cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1 of Identification of gene biomarkers with expression profiles in patients with allergic rhinitis
Creators: name: Hao, Yun
name: Wang, Boqian
name: Zhao, Jinming
name: Wang, Ping
name: Zhao, Yali
name: Wang, Xiangdong
name: Zhao, Yan
name: Zhang, Luo
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Physiology
subject: Pharmacology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Figure S1. Flowchart of our study to identify potential gene markers in AR patients. Table S1. The raw mean Ct value of the nasal brush samples and the blood samples from AR patients and healthy controls. Table S2. The RNA concentration of the nasal brush samples and the blood samples from AR patients and healthy controls.
Cosmic rays at ultra high energies (Neutrinos!)
Creators: name: Ahlers, Markus
name: Ringwald, Andreas
name: Tu, Huitzu
Publisher: name: arXiv
Year: 2005
Subjects: subject: Astrophysics (astro-ph)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Resonant photopion production with the cosmic microwave background predicts a suppression of extragalactic protons above the famous Greisen-Zatsepin-Kuzmin cutoff at about E_{GZK} ~ 5 x 10^10 GeV. Current cosmic ray data measured by the AGASA and HiRes Collaborations do not unambiguously confirm the GZK cutoff and leave a window for speculations about the origin and chemical composition of the highest energy cosmic rays. In this work we analyze the possibility of strongly interacting neutrino primaries and derive model-independent quantitative requirements on the neutrino-nucleon inelastic cross section for a viable explanation of the cosmic ray data. Search results on weakly interacting cosmic particles from the AGASA and RICE experiments are taken into account simultaneously. Using a flexible parameterization of the inelastic neutrino-nucleon cross section we find that a combined fit of the data does not favor the Standard Model neutrino-nucleon inelastic cross section, but requires, at 90 % confidence level, a steep increase within one energy decade around E_{GZK} by four orders of magnitude. We illustrate such an enhancement within some extensions of the Standard Model. The impact of new cosmic ray data or cosmic neutrino search results on this scenario, notably from the Pierre Auger Observatory soon, can be immediately evaluated within our approach.
description: 11 pages, 10 figures, modified autart.cls included
ИНЖЕНЕРНЫЕ РЕШЕНИЯ, ПРИНЯТЫЕ ПРИ СТРОИТЕЛЬСТВЕ ЛОГИСТИЧЕСКОГО ЦЕНТРА «АДЫГЕЯ-2»
Creators: name: Бабаченко В. А.
name: Пшидаток С. К.
Publisher: name: Colloquium-journal
Year: 2019
Subjects: строительство
общественное здание
проектировочные решения
распредели-тельный Логистический центр
обслуживающий персонал
организация деятельности

description: В статье рассмотрены инженерные решения, принятые при строительстве оптово-распредели-тельных складских комплексов. Определены основные задачи, решаемые при проектировании обществен-ных зданий на примере проекта строительства Логистического центра «Адыгея – 2», расположенного на территории Республики Адыгея.
Holographic superconductor on a novel insulator
Creators: name: Ling, Yi
name: Liu, Peng
name: Wu, Jian-Pin
name: Wu, Meng-He
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We construct a holographic superconductor model, based on a gravity theory, which exhibits novel metal-insulator transitions. We investigate the condition for the condensation of the scalar field over the parameter space, and then focus on the superconductivity over the insulating phase with a hard gap, which is supposed to be Mott-like. It turns out that the formation of the hard gap in the insulating phase benefits the superconductivity. This phenomenon is analogous to the fact that the pseudogap phase can promote the pre-pairing of electrons in high $T_c$ cuprates. We expect that this work can shed light on understanding the mechanism of high Tc superconductivity from the holographic side.
description: 9 pages, 16 figures
$K \to ππ$ Decays with Domain Wall Fermions: Towards Physical Results
Creators: name: Mawhinney, Robert D.
Publisher: name: arXiv
Year: 2000
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We are using domain wall fermions to study $K \to ππ$ matrix elements by measuring $K \to π$ and $K \to 0$ matrix elements on the lattice and employing chiral perturbation theory to relate these to the desired physical result. The residual chiral symmetry breaking of domain wall fermions with a finite extent in the fifth dimension impacts these measurements. Using the Ward-Takahashi identities, we investigate residual chiral symmetry breaking effects for divergent quantities and study pathologies of the quenched approximation for small quark mass. We then discuss the $ΔS = 1$ operator $O_2$, where chiral symmetry is vital for the subtraction of unphysical effects.
description: 4 pages, 3 figures, Lattice 2000 (Hadronic Matrix Elements), RBC Collaboration, corrected equations 2 and 7
СРАВНИТЕЛЬНЫЙ АНАЛИЗ СОВРЕМЕННЫХ СИСТЕМ ОБНАРУЖЕНИЯ ВТОРЖЕНИЙ
Creators: name: Анчишкин А. П.
Publisher: name: Colloquium-journal
Year: 2019
Subjects: система обнаружения вторжений
система предотвращения вторжений
сетевая атака
метод обнаружения сетевой атаки.

description: Угроза сетевых атак – одна из актуальных угроз информационной безопасности. Для её предотвра-щения необходимо использование специализированного программного обеспечения – системы обнаруже-ния вторжений. В статье приводится методика сравнения ПО таких систем, обоснование выбора ха-рактеристик для сравнения и результаты проведения сравнения на основе полученной методики. Целью статьи является выявление распространённых методов обнаружения сетевых атак и выбор наиболее эффективного на данный момент решения. В результате сравнительного анализа выявилось несколько лучших продуктов: ПО с открытым исходным кодом Snort и разработка Фонда Открытой Информаци-онной Безопасности Suricata.
An extension of the Cayley-Hamilton theorem to the case of supermatrices
Creators: name: Urrutia, L. F.
name: Morales, N.
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Starting from the expression for the superdeterminant of $ (xI-M)$, where $M$ is an arbitrary supermatrix , we propose a definition for the corresponding characteristic polynomial and we prove that each supermatrix satisfies its characteristic equation. Depending upon the factorization properties of the basic polynomials whose ratio defines the above mentioned superdeterminant we are able to construct polynomials of lower degree which are also shown to be annihilated by the supermatrix.
description: 14 pages, plain TEX
An advanced N-body model for interacting multiple stellar systems
Creators: name: Brož, M.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: We construct an advanced model for interacting multiple stellar systems in which we compute all trajectories with a numerical N-body integrator, namely the Bulirsch--Stoer from the SWIFT package. We can then derive various observables: astrometric positions, radial velocities, minima timings (TTVs), eclipse durations, interferometric visibilities, closure phases, synthetic spectra, spectral-energy distribution, and even complete light curves. We use a modified version of the Wilson--Devinney code for the latter, in which the instantaneous true phase and inclination of the eclipsing binary are governed by the N-body integration. If one has all kinds of observations at disposal, a joint $χ^2$ metric and an optimisation algorithm (a~simplex or simulated annealing) allows to search for a global minimum and construct very robust models of stellar systems. At the same time, our N-body model is free from artefacts which may arise if mutual gravitational interactions among all components are not self-consistently accounted for. Finally, we present a number of examples showing dynamical effects that can be studied with our code and we discuss how systematic errors may affect the results (and how to prevent this from happening).
On Non-Abelian Thomas-Fermi Screening
Creators: name: Alexanian, G.
name: Nair, V. P.
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The Thomas-Fermi screening of non-Abelian gauge fields by fermions or screening of gluon fields in quark matter is discussed. It is described by an effective mass term which is, as with hard thermal loops, related to the eikonal for a Chern-Simons theory and the Wess-Zumino-Witten action.
description: 7 pages, plain Tex, no figures; one reference added, note added at the end
Additional file 4: of 70ProPred: a predictor for discovering sigma70 promoters based on combining multiple features
Creators: name: Wenying He
name: Cangzhi Jia
name: Yucong Duan
name: Zou, Quan
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics

description: Table S3. Comparison prediction results of different nTrees. (DOC 42 kb)
Limits on Enhanced Radio Wave Scattering by Supernova Remnants
Creators: name: Spitler, Laura G.
name: Spangler, Steven R.
Publisher: name: arXiv
Year: 2005
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We report multifrequency observations with the NRAO Very Long Baseline Array (VLBA) of the compact radio sources J0128+6306 and J0547+2721, which are viewed through the supernova remnants G127.1+0.5 and S147, respectively. Observations were made at frequencies of 1.427, 1.667, 2.271, and 4.987 GHz. The lines of sight to these sources pass through the shock wave and upstream and downstream turbulent layers of their respective supernova remnants, and thus might detect cosmic-ray generated turbulence produced during the Fermi acceleration process. For both sources, we detect interstellar scattering, characterized by a component of the angular size which scales as the square of the observing wavelength. The magnitude of the scattering is characterized by an effective scattering angular size theta_S0 at a frequency of 1 GHz of 13.2 +/- 2.6 milliarcseconds (mas) for J0128+6306 and 6.7 +/- 2.2 mas for J0547+2721. These angular sizes are consistent with the ``incidental'' scattering for any line of sight out of the galaxy at similar galactic latitudes and longitudes. There is therefore no evidence for enhanced turbulence at these supernova remnants. We establish upper limits to the supernova remnant-associated scattering measures of 8.1-14.8 m^-20/3-pc for J0128+6306 and 3.0 m^-20/3-pc for J0547+2721.
description: To be published in ApJ, 25 pages, 4 figures, 2 tables
Three-Dimensional Numerical Modeling of Shear Stimulation of Naturally Fractured Reservoirs
Creators: name: Ucar, Eren
name: Berre, Inga
name: Keilegavlen, Eirik
Publisher: name: arXiv
Year: 2017
Subjects: subject: Geophysics (physics.geo-ph)
subject: Numerical Analysis (math.NA)
subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: Shear dilation based hydraulic stimulations enable exploitation of geothermal energy from reservoirs with inadequate initial permeability. While contributing to enhancing the reservoir's permeability, hydraulic stimulation processes may lead to undesired seismic activity. Here, we present a three dimensional numerical model aiming to increase understanding of this mechanism and its consequences. The fractured reservoir is modeled as a network of explicitly represented large scale fractures immersed in a permeable rock matrix. The numerical formulation is constructed by coupling three physical processes: fluid flow, fracture deformation, and rock matrix deformation. For flow simulations, the discrete fracture matrix model is used, which allows the fluid transport from high permeable conductive fractures to the rock matrix and vice versa. The mechanical behavior of the fractures is modeled using a hyperbolic model with reversible and irreversible deformations. Linear elasticity is assumed for the mechanical deformation and stress alteration of the rock matrix. Fractures are modeled as lower dimensional surfaces embodied in the domain, subjected to specific governing equations for their deformation along the tangential and normal directions. Both the fluid flow and momentum balance equations are approximated by finite volume discretizations. The new numerical model is demonstrated considering a three dimensional fractured formation with a network of 20 explicitly represented fractures. The effects of fluid exchange between fractures and rock matrix on the permeability evolution and the generated seismicity are examined for test cases resembling realistic reservoir conditions.
Advanced maternal age compromises fetal growth and induces sex-specific changes in placental phenotype in rats.
Creators: name: Napso, Tina
name: Hung, Yin-Po
name: Davidge, Sandra T
name: Care, Alison S
name: Sferruzzi-Perri, Amanda N
Publisher: name: Apollo - University of Cambridge Repository
Year: 2019

description: Advanced maternal age is associated with an increased risk of pregnancy complications. It programmes sex-specific cardiovascular dysfunction in rat offspring, however the intrauterine mechanisms involved remain unknown. This study in the rat assessed the impact of advanced maternal age on placental phenotype in relation to the growth of female and male fetuses. We show that relative to young (3-4 months) dams, advanced maternal age (9.5-10 months) compromises growth of both female and male fetuses but affects the placental phenotype sex-specifically. In placentas from aged versus young dams, the size of the placental transport and endocrine zones were increased and expression of Igf2 (+41%) and placental lactogen (Prl3b1: +59%) genes were upregulated in female, but not male fetuses. Placental abundance of IGF2 protein also decreased in the placenta of males only (-95%). Moreover, in placentas from aged versus young dams, glucocorticoid metabolism (11β-hsd2: +63% and 11β-hsd1: -33%) was higher in females, but lower in males (11β-hsd2: -50% and 11β-hsd1: unaltered). There was however, no change in the placental abundance of 11β-HSD2 protein in aged versus young dams regardless of fetal sex. Levels of oxidative stress in the placenta were increased in female and male fetuses (+57% and +90%, respectively) and apoptosis increased specifically in the placenta of males from aged rat dams (+700%). Thus, advanced maternal age alters placental phenotype in a sex-specific fashion. These sexually-divergent changes may play a role in determining health outcomes of female and male offspring of aged mothers.
The standard model and parity conservation
Creators: name: Xue, She-Sheng
Publisher: name: arXiv
Year: 2000
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: On the basis of previous work on chiral gauged fermions on a lattice, we discuss the lattice-regularization of the standard model by introducing two Weyl fields interacting with quarks and leptons. These interactions form massive bound states to gauge-invariantly decouple doublers at high energies and these bound states dissolve into their constituents at low energies. No any hard spontaneous symmetry breakings occur at the lattice scale π/a. As a consequence, the gauge symmetries of the standard model are realized by both massive vectorlike spectra at high energies and massless chiral spectra at low energies. Such a scenario is consistent with the gauge-anomaly cancelation, flavor-singlet anomaly and Witten's anomaly. These studies predict that the parity symmetry must be restored at high energies.
description: 4 pages, latex and espcrc2.sty, Lattice2000 and to appear in Nucl. Phys. (Suppl.) B
Additional file 1: of Palikur traditional roundwood construction in eastern French Guiana: ethnobotanical and cultural perspectives
Creators: name: ClĂŠmence Ogeron
name: Odonne, Guillaume
name: Cristinoi, Antonia
name: Engel, Julien
name: Grenand, Pierre
name: BeauchĂŞne, Jacques
name: Clair, Bruno
name: Davy, Damien
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Marine Biology
subject: Science Policy

description: Full list of ethnospecies and their botanic correspondences. (DOCX 217 kb)
Limitations of rotating-wave approximation in magnetic resonance: Characterization and elimination of the Bloch-Siegert shift in magneto-optics
Creators: name: Sudyka, Julia
name: Pustelny, Szymon
name: Gawlik, Wojciech
Publisher: name: arXiv
Year: 2017
Subjects: subject: Atomic Physics (physics.atom-ph)
subject: FOS: Physical sciences

description: We present investigations of radio-frequency resonances observed in a rubidium vapor. With measurements of a systematic shift of radio-frequency resonances, induced by an off-resonance component of an oscillating field (the Bloch-Siegert shift), we demonstrate limitations of the rotating-wave approximation. Experimental results are supported with numerical calculations, reproducing all features of the observed signals. Based on the studies, we develop experimental scheme free from the problem. By liberating the measurements from a systematic error (the resonance shift), the new approach will increase accuracy of spectroscopic measurements and magnetic-field detection.
description: 6 pages, 4 figures
Response to the Comment by G. Emch on Projective Group Representations in Quaternionic Hilbert Space
Creators: name: Adler, S. L.
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We discuss the differing definitions of complex and quaternionic projective group representations employed by us and by Emch. The definition of Emch (termed here a strong projective representation) is too restrictive to accommodate quaternionic Hilbert space embeddings of complex projective representations. Our definition (termed here a weak projective representation) encompasses such embeddings, and leads to a detailed theory of quaternionic, as well as complex, projective group representations.
description: 8 pages, Revtex, no figures
Polarization preserving quantum nondemolition photodetector
Creators: name: Kapale, K. T.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: A polarization preserving quantum nondemolition photodetector is proposed based on nonlinearities obtainable through quantum coherence effects. An atomic level scheme is devised such that in the presence of strong linearly polarized drive field a coherent weak probe field acquires a phase proportional to the number of photons in the signal mode immaterial of its polarization state. It is also shown that the unavoidable phase-kicks resulting due to the measurement process are insensitive to the polarization state of the incoming signal photon. It is envisioned that such a device would have tremendous applicability in photonic quantum information proposals where quantum information in the polarization qubit is to be protected.
title: ADCO, Sixième cartulaire de Saint-Étienne de Dijon (1662), Cart. 30 (G 133), 441 folios, f. 357
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Laboratoire de Médiévistique Occidentale de Paris
subject: cartulaire
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: LaMOP

description: Sixième cartulaire de Saint-Étienne de Dijon (1662), Archives départementales de la Côte-d'Or, Cart. 30 (G 133), 441 folios, f. 357, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Sixième cartulaire de Saint-Étienne de Dijon (1662), Archives départementales de la Côte-d'Or, Cart. 30 (G 133), 441 folios, f. 357, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https://manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
Additional file 2: of Combined Protocol for Acute Malnutrition Study (ComPAS) in rural South Sudan and urban Kenya: study protocol for a randomized controlled trial
Creators: name: Bailey, Jeanette
name: Lelijveld, Natasha
name: Marron, Bethany
name: Onyoo, Pamela
name: Ho, Lara
name: Manary, Mark
name: AndrĂŠ Briend
name: Opondo, Charles
name: Kerac, Marko
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Sociology
subject: FOS: Sociology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: FOS: Biological sciences
subject: Computational Biology

description: SPIRIT checklist. (DOCX 52Â kb)
Additional file 1 of Enhancement of polyhydroxyalkanoate production by co-feeding lignin derivatives with glycerol in Pseudomonas putida KT2440
Creators: name: Xu, Zhangyang
name: Pan, Chunmei
name: Li, Xiaolu
name: Hao, Naijia
name: Zhang, Tong
name: Gaffrey, Matthew J.
name: Pu, Yunqiao
name: Cort, John R.
name: Ragauskas, Arthur J.
name: Qian, Wei-Jun
name: Yang, Bin
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Additional file 1: Figure S1. GC–MS spectra of PHA monomers from the 72 h’ sample under different carbon feeding strategies. Figure S2. Polyhydroxyalkanoate (PHA) chemical structure. Figure S3. HMBC spectra of PHA polymer of glycerol 10 g L−1 (a) and glycerol 9.5 g L−1 + Benzoate 0.5 g L−1 at 72 h (b). Figure S4. COSY (a) and HSQC (b) spectra of PHA polymer of glycerol 10 g L−1 at 72 h. Figure S5. 1H NMR spectra of fermentation supernatant at 72 h with mixed or solo carbon sources. Figure S6. 1H NMR spectra of intracellular extracts of P. putida KT2440 at 72 h with mixed or solo carbon sources. Figure S7. 13C NMR spectra of intracellular extracts of P. putida KT2440 at 72 h with mixed or solo carbon sources. Figure S8. 31P NMR spectra of intracellular extracts of P. putida KT2440 at 72 h with mixed or solo carbon sources. Table S1. Carbon numbers of PHA monomers in HMBC NMR. Table S2. Detailed chemical shifts (ppm) from COSY/HSQC/HMBC NMR spectra of PHA monomers. Table S3. 1H, 13C, and 31P chemical shifts of referenced compounds, retrieved from the Human Metabolome Database (HMDB) [96] or recorded at 500 MHz in D2O at 25 °C. Table S4. Intracellular NAD(P)H and NAD(P)+ contents (µmol·gCDW−1) with glycerol and benzoate co-metabolism.
Combined effects of age and BMI are related to altered cortical thickness in adolescence and adulthood.
Creators: name: Westwater, Margaret L
name: Vilar-López, Raquel
name: Ziauddeen, Hisham
name: Verdejo-García, Antonio
name: Fletcher, Paul C
Publisher: name: Apollo - University of Cambridge Repository
Year: 2019
Subjects: Obesity
Adolescent Development
Impulsivity
Structural Mri

description: Overweight and obesity are associated with functional and structural alterations in the brain, but how these associations change across critical developmental periods remains unknown. Here, we examined the relationship between age, body mass index (BMI) and cortical thickness (CT) in healthy adolescents (n = 70; 14-19 y) and adults (n = 75; 25-45 y). We also examined the relationship between adiposity, impulsivity, measured by delay discounting (DD), and CT of the inferior frontal gyrus (IFG), a region key to impulse control. A significant age-by-BMI interaction was observed in both adolescents and adults; however, the direction of this relationship differed between age groups. In adolescents, increased age-adjusted BMI Z-score attenuated age-related CT reductions globally and in frontal, temporal and occipital regions. In adults, increased BMI augmented age-related CT reductions, both globally and in bilateral parietal cortex. Although DD was unrelated to adiposity in both groups, increased DD and adiposity were both associated with reduced IFG thickness in adolescents and adults. Our findings suggest that the known age effects on CT in adolescence and adulthood are moderated by adiposity. The association between weight, cortical development and its functional implications would suggest that future studies of adolescent and adult brain development take adiposity into account.
The Perfect Laplace Operator for Non-Trivial Boundaries
Creators: name: Hauswirth, S.
Publisher: name: arXiv
Year: 2000
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: The application of Renormalization Group (RG) methods to find perfect discretizations of partial differential equations is a promising but little investigated approach. We calculate the classically perfect fixed-point Laplace operator for boundaries of non-trivial shape analytically and numerically and present a parametrization that can be used for solving the Poisson equation.
description: Poster for Lattice 2000 (Improvement), 5 pages
A Gluing Theorem for the Kapustin-Witten Equations with a Nahm Pole
Creators: name: He, Siqi
Publisher: name: arXiv
Year: 2017
Subjects: subject: Differential Geometry (math.DG)
subject: FOS: Mathematics
subject: 53C21

description: In the present paper, we establish a gluing construction for the Nahm pole solutions to the Kapustin-Witten equations over manifolds with boundaries and cylindrical ends. Given two Nahm pole solutions with some convergence assumptions on the cylindrical ends, we prove that there exists an obstruction class for gluing the two solutions together along the cylindrical end. In addition, we establish a local Kuranishi model for this gluing picture. As an application, we show that over any compact four-manifold with $S^3$ or $T^3$ boundary, there exists a Nahm pole solution to the obstruction perturbed Kapustin-Witten equations. This is also the case for a four-manifold with hyperbolic boundary under some topological assumptions.
description: 58 pages, 6 figures
Many-body quantum dynamics of polarisation squeezing in optical fibre
Creators: name: Corney, J. F.
name: Drummond, P. D.
name: Heersink, J.
name: Josse, V.
name: Leuchs, G.
name: Andersen, U. L.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We report new experiments that test quantum dynamical predictions of polarization squeezing for ultrashort photonic pulses in a birefringent fibre, including all relevant dissipative effects. This exponentially complex many-body problem is solved by means of a stochastic phase-space method. The squeezing is calculated and compared to experimental data, resulting in excellent quantitative agreement. From the simulations, we identify the physical limits to quantum noise reduction in optical fibres. The research represents a significant experimental test of first-principles time-domain quantum dynamics in a one-dimensional interacting Bose gas coupled to dissipative reservoirs.
description: 4 pages, 4 figures
Context Dependent Role of Type 2 Innate Lymphoid Cells in Allergic Skin Inflammation.
Creators: name: Rafei-Shamsabadi, David A
name: Klose, Christoph S N
name: Halim, Timotheus Y F
name: Tanriver, Yakup
name: Jakob, Thilo
Publisher: name: Apollo - University of Cambridge Repository
Year: 2019
Subjects: Allergic Contact Dermatitis
Atopic Dermatitis
Innate Lymphoid Cells
Counter Regulation
Immune Crosstalk

description: The discovery of innate lymphoid cells (ILC) has profoundly influenced the understanding of innate and adaptive immune crosstalk in health and disease. ILC and T cells share developmental and functional characteristics such as the lineage-specifying transcription factors and effector cytokines, but importantly ILC do not display rearranged antigen-specific receptors. Similar to T cells ILC are subdivided into 3 different helper-like subtypes, namely ILC1-3, and a killer-like subtype comprising natural killer (NK) cells. Increasing evidence supports the physiological relevance of ILC, e.g., in wound healing and defense against parasites, as well as their pathogenic role in allergy, inflammatory bowel diseases or psoriasis. Group 2 ILC have been attributed to the pathogenesis of allergic diseases like asthma and atopic dermatitis. Other inflammatory skin diseases such as allergic contact dermatitis are profoundly shaped by inflammatory NK cells. This article reviews the role of ILC in allergic skin diseases with a major focus on ILC2. While group 2 ILC are suggested to contribute to the pathogenesis of type 2 dominated inflammation as seen in atopic dermatitis, we have shown that lack of ILC2 in type 1 dominated contact hypersensitivity results in enhanced inflammation, suggesting a regulatory role of ILC2 in this context. We provide a concept of how ILC2 may influence context dependent the mutual counterbalance between type I and type II immune responses in allergic skin diseases.
Additional file 21: of Clustering of Pan- and Core-genome of Lactobacillus provides Novel Evolutionary Insights for Differentiation
Creators: name: Inglin, Raffael
name: Meile, Leo
name: Stevens, Marc
Publisher: name: figshare
Year: 2018
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Pan- and core-genome evolution of L. rhamnosus. A Evolution of the pan-genome for L. rhamnosus. After 20 included genomes, the pan-genome is closed. B Evolution of the core-genome for L. rhamnosus. Order of calculation was randomized for 51 sets, each represented with a single point. (PDF 1978 kb)
Origin of the correlations between exit times in pedestrian flows through a bottleneck
Creators: name: Nicolas, Alexandre
name: Touloupas, Ioannis
Publisher: name: arXiv
Year: 2017
Subjects: subject: Physics and Society (physics.soc-ph)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: Robust statistical features have emerged from the microscopic analysis of dense pedestrian flows through a bottleneck, notably with respect to the time gaps between successive passages. We pinpoint the mechanisms at the origin of these features thanks to simple models that we develop and analyse quantitatively. We disprove the idea that anticorrelations between successive time gaps (i.e., an alternation between shorter ones and longer ones) are a hallmark of a zipper-like intercalation of pedestrian lines and show that they simply result from the possibility that pedestrians from distinct 'lines' or directions cross the bottleneck within a short time interval. A second feature concerns the bursts of escapes, i.e., egresses that come in fast succession. Despite the ubiquity of exponential distributions of burst sizes, entailed by a Poisson process, we argue that anomalous (power-law) statistics arise if the bottleneck is nearly congested, albeit only in a tiny portion of parameter space. The generality of the proposed mechanisms implies that similar statistical features should also be observed for other types of particulate flows.
Support Needs Approach for Patients (SNAP) tool: a validation study.
Creators: name: Gardener, A Carole
name: Ewing, Gail
name: Mendonca, Silvia
name: Farquhar, Morag
Publisher: name: Apollo - University of Cambridge Repository
Year: 2019
Subjects: Qualitative Research
Chronic Airways Disease
Respiratory Medicine (See Thoracic Medicine)

description: OBJECTIVES:Patient-identified need is key to delivering holistic, supportive, person-centred care, but we lack tools enabling patients to express what they need to manage life with a long-term condition. The Support Needs Approach for Patients (SNAP) tool was developed to enable patients with advanced chronic obstructive pulmonary disease (COPD) identify and express their unmet support needs to healthcare professionals (HCPs), but its validity is unknown. This study aimed to establish face, content and criterion validity of the SNAP tool. DESIGN:Two-stage mixed-methods study involving patients with advanced COPD and their carers. Stage 1: Face and content validity assessed though focus groups involving patients and carers considering appropriateness, relevance and completeness of the SNAP tool. Data were analysed using conventional content analysis. Stage 2: Content and criterion validity assessed in a postal survey through patient self-completion of the SNAP tool and disease impact measures (Chronic Respiratory Questionnaire, COPD Assessment Test, and Hospital Anxiety and Depression Scale). Content validity assessed using summary statistics; criterion validity via correlations between tool items and impact measures. SETTINGS AND PARTICIPANTS:Two hundred and forty patients and carers participated. Stage 1 patient and informal carer participants were recruited from two primary care practices and Stage 2 patients from 28 practices. Participating practices located in the East of England were recruited via the NIHR Clinical Research Network: Eastern. RESULTS:Patients and carers found the tool patient-friendly and comprehensive, with potential clinical utility. No tool items were redundant. Clear correlations were found between tool items and the majority of items in the impact measures. CONCLUSIONS:The SNAP tool has good face, content and criterion validity. It has potential to support the delivery of holistic, supportive, person-centred care by enabling patients to identify and express their unmet support needs to HCPs.
New Algorithm for Tensor Calculation in Field Theories
Creators: name: Ichinose, Shoichi
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Tensor calculation of suffix-contraction is carried out by a C-program. Tensors are represented graphically, and the algorithm makes use of the topology of graphs. Classical and quantum gravity, in the weak-field perturbative approach, is a special interest. Examples of the leading order calculation of some general invariants such as $R_{\mn\ls}R^{\mn\ls}$ are given. Application to Weyl anomaly calculation is commented.
description: 27 pages, 17 figures, epsbox.sty included, to appear in Int.Jour.Mod.Phys.C
Additional file 1 of Improved production of germacrene A, a direct precursor of ß-elemene, in engineered Saccharomyces cerevisiae by expressing a cyanobacterial germacrene A synthase
Creators: name: Zhang, Weixin
name: Guo, Junqi
name: Wang, Zheng
name: Li, Yanwei
name: Meng, Xiangfeng
name: Shen, Yu
name: Liu, Weifeng
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Marine Biology

description: Additional file 1: Figure S1. Identification of germacrene A by GC-MS analysis. (A, B) GC analyses of the ß-elemene standard (A) and the culture extract of the yeast strain SGAS5. (C) GC-MS spectra of the chromatographic peak corresponding to ß-elemene in (B). Figure S2. List of pairwise protein sequence identity (%) comparison between ten GAS candidates applied for screening in this study. Figure S3. Extracellular farnesol production of yeast strains SGAS5, SMVA1, SMVA2, and SMVA3. Figure S4. Sequence alignment of AvGAS with NsGAS, NcGAS, and bLinS from Streptomyces clavuligerus (5NX6). Two conserved regions within the active site, the aspartate-rich (DDXX(X)(D,E)) motif and the NSE (NDXXSXX(R,K)(E,D)) triad, required for binding catalytically essential Mg2+ ions, were indicated with boxes. Figure S5. Extracellular germacrene A production of yeast cells expressing the indicated GASs, respectively. GASs were expressed in S. cerevisiae CEN.PK2-1D wherein tHMGR1 was overexpressed and ERG9 was downregulated via promoter replacement, as described in the main text. Figure S6. Extracellular farnesol production of yeast strain SHEF and SHEF strains expressing LsGAS, AvGAS, and AvGAS-F23W, respectively. Figure S7. Extracellular and intracellular germacrene A accumulation in the yeast strain SHEF after cultivation for 72 h. Figure S8. Location of Phe23 in the modelled structure of AvGAS. The substrate FPP is represented as cyan sticks and Phe23 is shown as purple sticks. Table S1. Growth analyses of yeast cells expressing Phe23 mutants of AvGAS after cultivation for 72 h.
Magnetic condensation and confinement in lattice gauge theory
Creators: name: Cea, P.
name: Cosmai, L.
Publisher: name: arXiv
Year: 2000
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We investigate Abelian monopoles and Abelian vortices condensation in finite temperature SU(2) and SU(3) pure lattice gauge theories.
description: Lattice 2000 (Topology and Vacuum), 4 pages, 3 figures
title: ADCO, Cartulaire de l'abbaye de Cîteaux dit Cartulare Antiquum t.2 (2e moitié XIIIe siècle), Cart. 167 (11 H 67), f. 0026v
Creators: name: de la Côte d'Or, Archives départementales
name: CG21/F.PETOT/2010
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: cartulaire
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: Cartulaire de l'abbaye de Cîteaux dit Cartulare Antiquum t.2 (2e moitié XIIIe siècle), Archives départementales de la Côte-d'Or, Cart. 167 (11 H 67), f. 0026v, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire de l'abbaye de Cîteaux dit Cartulare Antiquum t.2 (2e moitié XIIIe siècle), Archives départementales de la Côte-d'Or, Cart. 167 (11 H 67), f. 0026v, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
On Orientifold Constructions of Type IIA Dual Pairs
Creators: name: Biswas, Anindya K.
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: In this paper we analyze the earlier constructions of the type IIA dual pairs through orientifolding. By an appropriate choice of $Γ$-matrix basis for the spinor representations of the $U$-duality group, we give an explicit relationship between the orientifold models and their dual pairs.
description: 11pages, Latex
Probability density function characterization of multipartite entanglement
Creators: name: Facchi, P.
name: Florio, G.
name: Pascazio, S.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We propose a method to characterize and quantify multipartite entanglement for pure states. The method hinges upon the study of the probability density function of bipartite entanglement and is tested on an ensemble of qubits in a variety of situations. This characterization is also compared to several measures of multipartite entanglement.
description: 7 pages, 2 figures; published version; title changed; further explanations and comparison with several measures of multipartite entanglement added
Challenges in making standardisation work in healthcare: lessons from a qualitative interview study of a line-labelling policy in a UK region.
Creators: name: Kriznik, Natasha Marie
name: Lamé, Guillaume
name: Dixon-Woods, Mary
Publisher: name: Apollo - University of Cambridge Repository
Year: 2019
Subjects: Implementation
Usability
Standardisation
Systems Thinking

description: OBJECTIVE:To identify and learn from efforts to design and implement a standardised policy for labelling of invasive tubing and lines across a regional health system. DESIGN:Single case study involving qualitative interviews and documentary analysis. SETTING:A devolved health system in the UK National Health Service (NHS). PARTICIPANTS:NHS staff (n=10) and policy-makers (n=8) who were involved in the design and/or implementation of the standardised policy. RESULTS:Though standardising labelling of invasive tubing and lines was initially seen as a common-sense technical change, challenges during the process of developing and implementing the policy were multiple and sociotechnical in nature. Major challenges related to defining the problem and the solution, limited sustained engagement with stakeholders and users, prototyping/piloting of the solution, and planning for implementation. Some frontline staff remained unconvinced of the need for or value of the policy, since they either did not believe that there was a problem or did not agree that standardised labelling was the right solution. Mundane practical issues such authorisation and resourcing, supply chains for labels, the need to restructure work practices to accommodate the new standard, and the physical features of the labels in specific clinical settings all had important impacts. CONCLUSIONS:Newly standardised tools and practices have to fit within a system of pre-existing norms, practices and procedures. We identified a number of practical, social and cultural challenges when designing and implementing a standardised policy in a regional healthcare system. Taking account of both sociocultural and technical aspects of standardisation, combined with systems thinking, could lead to more effective implementation and increase acceptability and usability of new standards.
Exact Chiral Symmetry for Domain Wall Fermions with Finite L_s
Creators: name: Edwards, Robert G.
name: Heller, Urs M.
Publisher: name: arXiv
Year: 2000
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We show how the standard domain wall action can be simply modified to allow arbitrarily exact chiral symmetry at finite fifth dimensional extent $L_s$. We note that the method can be used for both quenched and dynamical calculations. We test the method using smooth and thermalized gauge field configurations. We also make comparisons of the performance (cost) of the domain wall operator for spectroscopy compared to other methods such as the overlap-Dirac operator and find both methods are comparable in cost.
description: Lattice 2000(Chiral Fermions), LaTeX, 4 pages, 4 postscript figures. Reference added
Additional file 3: of 70ProPred: a predictor for discovering sigma70 promoters based on combining multiple features
Creators: name: Wenying He
name: Cangzhi Jia
name: Yucong Duan
name: Zou, Quan
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics

description: Table S2. Comparison prediction results of different k neighbors. (DOC 47 kb)
Quasi-periodic Oscillations in the X-ray Light Curves from Relativistic Tori
Creators: name: Schnittman, Jeremy D.
name: Rezzolla, Luciano
Publisher: name: arXiv
Year: 2005
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We use a relativistic ray-tracing code to analyze the X-ray emission from a pressure-supported oscillating relativistic torus around a black hole. We show that a strong correlation exists between the {\it intrinsic} frequencies of the torus normal modes and the {\it extrinsic} frequencies seen in the observed light curve power spectrum. This correlation demonstrates the feasibility of the oscillating-torus model to explain the multiple peaks seen in black hole high-frequency quasi-periodic oscillations. Using an optically thin, monochromatic emission model, we also determine how a relativistically broadened emission line and the amplitude of the X-ray modulations are dependent on the observer's inclination angle and on the torus oscillation amplitudes. Observations of these features can provide important information about the torus as well as the black hole.
description: 4 pages, 3 figures, submitted to ApJL
Artifacts in magnetic spirals retrieved by transport of intensity equation (TIE)
Creators: name: Cui, J.
name: Yao, Y.
name: Shen, X.
name: Wang, Y. G.
name: Yu, R. C.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The artifacts in the magnetic structures reconstructed from Lorentz transmission electron microscopy (LTEM) images with TIE method have been analyzed in detail. The processing for the simulated images of Bloch and Neel spirals indicated that the improper parameters in TIE may overestimate the high frequency information and induce some false features in the retrieved images. The specimen tilting will further complicate the analysis of the images because the LTEM image contrast is not the result of the magnetization distribution within the specimen but the integral projection pattern of the magnetic induction filling the entire space including the specimen.
Additional file 1: of Combined Protocol for Acute Malnutrition Study (ComPAS) in rural South Sudan and urban Kenya: study protocol for a randomized controlled trial
Creators: name: Bailey, Jeanette
name: Lelijveld, Natasha
name: Marron, Bethany
name: Onyoo, Pamela
name: Ho, Lara
name: Manary, Mark
name: AndrĂŠ Briend
name: Opondo, Charles
name: Kerac, Marko
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Sociology
subject: FOS: Sociology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: FOS: Biological sciences
subject: 60506 Virology
subject: Computational Biology

description: Procedures for taking anthropometric measurements. (DOCX 14Â kb)