cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Edge crossings in random linear arrangements
Creators: name: Alemany-Puig, Lluís
name: Ferrer-i-Cancho, Ramon
Publisher: name: arXiv
Year: 2019
Subjects: subject: Discrete Mathematics (cs.DM)
subject: Combinatorics (math.CO)
subject: Physics and Society (physics.soc-ph)
subject: FOS: Computer and information sciences
subject: FOS: Mathematics
subject: FOS: Physical sciences

description: In spatial networks vertices are arranged in some space and edges may cross. When arranging vertices in a 1-dimensional lattice edges may cross when drawn above the vertex sequence as it happens in linguistic and biological networks. Here we investigate the general of problem of the distribution of edge crossings in random arrangements of the vertices. We generalize the existing formula for the expectation of this number in random linear arrangements of trees to any network and derive an expression for the variance of the number of crossings in an arbitrary layout relying on a novel characterization of the algebraic structure of that variance in an arbitrary space. We provide compact formulae for the expectation and the variance in complete graphs, complete bipartite graphs, cycle graphs, one-regular graphs and various kinds of trees (star trees, quasi-star trees and linear trees). In these networks, the scaling of expectation and variance as a function of network size is asymptotically power-law-like in random linear arrangements. Our work paves the way for further research and applications in 1-dimension or investigating the distribution of the number of crossings in lattices of higher dimension or other embeddings.
description: Generalised our theory from one-dimensional layouts to practically any type of layout. This helps study the variance of the number of crossings in graphs when their vertices are arranged on the surface of a sphere, or on the plane. Moreover, we also give closed formulae for this variance on particular types of graphs in both linear arrangements and general layouts
Additional file 2 of Prospective and detailed behavioral phenotyping in DDX3X syndrome
Creators: name: Tang, Lara
name: Levy, Tess
name: Guillory, Sylvia
name: Halpern, Danielle
name: Zweifach, Jessica
name: Giserman-Kiss, Ivy
name: Foss-Feig, Jennifer H.
name: Frank, Yitzchak
name: Lozano, Reymundo
name: Belani, Puneet
name: Layton, Christina
name: Lerman, Bonnie
name: Frowner, Emanuel
name: Breen, Michael S.
name: De Rubeis, Silvia
name: Kostic, Ana
name: Kolevzon, Alexander
name: Buxbaum, Joseph D.
name: Siper, Paige M.
name: Grice, Dorothy E.
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 2: Figure S1.Behavioral comorbidities. A. Frequency histograms for the Child Behavior Checklist (CBCL) Internalizing and Externalizing composite scales, Depressive and Anxiety scales, and Attention-Deficit/Hyperactivity and Defiant DSM-oriented scales for ADHD and oppositional defiant disorder. T-scores have a mean of 50 and standard deviation of 10. B. Frequency histograms for the Vineland-3 Internalizing and Externalizing scales. V scores have a mean of 15 and standard deviation of 3. In all plots, higher scores indicate greater deficits. In panels A & B, distribution of standard scores in typically developing individuals are shown as black lines, together with associated standard deviations (dashed lines). PTV, protein-truncating variant; missense, missense variant or in-frame deletion.
MOESM1 of The effectiveness, suitability, and sustainability of non-pharmacological methods of managing pain in community-dwelling older adults: a systematic review
Creators: name: Shuk Tang
name: Tse, Mimi
name: Leung, Sau
name: Fotis, Theofanis
Publisher: name: figshare
Year: 2019
Subjects: subject: Pharmacology
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy

description: Additional file 1. PRISMA 2009 checklist. This was the PRISMA checklist used to report the systematic review.
The Role of Quasar Radiative Feedback on Galaxy Formation during Cosmic Reionization
Creators: name: Chen, Huanqing
Publisher: name: arXiv
Year: 2019
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: Recent observations have found that many $z\sim 6$ quasar fields lack galaxies. This unexpected lack of galaxies may potentially be explained by quasar radiation feedback. In this paper I present a suite of 3D radiative transfer cosmological simulations of quasar fields. I find that quasar radiation suppresses star formation in low mass galaxies, mainly by photo-dissociating their molecular hydrogen. Photo-heating also plays a role, but only after $\sim$100 Myr. However, galaxies which already have stellar mass above $10^5 M_\odot$ when the quasar turns on will not be suppressed significantly. Quasar radiative feedback suppresses the faint end of the galaxy luminosity function (LF) within $1$ pMpc, but to a far lesser degree than the field-to-field variation of the LF. My study also suggests that by using the number of bright galaxies ($M_{1500}
description: 13 pages, 14 figures, comments welcome
A Programmatic and Semantic Approach to Explaining and DebuggingNeural Network Based Object Detectors
Creators: name: Kim, Edward
name: Gopinath, Divya
name: Pasareanu, Corina
name: Seshia, Sanjit
Publisher: name: arXiv
Year: 2019
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: Even as deep neural networks have become very effective for tasks in vision and perception, it remains difficult to explain and debug their behavior. In this paper, we present a programmatic and semantic approach to explaining, understanding, and debugging the correct and incorrect behaviors of a neural network-based perception system. Our approach is semantic in that it employs a high-level representation of the distribution of environment scenarios that the detector is intended to work on. It is programmatic in that scenario representation is a program in a domain-specific probabilistic programming language which can be used to generate synthetic data to test a given perception module. Our framework assesses the performance of a perception module to identify correct and incorrect detections, extracts rules from those results that semantically characterizes the correct and incorrect scenarios, and then specializes the probabilistic program with those rules in order to more precisely characterize the scenarios in which the perception module operates correctly or not. We demonstrate our results using the SCENIC probabilistic programming language and a neural network-based object detector. Our experiments show that it is possible to automatically generate compact rules that significantly increase the correct detection rate (or conversely the incorrect detection rate) of the network and can thus help with understanding and debugging its behavior.
The nuclei of radio galaxies in the UV: the signature of different emission processes
Creators: name: Chiaberge, Marco
name: Macchetto, F. Duccio
name: Sparks, William B.
name: Capetti, Alessandro
name: Allen, Mark G.
name: Martel, Andre' R.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We have studied the nuclei of 28 radio galaxies from the 3CR sample in the UV band. Unresolved nuclei (central compact cores, CCC) are observed in 10 of the 13 FR I, and in 5 of the 15 FR II. All sources that do not have a CCC in the optical, do not have a CCC in the UV. Two FR I (3C 270 and 3C 296) have a CCC in the optical but do not show the UV counterpart. Both of them show large dusty disks observed almost edge-on, possibly implying that they play a role in obscuring the nuclear emission. We have measured optical-UV spectral indices alpha_o,UV between ~0.6 and ~7.0. BLRG have the flattest spectra and their values of alpha_o,UV are also confined to a very narrow range. This is consistent with radiation produced in a geometrically thin, optically thick accretion disk. On the other hand, FR I nuclei, which are most plausibly originated by synchrotron emission from the inner relativistic jet, show a wide range of alpha_o,UV. There is a clear trend with orientation in that sources observed almost edge-on or with clear signs of dust absorption have the steepest spectra. These observations imply that in FR I obscuration can be present, but the obscuring material is not in a ``standard'' geometrically thick torus. The most striking difference between these absorbing structures and the classic AGN ``tori'' resides in the lower optical depth of the FR I obscuring material.
description: 15 pages, 4 figures, accepted for publication on ApJ
Thermal conductivity of MgO in giant planetary interior conditions predicted by deep potential
Creators: name: Qiu, Rong
name: Zeng, Qiyu
name: Chen, Ke
name: Yu, Xiaoxiang
name: Dai, Jiayu
Publisher: name: arXiv
Year: 2023
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences

description: Thermal conductivity $κ$ of MgO plays a fundamental role in understanding the thermal evolution and mantle convection in the interior of terrestrial planets. However, previous theoretical calculations deviate from each other and the $κ$ of high-pressure B2 phase remains undetermined. Here, by combining molecular dynamics and deep potential trained with first-principles data, we systematically investigate the $κ$ of MgO from ambient state to the core-mantle boundary (CMB) of super-Earth with $5M_{\oplus}$. We point out the significance of 4-phonon scatterings and modify the conventional thermal conductivity model of MgO by considering the density-dependent proportion of 3-phonon and 4-phonon scatterings. The $κ$ profiles of MgO in Earth and super-Earth are further estimated. For super-Earth, we predict a significant reduction of $κ$ at the B1-B2 phase transition area near the CMB. This work provides new insights into thermal transport under extreme conditions and an improved thermal model for terrestrial planets.
description: 4 figures
The Vortex Phase Diagram of Rotating Superfluid $^3$He-B
Creators: name: Regan, Robert C.
name: Wiman, J. J.
name: Sauls, J. A.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: We present the first theoretical calculation of the pressure-temperature-field phase diagram for the vortex phases of rotating superfluid $^3$He-B. Based on a strong-coupling extension of the Ginzburg-Landau theory that accounts for the relative stability of the bulk A and B phases of $^3$He at all pressures, we report calculations for the internal structure and free energies of distinct broken-symmetry vortices in rotating superfluid $^3$He-B. Theoretical results for the equilibrium vortex phase diagram in zero field and an external field of $H=284\,\mbox{G}$ parallel to the rotation axis, $\vec{H}\parallel\vecΩ$, are reported, as well as the supercooling transition line, $T^{*}_ {v} (p,H)$. In zero field the vortex phases of $^3$He-B are separated by a first-order phase transition line $T_ {v} (p)$ that terminates on the bulk critical line $T_{c}(p)$ at a triple point. The low-pressure, low-temperature phase is characterized by an array of singly-quantized vortices that spontaneously breaks axial rotation symmetry, exhibits anisotropic vortex currents and an axial current anomaly (D-core phase). The high-pressure, high-temperature phase is characterized by vortices with both bulk A phase and $β$ phase in their cores (A-core phase). We show that this phase is metastable and supercools down to a minimum temperature, $T^{*}_ {v} (p,H)$, below which it is globally unstable to an array of D-core vortices. For $H\gtrsim 60\,\mbox{G}$ external magnetic fields aligned along the axis of rotation increase the region of stability of the A-core phase of rotating $^3$He-B, opening a window of stability down to low pressures. These results are compared with the experimentally reported phase transitions in rotating $^3$He-B.
description: 14 pages, 11 figures
Additional file 5: of Differential expression of Cosmc, T-synthase and mucins in Tn-positive colorectal cancers
Creators: name: Sun, Xiaodong
name: Ju, Tongzhong
name: Cummings, Richard
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Virology

description: Summary of the expression of Tn and STn antigens and T-synthase/Cosmc in human colorectal cancer samples. A Table containing the antigen expression and changes in expression in all of the anonymous case studies. (DOCX 21 kb)
Effective field theory and scalar extensions of the top quark sector
Creators: name: Englert, Christoph
name: Galler, Peter
name: White, Chris D.
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: Effective field theory (EFT) approaches are widely used at the LHC, such that it is important to study their validity, and ease of matching to specific new physics models. In this paper, we consider an extension of the SM in which a top quark couples to a new heavy scalar. We find the dimension six operators generated by this theory at low energy, and match the EFT to the full theory up to NLO precision in the simplified model coupling. We then examine the range of validity of the EFT description in top pair production, finding excellent validity even if the scalar mass is only slightly above LHC energies, provided NLO corrections are included. In the absence of the latter, the LO EFT overestimates kinematic distributions, such that over-optimistic constraints on BSM contributions are obtained. We next examine the constraints on the EFT and full models that are expected to be obtained from both top pair and four top production at the LHC, finding for low scalar masses that both processes show similar exclusion power. However, for larger masses, estimated LHC uncertainties push constraints into the non-perturbative regime, where the full model is difficult to analyse, and thus not perturbatively matchable to the EFT. This highlights the necessity to improve uncertainties of SM hypotheses in top final states.
description: 12 pages, 9 figures, v2: version published in PRD
MOESM2 of The effectiveness, suitability, and sustainability of non-pharmacological methods of managing pain in community-dwelling older adults: a systematic review
Creators: name: Shuk Tang
name: Tse, Mimi
name: Leung, Sau
name: Fotis, Theofanis
Publisher: name: figshare
Year: 2019
Subjects: subject: Pharmacology
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy

description: Additional file 2: Table S1. Results of the Included Studies.
Disorder-induced rounding of certain quantum phase transitions
Creators: name: Vojta, Thomas
Publisher: name: arXiv
Year: 2002
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: We study the influence of quenched disorder on quantum phase transitions in systems with over-damped dynamics. For Ising order parameter symmetry disorder destroys the sharp phase transition by rounding because a static order parameter can develop on rare spatial regions. This leads to an exponential dependence of the order parameter on the coupling constant. At finite temperatures the static order on the rare regions is destroyed. This restores the phase transition and leads to a double-exponential relation between critical temperature and coupling strength. We discuss the behavior based on Lifshitz-tail arguments and illustrate the results by simulations of a model system.
description: 4 pages, 3 eps figures
Nonstandard neutrino interactions and mu-tau reflection symmetry
Creators: name: Liao, Jiajun
name: Nath, Newton
name: Wang, TseChun
name: Zhou, Ye-Ling
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Nonstandard interactions (NSIs), possible subleading effects originating from new physics beyond the Standard Model, may affect the propagation of neutrinos and eventually contribute to measurements of neutrino oscillations. Besides this, $ μ-τ$ reflection symmetry, naturally predicted by non-Abelian discrete flavor symmetries, has been very successful in explaining the observed leptonic mixing patterns. In this work, we study the combined effect of both. We present an $S_4$ flavor model with $μ-τ$ reflection symmetry realized in both neutrino masses and NSIs. Under this formalism, we perform a detailed study for the upcoming neutrino experiments DUNE and T2HK. Our simulation results show that under the $μ-τ$ reflection symmetry, NSI parameters are further constrained and the mass ordering sensitivity is less affected by the presence of NSIs.
description: 24 pages, 6 figures. Version to appear in PRD
Improving Factual Consistency of News Summarization by Contrastive Preference Optimization
Creators: name: Feng, Huawen
name: Fan, Yan
name: Liu, Xiong
name: Lin, Ting-En
name: Yao, Zekun
name: Wu, Yuchuan
name: Huang, Fei
name: Li, Yongbin
name: Ma, Qianli
Publisher: name: arXiv
Year: 2023
Subjects: subject: Computation and Language (cs.CL)
subject: Artificial Intelligence (cs.AI)
subject: FOS: Computer and information sciences

description: Despite the recent progress in news summarization made by large language models (LLMs), they often generate summaries that are factually inconsistent with original articles, known as "hallucinations" in text generation. Unlike previous small models (e.g., BART, T5), current LLMs make fewer silly mistakes but more sophisticated ones, such as imposing cause and effect, adding false details, overgeneralizing, etc. These hallucinations are challenging to detect through traditional methods, which poses great challenges for improving the factual consistency of text summarization. In this paper, we propose Contrastive Preference Optimization (CPO) to disentangle the LLMs' propensities to generate faithful and fake content. Furthermore, we adopt a probing-based specific training method to improve their capacity of distinguishing two types of propensities. In this way, LLMs can execute the instructions more accurately and have enhanced perception of hallucinations. Experimental results show that CPO significantly improves the reliability of summarization based on LLMs.
Tōkyō machiwake ezu 25
東京町分繪圖
Creators: name: Tomatsu, Masanori, Active 19th Century
Publisher: name: Edo : Owariya Seishichi
Year: 2015

description: Covers attached; title on covers and case. 30 maps and wrappers in a case of paulownia wood, with a removable door ; 18.7 x 11 x 22.7 cm. Contents: 日本橋北内神田両國濱町明細繪圖 -- 八丁堀霊岸嶋日本橋南之繪圖 -- 東都番町大繪圖 -- 麹町永田町外櫻田繪圖 -- 今井谷市兵衛町赤坂全圖 -- 市谷牛込繪圖 -- 飯田町駿河臺小川町繪圖 -- 東都麻布之繪圖 -- 東都青山繪圖 -- 御曲輪内大名小路繪圖 -- 千駄ヶ谷鮫ヶ橋四ツ谷繪圖 -- 京橋南築地鐡炮洲繪圖 -- 目黒白金圖 -- 芝口南西久保愛宕下之圖 -- 芝三田二本榎高輪邊繪圖 -- 東都小石川繪圖 -- 雑司ヶ谷音羽繪圖 -- 礫川牛込小日向繪圖 -- 東都下谷繪圖 -- 小石川谷中本郷繪圖 -- 本所繪圖 -- 隅田川向嶋繪圖 -- 東都浅草繪圖 -- 今戸箕輪浅草繪圖 -- 根岸谷中日暮里豊島邊圖 -- 染井王子巣鴨邊繪圖 -- 本所深川繪圖 -- 内藤新宿千駄ヶ谷邊圖 -- 東都駒込邊繪圖 -- 牛込市谷大久保繪圖. Cited in: WSN; 297-298
Survival-extinction phase transition in a bit-string population with mutation
Creators: name: Fehsenfeld, Kathia M.
name: Dickman, Ronald
name: Bernardes, Americo T.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Quantitative Biology (q-bio)
subject: FOS: Physical sciences
subject: FOS: Biological sciences

description: A bit-string model for the evolution of a population of haploid organisms, subject to competition, reproduction with mutation and selection is studied, using mean field theory and Monte Carlo simulations. We show that, depending on environmental flexibility and genetic variability, the model exhibits a phase transtion between extinction and survival. The mean-field theory describes the infinite-size limit, while simulations are used to study quasi-stationary properties.
description: 11 pages, 5 figures
Lagrange point stability for a rotating host mass binary
Creators: name: Strong, Martin D.
name: Crescimanno, Michael
Publisher: name: arXiv
Year: 2019
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: In this new era of gravitational wave astrophysics, observations have indicated the likely existence of black holes with significant spin. In order to better understand the potential imprint orbital dynamics have on the multi-messenger data, we include rotation of the primary mass to leading order in the analysis of the stability boundary pertaining to the triangular equilibrium points, L_4 and L_5, in the relativistic, restricted, circular three body problem. For Lagrange point stability these rotation effects are of the same order as the leading order relativistic corrections ignoring rotation and make both L_4 and L_5 more stable for retrograde orbital motion.
description: Version accepted for publication in PRD
Phyllocoptruta morindae Keifer 1977
Creators: name: Xue, Xiao-Feng
name: Zhang, Zhi-Qiang
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Trombidiformes
Eriophyidae
Phyllocoptruta
Phyllocoptruta morindae

description: Phyllocoptruta morindae Keifer, 1977
 Phyllocoptruta morindae Keifer, 1977b: 13–14.
 Phyllocoptruta morindae; Keifer & Knorr, 1978: 18.
 Phyllocoptruta morindae; Amrine & Stasny, 1994: 260.
 Host. Morinda citrifolia (Rubiaceae).
 Habit. Vagrant.
 Distribution. Thailand (Bangkok).
description: Published as part of Xue, Xiao-Feng & Zhang, Zhi-Qiang, 2009, 2257, pp. 1-128 in Zootaxa 2257 on pages 73-74
Detecting Topological Superconductivity via Berry Curvature Effects in Spectral Functions
Creators: name: Liao, Yunxiang
name: Hsu, Yi-Ting
Publisher: name: arXiv
Year: 2023
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: Experimental efforts on topological superconductivity (TSC) have primarily focused on the detection of Majorana boundary modes, while the bulk properties of TSC - particularly in two dimensions (2D) - remain relatively underexplored. In this work, we theoretically propose a distinctive signature in the spectral function away from the boundaries, capable of detecting 2D chiral p-wave TSC induced in a Rashba spin-orbit-coupled (SOC) heterostructure. This signature can be probed experimentally through angle-resolved photoemission spectroscopy or momentum- and energy-resolved tunneling spectroscopy under a weak magnetic field B. We show that within the topological phase, the spectral intensity of the lowest superconducting band at small momenta k~0 brightens (darkens) linearly with increasing B, whereas it darkens (brightens) in the trivial phase when the Rashba system is electron- (hole-) doped. This sharp contrast arises from the phase-space Berry curvature (BC) of Bogoliubov quasiparticles, a novel quantum geometric property that generalizes the conventional momentum-space BC. The effect of this phase-space BC can also be detected by the differential conductance away from the boundaries. Our falsifiable prediction provides an experimental avenue for detecting Rashba-induced chiral p-wave TSC without relying on Majorana mode detection, addressing a key challenge in the realization of 2D TSC.
description: 13 pages, 4 figures
De Sitter space versus Nariai Black Hole: stability in d5 higher derivative gravity
Creators: name: Nojiri, Shin'ichi
name: Odintsov, Sergei D.
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: d5 higher derivative gravity on the Schwarzschild-de Sitter (SdS) black hole background is considered. Two horizons SdS BHs are not in thermal equilibrium and Hawking-Page phase transitions are not expected there, unlike to the case of AdS BHs. It is demonstrated that there exists the regime of d5 theory where Nariai BH which is extremal limit of SdS BH is stable. It is in the contrast with Einstein gravity on such backgroundwhere only pure de Sitter space is always stable. Speculating on the applications in proposed dS/CFT correspondence, these two (de Sitter and Nariai) stable spaces may correspond to confining-deconfining phases in dual CFT.
description: LaTeX file, 11 pages
Proneotegonotus dipterocarpi Chandrapatya & Boczek 2000
Creators: name: Xue, Xiao-Feng
name: Zhang, Zhi-Qiang
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Actinedida
Eriophyidae
Proneotegonotus
Proneotegonotus dipterocarpi

description: Proneotegonotus dipterocarpi Chandrapatya & Boczek, 2000
 Proneotegonotus dipterocarpi Chandrapatya & Boczek, 2000c: 218, 221–223.
 Host. Dipterocarpus alatus (Dipterocarpaceae).
 Habit. Vagrant.
 Distribution. Thailand (Chon Buri).
description: Published as part of Xue, Xiao-Feng & Zhang, Zhi-Qiang, 2009, 2257, pp. 1-128 in Zootaxa 2257 on page 74
Quadrupole resonances in unstable oxygen isotopes in time-dependent density-matrix formalism
Creators: name: Tohyama, M.
name: Umar, A. S.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: The strength functions of quadrupole modes in the unstable oxygen isotopes 22O and 24O are calculated using an extended version of the time-dependent Hartree-Fock theory known as the time-dependent density-matrix theory (TDDM). It is found that TDDM gives the lowest quadrupole states which are energetically shifted upward and become significantly collective due to the coupling to two-body configurations. It is pointed out that these features of the lowest quadrupole states are similar to those obtained in the quasi-particle random phase approximation.
description: 6 pages, 6 figures
Codensity: Isbell duality, pro-objects, compactness and accessibility
Creators: name: Di Liberti, Ivan
Publisher: name: arXiv
Year: 2019
Subjects: subject: Category Theory (math.CT)
subject: General Topology (math.GN)
subject: Logic (math.LO)
subject: FOS: Mathematics

description: We study codensity monads $T$ induced by (mostly small, mostly dense) full subcategories $A \subset K$. These monads behave quite similarly, we show some connections with the Isbell duality, pro-finite objects and compact spaces. We prove that they are quite unlikely to be accessible. Finally, we introduce the notion of generically idempotent monad and comment its properties.
description: 20 pages. Final version. Accepted by Journal of Pure and Applied Algebra
Petanovicia Boczek 1996
Creators: name: Xue, Xiao-Feng
name: Zhang, Zhi-Qiang
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Actinedida
Diptilomiopidae
Petanovicia

description: Petanovicia Boczek, 1996
 Type species. Petanovicia cerberae Boczek in Boczek & Chandrapatya, 1996b: 84, 85.
 Diagnosis. Body fusiform; scapular setae (sc) and tubercles ahead of rear shield margin, anterior lobe absent; coxae I and coxae II each with 3 setae; empodium entire; opisthosoma with a furrow.
 This genus is monotypic (Amrine et al. 2003).
description: Published as part of Xue, Xiao-Feng & Zhang, Zhi-Qiang, 2009, 2257, pp. 1-128 in Zootaxa 2257 on page 70
Superintegrable Systems on Moduli Spaces of Flat Connections
Creators: name: Arthamonov, S.
name: Reshetikhin, N.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Mathematical Physics (math-ph)
subject: Exactly Solvable and Integrable Systems (nlin.SI)
subject: FOS: Physical sciences
subject: 17B63, 14H70, 17B80

description: The main result of this paper is the construction of a family of superintegrable Hamiltonian systems on moduli spaces of flat connections on a principle $G$-bundle on a surface. The moduli space is a Poisson variety with Atiyah-Bott Poisson structure. Among particular cases of such systems are spin generalizations of Ruijsenaars-Schneider models.
Direct Laplacian Center Gauge
Creators: name: Faber, M.
name: Greensite, J.
name: Olejnik, S.
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We introduce a variation of direct maximal center gauge fixing: the ``direct Laplacian'' center gauge. The new procedure overcomes certain shortcomings of maximal center gauge, associated with Gribov copies, that were pointed out by Bornyakov et al. in hep-lat/0009035.
description: 24 pages, 11 figures, latex2e
Metal abundances and ionization conditions in a possibly dust-free damped Ly-alpha system at z=2.3
Creators: name: Lopez, Sebastian
name: Reimers, Dieter
name: D'Odorico, Sandro
name: Prochaska, Jason X.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We have obtained a high resolution, high S/N UVES spectrum of the bright QSO HE2243-6031 to analyze the damped Ly-alpha system (DLA) observed at z=2.33. The metallicity of this system is 1/12 solar at a neutral hydrogen column density of log N(HI)=20.7. From the observed ratios [Zn/Cr]=-0.01+/-0.05 and [S/Si]=-0.06+/-0.03$ we conclude that dust is very likely absent from the ISM of this protogalaxy. We observe an enhancement of the alpha/Fe-peak ratios of +0.2 dex for various elements, a marked odd-even effect in Mn, and a strong underabundance of N relative to Si and S, [N/Si,S]=-1 at [Si/H]=-0.86. All of these ratios support an environment that is in an early evolutionary stage, where the onset of star formation has begun only shortly before the DLA was observed. We also perform a cloud-by-cloud analysis -- without precedent at high redshift -- and find a tight correlation of all low-ionization species with respect to FeII extending over 2.5 orders of magnitude in N(FeII). We interpret this trend as being due to homogeneous physical conditions (very mild ionization effects, common dust-destruction histories, same chemical composition) and propose that this line of sight encounters absorbing clouds that share a common environment. In addition, photoionization models show that these single clouds are shielded from the external ionizing radiation, so the fraction of ionized gas is small and, except for argon, does not influence the measured metal abundances. The observed AlIII/low-ion ratios suggest the mildly ionized gas occurs in shells surrounding neutral cores of AlII.
description: To be published in A&A
Construction of free curves by adding osculating conics to a given cubic curve
Creators: name: Dimca, Alexandru
name: Ilardi, Giovanna
name: Malara, Grzegorz
name: Pokora, Piotr
Publisher: name: arXiv
Year: 2023
Subjects: subject: Algebraic Geometry (math.AG)
subject: Commutative Algebra (math.AC)
subject: Combinatorics (math.CO)
subject: FOS: Mathematics
subject: 14C20, 14N20, 32S22

description: In the present article we construct new families of free and nearly free curves starting from a plane cubic curve $C$ and adding some of its hyperosculating conics. We present results that involve nodal cubic curves and the Fermat cubic. In addition, we provide new insight into the geometry of the $27$ hyperosculating conics of the Fermat cubic curve using well-chosen group actions.
description: 14 pages, final version incorporating referee's remarks, to appear in International Mathematical Research Notes
Detection of hole pockets in the candidate type-II Weyl semimetal MoTe$_2$ from Shubnikov-de Haas quantum oscillations
Creators: name: Hu, Y. J.
name: Yu, W. C.
name: Lai, Kwing To
name: Sun, D.
name: Balakirev, F. F.
name: Zhang, W.
name: Xie, J. Y.
name: Yip, K. Y.
name: Aulestia, E. I. Paredes
name: Jha, Rajveer
name: Higashinaka, Ryuji
name: Matsuda, Tatsuma D.
name: Yanase, Y.
name: Aoki, Yuji
name: Goh, Swee K.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The bulk electronic structure of $T_d$-MoTe$_2$ features large hole Fermi pockets at the Brillouin zone center ($Γ$) and two electron Fermi surfaces along the $Γ-X$ direction. However, the large hole pockets, whose existence has important implications for the Weyl physics of $T_d$-MoTe$_2$, has never been conclusively detected in quantum oscillations. This raises doubt about the realizability of Majorana states in $T_d$-MoTe$_2$, because these exotic states rely on the existence of Weyl points, which originated from the same band structure predicted by density functional theory (DFT). Here, we report an unambiguous detection of these elusive hole pockets via Shubnikov-de Haas (SdH) quantum oscillations. At ambient pressure, the quantum oscillation frequencies for these pockets are 988 T and 1513 T, when the magnetic field is applied along the $c$-axis. The quasiparticle effective masses $m^*$ associated with these frequencies are 1.50 $m_e$ and 2.77 $m_e$, respectively, indicating the importance of Coulomb interactions in this system. We further measure the SdH oscillations under pressure. At 13 kbar, we detected a peak at 1798 T with $m^*$ = 2.86 $m_e$. Relative to the oscillation data at a lower pressure, the amplitude of this peak experienced an enhancement, which can be attributed to the reduced curvature of the hole pockets under pressure. Combining our experimental data with DFT + $U$ calculations, where $U$ is the Hubbard parameter, our results shed light on why these important hole pockets have not been detected until now.
description: 6 pages, 4 figures. Revised author list. Phys. Rev. Lett. (in press)
title: Fiche Module CESU Illustrator : création de documents vectoriels en SHS"
Creators: name: LabexMed
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020

description: Illustrator : création de documents vectoriels en SHS.
MOESM1 of Analysis of polymorphisms, promoter methylation, and mRNA expression profile of maternal and placental P53 and P21 genes in preeclamptic and normotensive pregnant women
Creators: name: Mahdiyeh Harati-Sadegh
name: Kohan, Leila
name: Batool Teimoori
name: Mehrabani, Mehrnaz
name: Saeedeh Salimi
Publisher: name: figshare
Year: 2019
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Pharmacology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases

description: Additional file 1: Table S1. The frequency of alleles and genotypes of maternal P21-rs1059234, P21-rs1801270 and TP53-rs1042522 polymorphisms in PE women and controls Table S2. The frequency of alleles and genotypes of placental P21-rs1059234, P21-rs1801270 and TP53-rs1042522 polymorphisms in PE women and controls Table S3. The promoter methylation status of the P21 and TP53 genes in PE women and control group (DOCX 18 kb)
Scaling in ordered and critical random Boolean networks
Creators: name: Socolar, Joshua E. S.
name: Kauffman, Stuart A.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Molecular Networks (q-bio.MN)
subject: FOS: Physical sciences
subject: FOS: Biological sciences

description: Random Boolean networks, originally invented as models of genetic regulatory networks, are simple models for a broad class of complex systems that show rich dynamical structures. From a biological perspective, the most interesting networks lie at or near a critical point in parameter space that divides ``ordered'' from ``chaotic'' attractor dynamics. In the ordered regime, we show rigorously that the average number of relevant nodes (the ones that determine the attractor dynamics) remains constant with increasing system size N. For critical networks, our analysis and numerical results show that the number of relevant nodes scales like N^{1/3}. Numerical experiments also show that the median number of attractors in critical networks grows faster than linearly with N. The calculations explain why the correct asymptotic scaling is observed only for very large N.
description: 4 pages, 3 figures; (Re)submitted to Physical Review Letters
Additional file 8: of Aberrantly expressed messengerÂ RNAs and long noncoding RNAs in degenerative nucleus pulposus cells co-cultured with adipose-derived mesenchymal stem cells
Creators: name: Han, Zhihua
name: Wang, Jiandong
name: Gao, Liang
name: Wang, Qiugen
name: Wu, Jianhong
Publisher: name: figshare
Year: 2018
Subjects: subject: Biophysics
subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Pharmacology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Computational Biology

description: Top 20 most important pathways in the Path-net. (DOCX 15 kb)
Phyllocoptes azimae Boczek 1991
Creators: name: Xue, Xiao-Feng
name: Zhang, Zhi-Qiang
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Trombidiformes
Eriophyidae
Phyllocoptes
Phyllocoptes azimae

description: Phyllocoptes azimae Boczek, 1991
 Phyllocoptes azimae Boczek in Chandrapatya & Boczek, 1991c: 450–451, plate 4.
 Host. Azima sarmentosa (Salvadoraceae).
 Habit. Vagrant.
 Distribution. Thailand (Kampaengsan).
description: Published as part of Xue, Xiao-Feng & Zhang, Zhi-Qiang, 2009, 2257, pp. 1-128 in Zootaxa 2257 on page 71
Why Simple Quadrature is just as good as Monte Carlo
Creators: name: Vanslette, Kevin
name: Alsheikh, Abdullatif Al
name: Youcef-Toumi, Kamal
Publisher: name: arXiv
Year: 2019
Subjects: subject: Statistics Theory (math.ST)
subject: Computation (stat.CO)
subject: FOS: Mathematics
subject: FOS: Computer and information sciences

description: We motive and calculate Newton--Cotes quadrature integration variance and compare it directly with Monte Carlo (MC) integration variance. We find an equivalence between deterministic quadrature sampling and random MC sampling by noting that MC random sampling is statistically indistinguishable from a method that uses deterministic sampling on a randomly shuffled (permuted) function. We use this statistical equivalence to regularize the form of permissible Bayesian quadrature integration priors such that they are guaranteed to be objectively comparable with MC. This leads to the proof that simple quadrature methods have expected variances that are less than or equal to their corresponding theoretical MC integration variances. Separately, using Bayesian probability theory, we find that the theoretical standard deviations of the unbiased errors of simple Newton--Cotes composite quadrature integrations improve over their worst case errors by an extra dimension independent factor $\propto N^{-1/2}$. This dimension independent factor is validated in our simulations.
MOESM1 of Lower-body positive pressure diminishes surface blood flow reactivity during treadmill walking
Creators: name: Tajino, Junichi
name: Ito, Akira
name: Torii, Yusuke
name: Tsuchimoto, Koji
name: Iijima, Hirotaka
name: Xiangkai Zhang
name: Tanima, Momoko
name: Shoki Yamaguchi
name: Ieki, Hiroshi
name: Kakinoki, Ryosuke
name: Kuroki, Hiroshi
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: Developmental Biology

description: Additional file 1. Percent weight bearing during standing still. The weight bearing is significantly decreased in accordance with the lower-body positive pressure (LBPP) (ANOVA, p
Exact Boundary Modes in an Interacting Quantum Wire
Creators: name: Rylands, Colin
Publisher: name: arXiv
Year: 2019
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: The boundary modes of one dimensional quantum systems can play host to a variety of remarkable phenomena. They can be used to describe the physics of impurities in higher dimensional systems, such as the ubiquitous Kondo effect or can support Majorana bound states which play a crucial role in the realm of quantum computation. In this work we examine the boundary modes in an interacting quantum wire with a proximity induced pairing term. We solve the system exactly by Bethe Ansatz and show that for certain boundary conditions the spectrum contains bound states localized about either edge. The model is shown to exhibit a first order phase transition as a function of the interaction strength such that for attractive interactions the ground state has bound states at both ends of the wire while for repulsive interactions they are absent. In addition we see that the bound state energy lies within the gap for all values of the interaction strength but undergoes a sharp avoided level crossing for sufficiently strong interaction, thereby preventing its decay. This avoided crossing is shown to occur as a consequence of an exact self-duality which is present in the model.
description: 6 pages
Tōkyō machiwake ezu 19
東京町分繪圖
Creators: name: Tomatsu, Masanori, Active 19th Century
Publisher: name: Edo : Owariya Seishichi
Year: 2015

description: Covers attached; title on covers and case. 30 maps and wrappers in a case of paulownia wood, with a removable door ; 18.7 x 11 x 22.7 cm. Contents: 日本橋北内神田両國濱町明細繪圖 -- 八丁堀霊岸嶋日本橋南之繪圖 -- 東都番町大繪圖 -- 麹町永田町外櫻田繪圖 -- 今井谷市兵衛町赤坂全圖 -- 市谷牛込繪圖 -- 飯田町駿河臺小川町繪圖 -- 東都麻布之繪圖 -- 東都青山繪圖 -- 御曲輪内大名小路繪圖 -- 千駄ヶ谷鮫ヶ橋四ツ谷繪圖 -- 京橋南築地鐡炮洲繪圖 -- 目黒白金圖 -- 芝口南西久保愛宕下之圖 -- 芝三田二本榎高輪邊繪圖 -- 東都小石川繪圖 -- 雑司ヶ谷音羽繪圖 -- 礫川牛込小日向繪圖 -- 東都下谷繪圖 -- 小石川谷中本郷繪圖 -- 本所繪圖 -- 隅田川向嶋繪圖 -- 東都浅草繪圖 -- 今戸箕輪浅草繪圖 -- 根岸谷中日暮里豊島邊圖 -- 染井王子巣鴨邊繪圖 -- 本所深川繪圖 -- 内藤新宿千駄ヶ谷邊圖 -- 東都駒込邊繪圖 -- 牛込市谷大久保繪圖. Cited in: WSN; 297-298
Sr2V3O9 and Ba2V3O9: quasi one-dimensional spin-systems with an anomalous low temperature susceptibility
Creators: name: Kaul, E. E.
name: Rosner, H.
name: Yushankhai, V.
name: Sichelschmidt, J.
name: Shpanchenko, R. V.
name: Geibel, C.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Condensed Matter (cond-mat)
subject: FOS: Physical sciences

description: The magnetic behaviour of the low-dimensional Vanadium-oxides Sr2V3O9 and Ba2V3O9 was investigated by means of magnetic susceptibility and specific heat measurements. In both compounds, the results can be very well described by an S=1/2 Heisenberg antiferromagnetic chain with an intrachain exchange of J = 82 K and J = 94 K in Sr2V3O9 and Ba2V3O9, respectively. In Sr2V3O9, antiferromagnetic ordering at T_N = 5.3 K indicate a weak interchain exchange of the order of J_perp ~ 2 K. In contrast, no evidence for magnetic order was found in Ba2V3O9 down to 0.5 K, pointing to an even smaller interchain coupling. In both compounds, we observe a pronounced Curie-like increase of the susceptibility below 30 K, which we tentatively attribute to a staggered field effect induced by the applied magnetic field. Results of LDA calculations support the quasi one-dimensional character and indicate that in Sr2V3O9, the magnetic chain is perpendicular to the structural one with the magnetic exchange being transferred through VO4 tetrahedra.
description: Submitted to Phy. Rev. B
iPromoter-BnCNN: a Novel Branched CNN Based Predictor for Identifying and Classifying Sigma Promoters
Creators: name: Amin, Ruhul
name: Rahman, Chowdhury Rafeed
name: Sifat, Md. Habibur Rahman
name: Liton, Md Nazmul Khan
name: Rahman, Md. Moshiur
name: Shatabda, Swakkhar
name: Ahmed, Sajid
Publisher: name: arXiv
Year: 2019
Subjects: subject: Quantitative Methods (q-bio.QM)
subject: Machine Learning (cs.LG)
subject: Machine Learning (stat.ML)
subject: FOS: Biological sciences
subject: FOS: Computer and information sciences

description: Promoter is a short region of DNA which is responsible for initiating transcription of specific genes. Development of computational tools for automatic identification of promoters is in high demand. According to the difference of functions, promoters can be of different types. Promoters may have both intra and inter class variation and similarity in terms of consensus sequences. Accurate classification of various types of sigma promoters still remains a challenge. We present iPromoter-BnCNN for identification and accurate classification of six types of promoters - sigma24, sigma28, sigma32, sigma38, sigma54, sigma70. It is a Convolutional Neural Network (CNN) based classifier which combines local features related to monomer nucleotide sequence, trimer nucleotide sequence, dimer structural properties and trimer structural properties through the use of parallel branching. We conducted experiments on a benchmark dataset and compared with two state-of-the-art tools to show our supremacy on 5-fold cross-validation. Moreover, we tested our classifier on an independent test dataset. Our proposed tool iPromoter-BnCNN web server is freely available at http://103.109.52.8/iPromoter-BnCNN. The runnable source code can be found at https://colab.research.google.com/drive/1yWWh7BXhsm8U4PODgPqlQRy23QGjF2DZ.
Ising Hamiltonian Minimization: Gain-Based Computing with Manifold Reduction of Soft-Spins vs Quantum Annealing
Creators: name: Cummins, James S.
name: Salman, Hayder
name: Berloff, Natalia G.
Publisher: name: arXiv
Year: 2023
Subjects: subject: Quantum Physics (quant-ph)
subject: Other Condensed Matter (cond-mat.other)
subject: Computational Physics (physics.comp-ph)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: We investigate the minimization of Ising Hamiltonians, comparing the performance of gain-based computing paradigms based on the dynamics of semi-classical soft-spin models with quantum annealing. We systematically analyze how the energy landscape for the circulant couplings of a Mobius graph evolves with increased annealing parameters. Our findings indicate that these semi-classical models face challenges due to a widening dimensionality landscape. To counteract this issue, we introduce the `manifold reduction' method, which restricts the soft-spin amplitudes to a defined phase space region. Concurrently, quantum annealing demonstrates a natural capability to navigate the Ising Hamiltonian's energy landscape due to its operation within the comprehensive Hilbert space. Our study indicates that physics-inspired or physics-enhanced optimizers will likely benefit from combining classical and quantum annealing techniques.
description: 12 pages, 12 figures; published by Phys. Rev. Research 7, 013150 (2025)