS observations in context. Of particular interest was the observation of one transient in the slow wind apparently being swept up and entrained by a Stream Interaction Region (SIR). The SIR itself was later detected in-situ at Venus by the Analyser of Space Plasma and Energetic Atoms (ASPERA-4) instrument on the Venus Express (VEX) spacecraft. The availability of such diverse data sources over a range of different time resolutions enables us to develop a global picture of these complex events that would not have been possible if these instruments were used in isolation. We suggest that the range of solar wind transients discussed here maybe the interplanetary counterparts of transient structures previously reported from coronagraph observations and are likely to correspond to transient magnetic structures reported in in-situ measurements in interplanetary space. The results reported here also provide the first indication of heliocentric distances at which transients become entrained.
description: 32 pages, 16 Figures, published in Solar Physics, 2010
An optimal choice of Dirichlet polynomials for the Nyman-Beurling criterion
Creators: name: Bettin, Sandro
name: Conrey, J. Brian
name: Farmer, David W.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Number Theory (math.NT)
subject: FOS: Mathematics
subject: 11M26

description: We give a conditional result on the constant in the Báez-Duarte reformulation of the Nyman-Beurling criterion for the Riemann Hypothesis. We show that assuming the Riemann hypothesis and that $\sum_ρ\frac{1}{|ζ'(ρ)|^2}\ll T^{3/2-δ}$, for some $δ>0$, the value of this constant coincides with the lower bound given by Burnol.
description: 9 pages
Marinarozelotes jaxartensis
Creators: name: Sherwood, Danniella
name: Marusik, Yuri M.
name: Sharp, Adam
name: Ashmole, Philip
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Gnaphosidae
Marinarozelotes
Marinarozelotes jaxartensis

description: Marinarozelotes jaxartensis (Kroneberg, 1875)
Trachyzelotes jaxartensis: Levy 1998: 107, figs 25-28 (♂♀).
Marinarozelotes jaxartensis: Ponomarev and Shmatko 2020: 135, figs 7-8, 11, 30, 37-38, 50, 59 (♂♀).
Other citations.
For complete list of taxonomic references, see WSC (2023).
Material examined.
Ascension Island • 1♀; Packers Hole Cueva [Cave]; -7.923, -14.368; 13-17.III.1990; P. Ashmole and M. Ashmole leg.; ASC 0173 • 1♀; South Gannet Pools; -7.9865, -14.4015; 24.III.1990; P. Ashmole and M. Ashmole leg.; ASC 0259 • 1 immature; Letterbox [Peninsula]; -7.947, -14.297; 18-22 March 1990; P. Ashmole and M. Ashmole leg.; ASC 0745 • 1♀; Scouts Path [Green Mountain National Park]; -7.944, -14.346; 28.I.2020; [no collector stated]; ASC • 1♂; South Gannet Upper; -7.983, -14.399; 23-27 March 1990; P. Ashmole and M. Ashmole leg.; ASC 0592 • 1♀ Ascension Island; -7.94, -14.37; August-November 1957; E. A. Duffey leg.; No. 25; NHMUK.
Remarks.
 Invasive. Originally described from Central Asia, but now known to also occur across the Holarctic, and in Hawaii, India, Mexico, and South Africa (WSC 2023). First recorded from Ascension Island as Camillina acanthognathus (Purcell, 1907) by Duffey (1964). Specimens collected in the 1990s by Philip and Myrtle Ashmole (University of Edinburgh) indicate it is still found on the island.
description: Published as part of Sherwood, Danniella, Marusik, Yuri M., Sharp, Adam & Ashmole, Philip, 2023, A survey of Gnaphosidae (Arachnida, Araneae) from Ascension Island with description of a new species of Australoechemus Schmidt & Piepho, 1994, pp. 291-302 in African Invertebrates 64 (3) on page 291, DOI: 10.3897/afrinvertebr.64.113946
Nuntiaturberichte aus Deutschland 1572–1585 nebst ergänzenden Aktenstücken. Band 7: Nuntiatur Giovani Dolfins (1573–1574). Bearbeitet von Almut Bues, 1990
Creators: name: Venard, Marc
Publisher: name: Francia
Year: 2018

description: -
description: Francia, Bd. 18, Nr. 2 (1991)
Contribution of N* and Delta* resonances in K* Sigma(1190) photoproduction
Creators: name: Kim, Sang-Ho
name: Nam, Seung-il
name: Hosaka, Atsushi
name: Kim, Hyun-Chul
Publisher: name: arXiv
Year: 2012
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: In this talk, we report theoretical studies on the K*0 Sigma+(1190) photoproduction in the tree-level Born approximation, employing the effective Lagrangian method. We present the energy and angular dependences of the cross sections. It turns out that the N* and Delta* resonance contributions are negligible in the vicinity of the threshold. On the contrary, we observe that the kappa and K exchanges in the t channel and Delta(1232) in the s channel dominate the scattering process, reproducing the experimental data qualitatively well.
description: 4 pages, 7 figures, Talk given at the 20th International IUPAP Conference on Few-Body Problems in Physics, 20 ~ 25 August 2012, Fukuoka, Japan
Additional file 1 of The UAS thioredoxin-like domain of UBXN7 regulates E3 ubiquitin ligase activity of RNF111/Arkadia
Creators: name: Amhaz, Sadek
name: Boëda, Batiste
name: Chouchène, Mouna
name: Colasse, Sabrina
name: Dingli, Florent
name: Loew, Damarys
name: Henri, Julien
name: Prunier, Céline
name: Levy, Laurence
Publisher: name: figshare
Year: 2023
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Evolutionary Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer

description: Additional file 1: Figure S1. UBXN7 interacts with RNF111 RING domain. (a) Left panel: Schematic representation of Flag-RNF111 constructs generated by site-directed mutagenesis corresponding to internal successive deletions of the C-terminal region of RNF111 together with the result of their interaction with UBXN7. Right panel: HEK-293 cells were transiently transfected with HA-UBXN7-WT and the indicated Flag-RNF111 constructs, before Flag co-immunoprecipitation ofthe corresponding lysates and western blotting analysis using HA or Flag antibodies. The arrows indicate unmodified RNF111. (b) Sequence alignment (Clustal Omega) of the minimal RING region of human RNF111 and human RNF165 used in this study as defined in [29], along with rat RNF165 RING domain. Note that human and rat RNF165 are highly conserved with only one divergent amino acid in the minimal RING domain (annotated in bold). (c) Lysates from HEK-293 cells transfected with HA-UBXN7-WT and the indicated Flag-tagged RNF111 constructs, were immunoprecipitated with HA antibody and analyzed by western blotting along with the corresponding whole cell lysates (Input). The arrows indicate unmodified RNF111, the asterisk (*) indicates ubiquitylated RNF111.
Polarization Dependent Optical Control of Atomic Arrangement in Multilayer Ge-Sb-Te Phase Change Materials
Creators: name: Makino, Kotaro
name: Tominaga, Junji
name: Kolobov, Alexander V.
name: Fons, Paul
name: Hase, Muneaki
Publisher: name: arXiv
Year: 2012
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: We report the optical perturbation of atomic arrangement in the layered GeTe/Sb_{2}Te_{3} phase change memory material. To observe the structural change, the coherent A_{1} mode of GeTe_{4} local structure is investigated at various polarization angles of femtosecond pump pulses with the fluence at < 78 μJ/cm^{2}. p-polarization found to be more effective in inducing the A_{1} frequency shift that can be either reversible or irreversible, depending on the pump fluence. The predominant origin of this shift is attributed to rearrangement of Ge atoms driven by anisotropic dissociation of the Ge-Te bonds along the [111] axis after the p-polarized pulse irradiation.
description: 4 pages, 4 figures, to be published in Appl. Phys. Lett
Integrating Military Training and Archaeological Site Integrity: A Data Analysis Approach - Report (Legacy 09-435)
Creators: name: Means, Bernard
name: Knepper, Dennis
name: G. William Monoghan
Publisher: name: DoD Legacy Resource Management Program
Year: 2011
Subjects: subject: Marine Corps Base Camp Pendleton
valueUri: https://core.tdar.org/browse/geographic-keyword/75490/marine-corps-base-camp-pendleton
subject: Marine Air Ground Task Force Training Command
valueUri: https://core.tdar.org/browse/geographic-keyword/85395/marine-air-ground-task-force-training-command
subject: Marine Corps Base Quantico
valueUri: https://core.tdar.org/browse/geographic-keyword/78375/marine-corps-base-quantico
subject: Archaeological Feature
valueUri: https://core.tdar.org/browse/site-type/339/archaeological-feature
subject: Soil Mechanics
valueUri: https://core.tdar.org/browse/other-keyword/165887/soil-mechanics
subject: Soil Deformation
valueUri: https://core.tdar.org/browse/other-keyword/165888/soil-deformation
subject: Military Vehicle Impacts
valueUri: https://core.tdar.org/browse/other-keyword/165886/military-vehicle-impacts
subject: Site Integrity
valueUri: https://core.tdar.org/browse/other-keyword/165859/site-integrity
subject: Cultural Resources Stewardship
valueUri: https://core.tdar.org/browse/other-keyword/165860/cultural-resources-stewardship
subject: Military Training
valueUri: https://core.tdar.org/browse/other-keyword/164118/military-training
subject: Archaeological Sites
valueUri: https://core.tdar.org/browse/other-keyword/26555/archaeological-sites
subject: Site Stewardship Monitoring
valueUri: https://core.tdar.org/browse/investigation-type/19/site-stewardship-monitoring
subject: Methodology, Theory, or Synthesis
valueUri: https://core.tdar.org/browse/investigation-type/6/methodology-theory-or-synthesis
subject: Heritage Management
valueUri: https://core.tdar.org/browse/investigation-type/24/heritage-management

description: This project identified practical methods to measure impacts of military training activities on archaeological resources on DoD installations with the goal of sustaining these activities while complying with cultural resources stewardship responsibilities.
Sparse Minimum Discrepancy Approach to Sufficient Dimension Reduction with Simultaneous Variable Selection in Ultrahigh Dimension
Creators: name: Qian, Wei
name: Ding, Shanshan
name: Dennis Cook, R.
Publisher: name: Taylor & Francis
Year: 2018
Subjects: Space Science
Biotechnology
Information Systems not elsewhere classified
Mathematical Sciences not elsewhere classified

description: Sufficient dimension reduction (SDR) is known to be a powerful tool for achieving data reduction and data visualization in regression and classification problems. In this work, we study ultrahigh-dimensional SDR problems and propose solutions under a unified minimum discrepancy approach with regularization. When p grows exponentially with n, consistency results in both central subspace estimation and variable selection are established simultaneously for important SDR methods, including sliced inverse regression (SIR), principal fitted component (PFC), and sliced average variance estimation (SAVE). Special sparse structures of large predictor or error covariance are also considered for potentially better performance. In addition, the proposed approach is equipped with a new algorithm to efficiently solve the regularized objective functions and a new data-driven procedure to determine structural dimension and tuning parameters, without the need to invert a large covariance matrix. Simulations and a real data analysis are offered to demonstrate the promise of our proposal in ultrahigh-dimensional settings. Supplementary materials for this article are available online.
Warm H2O and OH in the disk around the Herbig star HD 163296
Creators: name: Fedele, D.
name: Bruderer, S.
name: van Dishoeck, E. F.
name: Herczeg, G. J.
name: Evans, N. J.
name: Bouwman, J.
name: Henning, Th.
name: Green, J.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: We present observations of far-infrared (50-200 micron) OH and H2O emission of the disk around the Herbig Ae star HD 163296 obtained with Herschel/PACS in the context of the DIGIT key program. In addition to strong [OI] emission, a number of OH doublets and a few weak highly excited lines of H2O are detected. The presence of warm H2O in this Herbig disk is confirmed by a line stacking analysis, enabled by the full PACS spectral scan, and by lines seen in Spitzer data. The line fluxes are analyzed using an LTE slab model including line opacity. The water column density is 10^14 - 10^15 cm^-2, and the excitation temperature is 200-300 K implying warm gas with a density n > 10^5 cm^-3. For OH we find a column density of 10^14 - 2x10^15 cm^-2 and T_ex ~ 300-500 K. For both species we find an emitting region of r ~ 15-20 AU from the star. We argue that the molecular emission arises from the protoplanetary disk rather than from an outflow. This far-infrared detection of both H2O and OH contrasts with near- and mid-infrared observations, which have generally found a lack of water in the inner disk around Herbig AeBe stars due to strong photodissociation of water. Given the similarity in column density and emitting region, OH and H2O emission seems to arise from an upper layer of the disk atmosphere of HD 163296, probing a new reservoir of water. The slightly lower temperature of H2O compared to OH suggests a vertical stratification of the molecular gas with OH located higher and water deeper in the disk, consistent with thermo-chemical models.
description: Accepted for publication in A&A
Additional file 2 of The UAS thioredoxin-like domain of UBXN7 regulates E3 ubiquitin ligase activity of RNF111/Arkadia
Creators: name: Amhaz, Sadek
name: Boëda, Batiste
name: Chouchène, Mouna
name: Colasse, Sabrina
name: Dingli, Florent
name: Loew, Damarys
name: Henri, Julien
name: Prunier, Céline
name: Levy, Laurence
Publisher: name: figshare
Year: 2023
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Evolutionary Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer

description: Additional file 2: Figure S2.UBXN7-UAS domain interaction with RNF111. (a) Whole cell extracts of HEK-293 cells individually transfected with HA-tagged UBXN7 constructs were pulled down with GST-RNF111-Cter-WT or CA and analyzed by western blotting using anti-HA antibody. The western blot corresponding to the input is shown in the upper panel. The Amount of GST proteins in the samples was revealed by stain-free as a control. (b) The UAS domain of UBXN7 binds directly to RNF111 RING domain. GST pull-down of GST or GST-UBXN7-UAS with recombinant RNF111-RING or RNF165-RING, WT or CA mutants shows direct binding of the RING domains of RNF111 and RNF165 with the UAS domain of UBXN7.
Erik Volkmar Heyen (Hrsg.), Formation und Transformation des Verwaltungswissens in Frankreich und Deutschland (18./19. Jh.). Formation et transformation du savoir administratif en France et en Allemagne (18e/19e s.), 1989
Creators: name: Schmale, Wolfgang
Publisher: name: Francia
Year: 2018

description: -
description: Francia, Bd. 18, Nr. 2 (1991)
Multilayer graphenes with mixed stacking structure: interplay of Bernal and rhombohedral stacking
Creators: name: Koshino, Mikito
name: McCann, Edward
Publisher: name: arXiv
Year: 2012
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We study the electronic structure of multilayer graphenes with a mixture of Bernal and rhombohedral stacking and propose a general scheme to understand the electronic band structure of an arbitrary configuration. The system can be viewed as a series of finite Bernal graphite sections connected by stacking faults. We find that the low-energy eigenstates are mostly localized in each Bernal section, and, thus, the whole spectrum is well approximated by a collection of the spectra of independent sections. The energy spectrum is categorized into linear, quadratic and cubic bands corresponding to specific eigenstates of Bernal sections. The ensemble-averaged spectrum exhibits a number of characteristic discrete structures originating from finite Bernal sections or their combinations likely to appear in a random configuration. In the low-energy region, in particular, the spectrum is dominated by frequently-appearing linear bands and quadratic bands with special band velocities or curvatures. In the higher energy region, band edges frequently appear at some particular energies, giving optical absorption edges at corresponding characteristic photon frequencies.
description: 13 pages, 10 figures
Additional file 1: of Synthesis and Characterization of Hierarchical ZSM-5 Zeolites with Outstanding Mesoporosity and Excellent Catalytic Properties
Creators: name: Song, Guoqiang
name: Chen, Wenting
name: Dang, Peipei
name: Yang, Shengyuan
name: Zhang, Yuan
name: Wang, Yuanyi
name: Xiao, Ruidi
name: Ma, Rong
name: Li, Fuxiang
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: Information Systems not elsewhere classified
subject: Marine Biology
subject: Infectious Diseases
subject: FOS: Health sciences

description: Electronic Supplementary Information. (DOC 20000 kb)
Additional file 4 of The UAS thioredoxin-like domain of UBXN7 regulates E3 ubiquitin ligase activity of RNF111/Arkadia
Creators: name: Amhaz, Sadek
name: Boëda, Batiste
name: Chouchène, Mouna
name: Colasse, Sabrina
name: Dingli, Florent
name: Loew, Damarys
name: Henri, Julien
name: Prunier, Céline
name: Levy, Laurence
Publisher: name: figshare
Year: 2023
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Evolutionary Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer

description: Additional file 4: Figure S3. FAF1 and FAF2 interaction with RNF111. (a) Sequence alignment of the UAS core region of human UBXN7, FAF1 and FAF2 corresponding to the thioredoxin-like fold domain using Clustal Omega. (b) HA-UBXN7-WT, HA-FAF1 and HA-FAF2 individually transfected in HEK-293 cells were pulled down with GST-RNF111-Cter-WT or CA and analyzed by western blotting using anti-HA antibody. The western blot corresponding to the input is shown in the upper panel. The Amount of GST proteins in the samples was revealed by stain-free as a control.
The Hanle effect of Ly$α$ in an MHD model of the Solar Transition Region
Creators: name: Stepan, Jiri
name: Bueno, Javier Trujillo
name: Carlsson, Mats
name: Leenaarts, Jorrit
Publisher: name: arXiv
Year: 2012
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: In order to understand the heating of the solar corona it is crucial to obtain empirical information on the magnetic field in its lower boundary (the transition region). To this end, we need to measure and model the linear polarization produced by scattering processes in strong UV lines, such as the hydrogen Ly$α$ line. The interpretation of the observed Stokes profiles will require taking into account that the outer solar atmosphere is highly structured and dynamic, and that the height of the transition region may well vary from one place in the atmosphere to another. Here we report on the Ly$α$ scattering polarization signals we have calculated in a realistic model of an enhanced network region, resulting from a state-of-the-art radiation MHD simulation. This model is characterized by spatially complex variations of the physical quantities at transition region heights. The results of our investigation lead us to emphasize that scattering processes in the upper solar chromosphere should indeed produce measurable linear polarization in Ly$α$. More importantly, we show that via the Hanle effect the model's magnetic field produces significant changes in the emergent $Q/I$ and $U/I$ profiles. Therefore, we argue that by measuring the polarization signals produced by scattering processes and the Hanle effect in Ly$α$ and contrasting them with those computed in increasingly realistic atmospheric models, we should be able to decipher the magnetic, thermal and dynamic structure of the upper chromosphere and transition region of the Sun.
description: Accepted for publication in The Astrophysical Journal Letters
title: Account Recovery Methods for Two-Factor Authentication (2FA): An Exploratory Study
Creators: name: Tiller, Lauren Nicole
Publisher: name: Old Dominion University Libraries
Year: 2020

description: System administrators have started to adopt two-factor authentication (2FA) to increase user account resistance to cyber-attacks. Systems with 2FA require users to verify their identity using a password and a second-factor authentication device to gain account access. This research found that 60% of users only enroll one second-factor device to their account. If a user’s second factor becomes unavailable, systems are using different procedures to ensure its authorized owner recovers the account. Account recovery is essentially a bypass of the system’s main security protocols and needs to be handled as an alternative authentication process (Loveless, 2018). The current research aimed to evaluate users’ perceived security for four 2FA account recovery methods. Using Renaud’s (2007) opportunistic equation, the present study determined that a fallback phone number recovery method provides user accounts with the most cyber-attack resistance followed by system-generated recovery codes, a color grid pattern, and graphical passcode. This study surveyed 103 participants about authentication knowledge, general risk perception aptitude, ability to correctly rank the recovery methods in terms of their attackr esistance, and recovery method perceptions. Other survey inquires related to previous 2FA, account recovery, and cybersecurity training experiences. Participants generally performed poorly when asked to rank the recovery methods by security strength. Results suggested that neither risk numeracy, authentication knowledge, nor cybersecurity familiarity impacted users’ ability to rank recovery methods by security strength. However, the majority of participants ranked either generated recovery codes, 39%, or a fallback phone number, 25%, as being most secure. The majority of participants, 45%, preferred the fallback phone number for account recovery, 38% expect it will be the easiest to use, and 46% expect it to be the most memorable. However, user’s annotative descriptions for recovery method preferences revealed that users are likely to disregard the setup instructions and use their phone number instead of an emergency contact number. Overall, this exploratory study offers information that researchers and designers can deploy to improve user’s 2FA- and 2FA account recovery- experiences.
title: Host Factor Experiment (HTBE_H1N1-C)
titleType: Other
Creators: name: J. Craig Venter Institute
name: University of Chicago
Publisher: name: Influenza Research Database
Year: 2020
Subjects: subject: FOS: Biological sciences

description: Human tracheobronchial epithelial (HTBE) cells are considered to serve as a good correlate of influenza virus infection in the human respiratory tract. All HTBE cells used in this study were obtained from a single donor. mRNA-Seq analysis was used to profile the cellular transcriptome of HTBE cells at multiple time points in response to infection with influenza A/California/04/09 (H1N1), A/Wyoming/03/03 (H3N2), and A/Vietnam/1203/04 (H5N1) HALo virus. The Influenza A/Vietnam/1203/04 (H5N1) HALo mutant virus is an attenuated H5N1 virus generated from wild-type Influenza A/Vietnam/1203/04 (H5N1) virus as described in Steel, J., et al. J Virol. 2009 Feb; 83(4):1742-53.
Additional file 5 of The UAS thioredoxin-like domain of UBXN7 regulates E3 ubiquitin ligase activity of RNF111/Arkadia
Creators: name: Amhaz, Sadek
name: Boëda, Batiste
name: Chouchène, Mouna
name: Colasse, Sabrina
name: Dingli, Florent
name: Loew, Damarys
name: Henri, Julien
name: Prunier, Céline
name: Levy, Laurence
Publisher: name: figshare
Year: 2023
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Evolutionary Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer

description: Additional file 5: Figure S4. U2OSUBXN7-KO CRISPR clones #1 and #2 sequences. Genomic UBXN7 exon 1 region is represented with exon 1 in capital letters, start codon (ATG) in bold, sgRNA inred (U2OS parental sequence). Codon translation to UBXN7 protein is indicated below the DNA sequence in blue. Genomic UBXN7 exon 1 region in U2OS UBXN7-KOclones #1 and #2 were amplified by PCR and cloned by TA cloning. For each clone, a total of 10 cloned PCR products were sequenced and the genomic modification detected are shown in red along with the corresponding protein modification in green.
Sheared Ising models in three dimensions
Creators: name: Hucht, Alfred
name: Angst, Sebastian
Publisher: name: arXiv
Year: 2012
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: The nonequilibrium phase transition in sheared three-dimensional Ising models is investigated using Monte Carlo simulations in two different geometries corresponding to different shear normals. We demonstrate that in the high shear limit both systems undergo a strongly anisotropic phase transition at exactly known critical temperatures T_c which depend on the direction of the shear normal. Using dimensional analysis, we determine the anisotropy exponent theta=2 as well as the correlation length exponents nu_parallel=1 and nu_perp=1/2. These results are verified by simulations, though considerable corrections to scaling are found. The correlation functions perpendicular to the shear direction can be calculated exactly and show Ornstein-Zernike behavior.
description: 6 pages, 3 figures
Erigeron intercalaris Sennikov, sp. 2023, hybr. nov.
Creators: name: Sennikov, Alexander N.
name: Kozhin, Mikhail N.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Asterales
Asteraceae
Erigeron
Erigeron intercalaris

description: 4. Erigeron × intercalaris Sennikov, sp. hybr. nov.
Fig. 7
Type.
 Russia. Karelian Republic: Louhi District, “Paanajärvi, Rajala, vägkant vid Mäntyjoki” [= northern side of Paanajärvi Lake, roadside between formerly populated places], 22.07.1936, H. Lindberg (holotype H 039504).
Description.
Stems 30-50 cm tall, branched in the upper third or half, intensely to slightly purple-coloured, evenly covered by numerous hairs 1-2 mm long. Cauline leaves 4-8 under the synflorescence, spaced, gradually decreasing towards the stem top, completely covered by numerous hairs 0.5-1(1.5) mm long on both sides or subglabrous at the base below. Synflorescence with long branches carrying solitary to 2-3 capitula, nearly corymbose at the top, with numerous hairs 0.8-1 mm long. Phyllaries 6-7.5 mm long, purple-coloured completely or in the apical part, abundantly covered by hairs 1-2 mm long. Ray flowers intensely lilac. Pappus greyish-white.
Flowers in July to August, fruits in August.
Distribution in Murmansk Region.
Tetrino Village, Apatity Town (Fig. 4D).
Global distribution.
Expected in the Boreal zone of Fennoscandia and Eastern Europe.
Etymology.
 The species epithet (intercalaris, Lat.: intercalary) reflects the intermediate morphology of the hybrid between its presumed parents. Nomenclatural note. The type locality has been extensively sampled for Erigeron plants, which were distributed by Lindberg (1944) in his exsiccatae. The material from the Mäntyjoki River distributed as Plantae Finlandiae Exsiccatae 1370 is taxonomically heterogeneous: a few plants of E. acris s.str. (H 339936 pro parte) were mixed with abundant collections of its hybrid with E. rigidus (H 339936 pro parte, H 039487, OULU 059260). The latter specimens are paratypes of our E. × intercalaris . The hybrid plants look very slender and depressed, much less vigorous than the specimens of E. acris s.str. collected in the same locality, thus probably indicating outbreeding depression (Bleeker et al. 2007).
Taxonomic note.
 The hybrid differs from E. acris in a regular purple colouration of its stems and phyllaries, and in a shorter and sparser pubescence on its leaves and stems. It differs from E. rigidus in a denser and longer hairiness of its stems, leaves and phyllaries, and in a lesser purple colouration of its stems and phyllaries.
description: Published as part of Sennikov, Alexander N. & Kozhin, Mikhail N., 2023, Taxonomic revision of the Erigeron acris group (Asteraceae) in Murmansk Region, Russia, reveals a complex pattern of native and alien taxa, pp. 83-128 in PhytoKeys 235 on page 83, DOI: 10.3897/phytokeys.235.111020
Feuille de route IFB 2021-2028: MUDIS4LS
Creators: name: Van Helden, Jacques
name: Seiler, Julien
name: Corguillé, Gildas Le
name: Médigue, Claudine
name: IFB Teams
Publisher: name: Zenodo
Year: 2021
Subjects: French Bioinformatics Institute, Open Science, FAIR, DMP, Mutualized Digital Space, Data science, Artificial Intelligence

description: The main goal of MuDiS4LS (Mutualized Digital Space for FAIR data in Life and Health Sciences) is to develop a framework that will rely on the national and regional data centers to enable scientists controlling the flow of biological data, from their origin (data-producing national infrastructures) to their public release in national or international repositories, while ensuring their mid-term securing during the intermediate phases of analysis and exploitation. The basis of MuDiS4LS will be the National Network of Computing Resources (NNCR) launched by IFB in 2017 with a mutualized task force contributed by permanent staff from 9 platforms located in 6 regions of France. Our objective is for the 21 member platforms of the IFB to collaborate in the operation of the NNCR, making it possible to extend its scope of action to 9 regions of France.
Constraints on large-extra-dimensions model through 125 GeV Higgs pair production at the LHC
Creators: name: Sun, Hao
name: Zhou, Ya-Jin
name: Chen, He
Publisher: name: arXiv
Year: 2012
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Based on the analysis of 5 fb^-1 of data at the LHC, the ATLAS and CMS collaborations have presented evidence for a Higgs boson with a mass in the 125 GeV range. We consider the 125 GeV neutral Higgs pair production process in the context of large-extra-dimensions (LED) model including the Kaluza-Klein (KK)excited gravitons at the LHC. We consider the standard model(SM) Higgs pair production in gluon-gluon fusion channel and pure LED effects through graviton exchange as well as their interferences. It is shown that such interferences should be included; the LED model raises the transverse momentum (Pt)and invariant mass (M_HH) distributions at high scales of Pt and M_HH of the Higgs pair production. By using the Higgs pair production we could set the discovery limit on the cutoff scale M_S up to 6 TeV for delta = 2 and 4.5 TeV for delta = 6.
description: 6 figures
Ein „Bildstein" von Volkwardingen, Gem. Bispingen, Kr. Soltau
Creators: name: Dürre, Wilcken
Publisher: name: Nachrichten aus Niedersachsens Urgeschichte
Year: 2019

description: -
description: Nachrichten aus Niedersachsens Urgeschichte, Bd. 44 (1975): Nachrichten aus Niedersachsens Urgeschichte
Additional file 6 of The UAS thioredoxin-like domain of UBXN7 regulates E3 ubiquitin ligase activity of RNF111/Arkadia
Creators: name: Amhaz, Sadek
name: Boëda, Batiste
name: Chouchène, Mouna
name: Colasse, Sabrina
name: Dingli, Florent
name: Loew, Damarys
name: Henri, Julien
name: Prunier, Céline
name: Levy, Laurence
Publisher: name: figshare
Year: 2023
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Evolutionary Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer

description: Additional file 6: Figure S5. UBXN7 does not modulate RNF111 mRNA level. QRT-PCR analysis of RNF111 mRNA level inU2OS, U2OS UBXN7-KO clones #1 and #2 (left panel), and in U2OS UBXN7-KO clone#1 where HA-UBXN7-WT, HA-UBXN7-DUAS and HA-UAS have been transiently reintroduced (right panel). cDNAwere synthetized using the iScript cDNA synthesis kit(Bio-Rad) from 1.5 μg of RNA extracted with Trizol(Invitrogen). QRT-PCR was performed in triplicate using the 2XSYBR Green qPCR master mix(Biotools) according to the manufacturer’s protocol in a Light Cycler 96(Roche). Expression of each gene was calculated by the 2-ΔΔCtmethods using GAPDH as a control. All data represent mean +/- SEM for three independent experiments. Statistical analyses were performed with One-WayANOVA using Prism 5.0 software. The following primers were used: GAPDH-FTGCACCACCAACTGCTTAGC, GAPDH-R GGCATGGACTGTGGTCATGAG, RNF111-FTTTTGGTGGCGGTGACAGA, RNF111-R ACTCTCCTGTGTCTTTGGTGC. ns: not significant. QRT-PCRvalues are shown in Additional file 3: Table S1.
title: Effects of Transparency and Haze on Trust and Performance During a Full Motion Video Analysis Task
Creators: name: Leibner, Sarah C.
Publisher: name: Old Dominion University Libraries
Year: 2020

description: Automation is pervasive across all task domains, but its adoption poses unique challenges within the intelligence, surveillance, and reconnaissance (ISR) domain. When users are unable to establish optimal levels of trust in the automation, task accuracy, speed, and automation usage suffer (Chung & Wark, 2016). Degraded visual environments (DVEs) are a particular problem in ISR; however, their specific effects on trust and task performance are still open to investigation (Narayanaswami, Gandhe, & Mehra, 2010). Research suggests that transparency of automation is necessary for users to accurately calibrate trust levels (Lyons et al., 2017). Chen et al. (2014) proposed three levels of transparency, with varying amounts of information provided to the user at each level. Transparency may reduce the negative effects of DVEs on trust and performance, but the optimal level of transparency has not been established (Nicolau & McKnight, 2006). The current study investigated the effects of varying levels of transparency and image haze on task performance and user trust in automation. A new model predicting trust from attention was also proposed. A secondary aim was to investigate the usefulness of task shedding and accuracy as measures of trust. A group of 48 undergraduates attempted to identify explosive emplacement activity within a series of full motion video (FMV) clips, aided by an automated analyst. The experimental setup was intended to replicate Level 5 automation (Sheridan & Verplank, 1978). Reliability of the automated analyst was primed to participants as 78% historical accuracy. For each clip, participants could shed their decision to an automated analyst. Higher transparency of

automation predicted significantly higher accuracy, whereas hazy visual stimuli predicted significantly lower accuracy and 2.24 times greater likelihood of task shedding. Trust significantly predicted accuracy, but not task shedding. Participants were fastest in the medium transparency condition. The proposed model of attention was not supported; however, participants’ scanning behavior differed significantly between hazy and zero haze conditions. The study was limited by task complexity due to efforts to replicate real-world conditions, leading to confusion on the part of some participants. Results suggested that transparency of automation is critical, and should include purpose, process, performance, reason, algorithm, and environment information. Additional research is needed to explain task shedding behavior and to investigate the relationship between degrade visual environments, transparency of automation, and trust in automation.
Donauländische Geräte aus dem südlichen Landkreis Hannover und dem Landkreis Hameln-Pyrmont
Creators: name: Krull, Reinhold
Publisher: name: Nachrichten aus Niedersachsens Urgeschichte
Year: 2019

description: -
description: Nachrichten aus Niedersachsens Urgeschichte, Bd. 45 (1976): Nachrichten aus Niedersachsens Urgeschichte
Double universality of a quantum phase transition in spinor condensates: the Kibble-Żurek mechanism and a conservation law
Creators: name: Swislocki, Tomasz
name: Witkowska, Emilia
name: Dziarmaga, Jacek
name: Matuszewski, Michal
Publisher: name: arXiv
Year: 2012
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We consider a phase transition from antiferromagnetic to phase separated ground state in a spin-1 Bose-Einstein condensate of ultracold atoms. We demonstrate the occurrence of two scaling laws, for the number of spin fluctuations just after the phase transition, and for the number of spin domains in the final, stable configuration. Only the first scaling can be explained by the standard Kibble-Żurek mechanism. We explain the occurrence of two scaling laws by a model including post-selection of spin domains due to the conservation of condensate magnetization.
Australoechemus Schmidt & Piepho 1994
Creators: name: Sherwood, Danniella
name: Marusik, Yuri M.
name: Sharp, Adam
name: Ashmole, Philip
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Gnaphosidae
Australoechemus

description: Australoechemus Schmidt & Piepho, 1994
Australoechemus Schmidt & Piepho in Schmidt et al. 1994: 101.
Type species.
 Australoechemus oecobiophilus Schmidt & Piepho, 1994 by original designation.
Diagnosis
 (tentative, based on species known from adults but not the type species, known only from an immature holotype). Murphy (2007: 13) placed Australoechemus into the Drassodes Group; genera of this informal grouping were defined based on to their relatively large size, "plain, tawny-light, light greyish abdomen, occasionally patterned", presence of a notch at the apex of the trochanters, and absence of a dorsal scutum in the male. At the generic level, Australoechemus (sensu Murphy, 2007) differs from other gnaphosids by the male palp with a U-shaped sperm duct not meandering, running along margins of the tegulum (vs. meandering, or not located on the margin of the tegulum in other presently known genera) and the presence of a tegular anteroprolateral membranous lamellar extension (Al) (Al absent in other presently known genera).
Remarks.
 This genus was described to accommodate two new species from the Cape Verde Islands: A. oecobiophilus Schmidt & Piepho, 1994 and A. celer Schmidt & Piepho, 1994. Australoechemus oecobiophilus was chosen as the type species although its holotype is a juvenile specimen. The diagnosis and illustrations given in the paper are very poor, for instance the generic diagnosis comprises solely the following short and vague sentence: "Von Echemus Simon, 1878 durch das Fehlen eines Putzkammes an Metatarsus III und IV unterschieden. Die Gattung scheint Xerophaeus Purcell, 1907 nahezustehen" ["Distinguished from Echemus Simon, 1878 by the absence of preening combs on metatarsi III and IV. The genus appears to be close to Xerophaeus Purcell, 1907"] (Schmidt et al. 1994: 101). A detailed illustrated redescription is given for A. celer by Murphy (2007), and it is on this greatly improved work that we decide to place A. vickyae sp. nov. in this genus, given general similarities in the overall structure of the male palp and female epigyne. It is essential that future workers clarify the taxonomy of the type species A. oecobiophilus based on adult specimens. This is outside the scope of the present work.
description: Published as part of Sherwood, Danniella, Marusik, Yuri M., Sharp, Adam & Ashmole, Philip, 2023, A survey of Gnaphosidae (Arachnida, Araneae) from Ascension Island with description of a new species of Australoechemus Schmidt & Piepho, 1994, pp. 291-302 in African Invertebrates 64 (3) on page 291, DOI: 10.3897/afrinvertebr.64.113946
Additional file 7 of The UAS thioredoxin-like domain of UBXN7 regulates E3 ubiquitin ligase activity of RNF111/Arkadia
Creators: name: Amhaz, Sadek
name: Boëda, Batiste
name: Chouchène, Mouna
name: Colasse, Sabrina
name: Dingli, Florent
name: Loew, Damarys
name: Henri, Julien
name: Prunier, Céline
name: Levy, Laurence
Publisher: name: figshare
Year: 2023
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Evolutionary Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer

description: Additional file 7: Figure S6. UBXN7-UAS binding to GST-RNF111-RING-WT in presence of increasing amount of E2. GSTpull-down of GST-RNF111-RING-WT with equimolar concentration of UBXN7-UAS inpresence of 1 to 5x molar excess of UBE2D2. The UBXN7-UAS input and the unbound proteins in the flow-through are shown. Proteins were analyzed by Coomassie staining on acrylamide gel.
Classification of symmetric toroidal orbifolds
Creators: name: Fischer, Maximilian
name: Ratz, Michael
name: Torrado, Jesus
name: Vaudrevange, Patrick K. S.
Publisher: name: arXiv
Year: 2012
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We provide a complete classification of six-dimensional symmetric toroidal orbifolds which yield N>=1 supersymmetry in 4D for the heterotic string. Our strategy is based on a classification of crystallographic space groups in six dimensions. We find in total 520 inequivalent toroidal orbifolds, 162 of them with Abelian point groups such as Z_3, Z_4, Z_6-I etc. and 358 with non-Abelian point groups such as S_3, D_4, A_4 etc. We also briefly explore the properties of some orbifolds with Abelian point groups and N=1, i.e. specify the Hodge numbers and comment on the possible mechanisms (local or non-local) of gauge symmetry breaking.
description: 51 pages, 24 figures
title: Peaceful Collaboration: The Truman Administration's Response to the Costa Rican Revolution of 1948 and the Costa Rica-Nicaragua Crisis of 1948-1949
Creators: name: Wilkerson, James
Publisher: name: Old Dominion University Libraries
Year: 2020

description: Before, during, and after the Costa Rican Revolution of 1948 and the Costa Rica-Nicaragua Crisis of 1948-1949, the Truman Administration maintained a posture of strict neutrality and helped to isolate, and bring a quick end to, both conflicts. This thesis attempts to revise the historiography of the Costa Rican Revolution by challenging the common view that the United States inaugurated the Cold War in Latin America by facilitating the overthrow of the communist-supported government in Costa Rica. The Truman Administration did not care who won and only wanted the Revolution and Crisis to come to a quick end. The United States’ response to the Costa Rican Revolution and the Costa Rica-Nicaragua Crisis was consistent with its broader hemispheric policy of promoting peaceful collaboration among the American republics in order to convince the Soviet Union that the Western Hemisphere was united against international communism.
Lithobius colchicus Muralevitch 1907
Creators: name: Kiria, Eleonora
name: Barjadze, Shalva
name: Tuf, Ivan Hadrian
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Chilopoda
Lithobiomorpha
Lithobiidae
Lithobius
Lithobius colchicus

description: 9. Lithobius colchicus Muralevitch, 1907
Distribution in Georgia.
 Kakheti • Lagodekhi (57) (Muralevitch 1926, 1929).
Global distribution.
Georgia (Muralevitch 1926, 1929), Russia (Muralevitch 1907).
Note.
Endemic to the Caucasus.
description: Published as part of Kiria, Eleonora, Barjadze, Shalva & Tuf, Ivan Hadrian, 2023, Checklist of Georgian centipedes (Myriapoda: Chilopoda), pp. 177-188 in Caucasiana 2 on page 177, DOI: 10.3897/caucasiana.2.e108535
Additional file 8 of The UAS thioredoxin-like domain of UBXN7 regulates E3 ubiquitin ligase activity of RNF111/Arkadia
Creators: name: Amhaz, Sadek
name: Boëda, Batiste
name: Chouchène, Mouna
name: Colasse, Sabrina
name: Dingli, Florent
name: Loew, Damarys
name: Henri, Julien
name: Prunier, Céline
name: Levy, Laurence
Publisher: name: figshare
Year: 2023
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Evolutionary Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer

description: Additional file 8: Figure S7. UBXN7 overexpression impairs TGF-b induced SKIL degradation to the same extent as Flag-RNF111-CA overexpression. U2OS UBXN7-KO clone #1 cells were transfected with HA-tagged empty vector, UBXN7-WT, UBXN7-DUAS or UBXN7-UAS, or with Flag-RNF111-CA; 24 h post-transfection, the cells were treated or not for 1 h with TGF-b before extraction of the nuclear fraction. Nuclear extracts were analyzed by western blotting with the indicated antibodies. PARP is used as nuclear loading control. The arrows indicate RNF111 protein.