cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Impact of the transcription factor IRF8 on limbal epithelial progenitor cells in a mouse model
Creators: name: Kesper, Christiane
name: Viestenz, Arne
name: Wiese-Rischke, Cornelia
name: Scheller-Wendorff, Marina
name: Hammer, Thomas
Publisher: name: Universitäts- und Landesbibliothek Sachsen-Anhalt
Year: 2022
Subjects: subject: 610

description: The limbus of the eye is the location of the corneal epithelial stem cell niche. These cells are necessary for continuous renewal of the corneal epithelium. In the case of limbal stem cell deficiency, these cells are damaged, and the whole cornea becomes opaque. It is important to be able to identify stem cells that could be applied for new therapeutic strategies. There are various known markers to characterize these cells, including p63, Nanog, oct4 and FGFR2. However, none of these markers are exclusively expressed in these stem cells (they are also expressed in transient amplified cells). It seems likely that a combination of stem cell markers will be necessary for corneal stem cell identification. The aim of this study was to detect IRF8 in limbal epithelial stem cells and to determine its function. In a mouse model, IRF8 could be detected in limbal and basal epithelial cells of the cornea by histological and immunohistological staining of wild-type mouse eyes. Furthermore, the limbus of the eye was significantly smaller in IRF8-knockout mice than in wild-type mice, and the expression of Nanog was lower in IRF8-knockout mice. This suggests that IRF8 has an influence on the maintenance of stem cell properties in the limbus, possibly by affecting the expression of Nanog. Furthermore, IRF8 has an impact on E-cadherin and N-cadherin expression in the mouse eye.
Estimates of parents anxiety level using state trait anxiety inventory (STAI) in situations of acute unplanned childhood hospitalization in the emergency department (AUCHED): Preliminary result of the AUCHED research programme
Creators: name: Embong, Hashim
name: Husyairi  Harunarashid
Publisher: name: F1000Research
Year: 2016

description: The Acute Unplanned Childhood Hospitalization in the Emergency Department (AUCHED) Research Programme was established in 2014 to investigate the context and management of anxiety in relation to the creation of a child-friendly emergency department. The first phase of this programmatic scientific inquiry seeks to explore the burden of anxiety amongst parents accompanying sick children presenting acutely to the hospital. The preliminary analysis of aggregated data of the first quarter from the year-long cross sectional studies is discussed. METHOD: A 12-month two-part cross sectional study, approved by the Institutional Review Board, conducted at the Department of Emergency Medicine, UKM Medical Centre which is a tertiary academic medical institution with an average of 72,000 presentations a year. All parents accompanying a child presenting to the study location during the study period, fitting the inclusion and exclusion criteria, are invited to participate; requiring a parent to fill a self-administered questionnaire on anxiety (STAI). RESULTS: A total of 105 subjects were recruited to date, with mean age of 33.9+6.4 years old. The mean raw State Anxiety score is 52.7+13.1, compared to a mean score for trait anxiety of 38.0+7.2, suggesting a heightened state of anxiety. The bottom 25% of the sample population reported a standardized t-score of 48.5 as compared to the 75th percentile with 58.8 or more. An estimated 1 in 5 parents have higher than expected anxiety compared to parents awaiting surgery reported in literature.  PRELIMINARY CONCLUSION: Parental anxiety appears to be significantly higher than expected, suggesting intervention is needed.
title: Begriffssalat - Das Quiz zu den Open-Access-Farben für Einsteiger*innen
Creators: name: Becklas, Carolin
Publisher: name: Genève : CERN
Year: 2025
Subjects: subject: open access
subject: open science
subject: gamification
subject: 020

description: Dieses interaktive PowerPoint-Quiz bietet Einsteiger*innen einen spielerischen Einstieg in die Welt des Open Access. Es vermittelt einen ersten Überblick über die verschiedenen Open-Access-Modelle und hilft dabei, deren Unterschiede und Besonderheiten zu verstehen. Das Quiz kann flexibel erweitert und an individuelle Beratungskontexte angepasst werden, um Open Access praxisnah und anschaulich zu vermitteln.
Additional file 1 of Intra and inter-operator reliability of an ultrasonographic automated software for the assessment of endometrial receptivity assessment
Creators: name: Saleh, Shahenda
name: Kamel, Rasha
name: Dayem, Tamer MAbdel
name: Attia, Rana N.
name: Negm, Sherif
name: Elgammal, Hisham H.
Publisher: name: figshare
Year: 2025
Subjects: subject: Space Science
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Mental Health

description: Supplementary Material 1: Figure S1. Logarithmic transformations of Bland Altman plots for intra-operator reliability. Figure S2. Logarithmic transformations of Bland Altman plots for inter-operator reliability. Figure S3. Variation between observers in different centres based on CV calculation (CV = Coefficient of Variation).
SCARE Guideline Checklist.docx
Creators: name: Choubisa, Chitrakshi
name: Vardhan, Vishnu
Publisher: name: figshare
Year: 2024
Subjects: classificationCode: 420106
subject: Physiotherapy

description: An array of congenital cardiac disorders known as partial anomalous pulmonary venous connections (PAPVC) occur when pulmonary veins, abnormally drain into the right atrium. This can happen directly into the right atrium or via draining into systemic veins. A 10 year old female patient had chief complaints of difficulty in breathing and frequent fever hence she visited rural hospital where 2D echo was done which reviled PAPVC associated with 16 mm ASD (Atrial Septal Defect). She underwent ASD closure along with pulmonary valvotomy as a part of surgical management after which a well-planned cardiac rehabilitation has been ingrained through several breathing methods such as breathing exercises, respiratory muscle strength and home exercise program, helping the patient to carry out her activities of daily living. The visual analogue scale (VAS), Respiratory Muscle Strength using MicroRPM device, 6 Minute Walk Distance (MWD), Borg Scale and Fatigue Severity Scale (FSS). In this present instance, carefully thought-out physical therapy rehabilitation has been shown to be successful in enhancing functional capacity, respiratory muscle strength, optimizing functional capacity, and lowering fatigue.
Additional file 1 of Harmonizing measurements: establishing a common metric via shared items across instruments
Creators: name: Eekhout, Iris
name: Weber, Ann M.
name: van Buuren, Stef
Publisher: name: figshare
Year: 2024
Subjects: Medicine
Biotechnology
Biological Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified
Science Policy

description: Additional file 1: R codes.
Dislocation of the proximal tibiofibular joint
Creators: name: Vervoort, Geertje
name: S Postma
name: B Meesters
Publisher: name: F1000Research
Year: 2016

description: A case report of a 23 years old patient presented in the ED after playing soccer. Dislocation of the proximal tibiofibular joint. Diagnosis & therapy.
Additional file 2 of Harmonizing measurements: establishing a common metric via shared items across instruments
Creators: name: Eekhout, Iris
name: Weber, Ann M.
name: van Buuren, Stef
Publisher: name: figshare
Year: 2024
Subjects: Medicine
Biotechnology
Biological Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified
Science Policy

description: Additional file 2: Full tabulation of simulation results on the level of mis-alignment and correlation for the model with equate groups and the model without equate groups under the different simulation study conditions.
Supplementary document for In vivo evaluation of a lipopolysaccharide-induced ear vascular leakage model in mice using photoacoustic microscopy - 5989742.pdf
Creators: name: Li, Zhe
name: He, Pengbo
name: Xu, Yuqing
name: Deng, Yuxiao
name: Gao, Yuan
name: Chen, Sung-Liang
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: Supplemental Document
Comparison of Phase I/II trials regarding antigen-specific versus non-specific anticancer immunotherapies
Creators: name: Holland, Julia
name: Zwerver, Renata
name: Nadina Grosios
name: Hoffmans, Raymond
Publisher: name: F1000Research
Year: 2016

description: Background

Antigen-specific immunotherapy targets particular tumor associated antigens in order to address and eradicate solely tumor-marker defined cancer cells. In contrast, antigen-non-specific agents generally stimulate the immune system by for example reversal of immune suppression, or activation of innate immunity for a better anti-cancer immune response. We investigated whether these different modes of action are reflected in study designs, objectives and results of Phase I/II studies.

Conclusions

There were differences in patient selection, objectives and results for studies with antigen-specific compared to antigen-non-specific agents. The main difference between the two groups are the use of single tumor indication (54% vs 6%), biomarker usage (51% vs 15%), and determining pharmacokinetics (6% vs 54%), respectively.
Correcting for induction phenomena on displays of different size
Creators: name: Bertalmío, Marcelo
name: Batard, Thomas
name: Jihyun Kim
Publisher: name: F1000Research
Year: 2016

description: In visual perception, induction designates the effect by which the lightness and chroma of a stimulus are affected by its vicinity, shifting towards its surround (assimilation) or away from it (contrast) depending on stimulus size (Helson 1963, Fach and Sharpe 1986).

When looking at an image on a display, observers commonly place themselves at a distance from the screen so that the angle of view is larger for larger displays. As a consequence, the visual induction phenomena will also change from one screen to another: the same image may show significant assimilation effects when viewed on a mobile phone, and less assimilation or even contrast when viewed in the cinema.

In this work we introduce a model for visual induction based on efficient coding that extends that of (Bertalmío 2014). Given an input image, we convolve it with a kernel which should depend on the apparent image size, and the resulting image qualitatively replicates psychophysical data. This allows us to propose the following method by which an image could be pre-processed in a screen-size dependent way so that its perception, in terms of visual induction, may remain constant across different displays:

-convolution of image I with kernel Sj produces image Oj that predicts the appearance of I at angle of view j, j=1,2;

-a compensation kernel C12 is defined as the inverse Fourier transform of the ratio of the Fourier transforms of S1 and S2;

-convolving I with C12 produces image Ip, and now convolution of this new image with S2 will produce O1, same as I with S1; in other words, if I was intended for screen 1, we can pre-process it with C12 to obtain Ip so that when Ip is viewed in screen 2 it has the same induction effects as I in screen 1.
Additional file 1 of Assessment of personality disorders in adolescents – a clinical validity and utility study of the structured interview of personality organization (STIPO)
Creators: name: Laczkovics, C.
name: Czernin, K.
name: Bründlmayer, A.
name: Zeiler, M.
name: Bangerl, W.
name: Prause, C.
name: Plener, P. L.
name: Doering, S.
name: Blüml, V.
name: Carlitscheck, J.
name: Bender, S.
name: Krischer, M.
Publisher: name: figshare
Year: 2025
Subjects: Medicine
Neuroscience
Cancer
Science Policy
Mental Health

description: Supplementary Material 1
Additional file 3 of Harmonizing measurements: establishing a common metric via shared items across instruments
Creators: name: Eekhout, Iris
name: Weber, Ann M.
name: van Buuren, Stef
Publisher: name: figshare
Year: 2024
Subjects: Medicine
Biotechnology
Biological Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified
Science Policy

description: Additional file 3: Breakpoint of misspecification in logits where the model with equategroups still outperforms the model without equate groups.
A Sationless Bikeshare Proof of Concept for College Campuses
Creators: name: Boegner, Luke
name: Cho, Yong
name: Fleming, Nicholas
name: Gilman, Tyler
name: Huang, Teng Kuan
name: King, Kyle
name: Kruder, Nathaniel
name: Lafond, Joshua
name: McLaughlin, Timothy
name: Noh, Sye Hoon
name: Poh, William
name: Ruppel, Emily
name: Wei, Libby
Publisher: name: Digital Repository at the University of Maryland
Year: 2016
Subjects: bikeshare
Gemstone Team BIKES
college campus
stationless

description: Bikeshares promote healthy lifestyles and sustainability among commuters, casual
riders, and tourists. However, the central pillar of modern systems, the bike station,
cannot be easily integrated into a compact college campus. Fixed stations lack the
flexibility to meet the needs of college students who make quick, short-distance trips.
Additionally, the necessary cost of implementing and maintaining each station prohibits
increasing the number of stations for user convenience. Therefore, the team developed a
stationless bikeshare based on a smartlock permanently attached to bicycles in the
system. The smartlock system design incorporates several innovative approaches to
provide usability, security, and reliability that overcome the limitations of a station
centered design. A focus group discussion allowed the team to receive feedback on the
early lock, system, and website designs, identify improvements and craft a pleasant user
experience. The team designed a unique, two-step lock system that is intuitive to operate
while mitigating user error. To ensure security, user access is limited through near field
ii
communications (NFC) technology connected to a mechatronic release system. The said
system relied on a NFC module and a servo working through an Arduino microcontroller
coded in the Arduino IDE. To track rentals and maintain the system, each bike is fitted
with an XBee module to communicate with a scalable ZigBee mesh network. The
network allows for bidirectional, real-time communication with a Meteor.js web
application, which enables user and administrator functions through an intuitive user
interface available on mobile and desktop. The development of an independent
smartlock to replace bike stations is essential to meet the needs of the modern college
student. With the goal of creating a bikeshare that better serves college students, Team
BIKES has laid the framework for a system that is affordable, easily adaptable, and
implementable on any university expressing an interest in bringing a bikeshare to its
campus.
Additional file 1 of Metabolic modulation to improve MSC expansion and therapeutic potential for articular cartilage repair
Creators: name: Tee, Ching Ann
name: Roxby, Daniel Ninio
name: Othman, Rashidah
name: Denslin, Vinitha
name: Bhat, Kiesar Sideeq
name: Yang, Zheng
name: Han, Jongyoon
name: Tucker-Kellogg, Lisa
name: Boyer, Laurie A.
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Hematology

description: Supplementary Material 1
title: Sorgo :
title: Directrices para la ejecución del examen de la distinción, la homogeneidad y la estabilidad.
titleType: Subtitle
Creators: name: International Union For The Protection Of New Varieties Of Plants..,
Publisher: name: International Union for the Protection of New Varieties of Plants
Year: 0
Subjects: New Varieties of Plants
Broomcorn
Group identity.
Durra
Feterita
Forage Sorghum
Grain Sorghum
Great Millet
Kaffir-corn
Milo
Shallu
Sorghum
Sweet Sorghum

description: La finalidad de estas directrices (“directrices de examen”) es elaborar los principios que figuran en la Introducción General (documento TG/1/3) y sus documentos TGP conexos, con objeto de que sirvan de orientación práctica y detallada para el examen armonizado de la distinción, homogeneidad y estabilidad (DHE) y en particular, para identificar los caracteres apropiados para el examen DHE y producir descripciones armonizadas de variedades.
Additional file 1 of Chemical analysis, antibacterial and anti-inflammatory effect of Achillea fragrantissima essential oil growing wild in Egypt
Creators: name: Tawfik, Nashwa F.
name: El-Sayed, Nashwa
name: Mahgoub, Shahenda
name: Khazaal, Mohamed T.
name: Moharram, Fatma A.
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Physiology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Supplementary Material 1.
A Mott-Schottky Analysis of Mesoporous Silicon in Aqueous Electrolyte by Electrochemical Impedance Spectroscopy
Creators: name: Brinker, Manuel
name: Huber, Patrick
Publisher: name: Deutsches Elektronen-Synchrotron, DESY, Hamburg
Year: 2024
Subjects: subject: 540

description: Nanoporosity in silicon leads to completely new functionalities of this mainstream semiconductor.In recent years, it has been shown that filling the pores with aqueous electrolytes in addition opensa particularly wide field for modifying and achieving active control of these functionalities, e.g.,for electrochemo-mechanical actuation and tunable photonics, or for the design of on-chip superca-pacitors. However, a mechanistic understanding of these new features has been hampered by thelack of a detailed characterization of the electrochemical behavior of mesoporous silicon in aqueouselectrolytes. Here, the capacitive, potential-controlled charging of the electrical double layer in amesoporous silicon electrode (pore diameter 7 nm) imbibed with perchloric acid solution is studiedby electrochemical impedance spectroscopy. Thorough measurements with detailed explanationsof the observed phenomena lead to a comprehensive understanding of the capacitive properties ofporous silicon. An analysis based on the Mott-Schottky equation allows general conclusions to bedrawn about the state of the band structure within the pore walls. Essential parameters such as theflat band potential, the doping density and the width of the space charge region can be determined.A comparison with bulk silicon shows that the flat band potential in particular is significantly al-tered by the introduction of nanopores, as it shifts from 1.4 ± 0.1 V to 1.9 ± 0.2 V. Overall, thisstudy provides a unique insight into the electrochemical processes, especially the electrical doublelayer charging, of nanoporous semiconductor electrodes.
Additional file 1 of Older patients affected by COVID-19: investigating the existence of biological phenotypes
Creators: name: Zucchelli, Alberto
name: Parigi, Marta
name: Giliani, Silvia
name: Vetrano, Davide Liborio
name: Lucente, Daniela
name: Marzetti, Emanuele
name: Calvani, Riccardo
name: Bellelli, Giuseppe
name: Marengoni, Alessandra
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy

description: Supplementary Material 1
Visual working memory enhances neural representations of matching visual input
Creators: name: Gayet, Surya
name: Paffen, Chris
name: Stigchel, Stefan Van Der
name: Christophel, Thomas
name: John-Dylan Haynes
name: Guggenmos, Matthias
name: Sterzer, Philipp
Publisher: name: F1000Research
Year: 2016

description: Visual information that is actively maintained in working memory has been shown to affect concurrent perception. One possible explanation is that working memory and sensory representations embody a common neural substrate. Here, we hypothesized that visual information maintained in working memory should enhance concurrent processing of visual input that matches the content of working memory. To test this hypothesis, 15 participants performed a delayed match to sample task during fMRI scanning. Participants were sequentially presented with two central shape stimuli, drawn from three shape categories (rectangles, ellipses and triangles), and a postcue. The postcue indicated which of the two shapes should be memorized for subsequent recall. During the retention interval a different shape was presented that either matched the category of the cued (memorized) shape or the uncued shape, or was of the hitherto unused shape category. This task-irrelevant shape stimulus was presented peripherally for one second at an unpredictable delay and location. The results revealed that those brain areas that responded to the occurrence of the shape stimulus per se (including parietal and ventral occipital cortex) showed increased activation when its shape category matched the memorized shape category, despite identical visual stimulation in mismatching trials. Next, we assessed whether the quality of the neural representation was modulated by the content of visual working memory as well. Multivariate pattern analysis allowed for decoding the shape category of the task-irrelevant shape stimulus when it matched, but not when it mismatched, the memorized shape category. Together, our results demonstrate enhanced visual processing of stimuli that match the content of working memory. This enhanced response might underlie a plethora of well-known behavioral phenomena, such as the finding that visual input that matches rather than mismatches the content of visual working memory attracts attention and eye movements, and gains preferential access to awareness.
Stab heart with pacemaker in situ
Creators: name: Mohamedsuhel Chagani
name: Vallabh, Kamil
Publisher: name: F1000Research
Year: 2016

description: Case report of a patient seen at Mitchells Plain hospital in Cape Town, South Africa. The patient had a single stab on the left side of the chest. He had a pacemaker in situ, but the reason for it could not be immediately established. Despite volume resuscitation and inotropic support, there was no improvement in blood pressure. The set heart rate of the pacemaker limited the required compensatory mechanisms to improve organ perfusion. External pacing was used to over ride the permanent pacemaker and and to improve the overall perfusion enabling us to stabilize the patient and transfer to a tertiary trauma centre for definitive management.
Additional file 2 of Older patients affected by COVID-19: investigating the existence of biological phenotypes
Creators: name: Zucchelli, Alberto
name: Parigi, Marta
name: Giliani, Silvia
name: Vetrano, Davide Liborio
name: Lucente, Daniela
name: Marzetti, Emanuele
name: Calvani, Riccardo
name: Bellelli, Giuseppe
name: Marengoni, Alessandra
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy

description: Supplementary Material 2
Limnia jakovlevi Elberg 1965
Creators: name: Vikhrev, Nikita E.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Sciomyzidae
Limnia
Limnia jakovlevi

description: Limnia jakovlevi Elberg, 1965
Fig. 10
 Neodictya jakovlevi Elberg, 1965
 Limnia jakovlevi Elberg, 1965, stat. nov.
 Type material: the holotype, male, Irkutsk (52.28 ° N, 104.24 ° E, 1848, V. Yakovlev) (ZIN). New material examined:
 RUSSIA: Khakasia Reg., Shira distr., Borets, 54.46 ° N, 90.36 ° E, 29.06.2011, K. Tomkovich, 1♂; Tuva Reg., Uyuk R., 800 m, 52.07 ° N, 94.04 ° E, 1‒ 3.07.2017, N. Vikhrev, 1♂.
DISTRIBUTION. Seems to be a rare species known from the south of Central Siberia: Irkutsk, Khakassia and Tuva regions of Russia and Inner Mongolia province of China (Li et al. 2019).
 REMARKS. This is another problematic taxon. It was previously known by the single male holotype. I was lucky to examine two more specimens of this taxon, one of them is shown in Fig. 10. In 1965, L. testacea was well forgotten and L. setosa was not yet described, so Elberg placed jakovlevi in a separate genus Neodictya Elberg, 1965. Presently, there are three possible solutions regarding the generic status of this species: to leave it in the monotypic genus Neodictya (1); to transfer it to the genus Trypetoptera (2); to transfer it to the genus Limnia (3). Similar possibilities concerning the relationship of these genera were discussed in Murphy et al. (2018: 153). As follows from the identification key given below, the species jakovlevi shares more characters with Trypetoptera punctulata Scopoli, 1763 than with L. testacea, but generally it is very similar to the latter (see Figs. 9–11). I propose leaving the monophyletic genus Trypetoptera as it is, and place the Elberg’s species in the genus Limnia for the time being seemingly artificial.
description: Published as part of Vikhrev, Nikita E., 2023, Notes on the Palaearctic fauna of Limnia (Diptera, Sciomyzidae), pp. 284-292 in Amurian Zoological Journal XV (2) on page 289, DOI: 10.33910/2686-9519-2023-15-2-284-292, http://zenodo.org/record/13258199
Temporal Lobe Connectome
Creators: name: Cappaert, N.L.M.
name: van Strien, N.M.
Publisher: name: University of Amsterdam / Amsterdam University of Applied Sciences
Year: 2022
Subjects: Biological Sciences

description: The Temporal-Lobe.com website features a detailed, interactive connectome of a small part of the brain. DOI: 10.21942/uva.19786213.v1
 The website contains: a connectome of the hippocampal formation, the parahippocampal region and the amygdala of the rat a short neuroanatomical descriptions of the hippocampal formation, the parahippocampal region and the amygdala are provided. an overview of neuroanatomical tract tracing a nomenclature dictionary to translate autor nomenclature into a standard nomenclature of brain areas.
 Literature van Strien NM*, Cappaert NLM* & Witter MP (2009). The anatomy of memory: An interactive overview of the parahippocampal-hippocampal network. Nature Reviews Neuroscience, 10 (4), 272- 282. * shared first authors Cappaert NLM, van Strien NM & Witter M.P. (2015). Hippocampal formation. In G. Paxinos (Ed.), The rat nervous system (4th ed.) (pp. 511-573). Amsterdam: Elsevier, Academic Press. Sugar J, Witter MP, van Strien NM & Cappaert NLM (2011). The retrosplenial cortex: intrinsic connectivity and connections with the (para)hippocampal region in the rat. An interactive connectome. Frontiers in Neuroinformatics, 5:7. Binicewicz FZM, van Strien NM, Wadman WJ, van den Heuvel MP, Cappaert NLM (2015) Graph analysis of the anatomical network organization of the hippocampal formation and parahippocampal region in the rat. Brain Structure and Function pp 1-15.
Supplementary document for Mid-infrared Nb₄N₃-based superconducting nanowire single photon detectors for wavelengths up to 10 μm - 5989819.pdf
Creators: name: Pan, Yiming
name: Zhou, Hui
name: ZHANG, XINGYU
name: Yu, Huiqin
name: Zhang, Lu
name: Si, Mengting
name: Li, Hao
name: YOU, Lixing
name: Wang, Zhen
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: detailed description of some measurements
Good practice guide for the measurement of the density of liquids in industry
Creators: name: Neuvonen, Pekka T.
name: Furtado, Andreia
name: Moura, Sara
name: Laky, Barbara
name: Malejczyk, Ewa
name: Elżbieta, Lenard
Publisher: name: Zenodo
Year: 2022
Subjects: density; oscillation-type densimetry; rhoLiq

description: The EMPIR project “Establishing Traceability for Liquid Density Measurements” (EMPIR 17RPT02 rhoLiq) is a European project focused on the establishment of the degree of equivalence in liquid density measurements in Europe. This good practice guide was written as a part of activity A4.1.5 of the project and is meant to enhance the quality of density measurement results obtained by laboratories and industries employing oscillation-type density meters for liquids, to achieve the traceability of the derived quantity, liquid density, back to SI base units. For more information of the project, please visit www.rholiq.org or https://www.ptb.de/empir2018/rholiq/home/.
description: The project EMPIR 17RPT02 rhoLiq has received funding from the EMPIR programme co-financed by the Participating States and from the European Union's Horizon 2020 research and innovation programme.
Religious Thought in the Poetry of Shah Abdul Latif Bhittai
Creators: name: Asadullah Mahesar
Publisher: name: International Educational Scientific Research Journal
Year: 2023

description: To interpret religion is not the responsibility of common people but they do not give up and illustrate it in their own methods. Because every man has a different approach to understanding the religion and its interpretation due to the distinctive faith and belief they belong to. Hence, it cannot be said that once's elucidation of religion is true and other's is untrue furthermore, once belief never be applied on other either by force or implementation. There are two major classes of people who interpret the religion in their own methods, one is the religious scholars who have different approaches to understand and address the religion and they stress more on the ceremonial practices of religion like fasting and praying only. However, the second class is of Sufi saints, whose analysing and comprehension of religion is contrary is that of religious scholars and they emphasize more on spiritual development rather than ritual deeds. Similarly, Shah Abdul Latif Bhittai is one of the greatest poets of Sindh, Pakistan whose poetry is acknowledged throughout the world and his way of practice and interpretation of religion is uniqueness. This dissertation will try to understand, how Shah Latif addresses the religion through his poetry and how he deals with other religion. What are the implications of Shah Latif's poetry in the present day, weather its applicable or not in modern age.
MuPeXI: A tool for prediction of neo-epitopes from tumor sequencing data
Creators: name: Anne-Mette Bjerregaard
name: Nielsen, Morten
name: Hadrup, Sine R.
name: Zoltan Szallasi
name: Eklund, Aron C.
Publisher: name: F1000Research
Year: 2016

description: Recent successes in several types of immunotherapy have demonstrated that exploitation of a patient’s own immune system is a promising strategy to eliminate cancer. Personalization of immunotherapies such as cancer vaccines and adoptive T-cell therapy will depend on identification of patient-specific neo-epitopes that can be specifically targeted. For this reason, there is a need for a tool to analyze sequencing data, extract the tumor specific peptides and predict which are likely to be immunogenic.

Here we present MuPeXI, the Mutant Peptide Extractor and Informer, a pipeline that extracts tumor mutation specific peptides and provides relevant information for peptide selection. MuPeXI takes several mutation types into account, ensuring a larger output of tumor specific peptides, including single nucleotide variations (SNVs) and indels with or without frameshift.

Tumor specific peptide extraction with MuPeXI will enable testing of neo-epitope specific T-cell activation from a population of tumor infiltration T-cells, optimizing adoptive T-cell therapy, or facilitates the optimal combination of peptides for personalized cancer vaccines to boost a patient specific immune response.
Materiały do znajomości sześciu rodzin muchówek (Diptera: Asilidae, Bombyliidae, Conopidae, Stratiomyidae, Syrphidae, Tachinidae) Powidzkiego Parku Krajobrazowego (Nizina Wielkopolsko-Kujawska, Polska)
Creators: name: Przemysław Żurawlew
name: Paweł Trzciński
name: Cezary Bystrowski
name: Łukasz Emil Mielczarek
name: Robert Żóralski
Publisher: name: Zenodo
Year: 2025
Subjects: bee flies, faunistic records, hoverflies, Powidzki Landscape Park, robber flies, soldier flies, thick-headed flies

description: Materials for the knowledge of six families of flies (Diptera: Asilidae, Bombyliidae, Conopidae, Stratiomyidae, Syrphidae, Tachinidae) of Powidzki Landscape Park (Wielkopolsko-Kujawska Lowland, Poland).During summer observations in the Powidzki Landscape Park in the years 2009-2024, 65 species from six families of flies were found. The most interesting species was Stratiomys singularior (Stratiomyidae), present on the list of endangered species in Poland, classified as VU (vulnerable). In the Syrphidae family, a rare species in Poland and Central Europe was found – Eristalis oestracea, as well as a species not yet recorded in the Greater Poland region – Helophilus affinis. In the family Tachinidae, the most important was Phania curvicauda, previously known from several locations in different parts of Poland.
Derbachilini Emeljanov et Shcherbakov 2020, trib.n.
Creators: name: Emeljanov, A. F.
name: Shcherbakov, D. E.
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Achilidae

description: Tribe Derbachilini Emeljanov et Shcherbakov, trib.n.   TYPE GENUS: Derbachile gen.n .
DIAGNOSIS. Tegmina long (tegmen length greater than body length), shallowly tectiform in repose, with achilid-like venation, shallowly convex costal margin,longitudinal branches of M and CuA, CuA2 terminating on apical margin, apically truncate clavus about 1/2 wing length, and sensory pits on C. Hind wing with ScRA long, M forking before crossveins, and 3-branched CuA. Pedicel somewhat enlarged and flattened. Subantennal ridge low or absent. Apical segment of rostrum long.
 COMPOSITION. Type genus and Achiderbe gen.n.
REMARKS. The new tribe combines the primitive structure of the hind wing and rostrum with a few characters of moderately derived Derbidae (sensory pits on C, enlarged flattened antennae). The type genus shows also the narrowed metope and primitive structure of pronotum and hind legs, and its type species, a rudimentary subantennal ridge. Such a character combination is unknown in other Derbidae (see Discussion).
description: Published as part of Emeljanov, A. F. & Shcherbakov, D. E., 2020, The first Mesozoic Derbidae (Homoptera: Fulgoroidea) from Cretaceous Burmese amber, pp. 237-246 in Russian Entomological Journal 29 (3) on page 238, DOI: 10.15298/rusentj.29.3.02, http://zenodo.org/record/13375227
The chromatic diversity of art paintings
Creators: name: Linhares, João
name: Nascimento, Sérgio
name: Montagner, Cristina
Publisher: name: F1000Research
Year: 2016

description: The chromatic diversity of natural scenes has been quantified from hyperspectral imaging data. Do artistic paintings mimic the same color diversity found in natural scenes?

The purpose of this work was to analyze and compare the chromatic diversity of natural scenes and art paintings.

Fifty images of natural scenes and 43 images of art paintings were digitized using a hyperspectral imaging system composed by a monochromatic CCD camera and a fast tunable filter capable of a spectral resolution from 400 to 720 nm in 10 nm steps. The images contained reflectance data, estimated from a grey reference with known reflectance presented at the scene at the time of acquisition. The radiance was then estimated for each pixel of the images assuming the CIE D65 illuminant. The chromatic diversity was assumed to be the number of discernible colors (NDC) in each image. The NDC was computed by representing all the image’s pixels in the CIELAB color space and by segmenting it into unitary cubes. It was assumed that all the colors that were inside the same cube could not be discernible, and by counting the number of non empty cubes the NDC was obtained.

It was found that the chromatic diversity in the form of NDC of the art paintings is different from that of natural scenes. The distributions of colors indicate that paintings are richer chromatically than natural scenes. This result suggest that artists are capable to generate richer chromatic information despite the gamut limitations imposed by the pigments used.
MILLIY UYG'ONISH DAVRI YOZMA MANBALARIDA OKKAZIONAL BIRLIKLAR
Creators: name: Abdurahmonova, Sofiya
Publisher: name: Zenodo
Year: 2025

description: Tilshunoslikda okkazionalizm hodisasi hamda unga yondosh hodisalar haqida bir qancha ma’lumotlar, izlanishlar va ilmiy xulosalar mavjud. Masalan, ushbu hodisaning tilimizga kirib kelgan yangi so‘zlardan farqli va o‘xshash jihatlari qiyosan yoritilgan ilmiy xulosalar qayd etilgan. Avvalo, okkazional birliklar haqidagi dastlabki malumotlarni Arastuning “Poetika” asarida uchratamiz. U bunday birliklarga nisbatan “yangi so‘z – hech qachon hech kim qo‘llanmagan, faqat shoir tomonidan qo‘llanilgan, o‘ylab topilgan so’zlardir’’ degan xulosalar uchraydi.
title: Solid drug dispersions and mucoadhesive formulations with poly(2-oxazolines), poly(N-(2-hydroxylpopyl)methacrylamide) and their derivatives
Creators: name: Shan, Xiaoning
Publisher: name: University of Reading
Year: 2023

description: The first chapter provides an overview on intermolecular interactions in solid dispersions of amide-containing nonionic water-soluble polymers including polyvinyl pyrrolidone (PVP), polyvinylpyrrolidone-co-vinyl acetate (PVP/VA), poly(N-vinyl caprolactam)–polyvinyl acetate–polyethylene glycol graft copolymer (Soluplus) and poly(2-oxazolines). Chapters 2 and 3 focus on the effects of structure and properties of PVP and poly(2-oxazolines) on solid dispersions. A series of poly(2-oxazolines) with equivalent degrees of polymerization were synthesized and these polymers and PVP were used to prepare solid dispersions with haloperidol or ibuprofen. Chapter 2 demonstrated that increasing the number of hydrophobic groups (-CH2- and -CH3) in the polymer resulted in greater inhibition of crystallinity of haloperidol. Interestingly, drug crystallization inhibition by poly(2- isopropyl-2-oxazoline) was lower than with its isomeric poly(2-propyl-2-oxazoline) because of the semi-crystalline nature of the former polymer. In order to explore the impacts of both polymer hydrophobicity and drug–polymer hydrogen bonding, in chapter 3, ibuprofen, a hydrophobic crystalline drug and strong hydrogen bond donor (because of its carboxylic group), was selected to prepare solid dispersions with poly(2-oxazolines) and PVP. Chapter 3 indicates the crystallinity disruption is predominantly due to hydrogen bonding between the drug molecule (ibuprofen) and the polymer. Both chapters show the crystallization inhibition was consistent with drug dissolution studies using these solid dispersions, with the exception of poly(2- propyl-2-oxazoline), which exhibited lower critical solution temperature that affected the release of haloperidol and ibuprofen. Chapter 4 and 5 investigate the mucoadhesion properties of modified poly(2-ethyl2-oxazoline) and poly(N-(2-hydroxylpropyl)methacrylamide) (PHPMA), respectively. In chapter 4, the presence of methacryloyl groups and residual amines in methacrylated poly(2-ethyl-2-oxazoline) had a strong synergistic effect on the mucoadhesive properties of these polymers. In chapter 5, the presence of maleimide groups was shown to positively affect the mucoadhesive properties of PHPMA. These poly(2-ethyl-2-oxazoline) derivatives and PHPMA derivatives have significant potential as mucoadhesive materials for formulation of dosage forms for nasal drug delivery. The final chapter discusses the general conclusions and possible future work. The poly(2-oxazolines) and functionalized derivatives appear to offer great potential in pharmaceutical applications
Additional file 1 of Carry-over effects of Bacillus thuringiensis on tolerant Aedes albopictus mosquitoes
Creators: name: Bahrami, Romina
name: Quaranta, Stefano
name: Perdomo, Hugo D.
name: Bonizzoni, Mariangela
name: Khorramnejad, Ayda
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified

description: Additional file 1: Figure S1. Rarefaction analyses to ensure the unbiased comparisons of species richness and diversity metrics across all samples. The rarefaction depth of 4000 sequences was chosen on the basis of the rarefaction curves. Samples with a rarefaction depth lower than this threshold were discarded from diversity analysis.
Preventing Diabetes on a Budget
Creators: name: Connolly, Sarah
name: Adegoye, Grace
name: Dalleck, Angie
Publisher: name: Zenodo
Year: 2025
Subjects: Type II Diabetes
Elderly
obesity
Prevention
Nutrition

description: Type 2 diabetes is one of the unique challenges that is becoming an epidemic among older adults due to its high prevalence, particularly among people with existing comorbidities, including obesity. According to the Centers for Disease Control and Prevention, over 37 million Americans have diagnoses of type 2 diabetes. However, management and treatment become more challenging due to reduced financial capacity among the demographic population. This educational material, Preventing Diabetes on a Budget, is designed to educate Wellness Elevated clients, primarily senior citizens aged 60 and older living in Gunnison, Colorado. It aims to promote healthy eating on a smart budget and prevent nutrition-related chronic diseases such as Diabetes, obesity, metabolic disorders like high blood pressure, and cardiovascular disease. 

This material is one of the project deliverables in the Nutrition Education and Counseling Class (NTR 320), Nutrition Science Program, Department of Recreation, Exercise, and Sport Sciences, Western Colorado University. The project aims to equip our students with high-impact practices emphasizing effective communication, cultural competence, information literacy, creativity, critical thinking, and collaborative learning. The Wellness Elevated program includes nutrition assessments, exercise, interventions, evaluations, and counseling for seniors with preexisting conditions, all conducted under the careful guidance and supervision of experienced faculty members.
The Benefits of Resistance Training for Senior Citizens Aged 60 and Above
Creators: name: Lieck, Trevin
name: Adegoye, Grace
name: Dalleck, Angie
Publisher: name: Zenodo
Year: 2025
Subjects: subject: Physical Fitness
subject: Resistance training
subject: Health Promotion
subject: health
subject: geriatrics

description: The Benefits of Resistance Training, is an infographic designed by the Nutrition and Exercise and Sport Sciences major students from the Department of Recreation, Exercise, and Sport Science, Western Colorado University, to educate and encourage Wellness Elevated clients, primarily senior citizens aged 60 and older living in Gunnison, Colorado. It aims to promote physical activity and highlight the importance of incorporating strength exercises into fitness routines in preventing aging-related health challenges such as reduced bone density and cardiovascular and metabolic-related diseases among this demographic.

This educational material is a project deliverable in the Nutrition Education and Counseling Class (NTR 320). It aims to equip the students with High-Impact Practices, with emphasis on effective communication, cultural competence, information literacy, creativity, critical thinking, and collaborative learning. 

The Wellness Elevated program includes nutrition assessments, exercise, interventions, evaluations, and counseling for seniors with preexisting conditions, all conducted under faculty supervision.
Derbachile Emeljanov et Shcherbakov 2020, gen.n.
Creators: name: Emeljanov, A. F.
name: Shcherbakov, D. E.
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Derbidae
Derbachile

description: Genus Derbachile Emeljanov et Shcherbakov, gen.n.
 TYPE SPECIES: Derbachile hochae Emeljanov et Shcherbakov, sp.n .
 DIAGNOSIS. Small, slender. Tegmen with achilid-like venation, elongated, much widened distally, clavus less than 1/2 wing length. C with sensory pits at base and along anterior margin; ScR and M forming short stalk beyond basal cell; ScR forking earlier than CuA; stigmal cell darkened; RA2 with short fork, RA2a recurrent, RP simple; M with 4 terminations, MA forking much earlier than MP, medial cell narrow, medial apical cells long; CuA1 and CuA2 connected by crossvein icua distal to 2m cu, CuA1 bent at 2m-cu and icua, 1st procubital cell long and wide distally; CuA2 distant from posterior margin and reaching apical margin; crossvein on clavus between CuP and Pcu. Hind wing broad, RP simple, M forking before crossveins r-m and m-cu, CuA with 3 terminations. Pedicel enlarged, more or less flattened. Metope narrow dorsally. Lateral ocelli present. Subantennal ridge low or absent. Rostrum surpassing mid coxae, apical segment more than thrice longer than wide. Pronotum with strongly elevated, long, triangular, tricarinate disc occupying almost 1/2 width. Mesonotum with lateral discal carinae strongly converging anteriorly, median carina weak or absent. Legs long, slender. Hind tibia with 2–3 lateral teeth (1st minute, at base) and 8–11 apical teeth, tarsomere I with 6–9, II with 4–6 apical teeth, without discernible subapical setae.
 COMPOSITION. Type species and D. aschei sp.n.
 ETYMOLOGY. Free combination of generic names Derbe and Achilus; gender feminine.
description: Published as part of Emeljanov, A. F. & Shcherbakov, D. E., 2020, The first Mesozoic Derbidae (Homoptera: Fulgoroidea) from Cretaceous Burmese amber, pp. 237-246 in Russian Entomological Journal 29 (3) on page 238, DOI: 10.15298/rusentj.29.3.02, http://zenodo.org/record/13375227
Octaplex use in an emergency setting
Creators: name: Mathan Thevathasan
name: Uzair Adam
name: Thiagarajan Jaiganesh
Publisher: name: F1000Research
Year: 2016

description: Background:

Octaplex, a human prothrombin complex concentrate which contains factors II, VII, IX, X, Protein C & S has replaced fresh frozen plasma in reversing the effects of warfarin in major haemorrhage. Guidelines recommend the use of Octaplex (maximum dose of 3000IU / 120mL) with Vitamin K in the treatment of major, life-threatening bleeding when rapid and complete warfarin reversal is required.

Data Collection:

A list of all requests for Octaplex use from Jan-Dec 2014 from the Emergency Department (ED) was obtained from the Haematology department and analysed using Electronic Patient Records.

Data Analysis:

There were 99 requests for Octaplex from the ED. 91 of 99 patients were on warfarin, 4 were on novel oral anti-coagulants (NOAC) and 4 were not on any anticoagulants. 35 of these patients required reversal due to non-traumatic cerebrovascular accidents, 20 due to trauma including falls, 10 gastrointestinal bleeds and 6 “spontaneous” bleeds. Only 18 of the 99 patients had an INR within therapeutic range at the time of presentation. 9 of the 99 patients had INRs greater than 8. Only 65 of 99 had INRs documented pre- and post-Octaplex. 63 of 65 cases full INR reversal (INR < 1.5 after use of Octaplex) were achieved.

Conclusion:

Warfarin intake necessitated the maximum ED use of Octaplex. Octaplex was effective in reversing the effects of warfarin in 97% of our patients and thus forms an important component of reducing haemorrhage in these patients. Although no documented clinical efficacy data, Octaplex appears to play a role in the management of major haemorrhage in patients on NOAC’s.