cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
title: Ergebnisse der palliativen Zystektomie bei Patienten mit lokal fortgeschrittenem (pT4) Harnblasenkarzinom (BCa)
Creators: name: Maisch, P.
name: Lunger, L.
name: Düwel, C.
name: Schmid, S.
name: Horn, T.
name: Gschwend, J.
name: Heck, M.
Publisher: name: German Medical Science GMS Publishing House
Year: 2021
Subjects: subject: 610 Medical sciences; Medicine

description: Einleitung: Obwohl die radikale Zystektomie (Cx) den Therapiestandard des muskelinvasiven BCa darstellt, ist das onkologische Ergebnis bei pT4 Tumoren bisher wenig untersucht. Auch im lokal fortgeschrittenen Stadium kann eine Cx indiziert sein. Ziel dieser retrospektiven Studie war die Evaluation der[zum vollständigen Text gelangen Sie über die oben angegebene URL]
description: 61. Jahrestagung der Südwestdeutschen Gesellschaft für Urologie e.V.
Lagrangian Description, Symplectic Structure, and Invariants of 3D Fluid Flow
Creators: name: Gumral, H.
Publisher: name: arXiv
Year: 1997
Subjects: subject: Exactly Solvable and Integrable Systems (nlin.SI)
subject: FOS: Physical sciences

description: Three dimensional unsteady flow of fluids in the Lagrangian description is considered as an autonomous dynamical system in four dimensions. The condition for the existence of a symplectic structure on the extended space is the frozen field equations of the Eulerian description of motion. Integral invariants of symplectic flow are related to conservation laws of the dynamical equation. A scheme generating infinite families of symmetries and invariants is presented. For the Euler equations these invariants are shown to have a geometric origin in the description of flow as geodesic motion; they are also interpreted in connection with the particle relabelling symmetry.
description: Plain Latex, 15 pages
Ligilactobacillus pobuzihii Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O'Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020, COMB. NOV.
Creators: name: Zheng, Jinshui
name: Wittouck, Stijn
name: Salvetti, Elisa
name: Franz, Charles M. A. P.
name: Harris, Hugh M. B.
name: Mattarelli, Paola
name: O'Toole, Paul W.
name: Pot, Bruno
name: Vandamme, Peter
name: Walter, Jens
name: Watanabe, Koichi
name: Wuyts, Sander
name: Felis, Giovanna E.
name: Gänzle, Michael G.
name: Lebeer, Sarah
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Bacteria
Firmicutes
Bacilli
Lactobacillales
Lactobacillaceae
Ligilactobacillus
Ligilactobacillus pobuzihii

description: DESCRIPTION OF LIGILACTOBACILLUS POBUZIHII COMB. NOV.
 Ligilactobacillus pobuzihii (po.bu.zi’hi.i. N.L. gen. n. pobuzihii referring to the isolation of the type strain from pobuzihi, fermented cummingcordia).
 Basonym: Lactobacillus pobuzihii Chen et al. 2010, 1916 VP
Original characteristics of the species are described in [223]. The genome size of the type strain is 2.35 Mbp. The mol% G+C content of DNA is 37.7.
Isolated from pobuzihi, fermented cummincordia, fermented fish, and traditional vinegar.
 The type strain is E100301 T = RIFY6501 T = JCM 18084 T = KCTC 13174 T = NBRC 103219 T.
Genome accession number: JQCN00000000.
16S rRNA gene accession number: AB326358.
description: Published as part of Zheng, Jinshui, Wittouck, Stijn, Salvetti, Elisa, Franz, Charles M. A. P., Harris, Hugh M. B., Mattarelli, Paola, O'Toole, Paul W., Pot, Bruno, Vandamme, Peter, Walter, Jens, Watanabe, Koichi, Wuyts, Sander, Felis, Giovanna E., Gänzle, Michael G. & Lebeer, Sarah, 2020, A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae, pp. 2782-2858 in International Journal of Systematic and Evolutionary Microbiology 70 (4) on page 2824, DOI: 10.1099/ijsem.0.004107, http://zenodo.org/record/10114954
Extracting Social Support and Social Isolation Information from Clinical Psychiatry Notes: Comparing a Rule-based NLP System and a Large Language Model
Creators: name: Patra, Braja Gopal
name: Lepow, Lauren A.
name: Kumar, Praneet Kasi Reddy Jagadeesh
name: Vekaria, Veer
name: Sharma, Mohit Manoj
name: Adekkanattu, Prakash
name: Fennessy, Brian
name: Hynes, Gavin
name: Landi, Isotta
name: Sanchez-Ruiz, Jorge A.
name: Ryu, Euijung
name: Biernacka, Joanna M.
name: Nadkarni, Girish N.
name: Talati, Ardesheer
name: Weissman, Myrna
name: Olfson, Mark
name: Mann, J. John
name: Charney, Alexander W.
name: Pathak, Jyotishman
Publisher: name: arXiv
Year: 2024
Subjects: subject: Computation and Language (cs.CL)
subject: FOS: Computer and information sciences

description: Background: Social support (SS) and social isolation (SI) are social determinants of health (SDOH) associated with psychiatric outcomes. In electronic health records (EHRs), individual-level SS/SI is typically documented as narrative clinical notes rather than structured coded data. Natural language processing (NLP) algorithms can automate the otherwise labor-intensive process of data extraction.
 Data and Methods: Psychiatric encounter notes from Mount Sinai Health System (MSHS, n=300) and Weill Cornell Medicine (WCM, n=225) were annotated and established a gold standard corpus. A rule-based system (RBS) involving lexicons and a large language model (LLM) using FLAN-T5-XL were developed to identify mentions of SS and SI and their subcategories (e.g., social network, instrumental support, and loneliness).
 Results: For extracting SS/SI, the RBS obtained higher macro-averaged f-scores than the LLM at both MSHS (0.89 vs. 0.65) and WCM (0.85 vs. 0.82). For extracting subcategories, the RBS also outperformed the LLM at both MSHS (0.90 vs. 0.62) and WCM (0.82 vs. 0.81).
 Discussion and Conclusion: Unexpectedly, the RBS outperformed the LLMs across all metrics. Intensive review demonstrates that this finding is due to the divergent approach taken by the RBS and LLM. The RBS were designed and refined to follow the same specific rules as the gold standard annotations. Conversely, the LLM were more inclusive with categorization and conformed to common English-language understanding. Both approaches offer advantages and are made available open-source for future testing.
description: 2 figures, 3 tables
The Pivotal Role of Causality in Local Quantum Physics
Creators: name: Schroer, Bert
Publisher: name: arXiv
Year: 1998
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: In this article an attempt is made to present very recent conceptual and computational developments in QFT as new manifestations of old and well establihed physical principles. The vehicle for converting the quantum-algebraic aspects of local quantum physics into more classical geometric structures is the modular theory of Tomita. As the above named laureate to whom I have dedicated has shown together with his collaborator for the first time in sufficient generality, its use in physics goes through Einstein causality. This line of research recently gained momentum when it was realized that it is not only of structural and conceptual innovative power (see section 4), but also promises to be a new computational road into nonperturbative QFT (section 5) which, picturesquely speaking, enters the subject on the extreme opposite (noncommutative) side.
description: This is a updated version which has been submitted to Journal of Physics A, tcilatex 62 pages. Adress: Institut fuer Theoretische Physik FU-Berlin, Arnimallee 14, 14195 Berlin presently CBPF, Rua Dr. Xavier Sigaud 150, 22290-180 Rio de Janeiro, Brazil
title: Characterization of Mesothelioma Stem Cells, Their Metabolic Signature and Susceptibility to Selected Mitocans
Creators: name: Alizadeh Pasdar, Elham
Publisher: name: Griffith University
Year: 2015
Subjects: subject: Tumor cells
subject: Cancer stem cell (CSC) model
subject: Mesothelioma cells
subject: Mesothelioma Stem Cells

description: Populations of tumor cells display a remarkable diversity in their phenotypic traits, including their drug resistance and ability to form metastases. This heterogeneity has recently been explained by the cancer stem cell (CSC) model. In this study, we investigated the presence of CSCs in established malignant mesothelioma (MM) cell lines and characterized their molecular and metabolic features. Mesothelioma cells successfully formed mesospheres as a model of cancer stem cells. Mesospheres had the capacity to initiate tumours in immunodeficient mice and maintained this capacity through serial transplantation. We identified CD24, ABCG2 and Oct4 as potential markers of mesothelioma stem cells and showed that CD24 knockdown cells exhibit loss of sphere formation capacity, change of morphology, decrease in the rate of proliferation and lower tumorigenicity. Subjecting mesospheres to serial transplantation resulted in more aggressive tumors, which expressed consistently higher levels of stem cell markers. CSCs have distinct molecular and biological signature, but little is known about their mitochondrial and metabolic features. Our data reveal that like somatic stem cells, MM CSCs exhibit lower levels of normalised oxidative phosphorylation and mtDNA, and use glycolysis as their main source of energy production, thus have increased levels of lactate formation and glucose uptake and lower levels of ATP and mitochondrial proteins. They also feature enhanced mitochondrial membrane potential [...] and ROS generation.
title: Radikale Zytektomie mit Ileum Conduit bei ≥ 80-jährigen Patienten – Standard oder zu großes Risiko?
Creators: name: Abdeen, M.
name: Siemer, S.
name: Stöckle, M.
name: Saar, M.
Publisher: name: German Medical Science GMS Publishing House
Year: 2021
Subjects: subject: 610 Medical sciences; Medicine

description: Einleitung: Aufgrund ihrer Fragilität und Multimorbidität ist das Komplikationsrisiko der Zystektomie (Zx) bei den über 80-jährigen deutlich höher als bei jüngeren Patienten. Im Vergleich zu einer Ureterocutaneostomie (UC) bietet das Ileumconduit (IC) eine bessere Lebensqualität,[zum vollständigen Text gelangen Sie über die oben angegebene URL]
description: 61. Jahrestagung der Südwestdeutschen Gesellschaft für Urologie e.V.
Generative Models for Synthetic Biology
Creators: Blazejewski, Tomasz
Publisher: name: Columbia University
Year: 2020
Subjects: subject: Bioinformatics
subject: FOS: Computer and information sciences
subject: Biology--Classification
subject: Molecular biology
subject: Synthetic biology
subject: Machine learning
subject: Amino acid sequence

description: Over the past several years, the fields of synthetic biology and machine learning have demonstrated marked advances in the scale of their capabilities and the success of their applications. The work presented in this thesis focuses on the translation of recent advances in machine learning toward new applications in synthetic biology. In particular it is argued that the needs of synthetic biology researchers and practitioners are well met by a class of generative machine learning models, and that the scale of synthetic biology capabilities allows for their successful application across multiple domains of interest. In Chapter 1, a novel algorithm utilizing Markov Random Fields is used to, for the first time, design functional synthetic overlapping pairs of genes with potential applications for improved biological robustness and biosafety. In Chapter 2, motivated by a desire to extend the scope of protein sequence modeling to a greater range and diversity of protein sequences, a variant of a variational autoencoder model is used to project hundreds of millions of protein sequences into a continuous latent space with potentially useful representation features. Finally, in Chapter 3, we move beyond the realm of protein sequences to define a probabilistic species-specific model of regulatory sequences and explore this model’s utility for the challenging task of gene expression prediction for non-model bacterial organisms. Machine learning models presented in this thesis represent novel applications of models traditionally applied to data in the domains of images, text or sound toward addressing challenging problems in biology. Particular attention is devoted to the challenging task of utilizing large amounts of unlabeled data present in metagenomic sequences and the genomes of poorly characterized bacteria in the hope of improving researchers’ abilities to manipulate complex biological phenomena.
A prescription for projectors to compute helicity amplitudes in D dimensions
Creators: name: Chen, Long
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: This article discusses a prescription to compute polarized dimensionally regularized amplitudes, providing a recipe for constructing simple and general polarized amplitude projectors in D dimensions that avoids conventional Lorentz tensor decomposition and avoids also dimensional splitting. Because of the latter, commutation between Lorentz index contraction and loop integration is preserved within this prescription, which entails certain technical advantages. The usage of these D-dimensional polarized amplitude projectors results in helicity amplitudes that can be expressed solely in terms of external momenta, but different from those defined in the existing dimensional regularization schemes. Furthermore, we argue that despite being different from the conventional dimensional regularization scheme (CDR), owing to the amplitude-level factorization of ultraviolet and infrared singularities, our prescription can be used, within an infrared subtraction framework, in a hybrid way without re-calculating the (process-independent) integrated subtraction coefficients, many of which are available in CDR. This hybrid CDR-compatible prescription is shown to be unitary. We include two examples to demonstrate this explicitly and also to illustrate its usage in practice.
description: Matched to the version to be published in Eur. Phys. J. C
Ligilactobacillus ruminis Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O'Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020, COMB. NOV.
Creators: name: Zheng, Jinshui
name: Wittouck, Stijn
name: Salvetti, Elisa
name: Franz, Charles M. A. P.
name: Harris, Hugh M. B.
name: Mattarelli, Paola
name: O'Toole, Paul W.
name: Pot, Bruno
name: Vandamme, Peter
name: Walter, Jens
name: Watanabe, Koichi
name: Wuyts, Sander
name: Felis, Giovanna E.
name: Gänzle, Michael G.
name: Lebeer, Sarah
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Bacteria
Firmicutes
Bacilli
Lactobacillales
Lactobacillaceae
Ligilactobacillus
Ligilactobacillus ruminis

description: DESCRIPTION OF LIGILACTOBACILLUS RUMINIS COMB. NOV.
 Ligilactobacillus ruminis (ru’mi.nis. N.L. gen. n. ruminis of rumen).
 Basonym: Lactobacillus ruminis Sharpe et al. 1973, 47 (Approved Lists)
 Strains of L. ruminis are motile by peritrichous flagella, anaerobic, and grow on surface only under reduced oxygen pressure; growth in liquid media is supported with the addition of cysteine–HCl. Strains isolated from sewage are nonmotile and do not grow at 45 °C [224]. The genome size of the type strain is 2.01 Mbp. The mol% G+C content of DNA is 43.4.
Isolated from rumen of cow and from sewage; also commonly found in the gut of humans, horses and pigs and bovine uterus. Genomic analyses indicated a differentiation of specific phylogenetic lineages of the species to specific vertebrate hosts [225].
 The type strain is RFIT = ATCC 27780 T = CCUG 39465 T = CIP 103153 T = DSM 20403 T = JCM 1152 T = LMG 10756 T = NBRC 102161 T = NRRL B-14853 T.
Genome accession number: AYYL00000000.
16S rRNA gene accession number: AB326354.
description: Published as part of Zheng, Jinshui, Wittouck, Stijn, Salvetti, Elisa, Franz, Charles M. A. P., Harris, Hugh M. B., Mattarelli, Paola, O'Toole, Paul W., Pot, Bruno, Vandamme, Peter, Walter, Jens, Watanabe, Koichi, Wuyts, Sander, Felis, Giovanna E., Gänzle, Michael G. & Lebeer, Sarah, 2020, A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae, pp. 2782-2858 in International Journal of Systematic and Evolutionary Microbiology 70 (4) on page 2824, DOI: 10.1099/ijsem.0.004107, http://zenodo.org/record/10114954
Nonexistence of smooth Levi-flat hypersurfaces in complex projective spaces of dimension >= 3
Creators: name: Siu, Yum-Tong
Publisher: name: arXiv
Year: 2000
Subjects: subject: Complex Variables (math.CV)
subject: Differential Geometry (math.DG)
subject: FOS: Mathematics

description: In this paper we prove the following theorem. Main Theorem. Let n >= 3 and m >= 3n/2 +7. Then there exists no C^m Levi-flat real hypersurface M in P_n. The condition that M is Levi-flat means that when M is locally defined by the vanishing of a C^m real-valued function f, at every point of M the restriction of d d-bar f to the complex tangent space of M is identically zero. The case of the nonexistence of C^\infty Levi-flat real hypersurface in P_2 is motivated by problems in dynamical systems in P_2.
description: 27 pages, published version, abstract added in migration
title: Aconogonon polystachyum (Wall. ex Meisn.) Small
Creators: name: :None
Publisher: name: Universitätsbibliothek
Year: 2009
Subjects: subject: Digitale Pflanzenbilder: Sammlung Dietmar Brandes
subject: 580

description: Pflanzensammlung Dietmar Brandes: Digitale Pflanzenbilder
Closed orbits of gradient flows and logarithms of non-abelian Witt vectors
Creators: name: Pajitnov, A.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Differential Geometry (math.DG)
subject: FOS: Mathematics

description: We consider the flows generated by generic gradients of Morse maps of a closed connected manifold $M$ to a circle. To each such flow we associate an invariant counting the closed orbits of the flow. Each closed orbit is counted with the weight derived from its index and homotopy class. The resulting invariant is called the eta function, and lies in a suitable quotient of the Novikov completion of the group ring of the fundamental group of $M$. Its abelianization coincides with the logarithm of the twisted Lefschetz zeta function of the flow. For $C^0$-generic gradients we obtain a formula expressing the eta function in terms of the torsion of a special homotopy equivalence between the Novikov complex of the gradient flow and the completed simplicial chain complex of the universal cover of $M$.
description: 27 pages, Latex file, revised for publication. To appear in "K-theory"
Generative Modeling and Inference in Directed and Undirected Neural Networks
Creators: Stinson, Patrick
Publisher: name: Columbia University
Year: 2020
Subjects: subject: Statistics
subject: FOS: Mathematics
subject: Computer science
subject: Neural networks (Computer science)
subject: Distribution (Probability theory)
subject: Distribution (Probability theory)--Mathematical models

description: Generative modeling and inference are two broad categories in unsupervised learning whose goal is to answer the following questions, respectively: 1. Given a dataset, how do we (either implicitly or explicitly) model the underlying probability distribution from which the data came and draw samples from that distribution? 2. How can we learn an underlying abstract representation of the data? In this dissertation we provide three studies that each in a different way improve upon specific generative modeling and inference techniques. First, we develop a state-of-the-art estimator of a generic probability distribution's partition function, or normalizing constant, during simulated tempering. We then apply our estimator to the specific case of training undirected probabilistic graphical models and find our method able to track log-likelihoods during training at essentially no extra computational cost. We then shift our focus to variational inference in directed probabilistic graphical models (Bayesian networks) for generative modeling and inference. First, we generalize the aggregate prior distribution to decouple the variational and generative models to provide the model with greater flexibility and find improvements in the model's log-likelihood of test data as well as a better latent representation. Finally, we study the variational loss function and argue under a typical architecture the data-dependent term of the gradient decays to zero as the latent space dimensionality increases. We use this result to propose a simple modification to random weight initialization and show in certain models the modification gives rise to substantial improvement in training convergence time. Together, these results improve quantitative performance of popular generative modeling and inference models in addition to furthering our understanding of them.
title: Differentialdiagnosen kardialer Raumforderung bei Patienten mit fortgeschrittenem Urothelkarzinom der Harnblase
Creators: name: Mansour, J.
name: Buchgeister, P.
name: Teber, D.
name: Garlonta, V.
Publisher: name: German Medical Science GMS Publishing House
Year: 2021
Subjects: subject: 610 Medical sciences; Medicine

description: Einleitung: Kardiale Metastasen des Urothelkarzinoms kommen äußerst selten vor und sind haben in den meisten Fällen eine schlechte Prognose. Patienten mit kardialer Raumforderung sind anfangs meistens asymptomatisch. Diese werden dann zufallsbefundlich im Rahmen des Stagings entdeckt.[zum vollständigen Text gelangen Sie über die oben angegebene URL]
description: 61. Jahrestagung der Südwestdeutschen Gesellschaft für Urologie e.V.
Renormalization group of probabilistic cellular automata with one absorbing state
Creators: name: de Oliveira, M. J.
name: Satulovsky, J.
Publisher: name: arXiv
Year: 1996
Subjects: subject: Adaptation and Self-Organizing Systems (nlin.AO)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We apply a recently proposed dynamically driven renormalization group scheme to probabilistic cellular automata having one absorbing state. We have found just one unstable fixed point with one relevant direction. In the limit of small transition probability one of the cellular automata reduces to the contact process revealing that the cellular automata are in the same universality class as that process, as expected. Better numerical results are obtained as the approximations for the stationary distribution are improved.
description: Errors in some formulas have been corrected. Additional material available at http://mestre.if.usp.br/~javier
Generation of T Cell Responses and Immunological Memory Following Influenza Infection and Vaccination in Early Life and Adulthood
Creators: Zens, Kyra Denise
Publisher: name: Columbia University
Year: 2017
Subjects: subject: Immunology
subject: FOS: Clinical medicine
subject: T cells
subject: Influenza
subject: Immunologic memory

description: Influenza is a significant cause of morbidity and mortality worldwide. Individuals with underlying immune conditions, including the very young, are particularly vulnerable. Infection elicits lasting antibody and T cell-mediated immune responses although antibody-mediated protection is limited due to the mutagenic nature of influenza viral surface antigens. T cell responses, in contrast, target conserved viral proteins and can protect from highly disparate strains. Compared to circulating memory, non-circulating, lung tissue-resident memory T cells (TRM) generated following influenza infection mediate enhanced viral clearance and protection following challenge. Thus, vaccination strategies promoting TRM may convey enhanced protection from disease compared to those relying on circulating responses. The factors governing TRM generation, however, are unclear and whether individuals most susceptible to infection, such as the very young, generate functional TRM is not known.
      This body of work investigates the nature of T cell responses and TRM establishment following influenza vaccination and infection in early life and adulthood. We have identified distinct capacities of commercially available inactivated influenza virus (IIV) and live-attenuated influenza virus (LAIV) vaccines to elicit protective responses with IIV inducing strain-specific neutralizing antibodies and LAIV generating lung-localized, virus-specific TRM capable of providing heterosubtypic protection upon viral challenge. We have further found that infants generate robust primary T cell responses following influenza infection or LAIV vaccination comparable to adults. However, mice infected or vaccinated in infancy fail to efficiently generate TRM and are less protected from subsequent infection in adulthood. We have identified enhanced expression of T-bet, known to promote effector differentiation while limiting memory T cell establishment, by primary infant effectors and further demonstrate that heterozygous infants expressing reduced T-bet generate lung TRM comparable to adults. Together, these findings have implications in influenza vaccine design, highlighting differing mechanisms of protection between IIV and LAIV, establishing TRM as a correlate of vaccine-mediated protection to influenza, as well as identifying cell-intrinsic dysregulation of a transcriptional pathway early in life necessary for effective lung TRM generation.
A Time-Split MacCormack Scheme for Two-Dimensional Nonlinear Reaction-Diffusion Equations
Creators: name: Ngondiep, Eric
Publisher: name: arXiv
Year: 2019
Subjects: subject: Numerical Analysis (math.NA)
subject: FOS: Mathematics
subject: 65M10, 65M05

description: A three-level explicit time-split MacCormack scheme is proposed for solving the two-dimensional nonlinear reaction-diffusion equations. The computational cost is reduced thank to the splitting and the explicit MacCormack scheme. Under the well known condition of Courant-Friedrich-Lewy (CFL) for stability of explicit numerical schemes applied to linear parabolic partial differential equations, we prove the stability and convergence of the method in $L^{\infty}(0,T;L^{2})$-norm. A wide set of numerical evidences which provide the convergence rate of the new algorithm are presented and critically discussed.
description: 25 pages; 12 figures; 6 tables
Ligilactobacillus saerimneri Zheng, Wittouck, Salvetti, Franz, Harris, Mattarelli, O'Toole, Pot, Vandamme, Walter, Watanabe, Wuyts, Felis, Gänzle & Lebeer, 2020, COMB. NOV.
Creators: name: Zheng, Jinshui
name: Wittouck, Stijn
name: Salvetti, Elisa
name: Franz, Charles M. A. P.
name: Harris, Hugh M. B.
name: Mattarelli, Paola
name: O'Toole, Paul W.
name: Pot, Bruno
name: Vandamme, Peter
name: Walter, Jens
name: Watanabe, Koichi
name: Wuyts, Sander
name: Felis, Giovanna E.
name: Gänzle, Michael G.
name: Lebeer, Sarah
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Bacteria
Firmicutes
Bacilli
Lactobacillales
Lactobacillaceae
Ligilactobacillus
Ligilactobacillus saerimneri

description: DESCRIPTION OF LIGILACTOBACILLUS SAERIMNERI COMB. NOV.
 Ligilactobacillus saerimneri (sae.rim’ne.ri. N.L. gen. masc. n. saerimneri of Saerimner, a pig occurring in Nordic mythology, because the organism was isolated from pigs).
 Basonym: Lactobacillus saerimneri Pedersen and Roos 2004, 1367 VP
Strains of this species grows aerobically in MRS agar but at a lower rate compared to anaerobic growth. They do not hydrolize aesculin [226]. The genome size of the type strain is 1.69 Mbp. The mol% G+C content of DNA is 42.6.
 Isolated from pig faeces. The habitat of L. saerimneri is the intestines of pigs, the human gut and vagina and the cecum of chicken.
 The type strain is GDA154 T = CCUG 48462 T = DSM 16049 T = JCM 15955 T = LMG 22087 T.
Genome accession number: AZFP00000000.
16S rRNA gene accession number: AY255802.
description: Published as part of Zheng, Jinshui, Wittouck, Stijn, Salvetti, Elisa, Franz, Charles M. A. P., Harris, Hugh M. B., Mattarelli, Paola, O'Toole, Paul W., Pot, Bruno, Vandamme, Peter, Walter, Jens, Watanabe, Koichi, Wuyts, Sander, Felis, Giovanna E., Gänzle, Michael G. & Lebeer, Sarah, 2020, A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae, pp. 2782-2858 in International Journal of Systematic and Evolutionary Microbiology 70 (4) on page 2824, DOI: 10.1099/ijsem.0.004107, http://zenodo.org/record/10114954
title: An enquiry into how the depiction of Australian east-coast rainforest trees in jewellery, small objects and sculpture can contribute to contemporary analyses of the material and social histories associated with settler culture
Creators: name: Lane, Alicia B
Publisher: name: Griffith University
Year: 2023
Subjects: subject: contemporary jewellery
subject: sculpture
subject: post-colonial
subject: silver
subject: rainforest
subject: history

description: This research project centres on the production of a series of sculptural objects, jewellery pieces and vessels that examine contemporary Australian settler society’s relationships to the landscape and its history of appropriation, exploitation and degradation. These artworks employ botanical motifs and designs that are based on a selection of rainforest trees that are endemic to the sub-tropical rainforests of the east coast of Australia and figure prominently in the landscape surrounding Brisbane, Queensland. The main subjects of these artworks, red cedar, crows ash, hoop pine and silky oak, were heavily cut for timber and cleared for agriculture from the beginning of European settlement until well into the 20th century. The destruction of these forests drove the local economy and the timber of these trees became an integral component of local material culture in the form of houses, furniture and countless other objects. The wood from these trees became the very framework and fabric of local cities and towns as it was built into aesthetic forms that have become an important aspect of the collective experience of place in this region. Historic silverware and jewellery that was produced in the latter half of the 1800s has been an important aspect of this research as these pieces are powerful expressions of European settlers’ perceptions of the Australian landscape as a site of conquest and plunder. Selected contemporary artists whose work has been informed by these historic pieces and whose work offers contemporary responses to these objects, the depiction of the flora of Australia and the experience of inhabiting the Australian landscape are also considered in this research. The materiality of these objects, both historic and contemporary, and the cultural values that this embodies and represents is also an important area of investigation. Through my studio research I have sought to produce work that offers a contemporary critique of these historic objects and the cultural histories and values that they represent. While my work intends to honour the aesthetic beauty and biological importance of these trees and highlight their role in the history of settlement and the development of the architectural character of the region, it does so while acknowledging the symbolism of certain forms and materials and how the methods of making confer specific cultural values upon the objects produced. The work is intended to be a questioning of how these complex and conflicting factors can be fused into sensitive and nuanced artworks that invite deeper considerations of our perceived place in the landscape and how the actions of the past continue to inform the present.
On Noether's and Weyl's bound in positive characteristic
Creators: name: Knop, Friedrich
Publisher: name: arXiv
Year: 2002
Subjects: subject: Representation Theory (math.RT)
subject: Commutative Algebra (math.AC)
subject: FOS: Mathematics
subject: 13A50

description: In this note we generalize several well known results concerning invariants of finite groups from characteristic zero to positive characteristic not dividing the group order. The first is Schmid's relative version of Noether's theorem. That theorem compares the degrees of generators of a group with those of a subgroup. Then we prove a suitable positive characteristic version of Weyl's theorem on vector invariants: polarization works in small degrees. Using that we show that the regular representation has the "most general" ring of invariants, thereby generalizing theorems of Schmid and Smith.
description: 16 pages, v2: minor changes, final version
title: Entwicklung von Nomogrammen anhand des UBC ® -Rapid-Tests und klinischen Parametern zur Erstdiagnose von Harnblasenkarzinomen
Creators: name: Meisl, C.
name: Karakiewicz, P.
name: Einarsson, R.
name: Koch, S.
name: Hallmann, S.
name: Weiß, S.
name: Barski, D.
name: Otto, T.
name: Gössl, A.
name: Arndt, C.
name: Kramer, M.
name: Hennig, M.
name: Ecke, T.
Publisher: name: German Medical Science GMS Publishing House
Year: 2021
Subjects: subject: 610 Medical sciences; Medicine

description: Einleitung: Der UBC®-Rapid-Test ist ein quantitativer Schnelltest, der Blasenkrebs (BK) durch Messung der Zytokeratinfragmente 8 und 18 im Urin nachweisen kann. Mit einer Sensitivität von 56–71% und eine Spezifität von 61–96% wird der UBC®-Rapid-Test noch [zum vollständigen Text gelangen Sie über die oben angegebene URL]
description: 61. Jahrestagung der Südwestdeutschen Gesellschaft für Urologie e.V.
WDVV and DZM
Creators: name: Carroll, Robert
Publisher: name: arXiv
Year: 1997
Subjects: subject: Exactly Solvable and Integrable Systems (nlin.SI)
subject: FOS: Physical sciences

description: We show how the WDVV equations and the DZM system can be characterized via a background family of functions.
description: Latex, 14 pages
title: [Fall 1] Atypische retroperitoneale Raumforderung als Erstbefund eines metastasierten, klarzelligen Nierenzellkarzinoms ohne renalen Primärtumor
Creators: name: Vollemaere, J.
name: Siemer, S.
name: Stöckle, M.
name: Linxweiler, J.
Publisher: name: German Medical Science GMS Publishing House
Year: 2021
Subjects: subject: 610 Medical sciences; Medicine

description: Einleitung: Retroperitoneale Raumforderungen sind seltene Tumore und können in benigne und maligne Typen unterteilt werden. Es gibt Hinweise, dass 70–80% der primären retroperitonealen Tumore maligne sind. Retroperitoneale Sarkome sollten immer in die Differentialdiagnosen eingeschlossen[zum vollständigen Text gelangen Sie über die oben angegebene URL]
description: 61. Jahrestagung der Südwestdeutschen Gesellschaft für Urologie e.V.
Generative processes in Stockhausen's Lichter - Wasser
Creators: Bianchi, Oscar
Publisher: name: Columbia University
Year: 2013
Subjects: Music
Composition (Music)
Music theory

description: An overview on a highly intertwined generative system through Stockhausen's late piece Lichter - Wasser (1998-1999). Lichter - Wasser is a work that constantly attempts to conjugate the contemplation and the paroxism of an ur-element, the so called super formula, with the long sought utopia of the infinite progress of perception faculties (a journey formally began in 1955 with Stockhausen's composition Gruppen, for three orchestral groups).
Investigating the Genetic Links Between Immune Cell Profiles and Bladder Cancer: A Multidisciplinary Bioinformatics Approach
Creators: name: Jiang, Zhongji
name: Zhang, Jin
Publisher: name: Zenodo
Year: 2025

description: Table S1. Instrument variables for exposureTable S2. Bladder cancer related immune cells screened by MRTable S3. Results of MR Egger intercept horizontal pleitropy testTable S4. Results of heterogeneity testTable S5. Results of reverse MR for bladder cancer related immunesTable S6. Characteristics of the four bladder cancer RNA sequencing datasetsTable S7. SNP conversion results for immune cells associated with bladder cancer using SNPenseTable S8. Differential expression result of iDEGsTable S9. CIBERSORT analysis of bladder cancer reveals immune cell infiltrationTable S10. Enrichment analysis of iDEGsTable S11. PPI network of iDEGsTable S12.  Results of XGB model construction
Molecular Fullerides
Creators: name: Fullagar, Wilfred K
Publisher: name: The Australian National University
Year: 1997
Subjects: fullerides
fullerenes
C60
superconductivity
near-infrared spectroscopy
neutron scattering
synchrotron
X-ray powder diffraction
vibrational analysis
liquid ammonia titration

description: The closed shell structures of certain all-carbon fragments originally observed in mass spectroscopy experiments leads to the enhanced stability of these species, known as fullerenes, which have excited sufficient interest amongst chemists and physicists over the last decade to warrant the award of the 1996 Nobel Prize for Chemistry to their discoverers. ¶ Studies of the stability, symmetry, and consequent remarkable properties of fullerenes began in earnest in 1991 with the development of a technique enabling the production and purification of macroscopic quantities of material. The best known and most widely studied fullerene is the truncated icosahedral C60 molecule, which forms the basis of the present work.
title: [Fall 2] Übertragung eines metastasierenden Melanoms durch Nierentransplantation – ein Fallbericht
Creators: name: Vollemaere, J.
name: Siemer, S.
name: Stöckle, M.
name: Linxweiler, J.
name: Zeuschner, P.
name: Sester, U.
name: Mihm, J.
name: Pföhler, C.
name: Saar, M.
Publisher: name: German Medical Science GMS Publishing House
Year: 2021
Subjects: subject: 610 Medical sciences; Medicine

description: Einleitung: Die allogene Nierentransplantation ist die beste Behandlungsmethode für Patienten mit terminaler Niereninsuffizienz. Mögliche Organspender werden vor Freigabe ausführlich hinsichtlich möglicher Infektionen oder Malignome abgeklärt und multidisziplinär besprochen,[zum vollständigen Text gelangen Sie über die oben angegebene URL]
description: 61. Jahrestagung der Südwestdeutschen Gesellschaft für Urologie e.V.
Additional file 1: of Extensive genome analysis of Coxiella burnetii reveals limited evolution within genomic groups
Creators: name: Hemsley, Claudia
name: OâNeill, Paul
name: Essex-Lopresti, Angela
name: Norville, Isobel
name: Atkins, Tim
name: Titball, Richard
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Table S1. Coverage data for the nine UK C. burnetii genomes sequenced in this study after remapping of sequence reads onto the NM-I reference genome. (PDF 339 kb)
From Transfer to Transformation: Rethinking the Relationship between Research and Policy
Creators: name: Gibson, Brendan John Joseph
Publisher: name: The Australian National University
Year: 2003
Subjects: research
policy makers
policy making
meta-policy
national public health policy
Australia
breast cancer screening
prostate cancer screening
needle and syringe programs
prisons

description: The most common and enduring explanation for the way research is used (or abused or not used) in policy is the ‘two communities’ theory. According to this theory, the problematic relationship between research and policy is caused by the different ‘cultures’ inhabited by policy makers and researchers. The most common and enduring types of strategies that are put forward to increase research use in policy involve bridging or linking these ‘two communities’. This study challenges this way of thinking about the relationship between research and policy. Four case studies of national public health policy in Australia are used to present the context, events, processes, research, and actors involved in policy making. Three theories are deployed to explore the relationship between research and policy in each of the cases individually and across the cases as a whole. The Advocacy Coalition Framework (ACF) understands the relationship in terms of a power struggle between competing coalitions that use research as a political resource in the policy process. The Policy Making Organisation Framework (PMOF) understands the relationship in terms of institutional and political factors that determine the way data is selected or rejected from the policy process. The Governmentality Framework (GF) understands the relationship in terms of the Foucauldian construct of power/knowledge that is created through discourse, ‘regimes of truth’ and ‘regimes of practices’ found in public health policy and research. ...
Aggregate Breakdown and Soil Surface Sealing under Rainfall
Creators: name: Geeves, Guy William
Publisher: name: The Australian National University
Year: 1997
Subjects: aggregate breakdown
soil permeability
surface sealing
rainfall
aggregation
soil wetting
raindrop energy
tillage
Cowra
Condobolin
ponding

description: Aggregate breakdown is an important process controlling the availability of fine soil material necessary for structural sealing of soil surfaces under rainfall. It may be caused by slaking resulting from rapid soil wetting and by physical dispersion resulting from direct and indirect energetic raindrop impacts. Relationships have been proposed by others predicting steady infiltration rate and saturated hydraulic conductivity from final aggregate size following high energy rainfall on initially dry, uncovered soil surfaces. Under these extreme conditions, both rapid wetting and energetic raindrop impact result in maximum aggregate breakdown and surface sealing. ¶ This study has isolated and quantified effects of rapid soil wetting and energetic raindrop impact on aggregate breakdown and surface sealing. Simulated rainfall was applied to re-packed soils from differing tillage treatments on light textured soils from near Cowra and Condobolin in New South Wales, Australia. ...
Duopoly Competition for Mobile Data Plans with Time Flexibility
Creators: name: Wang, Zhiyuan
name: Gao, Lin
name: Huang, Jianwei
Publisher: name: arXiv
Year: 2019
Subjects: subject: Computer Science and Game Theory (cs.GT)
subject: FOS: Computer and information sciences

description: The growing competition drives the mobile network operators (MNOs) to explore adding time flexibility to the traditional data plan, which consists of a monthly subscription fee, a data cap, and a per-unit fee for exceeding the data cap. The rollover data plan, which allows the unused data of the previous month to be used in the current month, provides the subscribers with the time flexibility. In this paper, we formulate two MNOs' market competition as a three-stage game, where the MNOs decide their data mechanisms (traditional or rollover) in Stage I and the pricing strategies in Stage II, and then users make their subscription decisions in Stage III. Different from the monopoly market where an MNO always prefers the rollover mechanism over the traditional plan in terms of profit, MNOs may adopt different data mechanisms at an equilibrium. Specifically, the high-QoS MNO would gradually abandon the rollover mechanism as its QoS advantage diminishes. Meanwhile, the low-QoS MNO would progressively upgrade to the rollover mechanism. The numerical results show that the market competition significantly limits MNOs' profits, but both MNOs obtain higher profits with the possible choice of the rollover data plan.
Mixed-species plantations of nitrogen-fixing and non-nitrogen-fixing trees
Creators: name: Forrester, David Ian
Publisher: name: The Australian National University
Year: 2004
Subjects: Eucalyptus globulus
Acacia mearnsii
Eucalyptus nitens
Eucalyptus saligna
Pinus radiata
mixed species plantation
nutrient cycling
nitrogen fixation
growth dynamics
carbon allocation
facilitation
competition

description: Mixed-species plantations of eucalypts and acacias have the potential to improve stand productivity over that of respective monocultures through the facilitative effect of nitrogen-fixation by acacias, and increased resource capture through above- and belowground stratification. However, growth in mixed-species plantations may not be improved compared to that of monocultures when competitive interactions outweigh the effects of improved nutrient availability and resource capture. Careful selection of sites and species is therefore critical to successfully improving stand productivity using mixed-species plantations. This study set out to examine some of the processes and interactions that occur in mixed-species plantations, and the effect nutrient and water availability can have on the growth of mixtures. ¶ In three out of four mixed-species field trials examined in this study, growth was not increased in mixtures compared to monocultures. However, in the fourth field trial, heights, diameters, stand volume and aboveground biomass were higher in mixtures of E. globulus and A. mearnsii from 3-4 years after planting. ¶ ...
title: [Fall 3] Flächige Nekrose der Harnblasenwand als seltene Komplikation einer interventionell-radiologischen Prostataarterienembolisation am Beispiel eines 78-jährigen Patienten mit postinterventioneller Zystektomie
Creators: name: Haas, C.
name: Cerovac, I.
name: Garlonta, V.
Publisher: name: German Medical Science GMS Publishing House
Year: 2021
Subjects: subject: 610 Medical sciences; Medicine

description: Einleitung: Die Prostataarterienembolisation (PAE) stellt als interventionelles Verfahren eine minimal-invasive Alternative zur operativen Therapie des benignen Prostatasyndroms dar. Hiermit kann eine signifikante Besserung von Symptomatik und Harnstrahl erreicht werden. Eine mit der transurethralen[zum vollständigen Text gelangen Sie über die oben angegebene URL]
description: 61. Jahrestagung der Südwestdeutschen Gesellschaft für Urologie e.V.
More About All Current-Algebraic Orbifolds
Creators: name: Halpern, M. B.
name: Wang, J. E.
Publisher: name: arXiv
Year: 2000
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Quantum Algebra (math.QA)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: Recently a construction was given for the stress tensors of all sectors of the general current-algebraic orbifold A(H)/H, where A(H) is any current-algebraic conformal field theory with a finite symmetry group H. Here we extend and further analyze this construction to obtain the mode formulation of each sector of each orbifold A(H)/H, including the twisted current algebra, the Virasoro generators, the orbifold adjoint operation and the commutator of the Virasoro generators with the modes of the twisted currents. As applications, general expressions are obtained for the twisted current-current correlator and ground state conformal weight of each twisted sector of any permutation orbifold A(H)/H, H \subset S_N. Systematics are also outlined for the orbifolds A(Lie h(H))/H of the (H and Lie h)-invariant conformal field theories, which include the general WZW orbifold and the general coset orbifold. Finally, two new large examples are worked out in further detail: the general S_N permutation orbifold A(S_N)/S_N and the general inner-automorphic orbifold A(H(d))/H(d).
description: 60 pages, typos corrected
The Distance from a Rank $n-1$ Projection to the Nilpotent Operators on $\mathbb{C}^n$
Creators: name: Cramer, Zachary
Publisher: name: arXiv
Year: 2019
Subjects: subject: Classical Analysis and ODEs (math.CA)
subject: Functional Analysis (math.FA)
subject: Operator Algebras (math.OA)
subject: FOS: Mathematics
subject: 47A58, 15A99

description: Building on MacDonald's formula for the distance from a rank-one projection to the set of nilpotents in $\mathbb{M}_n(\mathbb{C})$, we prove that the distance from a rank $n-1$ projection to the set of nilpotents in $\mathbb{M}_n(\mathbb{C})$ is $\frac{1}{2}\sec\left(\fracπ{\frac{n}{n-1}+2}\right)$. For each $n\geq 2$, we construct examples of pairs $(Q,T)$ where $Q$ is a projection of rank $n-1$ and $T\in\mathbb{M}_n(\mathbb{C})$ is a nilpotent of minimal distance to $Q$. Furthermore, we prove that any two such pairs are unitarily equivalent. We end by discussing possible extensions of these results in the case of projections of intermediate ranks.
description: 16 pages