cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 14 of Immuno-genomic classification of colorectal cancer organoids reveals cancer cells with intrinsic immunogenic properties associated with patient survival
Creators: name: Cho, Eun Jeong
name: Kim, Minsuh
name: Jo, Daum
name: Kim, Jihye
name: Oh, Ji-Hye
name: Chung, Hee Chul
name: Lee, Sun-hye
name: Kim, Deokhoon
name: Chun, Sung-Min
name: Kim, Jihun
name: Lee, Hyeonjin
name: Kim, Tae Won
name: Yu, Chang Sik
name: Sung, Chang Ohk
name: Jang, Se Jin
Publisher: name: figshare
Year: 2021
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 14 Supplementary Fig. 13. (A) Frequency of TP53 gain-of-function (GOF) mutation based on the tumor immune microenvironment (TIM) class, showing a high frequency of TP53 GOF mutations in the Desert group (p = 0.033, Fisher’s exact test). (B) Association between TP53 GOF mutations and decreased CD8+ T cell (10,000 random permutation test and Spearman’s correlation test). (C) Tendency for the exclusive occurrence of TP53 and KRAS mutation. (D) Enriched unfolded protein response pathway (GSVA score) in the immune-exhausted group (Wilcoxon rank-sum test).
Additional file 1 of Amaryllidaceae plants: a potential natural resource for the treatment of Chagas disease
Creators: name: Martínez-Peinado, Nieves
name: Cortes-Serra, Nuria
name: Tallini, Luciana R.
name: Pinazo, Maria-Jesus
name: Gascon, Joaquim
name: Bastida, Jaume
name: Alonso-Padilla, Julio
Publisher: name: figshare
Year: 2021
Subjects: subject: Organic Chemistry
subject: FOS: Chemical sciences

description: Additional file 1: Table S1. Active extracts IC50, TC50 and SI parameters are shown for each extract. IC50 and TC50 R2 statistical indicator is also included in the table. Those extracts that presented specific activity (SI > 20) are highlighted in grey.
Additional file 1 of PlasForest: a homology-based random forest classifier for plasmid detection in genomic datasets
Creators: name: Pradier, Léa
name: Tissot, Tazzio
name: Fiston-Lavier, Anna-Sophie
name: Bedhomme, Stéphanie
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics

description: Additional file 1. Figure S1: Compared running time and memory use for PlasForest and PlasClass.
On Lebesgue Property for Fuzzy Metric Spaces
Creators: name: Adhya, Sugata
name: Ray, A. Deb
Publisher: name: arXiv
Year: 2018
Subjects: subject: General Topology (math.GN)
subject: FOS: Mathematics
subject: 54A40, 54E35, 54E40

description: We provide several characterizations of the Lebesgue property for fuzzy metric spaces. It is known that a fuzzy metric space is Lebesgue if and only if every real-valued continuous function is uniformly continuous. Here we show that it suffices to examine uniform continuity of bounded real-valued continuous functions for characterizing Lebesgue property in fuzzy setting.
description: 9 pages
The Negative-Curvature Re-stellation –  The Hyperbolic Origins Of Matter
Creators: name: Kirjoenen, Miikka
name: Kirjonen, Miikka
Publisher: name: Zenodo
Year: 2025
Subjects: hyperbolic
isometry
negatively curved restellation
hyperbolic chirality
negative-curvature pocket
Hopf
restellation
chiral pockets

description: Matter emerges as a negatively curved restellation of an otherwise flat superfluid. Each restellation traps an integer Hopf charge whose chirality is determined by the underlying hyperbolic tiling parameters. When one drives the system at frequency ratios p ∶ q, pockets of negative curvature nucleate with a characteristic velocity splitting proportional to κ(p − q)/(p q).

The resulting rhombic patterns are freeze-frames of p∶q harmonics, and their handedness is not an ad hoc attribute but the unavoidable orbital angular momentum of a negative-curvature pocket. A simple, universal wave equation endowed with a nonlinear coherence pump captures how these chiral pockets form, persist, and self–amplify, without invoking any external cosmic, neural, or metamaterial context.

In a flat Euclidean plane left and right are interchangeable by a global reflection. In contrast, a hyperbolic slice admits no single isometry that simultaneously flips every face of a regular {p,q} tessellation. Some geodesics reverse under reflection, others do not, so handedness becomes baked into the metric.

As soon as a physical field condenses on such a negatively curved lattice, two inequivalent sectors labeled by σ = ±1 emerge spontaneously and cannot be undone by any smooth deformation. This intrinsic hyperbolic chirality underlies the behavior of “particles” in the Resonance-Synchronization Model (RSM), which treats matter as local restellations of a universal superfluid background.
Impurity-Induced Quasiparticle Transport and Universal Limit Wiedemann-Franz Violation in d-Wave Superconductors
Creators: name: Durst, A. C.
name: Lee, P. A.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: Due to the node structure of the gap in a d-wave superconductor, the presence of impurities generates a finite density of quasiparticle excitations at zero temperature. Since these impurity-induced quasiparticles are both generated and scattered by impurities, prior calculations indicate a universal limit (Ω-> 0, T -> 0) where the transport coefficients obtain scattering-independent values, depending only on the velocity anisotropy v_f/v_2. We improve upon prior results, including the contributions of vertex corrections and Fermi liquid corrections in our calculations of universal limit electrical, thermal, and spin conductivity. We find that while vertex corrections modify electrical conductivity and Fermi liquid corrections renormalize both electrical and spin conductivity, only thermal conductivity maintains its universal value, independent of impurity scattering or Fermi liquid interactions. Hence, low temperature thermal conductivity measurements provide the most direct means of obtaining the velocity anisotropy for high T_c cuprate superconductors.
description: 22 pages, 6 figures; revised version to be published in Phys Rev B
Additional file 4 of The characterization of key physiological traits of medicinal cannabis (Cannabis sativa L.) as a tool for precision breeding
Creators: name: Naim-Feil, Erez
name: Pembleton, Luke W.
name: Spooner, Laura E.
name: Malthouse, Alix L.
name: Miner, Amy
name: Quinn, Melinda
name: Polotnianka, Renata M.
name: Baillie, Rebecca C.
name: Spangenberg, German C.
name: Cogan, Noel O. I.
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 4: The determination of replicate quantities.
Consumer Theory: A Probabilistic Approach Yielding Determinate Expected Signs for the Cross Effects
Creators: name: Vandermeulen, Daniel
name: Vandermeulen, Daniel
Publisher: name: Unknown
Year: 1984
Subjects: Research and Development/Tech Change/Emerging Technologies
Risk and Uncertainty

description: The axioms on preference define the set of all actual or potential consumers or, equivalently, the set of all utility functions representing preferences. A single consumer, a group of consumers, and the consuming sector are treated as samples chosen from either of these sets. A linear consumption technology is introduced, and the cross effects are shown to defend on the interaction of the technology with the properties of preference expressed by the Antonelli matrix. Some weak probabilistic assumptions about the properties of the Antonelli matrix yield expected values and variances for all cross effects. When the technology matrix is an identity matrix, as is true for conventional consumer theory, all pairs of market goods are predicted to be weak substitutes for each other, and the expected signs are significant for a sufficiently large sample of consumers. A wide range of statistically significant cross effects is obtained when the technology requires joint use of market goods in consumption activities, but the classification of market goods as complements or substitutes depends almost entirely on the technology.
Haemaphysalis sundrai Sharif 1928
Creators: name: Guglielmone, Alberto A.
name: Nava, Santiago
name: Robbins, Richard G.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Ixodida
Ixodidae
Haemaphysalis
Haemaphysalis sundrai

description: 158. Haemaphysalis sundrai Sharif, 1928.
 Oriental: 1) India, 2) Nepal (south and central) (Hoogstraal & El Kammah 1970, Dhanda & Bhat 1971, Kolonin 2009, Pun et al. 2018).
 Several records of Haemaphysalis sundrai have been published under the name Haemaphysalis himalaya, described by Hoogstraal (1966c), which is a synonym of Haemaphysalis sundrai, as discussed in Guglielmone et al. (2009). Nevertheless, authors such as Ghosh et al. (2007) and Geevarghese & Mishra (2011) have treated both Haemaphysalis sundrai and Haemaphysalis himalaya as valid.
description: Published as part of Guglielmone, Alberto A., Nava, Santiago & Robbins, Richard G., 2023, Geographic distribution of the hard ticks (Acari: Ixodida: Ixodidae) of the world by countries and territories, pp. 1-274 in Zootaxa 5251 (1) on page 100, DOI: 10.11646/zootaxa.5251.1.1, http://zenodo.org/record/7704190
Additional file 1: of Genome expansion of an obligate parthenogenesis-associated Wolbachia poses an exception to the symbiont reduction model
Creators: name: A. Kampfraath
name: L. Klasson
name: S. Anvar
name: R. Vossen
name: D. Roelofs
name: K. Kraaijeveld
name: J. Ellers
Publisher: name: figshare
Year: 2019
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: BUSCO assessment results of 18 Wolbachia genomes included in this paper. Protein sequences of the 18 Wolbachia strains were searched for a set of 148 single copy bacterial genes (Bacteria odb9), defining the complete, fragmented and missing genes. (PDF 291 kb)
The FHD/$\boldsymbol{\varepsilon}$ppsilon Epoch of Reionization Power Spectrum Pipeline
Creators: name: Barry, N.
name: Beardsley, A. P.
name: Byrne, R.
name: Hazelton, B.
name: Morales, M. F.
name: Pober, J. C.
name: Sullivan, I.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Physical sciences

description: Epoch of Reionization data analysis requires unprecedented levels of accuracy in radio interferometer pipelines. We have developed an imaging power spectrum analysis to meet these requirements and generate robust 21 cm EoR measurements. In this work, we build a signal path framework to mathematically describe each step in the analysis, from data reduction in the FHD package to power spectrum generation in the $\varepsilon$ppsilon package. In particular, we focus on the distinguishing characteristics of FHD/$\varepsilon$ppsilon: highly accurate spectral calibration, extensive data verification products, and end-to-end error propagation. We present our key data analysis products in detail to facilitate understanding of the prominent systematics in image-based power spectrum analyses. As a verification to our analysis, we also highlight a full-pipeline analysis simulation to demonstrate signal preservation and lack of signal loss. This careful treatment ensures that the FHD/$\varepsilon$ppsilon power spectrum pipeline can reduce radio interferometric data to produce credible 21 cm EoR measurements.
description: 21 pages, 10 figures, accepted by PASA
title: ADCO, Cartulaire des Dominicains de Dijon (1286), Cart. 221 (H 53), 170 folios, f. 0049
Creators: name: de la Côte d'Or, Archives départementales
name: CG21/F.PETOT/2012
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: cartulaire
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge

description: Cartulaire des Dominicains de Dijon (1286), Archives départementales de la Côte-d'Or, Cart. 221 (H 53), 170 folios. Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire des Dominicains de Dijon (1286), Archives départementales de la Côte-d'Or, Cart. 221 (H 53), 170 folios, f. 0049, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: Dijon
description: Provenance: http://www.wikidata.org/entity/Q7003
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb15250518p
description: Provenance: http://www.idref.fr/02643413X/id
description: Provenance: https://www.geonames.org/6453767
Additional file 2 of RAMS11 promotes CRC through mTOR-dependent inhibition of autophagy, suppression of apoptosis, and promotion of epithelial-mesenchymal transition
Creators: name: Islam Khan, Md Zahirul
name: Law, Helen Ka Wai
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Hematology

description: Additional file 2. Original data of the results
Serum Levels of OPG, RANKL, and RANKL/OPG Ratio in Patients with Ankylosing Spondylitis: A Systematic Review and Meta-analysis
Creators: name: Chen, Mengya
name: Hu, Xingxing
name: Wu, Meng
name: Yang, Jiajia
name: Han, Renfang
name: Ma, Yubo
name: Zhang, Xu
name: Yuan, Yaping
name: Liu, Rui
name: Wang, Mengmeng
name: Jiang, Guangming
name: Deng, Jixiang
name: Xu, Shengqian
name: Xu, Jianhua
name: Shuai, Zongwen
name: Pan, Faming
Publisher: name: Taylor & Francis
Year: 2019
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Science Policy
subject: Hematology

description: Objectives: To investigate the role of osteoprotegerin (OPG), receptor activator of nuclear factor-kB ligand (RANKL), and RANKL/OPG ratio in the pathogenesis of ankylosing spondylitis (AS). Methods: Studies that compared serum levels of OPG, RANKL, and RANKL/OPG ratio between AS patients and healthy controls were gathered. Pooled standardized mean differences (SMDs) with 95% confidence intervals (CIs) were calculated by the random-effects model. Results: Twenty studies containing 1592 AS patients and 1064 healthy controls were included in this meta-analysis. Serum levels of OPG, RANKL, and RANKL/OPG ratio in AS patients were significantly higher than that in normal controls (OPG: SMD = 0.401, 95%CI = 0.026–0.777, p = 0.036; RANKL: SMD = 1.116, 95%CI = 0.510–1.723, p < 0.001; RANKL/OPG ratio: SMD = 0.691, 95%CI = 0.084–1.299, p = 0.026, respectively). Subgroup analysis suggested that Asian AS patients and patients with elevated ESR (ESR >20 mm/h) had higher serum OPG levels compared to normal controls. Asian patients, CRP >10 mg/L, ESR >20 mm/h, duration of disease ≤8 years, and BASDAI score >4 points subgroups showed increased RANKL levels compared to controls. Conclusions: Serum levels of OPG, RANKL, and RANKL/OPG ratio may be used as potential susceptible biomarkers for AS, but they could be influenced by race, inflammatory factors, and disease activity of AS patients.
Haemaphysalis suntzovi Kolonin 1993
Creators: name: Guglielmone, Alberto A.
name: Nava, Santiago
name: Robbins, Richard G.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Ixodida
Ixodidae
Haemaphysalis
Haemaphysalis suntzovi

description: 159. Haemaphysalis suntzovi Kolonin, 1993.    Oriental: 1) Vietnam (Kolonin 1995b, Petney et al. 2019).
description: Published as part of Guglielmone, Alberto A., Nava, Santiago & Robbins, Richard G., 2023, Geographic distribution of the hard ticks (Acari: Ixodida: Ixodidae) of the world by countries and territories, pp. 1-274 in Zootaxa 5251 (1) on page 100, DOI: 10.11646/zootaxa.5251.1.1, http://zenodo.org/record/7704190
Shear-Driven Flow of Athermal, Frictionless, Spherocylinder Suspensions in Two Dimensions: Stress, Jamming, and Contacts
Creators: name: Marschall, Theodore A.
name: Teitel, S.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: We use numerical simulations to study the flow of a bidisperse mixture of athermal, frictionless, soft-core two dimensional spherocylinders driven in uniform steady state shear. Energy dissipation is via a viscous drag with respect to a uniformly sheared host fluid, giving a model for a non-Brownian suspension with a Newtonian rheology. We study pressure $p$ and deviatoric shear stress $σ$ as a function of packing fraction $ϕ$, strain rate $\dotγ$, and a parameter $α$ that measures the asphericity of the particles. We consider the anisotropy of the stress tensor, the macroscopic friction $μ=σ/p$, and the divergence of the transport coefficient $η_p=p/\dotγ$ as $ϕ$ is increased to the jamming $ϕ_J$. From an analysis of Herschel-Bulkley rheology above jamming, we estimate $ϕ_J$ as a function of $α$ and show that the variation of $ϕ_J$ with $α$ is the main cause for differences in rheology as $α$ is varied. However a detailed scaling analysis of the divergence of $η_p$ for our most elongated particles suggests that the jamming transition of spherocylinders may be in a different universality class than that of circular disks. We compute the number of contacts per particle $Z$ in the system and show that at jamming $Z_J$ is a non-monotonic function of $α$ that is always smaller than the isostatic value. We measure the probability distribution of contacts per unit surface length $\mathcal{P}(\vartheta)$ at polar angle $\vartheta$ with respect to the spherocylinder spine, and find that as $α\to 0$ this distribution seems to diverge at $\vartheta=π/2$, giving a finite limiting probability for contacts on the vanishingly small flat sides of the spherocylinder. Finally we consider the variation of the average contact force as a function of location on the particle surface.
description: 25 pages, 28 figures, updated to published version; some figures added, some material rearranged
On the rigidity of back-to-back top quark pairs in e^+e^- annihilation
Creators: name: Groote, S.
name: Körner, J. G.
name: Leyva, J. A.
Publisher: name: arXiv
Year: 1998
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We consider the effect of gluon radiation on the energy of top/antitop quarks and on the anticollinearity of top-antitop quark pairs produced in $e^+e^-$ annihilation. Our results are presented in terms of the $E_q$-dependence of the $t\bar tg$ cross section and the dependence on the cosine of the opening angle $θ_{12}$ between top and antitop for a center of mass energy of $\sqrt{q^2}=500 GeV$. We then go on to determine mean values for the top quark's energy as well as its longitudinal and transverse projections, and for the deviation of $\sinθ_{12}$ and $\cosθ_{12}$ from the anticollinearity limits $\sinθ_{12}=0$ and $\cosθ_{12}=-1$. For a center of mass energy of $500 GeV$ we obtain $=248.22 GeV$, $=247.24 GeV$ and $=4.70 GeV$. Thus, at this energy gluon radiation causes a total average energy loss of 0.71% of the top quark's energy. The average energy loss in the longitudinal direction is 1.06% and the average energy gain in the transverse direction is 1.88%. These percentage figures go up to 3.77%, 5.19% and 6.06%, respectively, at $1000\GeV$. For the mean of the acollinearity angle $\barθ_{12}=180^0-θ_{12}$ we obtain $=1.25^0$ at $500 GeV$, the value of which goes up to $4.62^0$ at $1000 GeV$. From an analysis of the transverse momentum of the top we find that the mean transverse momentum of the top stays close to the mean total momentum of the gluon in the energy range from threshold to $1000 GeV$ showing that the gluon momentum has a large mean transverse component in this energy range.
description: 17 pages, 7 postscript figures, to appear in Nucl. Phys. B
Haemaphysalis tauffliebi Morel 1965
Creators: name: Guglielmone, Alberto A.
name: Nava, Santiago
name: Robbins, Richard G.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Ixodida
Ixodidae
Haemaphysalis
Haemaphysalis tauffliebi

description: 162. Haemaphysalis tauffliebi Morel, 1965b.   Afrotropical: 1) Cameroon, 2) Congo, 3) Ethiopia (Morel 1980).
 Hoogstraal & Wassef (1973) and Kolonin (2009) included South Africa within the range of Haemaphysalis tauffliebi. However, Walker (1991) stated that this tick is not found in South Africa, and specimens alleged to have been collected there are no longer available for study. Horak et al. (2018) recognized this by ignoring Haemaphysalis tauffliebi when analyzing the ticks of South Africa, and we have therefore excluded South Africa from the range of Haemaphysalis tauffliebi.
description: Published as part of Guglielmone, Alberto A., Nava, Santiago & Robbins, Richard G., 2023, Geographic distribution of the hard ticks (Acari: Ixodida: Ixodidae) of the world by countries and territories, pp. 1-274 in Zootaxa 5251 (1) on page 101, DOI: 10.11646/zootaxa.5251.1.1, http://zenodo.org/record/7704190
Can we extract short-distance information from B(K_L -> mu^+ mu^-)?
Creators: name: D'Ambrosio, G.
name: Isidori, G.
name: Portoles, J.
Publisher: name: arXiv
Year: 1997
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: A new analysis of the long-distance two-photon dispersive amplitude of K_L -> mu^+ mu^- is presented. We introduce a phenomenological parameterization of the K_L -> gamma^* gamma^* form factor, constrained at low energies by K_L -> gamma l^+ l^- (l = e,mu) data and at high energies by perturbative QCD. Using this form factor we provide a reliable estimate of magnitude and relative uncertainty of the two-photon dispersive contribution to K_L -> mu^+ mu^-. We finally discuss the implications of this analysis for the extraction of short-distance information from B(K_L -> mu^+ mu^-).
description: 12 pages, LaTeX, 3 figures included as PS files
Hole pairing and phonon dynamics in generalized 2D $t-J-$Holstein models
Creators: name: Sakai, T.
name: Poilblanc, D.
name: Scalapino, D. J.
Publisher: name: arXiv
Year: 1996
Subjects: subject: Condensed Matter (cond-mat)
subject: FOS: Physical sciences

description: The formation of hole pairs in the planar t-J model is studied in the presence of independent {\it dynamic} vibrations of the in-plane oxygen atoms. In-plane (breathing modes) and out-of-plane (buckling modes) displacements are considered. We find strong evidences in favor of a stabilization of the two hole bound pair by out-of-plane vibrations of the in-plane oxygens. On the contrary, the breathing modes weaken the binding energy of the hole pair. These results are discussed in the context of the superconducting cuprates.
description: 4 pages LaTeX and 6 PostScript figures in uuencoded form
Additional file 3 of The characterization of key physiological traits of medicinal cannabis (Cannabis sativa L.) as a tool for precision breeding
Creators: name: Naim-Feil, Erez
name: Pembleton, Luke W.
name: Spooner, Laura E.
name: Malthouse, Alix L.
name: Miner, Amy
name: Quinn, Melinda
name: Polotnianka, Renata M.
name: Baillie, Rebecca C.
name: Spangenberg, German C.
name: Cogan, Noel O. I.
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 3.
Designing Dual-Band Absorbers by Graphene/Metallic Metasurfaces
Creators: name: Barzegar-Parizi, Saeedeh
name: Khavasi, Amin
Publisher: name: arXiv
Year: 2018
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: This article presents a novel approach for designing dual-band absorbers based on graphene and metallic metasurfaces for terahertz and mid-infrared regimes, respectively. The absorbers are composed of a two-dimensional (2D) array of square patches deposited on a dielectric film terminated by a metal plate. Using an analytical circuit model, we obtain closed-form relations for different parameters of the structure to achieve the dual-band absorber. Two absorption bands with obtained absorptivity of 98% at 0.55 and 1.54 THz for the graphene-based structure and 7 and 25 THz for the metallic-based case are achieved. We demonstrate that the graphene-based absorber remains as dual-band for a wide range of the Fermi level. Furthermore, the proposed dual-band absorbers have a polarization-insensitive characteristic remaining over a wide range of incident angles. The most important advantage of this device is its simplicity compared to previously reported structures.
Fitness dependence of the fixation-time distribution for evolutionary dynamics on graphs
Creators: name: Hathcock, David
name: Strogatz, Steven H.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Populations and Evolution (q-bio.PE)
subject: FOS: Biological sciences

description: Evolutionary graph theory models the effects of natural selection and random drift on structured populations of competing mutant and non-mutant individuals. Recent studies have found that fixation times in such systems often have right-skewed distributions. Little is known, however, about how these distributions and their skew depend on mutant fitness. Here we calculate the fitness dependence of the fixation-time distribution for the Moran Birth-death process in populations modeled by two extreme networks: the complete graph and the one-dimensional ring lattice, obtaining exact solutions in the limit of large network size. We find that with non-neutral fitness, the Moran process on the ring has normally distributed fixation times, independent of the relative fitness of mutants and non-mutants. In contrast, on the complete graph, the fixation-time distribution is a fitness-weighted convolution of two Gumbel distributions. When fitness is neutral the fixation-time distribution jumps discontinuously and becomes highly skewed on both the complete graph and the ring. Even on these simple networks, the fixation-time distribution exhibits rich fitness dependence, with discontinuities and regions of universality. Extensions of our results to two-fitness Moran models, times to partial fixation, and evolution on random networks are discussed.
description: 16 pages, 7 figures, 1 table; SM: 8 pages
Additional file 3: of The effects of add-on corticosteroids on renal outcomes in patients with biopsy proven HIV associated nephropathy: a single centre study from South Africa
Creators: name: Wearne, Nicola
name: Swanepoel, Charles
name: Duffield, Maureen
name: Davidson, Bianca
name: Manning, Kathryn
name: Tiffin, Nicki
name: Boulle, Andrew
name: Rayner, Brian
name: Naidu, Priyanka
name: Ikechi Okpechi
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Marine Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Table S3. Adverse Events. (DOCX 29 kb)
First principles elastic constants and electronic structure of alpha-Pt_2Si and PtSi
Creators: name: Beckstein, O.
name: Klepeis, J. E.
name: Hart, G. L. W.
name: Pankratov, O.
Publisher: name: arXiv
Year: 2000
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: We have carried out a first principles study of the elastic properties and electronic structure for two room-temperature stable Pt silicide phases, tetragonal alpha-Pt_2Si and orthorhombic PtSi. We have calculated all of the equilibrium structural parameters for both phases: the a and c lattice constants for alpha-Pt_2Si and the a, b, and c lattice constants and four internal structural parameters for PtSi. These results agree closely with experimental data. We have also calculated the zero-pressure elastic constants, confirming prior results for pure Pt and Si and predicting values for the six (nine) independent, non-zero elastic constants of alpha-Pt_2Si (PtSi). These calculations include a full treatment of all relevant internal displacements induced by the elastic strains, including an explicit determination of the dimensionless internal displacement parameters for the three strains in alpha-Pt_2Si for which they are non-zero. We have analyzed the trends in the calculated elastic constants, both within a given material as well as between the two silicides and the pure Pt and Si phases. The calculated electronic structure confirms that the two silicides are poor metals with a low density of states at the Fermi level, and consequently we expect that the Drude component of the optical absorption will be much smaller than in good metals such as pure Pt. This observation, combined with the topology found in the first principles spin-orbit split band structure, suggests that it may be important to include the interband contribution to the optical absorption, even in the infrared region.
description: v1: 27 pages, 7 figures, 13 tables submitted to Phys. Rev. B v2: 10 pages, 4 figures, 12 tables (published in Phys. Rev B) contains only ab-initio calculations; valence force field models are now in a separate paper: cond-mat/0106187
Additional file 1 of RAMS11 promotes CRC through mTOR-dependent inhibition of autophagy, suppression of apoptosis, and promotion of epithelial-mesenchymal transition
Creators: name: Islam Khan, Md Zahirul
name: Law, Helen Ka Wai
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Hematology

description: Additional file 1. FASTA sequence of RAMS11
title: ADCO, Septième cartulaire de Saint-Étienne de Dijon (1661-1665), Cart. 29 (G 134), 996 folios, f. 0103
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
name: Petot, Frédéric
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: cartulaire
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge

description: Septième cartulaire de Saint-Étienne de Dijon (1661-1665), Archives départementales de la Côte-d'Or, Cart. 29 (G 134), 996 folios, f. 0103, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Septième cartulaire de Saint-Étienne de Dijon (1661-1665), Archives départementales de la Côte-d'Or, Cart. 29 (G 134), 996 folios, f. 0103, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https://manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
Haemaphysalis tibetensis Hoogstraal 1965
Creators: name: Guglielmone, Alberto A.
name: Nava, Santiago
name: Robbins, Richard G.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Ixodida
Ixodidae
Haemaphysalis
Haemaphysalis tibetensis

description: 164. Haemaphysalis tibetensis Hoogstraal, 1965.    Palearctic: 1) China (north) (Chen et al. 2010, Zhao et al. 2021).
 Haemaphysalis tibetensis was originally identified as Haemaphysalis warburtoni, as explained in Hoogstraal (1965).
description: Published as part of Guglielmone, Alberto A., Nava, Santiago & Robbins, Richard G., 2023, Geographic distribution of the hard ticks (Acari: Ixodida: Ixodidae) of the world by countries and territories, pp. 1-274 in Zootaxa 5251 (1) on page 101, DOI: 10.11646/zootaxa.5251.1.1, http://zenodo.org/record/7704190
Hadronic Spectral Moments in Semileptonic B Decays With a Lepton Energy Cut
Creators: name: Falk, Adam F.
name: Luke, Michael
Publisher: name: arXiv
Year: 1997
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We compute the first two moments of the final hadronic invariant mass in inclusive semileptonic B decay, in the presence of a cut on the charged lepton energy. These moments may be measured directly by experiments at the Upsilon(4S) using the neutrino reconstruction technique, which requires such a cut. Measurement of these moments will place constraints on the nonperturbative parameters \barΛand λ_1, which are relevant for extracting the quark masses m_b and m_c, as well as the CKM angle V_cb. We include terms of order α_s^2β_0 and 1/m_b^3 in the operator product expansion, and use the latter to estimate the theoretical uncertainty in the extraction of \barΛand λ_1.
description: 13 pages, 5 figures, REVTeX
Additional file 1 of Germicide Fenaminosulf Promots Gall Formation of Zizania latifolia without directly affecting the growth of endophytic fungus Ustilago esculenta
Creators: name: Li, Fang
name: Zhang, Juefeng
name: Zhong, Haiying
name: Chen, Jianming
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Plant Biology

description: Additional file 1: Table S1. Paired primers used for qRT-PCR in Ustilago esculenta. Table S2. Paired primers used in Zizania latifolia and Ustilago esculenta for confirming data validation of transcriptome by qRT-PCR. Table S3. List of differentially expressed genes in Zizania latifolia under fenaminosulf stress. Table S4. List of differentially expressed genes in Ustilago esculenta under fenaminosulf stress. Figure S1. Comparison of gene expression patterns obtained by RNA-Seq and qRT-PCR.
Haemaphysalis tiptoni Hoogstraal 1953
Creators: name: Guglielmone, Alberto A.
name: Nava, Santiago
name: Robbins, Richard G.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Ixodida
Ixodidae
Haemaphysalis
Haemaphysalis tiptoni

description: 165. Haemaphysalis tiptoni Hoogstraal, 1953a.
 Afrotropical: 1) Madagascar (Uilenberg et al. 1979, Kolonin 2009).
 The first description of the female of Haemaphysalis tiptoni is in Nuttall & Warburton (1915), under the name Haemaphysalis elongata, as explained in Hoogstraal (1953a).
description: Published as part of Guglielmone, Alberto A., Nava, Santiago & Robbins, Richard G., 2023, Geographic distribution of the hard ticks (Acari: Ixodida: Ixodidae) of the world by countries and territories, pp. 1-274 in Zootaxa 5251 (1) on page 101, DOI: 10.11646/zootaxa.5251.1.1, http://zenodo.org/record/7704190
Additional file 2 of The characterization of key physiological traits of medicinal cannabis (Cannabis sativa L.) as a tool for precision breeding
Creators: name: Naim-Feil, Erez
name: Pembleton, Luke W.
name: Spooner, Laura E.
name: Malthouse, Alix L.
name: Miner, Amy
name: Quinn, Melinda
name: Polotnianka, Renata M.
name: Baillie, Rebecca C.
name: Spangenberg, German C.
name: Cogan, Noel O. I.
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 2: Figure S1 Prediction equation under various ratios of selection pressure. This figure includes a scatterplot for observed versus predicted Bud Dry Weight (BDW) under different ratios of selection pressure. Predicted values are derived from the multiple regression prediction equation (Equation 1, see manuscript). Dot point colours represent prediction accuracy; black colouring consists of 59 genotypes and marks the prediction within 80%-100% accuracy, brown colouring consists of 41 genotypes and marks the prediction within 60% - 80% accuracy and grey colouring consists of 21 genotypes and marks the prediction that is less than 60% accuracy. Red, green, blue and yellow broken lines indicate the BDW value which defined the top 10%, 15%, 20% and 33% observed and predicted genotypes, respectively. Section I signifies matches between predicted and observed high performing genotypes; Section II contains genotypes identified as false negatives by the prediction equation; Section III signifies matches between predicted and observed low performing genotypes and Section IV contains genotypes identified as false positives by the prediction equation.
Defect removal by solvent vapor annealing in thin films of lamellar diblock copolymers
Creators: name: Xu, Xinpeng
name: Man, Xingkun
name: Doi, Masao
name: Ou-Yang, Zhong-can
name: Andelman, David
Publisher: name: arXiv
Year: 2019
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Numerical Analysis (math.NA)
subject: Pattern Formation and Solitons (nlin.PS)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: Solvent vapor annealing (SVA) is known to be a simple, low-cost and highly efficient technique to produce defect-free diblock copolymer (BCP) thin films. Not only can the solvent weaken the BCP segmental interactions, but it can vary the characteristic spacing of the BCP microstructures. We carry out systematic theoretical studies on the effect of adding solvent into lamellar BCP thin films on the defect removal close to the BCP order-disorder transition. We find that the increase of the lamellar spacing, as is induced by addition of solvent, facilitates more efficient removal of defects. The stability of a particular defect in a lamellar BCP thin film is given in terms of two key controllable parameters: the amount of BCP swelling and solvent evaporation rate. Our results highlight the SVA mechanism for obtaining defect-free BCP thin films, as is highly desired in nanolithography and other industrial applications.
description: 14 pages, 9 figures
Transcription de l’édition critique de « Gregorius peccator » par Thomas Klein (Gregorius Digital L3)
Creators: name: Andersen, Peter
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2025

description: Ce document Word est une transcription diplomatique de l’édition critique de « Gregorius peccator » par Thomas Klein (Mittellateinisches Jahrbuch, 47, 2012, p. 213-242), réalisée avec l'accord de l'auteur, contient le récit du Bon Pécheur et est édité dans le cadre du projet Gregorius Digital sous le sigle L3 (dir. Peter Andersen – ARCHE UMR 3400 – Université de Strasbourg)
The Essential Interactions in Oxides and Spectral Weight Transfer in Doped Manganites
Creators: name: Alexandrov, A. S.
name: Bratkovsky, A. M.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: We calculate the value of the Fröhlich electron-phonon interaction in manganites, cuprates, and some other charge-transfer insulators and show that this interaction is much stronger than any relevant magnetic interaction. A polaron shift due to the Fröhlich interaction, which is about 1 eV, suggests that carriers in those systems are small (bi)polarons at all temperatures and doping levels, in agreement with the oxygen isotope effect and other data. An opposite conclusion, recently suggested in the literature, is shown to be incorrect. The frequency and temperature dependence of the optical conductivity of ferromagnetic manganites is explained within the framework of the bipolaron theory.
description: 6 pages, REVTeX 3.1 with 3 eps-figures. Journal version
Additional file 2: of The effects of add-on corticosteroids on renal outcomes in patients with biopsy proven HIV associated nephropathy: a single centre study from South Africa
Creators: name: Wearne, Nicola
name: Swanepoel, Charles
name: Duffield, Maureen
name: Davidson, Bianca
name: Manning, Kathryn
name: Tiffin, Nicki
name: Boulle, Andrew
name: Rayner, Brian
name: Naidu, Priyanka
name: Ikechi Okpechi
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Marine Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Table S2. Baseline and last follow-up eGFR for all patients. (DOCX 32 kb)
Additional file 3 of Patient education program for Brazilians living with diabetes and prediabetes: findings from a development study
Creators: name: Ghisi, Gabriela Lima de Melo
name: Seixas, Mariana Balbi
name: Pereira, Daniele Sirineu
name: Cisneros, Ligia Loiola
name: Ezequiel, Danielle Guedes Andrade
name: Aultman, Crystal
name: Sandison, Nicole
name: Oh, Paul
name: da Silva, Lilian Pinto
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 3. Patient Focus Group Guide.
Haemaphysalis toxopei Warburton 1927
Creators: name: Guglielmone, Alberto A.
name: Nava, Santiago
name: Robbins, Richard G.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Ixodida
Ixodidae
Haemaphysalis
Haemaphysalis toxopei

description: 166. Haemaphysalis toxopei Warburton, 1927.
 Australasian: 1) Indonesia (east of Wallace’s Line); Oriental: 1) Indonesia (west of Wallace´s Line) (Durden et al. 2008).
 Haemaphysalis toxopei is a difficult tick to identify, and its validity may be in question. In the original description of Haemaphysalis toxopei by Warburton (1927), there is a confusing statement, where the female of this tick appears to be the same as that of Haemaphysalis kinneari. Thus, Anastos (1950) treated Haemaphysalis toxopei as a probable synonym of Haemaphysalis kinneari, but Trapido et al. (1964a) considered the statement in Warburton (1927) to be a lapsus. Hoogstraal (1964a) regarded Haemaphysalis toxopei as a subspecies of Haemaphysalis papuana, and Kolonin (2009) did not include Haemaphysalis toxopei in his list of ticks of the world, but it is valid in Camicas et al. (1998), Guglielmone et al. (2014, 2020) and others.
description: Published as part of Guglielmone, Alberto A., Nava, Santiago & Robbins, Richard G., 2023, Geographic distribution of the hard ticks (Acari: Ixodida: Ixodidae) of the world by countries and territories, pp. 1-274 in Zootaxa 5251 (1) on page 101, DOI: 10.11646/zootaxa.5251.1.1, http://zenodo.org/record/7704190
Generation of non-classical light in a photon-number superposition
Creators: name: Loredo, J. C.
name: Antón, C.
name: Reznychenko, B.
name: Hilaire, P.
name: Harouri, A.
name: Millet, C.
name: Ollivier, H.
name: Somaschi, N.
name: De Santis, L.
name: Lemaître, A.
name: Sagnes, I.
name: Lanco, L.
name: Aufféves, A.
name: Krebs, O.
name: Senellart, P.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The ability to generate light in a pure quantum state is essential for advances in optical quantum technologies. However, obtaining quantum states with control in the photon-number has remained elusive. Optical light fields with zero and one photon can be produced by single atoms, but so far it has been limited to generating incoherent mixtures, or coherent superpositions with a very small one-photon term. Here, we report on the on-demand generation of quantum superpositions of zero, one, and even two photons, via pulsed coherent control of a single artificial atom. Driving the system up to full atomic inversion leads to the generation of quantum superpositions of vacuum and one photon, with their relative populations controlled by the driving laser intensity. A stronger driving of the system, with $2π$-pulses, results in a coherent superposition of vacuum, one and two photons, with the two-photon term exceeding the one-photon component, a state allowing phase super-resolving interferometry. Our results open new paths for optical quantum technologies with access to the photon-number degree-of-freedom.
description: Main text: 8 pages, 3 figures. Supp. info: 5 pages, 4 figures
Second Stage String Fragmentation Model
Creators: name: Aithan, Thamar Ali
name: Rosenzweig, Carl
Publisher: name: arXiv
Year: 1998
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: A string model, advocated by Bowler, provides a physical and intuitive picture of heavy quark fragmentation. When supplemented by an ad hoc factor of (1-z), to suppress fragmentation near z=1, it supplies an excellent fit to the data. We extend Bowler's model by accounting for the further decay of the massive mesonic states produced by the initial string breaking. We find that each subsequent string break and cascade decay beyond the first, introduces a factor of (1-z). Furthermore we find that including a finite mass for the quarks, which pop out of the vacuum and split the string, forces the first string breaking to produce massive states requiring further decay. This sequence terminates at the second stage of fragmentation where only relatively "light" heavy meson systems are formed. Thus we naturally account for the phenomenologically required factor of (1-z). We also predict that the ratio of (primary) fragments-vector/(vector plus scalar) should be .61. Our second stage string fragmentation model provides an appealing picture of heavy quark fragmentation.
description: 15 pages
Additional file 2 of Patient education program for Brazilians living with diabetes and prediabetes: findings from a development study
Creators: name: Ghisi, Gabriela Lima de Melo
name: Seixas, Mariana Balbi
name: Pereira, Daniele Sirineu
name: Cisneros, Ligia Loiola
name: Ezequiel, Danielle Guedes Andrade
name: Aultman, Crystal
name: Sandison, Nicole
name: Oh, Paul
name: da Silva, Lilian Pinto
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 2. Tool used for the assessment of information needs of patients identified by diabetes experts (generated by authors).