cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Vector Boson Fusion in the Inert Doublet Model
Creators: name: Dutta, Bhaskar
name: Palacio, Guillermo
name: Ruiz-Alvarez, Jose D.
name: Restrepo, Diego
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: In this paper we probe inert Higgs doublet model at the LHC using Vector Boson Fusion (VBF) search strategy. We optimize the selection cuts and investigate the parameter space of the model and we show that the VBF search has a better reach when compared with the monojet searches. We also investigate the Drell-Yan type cuts and show that they can be important for smaller charged Higgs masses. We determine the $3σ$ reach for the parameter space using these optimized cuts for a luminosity of 3000 fb$^{-1}$.
description: 13 pages, 9 figures. Used code at: https://github.com/restrepo/VBF_IDM. References added, accepted version in PRD
pyhf: a pure Python implementation of HistFactory with tensors and autograd
Creators: name: Heinrich, Lukas Alexander
name: Feickert, Matthew
name: Giordon Holtsberg Stark
name: Cranmer, Kyle Stuart
Publisher: name: Zenodo
Year: 2019

description: The `HistFactory` p.d.f. template [[CERN-OPEN-2012-016](https://cds.cern.ch/record/1456844)] is per-se independent of its implementation in `ROOT` and it is useful to be able to run statistical analysis outside of the `ROOT`, `RooFit`, `RooStats` framework. `pyhf` is a pure-python implementation of that statistical model for multi-bin histogram-based analysis and its interval estimation is based on the asymptotic formulas of "Asymptotic formulae for likelihood-based tests of new physics" [[arxiv:1007.1727](https://arxiv.org/abs/1007.1727)]. `pyhf` supports modern computational graph libraries such as TensorFlow and PyTorch in order to make use of features such as autodifferentiation and GPU acceleration.
Additional file 1 of Antimicrobial resistance surveillance and trends in armed conflict, fragile, and non-conflict countries of the Eastern Mediterranean Region
Creators: name: Moghnieh, Rima
name: Bizri, Nazih
name: Abdallah, Dania
name: Sayegh, Mohamed H.
Publisher: name: figshare
Year: 2025
Subjects: subject: Medicine
subject: Neuroscience
subject: Biotechnology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Mental Health
subject: Virology

description: Supplementary materials 1
Finite Temperature Lattice QCD with Clover Fermions
Creators: name: Bernard, Claude
name: Blum, Tom
name: DeGrand, Thomas A.
name: DeTar, Carleton
name: Gottlieb, Steven
name: Heller, Urs M.
name: Hetrick, Jim
name: McNeile, Craig
name: Rummukainen, Kari
name: Sugar, Bob
name: Toussaint, Doug
name: Wingate, Matt
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We report on our simulation of finite temperature lattice QCD with two flavors of ${\cal O}(a)$ Symanzik-improved fermions and ${\cal O}(a^2)$ Symanzik-improved glue. Our thermodynamic simulations were performed on an $8^3 \times 4$ lattice, and we have performed complementary zero temperature simulations on an $8^3 \times 16$ lattice. We compare our results to those from simulations with two flavors of Wilson fermions and discuss the improvement resulting from use of the improved action.
description: 3 pages, 4 figures, Talk presented at Lattice 96
Surfactant-laden liquid thread breakup driven by thermal fluctuations
Creators: name: Carnevale, L. H.
name: Deuar, P.
name: Che, Z.
name: Theodorakis, P. E.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Fluid Dynamics (physics.flu-dyn)
subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: The breakup of liquid threads into droplets is crucial in various applications, such as nanoprinting, nanomanufacturing, and inkjet printing, where a detailed understanding of the thinning neck dynamics allows for a precise droplet control. Here, the role of surfactant in the breakup process is studied by many-body dissipative particle dynamics, in particular, the various regime transitions and thread profiles, shedding light on molecular-level intricacies of this process hitherto inaccessible to continuum theory and experiments. Moreover, the role of surfactant in the most unstable perturbation, the formed droplet size, and surfactant distributions have been unraveled. As surfactant concentration rises, both the wavelength and time to breakup steadily increase due to the lowering of surface tension below the critical micelle concentration (CMC) and viscous effects introduced by micelles above the CMC. These changes prior to the breakup lead to larger droplets being formed in cases with higher surfactant concentration. We also compared the thinning dynamics to existing theoretical predictions, revealing that the surfactant-laden breakup starts at the inertial regime and transitions into the thermal fluctuation regime when the concentration is increased. Thus, we illuminate the hitherto poorly investigated and intricate breakup process of surfactant-laden liquid threads driven by thermal fluctuations, contributing to a deeper understanding of this process at molecular scales.
description: 10 figures, 24 pages
Steered molecular dynamics for studying ligand unbinding of ecdysone receptor
Creators: name: Hu, Xueping
name: Hu, Song
name: Wang, Jiazhe
name: Dong, Yawen
name: Zhang, Li
name: Dong, Yanhong
Publisher: name: Taylor & Francis
Year: 2017
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Developmental Biology

description: Ecdysone receptor (EcR) is an important target for pesticide design. Ligand binding regulates EcR transcriptional activity similar to other nuclear receptors; however, the pathways by which ligands enter and leave the EcR remain poorly understood. Here, we performed computational studies to identify unbinding pathways of an ecdysone agonist [the selective ecdysone agonist, BYI06830] from the EcR ligand binding domain (EcR LBD). BYI06830 can dissociate from EcR LBD via four different pathways with little effect on receptor structure. By comparing the potential of mean force (PMF) of four pathways, path 2 was considered to be the most likely exit path for BYI06830, which was located in the cleft formed by the H3-H4 loop, H6-H7 loop, and the H11 C-terminus. Furthermore, structural features along path 2 were analyzed and the structural snapshots of the metastable and transition states were isolated to illustrate the unbinding mechanism of ecdysone agonist from EcR LBD.
MOESM1 of l-Lactic acid production from glucose and xylose with engineered strains of Saccharomyces cerevisiae: aeration and carbon source influence yields and productivities
Creators: name: Novy, Vera
name: Brunner, Bernd
name: Nidetzky, Bernd
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Physiology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified

description: Additional file 1: Table S1. Physiological parameters of strain IBB14LA1 in glucose and xylose conversions under anaerobic and aerobic conditions.
Fluxbrane and S-brane solutions with polynomials related to rank-2 Lie algebras
Creators: name: Goncharenko, I. S.
name: Ivashchuk, V. D.
name: Melnikov, V. N.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Mathematical Physics (math-ph)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Theory (hep-th)
subject: Differential Geometry (math.DG)
subject: FOS: Physical sciences
subject: FOS: Mathematics
subject: 53Z05

description: Composite fluxbrane and S-brane solutions for a wide class of intersection rules are considered. These solutions are defined on a product manifold R_{*} x M_1 x ... x M_n which contains n Ricci-flat spaces M_1, ..., M_n with 1-dimensional factor spaces R_{*} and M_1. They are determined up to a set of functions obeying non-linear differential equations equivalent to Toda-type equations with certain boundary conditions imposed. Exact solutions corresponding to configurations with two branes and intersections related to simple Lie algebras C_2 and G_2 are obtained. In these cases, the functions H_s(z), s =1,2, are polynomials of degrees (3, 4) and (6, 10), respectively, in agreement with a conjecture put forward previously in Ref., \cite{Iflux}. The S-brane solutions under consideration, for special choices of the parameters, may describe an accelerating expansion of our 3-dimensional space and a small enough variation of the effective gravitational constant.
description: 5 pages, Latex, journal version
Effects of turbulence, resistivity and boundary conditions on helicoidal flow collimation: consequences for the Von-Kármán-Sodium dynamo experiment
Creators: name: Varela, J.
name: Brun, S.
name: Dubrulle, B.
name: Nore, C.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Plasma Physics (physics.plasm-ph)
subject: FOS: Physical sciences

description: We present hydrodynamic and magneto-hydrodynamic simulations of a liquid sodium flow using the compressible MHD code PLUTO to investigate the magnetic field regeneration in the Von-Karman-Sodium dynamo experiment. The aim of the study is to analyze the influence of the fluid resistivity and turbulence level on the collimation by helicoidal motions of a remnant magnetic field. We use a simplified cartesian geometry to represent the flow dynamics in the vicinity of one cavity of a multi-blades impeller inspired by those used in the Von-Karman-Sodium (VKS) experiment. We perform numerical simulations with kinetic Reynolds numbers up to 1000 for magnetic Prandtl numbers between 30 and 0.1. Our study shows that perfect ferromagnetic walls favour enhanced collimation of flow and magnetic fields even if the turbulence degree of the model increases. The location of the helicoidal coherent vortex in between the blades changes with the impinging velocity. It becomes closer to the upstream blade and impeller base if the flow incident angle is analogous to the TM73 impeller configuration rotating in the unscooping direction. This result is also obtained at higher kinetic Reynolds numbers when the helicoidal vortex undergoes a precessing motion, leading to a reinforced effect in the vortex evolution and in the magnetic field collimation when using again perfect ferromagnetic boundary conditions. We estimate the efficiency of a hypothetical dynamo loop occurring in the vicinity of the impeller and discuss the relevance of our findings in the context of mean field dynamo theory.
A geometric characterisation of real C*-algebras
Creators: name: Chu, Cho-Ho
Publisher: name: arXiv
Year: 2024
Subjects: subject: Operator Algebras (math.OA)
subject: Functional Analysis (math.FA)
subject: FOS: Mathematics
subject: 46L05

description: We characterise the positive cone of a real C*-algebra geometrically. Given an open cone $Ω$ in a real Banach space $V$, with closure $\overline Ω$, we show that $Ω$ is the interior of the positive cone of a unital real C*-algebra if and only if it is a Finsler symmetric cone with an orientable extension, which is equivalent to the condition that $V$ is, in an equivalent norm, the hermitian part of a unital real C*-algebra with positive cone $\overlineΩ$.
The culmination of an inverse cascade: mean flow and fluctuations
Creators: name: Frishman, Anna
Publisher: name: arXiv
Year: 2017
Subjects: subject: Fluid Dynamics (physics.flu-dyn)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Chaotic Dynamics (nlin.CD)
subject: FOS: Physical sciences

description: Two dimensional turbulence has a remarkable tendency to self-organize into large, coherent structures, forming a mean flow. The purpose of this paper is to elucidate how these structures are sustained, and what determines them and the fluctuations around them. A recent theory for the mean flow will be reviewed. The theory assumes turbulence is excited by a forcing supported on small scales, and uses a linear shear model to relate the turbulent momentum flux to the mean shear rate. Extending the theory, it will be shown here that the relation between the momentum flux and mean shear is valid, and the momentum flux is non-zero, for both an isotropic and an anisotropic forcing, independent of the dissipation mechanism at small scales. This conclusion requires taking into account that the linear shear model is an approximation to the real system. The proportionality between the momentum flux and the inverse of the shear can then be inferred most simply on dimensional grounds. Moreover, for a homogeneous pumping, the proportionality constant can be determined by symmetry considerations, recovering the result of the original theory. The regime of applicability of the theory, its compatibility with observations from simulations, a formula for the momentum flux for an inhomogeneous pumping, and results for the statistics of fluctuations, will also be discussed.
Towards a NoOps Model for WLCG
Creators: name: Gardner, Robert William
name: Bryant, Lincoln
name: Weaver, Christopher
name: Vukotic, Ilija
Publisher: name: Zenodo
Year: 2019

description: One of the most costly factors in providing a global computing infrastructure such as the WLCG is the human effort in deployment, integration, and operation of the distributed services supporting collaborative computing, data sharing and delivery, and analysis of extreme scale datasets. Furthermore, the time required to roll out global software updates, introduce new service components, or prototype novel systems requiring coordinated deployments across multiple facilities is often increased by communication latencies, staff availability, and in many cases expertise required for operations of bespoke services. While the WLCG computing grid (and distributed systems implemented throughout HEP) is a global service platform, it lacks the capability and flexibility of a modern platform-as-a-service including continuous integration/continuous delivery (CI/CD) methods, development-operations capabilities (DevOps, where developers assume a more direct role in the actual production infrastructure), and automation. Most importantly, tooling which reduces required training, bespoke service expertise, and the operational effort throughout the infrastructure, most notably at the resource endpoints ("sites"), is entirely absent in the current model. In this paper, we explore ideas and questions around potential "NoOps" models in this context: what is realistic given organizational policies and constraints? How should operational responsibility be organized across teams and facilities? What are the technical gaps? What are the social and cybersecurity challenges? Conversely what advantages does a NoOps model deliver for innovation and for accelerating the pace of delivery of new services needed for the HL-LHC era? We will describe initial work along these lines in the context of providing a data delivery network supporting IRIS-HEP DOMA R&D.
The Formation of Globules in Planetary Nebulae
Creators: name: Huggins, P. J.
name: Frank, A.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We discuss the formation of globules in planetary nebulae, typified by those observed in the Helix Nebula. We show that the properties of the globules, their number, mass, separation, and overall geometry strongly support a scenario in which globules are formed by the fragmentation of a swept-up shell as opposed to models in which the knots form in the AGB wind. We show that the RT or other instabilities which lead to the break-up of shells formed in the nebulae by fast winds or ionization fronts can produce arrays of globules with the overall geometry and within the mass range observed. We also show that the presence of a magnetic field in the circumstellar gas may play an important role in controlling the fragmentation process. Using field strengths measured in the precursor AGB envelopes, we find that close to the central star where the fields are relatively strong, the wavelengths of unstable MRT modes are larger than the shell dimensions, and the fragmentation of the shell is suppressed. The wavelength of the most unstable MRT mode decreases with increasing distance from the star, and when it becomes comparable to the shell thickness, it can lead to the sudden, rapid break-up of an accelerating shell. For typical nebula parameters, the model results in numerous fragments with a mass scale and a separation scale similar to those observed. Our results provide a link between global models of PN shaping in which shells form via winds and ionization fronts, and the formation of small scale structures in the nebulae.
description: 4 pages, 2 figures, to appear in IAU Symp. 234, Planetary Nebulae in Our Galaxy and Beyond, eds. M. J. Barlow, R. H. Mendez
Additional file 1 of Exploring different modelling approaches to forecast the community acute respiratory infections burden in children: an Italian epidemiological time series study
Creators: name: Boracchini, Riccardo
name: Canova, Benedetta
name: Ferrara, Pietro
name: Barbieri, Elisa
name: Lovaglio, Pietro Giorgio
name: Scamarcia, Antonio
name: Corrao, Giovanni
name: Donà, Daniele
name: Giaquinto, Carlo
name: Di Chiara, Costanza
name: Cantarutti, Anna
Publisher: name: figshare
Year: 2025
Subjects: Medicine
Biological Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified
Cancer
Science Policy
Computational Biology

description: Supplementary Material 1.
MOESM1 of Localization and phosphorylation of Plasmodium falciparum nicotinamide/nicotinate mononucleotide adenylyltransferase (PfNMNAT) in intraerythrocytic stages
Creators: name: Nieto, Carlos
name: Sánchez, Lina
name: Sánchez, Diana
name: Díaz, Gonzalo
name: Ramírez, María
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Cancer

description: Additional file 1. Evaluation of anti-His-PfNMNAT IgY (Serum) antibodies on the recombinant protein.
A maximally superintegrable system on an n-dimensional space of nonconstant curvature
Creators: name: Ballesteros, Angel
name: Enciso, Alberto
name: Herranz, Francisco J.
name: Ragnisco, Orlando
Publisher: name: arXiv
Year: 2006
Subjects: subject: Mathematical Physics (math-ph)
subject: Exactly Solvable and Integrable Systems (nlin.SI)
subject: FOS: Physical sciences
subject: 37J35; 70H06; 16W30

description: A novel Hamiltonian system in n dimensions which admits the maximal number 2n-1 of functionally independent, quadratic first integrals is presented. This system turns out to be the first example of a maximally superintegrable Hamiltonian on an n-dimensional Riemannian space of nonconstant curvature, and it can be interpreted as the intrinsic Smorodinsky-Winternitz system on such a space. Moreover, we provide three different complete sets of integrals in involution and solve the equations of motion in closed form.
description: 11 pages
title: ADCO, Cartulaire général de Cîteaux, dit de Jean de Cirey, (XVe siècle), tome IX, Cart. 193 (11 H 78), f. 0060r
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: cartulaire
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: Cartulaire général de Cîteaux, dit de Jean de Cirey, (XVe siècle), tome IX, Archives départementales de la Côte-d'Or, Cart. 193 (11 H 78), f. 0060r, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire général de Cîteaux, dit de Jean de Cirey, (XVe siècle), tome IX, Archives départementales de la Côte-d'Or, Cart. 193 (11 H 78), f. 0060r, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
Analysis of Alfven Eigenmodes destabilization by energetic particles in TJ-II using a Landau-closure model
Creators: name: Varela, J.
name: Spong, D.
name: Garcia, L.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Plasma Physics (physics.plasm-ph)
subject: FOS: Physical sciences

description: Alfven Eigenmodes (AE) can be destabilized by energetic particles in neutral beam injection (NBI) heated plasmas through inverse Landau damping and couplings with gap modes in the shear Alfven continua. We describe the linear evolution of the poloidal flux and the toroidal component of the vorticity in a full 3D system using the reduced MHD equations, density and parallel velocity moments for the energetic particles as well as the geodesic acoustic wave dynamics. A closure relation adds the Landau damping and resonant destabilization effects in the model. We apply the model to study the Alfven modes stability in TJ-II, performing a parametric analysis in a range of realistic values of energetic particle $β$ (beta_f), ratios of thermal/Alfven velocities (Vth/VA0), energetic particle density profiles and toroidal modes (n) including toroidal and helical couplings. The study predicts a large helical coupling between different toroidal modes and the destabilization of helical Alfven Eigenmodes (HAE) with frequencies similar to the AE activity measured in TJ-II, between 50 - 400 kHz. The analysis has also revealed the destabilization of GAE (Global Alfven Eigenmodes), TAE (Toroidal Alfven Eigenmodes) and EPM (Energetic Particle Modes). For the modes considered here, optimized TJ-II operations require a iota profile in the range of [0.845, 0.979] to stabilize AEs in the inner and middle plasma. AEs in the plasma periphery cannot be fully stabilized, although for a configuration with iota = [0.945, 1.079], only n=7,11,15 AE are unstable with a growth rate 4 times smaller compared to the standard iota = [1.54,1.68] case and a frequency of 100 kHz. We reproduce the frequency sweeping evolution of the AE frequency observed in TJ-II as the iota profile is varied. The AE frequency sweeping is caused by consecutive changes of the instability dominant modes between different helical families.
description: Nuclear fusion 2017
Hall-Littlewood polynomials and a Hecke action on ordered set partitions
Creators: name: Huang, Jia
name: Rhoades, Brendon
name: Scrimshaw, Travis
Publisher: name: arXiv
Year: 2017
Subjects: subject: Combinatorics (math.CO)
subject: FOS: Mathematics

description: We construct an action of the Hecke algebra $H_n(q)$ on a quotient of the polynomial ring $F[x_1, \dots, x_n]$, where $F = \mathbb{Q}(q)$. The dimension of our quotient ring is the number of $k$-block ordered set partitions of $\{1, 2, \dots, n \}$. This gives a quantum analog of a construction of Haglund-Rhoades-Shimozono and interpolates between their result at $q = 1$ and work of Huang-Rhoades at $q = 0$.
description: 11 pages
Additional file 2 of Alteration in the sensitivity to crizotinib by Na+/H+ exchanger regulatory factor 1 is dependent to its subcellular localization in ALK-positive lung cancers
Creators: name: Yang, Fenglian
name: Hu, Mu
name: Chang, Siyuan
name: Huang, Jing
name: Si, Yang
name: Wang, Jinghui
name: Cheng, Shan
name: Jiang, Wen G.
Publisher: name: figshare
Year: 2020
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Pharmacology
subject: Biotechnology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Additional file 2.
title: Trauma informed behaviour support: a practical guide to developing resilient learners
Creators: name: Ayre, Kay
name: Krishnamoorthy, Govind
Publisher: name: University of Southern Queensland
Year: 2020
Subjects: classificationCode: 160201
subject: Equity and access to education
classificationCode: 160101
subject: Early childhood education
classificationCode: 160103
subject: Primary education

description: Trauma Informed Behaviour Support provides teachers and education leaders with a differentiated and inclusive behaviour management approach where children and staff thrive. Drawing on contemproary research on developmental trauma and neuroscience, the book offers educators a practical guide to supporting the development of academic and social-emotional skills in the school context.
Offline Software Management of the AMS experiment
Creators: name: Egorov, Alexander
name: Eline, Alexandre
name: Baosong Shan
name: Choutko, Vitaly
Publisher: name: Zenodo
Year: 2019

description: The Alpha Magnetic Spectrometer (AMS) is a particle physics experiment installed and operating on board of the International Space Station (ISS) from May 2011 and expected to last through 2024 and beyond. The AMS offline software is used for data reconstruction, Monte-Carlo simulation and physics analysis. This paper presents how we manage the offline software, including the version control, the building, the documentation, the functional and performance testing, etc.
Evasion of No-Hair Theorems and Novel Black-Hole Solutions in Gauss-Bonnet Theories
Creators: name: Antoniou, G.
name: Bakopoulos, A.
name: Kanti, P.
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We consider a general Einstein-scalar-GB theory with a coupling function f(ϕ). We demonstrate that black-hole solutions appear as a generic feature of this theory since a regular horizon and an asymptotically-flat solution may be easily constructed under mild assumptions for f(ϕ). We show that the existing no-hair theorems are easily evaded, and a large number of regular, black-hole solutions with scalar hair are then presented for a plethora of coupling functions f(ϕ).
description: PdfLatex, 6 pages, a variety of numerical solutions and 2 figures were added, version to appear in Physical Review Letters
title: Estimating invasive species impact
title: interaction strengths, abundance and the role of productivity in a freshwater invasion
titleType: Subtitle
Creators: name: Riley, Leslie Anne
Publisher: name: Washington State University
Year: 2008
Subjects: Biological invasions

description: Estimating the strength of interactions between species is central to diverse questions in ecology, yet the theoretical basis for interaction strengths has only been well-developed for trophic interactions in dynamic food web models. In chapter 1, we derived dynamic interaction strengths for non-trophic interactions and specifically applied this to interactions between an invasive and native species. We then demonstrate how dynamic interaction strengths can be used in current estimates of invasive impact and expand impact measures to also include reciprocal effects of resident species on the invader. In chapter 2, we test how grazing impacts of the invasive New Zealand mud snail (Potamopyrgus antipodarum) varies with resource availability by measuring both Potamopyrgus biomass and per unit grazing effects (i.e. dynamic interaction strengths) across streams that vary in primary production. We found that Potamopyrgus reduced algae, regardless of resource level. We also found that grazing interaction strengths (i.e. per unit effects) were strongest in the most productive streams and snail biomass was highest in the same streams, resulting in Potamopyrgus having the largest impacts on algae in the most productive streams. In chapter 3, we tested how resource availability affects competition between the invasive Potamopyrgus and a native snail (Pyrgulopsis robusta). We measured growth rates of Potamopyrgus and Pyrgulopsis and interspecific competition between them at two experimentally-altered resource levels. We found that Potamopyrgus always grew faster than Pyrgulopsis. In the presence of interspecific competition, Potamopyrgus growth rates were not affected by resource levels or the biomass of Pyrgulopsis competitors. Alternatively, Pyrgulopsis grew slower at low resource levels and especially when the biomass of Potamopyrgus competitors was high. Competitive effects of Potamopyrgus on Pyrgulopsis were reduced at high resource levels due to faster Pyrgulopsis growth rates; Pyrgulopsis, though, does not strongly compete with Potamopyrgus under any resource scenario. Overall, this study extends the use of dynamic interaction strengths to include non-trophic interactions and shows how the full range of community interactions can be included in measures of invasive species impact, facilitating comparisons of impact across species, productivity gradients and different types of community interactions.
Empirical comparison of graph classification and regression algorithms
Creators: name: Ketkar, Nikhil S.
Publisher: name: Washington State University
Year: 2009
Subjects: Prediction theory -- Mathematical models

description: Several domains are inherently structural; relevant data cannot be represented as a single table without significant loss of information. The development of predictive models in such domains becomes a challenge as traditional machine learning algorithms which deal with attribute-valued data cannot be used. One approach to develop predictive models in such domains is to represent the relevant data as labeled graphs and treat subgraphs of these graphs as features on which to base the predictive model. The general area of this research is the development of predictive models for such domains. Specifically, we target domains which are readily modeled as sets of separate graphs (rather than a single graph) and on the tasks of binary classification and regression on such graphs. An example would be learning a binary classification model that distinguishes between aliphatic and aromatic compounds or a regression model for predicting the melting points of chemical compounds. The contributions of this work include a comprehensive comparison of current approaches to graph classification and regression to identify their strengths and weaknesses, the development of novel pruning mechanisms in the search for subgraph features for the graph regression problem, the development of a new algorithm for graph regression called gRegress and the application of current approaches in graph classification and regression to various problems in computational chemistry. Our empirical results indicate that our pruning mechanisms can bring about a significant improvement in the search for relevant subgraph features based on their correlation with each other and the target, sometimes by an order of magnitude. Our empirical results also indicate that gRegress addresses a key weakness in the current work on graph regression, namely, the need for a combination of linear models.
Xrootd Third Party Copy for the WLCG and HL-LHC
Creators: name: Hanushevsky, Andrew
name: Ganis, Gerardo
name: Yang, Wei
name: Rossi, Albert
name: Manzi, Andrea
name: Bockelman, Brian Paul
name: Litvintsev, Dmitry
name: Sindrilaru, Elvin Alin
name: Furano, Fabrizio
name: Patargias, George
name: Ito, Hironori
name: Severini, Horst
name: Johnson, Ian
name: Ellis, Katy
name: Simon, Michal Kamil
name: Freyermuth, Oliver
name: Keeble, Oliver
name: Millar, Paul
name: Mkrtchyan, Tigran
name: Adye, Tim
Publisher: name: Zenodo
Year: 2019

description: A Third Party Copy (TPC) has existed in the pure XRootD storage environment for many years. However using XRootD TPC in the WLCG environment presents additional challenges due to the diversity of the storage systems involved such as EOS, dCache, DPM and ECHO, requiring that we carefully navigate the unique constraints imposed by these storage systems and their site-specific environments through customized configuration and software development. To support multi-tenant setups seen at many WLCG sites, X509 based authentication and authorization in XRootD was significantly improved to meet both security and functionality requirements. This paper presents architecture of the pull based TPC with optional X509 credential delegation and how it is implemented in native XRootD and dCache. The paper discusses technical requirements, challenges, design choices and implementation details in the WLCG storage systems, as well as in FTS/gfal2. It also outlines XRootD's plan to support newer TPC and security models such as token based authorization.
Efficient Computations of Encodings for Quantum Error Correction
Creators: name: Cleve, Richard
name: Gottesman, Daniel
Publisher: name: arXiv
Year: 1996
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We show how, given any set of generators of the stabilizer of a quantum code, an efficient gate array that computes the codewords can be constructed. For an n-qubit code whose stabilizer has d generators, the resulting gate array consists of O(n d) operations, and converts k-qubit data (where k = n - d) into n-qubit codewords.
description: 16 pages, REVTeX, 3 figures within the text
Additional file 1 of Insights into the complex relationship between triglyceride glucose-waist height ratio index, mean arterial pressure, and cardiovascular disease: a nationwide prospective cohort study
Creators: name: Xu, Jie
name: Cai, Dihui
name: Jiao, Yuheng
name: Liao, Yingying
name: Shen, Yinyin
name: Shen, Yunli
name: Han, Wei
Publisher: name: figshare
Year: 2025
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Cancer

description: Supplementary Material 1
Stellar Recipes for Axion Hunters
Creators: name: Giannotti, Maurizio
name: Irastorza, Igor G.
name: Redondo, Javier
name: Ringwald, Andreas
name: Saikawa, Ken'ichi
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: There are a number of observational hints from astrophysics which point to the existence of stellar energy losses beyond the ones accounted for by neutrino emission. These excessive energy losses may be explained by the existence of a new sub-keV mass pseudoscalar Nambu--Goldstone boson with tiny couplings to photons, electrons, and nucleons. An attractive possibility is to identify this particle with the axion -- the hypothetical pseudo Nambu--Goldstone boson predicted by the Peccei--Quinn solution to the strong CP problem. We explore this possibility in terms of a DFSZ-type axion and of a KSVZ-type axion/majoron, respectively. Both models allow a good global fit to the data, prefering an axion mass around 10 meV. We show that future axion experiments -- the fifth force experiment ARIADNE and the helioscope IAXO -- can attack the preferred mass range from the lower and higher end, respectively. An axion in this mass range can also be the main constituent of dark matter.
description: 32 pages, 5 figures
Toward uniform random generation in 1-safe Petri nets
Creators: name: Abbes, Samy
Publisher: name: arXiv
Year: 2017
Subjects: subject: Formal Languages and Automata Theory (cs.FL)
subject: Discrete Mathematics (cs.DM)
subject: FOS: Computer and information sciences

description: We study the notion of uniform measure on the space of infinite executions of a 1-safe Petri net. Here, executions of 1-safe Petri nets are understood up to commutation of concurrent transitions, which introduces a challenge compared to usual transition systems. We obtain that the random generation of infinite executions reduces to the simulation of a finite state Markov chain. Algorithmic issues are discussed.
description: 10 pages, 2 figures. In GASCOM 2016 proceedings
The CMS approach to analysis preservation
Creators: name: Iglesias, Lara Lloret
Publisher: name: Zenodo
Year: 2019

description: The CERN analysis preservation portal (CAP) comprises a set of tools and services aiming to assist researchers in describing and preserving all the components of a physics analysis such as data, software and computing environment. Together with the associated documentation, all these assets are kept in one place so that the analysis can be fully or partially reused even several years after the publication of the original scientific results. An experiment-specific submission and retrieval interface has been developed for the CMS collaboration. It integrates with the CMS internal analysis registry (CADI) to capture all analyses with basic information, complemented with a detailed submission form for full information. The CMS data aggregation system (DAS) is interfaced to the deposit form to assist in filling in exact dataset names used in the analysis to ensure searchability. Efforts are ongoing to describe physics content for an intelligent retrieval, and to interface with container solutions for full reproducibility for selected test cases.
ac Hall Effect and Photon Drag of Superconducting Condensate
Creators: name: Mironov, S. V.
name: Mel'nikov, A. S.
name: Buzdin, A. I.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: We suggest a theoretical description of the photogalvanic phenomena arising in superconducting condensates in the field of electromagnetic wave. The ac Hall effect and photon drag are shown to originate from the second-order nonlinear response of superconducting carriers caused by the suppression of their concentration due to the combined influence of the electron - hole asymmetry and charge imbalance generated by the incident electromagnetic wave. Starting from the time-dependent Ginzburg-Landau theory with the complex relaxation constant we develop a phenomenological description of these phenomena and investigate the resulting behavior of the dc supercurrent and second harmonic induced by microwave radiation incident on a superconductor surface.
description: 7 pages, 2 figures
Monopole Condensation and Polyakov Loop in Finite-Temperature Pure QCD
Creators: name: Ejiri, Shinji
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We study the relation between the abelian monopole condensation and the deconfinement phase transition of the finite-temperature pure QCD. The expectation value of the monopole contribution to the Polyakov loop becomes zero when a long monopole loop is distributed uniformly in the configuration of the confinement phase. On the other hand, it becomes non-zero when the long monopole loop disappears in the deconfinement phase. We also discuss the relation between the monopole behaviors and the usual interpretation of the spontaneous breaking of Z(N) symmetry in finite-temperature SU(N) QCD. It is found that the boundary condition of the space direction is important to understand the Z(N) symmetry in terms of the monopoles.
description: 3 pages, latex, 8 figures, Talk presented at LATTICE96(topology)
Time evolution of intermittency in the passive slider problem
Creators: name: Singha, Tapas
name: Barma, Mustansir
Publisher: name: arXiv
Year: 2017
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: How does a steady state with strong intermittency develop in time from an initial state which is statistically random? For passive sliders driven by various fluctuating surfaces, we show that the approach involves an indefinitely growing length scale which governs scaling properties. A simple model of sticky sliders suggests scaling forms for the time-dependent flatness and hyperflatness, both measures of intermittency and these are confirmed numerically for passive sliders driven by a Kardar-Parisi-Zhang surface. Aging properties are studied via a two-time flatness. We predict and verify numerically that the time-dependent flatness is, remarkably, a non-monotonic function of time, with different scaling forms at short and long times. The scaling description remains valid when clustering is more diffuse as for passive sliders evolving through Edwards-Wilkinson driving or under antiadvection, although exponents and scaling functions differ substantially.
description: 5 pages 6 figures
Additional file 1 of Methods for assessing exercise fidelity in unsupervised home-based cardiovascular rehabilitation: a scoping review
Creators: name: Jarallah, Mohammad
name: Withers, Thomas M
name: Rosewilliam, Sheeba
name: Stathi, Afroditi
name: Greaves, Colin J
Publisher: name: figshare
Year: 2025
Subjects: subject: Space Science
subject: Medicine
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Supplementary Material 1
BNL Cloud Storage Service BNLBox
Creators: name: Ito, Hironori
name: Rind, Ofer
name: Tejas Rao
name: Chou, Tim
name: Zaytsev, Alexandr
name: Zhenping Liu
name: Yingzi Wu
name: Ognian Novakov
name: Guangwei Che
name: Hancock, Robert
name: Karasawa, Mizuki
Publisher: name: Zenodo
Year: 2019

description: Large scientific data centers have recently begun providing a number of different types of data storage, to satisfy the various needs of their users. Users with interactive accounts, for example, might want a posix interface for easy access to the data from their interactive machines. Grid computing sites, on the other hand, likely need to provide an X509 based storage protocol, like SRM and GridFTP, since the data management system is built on top of them. Meanwhile, an experiment producing large amounts of data typically demands a service that provides archival storage for the safe keeping of their unique data. To access these various types of data, users must use specific sets of commands tailored for the respective storage, making access to their data complex and difficult. BNLBox is an attempt to provide a unified and easy to use storage service for all BNL users, scientists and engineers, to store their important documents, code and data. It is a cloud storage system with an intuitive web interface for novice users. It provides an automated synchronization feature that enables users to upload data to their cloud storage without manual intervention, freeing them to focus on analysis rather than data management software. It provides a posix interface for local interactive users, which simplifies data access from batch jobs as well. At the same time, it also provides users with a straightforward mechanism for archiving large data sets for later processing. The storage space can be used for both code and data within the compute job environment. This presentation will cover the various aspects of the BNLBox storage service.
Additional file 1: of Detection of titanium particles in human liver and spleen and possible health implications
Creators: name: M. Heringa
name: R. Peters
name: R. Bleys
name: M. Van Der Lee
name: P. Tromp
name: P. Van Kesteren
name: J. Van Eijkeren
name: A. Undas
name: A. Oomen
name: H. Bouwmeester
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Supplementary Information for "Detection of titanium particles in human liver and spleen and possible helath implications". (DOCX 130 kb)
Tractable flux-driven temperature, density, and rotation profile evolution with the quasilinear gyrokinetic transport model QuaLiKiz
Creators: name: Citrin, J
name: Bourdelle, C
name: Casson, F J
name: Angioni, C
name: Bonanomi, N
name: Camenen, Y
name: Garbet, X
name: Garzotti, L
name: Görler, T
name: Gürcan, O
name: Koechl, F
name: Imbeaux, F
name: Linder, O
name: van de Plassche, K
name: Strand, P
name: Szepesi, G
name: Contributors, JET
Publisher: name: arXiv
Year: 2017
Subjects: subject: Plasma Physics (physics.plasm-ph)
subject: FOS: Physical sciences

description: Quasilinear turbulent transport models are a successful tool for prediction of core tokamak plasma profiles in many regimes. Their success hinges on the reproduction of local nonlinear gyrokinetic fluxes. We focus on significant progress in the quasilinear gyrokinetic transport model QuaLiKiz [C. Bourdelle et al. 2016 Plasma Phys. Control. Fusion 58 014036], which employs an approximated solution of the mode structures to significantly speed up computation time compared to full linear gyrokinetic solvers. Optimization of the dispersion relation solution algorithm within integrated modelling applications leads to flux calculations $\times10^{6-7}$ faster than local nonlinear simulations. This allows tractable simulation of flux-driven dynamic profile evolution including all transport channels: ion and electron heat, main particles, impurities, and momentum. Furthermore, QuaLiKiz now includes the impact of rotation and temperature anisotropy induced poloidal asymmetry on heavy impurity transport, important for W-transport applications. Application within the JETTO integrated modelling code results in 1s of JET plasma simulation within 10 hours using 10 CPUs. Simultaneous predictions of core density, temperature, and toroidal rotation profiles for both JET hybrid and baseline experiments are presented, covering both ion and electron turbulence scales. The simulations are successfully compared to measured profiles, with agreement mostly in the 5-25% range according to standard figures of merit.
Supplementary document for Multifunctional manipulation of terahertz waves using vanadium-dioxide-based metagratings - 5926590.pdf
Creators: name: Li, Jingwen
name: Li, Xiao
name: Liu, Jiaqing
name: Dong, Daxing
name: Liu, Youwen
name: Fu, Yangyang
Publisher: name: Optica Publishing Group
Year: 2022
Subjects: Uncategorized

description: Supplement 1