cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1 of Linking unfolded protein response to ovarian cancer cell fusion
Creators: name: Yart, Lucile
name: Bastida-Ruiz, Daniel
name: Allard, Mathilde
name: Dietrich, Pierre-Yves
name: Petignat, Patrick
name: Cohen, Marie
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Hematology

description: Additional file 1: Supplementary Table 1. The 10 most significantly upregulated (in grey) and downregulated (in white) genes in SKOV3-M compared to its parental cell lines. Supplementary Table 2. Proteins only found in secretome of SKOV3-M. Supplementary Table 3. Proteins only found in secretome of SKOV3-red and SKOV3-green. Supplementary Figure 1. Protein Venn diagram. Culture supernatants of SKOV3-M (n = 4), SKOV3-Green (n = 2) and SKOV3-Red (n = 2) were analyzed by liquid chromatography-electrospray ionization-mass spectrometry/mass spectrometry. The number of identified proteins is indicated for each cell line. Supplementary Figure 2. Full images of western blots shown in Fig. 1. A- SKOV3 cells treated with UPR modulators. B- COV318 treated with UPR modulators. Red dotted lines indicate the cropping locations. THA: thapsigargin; TUN: tunicamycin; SAL: salubrinal; GSK: GSK2656157; STF: STF-083010. Supplementary Figure 4. Full images of western blots shown in Fig. 3. SKOV3 cells treated with Paclitaxel (0, 1, 10 and 100 nM). A- Red dotted lines indicate the cropping locations. Ptx: Paclitaxel; n1: first experiment; n2: second experiment. B- Pictures of membranes C- Original images at different exposition time. Red dotted lines indicate the cropping locations used for images shown in A-. Supplementary Figure 5. Full image of zymogram shown in Fig. 5. SKOV3-Green (lines 2, 5 and 9), SKOV3-Red (lines 3, 6, and 10), SKOV3-M (lines 4, 7 and 11) and conditioned medium of MCF7 (line 1, marker). Red dotted lines indicate the cropping locations. N1: first experiment; n2: second experiment; n3: third experiment.
Additional file 1 of Study on identification, assay and organoleptic quality of veterinary medicines in Ethiopia
Creators: name: Tefera, Belachew
name: Bacha, Belachew
name: Belew, Sileshi
name: Ravinetto, Raffaella
name: Andualem, Tenaw
name: Abegaz, Zerihun
name: Zelelew, Ayalew
name: Uma, Gudeta
name: Setegn, Tadese
name: Hunduma, Abdisa
name: Jemal, Dinsefa
name: Daba, Diriba
name: Belete, Bizuayehu
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Cell Biology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Cancer
subject: Science Policy

description: Additional file 1: Checklist.
Visual Assessment of Vascular Torsion using Ellipse Fitting
Creators: name: Mistelbauer, Gabriel
name: Zettwitz, Martin
name: Schernthaner, Rüdiger
name: Fleischmann, Dominik
name: Teutsch, Christian
name: Preim, Bernhard
Publisher: name: The Eurographics Association
Year: 2018
Subjects: Computing methodologies
Parametric curve and surface models
Shape analysis

description: Blood vessels are well explored and researched in medicine and visualization. However, the investigation of vascular torsion has yet been unexplored. In order to understand the development and current state of a single blood vessel or even multiple connected ones, properties of vascular structures have to be analyzed. In this paper we assess the torsion of blood vessels in order to better understand their morphology. The aim of this work is to quantitatively gauge blood vessels by using an automated method that assumes an elliptical blood vessel model. This facilitates using state-of-the-art ellipse fitting algorithms from industrial measuring standards. In order to remove outliers, we propose a self-correcting iterative refitting of ellipses using neighboring information. The torsion information is visually conveyed by connecting the major and minor points of adjacent ellipses. Our final visualization comprises a visual representation of the blood vessel including four bands to outline the torsion.
description: Eurographics Workshop on Visual Computing for Biology and Medicine
description: Cardiovascular
description: 129
description: 133
description: Gabriel Mistelbauer, Martin Zettwitz, Rüdiger Schernthaner, Dominik Fleischmann, Christian Teutsch, and Bernhard Preim
description: CCS Concepts: Computing methodologies --> Parametric curve and surface models; Shape analysis
Visual Analysis of Regional Anomalies in Myocardial Motion
Creators: name: Sheharyar, Ali
name: Ruh, Alexander
name: Aristova, Maria
name: Scott, Michael
name: Jarvis, Kelly
name: Elbaz, Mohammed
name: Dolan, Ryan
name: Schnell, Susanne
name: Lin, Kal
name: Carr, James
name: Markl, Michael
name: Bouhali, Othmane
name: Linsen, Lars
Publisher: name: The Eurographics Association
Year: 2018

description: Regional anomalies in the myocardial motion of the left ventricle (LV) are important biomarkers for several cardiac diseases. Myocardial motion can be captured using a velocity-encoded magnetic resonance imaging method called tissue phase mapping (TPM). The acquired data are pre-processed and represented as regional velocities in cylindrical coordinates at three short-axis slices of the left ventricle over one cardiac cycle. We use a spatio-temporal visualization based on a radial layout where the myocardial regions are laid out in an angular pattern similar to the American Heart Association (AHA) model and the temporal dimension increases with increasing radius. To detect anomalies, we compare patient data against the myocardial motion of a cohort of healthy volunteers. For the healthy volunteer cohort, we compute nested envelopes of central regions for the time series of each region and each of the three velocity directions based on the concept of functional boxplots. A quantitative depiction of deviations from the spatio-temporal pattern of healthy heart motion allows for quick detection of regions of interests, which can then be analyzed in more detail by looking at the actual time series. We evaluated our approach in a qualitative user study with imaging and medical experts. The participants appreciated the proposed encoding and considered it a substantial improvement over the current methods.
description: Eurographics Workshop on Visual Computing for Biology and Medicine
description: Cardiovascular
description: 135
description: 144
description: Ali Sheharyar, Alexander Ruh, Maria Aristova, Michael Scott, Kelly Jarvis, Mohammed Elbaz, Ryan Dolan, Susanne Schnell, Kal Lin, James Carr, Michael Markl, Othmane Bouhali, and Lars Linsen
Parameterization and Feature Extraction for the Visualization of Tree-like Structures
Creators: name: Lichtenberg, Nils
name: Lawonn, Kai
Publisher: name: The Eurographics Association
Year: 2018
Subjects: Computing methodologies
Non
photorealistic rendering
Mesh geometry models

description: The study and visualization of vascular structures, using 3D models obtained from medical data, is an active field of research. Illustrative visualizations have been applied to this domain in multiple ways. Researchers have tried to make the geometric properties of vasculature more comprehensive and to augment the surface with representations of multivariate clinical data. Techniques that head beyond the application of color-maps or simple shading approaches require a sort of surface parameterization, i.e., texture coordinates, in order to overcome locality. When extracting 3D models, the computation of texture coordinates on the mesh is not always part of the data processing pipeline. We combine existing techniques to a simple, yet effective, parameterization approach that is suitable for tree-like structures. The parameterization is done w.r.t. to a pre-defined source vertex. For this, we present an automatic algorithm, that detects the root of a tree-structure. The parameterization is partly done in screen-space and recomputed per frame. However, the screen-space computation comes with positive features that are not present in object-space approaches. We show how the resulting texture coordinates can be used for varying hatching, contour parameterization, the display of decals, as an additional depth cue and feature extraction.
description: Eurographics Workshop on Visual Computing for Biology and Medicine
description: Surfaces
description: 145
description: 155
description: Nils Lichtenberg and Kai Lawonn
description: CCS Concepts: Computing methodologies --> Non-photorealistic rendering; Mesh geometry models
Estimation of Muscle Activity in One-Leg Stance from 3D Surface Deformation
Creators: name: Metzler, Johannes
name: Neumann, Thomas
name: Gassel, Stefanie
name: Friedrich, Jens
name: Wacker, Markus
Publisher: name: The Eurographics Association
Year: 2018
Subjects: Applied computing
Life and medical sciences

description: Muscular activity during human motion is usually quantified by measuring the electrical potential during muscle activation using electromyography (EMG). However, apart from producing electrical activity, muscular contraction of many skeletal muscles also induces subtle deformation of the skin surface. In this paper, we present a method to estimate muscular activation from such 3D skin deformation. To this end, we introduce a capture system that reconstructs the 3D motion of the skin from multi-view video data and simultaneously measures true muscle activity with EMG sensors. Our data reveals strong correlations between the skin deformation and muscular activity during one-leg stances. We propose a pose normalization procedure and a novel model based on Supervised Principal Component Regression that automatically segments individual muscles and estimates their activation from 3D surface deformation. Our evaluation shows that the model generalizes to varying body shapes and that the estimated activation closely fits the measured EMG data.
description: Eurographics Workshop on Visual Computing for Biology and Medicine
description: Surfaces
description: 157
description: 166
description: Johannes Metzler, Thomas Neumann, Stefanie Gassel, Jens Friedrich, and Markus Wacker
description: CCS Concepts: Applied computing --> Life and medical sciences
Additional file 9 of High-throughput functional mapping of variants in an arrhythmia gene, KCNE1, reveals novel biology
Creators: name: Muhammad, Ayesha
name: Calandranis, Maria E.
name: Li, Bian
name: Yang, Tao
name: Blackwell, Daniel J.
name: Harvey, M. Lorena
name: Smith, Jeremy E.
name: Daniel, Zerubabell A.
name: Chew, Ashli E.
name: Capra, John A.
name: Matreyek, Kenneth A.
name: Fowler, Douglas M.
name: Roden, Dan M.
name: Glazer, Andrew M.
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Physiology
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Mental Health
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Additional file 9.
VisualFlatter - Visual Analysis of Distortions in the Projection of Biomedical Structures
Creators: name: Grossmann, Nicolas
name: Köppel, Thomas
name: Gröller, Eduard
name: Raidou, Renata Georgia
Publisher: name: The Eurographics Association
Year: 2018
Subjects: Human centered computing
Visual analytics
Applied computing
Life and medical sciences

description: Projections of complex anatomical or biological structures from 3D to 2D are often used by visualization and domain experts to facilitate inspection and understanding. Representing complex structures, such as organs or molecules, in a simpler 2D way often requires less interaction, while enabling comparability. However, the most commonly employed projection methods introduce size or shape distortions, in the resulting 2D representations. While simple projections display known distortion patterns, more complex projection algorithms are not easily predictable.We propose the VisualFlatter, a visual analysis tool that enables visualization and domain experts to explore and analyze projection-induced distortions, in a structured way. Our tool provides a way to identify projected regions with semantically relevant distortions and allows users to comparatively analyze distortion outcomes, either from alternative projection methods or due to different setups through the projection pipeline. The user is given the ability to improve the initial projection configuration, after comparing different setups. We demonstrate the functionality of our tool using four scenarios of 3D to 2D projections, conducted with the help of domain or visualization experts working on different application fields. We also performed a wider evaluation with 13 participants, familiar with projections, to assess the usability and functionality of the Visual Flatter.
description: Eurographics Workshop on Visual Computing for Biology and Medicine
description: Surfaces
description: 167
description: 177
description: Nicolas Grossmann, Thomas Köppel, Eduard Gröller, and Renata Georgia Raidou
description: CCS Concepts: Human-centered computing --> Visual analytics; Applied computing --> Life and medical sciences
Global and Local Mesh Morphing for Complex Biological Objects from µCT Data
Creators: name: Knötel, David
name: Becker, Carola
name: Scholtz, Gerhard
name: Baum, Daniel
Publisher: name: The Eurographics Association
Year: 2018
Subjects: CCS Concepts Computing methodologies
Image processing
Mesh models
Shape analysis
Applied computing
Imaging

description: We show how biologically coherent mesh models of animals can be created from µCT data to generate artificial yet naturally looking intermediate objects. The whole pipeline of processing algorithms is presented, starting from generating topologically equivalent surface meshes, followed by solving the correspondence problem, and, finally, creating a surface morphing. In this pipeline, we address all the challenges that are due to dealing with complex biological, non-isometric objects. For biological objects it is often particularly important to obtain deformations that look as realistic as possible. In addition, spatially non-uniform shape morphings that only change one part of the surface and keep the rest as stable as possible are of interest for evolutionary studies, since functional modules often change independently from one another. We use Poisson interpolation for this purpose and show that it is well suited to generate both global and local shape deformations.
description: Eurographics Workshop on Visual Computing for Biology and Medicine
description: Surfaces
description: 179
description: 183
description: David Knötel, Carola Becker, Gerhard Scholtz, and Daniel Baum
description: CCS Concepts Computing methodologies --> Image processing; Mesh models; Shape analysis; Applied computing --> Imaging
Additional file 1 of Genome-wide identification and phylogenetic and expression pattern analyses of EPF/EPFL family genes in the Rye (Secale cereale L.)
Creators: name: Zhiling, Lin
name: Wenhua, Du
name: Fangyuan, Zhao
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Supplementary Material 1
Improving Perception of Molecular Surface Visualizations by Incorporating Translucency Effects
Creators: name: Hermosilla, Pedro
name: Maisch, Sebastian
name: Vázquez, Pere-Pau
name: Ropinski, Timo
Publisher: name: The Eurographics Association
Year: 2018
Subjects: Human
centered computing
Scientific visualization
Computing methodologies
Computer graphics
Rendering

description: Molecular surfaces are a commonly used representation in the analysis of molecular structures as they provide a compact description of the space occupied by a molecule and its accessibility. However, due to the high abstraction of the atomic data, fine grain features are hard to identify. Moreover, these representations involve a high degree of occlusions, which prevents the identification of internal features and potentially impacts shape perception. In this paper, we present a set of techniques which are inspired by the properties of translucent materials, that have been developed to improve the perception of molecular surfaces: First, we introduce an interactive algorithm to simulate subsurface scattering for molecular surfaces, in order to improve the thickness perception of the molecule. Second, we present a technique to visualize structures just beneath the surface, by still conveying relevant depth information. And lastly, we introduce reflections and refractions into our visualization that improve the shape perception of molecular surfaces. We evaluate the benefits of these methods through crowd-sourced user studies as well as the feedback from several domain experts.
description: Eurographics Workshop on Visual Computing for Biology and Medicine
description: Biology
description: 185
description: 195
description: Pedro Hermosilla, Sebastian Maisch, Pere-Pau Vázquez, and Timo Ropinski
description: CCS Concepts: Human-centered computing --> Scientific visualization; Computing methodologies --> Computer graphics; Rendering
Supplemental Material - Multimorbidity, disease count, mortality and emergency care use in persons attending the emergency department: a cross-sectional data-linkage study. S1: Summary of ICD-10 codes.
Creators: name: McParland, Chris
name: Cooper, Mark A
name: Lowe, David J
name: Stanley, Bethany
name: Johnston, Bridget
Publisher: name: SAGE Journals
Year: 2022
Subjects: Medicine

description: Supplemental Material for Multimorbidity, disease count, mortality and emergency care use in persons attending the emergency department: a cross-sectional data-linkage study by Chris McParland, Mark A Cooper, David J Lowe, Bethany Stanley, Bridget Johnston in Journal of Multimorbidity and Comorbidity
Supplemental Material - Multimorbidity, disease count, mortality and emergency care use in persons attending the emergency department: a cross-sectional data-linkage study. RECORD checklist.
Creators: name: McParland, Chris
name: Cooper, Mark A
name: Lowe, David J
name: Stanley, Bethany
name: Johnston, Bridget
Publisher: name: SAGE Journals
Year: 2022
Subjects: Medicine

description: Supplemental Material for Multimorbidity, disease count, mortality and emergency care use in persons attending the emergency department: a cross-sectional data-linkage study by Chris McParland, Mark A Cooper, David J Lowe, Bethany Stanley, Bridget Johnston in Journal of Multimorbidity and Comorbidity
Semantic Screen-Space Occlusion for Multiscale Molecular Visualization
Creators: name: Koch, Thomas Bernhard
name: Kouril, David
name: Klein, Tobias
name: Mindek, Peter
name: Viola, Ivan
Publisher: name: The Eurographics Association
Year: 2018
Subjects: Human
centered computing
Scientific visualization

description: Visual clutter is a major problem in large biological data visualization. It is often addressed through the means of level of detail schemes coupled with an appropriate coloring of the visualized structures. Ambient occlusion and shadows are often used to improve the depth perception. However, when used excessively, these techniques are sources of visual clutter themselves. In this paper we present a new approach to screen-space illumination algorithms suitable for use in illustrative visualization. The illumination effect can be controlled so that desired levels of semantic scene organization cast shadows while other remain flat. This way the illumination design can be parameterized to keep visual clutter, originating from illumination, to a minimum, while also guiding the user in a multiscale model exploration. We achieve this by selectively applying occlusion shading based on the inherent semantics of the visualized hierarchically-organized data. The technique is in principle generally applicable to any hierarchically organized 3D scene and has been demonstrated on an exemplary scene from integrative structural biology.
description: Eurographics Workshop on Visual Computing for Biology and Medicine
description: Biology
description: 197
description: 201
description: Thomas Bernhard Koch, David Kouril, Tobias Klein, Peter Mindek, and Ivan Viola
description: CCS Concepts: Human-centered computing --> Scientific visualization
Additional file 1 of Study on identification, assay and organoleptic quality of veterinary medicines in Ethiopia
Creators: name: Tefera, Belachew
name: Bacha, Belachew
name: Belew, Sileshi
name: Raffaella, Ravinetto
name: Andualem, Tenaw
name: Abegaz, Zerihun
name: Zelelew, Ayalew
name: Uma, Gudeta
name: Setegn, Tadese
name: Hunduma, Abdisa
name: Jemal, Dinsefa
name: Daba, Diriba
name: Belete, Bizuayehu
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Cell Biology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Cancer
subject: Science Policy

description: Additional file 1: Checklist.
Visual Exploratory Analysis for Multiple T-Maze Studies
Creators: name: Bechtold, Fabrizia
name: Splechtna, Rainer
name: Matkovic, Kresimir
Publisher: name: The Eurographics Association
Year: 2018
Subjects: Human centered computing
Visualization application domains
Visual analytics
Interactive Visual Analysis
Animal Trajectory
Movement Data
Spatial Learning
Memory Retention

description: Evaluation of spatial learning and memory in rodents is commonly carried out using different maze settings such as the Multiple T-Maze. State-of-the-art analysis is primarily based on statistics of quantitative measures stemming from animal trajectories in a maze, e.g. path length or correct decisions made. Currently trajectories themselves are analyzed and evaluated one at a time and comparison of multiple trajectories is a tedious task. The resulting findings may not fully answer complex questions that behavioral researchers encounter as well, e.g., why do animals behave in a certain way or can atypical behaviour be detected? This paper describes an innovative approach on how exploratory analysis for Multiple T-Maze studies can be enhanced through interactive visual analysis. We explain our solution for analyzing a whole ensemble of data at once and support the finding of orientational characteristics and migration patterns within the ensemble. We also abstract the analysis tasks for Multiple TMaze studies and, based on these tasks, we extend a coordinated multiple views system to support the solving of fundamental problems which behavioral researchers face. Besides views of standard charts we deploy a multi-resolution heat map and the Gate-O-Gon, which is a novel visual element. It gives clues on the animals' general movement orientation and distribution of revisited gates, as well as enhances the discovery of patterns in movement and identifying of irregular behavior. Finally we demonstrate the usefulness of the newly proposed approach using a real life data set consisting of 400 Multiple T-Maze runs.
description: Eurographics Workshop on Visual Computing for Biology and Medicine
description: Biology
description: 203
description: 213
description: Fabrizia Bechtold, Rainer Splechtna, and Kresimir Matkovic
description: CCS Concepts: Human-centered computing --> Visualization application domains; Visual analytics; Keywords: Interactive Visual Analysis, Animal Trajectory, Movement Data, Spatial Learning, Memory Retention
TESS Experiments: Self-Affirmation and Affect: Effects on Implementation Intentions
Creators: name: Koblitz, Amber
Publisher: name: Roper Center for Public Opinion Research
Year: 2022

description: Time-sharing Experiments for the Social Sciences (TESS) offers researchers the opportunity to capture the internal validity of experiments. Investigators submit proposals, and TESS fields successful proposals for free on a representative sample of adults in the United States. This experiment was conducted to test whether self-affirmation and emotion directly and interactively influence receptiveness to a health message, risk perceptions and behavior modification intent. Respondents were randomly assigned to one of ten conditions which varied by emotion generation treatment (happiness, sadness, anger, hope, or neutral) and presence or absence of a self-affirmation opportunity. A total of 1,161 respondents participated. After treatment, respondents were presented with a brief message on the link between alcohol use and breast cancer, and then asked to answer questions on their emotional state of the moment, concern about and perceived risk of breast cancer, and intent to alter their alcohol consumption. This allowed for examination of differences between groups in the effects of the health message after affirmation and emotion generation.
sj-docx-1-tan-10.1177_17562864221138144 – Supplemental material for Effects of non-invasive brain stimulation in dystonia: a systematic review and meta-analysis
Creators: name: Morrison-Ham, Jordan
name: Clark, Gillian M.
name: Ellis, Elizabeth G.
name: Cerins, Andris
name: Joutsa, Juho
name: Enticott, Peter G.
name: Corp, Daniel T.
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 110904 Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified

description: Supplemental material, sj-docx-1-tan-10.1177_17562864221138144 for Effects of non-invasive brain stimulation in dystonia: a systematic review and meta-analysis by Jordan Morrison-Ham, Gillian M. Clark, Elizabeth G. Ellis, Andris Cerins, Juho Joutsa, Peter G. Enticott and Daniel T. Corp in Therapeutic Advances in Neurological Disorders
Additional file 1 of Sustainability of exercise-induced benefits on circulating MicroRNAs and physical fitness in community-dwelling older adults: a randomized controlled trial with follow up
Creators: name: Huang, Li-Yuan
name: Lim, Ai Yin
name: Hsu, Chih-Chin
name: Tsai, Yun-Fang
name: Fu, Tieh-Cheng
name: Shyu, Yu-Chiao
name: Peng, Sheng-Chiao
name: Wang, Jong-Shyan
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Physiology
subject: Developmental Biology
subject: Science Policy
subject: Mental Health

description: Supplementary Material 1.
Additional file 2 of Sustainability of exercise-induced benefits on circulating MicroRNAs and physical fitness in community-dwelling older adults: a randomized controlled trial with follow up
Creators: name: Huang, Li-Yuan
name: Lim, Ai Yin
name: Hsu, Chih-Chin
name: Tsai, Yun-Fang
name: Fu, Tieh-Cheng
name: Shyu, Yu-Chiao
name: Peng, Sheng-Chiao
name: Wang, Jong-Shyan
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Physiology
subject: Developmental Biology
subject: Science Policy
subject: Mental Health

description: Supplementary Material 2.
Supplemental Material - Machine Learning Model for Chest Radiographs: Using Local Data to Enhance Performance
Creators: name: Mohn, Sarah F.
name: Law, Marco
name: Koleva, Maria
name: Lee, Brian
name: Berg, Adam
name: Murray, Nicolas
name: Nicolaou, Savvas
name: Parker, William A.
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 110320 Radiology and Organ Imaging
subject: FOS: Clinical medicine

description: Supplemental Material for Machine Learning Model for Chest Radiographs: Using Local Data to Enhance Performance by Sarah F. Mohn, Marco Law, Maria Koleva, Brian Lee, Adam Berg, Nicolas Murray, Savvas Nicolaou, and William A. Parker in Canadian Association of Radiologists Journal
Additional file 3 of Sustainability of exercise-induced benefits on circulating MicroRNAs and physical fitness in community-dwelling older adults: a randomized controlled trial with follow up
Creators: name: Huang, Li-Yuan
name: Lim, Ai Yin
name: Hsu, Chih-Chin
name: Tsai, Yun-Fang
name: Fu, Tieh-Cheng
name: Shyu, Yu-Chiao
name: Peng, Sheng-Chiao
name: Wang, Jong-Shyan
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Physiology
subject: Developmental Biology
subject: Science Policy
subject: Mental Health

description: Supplementary Material 3.
Supplemental Material - Correlation Between Breast Arterial Calcifications and Higher Cardiovascular Risk: Awareness and Attitudes Amongst Canadian Radiologists Who Report Mammography
Creators: name: Heaney, Roisin M.
name: Zaki-Metias, Kaitlin M.
name: McKee, Hayley
name: Wang, Huijuan
name: Ogunde, Barakat
name: Yong-Hing, Charlotte J.
name: Freitas, Vivianne
name: Ghai, Sandeep
name: Seely, Jean M.
name: Nguyen, Elsie T.
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 110320 Radiology and Organ Imaging
subject: FOS: Clinical medicine

description: Supplementary Material for Correlation Between Breast Arterial Calcifications and Higher Cardiovascular Risk: Awareness and Attitudes Amongst Canadian Radiologists Who Report Mammography by Roisin M. Heaney, Kaitlin M. Zaki-Metias, Hayley McKee, Huijuan Wang, Barakat Ogunde, Charlotte J. Yong-Hing, Vivianne Freitas, Sandeep Ghai, Jean M. Seely, and Elsie T. Nguyen in Canadian Association of Radiologists Journal.
Additional file 4 of Sustainability of exercise-induced benefits on circulating MicroRNAs and physical fitness in community-dwelling older adults: a randomized controlled trial with follow up
Creators: name: Huang, Li-Yuan
name: Lim, Ai Yin
name: Hsu, Chih-Chin
name: Tsai, Yun-Fang
name: Fu, Tieh-Cheng
name: Shyu, Yu-Chiao
name: Peng, Sheng-Chiao
name: Wang, Jong-Shyan
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Physiology
subject: Developmental Biology
subject: Science Policy
subject: Mental Health

description: Supplementary Material 4.
El cantor de las hermosas trovas de amor: Digital Edition
Creators: name: Jacsont Pauline
Publisher: name: Zenodo
Year: 2024
Subjects: Spanish literature
Digital edition
XML-TEI

description: Digital edition of a Spanish pliego de cordel (19th c.). It contains the XML-TEI file of the edition, as well as the files that led to this edition, i.e. the digital facsimiles (raw and retouched), and the transcription produced by the OCR tool eScriptorium (ALTO-XML). This digital edition is a part of the research project Desenrollando el cordel / Untangling the cordel / Démêler le cordel (2020-2024), led by professor Constance Carta at the University of Geneva and supported by the philanthropic Sandoz-Monique de Meuron Family Foundation.
Additional file 1 of Signatures of functional bacteriome structure in a tropical direct-developing amphibian species
Creators: name: Martins, Renato A.
name: Greenspan, Sasha E.
name: Medina, Daniel
name: Buttimer, Shannon
name: Marshall, Vanessa M.
name: Neely, Wesley J.
name: Siomko, Samantha
name: Lyra, Mariana L.
name: Haddad, Célio F. B.
name: São-Pedro, Vinícius
name: Becker, C. Guilherme
Publisher: name: figshare
Year: 2022
Subjects: subject: Ecology
subject: FOS: Biological sciences

description: Additional file 1: Supplementary methods, tables and figures.
El cantor de las hermosas trovas de amor: Digital Edition
Creators: name: Jacsont Pauline
Publisher: name: Zenodo
Year: 2022
Subjects: Spanish literature
Digital edition
XML-TEI

description: Digital edition of a Spanish pliego de cordel (19th c.). It contains the XML-TEI file of the edition, as well as the files that led to this edition, i.e. the digital facsimiles (raw and retouched), and the transcription produced by the OCR tool eScriptorium (ALTO-XML). This digital edition is a part of the research project Desenrollando el cordel / Untangling the cordel / Démêler le cordel (2020-2024), led by the professor Constance Carta at the University of Geneva and supported by the philanthropic Sandoz-Monique de Meuron Family Foundation.
Il tempo ambiguo della democrazia corta
Creators: name: Segatori, Roberto
Publisher: name: Università degli Studi di Firenze
Year: 2017

description: In the secular confrontation between economics and politics, the current season is characterized by a return of the supremacy of the former over the latter, due to the speculative game of finance capital. The private-dominant logic of profit reproduction, interconnected with a revolution of the modes of production, is giving rise to widespread social fractures and, subsequently, to a real “democratic stress”. Today’s forms of “short democracy” (populism and “action committees”, on the one hand, practices of participatory democracy on the other) can therefore be read as a reaction – indeed weakly articulated in a systemic way – to the neo-economic imperialism logic and a certain impotence of the traditional forms of politics. But are they a solution?
description: SocietàMutamentoPolitica, Vol 8, N° 15 (2017): Towards a Political Sociology of Our Time
Nazionalismo etnico-culturale e nazionalismo religioso
Creators: name: Montanari, Arianna
Publisher: name: Università degli Studi di Firenze
Year: 2017

description: The process of globalization has followed logics that have not take account of borders and national economic interests. The states appear in difficulty while under and above them are being defined relations and economic flows that transcend them, when they do not ignore them. In addition the massive migration due to wars, famines and hunger are transforming the nations in multi-ethnic and multi-cultural states. The advance of identity fragmentation and the loss of national power facilitates the hiring of an identity based on religion and gives people the advantage of becoming part of an organized community featuring common values. This explains the great attraction that fundamentalism, not only Muslim, but Hindu or Jewish or Christian, exercising on an ever-increasing mass of people. In front of the disorientation linked to the nation’s crisis, religion appears to be the most solid institution, the only one able to offer models of behavior and available alternative. Such as nationalism had been an answer in terms of social cohesion respect to class conflict, the religious nationalism may appear as a cohesive force in front of loss of traditional national identity, reassembling and redrawing boundaries and territories.
description: SocietàMutamentoPolitica, Vol 8, N° 15 (2017): Towards a Political Sociology of Our Time
Additional file 1 of Public attitudes towards sharing loyalty card data for academic health research: a qualitative study
Creators: name: Dolan, Elizabeth H.
name: Shiells, Kate
name: Goulding, James
name: Skatova, Anya
Publisher: name: figshare
Year: 2022
Subjects: subject: Immunology
subject: FOS: Clinical medicine
subject: Science Policy

description: Additional file 1: Appendix S1. Interview Guide.
Il postsecular turn: politica, religione  e società oltre la secolarizzazione?
Creators: name: Biano, Ilaria
Publisher: name: Università degli Studi di Firenze
Year: 2017

description: The debate over the concept of ‘postsecular’ has grown in the last decades gathering both supporters and critics. Originated from the formulation made by Jürgen Habermas, the ‘postsecular turn’ became one of the most successful concepts in the long history of the theory of secularization. Many contemporary analysis of the role of religion in society and politics can be read in the postsecular frame. The aim of this paper is to sum up different aspects and formulations of ‘postsecular’ and show the potential of this approach for understanding contemporary relationships between society, religion and politics.
description: SocietàMutamentoPolitica, Vol 8, N° 15 (2017): Towards a Political Sociology of Our Time
sj-docx-1-phr-10.1177_00333549221138853 – Supplemental material for SARS-CoV-2 Infection and Testing Experiences in a Nationwide Sample of Transgender and Gender-Diverse Adults, June–December 2021
Creators: name: Wirtz, Andrea L.
name: Adams, Dee
name: Poteat, Tonia C.
name: Beckham, S. Wilson
name: Miller, Marissa
name: Brown, Carter
name: Reisner, Sari L.
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 111799 Public Health and Health Services not elsewhere classified
subject: FOS: Health sciences

description: Supplemental material, sj-docx-1-phr-10.1177_00333549221138853 for SARS-CoV-2 Infection and Testing Experiences in a Nationwide Sample of Transgender and Gender-Diverse Adults, June–December 2021 by Andrea L. Wirtz, Dee Adams, Tonia C. Poteat, S. Wilson Beckham, Marissa Miller, Carter Brown and Sari L. Reisner in Public Health Reports
Additional file 2 of Transcriptome-based identification and validation of reference genes for corm growth stages, different tissues, and drought stress in Taro (Colocasia esculenta)
Creators: name: Dong, Weiqing
name: Chen, Qi
name: He, Fanglian
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Supplementary Material 2.
Additional file 2 of Public attitudes towards sharing loyalty card data for academic health research: a qualitative study
Creators: name: Dolan, Elizabeth H.
name: Shiells, Kate
name: Goulding, James
name: Skatova, Anya
Publisher: name: figshare
Year: 2022
Subjects: subject: Immunology
subject: FOS: Clinical medicine
subject: Science Policy

description: Additional file 2: Appendix S2. Table S1. Participant characteristics.
Neighborhood Disadvantage, Social Groups, and Adolescent Violence: Assessing Mechanisms in Structural-Cultural Theories
Creators: name: Thomas, Kyle J.
name: O’Neill, Jennifer
name: Vogel, Matt
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences

description: Structural-cultural perspectives link contextual characteristics to interactions with associates who transmit definitions favorable to crime, thus influencing behavior. Drawing on this, we predict that: (1) adolescents in disadvantaged neighborhoods will be more likely to have parents, friends, and schoolmates who hold violent rationalizations, (2) exposure to associates who hold violent rationalizations will increase an adolescent’s own violent rationalizations, and (3) one’s willingness to rationalize violence will be associated with self-reported violent conduct. Using panel data from the University of Missouri – St. Louis Comprehensive School Safety Initiative and structural equation models, our findings indicate that respondents residing in disadvantaged neighborhoods are more likely to be exposed to associates who report a greater willingness to rationalize violence, which in turn predicts an adolescent’s own rationalizations. Further, one’s willingness to rationalize violence is predictive of violent conduct and mediates the effects of associates’ attitudes on self-reported violence.
Per una visione prismatica della conoscenza nella formazione
Creators: name: Consorti, Fabrizio
Publisher: name: Tutor
Year: 2024

description: In questo articolo si discute una visione della conoscenza ispirata ai principi del realismo critico e del pensiero sistemico. L ’immagine della scomposizione della luce bianca da parte di un prisma viene usata come metafora per esprimere il concetto che la realtà è composta da meccanismi e oggetti materiali e immateriali, come quelli coinvolti nell’educazione, che possono essere rappresentati in modi diversi. La realtà è conoscibile, ma non nella sua interezza (luce bianca). Ne possiamo avere una conoscenza solo in accordo a un punto di vista (uno dei colori) e accettando il limite intrinseco al fatto che la realtà – specie quella educativa – è un sistema complesso aperto. Ciò implica che i nessi causa-effetto lineari fra oggetti sono solo semplificazioni fallaci e che l’unica conoscenza che possiamo avere è quella di tendenze probabilistiche delle relazioni fra oggetti. È anche illusorio pensare di poter sanare le contraddizioni ed i paradossi del mondo fisico e umano: possiamo solo accettarli. Questa posizione viene illustrata con esempi relativi alla scelta dei metodi didattici e all’influenza che i processi socioculturali e psicologici hanno sui processi di formazione. La scelta del punto di vista disciplinare ed epistemologico con cui affrontiamo l’impresa educativa è una responsabilità del formatore, che la effettua sulla base della sua competenza e di una disposizione ispirata all’etica della cura e della responsabilità.
description: Tutor, Vol. 23 No. 2
Additional file 1 of Placental growth factor promotes neural invasion and predicts disease prognosis in resectable pancreatic cancer
Creators: name: Göhrig, Andreas
name: Hilfenhaus, Georg
name: Rosseck, Friederike
name: Welzel, Martina
name: Moser, Benjamin
name: Barbone, Gianluca
name: Kunze, Catarina Alisa
name: Rein, Johannes
name: Wilken, Gregor
name: Böhmig, Michael
name: Malinka, Thomas
name: Tacke, Frank
name: Bahra, Marcus
name: Detjen, Katharina M.
name: Fischer, Christian
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer

description: Suppl. Tables.
Additional file 3 of Public attitudes towards sharing loyalty card data for academic health research: a qualitative study
Creators: name: Dolan, Elizabeth H.
name: Shiells, Kate
name: Goulding, James
name: Skatova, Anya
Publisher: name: figshare
Year: 2022
Subjects: subject: Immunology
subject: FOS: Clinical medicine
subject: Science Policy

description: Additional file 3: Appendix S3. Table S2. The frequency of participant response types.
Additional file 2 of Placental growth factor promotes neural invasion and predicts disease prognosis in resectable pancreatic cancer
Creators: name: Göhrig, Andreas
name: Hilfenhaus, Georg
name: Rosseck, Friederike
name: Welzel, Martina
name: Moser, Benjamin
name: Barbone, Gianluca
name: Kunze, Catarina Alisa
name: Rein, Johannes
name: Wilken, Gregor
name: Böhmig, Michael
name: Malinka, Thomas
name: Tacke, Frank
name: Bahra, Marcus
name: Detjen, Katharina M.
name: Fischer, Christian
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer

description: Suppl. Figure 1.
Additional file 3 of Placental growth factor promotes neural invasion and predicts disease prognosis in resectable pancreatic cancer
Creators: name: Göhrig, Andreas
name: Hilfenhaus, Georg
name: Rosseck, Friederike
name: Welzel, Martina
name: Moser, Benjamin
name: Barbone, Gianluca
name: Kunze, Catarina Alisa
name: Rein, Johannes
name: Wilken, Gregor
name: Böhmig, Michael
name: Malinka, Thomas
name: Tacke, Frank
name: Bahra, Marcus
name: Detjen, Katharina M.
name: Fischer, Christian
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer

description: Suppl. Figure 2.
Additional file 1 of Comparison of two malaria multiplex immunoassays that enable quantification of malaria antigens
Creators: name: Jang, Ihn Kyung
name: Jiménez, Alfons
name: Rashid, Andrew
name: Barney, Rebecca
name: Golden, Allison
name: Ding, Xavier C.
name: Domingo, Gonzalo J.
name: Mayor, Alfredo
Publisher: name: figshare
Year: 2022
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Table S1. Comparison of two multiplex platforms for the quantitative assessment of malaria antigens. Table S2. Characteristics of the Q-Plex and xMAP assays. Table S3. Linear relation between the WHO international standard P. falciparum and P. vivax antigens and assay concentration results in whole blood or DBS. Regression analysis showed the fit of the data with R2 values that met the acceptance criteria (R2 ≥ 0.85). One operator conducted three experiments over a week. Figure S1. HRP2 concentration in (A) whole blood and (B) DBS plotted against the parasitemia. Three subsets of dilution-series samples composed of different P. falciparum laboratory strains (W2, Dd2, and 3BD5) were tested by using the Q-Plex and xMAP. Measured concentration was plotted on the y-axis against parasitemia (par/mL) on the x-axis. Red and blue symbols and regression lines represent samples spiked with different strains and test types. Figure S2. Correlation analysis. Correlation plots of antigen concentration corrected against the WHO international standard P. falciparum and P. vivax antigens, P. falciparum culture, and clinical samples in (A) whole blood and (B) DBS. The Pearson correlation r value and the equation of the regression line obtained from analysis using log transformed data are shown. Outlier sample sets were color-coded.
Additional file 4 of Placental growth factor promotes neural invasion and predicts disease prognosis in resectable pancreatic cancer
Creators: name: Göhrig, Andreas
name: Hilfenhaus, Georg
name: Rosseck, Friederike
name: Welzel, Martina
name: Moser, Benjamin
name: Barbone, Gianluca
name: Kunze, Catarina Alisa
name: Rein, Johannes
name: Wilken, Gregor
name: Böhmig, Michael
name: Malinka, Thomas
name: Tacke, Frank
name: Bahra, Marcus
name: Detjen, Katharina M.
name: Fischer, Christian
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer

description: Suppl. Figure 3.
Preservation And Accessibility Of Primary Research Data, Presentation Of The "Data And Service Center For Humanities" (Dasch)
Creators: name: Jaouen, Loïc
Publisher: name: Zenodo
Year: 2018
Subjects: FORCE11
FAIR
RDF
LinkedOpenData

description: Presentation of the "Data and Service Center for humanities" (DaSCH) at Force11 2018.

The primary goals of the DaSCH are

	Preservation of research data in the humanities and their long-term data curation.

	Ensuring permanent access to research data in order to make it available for further research and thus facilitating the reuse of existing research data in future research.

	Providing services for researchers to assist them with the data life cycle management.

	Encouraging the digital networking of databases created in Switzerland or in other countries.

	Collaboration and networking with other institutions on digital literacy.

For doing so the DaSCH developped dedicated open-source software, Knora (https://www.knora.org/), Salsah (http://www.salsah.org/) and Sipi (http://www.sipi.io/).

For so diverse fields, the developped tools are generics and the DaSCH offers the consultancy and support of researchers and research projects in the Humanities regarding the creation, the use, the re-use and the long-term curation of digital data.

And it operated the required technical infrastructure to effectively store the data in a fully the FAIR compliant (Findable, Accessible, Interoperable, and Re-usable) repository, making it interoperable by using OWL domain ontologies and publishing it through REST API.