cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
A Numerical Study of Sub-Millisecond Integrated Mix-and-Inject Microﬂuidic Devices for Sample Delivery at Synchrotron and XFELs
Creators: name: Hejazian, Majid
name: Balaur, Eugeniu
name: Abbey, Brian
Publisher: name: La Trobe
Year: 2021
Subjects: Uncategorized

description: Microfluidic devices which integrate both rapid mixing and liquid jetting for sample delivery are an emerging solution for studying molecular dynamics via X-ray diffraction. Here we use finite element modelling to investigate the efficiency and time-resolution achievable using microfluidic mixers within the parameter range required for producing stable liquid jets. Three-dimensional simulations, validated by experimental data, are used to determine the velocity and concentration distribution within these devices. The results show that by adopting a serpentine geometry, it is possible to induce chaotic mixing, which effectively reduces the time required to achieve a homogeneous mixture for sample delivery. Further, we investigate the effect of flow rate and the mixer microchannel size on the mixing efficiency and minimum time required for complete mixing of the two solutions whilst maintaining a stable jet. In general, we find that the smaller the cross-sectional area of the mixer microchannel, the shorter the time needed to achieve homogeneous mixing for a given flow rate. The results of these simulations will form the basis for optimised designs enabling the study of molecular dynamics occurring on millisecond timescales using integrated mix-and-inject microfluidic devices.
Additional file 10 of Adipose tissue-derived human mesenchymal stromal cells can better suppress complement lysis, engraft and inhibit acute graft-versus-host disease in mice
Creators: name: Wu, Stanley Chun Ming
name: Zhu, Manyu
name: Chik, Stanley C. C.
name: Kwok, Maxwell
name: Javed, Asif
name: Law, Laalaa
name: Chan, Shing
name: Boheler, Kenneth R.
name: Liu, Yin Ping
name: Chan, Godfrey Chi Fung
name: Poon, Ellen Ngar-Yun
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 10: Table S5. List of Differentially expressed genes between UC-hMSCsand BM-hMSCs. Log2 FoldChange > 1 or < − 1, p-value < 0.05.
Appendix_revised – Supplemental material for Interest Group and Political Party Influence on Growth in State Spending and Debt
Creators: name: Holyoke, Thomas T.
name: Cummins, Jeff
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 160607 International Relations
subject: FOS: Political science

description: Supplemental material, Appendix_revised for Interest Group and Political Party Influence on Growth in State Spending and Debt by Thomas T. Holyoke and Jeff Cummins in American Politics Research
Towards Developing a Framework to Analyze the Qualities of the University Websites
Creators: name: Rashida, Maliha
name: Kawsarul Islam
name: A S M Kayes
name: Hammoudeh, Mohammad
name: Arefin, Mohammad Shamsul
name: Habib, Mohammad Ashfak
Publisher: name: La Trobe
Year: 2021
Subjects: Uncategorized

description: The website of a university is considered to be a virtual gateway to provide primary resources to its stakeholders. It can play an indispensable role in disseminating information about a university to a variety of audience at a time. Thus, the quality of an academic website requires special attention to fulfil the users’ need. This paper presents a multi-method approach of quality assessment of the academic websites, in the context of universities of Bangladesh. We developed an automated web-based tool that can evaluate any academic website based on three criteria, which are as follows: content of information, loading time and overall performance. Content of information contains many sub criteria, such as university vision and mission, faculty information, notice board and so on. This tool can also perform comparative analysis among several academic websites and generate a ranked list of these. To the best of our knowledge, this is the very first initiative to develop an automated tool for accessing academic website quality in context of Bangladesh. Beside this, we have conducted a questionnaire-based statistical evaluation among several universities to obtain the respective users’ feedback about their academic websites. Then, a ranked list is generated based on the survey result that is almost similar to the ranked list got from the University ranking systems. This validates the effectiveness of our developed tool in accessing academic website.
Supplement_2_-_Educational_Module_Key_Topics – Supplemental material for Assessment of Tracheostomy and Laryngectomy Knowledge among Non-Otolaryngology Physicians
Creators: name: Tsung-Yen Hsieh
name: Timbang, Leah
name: Kuhn, Maggie
name: Brodie, Hilary
name: Squires, Lane
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 110315 Otorhinolaryngology
subject: FOS: Clinical medicine

description: Supplemental material, Supplement_2_-_Educational_Module_Key_Topics for Assessment of Tracheostomy and Laryngectomy Knowledge among Non-Otolaryngology Physicians by Tsung-yen Hsieh, Leah Timbang, Maggie Kuhn, Hilary Brodie and Lane Squires in Annals of Otology, Rhinology & Laryngology
OBM872880 Supplementary Figure and Table - Supplemental material for Navigating severe maternal morbidity using big data: Green, yellow, and red flags for researchers
Creators: name: Davidson, Alexander JF
name: Park, Alison L
name: Ray, Joel G
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 111402 Obstetrics and Gynaecology
subject: FOS: Clinical medicine

description: Supplemental material, OBM872880 Supplementary Figure and Table for Navigating severe maternal morbidity using big data: Green, yellow, and red flags for researchers by Alexander JF Davidson, Alison L Park and Joel G Ray in Obstetric Medicine
Additional file 11 of Adipose tissue-derived human mesenchymal stromal cells can better suppress complement lysis, engraft and inhibit acute graft-versus-host disease in mice
Creators: name: Wu, Stanley Chun Ming
name: Zhu, Manyu
name: Chik, Stanley C. C.
name: Kwok, Maxwell
name: Javed, Asif
name: Law, Laalaa
name: Chan, Shing
name: Boheler, Kenneth R.
name: Liu, Yin Ping
name: Chan, Godfrey Chi Fung
name: Poon, Ellen Ngar-Yun
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 11: Table S6. List of Differentially expressed genes between AT-hMSCs and UC-hMSCs. Log2 FoldChange > 1 or < − 1, p-value < 0.05.
อุปัชฌายวัตร-สัทธิวิหาริกวัตร : แนวคิดและหลักการปฏิบัติเพื่อความสามัคคีในสังคมสงฆ์
Creators: name: พระมหาวิรัตน์ อาจารสุโภ
Publisher: name: Buddhapanyasridvaravadi Buddhist College
Year: 2016
Subjects: Upajjhayavatta, Saddhiviharikavatta, Unity among Buddhist monks

description: Journal of MCU Buddhapanya Review, 1, 2
Oligomer and Polymer: Self Assembly of [Cp*Fe(η5‐P5)] and Ag(I) Salts of Bulky Weakly Coordinating Anions
Creators: name: Mondal, Bijan
name: Riesinger, Christoph
name: Fleischmann, Martin
name: Scheer, Manfred
Publisher: name: Universität Regensburg
Year: 2024
Subjects: subject: coordination polymer • phosphorus • silver • weakly * coordinating anion
subject: 540 Chemie

description: Reactions between the five-fold symmetric building block [Cp*Fe(η5-P5)] (A) and Ag(I) salts containing bulky weakly coordinating anions [TEF] and [FAL] ([TEF] = [Al{OC(CF3)3}4]–, [FAl] = [FAl{OC6F10(C6F5)}3]–) are presented. While, in the presence of Ag[TEF], A leads to the formation of a hitherto condensed 1D coordination polymer [{Ag( η 2 : η 1 -A)2}]n[TEF]n (1), a new finite tetranuclear Ag(I) complex [{Ag4( η 1 -A)2( η 2 : η 1 -A)4( η 1 : η 1 -A)2}][FAL]4 (3) was obtained with an Ag(I) salt bearing the weakly coordinating anion [FAl] increased in size . Various coordination modes ( η2: η1; η1: η1 and η1) of A were observed in the solid-state structure of 3, reflecting the adaptive coordination behavior of A towards Ag(I) ions. Structural modifications of the 1D polymer (1) can be controlled by the addition of a trace amount of MeCN yielding the unwound heteroleptic 1D polymer [{Ag(MeCN)2}3( η 1 : η 1 : η 1 -A)2]n[TEF]3n (2) . Moreover, in the presence of MeCN, the finite oligomeric compound 3 can also be converted into a new heteroleptic 1D polymer [{Ag(MeCN)}4( η 1 : η 1 -A)5( η 2 : η 1 -A)2]n[FAL]4n (4).
Additional file 7 of Adipose tissue-derived human mesenchymal stromal cells can better suppress complement lysis, engraft and inhibit acute graft-versus-host disease in mice
Creators: name: Wu, Stanley Chun Ming
name: Zhu, Manyu
name: Chik, Stanley C. C.
name: Kwok, Maxwell
name: Javed, Asif
name: Law, Laalaa
name: Chan, Shing
name: Boheler, Kenneth R.
name: Liu, Yin Ping
name: Chan, Godfrey Chi Fung
name: Poon, Ellen Ngar-Yun
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 7: Fig. S3. A Fluorescence imaging of tissues 21 days after transplantation. Immunofluorescence images of the lung and liver, spleen and colon at 21 days after transplanting CM-Dil labeled hMSCs into mice. B Human specific GAPDH mRNA expression of mice liver and colon at day 21 compared with mouse GAPDH. Graphs show data of three experiments with mean +/− SEM. *p < 0.05, **p < 0.01.
Multiple country approach to improve the test-day prediction of dairy cows’ dry matter intake
Creators: name: Tedde, A
name: Grelet, C
name: Ho, PN
name: Pryce, Jennie
name: Hailemariam, D
name: Wang, Z
name: Plastow, G
name: Gengler, N
name: Froidmont, E
name: Dehareng, F
name: Bertozzi, C
name: Crowe, MA
name: Soyeurt, H
Publisher: name: La Trobe
Year: 2021
Subjects: Uncategorized

description: We predicted dry matter intake of dairy cows using parity, week of lactation, milk yield, milk mid-infrared (MIR) spectrum, and MIR-based predictions of bodyweight, fat, protein, lactose, and fatty acids content in milk. The dataset comprised 10,711 samples of 534 dairy cows with a geographical diversity (Australia, Canada, Denmark, and Ireland). We set up partial least square (PLS) regressions with different constructs and a one-hidden-layer artificial neural network (ANN) using the highest contribution variables. In the ANN, we replaced the spectra with their projections to the 25 first PLS factors explaining 99% of the spectral variability to reduce the model complexity. Cow-independent 10 × 10-fold cross-validation (CV) achieved the best performance with root mean square errors (RMSECV) of 3.27 ± 0.08 kg for the PLS regression and 3.25 ± 0.13 kg for ANN. Although the available data were significantly different, we also performed a country-independent validation (CIV) to measure the models’ performance fairly. We found RMSECIV varying from 3.73 to 6.03 kg for PLS and 3.69 to 5.08 kg for ANN. Ultimately, based on the country-independent validation, we discussed the developed models’ performance with those achieved by the National Research Coun-cil’s equation.
Additional file 8 of Adipose tissue-derived human mesenchymal stromal cells can better suppress complement lysis, engraft and inhibit acute graft-versus-host disease in mice
Creators: name: Wu, Stanley Chun Ming
name: Zhu, Manyu
name: Chik, Stanley C. C.
name: Kwok, Maxwell
name: Javed, Asif
name: Law, Laalaa
name: Chan, Shing
name: Boheler, Kenneth R.
name: Liu, Yin Ping
name: Chan, Godfrey Chi Fung
name: Poon, Ellen Ngar-Yun
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 8: Fig. S4. A Principal component analysis. B Heatmap of sample-sample distancing using Ward’s method. C Number of up and down regulated genes in each comparison. Blue bars indicated the upregulated genes, whereas the orange bars indicated downregulated genes. D, E Volcano plot of AT-hMSCs versus BM-hMSCs and UC-hMSCs versus BM-hMSCs of our dataset.
Getting it straight: Accommodating rectilinear behavior in captive snakes—a review of recommendations and their evidence base
Creators: name: Warwick, C
name: Grant, R
name: Steedman, C
name: Howell, Tiffani
name: Arena, PC
name: Lambiris, AJL
name: Nash, AE
name: Jessop, M
name: Pilny, A
name: Amarello, M
name: Gorzula, S
name: Spain, M
name: Walton, A
name: Nicholas, E
name: Mancera, K
name: Whitehead, M
name: Martínez-Silvestre, A
name: Cadenas, V
name: Whittaker, A
name: Wilson, A
Publisher: name: La Trobe
Year: 2021
Subjects: Uncategorized

description: Snakes are sentient animals and should be subject to the accepted general welfare principles of other species. However, they are also the only vertebrates commonly housed in conditions that prevent them from adopting rectilinear behavior (ability to fully stretch out). To assess the evidence bases for historical and current guidance on snake spatial considerations, we conducted a literature search and review regarding recommendations consistent with or specifying ≥1 × and <1 × snake length enclosure size. We identified 65 publications referring to snake enclosure sizes, which were separated into three categories: peer-reviewed literature (article or chapter appearing in a peer-reviewed journal or book, n = 31), grey literature (government or other report or scientific letter, n = 18), and opaque literature (non-scientifically indexed reports, care sheets, articles, husbandry books, website or other information for which originating source is not based on scientific evidence or where scientific evidence was not provided, n = 16). We found that recommendations suggesting enclosure sizes shorter than the snakes were based entirely on decades-old ‘rule of thumb’ practices that were unsupported by scientific evidence. In contrast, recommendations suggesting enclosure sizes that allowed snakes to fully stretch utilized scientific evidence and considerations of animal welfare. Providing snakes with enclosures that enable them to fully stretch does not suggest that so doing allows adequate space for all necessary normal and important considerations. However, such enclosures are vital to allow for a limited number of essential welfare-associated behaviors, of which rectilinear posturing is one, making them absolute minimum facilities even for short-term housing.
ENHANCEMENT OF THE REMOVAL OF CADMIUM IN SOME WATERS RESOURCES BY 2,5-HEXANEDIONE BIS(SALICYLOYLHYDRAZONE) USING FLOATION TECHNIQUE
Creators: name: Jeragh, Bakir
name: El-Asmy, Ahmed A.
Publisher: name: European Chemical Bulletin
Year: 2014

description: The removal of Cd(II) has been improved using 2,5-hexanedione bis(salicyloylhydrazone) (HDSH) as complexing agent and oleic acid (HOL) as collector by flotation method. The optimal conditions are: pH [~ 5]; concentrations of Cd(II) [2×10-4 mol L-1], surfactant [1×10-3 mol L 1] and HDSH [1×10-4 molL-1]; ionic strength [different concentration of NaCl, KCl, KNO3, CaCl2 and MgSO4]; temperature [25±2°C] and shaking time [3 min] were optimized. The effects of foreign ions [Na+, K+, Ca2+, Mg2+, Mn2+, Co2+, Ni2+, Cu2+, Zn2+, Hg2+, Al3+, Cl-, SO4--, NO3-, CLO4-, H2PO4- and CH3COO-],on the recoveries of Cd(II) were investigated. The Cd(II) HDSH complex was floated quantitatively (~100%) under the recommended conditions. The proposed determination procedure was satisfactory applied to the analysis of Cd(II) in natural [Nile, Sea, underground and lake] waters. The solid complex formed between HDSH and Cd(II) was characterized to have the formula [Cd2(HDSH-4H)(H2O)4].
description: European Chemical Bulletin, Vol 3, No 3 (2014): European Chemical Bulletin
Additional file 1 of Prognostic value of sarcopenia and inflammatory indices synergy in patients with esophageal squamous cell carcinoma undergoing chemoradiotherapy
Creators: name: Xiao, Ling
name: Liu, Yudi
name: Zhang, Xue
name: Nie, Xinyu
name: Bai, Hansong
name: Lyu, Jiahua
name: Li, Tao
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Science Policy

description: Supplementary Material 1.
Supp_Fig_6 – Supplemental material for Circadian Function in Multiple Cell Types Is Necessary for Proper Timing of the Preovulatory LH Surge
Creators: name: Bittman, Eric L.
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 110306 Endocrinology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Neuroscience

description: Supplemental material, Supp_Fig_6 for Circadian Function in Multiple Cell Types Is Necessary for Proper Timing of the Preovulatory LH Surge by Eric L. Bittman in Journal of Biological Rhythms
SHAPE EVOLUTION OF STRONTIUM CARBONATE ARCHITECTURES USING NATURAL GUMS AS CRYSTAL GROWTH MODIFIERS
Creators: name: Sreedhar, B.
name: Sulochana, M.
name: Vani, Ch. Satya
name: Devi, D. Keerthi
name: Subba Naidu, N. V.
Publisher: name: European Chemical Bulletin
Year: 2014

description: Strontium carbonate architectures assembled from nanorods are successfully synthesized at room temperature and screw capped method at 100 °C. Our experiments show that the protocol followed for the synthesis of SrCO3 as well as the concentration of various gums used, play an important role in the size and morphology of SrCO3. Here in, we obtained aragonite nanorod aggregates with unusual morphologies via transformation of metal carbonates at different conditions using natural gums as additives. A rational mechanism based on the oriented self-assembly of SrCO3 nuclei is proposed for the formed architectures. The crystals undergo an interesting morphology changes and have been well characterized by X-ray diffraction (XRD), Scanning Electron Microscopy (SEM), Transmission Electron Microscopy (TEM), Thermogravimetric analysis (TGA) and Fourier Transform Infrared spectroscopy (FT-IR) techniques. This method is simple, low-cost and environmentally friendly route for the synthesis of SrCO3 architectures with different morphologies.
description: European Chemical Bulletin, Vol 3, No 3 (2014): European Chemical Bulletin
SARS-CoV-2 spike-derived peptides presented by HLA molecules
Creators: name: Nguyen, Andrea
name: Szeto, Christopher
name: Jayasinghe, Dhilshan
name: Lobos, Christian A
name: Halim, Hanim
name: Chatzileontiadou, Dimitra
name: Grant, Emma
name: Gras, Stephanie
Publisher: name: La Trobe
Year: 2022
Subjects: classificationCode: 32
subject: Biomedical and clinical sciences
classificationCode: 3204
subject: Immunology
subject: FOS: Clinical medicine
classificationCode: 3207
subject: Medical microbiology

description: The SARS-CoV-2 virus responsible for the COVID-19 pandemic has caused significant morbidity and mortality worldwide. With the remarkable advances in medical research, vaccines were developed to prime the human immune system and decrease disease severity. Despite these achievements, the fundamental basis of immunity to the SARS-CoV-2 virus is still largely undefined. Here, we solved the crystal structure of three spike-derived peptides presented by three different HLA molecules, and determined the stability of the overall peptide–HLA complexes formed. The peptide presentation of spike-derived peptides can influence the way in which CD8+ T cells can recognise infected cells, clear infection, and therefore, control the outcome of the disease.
Supplementary_file_1 – Supplemental material for Assessment of Nutritional Status in Sri Lankan Children: Validity of Current Anthropometry Cutoffs?
Creators: name: Warnakulasuriya, Loretta S.
name: Fernando, Manel A. M.
name: A. V. Nihal Adikaram
name: A. R. M. Thawfeek
name: W. M. L. Anurasiri
name: R. Elisabet
name: Bergsten, Peter
name: K. D. Renuka Ruchira Silva
name: Dulani L. Samaranayake
name: Vithanage Pujitha Wickramasinghe
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 111799 Public Health and Health Services not elsewhere classified
subject: FOS: Health sciences

description: Supplemental material, Supplementary_file_1 for Assessment of Nutritional Status in Sri Lankan Children: Validity of Current Anthropometry Cutoffs? by Loretta S. Warnakulasuriya, Manel A. M. Fernando, A. V. Nihal Adikaram, A. R. M. Thawfeek, W. M. L. Anurasiri, R. Elisabet, Peter Bergsten, K. D. Renuka Ruchira Silva, Dulani L. Samaranayake and Vithanage Pujitha Wickramasinghe in Asia Pacific Journal of Public Health
THE EFFECT OF pH ON BIOACCUMULATION OF Cd, Hg AND Pb BY WATER HYACINTH
Creators: name: Sjahrul, Muhammad
Publisher: name: European Chemical Bulletin
Year: 2014

description: In the water contaminated by heavy metals such as Cd, Hg, and Pb, water hyacinth grows and multiplies rapidly. From this phenomenon it could be assumed that there may be a close relationship between the characteristics of environmental heavy metal content and water hyacinth growth. The water hyacinth was planted in Long Ashton media at varying pH, concentrations of Cd, Hg, and Pb and planting time. The roots adsorbed more Cd, Hg and Pb than the leaves stalks and leaves. The maximum absorption was found at pH 5.0 and minimum at pH 7.0. The higher the metal concentration in the media and the longer the planting time and the absorption increased considerably. It was concluded that the acidity level of media could be an indicator of the adsorption of Cd, Hg, and Pb metals by the water hyacinth.
description: European Chemical Bulletin, Vol 3, No 3 (2014): European Chemical Bulletin
The financial dimensions of open science implementations in the publication system
Creators: name: Haustein, Stefanie
Publisher: name: Zenodo
Year: 2025
Subjects: subject: open science
subject: Open Access Publishing
subject: publishing market
subject: research assessment reform
subject: science reform

description: Presentation at Robert K. Merton Center of Science Studies Workshop "Let's Talk about Sciene Reform!" at Humboldt University, 12 May 2025, Berlin (Germany)
SARS-CoV-2 spike-derived peptides presented by HLA molecules
Creators: name: Nguyen, Andrea
name: Szeto, Christopher
name: Jayasinghe, Dhilshan
name: Lobos, Christian A
name: Halim, Hanim
name: Chatzileontiadou, Dimitra
name: Grant, Emma
name: Gras, Stephanie
Publisher: name: La Trobe
Year: 2021
Subjects: Uncategorized

description: The SARS-CoV-2 virus responsible for the COVID-19 pandemic has caused significant morbidity and mortality worldwide. With the remarkable advances in medical research, vaccines were developed to prime the human immune system and decrease disease severity. Despite these achievements, the fundamental basis of immunity to the SARS-CoV-2 virus is still largely undefined. Here, we solved the crystal structure of three spike-derived peptides presented by three different HLA molecules, and determined the stability of the overall peptide–HLA complexes formed. The peptide presentation of spike-derived peptides can influence the way in which CD8+ T cells can recognise infected cells, clear infection, and therefore, control the outcome of the disease.
REMOVAL OF FLUORIDE FROM DRINKING WATER BY QUARTERNARY AMINISED RESINS FROM SAW-DUST
Creators: name: Choudhary, Anurag
name: Rao, PTSRK Prasad
name: Sharma, Shobha
name: Sharma, Vinita
Publisher: name: European Chemical Bulletin
Year: 2014

description: Safe drinking water is a severe problem in many parts of the various countries including India a fast developing country. Authors have used some low-cost materials and their products as one of the best adsorbents for the removal of fluoride from water mainly used for drinking and other domestic purposes. Results are appreciable to be applied in large scale purposes.
description: European Chemical Bulletin, Vol 3, No 3 (2014): European Chemical Bulletin
Supplemental Material, Baltz_-_Supplemental_File - Nonprescription Medication Use in Hospice Patients
Creators: name: Baltz, Alan P.
name: Gressler, Laura E.
name: Costantino, Ryan C.
name: McPherson, Mary Lynn
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 111099 Nursing not elsewhere classified
subject: FOS: Health sciences
subject: 111702 Aged Health Care

description: Supplemental Material, Baltz_-_Supplemental_File for Nonprescription Medication Use in Hospice Patients by Alan P. Baltz, Laura E. Gressler, Ryan C. Costantino and Mary Lynn McPherson in American Journal of Hospice and Palliative Medicine®
The metabolic response of brachypodium roots to the interaction with beneficial bacteria is affected by the plant nutritional status
Creators: name: Schillaci, M
name: Kehelpannala, C
name: Martinez-Seidel, F
name: Smith, Penelope
name: Arsova, B
name: Watt, M
name: Roessner, U
Publisher: name: La Trobe
Year: 2021
Subjects: Uncategorized

description: The potential of plant growth promoting (PGP) bacteria in improving the performance of plants in suboptimal environments is increasingly acknowledged, but little information is available on the mechanisms underlying this interaction, particularly when plants are subjected to a combination of stresses. In this study, we investigated the effects of the inoculation with the PGP bacteria Azospirillum brasilense (Azospirillum) on the metabolism of the model cereal Brachypodium distachyon (Brachypodium) grown at low temperatures and supplied with insufficient phosphorus. Investigating polar metabolite and lipid fluctuations during early plant development, we found that the bacteria initially elicited a defense response in Brachypodium roots, while at later stages Azospirillum reduced the stress caused by phosphorus deficiency and improved root development of inoculated plants, particularly by stimulating the growth of branch roots. We propose that the interaction of the plant with Azospirillum was influenced by its nutritional status: bacteria were sensed as pathogens while plants were still phosphorus sufficient, but the interaction became increasingly beneficial for the plants as their phosphorus levels decreased. Our results provide new insights on the dynamics of the cereal-PGP bacteria interaction, and contribute to our understanding of the role of beneficial microorganisms in the growth of cereal crops in suboptimal environments.
OCCURRENCE AND DISTRIBUTION OF STAPHYLOCOCCUS AUREUS AND COLIFORM BACTERIA IN THE INNER GULF OF THAILAND
Creators: name: Buathong, Phawadee
name: Leelaruji, Wannisa
name: Sojisuporn, Pramot
name: Wattayakorn, Gullaya
name: Chulalaksananukul, Warawut
Publisher: name: European Chemical Bulletin
Year: 2014

description: Global warming is a phenomenon that causes many environmental issues, including the frequency of heat waves, severity of storm surges, changes in rain pattern, flooding, and coastal erosion. In Thailand, the worst flooding in 2011 has imposed more impacts to the environment, human life and socioeconomic activities. The exceeding amount of floodwater was drained into the adjoining Gulf of Thailand in order to solve the flooding problem. As a result, the inner Gulf of Thailand was affected by the high volume of floodwater together with pathogenic bacteria such as Staphylococcus aureus and coliform bacteria which are generally used as indicators of a number of other bacteria. The results from this study revealed that total coliforms had higher spread rate toward the west coast of the inner Gulf, while S. aureus was found to be highest at the central part of the inner Gulf of Thailand. In general, the highest abundance of both the examined groups was observed during November 2011 after the high rainfall (flood) event.
description: European Chemical Bulletin, Vol 3, No 3 (2014): European Chemical Bulletin
Design features that reduce the use of seclusion and restraint in mental health facilities: a rapid systematic review
Creators: name: Oostermeijer, Sanne
name: Brasier, Catherine
name: Harvey, Carol
name: Hamilton, Bridget
name: Roper, Cath
name: Martel, Andrew
name: Fletcher, Justine
name: Brophy, Lisa
Publisher: name: La Trobe
Year: 2021
Subjects: Uncategorized

description: Increasing efforts are being made to prevent and/or eliminate the use of seclusion and restraint in mental health facilities. Recent literature recognises the importance of the physical environment in supporting better outcomes in mental health services. This rapid review scoped the existing literature studying what physical design features of mental health facilities can reduce the use of seclusion and physical restraint.DesignA rapid review of peer-reviewed literature.MethodsPeer-reviewed literature was searched for studies on architectural design and the use of restraint and seclusion in mental health facilities. The following academic databases were searched: Cochrane Library, Medline, PsycINFO, Scopus and Avery for English language literature published between January 2010 and August 2019. The Joanna Briggs Institute’s critical appraisal tool was used to assess the quality of included studies.ResultsWe identified 35 peer-reviewed studies. The findings revealed several overarching themes in design efforts to reduce the use of seclusion and restraint: a beneficial physical environment (eg, access to gardens or recreational facilities); sensory or comfort rooms; and private, uncrowded and calm spaces. The critical appraisal indicated that the overall quality of studies was low, as such the findings should be interpreted with caution.ConclusionThis study found preliminary evidence that the physical environment has a role in supporting the reduction in the use of seclusion and restraint. This is likely to be achieved through a multilayered approach, founded on good design features and building towards specific design features which may reduce occurrences of seclusion and restraint. Future designs should include consumers in a codesign process to maximise the potential for change and innovation that is genuinely guided by the insights of lived experience expertise.
Additional file 1 of Timing of endoscopy in patients with cirrhosis and acute variceal bleeding: a single-center retrospective study
Creators: name: Peng, Mengyuan
name: Bai, Zhaohui
name: Zou, Deli
name: Xu, Shixue
name: Wang, Chunmei
name: Başaranoğlu, Metin
name: Philips, Cyriac Abby
name: Guo, Xiaozhong
name: Shao, Xiaodong
name: Qi, Xingshun
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Virology

description: Supplementary Material 1
title: Panel Arbeitsmarkt und Soziale Sicherung PASS-Erhebungswelle 15/2021 (Haupterhebung)
Creators: name: Jesske, Birgit
name: Schulz, Sabine
name: Gerber, Vincent
Publisher: name: Forschungsdatenzentrum der Bundesagentur für Arbeit (BA) im Institut für Arbeitsmarkt- und Berufsforschung (IAB)
Year: 2022

description: Vor dem Hintergrund der besonderen Zusammensetzung der Personen mit SGB-II-Bezug werden im PASS alle Nationalitäten berücksichtigt und auch fremdsprachige Befragungen durchgeführt. Zu Beginn waren die Erhebungssprachen auf Russisch und Türkisch begrenzt. Mit der in Deutschland verstärkten Flüchtlingszuwanderung seit 2014 werden seit der Erhebungswelle 10 im PASS Haushalte und Personen auf Arabisch befragt. Für die Gruppe syrischer und irakischer Haushalte wurde in einigen Wellen zudem ein Oversampling vorgenommen. Die gesonderte Bereitstellung eines türkischsprachigen Erhebungsinstruments wurde mit der Welle 10 eingestellt, da Befragungen in türkischer Sprache in den Haushalten nur noch in sehr wenigen Fällen notwendig waren.
description: FDZ-Methodenreport
Evaluating adaptiveness of an active back exosuit for dynamic lifting and maximum range of motion
Creators: name: Quirk, D. Adam
name: Chung, Jinwon
name: Applegate, Megan
name: Cherin, Jason M.
name: Dalton, Diane M.
name: Awad, Lou N.
name: Walsh, Conor J.
Publisher: name: Taylor & Francis
Year: 2023
Subjects: Biotechnology
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Information Systems not elsewhere classified

description: Back exosuits deliver mechanical assistance to reduce the risk of back injury, however, minimising restriction is critical for adoption. We developed the adaptive impedance controller to minimise restriction while maintaining assistance by modulating impedance based on the user’s movement direction and nonlinear sine curves. The objective of this study was to compare active assistance, delivered by a back exosuit via our adaptive impedance controller, to three levels of assistance from passive elastics. Fifteen participants completed five experimental blocks (4 exosuits and 1 no-suit) consisting of a maximum flexion and a constrained lifting task. While a higher stiffness elastic reduced back extensor muscle activity by 13%, it restricted maximum range of motion (RoM) by 13°. The adaptive impedance approach did not restrict RoM while reducing back extensor muscle activity by 15%, when lifting. This study highlights an adaptive impedance approach might improve usability by circumventing the assistance-restriction trade-off inherent to passive approaches. Practitioner summary: This study demonstrates a soft active exosuit that delivers assistance with an adaptive impedance approach can provide reductions in overall back muscle activity without the impacts of restricted range of motion or perception of restriction and discomfort.
Preparation and characterization of some new oxazEPine compounds AND theirS ANTIBACTERIAL ACTIVITY
Creators: name: Ahmed, Natiq G.
name: Al-Hashimi, Hussein Y.
Publisher: name: European Chemical Bulletin
Year: 2016

description: This study include the synthesis of the ketonic compound 1 through (the reactance equal moles from morpholine, 4-nitrobenzaldehyde, 3-nitro acetophenone) and then the reactance compound 1 with different aromatic amines (4-aminoantipyrine, p-phenylenediamine, 2-aminopyridine) to prepare Schiff bases compounds (2-4) that contains a set of one or more of groups azomethine (-C=N-) that have been used in preparation of many heterocyclic compounds, that when they reacted with maleic anhydride gives 1,3-oxazepine compounds (a ring with seven atoms) (5-7) and with phthalic anhydride gives benzo[1,3]oxazepine compounds (a ring with seven atoms) (8-10), the synthesized compounds were identified using physical and spectral methods (melting points, colour change, thin layer chromatography, infrared spectra, ultraviolet spectra and nuclear magnetic resonance spectra), as biological effectiveness has been measured for some of the prepared compounds.
description: European Chemical Bulletin, Vol 5, No 3 (2016): European Chemical Bulletin
Synthesis, characterization and biological evaluation of triazine based Schiff base metal complexes
Creators: name: Singh, Kiran
name: Raparia, Sunita
name: Raparia, Shashi
Publisher: name: European Chemical Bulletin
Year: 2016

description: A new series of Co(II), Ni(II), Cu(II) and Zn(II) complexes with a Schiff base derived from 4-amino-3-mercapto-5-oxo-1,2,4-triazine and  2,4-dichlorobenzaldehyde have been synthesized and characterized by spectroscopic studies. The coordination possibility of the Schiff base towards the metal ions have been determined by analytical, spectral (IR, 1H NMR, electronic spectroscopy, fluorescence, ESR) and thermal techniques. IR and thermal data support the presence of coordinated water in the metal complexes. The low molar conductance values in DMF indicate the non-electrolytic nature of the metal complexes. All the synthesized metal complexes show enhancement in fluorescence intensity in comparison to the ligand. The cyclic voltammetric studies of the Co(II), Ni(II) and Cu(II) complexes suggested the single electron transfer quasi-reversible nature of the complexes. Antimicrobial studies of the ligand and its metal complexes have been carried out in vitro against gram positive (S. aureus, B. subtilis), gram negative bacteria (E. coli, P. aeruginosa) and yeasts (S. cerevisiae, C. albicans).
description: European Chemical Bulletin, Vol 5, No 3 (2016): European Chemical Bulletin
Alzheimer's disease-causing presenilin-1 mutations have deleterious effects on mitochondrial function
Creators: name: Han, Jihoon
name: Park, Heejin
name: Maharana, Chinmoyee
name: Gwon, A-Ryeong
name: Park, Jinsu
name: Baek, Seung Hyun
name: Bae, Han-Gyu
name: Cho, Yoonsuk
name: Kim, Hark Kyun
name: Sul, Jae Hoon
name: Lee, Jeongmi
name: Kim, Eunae
name: Kim, Junsik
name: Cho, Yong Eun
name: Park, Sun-Young
name: Palomera, Leon F
name: Arumugam, Thiruma
name: Mattson, Mark P
name: Jo, Dong-Gyu
Publisher: name: La Trobe
Year: 2021
Subjects: Uncategorized

description: No description supplied
OpenAIRE Graph Community Call - March 19 2025
Creators: name: Pispiringas, Leonidas
Publisher: name: Zenodo
Year: 2025
Subjects: monitor
national open access monitor
open access

description: The 13th OpenAIRE Graph Community Call took place on Wednesday 19 March 2025, where Leonidas Pispiringas, Scholarly Communication Technical Expert at OpenAIRE, presented the National Open Access Monitor use case.

This presentation is part of the Community Call series where the OpenAIRE Graph team dives into the makings and workings of the OpenAIRE Graph, one of the world’s largest Scholarly Knowledge Graphs, and give you the floor for questions, feedback, & suggestions.

Recording: https://youtu.be/wJzXaz8UGCo?si=F_sg-AgqpQaxc6Bi
Transcriptome analyses of barley roots inoculated with novel paenibacillus sp. And erwinia gerundensis strains reveal beneficial early-stage plant–bacteria interactions
Creators: name: Li, Tongda
name: Mann, Ross
name: Kaur, Jatinder
name: Spangenberg, German
name: Sawbridge, Tim
Publisher: name: La Trobe
Year: 2024
Subjects: classificationCode: 30
subject: Agricultural, veterinary and food sciences
classificationCode: 3004
subject: Crop and pasture production
classificationCode: 31
subject: Biological sciences
subject: FOS: Biological sciences
classificationCode: 3105
subject: Genetics
classificationCode: 3107
subject: Microbiology
classificationCode: 3108
subject: Plant biology

description: Plant growth-promoting bacteria can improve host plant traits including nutrient uptake and metabolism and tolerance to biotic and abiotic stresses. Understanding the molecular basis of plant–bacteria interactions using dual RNA-seq analyses provides key knowledge of both host and bacteria simultaneously, leading to future enhancements of beneficial interactions. In this study, dual RNA-seq analyses were performed to provide insights into the early-stage interactions between barley seedlings and three novel bacterial strains (two Paenibacillus sp. strains and one Erwinia gerundensis strain) isolated from the perennial ryegrass seed microbiome. Differentially expressed bacterial and barley genes/transcripts involved in plant–bacteria interactions were identified, with varying species-and strain-specific responses. Overall, transcriptome profiles suggested that all three strains improved stress response, signal transduction, and nutrient uptake and metabolism of barley seedlings. Results also suggested potential improvements in seedling root growth via repressing ethylene biosynthesis in roots. Bacterial secondary metabolite gene clusters producing compounds that are potentially associated with interactions with the barley endophytic microbiome and associated with stress tolerance of plants under nutrient limiting conditions were also identified. The results of this study provided the molecular basis of plant growth-promoting activities of three novel bacterial strains in barley, laid a solid foundation for the future development of these three bacterial strains as biofertilisers, and identified key differences between bacterial strains of the same species in their responses to plants.
Transcriptome analyses of barley roots inoculated with novel paenibacillus sp. And erwinia gerundensis strains reveal beneficial early-stage plant–bacteria interactions
Creators: name: Li, Tongda
name: Mann, R
name: Kaur, J
name: Spangenberg, German
name: Sawbridge, Tim
Publisher: name: La Trobe
Year: 2021
Subjects: Uncategorized

description: Plant growth-promoting bacteria can improve host plant traits including nutrient uptake and metabolism and tolerance to biotic and abiotic stresses. Understanding the molecular basis of plant–bacteria interactions using dual RNA-seq analyses provides key knowledge of both host and bacteria simultaneously, leading to future enhancements of beneficial interactions. In this study, dual RNA-seq analyses were performed to provide insights into the early-stage interactions between barley seedlings and three novel bacterial strains (two Paenibacillus sp. strains and one Erwinia gerundensis strain) isolated from the perennial ryegrass seed microbiome. Differentially expressed bacterial and barley genes/transcripts involved in plant–bacteria interactions were identified, with varying species-and strain-specific responses. Overall, transcriptome profiles suggested that all three strains improved stress response, signal transduction, and nutrient uptake and metabolism of barley seedlings. Results also suggested potential improvements in seedling root growth via repressing ethylene biosynthesis in roots. Bacterial secondary metabolite gene clusters producing compounds that are potentially associated with interactions with the barley endophytic microbiome and associated with stress tolerance of plants under nutrient limiting conditions were also identified. The results of this study provided the molecular basis of plant growth-promoting activities of three novel bacterial strains in barley, laid a solid foundation for the future development of these three bacterial strains as biofertilisers, and identified key differences between bacterial strains of the same species in their responses to plants.
CHIZMА GЕОMЕTRIYА MАSHG'ULОTLАRIDА PARALLEL HARAKATLANTIRISH USULINI О'RGАTISHDА ZАMОNАVIY TЕHNОLОGIYАLАRNI QО'LLАSH MЕTОDIKАSI
Creators: name: Jamilova, Dilsuza
Publisher: name: Zenodo
Year: 2025

description: Ushbu chizmа gеоmеtriyа mаshg’ulоtlаridа parallel harakatlantirish  usulini о’rgаtishdа zаmоnаviy tеhnоlоgiyаlаrni qо’llаsh mеtоdikаsi nomli tezisning dolzarbligi shundaki bugungi kundа chizmа gеоmеtriyа dаrslаridа о’quvchilаrni ijоdiy jаrаyоngа о’quv jаrаyоnidа kоmyutеr vа аxbоrоt tеxnоlоgiyаlаridаn fоydаlаnish hоzirgi kunning dоlzаrb usullаridаn hisоblаnаdi chizmа gеоmеtriyа dаrslаridа multimеdiyаdаn fоydаlаnib, оrtоgаnаl prоеksiyаlаrni qаytа tuzish usullаrini kо’rsаtib bеrish,  tаlаbаlаrdа ijоdiy jаrаyоngа yо`nаltirish, fаzоviy tаsаvvurni rivоjlаntirish, mаntiqiy fikrlаsh, gеоmеtrik о‘lchаsh vа yаsаshning аmаliy usullаrini о‘rgаnish imkоniyаtlаrini bеrаdi.  Аsоsiysi, multimеdiyа dаsturi аsоsidа (аnimаtsiyа)lаrdаn fоydаlаnilgаn hоldа chizmа chizish, diаgrаmmа, jаdvаl kо‘rinishidаgi mа’lumоtlаrni о‘qish qоbiliyаtini rivоjlаntirаdi, mustаqil о‘qish vа о‘rgаnishgа imkоniyаt yаrаtаdi.
Transcriptome analyses of barley roots inoculated with novel paenibacillus sp. And erwinia gerundensis strains reveal beneficial early-stage plant–bacteria interactions
Creators: name: Li, Tongda
name: Mann, R
name: Kaur, Jatinder
name: Spangenberg, German
name: Sawbridge, Tim
Publisher: name: La Trobe
Year: 2024

description: Plant growth-promoting bacteria can improve host plant traits including nutrient uptake and metabolism and tolerance to biotic and abiotic stresses. Understanding the molecular basis of plant–bacteria interactions using dual RNA-seq analyses provides key knowledge of both host and bacteria simultaneously, leading to future enhancements of beneficial interactions. In this study, dual RNA-seq analyses were performed to provide insights into the early-stage interactions between barley seedlings and three novel bacterial strains (two Paenibacillus sp. strains and one Erwinia gerundensis strain) isolated from the perennial ryegrass seed microbiome. Differentially expressed bacterial and barley genes/transcripts involved in plant–bacteria interactions were identified, with varying species-and strain-specific responses. Overall, transcriptome profiles suggested that all three strains improved stress response, signal transduction, and nutrient uptake and metabolism of barley seedlings. Results also suggested potential improvements in seedling root growth via repressing ethylene biosynthesis in roots. Bacterial secondary metabolite gene clusters producing compounds that are potentially associated with interactions with the barley endophytic microbiome and associated with stress tolerance of plants under nutrient limiting conditions were also identified. The results of this study provided the molecular basis of plant growth-promoting activities of three novel bacterial strains in barley, laid a solid foundation for the future development of these three bacterial strains as biofertilisers, and identified key differences between bacterial strains of the same species in their responses to plants.
Additional file 1 of What have we learnt from the past – would treatment decisions for GEP-NET patients differ between 2012 to 2016 by the new recommendations in 2022?
Creators: name: Stiefel, Rahel
name: Lehmann, Kuno
name: Winder, Thomas
name: Siebenhüner, Alexander R.
Publisher: name: figshare
Year: 2024
Subjects: Medicine
Molecular Biology
Pharmacology
Biotechnology
Chemical Sciences not elsewhere classified
Cancer
Science Policy

description: Additional file 1: Appendix Table B1. Stages (ENETS) atinitial diagnosis according to primary site. Table B2. Different treatments(all subsequent lines) according to initial grade (ENETS/WHO 2010) of disease. Figure B1.Kaplan Meier curves showing OS (months) according to different grades(ENETS/WHO 2010) at first diagnosis, log-rank test, p = 0.001. Figure B2.Kaplan Meier estimator for median OS of GEP-NET patients according to primarysite and grade (ENETS/WHO 2010).
Additional file 1 of Low intensity ultrasound-mediated drug-loaded nanoparticles intravaginal drug delivery: an effective synergistic therapy scheme for treatment of vulvovaginal candidiasis
Creators: name: Yang, Min
name: Cao, Yuchao
name: Zhang, Zhifei
name: Guo, Jiajun
name: Hu, Can
name: Wang, Zhibiao
name: Du, Yonghong
Publisher: name: figshare
Year: 2024
Subjects: Biochemistry
Space Science
Medicine
Molecular Biology
Pharmacology
Chemical Sciences not elsewhere classified
Cancer
Computational Biology

description: Additional file 1: Fig. S1. The viability effect of ultrasound on macrophages A and L. crispatus B treated at intensity of 0.5 W/cm2, 1.0 W/cm2 and irradiation time of 5 min, 10 min, 15 min in 50% duty cycle of pulse mode. Fig. S2. The comparison of macrophages viability A and L. crispatus viability B treated with free AmB and AmB-NPs at different concentrations of AmB from 0 to 16 μg/mL. Fig. S3 Observation of constructed vulvovaginal candidiasis model in rabbits after 3 days and 5 days of continuous injection of C. albicans solution into the vagina by Macroscopical, Gram staining (bar = 10 μm), HE staining (bar = 100 μm) and C. albicans culture of vaginal lavage fluid on SDA. Fig. S4. H&E stained images of rabbit vaginas conducted by different treatments (scale bar = 20 μm, 40 × magnification). Fig. S5. PAS stained images of rabbit vaginas conducted by different treatments (scale bar = 20 μm, 40 × magnification).
Additional file 1 of Coagulase-negative staphylococci from bovine milk: Antibiogram profiles and virulent gene detection
Creators: name: Getahun, Yared Abate
name: Abey, Solomon Lulie
name: Beyene, Achenef Melaku
name: Belete, Mequanint Addisu
name: Tessema, Tesfaye Sisay
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Supplementary Material 1