cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Discovering Relaxed Sound Workflow Nets using Integer Linear Programming
Creators: name: van Zelst, S. J.
name: van Dongen, B. F.
name: van der Aalst, W. M. P.
name: Verbeek, H. M. W.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Data Structures and Algorithms (cs.DS)
subject: FOS: Computer and information sciences

description: Process mining is concerned with the analysis, understanding and improvement of business processes. Process discovery, i.e. discovering a process model based on an event log, is considered the most challenging process mining task. State-of-the-art process discovery algorithms only discover local control-flow patterns and are unable to discover complex, non-local patterns. Region theory based techniques, i.e. an established class of process discovery techniques, do allow for discovering such patterns. However, applying region theory directly results in complex, over-fitting models, which is less desirable. Moreover, region theory does not cope with guarantees provided by state-of-the-art process discovery algorithms, both w.r.t. structural and behavioural properties of the discovered process models. In this paper we present an ILP-based process discovery approach, based on region theory, that guarantees to discover relaxed sound workflow nets. Moreover, we devise a filtering algorithm, based on the internal working of the ILP-formulation, that is able to cope with the presence of infrequent behaviour. We have extensively evaluated the technique using different event logs with different levels of exceptional behaviour. Our experiments show that the presented approach allow us to leverage the inherent shortcomings of existing region-based approaches. The techniques presented are implemented and readily available in the HybridILPMiner package in the open-source process mining tool-kits ProM and RapidProM.
description: technical report related to manuscript submitted to computing journal
title: ADCO, Cartulaire général de Cîteaux, dit de Jean de Cirey, (XVe siècle), tome IV, Cart. 188 (11 H 73), f. 0049v
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: cartulaire

description: Cartulaire général de Cîteaux, dit de Jean de Cirey, (XVe siècle), tome IV, Archives départementales de la Côte-d'Or, Cart. 188 (11 H 73), f. 0049v, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire général de Cîteaux, dit de Jean de Cirey, (XVe siècle), tome IV, Archives départementales de la Côte-d'Or, Cart. 188 (11 H 73), f. 0049v, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
The relevance of the interpersonal theory of suicide for predicting past-year and lifetime suicidality in autistic adults
Creators: name: Moseley, R. L.
name: Gregory, N. J.
name: Smith, P.
name: Allison, C.
name: Cassidy, S.
name: Baron-Cohen, S.
Publisher: name: Apollo - University of Cambridge Repository
Year: 2022
Subjects: Research
Suicide
Thwarted belongingness
Perceived burdensomeness
Acquired capability
Relationships
Age at diagnosis

description: Abstract: Background: While there are known risk factors for suicidality in autistic adults, these are often unconnected from theoretical frameworks that might explain why risk is elevated and guide clinical interventions. The present study investigated the relevance of constructs from the Interpersonal Theory of Suicide (ITS), including perceived burdensomeness, thwarted belongingness and acquired capability for suicide, and explored mechanisms through which certain risk factors (relationship status, age at diagnosis) might elevate suicide risk. Methods: Autistic adults (n = 314) completed an online study including measures of depression, anxiety and constructs from the ITS. Linear and multinomial regression analysis disentangled contributions of ITS variables from effects of depression and anxiety for past-year suicide ideation, past-year and lifetime suicide attempts. Mediation analyses examined associations between risk factors and these suicide outcomes via mechanisms proposed by the ITS. Results: Past-year suicide ideation was associated with burdensomeness, mental rehearsal of suicide plans (a facet of acquired capability), and depression. Greater feelings of burdensomeness, and reduced fear of death, marked out participants who had attempted suicide in comparison to those who had experienced suicide ideation in the past year. Relationship status was indirectly associated with past-year suicide ideation via the mediators of depression and burdensomeness, and was associated with past-year attempts via its effect on ideation. Age at diagnosis was unrelated to any variables. Limitations: Cross-sectional research is insensitive to causality and temporal dynamics, which is likely why interaction hypotheses from the ITS were unsupported. Normative measures may be invalid in autistic samples. There was no control group. The autistic sample was unrepresentative of the whole population, particularly autistic people with intellectual disabilities, ethnic/racial minorities, and gender minorities. Conclusions: Perceived burdensomeness and acquired capability appear potentially important to suicide in autistic people, and may mediate the effects of some risk factors. Future research should explore the temporal dynamics of suicide trajectories in longitudinal, prospective designs.
title: The Assessment Of Cytogenetic And Cytotoxic Effects In Gill Cells Of Blue Mussels (Mytilus Edulis)
Creators: name: Baršiene, Janina
name: Šyvokiene, Janina
name: Rybakovas, Aleksandras
name: Bučinskiene, R.
Publisher: name: ASC 2003 - M - Theme session
Year: 2024
Subjects: Baltic Sea (ICES Ecoregion)
Ecosystem observation, processes and dynamics
Pressures, impacts, conservation, and management

description: No abstracts are to be cited without prior reference to the author.The frequency of micronuclei (MN), bi- or poly-nucleated cells, apoptotic cells, and nuclear buds were assessed in gills of mussels Mytilus edulis inhabiting the Baltic Sea by the Nemirseta, Palanga and Butinge (Lithuanian coastal zone). Mussels were collected in spring and autumn 2001 and 2002. Smears of gill cell suspension were fixed in methanol and stained in 4% Giemsa solution. The investigation was performed within the frame of the EU BEEP project. The main objectives of the study were further development of MN assay in mussels in regard to season, level of pollution, and cytotoxicity, as well as validation of the methodology for exploration of environmental genotoxicity biomarkers in the biological monitoring system. Mussels collected from a reference site (by the Palanga) in spring 2001 demonstrated a low baseline of micronuclei induction (1.2‰). A statistically significant increase of MN frequency (P= 0.0030) was observed in mussels from Palanga station in spring 2002 (after an oil spill in the Butinge oil terminal in November 2001). There was a statistically significant increase (P<0.0001) and relationship between the frequency of micronucleated and apoptotic cells in mussels from Butinge locality after the oil spill. The highest frequencies of bi-polynucleated cells and nuclear buds were detected in mussels, collected during all sampling campaigns from Butinge locality. The discussion on exposure-response relationships of both DNA reactive and non-DNA reactive genotoxins (e.g., aneugens) will be presented.
Mass Loss Rates from Coronal Mass Ejections: A Predictive Theoretical Model for Solar-Type Stars
Creators: name: Cranmer, Steven R.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: Coronal mass ejections (CMEs) are eruptive events that cause a solar-type star to shed mass and magnetic flux. CMEs tend to occur together with flares, radio storms, and bursts of energetic particles. On the Sun, CME-related mass loss is roughly an order of magnitude less intense than that of the background solar wind. However, on other types of stars, CMEs have been proposed to carry away much more mass and energy than the time-steady wind. Earlier papers have used observed correlations between solar CMEs and flare energies, in combination with stellar flare observations, to estimate stellar CME rates. This paper sidesteps flares and attempts to calibrate a more fundamental correlation between surface-averaged magnetic fluxes and CME properties. For the Sun, there exists a power-law relationship between the magnetic filling factor and the CME kinetic energy flux, and it is generalized for use on other stars. An example prediction of the time evolution of wind/CME mass-loss rates for a solar-mass star is given. A key result is that for ages younger than about 1 Gyr (i.e., activity levels only slightly higher than the present-day Sun), the CME mass loss exceeds that of the time-steady wind. At younger ages, CMEs carry 10 to 100 times more mass than the wind, and such high rates may be powerful enough to dispel circumstellar disks and affect the habitability of nearby planets. The cumulative CME mass lost by the young Sun may have been as much as 1% of a solar mass.
description: Accepted for publication in the Astrophysical Journal. 10 pages, 5 figures
title: 02_0784
Creators: name: Wesley Baldwin, John
name: Baldwin, John W.
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2018
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: L'ensemble de ces notes ont été crée par John Baldwin lors d'une de ses premières périodes de résidence à Paris. Ces documents comprennent tous les magistri qu’il avait pu rencontrer dans ses sources. Aux XIIème et XIIIème siècles, les universités n'existant pas encore, le titre de magister s'il évoque certainement une compétence n'est pas rattaché de façon systématique au passage par les écoles. De surcroît, les magistris sont le plus souvent désignés par leur seul prénom. La lecture de ces données est donc difficile et suppose un long travail pour tenter d'identifier un individu auquel on pourrait rattacher plusieurs mentions. John Baldwin avait donc renoncé à utiliser ces données pour donner un prolongement à sa magnifique étude sur les gradués d'université et leur emploi par les Capétiens et les Plantagenêts. Néanmoins, il a conservé ces données et elles sont potentiellement très utile dans le cadre de Studium, comme le sont toutes les mentions dans les volumes des Fasti Ecclesiae Gallicanae de chanoines portant ce titre de magister sans autres précisions. L'ampleur des dépouillements rend ces données très utiles et nous devons une grande reconnaissance à John Baldwin pour avoir pris la peine de faire photocopier ses fiches et de nous les avoir transmises amicalement.
Les données ainsi que les images des fiches sont accessibles sur le site Internet à l'adresse suivante : http://studium-baldwin.lamop.fr/.
Les transcriptions des fiches ont été effectuées par des étudiants de Paris 1 Panthéon - Sorbonne mais elles n'ont pas été corrigées par la suite.
description: Relation: https://lamop.hypotheses.org/
Additional file 2: of Does clinical supervision of healthcare professionals improve effectiveness of care and patient experience? A systematic review
Creators: name: Snowdon, David
name: Leggat, Sandra
name: Taylor, Nicholas
Publisher: name: figshare
Year: 2017
Subjects: subject: Space Science
subject: Medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: Summary table of included studies. Table outlining the characteristics of studies included in this review [22â 38]. (DOCX 45 kb)
Additional file 5 of Transcriptional, epigenetic and metabolic signatures in cardiometabolic syndrome defined by extreme phenotypes
Creators: name: Seyres, Denis
name: Cabassi, Alessandra
name: Lambourne, John J.
name: Burden, Frances
name: Farrow, Samantha
name: McKinney, Harriet
name: Batista, Joana
name: Kempster, Carly
name: Pietzner, Maik
name: Slingsby, Oliver
name: Cao, Thong Huy
name: Quinn, Paulene A.
name: Stefanucci, Luca
name: Sims, Matthew C.
name: Rehnstrom, Karola
name: Adams, Claire L.
name: Frary, Amy
name: Ergüener, Bekir
name: Kreuzhuber, Roman
name: Mocciaro, Gabriele
name: D’Amore, Simona
name: Koulman, Albert
name: Grassi, Luigi
name: Griffin, Julian L.
name: Ng, Leong Loke
name: Park, Adrian
name: Savage, David B.
name: Langenberg, Claudia
name: Bock, Christoph
name: Downes, Kate
name: Wareham, Nicholas J.
name: Allison, Michael
name: Vacca, Michele
name: Kirk, Paul D. W.
name: Frontini, Mattia
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Computational Biology

description: Additional file 5: Fig. S5. Related to Figure 3—A common pattern of associations between the prioritised lipid species and known CMS risk factors. The pattern of association between the prioritised lipids and known CMS risk factors in the NASH cohort (NASH cohort; left) agrees with the results from the present study (BD cohort; right).
Use of environmental testing to identify high risk areas for Johne's disease transmission on cow-calf operations
Creators: name: Breuer, R. M.
name: Garoutte, C. M.
name: Krull, A. C.
name: Kreuder, A. J.
Publisher: name: American Association of Bovine Practitioners  Proceedings of the Annual Conference
Year: 2018

description: The majority of research related to testing and control strategies for decreasing the incidence of Johne's disease has been focused on the dairy industry with little focus on the beef industry. Because of the very different management styles for calf rearing and housing between the 2 industries, there is an urgent need to assess the effectiveness of currently recommended prevention strategies on mitigating the risk of Johne's transmission in beef cow-calf operations. Shedding of Mycobacterium avium subsp paratuberculosis (MAP) by infected adult animals into cow-calf housing areas likely poses the highest risk for spread of Johne's disease within beef herds. Therefore, development of an effective environmental testing strategy specifically designed for cow-calf operations that could be used to identify contaminated areas on farm is warranted.
description: American Association of Bovine Practitioners Proceedings of the Annual Conference, 2018
Star formation histories in mergers: The spatially resolved properties of the early-stage merger LIRGs IC 1623 and NGC 6090
Creators: name: Cortijo-Ferrero, C.
name: Delgado, R. M. González
name: Pérez, E.
name: Fernandes, R. Cid
name: Sánchez, S. F.
name: de Amorim, A. L.
name: Di Matteo, P.
name: García-Benito, R.
name: Lacerda, E. A. D.
name: Fernández, R. López
name: Tadhunter, C.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: The role of major mergers in galaxy evolution is investigated through a detailed characterization of the stellar populations, ionized gas properties, and star formation rates (SFR) in the early-stage merger LIRGs IC 1623 W and NGC 6090, by analysing optical Integral Field Spectroscopy (IFS) and high resolution HST imaging. The spectra were processed with the Starlight full spectral fitting code, and the emission lines measured in the residual spectra. The results are compared with control non-interacting spiral galaxies from the CALIFA survey. Merger-induced star formation is extended and recent, as revealed by the young ages (50-80 Myr) and high contributions to light of young stellar populations (50-90$\%$), in agreement with merger simulations in the literature. These early-stage mergers have positive central gradients of the stellar metallicity, with an average $\sim$0.6 Z$_{\odot}$. Compared to non-interacting spirals, they have lower central nebular metallicity, and flatter profiles, in agreement with the gas inflow scenario. We find that they are dominated by star formation, although shock excitation cannot be discarded in some regions, where high velocity dispersion is found (170-200 km s$^{-1}$). The average SFR in these early-stage mergers ($\sim$23-32 M$_{\odot}$ yr$^{-1}$) is enhanced with respect to main-sequence Sbc galaxies by factors of 6-9, slightly above the predictions from classical merger simulations, but still possible in about 15$\%$ of major galaxy mergers, where U/LIRGs belong.
title: Tributyltincauses Release Of Creatine kinase from Fish Spermatozoa
Creators: name: Grzyb, Katarzyna
name: Rychowski, Michal
name: Biegniewska, Anna
name: Skorkowski, Edward F.
Publisher: name: ASC 2003 - M - Theme session
Year: 2024
Subjects: Baltic Sea (ICES Ecoregion)
Ecosystem observation, processes and dynamics
Pressures, impacts, conservation, and management

description: No abstracts are to be cited without prior reference to the author.We have noticed that creatine kinase (ATP creatine phosphotransferase, EC 2.7.3.2) from herring spermatozoa has high activity (about 452 micromols/min per g of fresh milt) and different electrophoretic mobility from isoenzymes present in skeletal muscle (Comp. Biochem. Physiol., 2003, 134C: 207–213). The toxic effect of TBT on herring spermatozoa was investigating using a specific sperm viability kit (L-7011, Molecular Probes) to observe live and dead sperm cells with a confocal microscope. This is a fluorescence-based method for analysing the viability and fertilizing potential of sperm. When the herring semen is incubated with these two stains, membrane-permeant SYBR 14 nucleic acid stain labels live spermatozoa with green fluorescence, and membrane-impermeant propidium iodide labels the nucleic acids of membrane-compromised spermatozoa with red fluorescence. When semen is incubated briefly with these two stains, live spermatozoa with intact membranes fluoresce bright green, whereas spermatozoa with damaged cell membranes fluoresce red. Treatment of herring spermatozoa with TBT caused a time-dependent decrease of viability: 35% nonviable cells with 5 microM TBT and more than 90% nonviable cells with 10 microM TBT after 6 hours exposure. Creatine kinase release from damaged spermatozoa into the surrounding medium was positively correlated TBT concentration. We suggest that creatine kinase could be a good biomarker of sperm cell membrane degradation in the case where release of LDH from permeabilized cells is not possible for rapid determination of the effect of TBT.
Additional file 1: of Nanopore sequencing of full-length BRCA1 mRNA transcripts reveals co-occurrence of known exon skipping events
Creators: name: Jong, Lucy De
name: Cree, Simone
name: Lattimore, Vanessa
name: Wiggins, George
name: Spurdle, Amanda
name: Miller, Allison
name: Kennedy, Martin
name: Walker, Logan
Publisher: name: figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: is Figure S1 Showing primer design to span BRCA1 cDNA. Primers indicated by arrows positioned on exon 1 and exon 24. Full-length transcript is 7.2 kb. Length of full length amplicon is 5.8 kb. Figure S2 showing results from 47 BRCA1 RT-PCR assays. 2 μl of each reaction was visualised on a 1% agarose gel. Samples that underwent MinION sequencing in Sample 1 or Sample 2 are indicated, and long-range PCR reactions where we confirmed fragments were specific to BRCA1 by Sanger sequencing. 2 μl of each reaction was run on 1% agarose gels. A Protocol 1. B Protocol 2. C Protocol 3. Primer annealing temperature indicated above each lane. Reference markers labelled for size in base pairs. Figure S3 showing a schematic of the nanopore sequencing read filtering steps applied in the study. Figure S4 showing sequencing of the full-length BRCA1 Δ10-17 isoform. Integrated Genome Viewer (IGV) screenshots shown for the whole gene, along with close-up views of exons 9 and 18 (also highlighted by black triangles). BRCA1 exons are indicated and represented as blue solid rectangles. Each MinION sequence read with perfect homology to the reference sequence is shown in grey. Mismatches are shown in colour and indicated by base. (DOCX 3674 kb)
Herd-level prevalence of Johne's disease and BVD, management practices and farm characteristics for positive dairy herds in Utah and Idaho
Creators: name: Wilson, David J.
name: Rood, Kerry A.
name: Whitehouse, Chelsea
name: Bunnell, Jennifer
name: Goodell, Gregory M.
name: Byrem, Todd M.
Publisher: name: American Association of Bovine Practitioners  Proceedings of the Annual Conference
Year: 2018

description: Johne's disease (JD) and bovine viral diarrhea (BVD) are expensive dairy cattle diseases causing production, infertility, and death losses. Herd-level prevalence estimates are 68% for JD and 15% for BVD. The objectives of this study were to estimate regional dairy herd-level prevalence of JD and BVD and evaluate farm characteristics, management, and control practices on farms with either disease detected.
description: American Association of Bovine Practitioners Proceedings of the Annual Conference, 2018
Progesterone supplementation improves fertility of lactating Holstein cows without a corpus luteum at initiation of the timed Al protocol
Creators: name: Omontese, B. O.
name: Diefenbach, M.
name: McSweeney, K.
Publisher: name: American Association of Bovine Practitioners  Proceedings of the Annual Conference
Year: 2018

description: Ovulation synchronization and timed AI programs have been adopted in many dairy herds for managing reproduction in cows. Timed AI programs ensure maximum submission rates. However, pregnancy per AI is reduced when cows do not have a functional CL at initiation of the timed AI protocol. Suboptimal progesterone concentrations as observed in cows without a CL at initiation of timed AI negatively affects the quality of ovulatory follicle, oocyte competence, embryo growth, and endometrial functions. Ultrasound evaluation of the ovaries at initiation of the timed AI protocol combined with targeted progesterone supplementation can improve fertility in dairy cows lacking CL initiation of the timed AI protocol. Intravaginal controlled internal drug release (CIDR) devices offer a practical method to increase plasma progesterone concentrations in cows without a CL at initiation of the timed AI protocol. Our objectives were to evaluate the effects of progesterone supplementation using 1 or 2 intravaginal progesterone inserts on fertility of first service lactating dairy cows without a CL at initiation of the timed AI protocol.
description: American Association of Bovine Practitioners Proceedings of the Annual Conference, 2018
Additional file 1: of Mitochondrial genome sequencing reveals potential origins of the scabies mite Sarcoptes scabiei infesting two iconic Australian marsupials
Creators: name: Tamieka Fraser
name: Renfu Shao
name: Fountain-Jones, Nicholas
name: Charleston, Michael
name: Alynn Martin
name: Whiteley, Pam
name: Roz Holme
name: Carver, Scott
name: Polkinghorne, Adam
Publisher: name: figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology

description: Primer details for long range PCR. The four long range PCR fragments spaning across the mitochondrial genome are 4.4 kb, 4.0 kb, 3.8 kb and 1.7 kb long. These primers are positioned on four main genes; 12S rRNA gene, nd4, cob and cox1. (DOCX 13 kb)
Interference effects in MSSM Higgs searches at the LHC
Creators: name: Fuchs, Elina
name: Weiglein, Georg
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: Complex parameters in the MSSM lead to mixing and interference between the two heavier neutral CP-even and CP-odd Higgs states. These effects can become very large in the case of almost degenerate states. In a CP-violating benchmark scenario, we investigate phenomenological implications of such interferences in view of the LHC searches for heavy Higgs bosons decaying to a pair of $τ$-leptons and produced in gluon fusion and in association with b-quarks. Strongly destructive effects leave parameter regions unconstrained that would be regarded as excluded if no interference terms were taken into account.
description: 5 pages, 2 figures; conference C16-08-03; references updated, some clarifications
Cow-calf pregnancy distribution information from records collected at the time of pregnancy diagnosis
Creators: name: Fountain, T. H.
name: Larson, R. L.
name: White, B. J.
Publisher: name: American Association of Bovine Practitioners  Proceedings of the Annual Conference
Year: 2018

description: Identifying factors that influence pregnancy success is important for both veterinarians and producers to optimize management decisions. The study objective was to evaluate pregnancy diagnosis histograms, and determine if factors such as herd size, breeding season length, body condition of cow, age of cow, or the season of year affected the likelihood of pregnancy at the end of the first 21-day interval and at the end of the breeding season.
description: American Association of Bovine Practitioners Proceedings of the Annual Conference, 2018
Bulls as a source of bovine leukemia virus during natural breeding
Creators: name: Benitez, O. J.
name: Roberts, J.
name: Norby, B.
name: Bartlett, P.
name: Maeroff, J. E.
name: Grooms, D. L.
Publisher: name: American Association of Bovine Practitioners  Proceedings of the Annual Conference
Year: 2018

description: Bovine leukosis is a chronic lymphoproliferative disorder in cattle caused by the deltaretrovirus, bovine leukemia virus (BLV). Most BLV infected animals remain asymptomatic and act as carriers of the virus; 30 to 40% of infected cattle develop a persistent lymphocytosis, while less than 5% progress to lymphosarcoma. The major route of virus transmission is believed to be iatrogenic through procedures that permit the transfer of blood between cattle. Proviral DNA has been identified in nasal secretions, saliva, semen, and smegma. Natural transmission through these secretions has not been clearly demonstrated. Our research group has identified the use of bulls in dairy herds as a risk factor for BLV infection at the herd level, and has also shown a high prevalence ( 45%) of infected beef bulls in Michigan. Natural service is still used in half of dairy operations across the US, and is the most commonly used breeding method (approximately 90%) in beef cattle herds in the US. Given these factors, there may be risk of BLV transmission during natural breeding via smegma or blood transfer following trauma to the penis, vulva, and vagina. The overall goal of our research team is to develop cost effective strategies to reduce the transmission of BLV in cattle herds. The objective of this study is to assess the risk of BLV transmission by breeding bulls during natural breeding.
description: American Association of Bovine Practitioners Proceedings of the Annual Conference, 2018
How to Detect Inclined Water Maser Disks (and Possibly Measure Black Hole Masses)
Creators: name: Darling, Jeremy
Publisher: name: arXiv
Year: 2017
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We describe a method to identify inclined water maser disks orbiting massive black holes and to potentially use them to measure black hole masses. Due to the geometry of maser amplification pathways, the minority of water maser disks are observable: only those viewed nearly edge-on have been identified, suggesting that an order of magnitude additional maser disks exist. We suggest that inward-propagating masers will be gravitationally deflected by the central black hole, thereby scattering water maser emission out of the disk plane and enabling detection. The signature of an inclined water maser disk would be narrow masers near the systemic velocity that appear to emit from the black hole position, as identified by the radio continuum core. To explore this possibility, we present high resolution (0.07"-0.17") Very Large Array line and continuum observations of 13 galaxies with narrow water maser emission and show that three are good inclined disk candidates (five remain ambiguous). In the best case, for CGCG 120$-$039, we show that the maser and continuum emission are coincident to within $3.5\pm1.4$ pc ($6.7\pm2.7$ milliarcsec). Subsequent very long baseline interferometric maps can confirm candidate inclined disks and have the potential to show maser rings or arcs that provide a direct measurement of black hole mass, although the mass precision will rely on knowledge of the size of the maser disk.
description: 19 pages, accepted for publication in ApJ
Comparison of ante-mortem and post-mortem diagnosis of ovarian follicular dysplasia in Florida beef herds
Creators: name: Nobre, H.
name: Gard, J.
name: Roberts, J.
name: Wenzel, J.
name: Edmondson, M.
name: Braden, T.
Publisher: name: American Association of Bovine Practitioners  Proceedings of the Annual Conference
Year: 2018

description: Studies commissioned by the Florida Cattleman's Association in 2007 and 2016 found ovarian follicular dysplasia (OFD) as a primary cause of infertility in Florida beef cows. Ovarian follicular dysplasia (OFD) is a slowly progressive bilateral abnormal growth and/ or development of ovarian follicles eventually transforming into Sertoli-form Granulosa Cell Tumor. Later stages OFD, grades III and IV, seem to be able to be reliably detected via ultrasound examination of the ovaries using a 7 MHz probe. The objective of this study was to determine the variation in ante-mortem and post-mortem ultrasound examination when compared to histologic findings utilizing a 7 and 8.5 MHz ultrasound probe. Our hypothesis was that a 7 or 8.5 MHz ultrasound could be utilized for detection of earlier stages of OFD.
description: American Association of Bovine Practitioners Proceedings of the Annual Conference, 2018
A shorter on-farm dairy welfare assessment protocol that can provide useful feedback to producers
Creators: name: Jewell, M. T.
name: Cameron, M.
name: Spears, J.
name: McKenna, S.
name: Cockram, M. S.
name: Sanchez, J.
name: Keefe, G. P.
Publisher: name: American Association of Bovine Practitioners  Proceedings of the Annual Conference
Year: 2018

description: On-farm dairy welfare assessments are important tools for the dairy industry. There are several existing assessment protocols; however, these can be quite time-consuming to complete on-farm. The aim of our study was to modify an existing Canadian assessment protocol, the basis for the Dairy Farmers of Canada animal assessment program, to reduce the amount of time needed to complete an assessment on-farm. The original assessment required 2 separate visits to the farm, which took on average 8 to 9 hours and 4 hours to complete, respectively. The goal for the modified assessment protocol was to complete an assessment in a single 6 to 8 hour visit.
description: American Association of Bovine Practitioners Proceedings of the Annual Conference, 2018
Pharmacokinetics of tulathromycin following administration with remote delivery devices
Creators: name: Rivera, J. D.
name: Woolums, A. R.
name: Giguere, S.
name: Johnson, J. T.
name: Lutz, A. G.
name: Tipton, P. N.
name: Crosby, W.
name: Hice, I.
Publisher: name: American Association of Bovine Practitioners  Proceedings of the Annual Conference
Year: 2018

description: Remote delivery devices (ROD, aka dart guns) are used to administer antimicrobials (AM) to cattle in situations when individual treatment by manual injection is logistically difficult. However, it is not clear whether the pharmacokinetics (PK) of AM administered by remote delivery device is comparable to that for AM administered by injection; thus it is not certain that cattle treated by ROD experience equivalent AM effect.
description: American Association of Bovine Practitioners Proceedings of the Annual Conference, 2018
Self-trapping of excitations: Two-dimensional quasiparticle solitons in an extended Bose-Hubbard dimer array
Creators: name: Dey, Amit
name: Vardi, Amichay
Publisher: name: arXiv
Year: 2016
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: Pattern Formation and Solitons (nlin.PS)
subject: FOS: Physical sciences

description: Considering a two-dimensional Bose-Hubbard spinor lattice with weak nearest neighbour interactions and no particle transfer between sites, we theoretically study the transport of energy from one initially excited dimer, to the rest of the lattice. Beyond a critical interaction strength, low energy on-site excitations are quickly dispersed throughout the array, while stronger excitations are self trapped, resulting in localized energy breathers and solitons. These structures are quasiparticle analogues to the discrete 2D solitons in photonic lattices. Full many-body simulations additionally demonstrate the localization of one-particle entropy.
description: 5 pages, 4 figures
Effects of local anesthetic or systemic analgesia on pain associated with cautery disbudding in calves
Creators: name: Winder, C. B.
name: Miltenburg, C. L.
name: Sargeant, J. M.
name: LeBlanc, S. J.
name: Haley, D. B.
name: Lissemore, K. D.
name: Godkin, M. A.
name: Duffield, T. F.
Publisher: name: American Association of Bovine Practitioners  Proceedings of the Annual Conference
Year: 2018

description: Disbudding is a common management procedure performed on dairy farms and, when done without pain mitigation, is viewed as a key welfare issue. Use of pain control has increased in recent years, but full adoption of anesthesia and analgesia by veterinarians or dairy producers has not been achieved. Part of the gap between primary research and application in the dairy industry may be driven by the lack of a consistent set of recommendations from primary research papers. Likewise, narrative reviews typically do not include evidence-based methods to identify, assess, and synthesize results; as a result, conclusions may suffer from bias. Conversely, properly conducted systematic reviews offer a more robust and transparent methodology to identify, evaluate, and summarize evidence on a given topic. Meta-analysis also allow for synthesis of overall effects as well as identification and exploration of causes of heterogeneity among studies, possibly identifying sources of variability that may be further examined or used to guide inferences of the robustness of the observed effects across different study designs or settings. The objective of this systematic review was to examine the effects of these pain control practices for the most common method of disbudding (cautery) on outcomes associated with disbudding pain in calves.
description: American Association of Bovine Practitioners Proceedings of the Annual Conference, 2018
title: DDT And PCB Concentrations Dependency On The Biology And Domicile Of Fish: An Example Of Perch (Perca Fluviatilis L. ) In Estonian Coastal Sea
Creators: name: Järv, Leili
name: Roots, Ott
name: Siim, Mart
Publisher: name: ASC 2003 - M - Theme session
Year: 2024
Subjects: Baltic Sea (ICES Ecoregion)
Ecosystem observation, processes and dynamics
Pressures, impacts, conservation, and management

description: No abstracts are to be cited without prior reference to the author.The concentration of DDT and PCB in perch of different areas of Estonian coastal sea has been studied since 1998. The concentration of DDT and PCB of immature perch (L<15cm), feeding mostly on plankton and benthic organisms, has been low. During the maturation of perch (L=15â€“25 cm), when the different fish species started to dominate in the ration of perch, the DDT and PCB concentration increased. After the first spawning the DDT and PCB concentration decreased: probably partially excreted during the spawning process. There were observed also differences in concentrations of toxicants in a perch living in different areas of coastal sea. At the present time the contents of toxic chlororganic compounds, analysed in the Baltic perch of Estonian coastal sea, remain below standards established by FAO/WHO in food, in which case the content of toxicants in the food does not cause symptoms of illness in case of people.
title: ADCO, Cartulaire de l'abbaye de Cîteaux dit Cartulare Antiquum t.3 (2e moitié XIIIe siècle), Cart. 168 (11 H 66), f. 0191v
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2010
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: LaMOP
subject: Corpus Burgundiae Medii Aevi
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Chartes de la Bourgogne du Moyen Âge
subject: cartulaire

description: Cartulaire de l'abbaye de Cîteaux dit Cartulare Antiquum t.3 (2e moitié XIIIe siècle), Archives départementales de la Côte-d'Or, Cart. 168 (11 H 66), f. 0191v, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire de l'abbaye de Cîteaux dit Cartulare Antiquum t.3 (2e moitié XIIIe siècle), Archives départementales de la Côte-d'Or, Cart. 168 (11 H 66), f. 0191v, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
description: Provenance: http://www.wikidata.org/entity/Q843261
description: Provenance: abbaye de Cîteaux
MOESM1 of Optimizing recombinant protein expression via automated induction profiling in microtiter plates at different temperatures
Creators: name: Mühlmann, Martina
name: Forsten, Eva
name: Noack, Saskia
name: Büchs, Jochen
Publisher: name: figshare
Year: 2017
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Biotechnology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 20199 Astronomical and Space Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 1: Figure S1. Induction profile with automated addition of 0–1 mM IPTG solution after 1–10 h of cultivation time at 30 °C. Figure S2. Comparison of induction profiles at 30 and 37 °C in 48-well plates and 96-well plates. Figure S3. Comparison of selected induction conditions at 30 and 34 °C measured in a RAMOS and a BioLector device. Figure S4. Comparison of selected induction conditions at 30 and 34 °C measured in a RAMOS and a BioLector device. Figure S5. Calibration curves for conversion of scattered light measured by the RoboLector device to standard optical density in 48-well and 96-well plates.
title: ADCO, Cartulaire de Cîteaux pour les possessions de Chaugey et Maison-Dieu (Fin XVe siècle), Cart. 181 (11 H 754), 165 folios, f. 0087
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2017
name: Petot, Frédéric
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: cartulaire
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge

description: Cartulaire de Cîteaux pour les possessions de Chaugey et Maison-Dieu (Fin XVe siècle), Archives départementales de la Côte-d'Or, Cart. 181 (11 H 754), 165 folios, f. 0087, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire de Cîteaux pour les possessions de Chaugey et Maison-Dieu (Fin XVe siècle), Archives départementales de la Côte-d'Or, Cart. 181 (11 H 754), 165 folios, f. 0087, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: http://www.wikidata.org/entity/Q843261
description: Provenance: abbaye de Cîteaux
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
Optical quality assurance of GEM foils
Creators: name: Hildén, T.
name: Brücken, E.
name: Heino, J.
name: Kalliokoski, M.
name: Karadzhinova, A.
name: Lauhakangas, R.
name: Tuominen, E.
name: Turpeinen, R.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Instrumentation and Detectors (physics.ins-det)
subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: An analysis software was developed for the high aspect ratio optical scanning system in the Detec- tor Laboratory of the University of Helsinki and the Helsinki Institute of Physics. The system is used e.g. in the quality assurance of the GEM-TPC detectors being developed for the beam diagnostics system of the SuperFRS at future FAIR facility. The software was tested by analyzing five CERN standard GEM foils scanned with the optical scanning system. The measurement uncertainty of the diameter of the GEM holes and the pitch of the hole pattern was found to be 0.5 μm and 0.3 μm, respectively. The software design and the performance are discussed. The correlation between the GEM hole size distribution and the corresponding gain variation was studied by comparing them against a detailed gain mapping of a foil and a set of six lower precision control measurements. It can be seen that a qualitative estimation of the behavior of the local variation in gain across the GEM foil can be made based on the measured sizes of the outer and inner holes.
description: 12 pages, 29 figures
title: Examining the relationship between climate and environmental variability, and societal change, during the past 1000 years in South-East England
Creators: name: Thoma, Sarah
Publisher: name: University of Reading
Year: 2022

description: South-East England is poorly understood in terms of its environmental history due to a paucity 
of natural wetland sites, especially lakes and mires, spanning much of the Late Holocene 
particularly during the last 1000 years. The historic period has been largely neglected as a 
focus for environmental reconstruction despite the clear evidence for climate variability from 
ice core, marine, tree ring, glaciological, speleothem and lake sedimentary proxy records. 
Short-term climate changes such as the Little Ice Age, Dalton and Maunder minima would 
have had a marked impact on the densely populated, agricultural regions of South-East 
England. Therefore, despite its importance with respect to its cultural, economic and political 
history, we know little about the interrelationships between climate, environmental and 
societal change in the South-East.
The novel approach adopted in this research was the use of artificial lowland wetlands(ponds, 
mires and moats), which provided the potential for compiling high temporal resolution 
records of environmental change. These wetlands provided an opportunity to trace changes 
in the vegetation cover, landscape erosion, pollution and fire history, which could be 
integrated with historical, archaeological and proxy data for climate and societal change. The 
research focused on palaeoenvironmental investigations at five artificial wetland sites: 
Glovers Pond, Woking Palace, Old Alresford Pond, Knepp and Lurgashall Mill Ponds. This 
multiproxy study used analyses of sediment description, palynology, µXRF analysis (to 
determine detrital indicators and industrial pollutants), magnetic susceptibility (to infer influx 
of terrigenous material/burning) and organic matter determination (to infer autochthonous 
and allochthonous organic productivity). Detection of trace metals using ICP-OES and Pb 
isotopic analysis (to trace Pb pollution) was conducted at Knepp Mill Pond. 
The results demonstrate that these types of site can hold a rich archive of important, high-resolution, local and extra-local information. The reconstructed records were found to cover
the historic period at Woking Palace, Old Alresford Pond and Lurgashall Pond. Glovers Pond 
and Knepp Mill Pond deposits were identified as being much older than anticipated (Glovers 
Pond spanning from the Mesolithic to the Bronze Age), while Knepp Mill Pond extended from 
the Iron Age to the Post-Roman period. Both sites provided valuable new 
palaeoenvironmental records for the South-East, including Bronze Age, Iron Age and Roman 
Pb pollutant histories.