cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Study of anyon condensation and topological phase transitions from a $\mathbb{Z}_4$ topological phase using Projected Entangled Pair States
Creators: name: Iqbal, Mohsin
name: Duivenvoorden, Kasper
name: Schuch, Norbert
Publisher: name: arXiv
Year: 2017
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We use Projected Entangled Pair States (PEPS) to study topological quantum phase transitions. The local description of topological order in the PEPS formalism allows us to set up order parameters which measure condensation and deconfinement of anyons, and serve as a substitute for conventional order parameters. We apply these order parameters, together with anyon-anyon correlation functions and some further probes, to characterize topological phases and phase transitions within a family of models based on a $\mathbb Z_4$ symmetry, which contains $\mathbb Z_4$ quantum double, toric code, double semion, and trivial phases. We find a diverse phase diagram which exhibits a variety of different phase transitions of both first and second order which we comprehensively characterize, including direct transitions between the toric code and the double semion phase.
description: 21+6 pages
Classification of integrable Vlasov-type equations
Creators: name: Odesskii, A. V.
name: Pavlov, M. V.
name: Sokolov, V. V.
Publisher: name: arXiv
Year: 2007
Subjects: subject: Exactly Solvable and Integrable Systems (nlin.SI)
subject: High Energy Physics - Theory (hep-th)
subject: Mathematical Physics (math-ph)
subject: Quantum Algebra (math.QA)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: Classification of integrable Vlasov-type equations is reduced to a functional equation for a generating function. A general solution of this functional equation is found in terms of hypergeometric functions.
description: latex, 15 pages, to appear in Theoretical and Mathematical Physics
title: Boundaries and Borders: Choreographies among the Rum Orthodox of Old City Jerusalem
Creators: name: Tsourous, Georgios
name: CBRL
Publisher: name: University of Kent
Year: 2018

description: This thesis explores lived Christianity as witnessed through long-term anthropological fieldwork in Jerusalem's Old City and the Church of the Holy Sepulchre (also known as the Church of the Anastasis), the place that hosts the sites of the Crucifixion and burial of Jesus of Nazareth, among other shrines. The study focuses on how people within the Rum Orthodox community, both clerical and lay, navigate intra-communal networks, as well as those linking them with members of other Christian communities. Within the Church of the Anastasis, fragile legal agreements between different Churches, and the intersection of ethnicity and theology, create a complex reality of overlapping borders and a fragile coexistence among the resident communities. In order to unpack this, the thesis explores the Anastasis shared sacred space and the ways denominational boundaries as well as spatial borders are formed and maintained by the Greek custodian group. The thesis employs a materialist view arguing that any examination of the ways borders have been shaped in the Anastasis will benefit from considering the material aspects of religious practices - as they are followed both within and outside the Anastasis Church - as these shed light onto how people perceive similarities and differences across boundaries and borders. In contrast to the Anastasis context, lay Christians in the vicinity of the Old City interact in ways that push beyond denominational boundaries by crossing spatial borders attending each other's services and engaging in what this thesis calls 'border- crossing practices'. These are devotional practices that local (Palestinian) Orthodox follow that often diverge from the Orthodox Church's approved practice (orthopraxis). The study discusses the distinctive border-crossing attitudes, of local (Palestinian) Orthodox, who often perceive the Church's borders as problematic. By exploring how Jerusalem's Christians negotiate boundaries and borders, this thesis makes a novel contribution to discussions of contemporary shared sacred spaces as well as to debates in anthropology of Christianity and its material culture.
Visión integral de las bibliotecas: función, valor, servicios, recursos, usuarios y estrategias
Creators: name: Carmona, Víctor Julián Cid
name: Villa, Micaela Chávez
name: Farfán, Jonathan Israel Escobar
name: Vallarta, Claudia Escobar
name: Andrade, Lourdes Guerrero
name: Torre, Silvia Eunice Gutiérrez De La
name: Reyes, José Valentín Ortiz
name: Herrera, María Lourdes Quiroa
name: Burgoa, Eduardo Ruvalcaba
name: Díaz, María Guadalupe Vega
Publisher: name: Zenodo
Year: 2019
Subjects: Bibliotecas públicas
Servicios bibliotecarios
Gestión de servicios en Bibliotecas
Public Libraries
Public libraries Services
Information Services

description: Se ofrecen los contenidos del curso "Visión integral de las bibliotecas: función, valor, servicios, recursos, usuarios y estrategias" impartido por personal académico de la Biblioteca Daniel Cosío Villegas de El Colegio de México. El curso tiene por objetivo: sensibilizar al personal de las bibliotecas públicas sobre el rol social que desempeñan frente a las comunidades que atienden y desarrollar en ellos actitudes que deriven en mejores servicios para sus usuarios. Los contenidos del curso son: La biblioteca pública, función, servicios, misión, encuentro y comunidad, organización de la información impartido por Guadalupe Vega Díaz El valor social de las bibliotecas y de su personal impartido por Lourdes Quiroa Herrera Estrategias para desarrollar comunidades, vinculación con actores del entorno impartido por Lourdes Guerrero Andrade ¿Quién es mi usuario? Diferentes estrategias de atención para diferentes tipos de usuario impartido por Víctor Cid Carmona Mejores servicios hacen mejores usuarios: la formación de usuarios autónomos impartido por Israel Escobar Farfán La gestión de los servicios impartido por Valentín Ortiz Reyes Los recursos de información en las bibliotecas impartido por Eduardo Ruvalcaba Burgoa El trabajo en red: aprovechar los recursos tecnológicos para socializar experiencias y prácticas impartido por Claudia Escobar Vallarta y Silvia Gutiérrez de la Torre
description: {"references": ["Hernon, P., & Matthews, J. R. (2013). Reflecting on the Future of Academic and Public Libraries. American Library Association.", "https://www.anythinklibraries.org/"]}
title: Ly alpha EMISSION FROM COSMIC STRUCTURE. I. FLUORESCENCE
Creators: name: Kollmeier, JA
name: Zheng, Z
name: Dave, R
name: Gould, A
name: Katz, N
name: Miralda-Escude, J
name: Weinberg, DH
Publisher: name: University of Massachusetts Amherst
Year: 2010
Subjects: subject: cosmology: theory
subject: galaxies: formation
subject: hydrodynamics
subject: intergalactic medium
subject: radiative transfer
subject: scattering
subject: Astrophysics and Astronomy

description: This is the pre-published version harvested from ArXiv. The published version is located at http://iopscience.iop.org/0004-637X/708/2/1048/
description: We present predictions for the fluorescent Lyα emission signature arising from photoionized, optically thick structures in smoothed particle hydrodynamic cosmological simulations of a ΛCDM universe using a Monte Carlo Lyα radiative transfer code. We calculate the expected Lyα image and two-dimensional spectra for gas exposed to a uniform ultraviolet ionizing background as well as gas exposed additionally to the photoionizing radiation from a local quasar, after correcting for the self-shielding of hydrogen. As a test of our numerical methods and for application to current observations, we examine simplified analytic structures that are uniformly or anisotropically illuminated. We compare these results with recent observations. We discuss future observing campaigns on large telescopes and realistic strategies for detecting fluorescence owing to the ambient metagalactic ionization and in regions close to bright quasars. While it will take hundreds of hours on the current generation of telescopes to detect fluorescence caused by the ultraviolet background alone, our calculations suggest that on the order of 10 sources of quasar-induced fluorescent Lyα emission should be detectable after a 10 hr exposure in a 10 arcmin2 field around a bright quasar. These observations will help probe the physical conditions in the densest regions of the intergalactic medium as well as the temporal light curves and isotropy of quasar radiation.
Metrics to increase data usage understanding and transparency
Creators: name: Esteva, Maria
name: Freeze, Joshua
name: Carson, James
name: Jansen, Craig
Publisher: name: Zenodo
Year: 2024
Subjects: Trust and transparency between universal standards and expectations and that of context and discipline specific adaptations
Building trust and transparency into research and curation techniques, costs, and workflows
Transparency as a means of demonstrating research integrity
Make Data Count
data metrics
data usage communication
natural hazards
data impact

description: We introduce analysis of usage metrics used by the DesignSafe Data Depot, a natural hazards data repository. Make Data Count compliant metrics are analyzed in relation to research methods, natural hazard types, and time to learn what is used and why. Results are used for reporting, to inform the user community, and to direct training and marketing strategies.
Slowly rotating wormholes: the first order approximation
Creators: name: Kashargin, P. E.
name: Sushkov, S. V.
Publisher: name: arXiv
Year: 2007
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We discuss a solution describing a rotating wormhole in the theory of gravity with a scalar field with negative kinetic energy. To solve the problem we use the assumption about slow rotation. The role of a small dimensionless parameter plays the ratio of the linear velocity of rotation of the wormhole's throat and the velocity of light. The rotating wormhole solution is constructed in the framework of the first order approximation with respect to the small parameter. We analyze the obtained solution and study the motion of test particles and the propagation of light in the spacetime of rotating wormhole.
description: 7 pages, 2 figures, submitted to Gravitation and Cosmology
Fissurina undefined-f
Creators: name: Margerel, Jean-Pierre
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Chromista
Foraminifera
Nodosariata
Polymorphinida
Ellipsolagenidae
Fissurina
Fissurina undefined-F

description: Fissurina sp. F (Fig. 8H, I)
LOCALITÉ. — Thenay (le Mincé).
MATÉRIEL EXAMINÉ. — Échantillon T’M 863 (référence UP-coll. JPM 486).
DESCRIPTION
Test à contour ovale, presque circulaire, à section biconvexe, la partie distale munie de deux jupes en arc de cercle. Paroi lisse.
description: Published as part of Margerel, Jean-Pierre, 2009, Les foraminifères benthiques des Faluns du Miocène moyen du Blésois (Loir-et-Cher) et de Mirebeau (Vienne) dans le Centre-Ouest de la France, pp. 577-621 in Geodiversitas 31 (3) on page 591, DOI: 10.5252/g2009n3a5, http://zenodo.org/record/10111294
Quantification and the language of thought
Creators: name: Kemp, Charles
Publisher: name: Carnegie Mellon University
Year: 2009
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology

description: Many researchers have suggested that the psychological complexity of a concept is related to the length of its representation in a language o f thought. As yet, however, there are few concrete proposals about the nature o f this language. This paper makes one such proposal: the language of thought allow s first order quantification (quantification over objects) more readily than second-order quantification (quantification over features). To support this proposal we present behavioral results from a concept learning study inspired by the work of Shepard, Hovland and Jenkins
Quantization of the Schwarzschild black hole: a Noether symmetry approach
Creators: name: Vakili, Babak
Publisher: name: arXiv
Year: 2011
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We study the canonical formalism of a spherically symmetric space-time. In the context of the 3+1 decomposition with respect to the radial coordinate $r$, we set up an effective Lagrangian in which a couple of metric functions play the role of independent variables. We show that the resulting $r$-Hamiltonian yields the correct classical solutions which can be identified with the Schwarzschild black hole. The Noether symmetry of model is then investigated by utilizing the behavior of the corresponding Lagrangian under the infinitesimal generators of the desired symmetry. According to the Noether symmetry approach, we also quantize the model and show that the existence of a Noether symmetry yields a general solution to the Wheeler-DeWitt equation where exhibits a good correlation with the classical regime. We use the resulting wave function in order to (qualitative) investigate the possibility of the avoidance of classical singularities.
description: 11 pages, no figures, revised version
Cosmology with 21cm intensity mapping
Creators: name: Carucci, Isabella P.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: The nature of the most abundant components of the Universe, dark energy and dark matter, is still to be uncovered. I tackle this subject considering a novel cosmological probe: the neutral hydrogen emitted 21cm radiation, observed with the intensity mapping technique. I analyse competitive and realistic dark energy and dark matter models and show how they produce distinctive and detectable effects on the 21cm signal. Moreover, I provide radio telescope forecasts showing how these models will be distinguishable in an unprecedented way.
description: 6 pages, 3 figures. Proceedings of the 8th Young Researcher Meeting, Cagliari, May 29 to June 1, 2017. To be published in Journal of Physics: Conference Series (IOP)
Stability of charged thin shells
Creators: name: Eiroa, Ernesto F.
name: Simeone, Claudio
Publisher: name: arXiv
Year: 2011
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: In this article we study the mechanical stability of spherically symmetric thin shells with charge, in Einstein-Maxwell and Einstein-Born-Infeld theories. We analyze linearized perturbations preserving the symmetry, for shells around vacuum and shells surrounding non charged black holes.
description: 8 pages, 2 figures. v2: Improved version, new references added
Additional file 7 of CLEC3B as a potential diagnostic and prognostic biomarker in lung cancer and association with the immune microenvironment
Creators: name: Sun, Jiaxing
name: Xie, Tian
name: Jamal, Muhammad
name: Tu, Zhenbo
name: Li, Xinran
name: Wu, Yingjie
name: Li, Jingyuan
name: Zhang, Qiuping
name: Huang, Xiaoxing
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 7: Table S4. Enrichment of GO in the CLEC3B high expression group of ADC
Fissurina undefined-g
Creators: name: Margerel, Jean-Pierre
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Chromista
Foraminifera
Nodosariata
Polymorphinida
Ellipsolagenidae
Fissurina
Fissurina undefined-G

description: Fissurina sp. G (Fig. 8J, K)
LOCALITÉ. — Thenay (le Mincé).
MATÉRIEL EXAMINÉ. — Échantillon T’M 861 (référence UP-coll. JPM 487).
DESCRIPTION
Test hyalin à contour ovale, très aplati, à bord arrondi, les deux faces bordées par un sillon interrompu dans la partie distale.
description: Published as part of Margerel, Jean-Pierre, 2009, Les foraminifères benthiques des Faluns du Miocène moyen du Blésois (Loir-et-Cher) et de Mirebeau (Vienne) dans le Centre-Ouest de la France, pp. 577-621 in Geodiversitas 31 (3) on page 591, DOI: 10.5252/g2009n3a5, http://zenodo.org/record/10111294
title: ADCO, Premier cartulaire de l'abbaye de Molesmes (XIIe siècle), Cart. 142 (7 H 6), 128 pages, f. 0016v
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2009
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: cartulaire

description: Premier cartulaire de l'abbaye de Molesmes (XIIe siècle), Archives départementales de la Côte-d'Or, Cart. 142 (7 H 6), 128 pages, f. 0016v, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Premier cartulaire de l'abbaye de Molesmes (XIIe siècle), Archives départementales de la Côte-d'Or, Cart. 142 (7 H 6), 128 pages, f. 0016v, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye de Molesme
description: Provenance: http://www.wikidata.org/entity/Q334044
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb137389344
Analytic approximations, perturbation methods, and their applications
Creators: name: Jaranowski, P.
name: Arun, K. G.
name: Barack, L.
name: Blanchet, L.
name: Buonanno, A.
name: De Laurentis, M. F.
name: Detweiler, S.
name: Dittus, H.
name: Favata, M.
name: Faye, G.
name: Friedman, J. L.
name: Ganz, K.
name: Hikida, W.
name: Iyer, B. R.
name: Keidl, T. S.
name: Kim, Dong-Hoon
name: Kokkotas, K. D.
name: Kol, B.
name: Kubeka, A. S.
name: Lämmerzahl, C.
name: Majár, J.
name: Nagar, A.
name: Nakano, H.
name: Price, L. R.
name: Qusailah, M. S. S.
name: Radicella, N.
name: Sago, N.
name: Singh, D.
name: Sotani, H.
name: Tanaka, T.
name: Tartaglia, A.
name: Vasúth, M.
name: Vega, I.
name: Whiting, B. F.
name: Wiseman, A. G.
name: Yoshida, S.
Publisher: name: arXiv
Year: 2007
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: The paper summarizes the parallel session B3 {\em Analytic approximations, perturbation methods, and their applications} of the GR18 conference. The talks in the session reported notably recent advances in black hole perturbations and post-Newtonian approximations as applied to sources of gravitational waves.
description: Summary of the B3 parallel session of the GR18 conference
TranslatingSiamese classical literature in French:a challenge
Creators: name: DELOUCHE, Gilles
Publisher: name: คณะศิลปศาสตร์ มหาวิทยาลัยธรรมศาสตร์
Year: 2020
Subjects: Thai classical literature
Translation Thai-French
Poetry translation

description: วารสารศิลปศาสตร์ มหาวิทยาลัยธรรมศาสตร์, 20, 1, 19-39
The Moist Greenhouse is Sensitive to Stratospheric Temperature
Creators: name: Ramirez, Ramses M.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: In this Research Note, I use my single-column climate model to explicitly show that the moist greenhouse surface temperature threshold is sensitive to stratospheric temperature. I argue that this explains most of the discrepancy between 1-D and recent 3-D computations of the moist greenhouse threshold for M-star planets given that calculated stratospheric (and upper atmospheric) temperatures are higher than what are usually assumed in 1-D calculations. I suggest that collaborations between the two sets of modelers would lead to greater understanding of the moist greenhouse threshold. I also discuss implications for habitability if high stratospheric temperatures are a common feature on M-star planets near the inner edge.
description: Published in the Research Notes of the AAS (4 pages, 1 figure)
ปัญหาการแปลภาษาญี่ปุ่นเป็นภาษาไทย -ปัญหาเกี่ยวกับโครงสร้างประโยค-
Creators: name: สมเกียรติ เชวงกิจวณิช
Publisher: name: คณะศิลปศาสตร์ มหาวิทยาลัยธรรมศาสตร์
Year: 2020
Subjects: ปัญหาการแปล
ภาษาญี่ปุ่น
ภาษาไทย
โครงสร้างประโยค

description: วารสารศิลปศาสตร์ มหาวิทยาลัยธรรมศาสตร์, 20, 1, 40-67
Quality of Life Following Prostate Cancer: The Role of Agency and Unmitigated Agency
Creators: name: Helgeson, Vicki
name: Lepore, Stephen J
Publisher: name: Carnegie Mellon University
Year: 2004
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology

description: The relations of agency (positive focus on self) and unmitigated agency (focus on self to the exclusion of others) to men's quality of life following prostate cancer was examined. Whereas agency was associated with indicators of a good quality of life, unmitigated agency was associated with indicators of a poor quality of life, particularly more intrusive thoughts about the illness, more depressive symptoms, and worse mental functioning over time. The primary psychological mechanism that explained these relations was reduced self-efficacy. Unmitigated agency was associated with feeling less capable of controlling the demands the illness imposed. Unmitigated agency also was associated with adverse changes in bowel and urine function; and changes in bowel and urine function explained the relation of unmitigated agency to poor quality of life.
Microscopic Calculation of IBM Parameters by Potential Energy Surface Mapping
Creators: name: Bentley, I.
name: Frauendorf, S.
Publisher: name: arXiv
Year: 2011
Subjects: subject: Nuclear Theory (nucl-th)
subject: Nuclear Experiment (nucl-ex)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: A coherent state technique is used to generate an Interacting Boson Model (IBM) Hamiltonian energy surface that simulates a mean field energy surface. The method presented here has some significant advantages over previous work. Specifically, that this can be a completely predictive requiring no a priori knowledge of the IBM parameters. The technique allows for the prediction of the low lying energy spectra and electromagnetic transition rates which are of astrophysical interest. Results and comparison with experiment are included for krypton, molybdenum, palladium, cadmium, gadolinium, dysprosium and erbium nuclei.
description: 12 pages, 11 figures, 4 tables
Comorbid CAD and Ventricular Hypertrophy Compromise The Perfusion of Myocardial Tissue at Subcritical Stenosis of Epicardial Coronaries
Creators: name: Abbas, Eslam
Publisher: name: arXiv
Year: 2018
Subjects: subject: Quantitative Methods (q-bio.QM)
subject: FOS: Biological sciences

description: BACKGROUND: Most studies of CAD revascularization have been based on and reported according to angiographic criteria which don't consider the relation between the resulting effective flow distal to the stenosis and the demand of a hypertrophied myocardial tissue. MODEL: Mathematical model of the myocardial perfusion in comorbid CAD and ventricular hypertrophy using Poiseuille's law. The analysis yields that the curve, which represents the relation between the perfusion and the severity of CAD depending on angiographic and/or angiophysiologic criteria, is shifted to the right by the effect of myocardial tissue hypertrophy. The right shift of said curve, which is directly proportional to the degree of ventricular hypertrophy, indicates that the perfusion of the corresponding myocardial tissue is compromised at angiographically and/or angiophysiologically subsignificant stenosis of the supplying epicardial vessel. RESULTS: Patients with comorbid CAD and left ventricular hypertrophy are more sensitive to CAD-related hemodynamic changes. They are more prone to develop ischemic complications, than their peers with isolated CAD regarding the same degree of coronary stenosis. CONCLUSION: Patients with comorbid CAD and ventricular hypertrophy suffer from myocardial hypoperfusion at angiographically and/or angiophysiologically subcritical epicardial stenosis. Accordingly; the comorbidity of both diseases should be considered upon designing of the treatment regime.
description: 10 pages and 2 figures
พัฒนาการและความเปลี่ยนแปลงในการนำเสนอวัฒนธรรมความเป็นจีนผ่านแบบเรียนภาษาจีนสำหรับผู้เรียนชาวต่างชาติ
Creators: name: สยุมพร ฉันทสิทธิพร
Publisher: name: คณะศิลปศาสตร์ มหาวิทยาลัยธรรมศาสตร์
Year: 2020
Subjects: แบบเรียน
ภาษาจีน
สังคม
วัฒนธรรม
อำนาจอ่อน

description: วารสารศิลปศาสตร์ มหาวิทยาลัยธรรมศาสตร์, 20, 1, 68-96
Additional file 3 of Genomics and transcriptomics yields a system-level view of the biology of the pathogen Naegleria fowleri
Creators: name: Herman, Emily K.
name: Greninger, Alex
name: van der Giezen, Mark
name: Ginger, Michael L.
name: Ramirez-Macias, Inmaculada
name: Miller, Haylea C.
name: Morgan, Matthew J.
name: Tsaousis, Anastasios D.
name: Velle, Katrina
name: Vargová, Romana
name: Záhonová, Kristína
name: Najle, Sebastian Rodrigo
name: MacIntyre, Georgina
name: Muller, Norbert
name: Wittwer, Mattias
name: Zysset-Burri, Denise C.
name: Eliáš, Marek
name: Slamovits, Claudio H.
name: Weirauch, Matthew T.
name: Fritz-Laylin, Lillian
name: Marciano-Cabral, Francine
name: Puzon, Geoffrey J.
name: Walsh, Tom
name: Chiu, Charles
name: Dacks, Joel B.
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 3. Figures S1-S10.
Fissurina undefined-h
Creators: name: Margerel, Jean-Pierre
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Chromista
Foraminifera
Nodosariata
Polymorphinida
Ellipsolagenidae
Fissurina
Fissurina undefined-H

description: Fissurina sp. H (Fig. 8L)
LOCALITÉ. — Thenay (le Piziou). MATÉRIEL EXAMINÉ. — Échantillon TP 832 (référence UP-coll. JPM 488).
DESCRIPTION
Test hyalin à contour ovale, aplati, à bord arrondi, un sillon large et déprimé entourant une partie centrale convexe. Paroi lisse.
description: Published as part of Margerel, Jean-Pierre, 2009, Les foraminifères benthiques des Faluns du Miocène moyen du Blésois (Loir-et-Cher) et de Mirebeau (Vienne) dans le Centre-Ouest de la France, pp. 577-621 in Geodiversitas 31 (3) on page 591, DOI: 10.5252/g2009n3a5, http://zenodo.org/record/10111294
The impracticalities of multiplicatively-closed codon models: a retreat to linear alternatives
Creators: name: Shore, Julia A.
name: Sumner, Jeremy G.
name: Holland, Barbara R.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Populations and Evolution (q-bio.PE)
subject: Rings and Algebras (math.RA)
subject: Statistics Theory (math.ST)
subject: FOS: Biological sciences
subject: FOS: Mathematics

description: A matrix Lie algebra is a linear space of matrices closed under the operation $ [A, B] = AB-BA $. The "Lie closure" of a set of matrices is the smallest matrix Lie algebra which contains the set. In the context of Markov chain theory, if a set of rate matrices form a Lie algebra, their corresponding Markov matrices are closed under matrix multiplication; this has been found to be a useful property in phylogenetics. Inspired by previous research involving Lie closures of DNA models, it was hypothesised that finding the Lie closure of a codon model could help to solve the problem of mis-estimation of the non-synonymous/synonymous rate ratio, $ ω$. We propose two different methods of finding a linear space from a model: the first is the \emph{linear closure} which is the smallest linear space which contains the model, and the second is the \emph{linear version} which changes multiplicative constraints in the model to additive ones. For each of these linear spaces we then find the Lie closures of them. Under both methods, it was found that closed codon models would require thousands of parameters, and that any partial solution to this problem that was of a reasonable size violated stochasticity. Investigation of toy models indicated that finding the Lie closure of matrix linear spaces which deviated only slightly from a simple model resulted in a Lie closure that was close to having the maximum number of parameters possible. Given that Lie closures are not practical, we propose further consideration of the two variants of linearly closed models.
Model Checking Synchronized Products of Infinite Transition Systems
Creators: name: Wöhrle, Stefan
name: Thomas, Wolfgang
Publisher: name: arXiv
Year: 2007
Subjects: subject: Logic in Computer Science (cs.LO)
subject: FOS: Computer and information sciences
subject: F.4.1

description: Formal verification using the model checking paradigm has to deal with two aspects: The system models are structured, often as products of components, and the specification logic has to be expressive enough to allow the formalization of reachability properties. The present paper is a study on what can be achieved for infinite transition systems under these premises. As models we consider products of infinite transition systems with different synchronization constraints. We introduce finitely synchronized transition systems, i.e. product systems which contain only finitely many (parameterized) synchronized transitions, and show that the decidability of FO(R), first-order logic extended by reachability predicates, of the product system can be reduced to the decidability of FO(R) of the components. This result is optimal in the following sense: (1) If we allow semifinite synchronization, i.e. just in one component infinitely many transitions are synchronized, the FO(R)-theory of the product system is in general undecidable. (2) We cannot extend the expressive power of the logic under consideration. Already a weak extension of first-order logic with transitive closure, where we restrict the transitive closure operators to arity one and nesting depth two, is undecidable for an asynchronous (and hence finitely synchronized) product, namely for the infinite grid.
description: 18 pages
Putting Phonetic Context Effects into Context: A Commentary on Fowler (2006)
Creators: name: Lotto, Andrew J.
name: Holt, Lori
Publisher: name: Carnegie Mellon University
Year: 2006
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology

description: On the basis of a review of the literature and three new experiments, Fowler (2006) concludes that a contrast account for phonetic context effects is not tenable and is inferior to a gestural account. We believe that this conclusion is premature and that it is based on a restricted set of assumptions about a general perceptual account. Here, we briefly address the criticisms of Fowler (2006), with the intent of clarifying what a general auditory and learning approach to speech perception entails.
Additional file 4 of Genomics and transcriptomics yields a system-level view of the biology of the pathogen Naegleria fowleri
Creators: name: Herman, Emily K.
name: Greninger, Alex
name: van der Giezen, Mark
name: Ginger, Michael L.
name: Ramirez-Macias, Inmaculada
name: Miller, Haylea C.
name: Morgan, Matthew J.
name: Tsaousis, Anastasios D.
name: Velle, Katrina
name: Vargová, Romana
name: Záhonová, Kristína
name: Najle, Sebastian Rodrigo
name: MacIntyre, Georgina
name: Muller, Norbert
name: Wittwer, Mattias
name: Zysset-Burri, Denise C.
name: Eliáš, Marek
name: Slamovits, Claudio H.
name: Weirauch, Matthew T.
name: Fritz-Laylin, Lillian
name: Marciano-Cabral, Francine
name: Puzon, Geoffrey J.
name: Walsh, Tom
name: Chiu, Charles
name: Dacks, Joel B.
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 4: Supplementary Material 1. Transcription factor identification. Supplementary Material 2. Sterol metabolism genes from Naegleria fowleri. Supplementary Material 3. Analysis of the cytoskeletal protein complement in N. fowleri. Supplementary Material 4. Ras superfamily GTPases in Naegleria spp.
Dynamical implications of gluonic excitations in meson-meson systems
Creators: name: Akbar, Nosheen
name: Masud, Bilal
Publisher: name: arXiv
Year: 2011
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We study meson-meson interactions using an extended $q^2\bar{q}^2(g)$ basis that allows calculating coupling of an ordinary meson-meson system to a hybrid-hybrid one. We use a potential model matrix in this extended basis which at quark level is known to provide a good fit to numerical simulations of a $q^2\bar{q}^2$ system in pure gluonic theory for static quarks in a selection of geometries. We use a combination of resonating group method formalism and Born approximation to include the quark motion using wave functions of a $q\bar{q}$ potential within a cluster. This potential is taken to be quadratic for ground states and has an additional smeared $\frac{1}{r}$ (Gaussian) for the matrix elements between hybrid mesons. For the parameters of this potential, we use values chosen to 1) minimize the error resulting from our use of a quadratic potential and 2) best fit the lattice data for differences of $Σ_{g}$ and $Π_{u}$ configurations of the gluonic field between a quark and an antiquark. At the quark (static) level, including the gluonic excitations was noted to partially replace the need for introducing many-body terms in a multi-quark potential. We study how successful such a replacement is at the (dynamical) hadronic level of relevance to actual hard experiments. Thus we study effects of both gluonic excitations and many-body terms on mesonic transition amplitudes and the energy shifts resulting from the second order perturbation theory (i.e. from the respective hadron loops). The study suggests introducing both energy and orbital excitations in wave functions of scalar mesons that are modelled as meson-meson molecules or are supposed to have a meson-meson component in their wave functions.
description: 26 pages, 10 figures
Putting phonetic context effects into context: A commentary on Fowler (2006)
Creators: name: A J Lotto
name: Holt, Lori
Publisher: name: Carnegie Mellon University
Year: 2006
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology

description: On the basis of a review of the literature and three new experiments, Fowler (2006) concludes that a contrast account for phonetic context effects is not tenable and is inferior to a gestural account. We believe that this conclusion is premature and that it is based on a restricted set of assumptions about a general perceptual account. Here, we briefly address the criticisms of Fowler (2006), with the intent of clarifying what a general auditory and learning approach to speech perception entails.
Enriched categories of correspondences and characteristic classes of singular varieties
Creators: name: Yokura, Shoji
Publisher: name: arXiv
Year: 2018
Subjects: subject: Algebraic Geometry (math.AG)
subject: Algebraic Topology (math.AT)
subject: Category Theory (math.CT)
subject: FOS: Mathematics

description: For the category $\mathscr V$ of complex algebraic varieties, the Grothendieck group of the commutative monoid of the isomorphism classes of correspondences $X \xleftarrow f M \xrightarrow g Y$ with proper morphism $f$ and smooth morphism $g$ (such a correspondence is called \emph{a proper-smooth correspondence}) gives rise to an enriched category $\mathscr Corr(\mathscr V)^+_{pro-sm}$ of proper-smooth correspondences. In this paper we extend the well-known theories of characteristic classes of singular varieties such as Baum-Fulton-MacPherson's Riemann-Roch (abbr. BFM-RR) and MacPherson's Chern class transformation and so on to this enriched category $\mathscr Corr(\mathscr V)^+_{pro-sm}$. In order to deal with local complete intersection (abbr. $\ell.c.i.$) morphism instead of smooth morphism, in a similar manner we consider an enriched category $\mathscr Zigzag(\mathscr V)^+_{pro-\ell.c.i.}$ of \emph{proper-$\ell.c.i.$} zigzags and extend BFM-RR to this enriched category $\mathscr Zigzag(\mathscr V)^+_{pro-\ell.c.i.}$. We also consider an enriched category $\mathscr M_{*,*}(\mathscr V)^+_{\otimes}$ of proper-smooth correspondences $(X \xleftarrow f M \xrightarrow g Y; E)$ equipped with complex vector bundle $E$ on $M$ (such a correspondence is called \emph{a cobordism bicycle of vector bundle}) and we extend BFM-RR to this enriched category $\mathscr M_{*,*}(\mathscr V)^+_{\otimes}$ as well.
description: 35 pages, comments are welcome; to appear in Fundamenta Mathematicae
Pure Alexia: A Nonspatial Visual Disorder Affecting Letter Activation
Creators: name: Behrmann, Marlene
name: Shallice, Tim
Publisher: name: Carnegie Mellon University
Year: 1995
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology

description: Several different interpretations have been offered to explain the mechanism giving rise to the linear relationship between word length and reading time shown by patients with pure alexia or letter-by-letter reading. One interpretation attributes this word length effect to a spatial impairment in which there is a left-right gradient of processing efficiency. This fundamental resource limitation requires that the patient focus on each letter in turn to increase its signal-to-noise ratio and discriminability, especially for letters towards the end of the string. An alternative view attributes the word length effect to a letter activation deficit that disrupts the rapid and efficient processing of single letters. In this paper, we examine these two hypotheses in relation to DS, a letter-by-letter reader. DS is able to distribute her attention to multiple locations in parallel and her performance is unaffected by the absolute or relative spatial location of the letters in a string. She is, however, impaired at reporting the identity of a letter independent of its spatial location and requires an abnormally long time to process each letter. Furthermore, investigations of DS's reading, using Howard's (1991) analyses of reaction time distributions, suggest that she processes each letter in a sequential order. Based on the results of these studies, we propose that prototypic pure alexia is a nonspatial visual disorder that affects the activation of individual letters.
Random walks in random hypergeometric environment
Creators: name: Orenshtein, Tal
name: Sabot, Christophe
Publisher: name: arXiv
Year: 2018
Subjects: subject: Probability (math.PR)
subject: FOS: Mathematics

description: We consider one-dependent random walks on $\mathbb{Z}^d$ in random hypergeometric environment for $d\ge 3$. These are memory-one walks in a large class of environments parameterized by positive weights on directed edges and on pairs of directed edges which includes the class of Dirichlet environments as a special case. We show that the walk is a.s. transient for any choice of the parameters, and moreover that the return time has some finite positive moment. We then give a characterization for the existence of an invariant measure for the process from the point of view of the walker which is absolutely continuous with respect to the initial distribution on the environment in terms of a function $κ$ of the initial weights. These results generalize [Sab11] and [Sab13] on random walks in Dirichlet environment. It turns out that $κ$ coincides with the corresponding parameter in the Dirichlet case, and so in particular the existence of such invariant measures is independent of the weights on pairs of directed edges, and determined solely by the weights on directed edges.
description: 23 pages
Additional file 1 of Access to systemic anti-cancer therapies for women with secondary breast cancer—protocol for a mixed methods systematic review
Creators: name: Pearson, Sally Anne
name: Taylor, Sally
name: Marsden, Antonia
name: Yorke, Janelle
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1. Updated PRISMA-P checklist.
Pure alexia and covert reading: Evidence from Stroop tasks
Creators: name: McKeeff, Thomas J.
name: Behrmann, Marlene
Publisher: name: Carnegie Mellon University
Year: 2004
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology

description: Patients with pure alexia (also referred to as letter-by-letter readers) show a marked word-length effect when naming visually presented words, evidenced by a monotonic increase in response time (or decrease in accuracy) as a function of the number of letters in the string. Interestingly, despite the difficulty in overtly reporting the identity of some words, many patients exhibit fast and above-chance access to lexical and/or semantic information for the same words. To explore the extent of this covert reading, we examined the degree of interference afforded by the inconsistent (word identity and colour label do not match) versus neutral condition in a Stroop task in a pure alexic patient, EL. EL shows evidence of covert reading on a semantic categorisation task and a lexical decision task. She also demonstrates covert reading by exhibiting Stroop interference of the same magnitude as a matched control subject, when naming the colour of the ink in which a word is printed. When the word shares some but not all letters with the colour name (BLOW instead of BLUE), neither subject shows interference. In contrast with the control subject, EL does not show Stroop interference when various orthographic changes (degraded visual input, cursive font) or phonological or semantic changes are made to the word. These findings indicate that although some implicit processing of words may be possible, this processing is rather rudimentary. Not surprising, this implicit activation may be insufficient to support overt word identification. We explain these findings in the context of a single, integrated account of pure alexia.
Additional file 2 of Access to systemic anti-cancer therapies for women with secondary breast cancer—protocol for a mixed methods systematic review
Creators: name: Pearson, Sally Anne
name: Taylor, Sally
name: Marsden, Antonia
name: Yorke, Janelle
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 2. Example MEDLINE search strategy.
DOOCS - A Control System Also For Detectors
Creators: name: Schäfer, Oliver
Publisher: name: Deutsches Elektronen-Synchrotron, DESY, Hamburg
Year: 2019

description: 5th Annual MT Meeting, Jena, Germany, 5 Mar 2019 - 7 Mar 2019
description: The distributed Object Oriented Control System, DOOCS, has been developed at DESY for the operation of particle accelerators. Our group has been using it since 2007 to steer and monitor prototype experiments with a gas-based particle detector at the DESY Test Beam Facility. Due to the many different control- and monitoring tasks, a variety of solutions has been developed and will be presented on the poster.
Systematic Model Building Based on Quark-Lepton Complementarity Assumptions
Creators: name: Winter, Walter
Publisher: name: arXiv
Year: 2007
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: In this talk, we present a procedure to systematically generate a large number of valid mass matrix textures from very generic assumptions. Compared to plain anarchy arguments, we postulate some structure for the theory, such as a possible connection between quarks and leptons, and a mechanism to generate flavor structure. We illustrate how this parameter space can be used to test the exclusion power of future experiments, and we point out that one can systematically generate embeddings in Z_N product flavor symmetry groups.
description: 3 pages, 1 figure. Talk given at the NuFact 07 conference, Aug 6-11, 2007, Okayama, Japan
Did William Shakespeare and Thomas Kyd Write Edward III?
Creators: name: Kernot, David
name: Bossomaier, Terry
name: Bradbury, Roger
Publisher: name: arXiv
Year: 2018
Subjects: subject: Computation and Language (cs.CL)
subject: FOS: Computer and information sciences

description: William Shakespeare is believed to be a significant author in the anonymous play, The Reign of King Edward III, published in 1596. However, recently, Thomas Kyd, has been suggested as the primary author. Using a neurolinguistics approach to authorship identification we use a four-feature technique, RPAS, to convert the 19 scenes in Edward III into a multi-dimensional vector. Three complementary analytical techniques are applied to cluster the data and reduce single technique bias before an alternate method, seriation, is used to measure the distances between clusters and test the strength of the connections. We find the multivariate techniques robust and are able to allocate up to 14 scenes to Thomas Kyd, and further question if scenes long believed to be Shakespeare's are not his.
description: 13 pages, 5 Figures, 3 Tables
Fissurina undefined-i
Creators: name: Margerel, Jean-Pierre
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Chromista
Foraminifera
Nodosariata
Polymorphinida
Ellipsolagenidae
Fissurina
Fissurina undefined-I

description: Fissurina sp. I (Fig. 8 M-O)
LOCALITÉ. — Thenay (le Piziou).
MATÉRIEL EXAMINÉ. —Échantillon TP 832 (référence UP-coll. JPM 489).
DESCRIPTION
Test hyalin à contour ovale, allongé, à section biconvexe.
Ouverture en fente et tube entosolénien accolé à une paroi.
description: Published as part of Margerel, Jean-Pierre, 2009, Les foraminifères benthiques des Faluns du Miocène moyen du Blésois (Loir-et-Cher) et de Mirebeau (Vienne) dans le Centre-Ouest de la France, pp. 577-621 in Geodiversitas 31 (3) on page 591, DOI: 10.5252/g2009n3a5, http://zenodo.org/record/10111294
Pure Alexia
Creators: name: Montant, Marie
name: Behrmann, Marlene
Publisher: name: Carnegie Mellon University
Year: 2000
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology

description: Pure alexia is a reading disorder that occurs in literate individuals secondary to a lesion in the left occipito-temporal region.
Completeness of Bethe Ansatz by Sklyanin SOV for Cyclic Representations of Integrable Quantum Models
Creators: name: Niccoli, G.
Publisher: name: arXiv
Year: 2011
Subjects: subject: Mathematical Physics (math-ph)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: In [1] an integrable quantum model was introduced and a class of its cyclic representations was proven to define lattice regularizations of the Sine-Gordon model. Here, we analyze general cyclic representations of this integrable quantum model by extending the spectrum construction introduced in [2] in the framework of the Separation of Variables (SOV) of Sklyanin. We show that as in [1] also for general representations, the transfer matrix spectrum (eigenvalues and eigenstates) is completely characterized in terms of polynomial solutions of an associated functional Baxter equation. Moreover, we prove that the method here developed has two fundamental built-in features: i) the completeness of the set of the transfer matrix eigenstates constructed from the solutions of the associated Bethe ansatz equations, ii) the existence and complete characterization of the Baxter Q-operator.
description: 38 pages, two references added, minor modifications