cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
D8.5: Report on Dynamic Data Framework and Management Services
Creators: name: Miranda, Alberto (BSC)
name: Weigel, Tobias (DKRZ)
name: Dima, Emanuel (EKUT)
name: Cacciari, Claudio (Cineca)
name: Cortes, Toni (BSC)
name: Queralt, Anna (BSC)
name: Fares, Massimo (INGV)
Publisher: name: https://b2share.eudat.eu
Year: 2017
Subjects: Data Life Cycle models, Dynamic Data, fingerprinting, deduplication

description: This document presents the work done by WP8 to produce a generic framework that allows the EUDAT CDI services to appropriately handle dynamic data. We propose a generic HTTP API to allow services to model the dynamic data lifecycle of research communities, present extensions to the Generic Execution Framework and discuss optimizations to data transfers and storage. We also discuss a proof-of-concept prototype for a dynamic data-enabled archival service based on the HTTP API and discuss the results obtained when using it to replicate a real use case.
Tschögele, Th. (2022): Die Erzählungen des Valerius Maximus.
Creators: name: Schmitz, Dietmar
Publisher: name: Forum Classicum
Year: 2024

description: Rezension zu: Tschögele, Th. (2022): Die Erzählungen des Valerius Maximus, Heidelberg, Universitätsverlag Winter. 502 S., (ISBN 978-3-8253-4919-6).
description: Forum Classicum, Nr. 4 (2023): Forum Classicum
Dickey, E. (2022): Latein lernen wie in der Antike. Latein-Lehrbücher aus der Antike.
Creators: name: Diez, Christopher
Publisher: name: Forum Classicum
Year: 2024

description: Rezension zu: Dickey, E. (2022): Latein lernen wie in der Antike. Latein-Lehrbücher aus der Antike. Aus dem Englischen übersetzt von Marion Schneider, Basel, Schwabe Verlag, 217 S., (ISBN 978-3-7965-4088-2).
description: Forum Classicum, Nr. 4 (2023): Forum Classicum
การวิเคราะห์อัตลักษณ์ท้องถิ่นในนิทานพื้นบ้านภาคใต้ของไทย
Creators: name: Peng, Zhao
Publisher: name: Huachiew Chalermprakiet University
Year: 2024
Subjects: อัตลักษณ์ท้องถิ่น
นิทานพื้นบ้าน
ภาคใต้ของไทย

description: Academic and Research Journal of Liberal Arts, 19, 1, 102-126
การศึกษาลักษณะทางกลสัทศาสตร์เสียงวรรณยุกต์ภาษาไทยของนักศึกษาชาวจีนสาขาวิชาภาษาไทย สถาบันผู่เจียงแห่งมหาวิทยาลัยอุตสาหกรรมนานกิงสาธารณรัฐประชาชนจีน
Creators: name: จุมพล ถาวรชอบ
Publisher: name: Huachiew Chalermprakiet University
Year: 2024
Subjects: วรรณยุกต์ภาษาไทย
กลสัทศาสตร์
นักศึกษาชาวจีน
ค่าความถี่มูลฐาน
ค่าเซมิโทน

description: Academic and Research Journal of Liberal Arts, 19, 1, 127-150
Effects of Low Dose Ionizing Radiation on DNA Damage and Repair Response in Proliferating Muscle Stem Cells
Creators: name: Odebunmi, Oluwaseun
Publisher: name: Université d'Ottawa / University of Ottawa
Year: 2020
Subjects: Ionizing Radiation
Myoblasts
Myogenicity
DNA damage
DNA repair
Double-strand Breaks
LDR priming
Homologous Recombination
Non-Homologous End Joining
Genomic Instability

description: There is substantial evidence on the carcinogenic properties of high doses of Ionizing Radiation (IR), however, whether such risks exist following exposure to low doses of radiation (LDR) (below 100mGy) remains controversial. The longevity of skeletal muscle stem cells in the body as a “satellite pool” increases their chances of accumulating genotoxic damage from stressors including IR. LDR has been reported to reduce these threats and salvage the health and survival of the skeletal muscle and that of the whole body. Previous studies suggested that muscle myoblasts exposed to LDR (10 and 100mGy) retain their myogenic capacity over a prolonged period of time better than non-irradiated control cells. Therefore, the aim of this study was to determine whether the observed LDR-triggered delay in ageing and functional decline was associated with enhanced genomic stability and error-free Homologous Recombination (HR) repair. To achieve this, mouse (C2C12) and human (HSKM) myoblasts were exposed to 10 or 100mGy of gamma-radiation and grown under optimal conditions for up to 12 (C2C12) or 2 weeks (HSKM). These cells were examined at time points 0, 4, 8 and 12 weeks for function, double-strand breaks (DSB) formation and repair and genomic instability. The results showed the suppression of genomic instability following exposure to LDR and a slight enhancement of HR repair in aged mouse myoblasts. On the other hand, LDR did not affect the generic DSB repair capacity. The unpronounced changes in the human model suggest that responses to LDR vary between species. The variability in the results still leaves a gap as to whether the improved function induced by LDR is associated with better HR activity and may imply alternative DNA repair mechanisms.
D4.8: Data and Computing Landscape Characteristics and Scientific Communities’ Environment & Requirements (final)
Creators: name: Broeder, Daan (CLARIN ERIC)
name: Du Toit, Leon (SIGMA)
name: Meyer, Jörg (KIT)
name: Bot, Jan (SURFsara)
Publisher: name: https://b2share.eudat.eu
Year: 2017
Subjects: Communities, Interviews, Analysis

description: D4.8 is the final deliverable in the D4.2, D4.5 series of reports. We present the findings of 21 face-to-face interviews and 16 desktop analyses in the form of a landscape study. Community specific analysis reports are summarised according to generic community features and compared within different scientific disciplines. We evaluate trends across these disciplines too. Specialised topics that arose through our series of interviews are explored. Findings with respect to EUDAT services and the EUDAT organisation are extracted and discussed. We conclude by reflecting on our findings, methodology, and offer advice to future e-Infrastructure projects wishing to undertake similar landscape study activities.
Influence of liquid water on thermal and acoustical properties of hemp concretes
Creators: name: Gourlay, E.
name: Pot, G.
name: Glé, P.
name: Gourdon, E.
name: Feeser, A.
Publisher: name: Academic Journal of Civil Engineering
Year: 2017

description: Hemp concrete is a multifunctional ecological material used in buildings which is obtained by mixing together a binder and hemp particles (the non-fibrous fraction of the hemp stem called “shiv” or “hurd”). Due to its high porosity (ranging from 60 to 90% in volume), it presents an “atypical” mechanical behavior and its hygrothermal and acoustical properties are particularly interesting. This paper focuses on the influence of liquid water on thermal and acoustical properties of hemp concretes. It is shown that wetting and drying cycles do not appear to degrade the properties of the material. Moreover, the water added to the surface of hemp concrete does not saturate the surface layer before penetrating more deeply into the material. Nevertheless, when a large amount of water is added, the acoustical behavior of hemp concrete becomes analogous to that of a two-layer material insofar as most of the acoustic energy is reflected by the first layer of hemp concrete, which is completely wet. Finally, the thermal conductivity of the material seems to stabilize from a certain volume of added water.
description: Academic Journal of Civil Engineering, Vol 35 No 2 (2017): Special Issue - ICBBM 2017
ภาพฉายแสงจากแบบสันนิษฐานของปราสาทเปือยน้อย จังหวัดขอนแก่นเพื่อส่งเสริมการท่องเที่ยวทางวัฒนธรรม
Creators: name: ฮาวา วงศ์พงษ์คำ
Publisher: name: Huachiew Chalermprakiet University
Year: 2024
Subjects: ภาพฉายแสง
แบบสันนิษฐาน
ปราสาทเปือยน้อย
การท่องเที่ยวทางวัฒนธรรม

description: Academic and Research Journal of Liberal Arts, 19, 1, 151-161
เพศสภาพของนักแปลกับกลวิธีการแปลหน่วยสร้างประโยคกรรมวาจกในนวนิยายจากภาษาอังกฤษเป็นภาษาไทย: กรณีศึกษานวนิยายแปลเรื่อง แอนิมอล ฟาร์ม สงครามกบฏ ของสรรพสัตว์ ของ บัญชา สุวรรณานนท์ และเรื่อง แอนิมอล ฟาร์ม ของ เพชร ภาษพิรัช
Creators: name: ทิวา ใจหลัก
Publisher: name: Huachiew Chalermprakiet University
Year: 2024
Subjects: เพศสภาพ
กลวิธีการแปล
หน่วยสร้างประโยคกรรมวาจก
แอนิมอลฟาร์ม

description: Academic and Research Journal of Liberal Arts, 19, 1, 162-176
ลักษณะเฉพาะของภาพยนตร์รักแนวท่องเที่ยวของไทยพ.ศ. 2547-2566
Creators: name: Lina, He
Publisher: name: Huachiew Chalermprakiet University
Year: 2024
Subjects: ลักษณะเฉพาะ
ภาพยนตร์ไทย
ภาพยนตร์รักแนวท่องเที่ยว

description: Academic and Research Journal of Liberal Arts, 19, 1, 177-192
VOYAGA YETMAGANLAR O`RTASIDA HUQUQBUZARLIKLARNING KO`PAYISHIGA SABAB OILALARDAGI NOTINCHLIK
Creators: name: Qurbonboyeva, Xumora
Publisher: name: Zenodo
Year: 2024

description: Ushbu maqolada O`zbekistonda kundan-kunga ko`payib borayotgan voyaga yetmaganlar va kichik yoshdagilar o`rtasidagi huquqbuzarliklar, jinoyatlarning oldini olishga qaratilgan profilaktika ishlari hamda kelib chiqish sabablari ya`ni oiladagi yetishmovchiliklar, psixologik travmasi bor bolalar  hamda oilaning ijtimoiy jihati va oiladagi tez-tez bo`lib turadigan janjallari va ularni bartaraf etishga qaratilgan harakatlar haqida batafsil bayon etiladi.
Capitalizing IP– Security Interest and Securitization of Trademarks
Creators: name: Shaaban, Eslam
Publisher: name: Université d'Ottawa / University of Ottawa
Year: 2020
Subjects: Trademarks
Security interests in IP in Canada and the U.S.
Security interests in trademarksin Canada and the U.S.
Capitalizing trademarks
Capitalizing IP
Blockchain
financing of innovations
Securitization of IP

description: One of the main barriers for any innovator or entrepreneur is a lack of funding for their projects. In many cases innovators and entrepreneurs do not have valuable assets that could be presented as collateral to lenders. As well, in many cases innovators and entrepreneurs are not aware of the value of their IP portfolios and how these properties could be developed and economically utilized. Canada is a country with ambitious plans to encourage innovation and enhance economic growth. It is important that Canada develop comprehensive legal and policy frame-works that help innovators and IP creators not only to protect their assets but to use them to raise capital. In fact, the Government of Canada, as investigated in this dissertation, is making significant efforts to develop its intellectual property and innovations paradigms. How-ever, there are barriers and pitfalls in the legal and policy frameworks governing security interests in IP assets in Canada. While there are some minor differences, these problems are shared by most IP assets. In this dissertation, I analyze the pitfalls and barriers in using trademarks, one of the most popular IP assets, as security interests, and do so not only from a theoretical point of view but also from a practical one. In the theoretical analysis I examine the Canadian legal frameworks governing security interests in trademarks as well as those in the United States. I conducted empirical research with all concerned parties having an interest in security interests in trademarks: Canadian lawyers, bankers, government officials and other professionals. This helped me to highlight the gaps and pitfalls in Canadian regulatory and policy frame-works governing security interests in trademarks. The interviews I conducted with these stakeholders also helped me to better shape recommendations to develop and reform the cur-rent frameworks. This dissertation paves the way for future research related to other IP assets such as patents, copyrights and domain names. It also highlights other key points that could help develop and reform current Canadian IP policies and regulations.
D2.8: Guidelines on Open Access and Restricted Data (final)
Creators: name: Baxter, Rob
name: Sacchi, Simone
name: Tjalsma
name: Cavalli, Valentino
name: Lambert, Simon
name: Frew
name: Inglis
Publisher: name: https://b2share.eudat.eu
Year: 2017
Subjects: Policy, restricted data, personal data, GDPR, DataTags

description: This report is a full revision of the earlier D2.5 [Guidelines on Open Access and Restricted Data (draft)] on restricted data. It looks in particular at the new legal requirements for information service providers in storing and processing personal data under the EU General Data Protection Regulation (GDPR), the particular impacts of the GDPR on the EUDAT CDI and EUDAT service providers, and offers a number of supporting policies, technical approaches and guidelines for EUDAT in managing, storing and processing open and restricted data.
Zonation of the hazardous technogenic-geological and engineering-geological processes manifestations for Solotvyno territory
Creators: name: Shekhunova, Stella
name: Aleksieienkova, Marina
name: Yakovliev, Yevhenii
name: Stadnichenko, Svitlana
Publisher: name: Zenodo
Year: 2020
Subjects: Geological Hazards
Subsidence
Karst
Sinkholes
Flooding
Landslides
Erosion

description: Zonation characterizes probability of hazardous technogenic-geological and engineering-geological processes manifestations for Solotvyno territory. It was established on the basis of expert assessment of the former hazardous events frequency and scale, changes of topography and geomorphology, geodetic survey, remote sensing data, satellite imagery, Differential Interferometric Analysis data (DinSAR), provided by Copernicus for the European Union Civil Protection Team advisory mission to Ukraine (2016), authors’ systematic field observations 2008, 2010, 2011, 2016, 2018, 2019 coupled with summarized previous research results.
description: {"references": ["Shekhunova, S.B., Aleksieienkova, M.V., Stadnichenko, S.M., Siumar, N.P., 2015. The integrated geological model of Solotvyno structure as a tool to assess geoecological sustainability of Solotvyno rock-salt deposit. Collection of Scientific Works of the Institute of geological Sciences NAS of Ukraine, 8, Pp. 233-250. DOI: https://doi.org/10.30836/igs.2522-9753.2015.146791 (In Ukrainian)", "Yakovlev, E.O., Shekhunova, S.B., Aleksieienkova, M.V., Siumar, N.P., 2016. Assessment of complex stress-strain state of the Solotvyno salt anticline structure (basing on technique of natural pulse electromagnetic field of the Earth). Collection of Scientific Works of the Institute of geological Sciences NAS of Ukraine, 9, Pp. 83-96. DOI: https://doi.org/10.30836/igs.2522-9753.2016.144246 (In Ukrainian)", "Ukrainian StateGeoCadastre data", "GeoInform Archive data"]}
title: Nuclear reactions in the storage ring ESR with EXL
Creators: name: Kröll, Th.
name: Schmid, M. von
name: Zamora, J. C.
name: Bagchi, S.
name: Bönig, S.
name: Csatlós, M.
name: Dillmann, I.
name: Dimopoulou, C.
name: Egelhof, P.
name: Eremin, V.
name: Furuno, T.
name: Geissel, H.
name: Gernhäuser, R.
name: Harakeh, M. N.
name: Hartig, A. L.
name: Ilieva, S.
name: Kalantar-Nayestanaki, N.
name: Kiselev, O.
name: Kollmus, H.
name: Kozhuharov, C.
name: Krasznahorkay, A.
name: Kuilman, M.
name: Litvinov, S.
name: Litvinov, Yu A.
name: Mahjour-Shafiei, M.
name: Mutterer, M.
name: Nagae, D.
name: Najafi, M. A.
name: Nociforo, C.
name: Nolden, F.
name: Popp, U.
name: Rigollet, C.
name: Roy, S.
name: Scheidenberger, C.
name: Steck, M.
name: Streicher, B.
name: Stuhl, L.
name: Thürauf, M.
name: Uesaka, T.
name: Weick, H.
name: Winfield, J. S.
name: Winters, D.
name: Woods, P. J.
name: Yamaguchi, T.
name: Yue, K.
name: Zenihiro, J.
Publisher: name: IOP Publishing
Year: 2024

description: The EXL project aims to study nuclear structure by direct reactions in inverse kinematics at the storage rings of the future FAIR facility. In this contribution, we present the status of the project: the technical implementation at the ESR at GSI and preliminary results of the EXL campaign in 2012, the first using also a radioactive beam.
Skizze einer neuen Systematik der Demonstrativa im Lateinischen nebst Bemerkungen zu falschen und irreführenden Darstellungen der lateinischen Demonstrativpronomina in Schulbüchern
Creators: name: Burkard, Thorsten
Publisher: name: Forum Classicum
Year: 2024

description: Forum Classicum, Nr. 4 (2023): Forum Classicum
D2.7: Certification Implementation Report
Creators: name: Tjalsma, Heiko
Publisher: name: https://b2share.eudat.eu
Year: 2018
Subjects: DSA, CTS, certification, trust

description: In this deliverable the question is answered how trustworthiness by means of DSA certification can be achieved within the EUDAT infrastructure. This turned out to be a complicated issue. A partial solution has been found for making the EUDAT services trustworthy for data repositories wanting to user these services for (long-term) storage.
ศักยภาพการตลาดเชิงประสบการณ์ที่ส่งผลต่อการกลับมาเที่ยวซ้ำของนักท่องเที่ยวเชิงอาหารในจังหวัดพัทลุง
Creators: name: จันทร์จิตต์ ฐนะศิริ
Publisher: name: Huachiew Chalermprakiet University
Year: 2024
Subjects: การท่องเที่ยวเชิงอาหาร
การตลาดเชิงประสบการณ์
การกลับมาเที่ยวซ้ำ

description: Academic and Research Journal of Liberal Arts, 19, 1, 193-208
บทบาทหน้าที่ของคติชนในมหาวิทยาลัย: กรณีศึกษา มหาวิทยาลัยการกีฬาแห่งชาติ วิทยาเขตสุโขทัย
Creators: name: สุรเชษฐ์ คูหาเลิศ
Publisher: name: Huachiew Chalermprakiet University
Year: 2024
Subjects: คติชนในมหาวิทยาลัย
บทบาทหน้าที่ของคติชน
มหาวิทยาลัยการกีฬาแห่งชาติ

description: Academic and Research Journal of Liberal Arts, 19, 1, 209-230
Endogenous Hormonal Changes in Grain Development
Creators: name: Gutam, Sridhar
Publisher: name: figshare
Year: 2015
Subjects: subject: Physiology
subject: FOS: Biological sciences
subject: Botany
subject: Plant Biology

description: Endogenous Hormonal Changes in Grain Development: Studies with Wheat Genotypes
D9.5: Final Report on the Applicability of Object Stores within EUDAT
Creators: name: Brzezniak, Maciej (PSNC)
Publisher: name: https://b2share.eudat.eu
Year: 2017
Subjects: Object stores, B2SAFE, scalability, reliability, performance

description: In this deliverable a summary of the work done by Task 9.1.1 of EUDAT’s Work Package 9 (WP9) which, in accordance with the project’s description of work (DoW), examined the applicability of object stores for implementing the EUDAT Collaborative Data Infrastructure (CDI) and assessed the potential of this technology to improve CDI architecture components or to replace their current implementations, is provided.
This task was a part of WP9’s activities that looked into modern architectures and technologies in order to examine and evaluate their usability for providing the basis for low-maintenance-cost, functionality-rich and high-quality EUDAT services for EUDAT’s user communities. In this wider context, T9.1.1 analysed the potential impact of applying object stores to the architecture and implementation of particular EUDAT services (namely B2SAFE, B2SHARE, and B2DROP) and also provided a view on possible architecture developments for the EUDAT CDI in the future.
T9.1.1 was a task spanning 24 months. In this M24 deliverable the final conclusions of that work, based on activities conducted in the 2nd year of this phase of the EUDAT project, including further analysis of the technology, and proofs of concept with regard to selected areas of the application of object stores, as well as discussions of the results, concepts and ideas worked out during the first year of the work on this task, are reported.
D8.3: Report on Design Model and Definition of Data Directives
Creators: name: Le Franc, Yann
name: Cortes, Toni
name: Rajapakse, Asela
name: Chernov, Alexandr
name: Queralt, Anna
name: Dima, Emanuel
name: Pivan, Xavier
name: Pagé, Christian
name: Ezelin, Johann
Publisher: name: https://b2share.eudat.eu
Year: 2018
Subjects: Data Life Cycle, provenance, directives, rule languages, rule engines

description: Based on the work described in D8.1 and D8.2, we developed initial prototypes for modeling Data Life Cycles and directives. In this document, we are describing both the processes and the results of this initial implementation. We will discuss the issues we faced in developing these prototypes and the technical choices we made. This deliverable provides an overview of the current status of the work. This work has been used as a basis for concrete implementations of community use-cases, described in D8.6.
PROCEDIMIENTO NORMALIZADO DE TRABAJO. CULTIVO CUANTITATIVO DE ORINA PARA ESTUDIO DE MICROORGANISMOS AEROBIOS/FACULTATIVOS DE CRECIMIENTO RÁPIDO
Creators: name: Gutiérrez-Fernández, José
name: Mª Dolores Rojo Martín
name: Mª Fe Bautista Marín
Publisher: name: figshare
Year: 2015
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Medicine
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Describir el método de procesamiento, lectura, interpretación y emisión de los resultados en el cultivo cuantitativo de muestras de orina para el diagnóstico de infección del tracto urinario (ITU) producida por microorganismos aerobios/facultativos de crecimiento rápido.
“จีนตั้วเหี่ย” ภาพสะท้อนบทบาทและอิทธิพลของชาวจีนโพ้นทะเล ในสมัยต้นรัตนโกสินทร์ (รัชกาลที่ 3-4)
Creators: name: สำราญ ผลดี
Publisher: name: Huachiew Chalermprakiet University
Year: 2024
Subjects: จีนตั้วเหี่ย
สมาคมลับ
ชาวจีนโพ้นทะเล

description: Academic and Research Journal of Liberal Arts, 19, 1, 231-246
D8.2: Report on Technology Watch
Creators: name: Le Franc, Yann
name: Schentz, Herbert
name: Rajapakse, Asela
name: Dima, Emanuel
name: Goldfarb, Doron
name: Wohner, Christoph
name: Queralt, Anna
name: Miranda, Alberto
name: Cortes, Toni
Publisher: name: https://b2share.eudat.eu
Year: 2017
Subjects: Data Life Cycle models, Provenance, Dynamic Data, Graph stores, Rule Engines, Directives, Rule Languages

description: The aim of this deliverable is to present a summary of the different technological approaches that EUDAT investigated to support the design of the prototype services and data models identified in D8.1 and implemented in task 8.2 (D8.3, data models) and task 8.4 (D8.4, service design and prototypes).
This document presents the two distinct but related topics of investigation: the existing data models that could support the design of DLC models and a directive language, as well as the existing technologies to support the usage of graph-based data, workflow descriptions, directives, semantic resources and dynamic data.
These descriptions are not meant to be exhaustive but reflect the results of our current state of knowledge.
PROCEDIMIENTO NORMALIZADO DE TRABAJO CULTIVO CUANTITATIVO DE ORINA PARA ESTUDIO DE MICROORGANISMOS AEROBIOS/FACULTATIVOS DE CRECIMIENTO RÁPIDO
Creators: name: Gutiérrez-Fernández, José
name: Mª Dolores Rojo Martín
name: Mª Fe Bautista Marín
Publisher: name: figshare
Year: 2015
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Medicine
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Describir el método de procesamiento, lectura, interpretación y emisión de los resultados en el cultivo cuantitativo de muestras de orina para el diagnóstico de infección del tracto urinario (ITU) producida por microorganismos aerobios/facultativos de crecimiento rápido.
D7.4: EUDAT/EGI Final Report on the Joint Call for Proposals
Creators: name: Barth, Michaela (SNIC)
Publisher: name: https://b2share.eudat.eu
Year: 2018
Subjects: Cross-Infrastructure Services, Joint Access to Data, HTC, Cloud Computing

description: This document describes the work undertaken by Task 7.2 "Joint Access to Data, HTC and Cloud Computing Resources" within the EUDAT2020 project focusing on the interoperability between EUDAT and EGI. The main objective of the conducted work was to realize cross-infrastructure services that enable the desired perceived seamless access to a combined infrastructure offering by both EGI and EUDAT services in pairing their data and high-throughput computing resources together.
This document concentrates on the phase after the definition of the generic use case and depicts in detail the challenges encountered by the early adopters, the resulting new requirements and the identified solutions.
D7.3: EUDAT/PRACE Joint Call for Proposals
Creators: name: Fiameni, Giuseppe (CINECA)
name: Coutin, Stephané (CINES)
name: Morelli, Giovanni (CINECA)
name: Jankowski, Michal (PSNC)
Publisher: name: https://b2share.eudat.eu
Year: 2018
Subjects: Cross-Infrastructure Services, Joint Access to Data, HTC, Cloud Computing

description: This document describes the work undertaken by Task 7.1 "Joint Access to Data and HPC Services" within the EUDAT2020 project focusing on the definition of synergies with other EU e-infrastructures and mostly on the interoperability achieved between EUDAT and PRACE. The main objective of this conducted work was to realize cross-infrastructure services that enable the required seamless access to a combined infrastructure offering in pairing the available data and high-performance computing resources.
Functional specialization of chordate CDK1 paralogs during oogenic meiosis
Creators: name: Øvrebø, Jan Inge
name: Campsteijn, Coen
name: Kourtesis, Ioannis
name: Hausen, Harald
name: Raasholm, Martina
name: Thompson, Eric M
Publisher: name: Taylor & Francis
Year: 2015
Subjects: subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Cancer
subject: Developmental Biology
subject: Biological Sciences
subject: Genetics
subject: FOS: Biological sciences
subject: Cell Biology
subject: Medicine
subject: Biophysics

description: ABSTRACTCyclin-dependent kinases (CDKs) are central regulators of eukaryotic cell cycle progression. In contrast to interphase CDKs, the mitotic phase CDK1 is the only CDK capable of driving the entire cell cycle and it can do so from yeast to mammals. Interestingly, plants and the marine chordate, Oikopleura dioica, possess paralogs of the highly conserved CDK1 regulator. However, whereas in plants the two CDK1 paralogs replace interphase CDK functions, O. dioica has a full complement of interphase CDKs in addition to its five odCDK1 paralogs. Here we show specific sub-functionalization of odCDK1 paralogs during oogenesis. Differential spatiotemporal dynamics of the odCDK1a, d and e paralogs and the meiotic polo-like kinase 1 (Plk1) and aurora kinase determine the subset of meiotic nuclei in prophase I arrest that will seed growing oocytes and complete meiosis. Whereas we find odCDK1e to be non-essential, knockdown of the odCDK1a paralog resulted in the spawning of non-viable oocytes of reduced size. Knockdown of odCDK1d also resulted in the spawning of non-viable oocytes. In this case, the oocytes were of normal size, but were unable to extrude polar bodies upon exposure to sperm, because they were unable to resume meiosis from prophase I arrest, a classical function of the sole CDK1 during meiosis in other organisms. Thus, we reveal specific sub-functionalization of CDK1 paralogs, during the meiotic oogenic program.
PROCEDIMIENTO NORMALIZADO DE TRABAJO. CULTIVO CUANTITATIVO DE ORINA PARA ESTUDIO DE MICROORGANISMOS AEROBIOS/FACULTATIVOS DE CRECIMIENTO RÁPIDO
Creators: name: Gutiérrez-Fernández, José
name: Mª Dolores Rojo Martín
name: Mª Fe Bautista Marín
Publisher: name: figshare
Year: 2016
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Medicine
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Describir el método de procesamiento, lectura, interpretación y emisión de los resultados en el cultivo cuantitativo de muestras de orina para el diagnóstico de infección del tracto urinario (ITU) producida por microorganismos aerobios/facultativos de crecimiento rápido.
Functional specialization of chordate CDK1 paralogs during oogenic meiosis
Creators: name: Øvrebø, Jan Inge
name: Campsteijn, Coen
name: Kourtesis, Ioannis
name: Hausen, Harald
name: Raasholm, Martina
name: Thompson, Eric M
Publisher: name: Taylor & Francis
Year: 2015
Subjects: subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Cancer
subject: Developmental Biology
subject: Biological Sciences
subject: Genetics
subject: FOS: Biological sciences
subject: Cell Biology
subject: Medicine
subject: Biophysics

description: Cyclin-dependent kinases (CDKs) are central regulators of eukaryotic cell cycle progression. In contrast to interphase CDKs, the mitotic phase CDK1 is the only CDK capable of driving the entire cell cycle and it can do so from yeast to mammals. Interestingly, plants and the marine chordate, Oikopleura dioica, possess paralogs of the highly conserved CDK1 regulator. However, whereas in plants the 2 CDK1 paralogs replace interphase CDK functions, O. dioica has a full complement of interphase CDKs in addition to its 5 odCDK1 paralogs. Here we show specific sub-functionalization of odCDK1 paralogs during oogenesis. Differential spatiotemporal dynamics of the odCDK1a, d and e paralogs and the meiotic polo-like kinase 1 (Plk1) and aurora kinase determine the subset of meiotic nuclei in prophase I arrest that will seed growing oocytes and complete meiosis. Whereas we find odCDK1e to be non-essential, knockdown of the odCDK1a paralog resulted in the spawning of non-viable oocytes of reduced size. Knockdown of odCDK1d also resulted in the spawning of non-viable oocytes. In this case, the oocytes were of normal size, but were unable to extrude polar bodies upon exposure to sperm, because they were unable to resume meiosis from prophase I arrest, a classical function of the sole CDK1 during meiosis in other organisms. Thus, we reveal specific sub-functionalization of CDK1 paralogs, during the meiotic oogenic program.
Functional specialization of chordate CDK1 paralogs during oogenic meiosis
Creators: name: Øvrebø, Jan Inge
name: Campsteijn, Coen
name: Kourtesis, Ioannis
name: Hausen, Harald
name: Raasholm, Martina
name: Thompson, Eric M
Publisher: name: Taylor & Francis
Year: 2015
Subjects: subject: Biophysics
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Cyclin-dependent kinases (CDKs) are central regulators of eukaryotic cell cycle progression. In contrast to interphase CDKs, the mitotic phase CDK1 is the only CDK capable of driving the entire cell cycle and it can do so from yeast to mammals. Interestingly, plants and the marine chordate, Oikopleura dioica, possess paralogs of the highly conserved CDK1 regulator. However, whereas in plants the 2 CDK1 paralogs replace interphase CDK functions, O. dioica has a full complement of interphase CDKs in addition to its 5 odCDK1 paralogs. Here we show specific sub-functionalization of odCDK1 paralogs during oogenesis. Differential spatiotemporal dynamics of the odCDK1a, d and e paralogs and the meiotic polo-like kinase 1 (Plk1) and aurora kinase determine the subset of meiotic nuclei in prophase I arrest that will seed growing oocytes and complete meiosis. Whereas we find odCDK1e to be non-essential, knockdown of the odCDK1a paralog resulted in the spawning of non-viable oocytes of reduced size. Knockdown of odCDK1d also resulted in the spawning of non-viable oocytes. In this case, the oocytes were of normal size, but were unable to extrude polar bodies upon exposure to sperm, because they were unable to resume meiosis from prophase I arrest, a classical function of the sole CDK1 during meiosis in other organisms. Thus, we reveal specific sub-functionalization of CDK1 paralogs, during the meiotic oogenic program.
Common Factor Analysis versus Principal Component Analysis: A Comparison of Loadings by Means of Simulations
Creators: name: Winter, Joost C. F. De
name: Dodou, Dimitra
Publisher: name: Taylor & Francis
Year: 2015
Subjects: subject: Developmental Biology
subject: Mathematics
subject: FOS: Mathematics
subject: Cell Biology
subject: Microbiology
subject: FOS: Biological sciences

description: Common factor analysis (CFA) and principal component analysis (PCA) are widely used multivariate techniques. Using simulations, we compared CFA with PCA loadings for distortions of a perfect cluster configuration. Results showed that nonzero PCA loadings were higher and more stable than nonzero CFA loadings. Compared to CFA loadings, PCA loadings correlated weakly with the true factor loadings for underextraction, overextraction, and heterogeneous loadings within factors. The pattern of differences between CFA and PCA was consistent across sample sizes, levels of loadings, principal axis factoring versus maximum likelihood factor analysis, and blind versus target rotation.
Direct Chemoselective Synthesis of N-3-Substituted Pyrimidinones in a Microwave-Assisted Method
Creators: name: Burgula Laxminarayana
name: Kundu, Lal Mohan
Publisher: name: Taylor & Francis
Year: 2015
Subjects: subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: FOS: Biological sciences
subject: Biological Sciences
subject: Chemistry
subject: Earth and Environmental Sciences
subject: Evolutionary Biology
subject: Biotechnology
subject: Molecular Biology
subject: Cell Biology
subject: Microbiology
subject: Engineering
subject: Biochemistry
subject: Biophysics

description: Synthesis of selectively N-3-substituted pyrimidine nucleobases or pyrimidinones has always been a challenge because of poor regioselectivity and chemoselectivity. In this article we demonstrate a single-step, de novo synthesis of selectively N-3-substituted modified pyrimidinones. We have developed a microwave-assisted methodology for direct, chemoselective alkylation, benzylation, and arylation of C-5 and C-6 substituted pyrimidine nucleobases selectively at the N-3 position. The reactions were found to proceed, with high efficiency, without the requirement of solvent and were complete within 10–15 min of irradiation. The efficiency of the method was further improved by addition of a Lewis acid, which not only increases the yield significantly but also accelerates the reaction rate.
Common factor analysis versus principal component analysis: a comparison of loadings by means of simulations
Creators: name: Winter, Joost C. F. De
name: Dodou, Dimitra
Publisher: name: Taylor & Francis
Year: 2015
Subjects: subject: Developmental Biology
subject: Mathematics
subject: FOS: Mathematics
subject: Cell Biology
subject: Microbiology
subject: FOS: Biological sciences

description: Common factor analysis (CFA) and principal component analysis (PCA) are widely used multivariate techniques. Using simulations, we compared CFA with PCA loadings for distortions of a perfect cluster configuration. Results showed that nonzero PCA loadings were higher and more stable than nonzero CFA loadings. Compared to CFA loadings, PCA loadings correlated weakly with the true factor loadings for underextraction, overextraction, and heterogeneous loadings within factors. The pattern of differences between CFA and PCA was consistent across sample sizes, levels of loadings, principal axis factoring versus maximum likelihood factor analysis, and blind versus target rotation.
Direct Chemoselective Synthesis of N-3 Substituted Pyrimidinones in a Microwave-Assisted Method
Creators: name: Burgula Laxminarayana
name: Kundu, Lal Mohan
Publisher: name: Taylor & Francis
Year: 2015
Subjects: subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: FOS: Biological sciences
subject: Biological Sciences
subject: Chemistry
subject: Earth and Environmental Sciences
subject: Evolutionary Biology
subject: Biotechnology
subject: Molecular Biology
subject: Cell Biology
subject: Microbiology
subject: Engineering
subject: Biochemistry
subject: Biophysics

description: Synthesis of selectively N-3 substituted pyrimidine nucleobases or pyrimidinones were always a challenge, due to poor regioselectivity and chemoselectivity. In this article we demonstrate a single-step, de novo synthesis of selectively N-3 substituted modified pyrimidinones. We have developed a microwave-assisted methodology for direct, chemoselective alkylation, benzylation and arylation of C-5 and C-6 substituted pyrimidine nucleobases selectively at N-3 position. The reactions were found to proceed, with high efficiency, without the requirement of solvent and were complete within 10-15 minutes of irradiation. The efficiency of the method was further improved by addition of a Lewis acid which not only increases the yield significantly but also accelerates the reaction rate.
Season-long consequences of shifts in timing of breeding for productivity in Willow Warblers, Phylloscopus trochilus
Creators: name: Morrison, Catriona A.
name: Robinson, Robert A.
name: Clark, Jacquie A.
name: Leech, Dave I.
name: Gill, Jennifer A.
Publisher: name: Taylor & Francis
Year: 2015
Subjects: subject: Plant Biology
subject: FOS: Biological sciences
subject: Biological Sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Ecology
subject: Earth and Environmental Sciences
subject: Evolutionary Biology

description: Capsule Breeding Willow Warblers, Phylloscopus trochilus, in the UK have advanced in timing of breeding but with little impact on overall productivity.Aims To quantify the impact of shifts in timing of breeding on changes in Willow Warbler productivity across the UK.Methods Using records of ∼7000 nests from the British Trust for Ornithology Nest Record Scheme, we quantify shifts in timing of breeding and seasonal variation in productivity and timing of breeding, and explore their relative contribution to changes in overall productivity. As population trajectories vary across Britain (south-east declining, north-west stable), analyses were conducted regionally.Results In both regions, nesting dates have advanced and early-season productivity is highest. However, while the proportion of early-season nests has increased, the seasonal decline in productivity in the north-west has lessened, and overall (season-long) productivity is stable. In the south-east, however, the seasonal decline in productivity has strengthened and, despite the advance in timing of breeding, overall productivity has declined.Conclusions Advances in timing of breeding have not led to increased Willow Warbler productivity in the UK, because the population-level impact of advances depends on seasonal patterns in both productivity and the distribution of nesting dates within a population.
title: Lean inventory management of an industrial tool distributor in Thailand using a data visualization tool
Creators: name: Kongprasert, Nattapong
name: Garrett, Tuchcha
name: Saengphueng, Sompop
Publisher: name: Publishing House of Poznan University of Technology
Year: 2021

description: Zeszyty Naukowe Politechniki Poznańskiej. Organizacja i Zarządzanie, 84, 111-123
Ecosystem health of Lake Vänern: Past, present and future research
Creators: name: G. Dave
name: M. Munawar
name: S.-Å. Wängberg
Publisher: name: Taylor & Francis
Year: 2015
Subjects: subject: Science Policy
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Marine Biology
subject: Biological Sciences
subject: Ecology
subject: FOS: Biological sciences
subject: Chemistry
subject: Earth and Environmental Sciences

description: The large lakes of Sweden (Vänern, Vättern, Mälaren and Hjälmaren) have been monitored for more than four decades for water quality conditions to assess the impact of eutrophication from anthropogenic activities. Lake Vänern is basically an oligotrophic lake that showed signs of eutrophication, notably the emergence of algal blooms in the coastal areas (1967–1968). The lake was also contaminated, due to the discharge of pulp and paper effluents including metals such as mercury. However, ecosystem-based information is lacking for Lake Vänern. Consequently a symposium was organized in 2012 by the University of Gothenburg, Mötesplats Vänersborg and the Aquatic Ecosystem Health and Management Society to: assess the current status of the health of Lake Vänern's ecosystem, identify knowledge gaps and develop a road map for the future. In this regard, Lake Vänern was compared with the North American Great Lakes to learn from their extensive, long-term data sets. A special issue devoted to the “State of Lake Vänern Ecosystem” symposium was published in Aquatic Ecosystem Health and Management (AEHM, Vol. 17, no. 4) including keynotes and contributed papers. The conclusions shown in the appendix (available in the online supplementary information) summarize the authors' contributions. Most of the articles covered Lake Vänern, but some were directed towards monitoring and management of Great Lakes in general, and others addressed co-operation under the auspices of international agreements and directives. Based on the background information provided by the State of Lake Vänern Ecosystem symposium and its publication in the special issue, the conveners decided that a synthesis of the symposium with recommendations for the future would be useful in boosting ecosystem research in Lake Vänern.
Size-Resolved Penetration Through High-Efficiency Filter Media Typically Used for Aerosol Sampling
Creators: name: N. Zíková
name: J. Ondráček
name: V. Ždímal
Publisher: name: Taylor & Francis
Year: 2015
Subjects: subject: Chemistry
subject: Science Policy
subject: Biological Sciences
subject: Ecology
subject: FOS: Biological sciences
subject: Earth and Environmental Sciences
subject: Biotechnology
subject: Physics
subject: Engineering
subject: Biophysics

description: We have developed a new, fully controlled filter testing device and have used it to measure size-resolved penetration through a typically used filtration media for (but not only) atmospheric aerosol sampling. Twenty membrane and fiber filter pieces (mixed cellulose ester filters, polytetrafluoroethylene filters, quartz fiber filters, glass fiber filters, and polycarbonate filters) of various manufacturers and filter codes were examined. High variability in the penetration curve shapes, most penetrating particle size (MPPS) (from 20 nm to 90 nm) and penetration maxima (from 0.001% to almost 100%) has been found. The dependence of pressure drop on face velocity generally agrees with theory, the comparison of penetration at various face velocities proved the theoretical equations being able to determine MPPS only partially correctly. Although the variability within an individual filter of the same code is not negligible, it is small compared to the differences between the various filter types. The results not only differed from the information provided by the manufacturers, but in many cases also provided information otherwise unavailable, although affecting the sampling and also the ability of comparison with theory. To have enough information for the proper choice of the filter for a given purpose, it would be necessary to have not only total penetration given from the DOP standard measurement, but the MPPS, penetration maximum value and pressure drop as well.Copyright 2015 American Association for Aerosol Research
On evaluating the accuracy and biological plausibility of diffusion MRI tractograms
Creators: name: Daducci, Alessandro
Publisher: name: figshare
Year: 2015
Subjects: subject: Computational Biology
subject: 60102 Bioinformatics
subject: FOS: Computer and information sciences
subject: Diseases
subject: Neuroscience
subject: Health Care
subject: Anatomy

description: One of the major limitations of diffusion MRI tractography is that the tractograms, i.e. set of fiber tracts, recovered by existing algorithms are not truly quantitative. A number of methods have recently started to appear to address this limitation; in particular, COMMIT and LiFE have been developed upon the recently proposed framework that showed how to formulate tractography as an efficient system of linear equations, opening de facto the door for the practical possibility to evaluate and compare the accuracy of the tractograms. This work investigates the importance of using (i) proper multi-compartment models and (ii) adequate multiple b-value acquisitions in order to be able to evaluate the accuracy and the biological plausibility of the tractograms using these global approaches.
Magnetoelastic Resonator@MOF for Advanced Selective and Sensitive Detection Systems.
Creators: name: Sainz, G. Paula
name: Lopes, Catarina
name: Fernandez de Luis, Roberto
name: Gutiérrez, Jon
name: Arriortua, María Isabel
Publisher: name: Zenodo
Year: 2020
Subjects: Metal Organic Frameworks
Toluene
Metglas
Resonator
Sensor

description: Thedevelopmentofminiaturizedsystemsabletospecificallydetectlowamountsofharmfulgasesinawireless,quickandprecisewayisademandinoursociety.Magnetoelasticresonatorsarebecominganattractiveoptionsincethedetectiononthesematerialsiswirelessandfast1.However,inordertodetectaspecificgas,theseresonatorsmustbefunctionalizedwithactivematerialscapableofabsorbinginaselectivewaythedesiredcompound.Inthatway,MetalOrganicFrameworks(MOFs)porousmaterialsaregaininginterestforgasadsorption,duetotheirexcellentpropertiessuchashighsurfaceareas,highporevolumes,lowdensityoreasytunabilityoftheirorganicandinorganicbuildingblocks2.
 ItisclearthatthefunctionalizationoftheresonatorwithagoodMOFlayerisarelevantstepsincethatlayershouldgatheraseriesofproperties,suchhomogeneity,highporosityorgoodadhesion3.Inthiswork,differentfunctionalizationprocessesaswellasdifferentMOFsarecomparedinordertoelucidatethebestfunctionalizationmethod.Thisstudyisthefirststepoffurtherimprovementstowardsfuturegasdetectionusinghighsensitiveandselectivemagnetoelasticdevices.
The Potential for Less Invasive Inference of Resource Use: Covariation in Stable Isotope Composition between Females and Their Eggs in Bluegill
Creators: name: Colborne, Scott F.
name: Hain, Timothy J. A.
name: Longstaffe, Fred J.
name: Neff, Bryan D.
Publisher: name: Taylor & Francis
Year: 2015
Subjects: subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Mathematics
subject: FOS: Mathematics
subject: Biological Sciences
subject: Ecology
subject: FOS: Biological sciences
subject: Chemistry
subject: Earth and Environmental Sciences
subject: Physiology

description: Stable isotope analysis is frequently used to examine resource use in wild populations, but it often involves invasive or lethal methods of collecting tissue samples. The development of less invasive or nonlethal sampling techniques will expand the possible uses of stable isotopes. We examined whether fish eggs meet three basic requirements for inferring female resource use from them: (1) the isotope composition of the eggs is correlated with that of other maternal tissues for which isotope composition is known to be related to diet; (2) the isotope composition remains constant over the egg development period; and (3) dietary inferences using eggs are similar to those for other maternal tissues. Using artificial crosses, we tested the relationship between eggs and two commonly sampled maternal tissues (white muscle and liver) in wild-caught Bluegills Lepomis macrochirus. We found that egg isotope composition was strongly correlated with that of other maternal tissues, particularly liver, and remained constant from prefertilization to the day of hatch, with no change in 13C and an increase of only 0.3‰ in 15N. Furthermore, the results of SIAR (Stable Isotope Analysis in R) mixing models indicated a large degree of overlap in diet estimates between eggs and the other maternal tissues. Overall, eggs can be reliably used to infer the prebreeding foraging ecology of female Bluegills throughout the egg development period.Received July 10, 2014; accepted October 28, 2014
Research Data Spring Workshop 1 Notes Draft/Template
Creators: name: Turner, Andy
name: Blyth, Graham
name: Welburn, Steve
name: Tedds, Jonathan
Publisher: name: figshare
Year: 2015
Subjects: subject: Library and Information Studies
subject: FOS: Media and communications

description: Presentation slides used at the Jisc Research Data Spring Workshop 1 to pitch a proposal for 3 months work to develop Research Data Management practice.