cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
T-dual branes on hyperkähler manifolds
Creators: name: Sisak, Maria Anna
Publisher: name: arXiv
Year: 2024
Subjects: subject: Differential Geometry (math.DG)
subject: Algebraic Geometry (math.AG)
subject: FOS: Mathematics

description: This submission is a PhD dissertation. Kapustin and Witten conjectured that there is a mirror symmetry relation between the hyperkähler structures on certain Higgs bundle moduli spaces. As a consequence, they conjecture an equivalence between categories of BBB and BAA-branes. At the classical level, this mirror symmetry is given by T-duality between semi-flat hyperkähler structures on algebraic integrable systems. In this thesis, we investigate the T-duality relation between hyperkähler structures and the corresponding branes on affine torus bundles. We use the techniques of generalized geometry to show that semi-flat hyperkähler structures are T-dual on algebraic integrable systems. We also describe T-duality for generalized branes. Motivated by Fourier-Mukai transform we upgrade the T-duality between generalized branes to T-duality of submanifolds endowed with U(1)-bundles and connections. This T-duality in the appropriate context specializes to T-duality between BBB and BAA-branes.
description: 137 pages, Comments are welcome
Additional file 1: Figure S1. of Genetic dissection of the neuro-glio-vascular machinery in the adult brain
Creators: name: Kirschen, Gregory
name: KĂŠry, Rachel
name: Liu, Hanxiao
name: Ahamad, Afrinash
name: Chen, Liang
name: Akmentin, Wendy
name: Kumar, Ramya
name: Levine, Joel
name: Xiong, Qiaojie
name: Ge, Shaoyu
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: Mental Health
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology
subject: Computational Biology

description: Comparison of neocortical and hippocampal astrocytes. Figure S2. Intravenous viral injection screen identified CAV2 as a tool to target non-neuronal cells throughout the central nervous system. Figure S3. Specificity of tdTomato expression in intravenous CAV2-labeled tdT-expressing cells. Figure S4. Morphological characterization of intravenous CAV2-labeled tdTomato-expressing cells. Figure S5. Density of blood vessels in the dentate gyrus. Figure S6. Three-pronged interrogation of the neuro-glio-vascular unit. Figure S7. Validation of Coxsackie Adenovirus Receptor expression. Figure S8. Preferential arterial labeling of astrocytes via intravenous CAV2. Figure S9. Diphtheria toxin administration did not significantly affect astrocyte density in wildtype animals. Figure S10. Depletion of astrocytes did not significantly affect cFos expression in the dentate gyrus. Table S1. Viral injection screen to identify candidate virus for astrocyte labeling. (DOCX 52436Â kb)
Additional file 1: of Estimating the total prevalence and incidence of end-stage kidney disease among Aboriginal and non-Aboriginal populations in the Northern Territory of Australia, using multiple data sources
Creators: name: Li, Lin
name: Guthridge, Steven
name: Li, Shu
name: Zhao, Yuejen
name: Lawton, Paul
name: Cass, Alan
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Marine Biology

description: Case definitions of End Stage Kidney Disease. (DOCX 17Â kb)
Additional file 2: of Estimating the total prevalence and incidence of end-stage kidney disease among Aboriginal and non-Aboriginal populations in the Northern Territory of Australia, using multiple data sources
Creators: name: Li, Lin
name: Guthridge, Steven
name: Li, Shu
name: Zhao, Yuejen
name: Lawton, Paul
name: Cass, Alan
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified

description: Number of incident ESKD cases in 4 data sources, Aboriginal population, Northern Territory 2013. (DOCX 17Â kb)
Die Wiederansiedlung der Europäischen Auster
Creators: name: Peter, Corina
name: Pogoda, Bernadette
Publisher: name: German Research Centre for Geosciences GFZ
Year: 2020

description: ESKP-Themenspezial: Biodiversität
description: Bodenschleppnetz-Fischerei und die nicht nachhaltige Entnahme der heimischen Europäischen Auster Ostrea edulis führten dazu, dass die einst weit verbreitete Art in einigen Regionen als inzwischen ausgestorben gilt. Als ökologische Schlüsselart hat sie jedoch viele positive Effekte für andere Pflanzen und Tierarten und leistet wichtige Ökosystemleistungen für ihre gesamte Umwelt. Nun tüfteln Wissenschaftler*innen daran, wie sich diese biogenen Strukturen, die Austern nach und nach bilden, bestmöglich wieder ansiedeln lassen. Auch die kontinuierliche Nachzüchtung der dafür nötigen Larven ist geplant.
Additional file 3 of Community violence and internalizing mental health symptoms in adolescents: A systematic review.
Creators: name: Miliauskas, Claudia Reis
name: Faus, Daniela Porto
name: da Cruz, Valéria Lima
name: do Nascimento Vallaperde, João Gabriel Rega
name: Junger, Washington
name: Lopes, Claudia Souza
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 3.
Was macht ein Meeresschutzgebiet erfolgreich?
Creators: name: Teschke, Katharina
name: Brey, Thomas
Publisher: name: German Research Centre for Geosciences GFZ
Year: 2020

description: ESKP-Themenspezial: Biodiversität
description: Seit den 1990er-Jahren hat sich die Anzahl an Meeresschutzgebieten um das 1,5 fache erhöht und die geschützte Fläche beträgt weltweit derzeit fast 30 Millionen Quadratkilometer. Das entspricht zwar rund 8 Prozent der Ozeanfläche, verschleiert jedoch die Tatsache, dass sehr viele Schutzgebiete relativ klein sind. Der Antarktische Ozean bietet nun die Chance, große Schutzgebiete zum globalen Netzwerk hinzuzufügen.
Additional file 1 of Body composition and functional capacity as determinants of physical activity in middle-aged and older adults: a cross-sectional analysis
Creators: name: Hyvärinen, Matti
name: Kankaanpää, Anna
name: Rantalainen, Timo
name: Rantanen, Taina
name: Laakkonen, Eija K.
name: Karavirta, Laura
Publisher: name: figshare
Year: 2025
Subjects: subject: Biochemistry
subject: Medicine
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Science Policy
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Mental Health
subject: Cardiology

description: Supplementary Material 1
Additional file 3: of Estimating the total prevalence and incidence of end-stage kidney disease among Aboriginal and non-Aboriginal populations in the Northern Territory of Australia, using multiple data sources
Creators: name: Li, Lin
name: Guthridge, Steven
name: Li, Shu
name: Zhao, Yuejen
name: Lawton, Paul
name: Cass, Alan
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified

description: Number of incident ESKD cases in 3 data sources, non-Aboriginal population, Northern Territory 2013. (DOCX 16Â kb)
Estimation de la porosité et de l’absorption d’eau des pierres à l’aide des essais non destructifs : cas de la calcarenite de Volubilis
Creators: name: Aalil, Issam
name: Beck, Kévin
name: Brunetaud, Xavier
name: Cherkaoui, Khalid
name: Chaaba, Ali
name: Al-Mukhtar, Muzahim
Publisher: name: Academic Journal of Civil Engineering
Year: 2020

description: Volubilis est le site archéologique le plus préservé au Maroc. Il est inscrit sur la liste du patrimoine mondial de l'UNESCO depuis 1997. Sa principale pierre de construction est une calcarénite beige-jaunâtre, caractérisée par son hétérogénéité. Suite à des facteurs d’altération, certaines pierres sont dégradées et doivent être remplacées. Dans ce cadre, une étude a été menée pour établir des corrélations entre des propriétés de pierres calcarénite, nécessitant un prélèvement et des essais au laboratoire avec d’autres propriétés mesurables in situ par deux dispositifs non destructifs: le duromètre Piccolo et le tube de Karsten. Après un échantillonnage et un prélèvement de la carrière d’origine, des essais ont été effectués sur des échantillons de calcarénite au laboratoire : porosité, absorptions d’eau par immersion et par capillarité, dureté et absorption par tube de Karsten. D’après les résultats, l’essai de tube de Karsten donne une bonne estimation de l'absorption d'eau par immersion et par capillarité. De plus, cette étude a montré que la dureté est linéairement corrélée avec la porosité. Par conséquent, ces essais non destructifs pourraient être utilisés pour la sélection des pierres du remplacement adéquates au niveau de la carrière. Leur application sur le site Volubilis permettrait d’identifier leur état d’altération
description: Academic Journal of Civil Engineering, Vol 35 No 1 (2017): Special Issue - RUGC 2017 Nantes
Schmankerl Time Machine: Rechnerisch-explorative Zugänge zur Gastronomie in München
Creators: name: Schneider, Stefanie
name: Schulz, Julian
Publisher: name: Zenodo
Year: 2020
Subjects: Digital Humanities
DHd 2020

description: Die Web-Applikation „Schmankerl Time Machine“ wurde im Rahmen des Hackathons für offene Kulturdaten, „Coding da Vinci Süd 2019“, entwickelt und in der Kategorie „Most Technical“ prämiert. Sie basiert auf 375 Speisekarten von Münchner Restaurants aus den Jahren 1855 bis 2008, die die Monacensia der Stadtbibliothek München für den Hackathon in digitaler Form zur Verfügung gestellt hatte. Das Poster präsentiert die Idee hinter der Applikation, ihre technische Umsetzung – u. a. mit Transkribus, der Open-Source-Umgebung R und den R-Paketen Tidyverse und Shiny – sowie ihre Funktionalität. Folgende Frage steht dabei im Vordergrund: Wie kann die enorme Vielfalt der Karten auch von einer technisch wenig versierten Zielgruppe auf möglichst unterschiedliche Art und Weise exploriert werden? Gleichermaßen vorgestellt wird ein umfassendes Nachhaltigkeitskonzept gemäß den FAIR-Prinzipien.
description: {"references": ["Schulz, Julian; Schneider, Stefanie; Cakir, Osman; Kohl, Linus; Rei\u00dfer, Alexandra (2020): \"Schmankerl Time Machine. Rechnerisch-explorative Zug\u00e4nge zur Gastronomie in M\u00fcnchen\". In: DHd 2020. Spielr\u00e4ume: Digital Humanities zwischen Modellierung und Interpretation. Konferenzabstracts, S. 356\u2013358, DOI: https://doi.org/10.5281/zenodo.3666690."]}
Additional file 4: of Estimating the total prevalence and incidence of end-stage kidney disease among Aboriginal and non-Aboriginal populations in the Northern Territory of Australia, using multiple data sources
Creators: name: Li, Lin
name: Guthridge, Steven
name: Li, Shu
name: Zhao, Yuejen
name: Lawton, Paul
name: Cass, Alan
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Marine Biology

description: Number of prevalent ESKD cases in 4 data sources, Aboriginal population, Northern Territory 2013. (DOCX 18Â kb)
Linac-based radiotherapy for epicondylitis humeri
Creators: name: Navaser, Mahmoud
name: Ghaffari, Hamed
name: Mashoufi, Mehrnaz
name: Refahi, Soheila
Publisher: name: IfADo - Leibniz Research Centre for Working Environment and Human Factors, Dortmund
Year: 2020
Subjects: epicondylitis humeri
radiotherapy
tennis elbow
golfer's elbow

description: EXCLI Journal; 19:Doc296; ISSN 1611-2156
description: Radiotherapy is considered as one of the most effective treatment options for epicondylitis humeri. In the past, orthovoltage machines were used to treat humeral epicondylitis. Within the past few years, owing to technological improvement, an increasing shift to linac-based radiotherapy for humeral epicondylitis has taken place. This letter highlights the role of linac-based radiotherapy for epicondylitis humeri, and also discusses considerations and perspectives.
Additional file 4 of Community violence and internalizing mental health symptoms in adolescents: A systematic review.
Creators: name: Miliauskas, Claudia Reis
name: Faus, Daniela Porto
name: da Cruz, Valéria Lima
name: do Nascimento Vallaperde, João Gabriel Rega
name: Junger, Washington
name: Lopes, Claudia Souza
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 4.
Analysis and Modeling of the Quasi-Z-Source-Inverter
Creators: name: Liske, A.
name: Clos, G.
name: Braun, M.
Publisher: name: Karlsruhe
Year: 2011

description: This paper presents a dynamic average model of the Quasi-Z-Source Inverter (QZSI), based on the short term average values over one PWM-period, and the analysis of the possible switching states that can occur in the QZSI. The model is considerably descriptive since the modeling has been performed by analyzing the physical and functional relations with only little mathematical complexity. Another advantage of the proposed model is that the load current only acts as a disturbance input, and is not directly linked with the model structure itself. This allows a separate examination of either command input or disturbance response and makes the model independent of the given load. The model has been tested successfully in conjunction with an adequate cascade control loop design and a QZSI-prototype in hardware.
Additional file 5: of Estimating the total prevalence and incidence of end-stage kidney disease among Aboriginal and non-Aboriginal populations in the Northern Territory of Australia, using multiple data sources
Creators: name: Li, Lin
name: Guthridge, Steven
name: Li, Shu
name: Zhao, Yuejen
name: Lawton, Paul
name: Cass, Alan
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Marine Biology

description: Number of prevalent ESKD cases in 3 data sources, non-Aboriginal population, Northern Territory 2013. (DOCX 16Â kb)
Etude de la stabilisation du chrome hexavalent dans les matrices cimentaires de bétons de démolition anciens
Creators: name: Ben Maaouia, Oumeima
name: Hamzaoui, Rabah
name: Bennabi, Abdelkrim
name: Colin, Johan
name: Colina, Horacio
Publisher: name: Academic Journal of Civil Engineering
Year: 2020

description: Les bétons de déconstruction dédiés au recyclage, qui peuvent avoir 60 ou 45 ans d’âge sont étudiés de plus près car, malgré l’intérêt économique et environnemental qu’ils représentent, ils peuvent contenir des teneurs en métaux lourds importantes. Le chrome est un élément toxique quand il est sous la forme hexavalente, forme stable dans les milieux alcalins, c'est-à-dire dans les matrices cimentaires pour les bétons à recycler. Dans le cadre de cette étude, qui rentre dans les thématiques de la constructibilité, on s’intéresse à la présence du chrome dans les matrices cimentaires, et la caractérisation environnementale de ces matériaux sous forme granulaire. Cette caractérisation se fait en réalisant des essais de lixiviation de matériaux granulaires utilisant la norme NEN 7347 :2006. Il a été démontré que ces matériaux ne représentent pas de danger quant à leurs futures utilisations malgré la présence du chrome sous ses deux formes stables : la trivalente et l’hexavalente, contenues dans la matrice cimentaire, plus précisément dansl'ettringite
description: Academic Journal of Civil Engineering, Vol 35 No 1 (2017): Special Issue - RUGC 2017 Nantes
Additional file 1: of The plant alkaloid tetrandrine inhibits metastasis via autophagy-dependent Wnt/Î˛-catenin and metastatic tumor antigen 1 signaling in human liver cancer cells
Creators: name: Zhang, Zhenxing
name: Liu, Ting
name: Yu, Man
name: Li, Kangdi
name: Li, Wenhua
Publisher: name: figshare
Year: 2018
Subjects: Biochemistry
Cell Biology
Molecular Biology
Biotechnology
Chemical Sciences not elsewhere classified
Developmental Biology
Cancer

description: Supplementary figures and figure legends. (DOCX 3775Â kb)
Deterministic and stochastic effects underlying marine benthic communities
Creators: name: Chang, Chun-Yi
Publisher: name: Monash University
Year: 2017
Subjects: Uncategorized

description: The role of colonization history and subsequent biotic interactions in determining the species composition in communities has long been the subject of debate in ecology. While one narrative has emphasized deterministic assembly rules, another has emphasized historical contingency. One problem lies in approach: community studies are typically either manipulative but somewhat unnatural, or observational but lacking manipulation. Furthermore, while most ecologists now recognize that both historical and biotic factors shape communities, too few studies have moved beyond qualitative descriptions of their roles. Here we use a manipulative approach that leverages natural variation to provide quantitative estimates of the relative contributions of colonization history and the subsequent biotic interactions. 384 communities were developed on artificial substrata in a homogeneous environment before undergoing reciprocal transplantation. We then compare community structure before and after transplantation as proxies for colonization history and biotic interactions. We found that the importance of history and the ensuing biotic environment differed at different times in community development. Early transplantations resulted in the local environment modifying community history faster compared to postponed transplantations. With a four-week difference in age, colonization history explained 20% more of the variation in older communities than in younger communities. Biotic interactions were able to modify colonization history at the age of 16 weeks, but older communities showed more resistance to the changing biotic environment. Our method provides a manipulative and quantitative approach to understanding the relative contributions of colonization history and biotic interactions to assembly in natural systems.
Additional file 6: of Estimating the total prevalence and incidence of end-stage kidney disease among Aboriginal and non-Aboriginal populations in the Northern Territory of Australia, using multiple data sources
Creators: name: Li, Lin
name: Guthridge, Steven
name: Li, Shu
name: Zhao, Yuejen
name: Lawton, Paul
name: Cass, Alan
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Science Policy

description: Sensitivity analysis for estimates of incidence and prevalence with varied eGFR cutpoints in Primary Care Information System data, by sex, and age group, Aboriginal population, Northern Territory 2013. (DOCX 20 kb)
Central immunological position of the human histo (blood) group O(H).
Creators: name: Arend, Peter
Publisher: name: figshare
Year: 2017
Subjects: Cancer

description:
Prokaryotic "blood group A/B-like" antigenic structures apparently induce basically cross-reactive anti-A/B immunoglobulins, which due to clonal selection neither arise in blood group A nor in B individuals but occur exclusively in blood group O. While bacterial endotoxins non-specifically stimulate the formation of all immunoglobulins, most likely involving the anti-A/B isoagglutinins, a definite, adaptive immunological induction of these agglutinins appears to be restricted to blood group O(H) individuals. In the non-O blood groups, anti-A/B reactivity is exerted by a primarily blood group-independent, polyreactive and thymus-independent non-immune IgM molecule that has undergone the phenotype-specific, glycosidic accommodation of plasma proteins, which reduces or excludes anti-self reactivity, however, necessarily involves impairment of immunity. While blood group A phenotype development thus is associated with impairment of both adaptive and innate immunity, it promotes susceptibility to malaria infection via these intrinsic enzyme functions, initiating a self-destructive glycosidic, phenotypic accommodation of a "wrong eukaryote". In fact, blood group A phenotype-specific GalNAc transferase(s) and serine/threonine kinases, which are imported from Plasmodium falciparum into the red cell membrane, might provide the metabolic condition for malaria rosette formation, assumingly based on heterologous O-glycosylation of serine/threonine residues. Thus, lack of blood group A/B-specific phenotype glycosylations might explain the superior adaptive and innate immunity of the human blood group O(H) and its obvious protection from severe malaria infection, which currently is discussed to contribute to the global distribution of ABO blood groups in the human population.
Caractérisation d’un béton allégé à base de sédiments marins
Creators: name: Zambon, A.
name: Saiyouri, N.
name: Sbartai, M.
name: Duplaine, H.
Publisher: name: Academic Journal of Civil Engineering
Year: 2020

description: Cette étude présente le développement d’un béton innovant qui réutilise les sédiments marins en tant que matière première et en remplacement des granulats traditionnellement utilisés. Il est fabriqué à partir d’une mousse pour lui conférer une faible densité. Le béton développé dans cette étude est fabriqué à partir d’un sol artificiel pour palier au problème de variabilité de ce dernier. L’objectif est de mettre en place une méthode de formulation, un procédé de fabrication et une base de données des caractéristiques de ce matériau. La méthode de formulation est basée sur un paramètre relié à la limite de liquidité des sédiments marins. Les différentes formulations ont été caractérisées mécaniquement en compression à 28jours. En fin le retrait de dessiccation du matériau a été évalué.
description: Academic Journal of Civil Engineering, Vol 35 No 1 (2017): Special Issue - RUGC 2017 Nantes
Additional file 1 of Policy models for preventative interventions in cardiometabolic diseases: a systematic review
Creators: name: Putri, Septiara
name: Ciminata, Giorgio
name: Lewsey, Jim
name: Kamaruzaman, Hanin Farhana Binti
name: Duan, Yuejiao
name: Geue, Claudia
Publisher: name: figshare
Year: 2025
Subjects: Medicine
Biological Sciences not elsewhere classified
Information Systems not elsewhere classified
Science Policy

description: Supplementary Material 1.
Additional file 1 of Personality disorders (PD) and interpersonal violence (IV) during COVID-19 pandemic: a systematic review
Creators: name: Di Stefano, Ramona
name: Di Pietro, Angelica
name: Talevi, Dalila
name: Rossi, Alessandro
name: Socci, Valentina
name: Pacitti, Francesca
name: Rossi, Rodolfo
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1: S1. Search Line Syntax.
Additional file 1: of Toward Exploring the Structure of Monolayer to Few-layer TaS2 by Efficient Ultrasound-free Exfoliation
Creators: name: Hu, Yiwei
name: Hao, Qiaoyan
name: Zhu, Baichuan
name: Li, Biao
name: Gao, Zhan
name: Wang, Yan
name: Tang, Kaibin
Publisher: name: figshare
Year: 2018
Subjects: Biophysics
Biochemistry
Space Science
Physical Sciences not elsewhere classified
Molecular Biology
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Developmental Biology

description: Supporting information. (DOCX 1440Â kb)
Additional file 2 of Policy models for preventative interventions in cardiometabolic diseases: a systematic review
Creators: name: Putri, Septiara
name: Ciminata, Giorgio
name: Lewsey, Jim
name: Kamaruzaman, Hanin Farhana Binti
name: Duan, Yuejiao
name: Geue, Claudia
Publisher: name: figshare
Year: 2025
Subjects: Medicine
Biological Sciences not elsewhere classified
Information Systems not elsewhere classified
Science Policy

description: Supplementary Material 2.
Bayesian methods for identifying non-protein coding genomic regions contributing to diseases
Creators: name: Algama Appuhamilage Dona, Manjula Dilhani
Publisher: name: Monash University
Year: 2017
Subjects: Uncategorized

description: Identifying and discerning the function of non-coding RNAs (ncRNAs) is an important goal of genetic research. Much evidence suggests that ncRNAs play an important role in the aetiology of many complex genetic diseases. Therefore the task of developing methods to identify these elements in genomes has become increasingly urgent. In this research my focus was to use a Bayesian approach to identify putative functional non-coding genomic sequences contributing to various diseases. The analysis was mainly carried out using a Bayesian segmentation model, implemented in the software package changept, designed to segment discrete genomic data. In the first phase of the research, I developed methods to expand the capabilities of changept. One simple but powerful innovation was to develop several ways of encoding an alignment of sequences using a D-character representation (D is a positive integer). This enables sequence alignments to be segmented based on multiple data types: specifically conservation, GC content and transition/transversion ratio and significantly generalizes the capacity of changept, which previously could only segment on the basis of one of these characteristics at a time. Incorporating multiple data types greatly helped to clearly identify complex segmentation patterns and functional signatures among species, especially between closely related species. A second methodological innovation was a new model selection procedure to decide the optimal model for the data. A third, and most important, methodological innovation was to build a process for systematically discovering genome- wide putative ncRNAs, including data selection, cleaning, encoding, analysis and post-processing. To validate these findings, both experimental methods and currently available bioinfomatics resources were used. In the second phase of the research, my focus turned to application of changept, and the new methods developed, to identify genome-wide putative non-coding elements that may be associated with diseases. I was able to discover more than a thousand highly conserved non-coding sequences in human, mouse and zebrafish genomes. A complementary analysis focused on a set of genes involved in muscle development. Some of these elements identified may contribute to muscle diseases. Discovery of putative small ncRNAs in the bacterium Wolbachia pipientis is another successful application of the new methods; this work was undertaken as part of the eradicate dengue project. Application to malaria genomes revealed genetic mechanisms important in infecting multiple hosts. I also identified putative regulatory sequences in 3' UTRs in 3 closely related Drosophila species. Although this work focussed on Drosophila rather than human diseases, mutations in 3' UTRs have been shown to play a crucial role in human health and diseases.
Additional file 2 of Personality disorders (PD) and interpersonal violence (IV) during COVID-19 pandemic: a systematic review
Creators: name: Di Stefano, Ramona
name: Di Pietro, Angelica
name: Talevi, Dalila
name: Rossi, Alessandro
name: Socci, Valentina
name: Pacitti, Francesca
name: Rossi, Rodolfo
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 2: S2. Included studies and main extracted data.
Additional file 1 of Demand for family planning satisfied by modern methods in Ghana: trends and inequalities (2013–2022)
Creators: name: Obeng, Akua Amponsaa
name: Blumenberg, Cauane
name: Afagbedzi, Seth Kwaku
name: Wado, Yohannes Dibaba
name: Nilsen, Kristen
Publisher: name: figshare
Year: 2025
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Supplementary Material 1.
Development of a process model for the prediction of absorbent degradation during CO₂ capture
Creators: name: Dickinson, Jillian
Publisher: name: Monash University
Year: 2017
Subjects: Uncategorized

description: Fossil fuels are used widely for energy production and are likely to continue to play a major role world wide for many years to come. Much work has been done on the technology for capturing CO₂ from gaseous industrial e ffluent. For large-scale applications like coal or natural gas-fired power plants, using amine solvents to capture post-combustion CO₂ is the most mature CO₂ capture technology. This technique can be used to retro fit existing plants by treating the flue gas after combustion. This thesis contains a dynamic mathematical model for the absorber column that can be used to include more detailed reaction chemistry for the absorption of CO₂ into an amine in the presence of O₂ as it becomes available. The dynamic model is constructed from first principles and, while it is built using MEA as the absorbent to remove CO₂, it can be adjusted to cater for the removal of different industrial gases with various absorbents. The model is solved using a commercial solver, MATLAB Ode15s when reduced to a system of ODE's by finite difference in the spatial dimension. The flux of MEA, CO₂, O₂ and H₂O across the phase interface in either direction has been included and more components can be added as required. The loss of MEA through oxidative degradation has been quantified which is currently not available using commercial packages. Reaction rate kinetics have been employed to predict the accumulation of oxidation products which is limited by the incomplete knowledge of the dominant reactions between O₂ and MEA. When research has produced more detailed information about the products formed during this oxidation, it can be inserted easily into the model. Validation has been performed using data from the CSIRO PCC pilot plant at AGL Loy Yang. A limited parametric study of the impact of operating conditions on oxidation was performed.
Additional file 1: of The polycomb group protein EZH2 induces epithelialâ mesenchymal transition and pluripotent phenotype of gastric cancer cells by binding to PTEN promoter
Creators: name: Gan, Lu
name: Xu, Midie
name: Hua, Ruixi
name: Tan, Cong
name: Zhang, Jieyun
name: Gong, Yiwei
name: Wu, Zhenhua
name: Weng, Weiwei
name: Sheng, Weiqi
name: Guo, Weijian
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Materials and Methods. Table S1. Relationship between EZH2 expression and clinicopathologic parameters of gastric cancer patients. Table S2. Univariate and multivariate analysis of clinicopathological factors for disease-free survival in gastric cancer (qRT-PCR cohort). Table S3. Univariate and multivariate analysis of clinicopathological factors for overall survival in gastric cancer (qRT-PCR cohort). Table S4. Univariate and multivariate analysis of clinicopathological factors for overall survival in gastric cancer (IHC cohort). Table S5. Correlation analysis of expression of stem cell related factors with EZH2. Table S6. Primers and siRNA sequences used in this study. (DOCX 67Â kb)
MOESM1 of Identification and characterization of areas of high and low risk for asymptomatic malaria infections at sub-village level in Ratanakiri, Cambodia
Creators: name: Durnez, Lies
name: Pareyn, Myrthe
name: Mean, Vanna
name: Kim, Saorin
name: Khim, Nimol
name: Menard, Didier
name: Coosemans, Marc
name: Sochantha, Tho
name: Sluydts, Vincent
Publisher: name: figshare
Year: 2018
Subjects: subject: Physical Sciences not elsewhere classified
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Ecology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology
subject: Computational Biology

description: Additional file 1: Table S1. Survey questionnaire for collection of malariometric and risk factor data. Table S2. Summary characteristics from the population census of the three villages divided into the sampled and not sampled individuals for plasmodium prevalence identification. Table S3. Single and mixed individual plasmodium infections as detected by PCR for the three village. Pf: Plasmodium falciparum, Pv: Plasmodium vivax, Pm: Plasmodium malariae. PfPv, PfPm, PvPm and PfPvPm stands for the mixed infections occurring in one individual for multiple plasmodium species. Numbers are counts of infected individuals. Table S4. Results of univariate analysis comparing risk factors for infection with Plasmodium spp. (all species combined), P. falciparum, P. vivax and P. malariae. Odds ratio and upper and lower 95% confidence limits were calculated with respect to the reference category, which is the first reported subgroup.
Additional file 1: of The genome of a prasinoviruses-related freshwater virus reveals unusual diversity of phycodnaviruses
Creators: name: Chen, Hao
name: Zhang, Weijia
name: Li, Xiefei
name: Pan, Yingjie
name: Yan, Shuling
name: Wang, Yongjie
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Marine Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Supplementary data. It contains all supplementary figures and tables. (DOCX 447Â kb)
Caractérisation du potentiel structurant de vases naturelles via une approche rhéométrique de cisaillement simple Application au cas de vases de l’estuaire de la Rance
Creators: name: Serhal, S.
name: Rangeard, D.
name: Castex, A.
name: Pierre, A.
name: Melinge, Y.
name: Chehade, F.
Publisher: name: Academic Journal of Civil Engineering
Year: 2020

description: Dans cet article, une partie d’une étude dédiée au comportement rhéologique de mélanges liquide/solides est proposée. La phase solide est composée de sédiments prélevés dans l’estuaire de la Rance (35). La phase liquide est de l’eau du robinet. Un protocole de caractérisation est mis en oeuvre pour éviter le vieillissement au cours de la caractérisation. Les effets de l’âge des suspensions, la composition granulométrique et le taux de cisaillement sont recherchés à fraction volumique solide fixée via une caractérisation du comportement visco-plastique. Enfin, l’influence de la matière organique et de sels est démontrée.
description: Academic Journal of Civil Engineering, Vol 35 No 1 (2017): Special Issue - RUGC 2017 Nantes
Cognitive correlates of social pain
Creators: name: Cristofori, Irene
name: Beffara, Bertrand
Publisher: name: OSF Registries
Year: 2024
Subjects: subject: Psychiatry and Psychology
subject: Medicine and Health Sciences
subject: Life Sciences
subject: Biology
subject: Neuroscience and Neurobiology
subject: Social and Behavioral Sciences

description: Attentional signals are factors involved in the control of attention (e.g. physical salience, rewarding stimulus, etc). Here we challenge the view according to which "social attentional signals" automatically overcome the presence of any other attentional signal in a visual scene in the absence of strong gating effect of goal-related signals. Indeed, in the literature on social pain there is indirect evidence that internal states associated with social exclusion contexts (i.e. the feeling of social exclusion) can mitigate the effect of social attentional signals on attentional control.
Additional file 1: of Plasma virome of cattle from forest region revealed diverse small circular ssDNA viral genomes
Creators: name: Wang, Hao
name: Li, Shouxin
name: Mahmood, Asif
name: Yang, Shixing
name: Wang, Xiaochun
name: Shen, Quan
name: Shan, Tongling
name: Deng, Xutao
name: Li, Jingjiao
name: Hua, Xiuguo
name: Cui, Li
name: Delwart, Eric
name: Zhang, Wen
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Hematology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Virology

description: Primers used in the specific screening PCR and inverse PCR. (PDF 54 kb)
Influence of Stirring Time on the Electrochemical Synthesis of Silver Nanoparticles: Size and Stability Analysis
Creators: name: Mohammed Hashim, Albashir
name: Ali K., Mohammed
Publisher: name: Zenodo
Year: 2024

description: This study explores the impact of stirring time on the size distribution and stability of silver nanoparticles (Ag-NPs) synthesized through an electrochemical method. High-purity silver rods and distilled water were used in an electrochemical cell, with varying stirring times (30 minutes and 1 hour) to observe differences in nanoparticle formation. UV-Visible spectrophotometry revealed characteristic plasmon resonance peaks at 395 nm for 30-minute stirring and 400 nm for 1-hour stirring, indicating differences in size distribution. Scanning Electron Microscopy (SEM) analyses showed that nanoparticles with a 30-minute stirring time hadsizes ranging from 40 to 60 nm, while those with a 1-hour stirring time ranged from 30 to 50 nm. These findings underscore the importance of stirring time in achieving desired nanoparticle characteristics, which is crucial for applications in medical devices, coatings, and antimicrobial treatments
Additional file 2: of Plasma virome of cattle from forest region revealed diverse small circular ssDNA viral genomes
Creators: name: Wang, Hao
name: Li, Shouxin
name: Mahmood, Asif
name: Yang, Shixing
name: Wang, Xiaochun
name: Shen, Quan
name: Shan, Tongling
name: Deng, Xutao
name: Li, Jingjiao
name: Hua, Xiuguo
name: Cui, Li
name: Delwart, Eric
name: Zhang, Wen
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Virology

description: The sequence reads of papillomavirus and picobirnavirus in library cattle02. (PDF 33 kb)
title: Correspondance de Jacques Leibowitch avec Philippe Poussier, et al.
Creators: name: Poussier, Philippe
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020

description: Source: http://www.calames.abes.fr/pub/ms/Calames-2019311113191752
Additional file 2 of Demand for family planning satisfied by modern methods in Ghana: trends and inequalities (2013–2022)
Creators: name: Obeng, Akua Amponsaa
name: Blumenberg, Cauane
name: Afagbedzi, Seth Kwaku
name: Wado, Yohannes Dibaba
name: Nilsen, Kristen
Publisher: name: figshare
Year: 2025
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Supplementary Material 2.
Additional file 1 of Predictive biomarkers for the efficacy of nivolumab as ≥ 3rd-line therapy in patients with advanced gastric cancer: a subset analysis of ATTRACTION-2 phase III trial
Creators: name: Kim, Jwa Hoon
name: Ryu, Min-Hee
name: Park, Young Soo
name: Ma, Jungeun
name: Lee, Sun Young
name: Kim, Deokhoon
name: Kang, Yoon-Koo
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy

description: Additional file 1: Table S1. Clinical outcomes of AMC and overall patients in ATTRACTION-2 study. Table S2. Univariate and multivariate analyses for PFS and OS in the 45 AMC patients. Table S3. Treatment-related adverse events with nivolumab. Figure S1. PFS (a) and OS (b) in nivolumab vs. placebo group according to PD-L1 TPS. Figure S2. PFS of five patients with EBV-positive-advanced gastric cancer.
LCA Modeling of Cement Concrete Waste Management
Creators: name: Mousavi, Marjan
name: Ventura, Anne
name: Antheaume, Nicolas
Publisher: name: Academic Journal of Civil Engineering
Year: 2020

description: Valorization of construction and demolition wastes (CDW) has become a fundamental issue in Europe, due to the huge amounts generated every year. Choosing an appropriate destination among several destinations for such wastes requires a global environmental assessment that can be provided by Life Cycle Assessment (LCA). Recycling is one of the waste handling practices whose environmental performances can be assessed by several methods in LCA. Among those methods, system expansion and cut-off methods are currently the most used methods, which were investigated in this paper to handle recycling of cement concrete demolition waste (CCDW) in LCA. Therefore, a case study was defined as waste management of a specific amount of CCDW for landfilling or for producing aggregates for road pavement construction. Results of the analysis showed that methods provide different results for the same problem. Overcoming this methodological problem of identifying actual environmental consequences requires developing a waste management model by taking into account the economic demands for the main co-product of the quarry process in the markets
description: Academic Journal of Civil Engineering, Vol 35 No 1 (2017): Special Issue - RUGC 2017 Nantes
Additional file 1: Figure S1. of Influence of drought stress on afalfa yields and nutritional composition
Creators: name: Liu, Yinghao
name: Wu, Qian
name: Ge, Gentu
name: Han, Guodong
name: Jia, Yushan
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Air temperature and rainfall in the 2 years during the experiments were conducted. (DOCX 104Â kb)
Three essays on social norms
Creators: name: Vecci, Joseph
Publisher: name: Monash University
Year: 2017
Subjects: Uncategorized

description: This thesis comprises three papers that examine social norms and their effect on behaviour. The papers use surveys and experiments to examine this topic. The first paper uses survey data to show that a societies surrounding ecology is an important determinant of the prevalence of female land inheritance. The second paper demonstrates through a field experiment in India that males act out against female leaders, especially when female leaders are in place as a result of a quota. The final paper demonstrates through a laboratory experiment that trust in high status leaders is an important factor in the decision to follow them.
Additional file 1: Table S1. of Rare variant association analysis in case-parents studies by allowing for missing parental genotypes
Creators: name: Li, Yumei
name: Xiang, Yang
name: Xu, Chao
name: Shen, Hui
name: Deng, Hongwen
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Chemical Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Plant Biology

description: All the expectations of E(x),E(b),and E(c) when (GF, GM ,GO)â ÎŠI. (PDF 109Â kb)
title: OFROM: interview avec unine15b40m
Creators: name: Delafontaine, François
name: Rothenbühler, Julie
Publisher: name: COCOON - https://cocoon.huma-num.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2023
Subjects: subject: Français
subject: fra

description: Conforms to: Praat textgrid
description: Conforms to: doi:10.34847/cocoon.69c4fa74-f324-3ddb-9f1a-580867fd5826
description: Conforms to: doi:10.34847/cocoon.69c4fa74-f324-3ddb-9f1a-580867fd5826
description: Source: https://nakala.fr/10.34847/nkl.13eeunqm.v2#f6f5187f2fad18d5d3e1642a1f512d399b312125
Additional file 1 of Assessing the pharmaceutical care provision to suspected COVID-19 patients in community pharmacies: a simulated patient study
Creators: name: Karout, Samar
name: Khojah, Hani M. J.
name: Itani, Rania
name: Jaffal, Fatima
name: El-Lakany, Abdalla
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 1.
Aide à la conception de bâtiments maximisant la qualité de l'air intérieur et les performances environnementales
Creators: name: Micolier, Alice
name: Taillandier, Franck
name: Sonnemann, Guido
name: Ndiaye, Amadou
name: Bos, Frédéric
name: Perry, Nicolas
Publisher: name: Academic Journal of Civil Engineering
Year: 2020

description: La pollution dans les bâtiments provenant de sources internes est devenue un problème majeur de santé publique dans la mesure où nous passons en moyenne 80% de notre temps dans des espaces fermés et que c’est l’ensemble de la population qui est concernée. Apprendre à concevoir des bâtiments avec une bonne qualité de l'air intérieur est l'un des défis de demain. Dans ce contexte, cette étude a pour objectif de développer un outil d'aide à la décision qui puisse être utilisé dans la phase de conception d'un bâtiment résidentiel afin de guider les choix de la maitrise d’oeuvre pour assurer une meilleure qualité de l'air intérieur. Cela ne doit cependant pas se faire au détriment de la performance énergétique et environnementale du bâtiment. La méthodologie développée est basée sur l’intégration de différentes méthodes de modélisation (analyse de cycle de vie, modèle agent, simulation d’air intérieur, simulation thermique) afin de répondre à ces enjeux
description: Academic Journal of Civil Engineering, Vol 35 No 1 (2017): Special Issue - RUGC 2017 Nantes
Additional file 2: Table S2. of Rare variant association analysis in case-parents studies by allowing for missing parental genotypes
Creators: name: Li, Yumei
name: Xiang, Yang
name: Xu, Chao
name: Shen, Hui
name: Deng, Hongwen
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Chemical Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Plant Biology

description: All the expectations of E(x),E(b),and E(c) when (GF, GM ,GO)â ÎŠII. (PDF 88Â kb)