cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 2: Table S2. of Wogonin as a targeted therapeutic agent for EBV (+) lymphoma cells involved in LMP1/NF-ÎşB/miR-155/PU.1 pathway
Creators: name: Wu, Xue
name: Liu, Ping
name: Haijun Zhang
name: Li, Yuan
name: Jumah Salmani
name: Wang, Fei
name: Yang, Ke
name: Fu, Rong
name: Zhewei Chen
name: Baoan Chen
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Ct values of gene expression assessed by quantitative PCR in Raji cells after inhibition of miR-155. (DOC 25 kb)
Eugenia turneri McVaugh, Fieldiana, Bot.
Creators: name: Uc Gala, Victor C.
name: Valdemarin, Karinne Sampaio
name: Lucas, Eve
name: Negrão, Raquel
name: Mazine, Fiorella F.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Myrtaceae
Eugenia
Eugenia turneri

description: 77. * Eugenia turneri McVaugh, Fieldiana, Bot. 29: 460 (1963)
EOO: 4 km ². AOO: 4 km ². Evaluation of IUCN: Critically Endangered.
Eugenia turneri is known only from the type collection, made in 1950, at 1,521m elev., from the municipality of Coalcoman, state of Michoacán. The occurrence biome is the Humid Montane Forest of the Sierra de Coalcoman. Although the region is considered as presenting a good state of conservation since there are large areas of vegetation, from the satellite images (Google Earth—https://www.google.com.br/earth/) it is possible to observe areas with exposed soil due to deforestation, understory cleaning or burning, near to the locality where this species was collected. There are areas of crop production on small scale, but the region is known by a high level of flora endemism. There are intentions to transform the region of Rio Balsas into an area protected by the environmental services (CONABIO 2018, Brand 1960). However, currently there is no conservation measure in place for this species or its habitats, even though the state of Michoacán is known for having a great diversity of flora species (CONABIO 2005). Taking a precautionary approach Eugenia turneri is here classified as Critically Endangered (CR), under B2ab(iii). It is worth mentioning that the only existing collection was made in 1950, therefore, and new efforts must be made to collect the species in this region. To confirm if this species could be also tagged as “Possibly Extinct” the documentation must summarize the lines of evidence for and against extinction, describing the surveys carried out to search for the species and specifying the date and relevant details of the last confirmed record (IUCN 2019). According to IUCN Standards and Petitions Committee (2019) the status of all taxa assigned ‘Possibly Extinct’ tags should preferably be reviewed at five-year intervals.
Specimen examined:— MEXICO. Michoacán: Turner 2073 (MICH).
description: Published as part of Uc Gala, Victor C., Valdemarin, Karinne Sampaio, Lucas, Eve, Negrão, Raquel & Mazine, Fiorella F., 2023, Eugenia (Myrtaceae) from Mexico: checklist, distribution, and conservation assessments, pp. 99-140 in Phytotaxa 583 (2) on page 127, DOI: 10.11646/phytotaxa.583.2.1, http://zenodo.org/record/7609258
Additional file 1: Table S1. of Genetic evaluation of the effect of GLCCI1 rs37973 on corticosteroid response in chronic obstructive pulmonary disease
Creators: name: Mosteller, Michael
name: Berge, Maarten Van Den
name: Hosking, Louise
name: Timens, Wim
name: Hiemstra, Pieter
name: Crim, Courtney
name: Postma, Dirkje
name: Ghosh, Soumitra
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy

description: Clinical characteristics of patients with COPD by rs37973 genotype (Studies 1 and 2). Table S2. Clinical characteristics of patients with COPD by rs37973 genotype (GLUCOLD study). Appendix 1. Sensitivity analyses exploring the effect of transformation and covariate adjustment in Study 2. Table S3. The influence of transformation and covariate adjustment on the analysis of change in FEV1 versus rs37973 genotype in patients with COPD (Study 2). Appendix 2. List of Institutional Review Boards/Independent Ethics Committees and the Chairperson (s) for each site. (DOCX 68 kb)
Petitella Gery & Boutiere 1964
Creators: name: Bittencourt, Pedro Senna
name: Machado, Valéria Nogueira
name: Marshall, Bruce Gavin
name: Hrbek, Tomas
name: Farias, Izeni Pires
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Characiformes
Characidae
Petitella

description: Petitella Géry & Boutière, 1964
Type -species. Petitella georgiae Géry & Boutière, 1964
Diagnosis. The genus Petitella is readily distinguished from all remaining characid genera by the possession of a distinctively bright red head, the presence of a black horizontal bar that extends from the end of the caudal peduncle to the middle rays of the caudal-fin, and the presence of an oblique black bar in each caudal-fin lobe, separated by white colored bands. Contact between frontals anterior to frontal fontanel present; posterodorsal margin of ethmoid cartilage and lateral ethmoids distant from lateral ethmoids; 17 or fewer branched anal-fin rays; only one or two anal-fin hooks on each ray of adult males; the presence of parallel longitudinal ridges on the posterior field of scales; scales covering one-third of the length of caudal-fin lobes; coloration of the head distinctively red, especially the snout.
Petitella bleheri (Géry & Mahnert, 1986), new combination Hemigrammus bleheri Géry & Mahnert, 1986:41, fig. unnumb. (original description; type-locality: Middle Rio Negro basin, Brazil, probably near Rio Jufaris).
description: Published as part of Bittencourt, Pedro Senna, Machado, Valéria Nogueira, Marshall, Bruce Gavin, Hrbek, Tomas & Farias, Izeni Pires, 2020, Phylogenetic relationships of the neon tetras Paracheirodon spp. (Characiformes: Characidae: Stethaprioninae), including comments on Petitella georgiae and Hemigrammus bleheri, pp. 1-11 in Neotropical Ichthyology (e 190109) (e 190109) 18 (2) on page 7, DOI: 10.1590/1982-0224-2019-0109, http://zenodo.org/record/13361756
Additional file 1: of Non-invasive respiratory support for infants with bronchiolitis: a national survey of practice
Creators: name: H. Turnham
name: R. Agbeko
name: J. Furness
name: J. Pappachan
name: A. Sutcliffe
name: P. Ramnarayan
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Molecular Biology
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy

description: Survey questionnaire. (PDF 251 kb)
Additional file 9: of Evolution and expression of the fructokinase gene family in Saccharum
Creators: name: Yihong Chen
name: Zhang, Qing
name: Weichang Hu
name: Xingtan Zhang
name: Liming Wang
name: Xiuting Hua
name: Qingyi Yu
name: Ming, Ray
name: Jisen Zhang
Publisher: name: Figshare
Year: 2017
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: Ecology
subject: Developmental Biology
subject: Marine Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Virology

description: The primers for qRT-PCR verification of five SsFRK in four Saccharum species. (DOC 29 kb)
Additional file 9: of Evolution and expression of the fructokinase gene family in Saccharum
Creators: name: Yihong Chen
name: Zhang, Qing
name: Weichang Hu
name: Xingtan Zhang
name: Liming Wang
name: Xiuting Hua
name: Qingyi Yu
name: Ming, Ray
name: Jisen Zhang
Publisher: name: Figshare
Year: 2017
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: Ecology
subject: Developmental Biology
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology

description: The primers for qRT-PCR verification of five SsFRK in four Saccharum species. (DOC 29 kb)
Petitella rhodostoma Bittencourt & Machado & Marshall & Hrbek & Farias 2020, new combination
Creators: name: Bittencourt, Pedro Senna
name: Machado, Valéria Nogueira
name: Marshall, Bruce Gavin
name: Hrbek, Tomas
name: Farias, Izeni Pires
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Characiformes
Characidae
Petitella
Petitella rhodostoma

description: Petitella rhodostoma (Ahl, 1924), new combination
Hemigrammus rhodostomus Ahl, 1924:405, fig. unnumb. (original description; type-locality: Pará). — Ramsperger, 1924:810 (type-locality description: tributary of the Rio Tapajoz [Tapajós], Santarém, Pará).
Comparative remarks. Petitella georgiae is distinguished from its congeners by a long and wide maxillary (vs. very short and round in P. bleheri, and short in P. rhodostoma); single row of premaxillary teeth (vs. two in P. bleheri and P. rhodostoma); dentary with 9–11 teeth with 5 cuspids (vs. 6, with 6 or 7 cuspids, followed by 1 or 2 tricuspidate ones in P. bleheri, and 5–6 with 5 cuspids, usually followed by 4 conical teeth in P. rhodostoma); absence of black spot on lower posterior border of caudal peduncle (vs. present in P. bleheri and P. rhodostoma).
Petitella bleheri is distinguished from its congeners by the much more intense and widespread red color of the head, extending up to the humeral region (vs. limited red coloration and not extending to humeral region in P. georgiae and P. rhodostoma); horizontal black bar on the end of the caudal peduncle is never prolonged forward (vs. prolonged up to the anal-fin in P. georgiae and P. rhodostoma); anal-fin hyaline (vs. a black bar on the base of the anterior part of the anal-fin, continuing obliquely on the branched rays in P. georgiae and P. rhodostoma).
Petitella rhodostoma is distinguished from its congeners by the red head color not extending to the humeral region and the presence of a black spot on the lower posterior border of the caudal peduncle (vs. head color not extending to humeral region with only one black spot on caudal peduncle in P. georgiae, and head color extending to humeral with two black spots on caudal peduncle in P. bleheri); dentary with 5–6 teeth, with 5 cuspids, usually followed by 4 conical ones (vs. 9–11 teeth, with 5 cuspids in P. georgiae, and 6 teeth, with 6 or 7 cuspids, followed by 1 or 2 tricuspidate ones in P. bleheri).
description: Published as part of Bittencourt, Pedro Senna, Machado, Valéria Nogueira, Marshall, Bruce Gavin, Hrbek, Tomas & Farias, Izeni Pires, 2020, Phylogenetic relationships of the neon tetras Paracheirodon spp. (Characiformes: Characidae: Stethaprioninae), including comments on Petitella georgiae and Hemigrammus bleheri, pp. 1-11 in Neotropical Ichthyology (e 190109) (e 190109) 18 (2) on page 7, DOI: 10.1590/1982-0224-2019-0109, http://zenodo.org/record/13361756
Additional file 2: of Associations between degrees of task delegation and job satisfaction of general practitioners and their staff: a cross-sectional study
Creators: name: Riisgaard, Helle
name: Søndergaard, Jens
name: Munch, Maria
name: Le, Jette
name: Ledderer, Loni
name: Pedersen, Line
name: Nexøe, Jørgen
Publisher: name: Figshare
Year: 2017
Subjects: subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Tasks identified through interviews. (DOCX 15 kb)
Eugenia uliginosa Lundell, Wrightia
Creators: name: Uc Gala, Victor C.
name: Valdemarin, Karinne Sampaio
name: Lucas, Eve
name: Negrão, Raquel
name: Mazine, Fiorella F.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Myrtaceae
Eugenia
Eugenia uliginosa

description: 78. * Eugenia uliginosa Lundell, Wrightia 3: 20 (1961b)
EOO: 114,240.681 km ². AOO: 32 km ². Evaluation of IUCN: Near Threatened.
Eugenia uliginosa is distributed in the states of Veracruz, Chiapas, and Oaxaca from 270 to 950 m elev. The estimated extent of occurrence (EOO) exceeds the thresholds for a threatened category under the criterion B, as well as the area of occupancy (AOO) would likely exceed the thresholds of Endangered category if the remaining habitat available is taken in account. There are eight known locations based on 10collections recorded. The occurrence biome is the Humid Tropical Forest. The habitat is mostly conserved and with little alteration. Some localities in Chiapas that are within the region known as “Selva Lacandona”, are in excellent condition, as well as the “Reserva de la Biosfera Los Tuxtlas”, in Veracruz, which has conserved forests. However, the situation in Oaxaca is different, and the species is found in remnants of impacted forests and under a lot of pressure from the urban area expansion (CONABIO 2018, CONANP 2006a), from where a continuing decline of habitat quality is inferred. Eugenia uliginosa is classified as Near Threatened (NT) due to the restricted number of locations related to an inferred decline of habitat quality, especially in Oaxaca and uncertainties on its area of occupancy (AOO). Its assessment as a threatened species based on AOO will be pending of further field surveys to confirm its current distribution, population size, local threats, and habitat trend.
Specimens examined:— MEXICO. Chiapas: Breedlove & Thorne 30761 (MEXU!); Oaxaca: Pascual 421 (MEXU!); Veracruz: Campos & López 5825 (MEXU!).
description: Published as part of Uc Gala, Victor C., Valdemarin, Karinne Sampaio, Lucas, Eve, Negrão, Raquel & Mazine, Fiorella F., 2023, Eugenia (Myrtaceae) from Mexico: checklist, distribution, and conservation assessments, pp. 99-140 in Phytotaxa 583 (2) on page 128, DOI: 10.11646/phytotaxa.583.2.1, http://zenodo.org/record/7609258
title: Der lange Weg zur Autobahn Köln – Bonn
Creators: name: Vahrenkamp, Richard
Publisher: name: Universität Kassel
Year: 2024
Subjects: subject: Rheinland
subject: Düsseldorf
subject: Bonn
subject: Köln
subject: Horion
subject: Adenauer
subject: Arbeitsbeschaffung
subject: Basaltbruch
subject: Steinbruch
subject: Provinziallandtag
classificationCode: 330
subject: 330
classificationCode: Rheinland
subject: Rheinland
classificationCode: Düsseldorf
subject: Düsseldorf
classificationCode: Bonn
subject: Bonn
classificationCode: Köln
subject: Köln
classificationCode: Verkehrspolitik
subject: Verkehrspolitik
classificationCode: Autobahn
subject: Autobahn
classificationCode: Horion, Johannes
subject: Horion, Johannes
classificationCode: Adenauer, Konrad
subject: Adenauer, Konrad
classificationCode: Arbeitsbeschaffung
subject: Arbeitsbeschaffung
classificationCode: Steinbruch
subject: Steinbruch
classificationCode: Geschichte 1925-1932
subject: Geschichte 1925-1932

description:
Das Paper behandelt die Verkehrspolitik in der Provinz Rheinland, wo der Ausbau der Landstrassen wegen der hohen Dichte von Personenwagen und Lastkraftwagen im Rheinland vordringlich war. Ferner behandelt das Paper die Planungen für das Autobahnprojekt Aachen – Düren – Köln, weiterhin die Planungen für das Autobahnprojekt Köln – Düsseldorf, und schließlich die Planung und den Bau für das Autobahnprojekt der Strecke Köln – Bonn (heute Bundesautobahn 555). Der damalige Oberbürgermeister von Köln, Konrad Adenauer, eröffnete im Jahre 1932 die Strecke, die als erste Autobahn in Deutschland gilt. Beim Bau wurden als Arbeitsbeschaffungsmaßnahme die Gewinnung von Pflastersteinen aus lokalen Steinbrüchen eingeplant.
Additional file 3: Appendix 3. of Simulated case management of home telemonitoring to assess the impact of different alert algorithms on work-load and clinical decisions
Creators: name: Illapha Cuba Gyllensten
name: Crundall-Goode, Amanda
name: Aarts, Ronald
name: Goode, Kevin
Publisher: name: Figshare
Year: 2017
Subjects: subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy

description: De-identified participant level data of review times, proportion of ratings and proportion of actions. (DOC 66 kb)
Additional file 2: Appendix 2. of Simulated case management of home telemonitoring to assess the impact of different alert algorithms on work-load and clinical decisions
Creators: name: Illapha Cuba Gyllensten
name: Crundall-Goode, Amanda
name: Aarts, Ronald
name: Goode, Kevin
Publisher: name: Figshare
Year: 2017
Subjects: subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy

description: Proportion of actions suggested, intra class correlation, fleiss kappa and its components when split by algorithm. (DOC 219 kb)
Additional file 8: of Empirical assessment of analysis workflows for differential expression analysis of human samples using RNA-Seq
Creators: name: Williams, Claire
name: Baccarella, Alyssa
name: Parrish, Jay
name: Kim, Charles
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Figure of recall and precision, for each reference dataset. Precision and recall as assessed using the Ingersoll (a, b), Haniffa (c, d), Frankenberger (e, f), and Wong (g, h) references, with top (shaded) and balanced (white) performers labeled. (PDF 185 kb)
Eugenia uxpanapensis P. E. Sanchez & L. M. Ortega, Phytologia
Creators: name: Uc Gala, Victor C.
name: Valdemarin, Karinne Sampaio
name: Lucas, Eve
name: Negrão, Raquel
name: Mazine, Fiorella F.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Myrtaceae
Eugenia
Eugenia uxpanapensis

description: 79. * Eugenia uxpanapensis P.E.Sánchez & L.M.Ortega, Phytologia 63: 404 (1987)
EOO: 274.370 km ². AOO: 24 km ². Evaluation of IUCN: Endangered.
Eugenia uxpanapensis has a restricted distribution for the state of Veracruz from 150 to 350 m elev. The estimated extent of occurrence (EOO) and area of occupancy (AOO) fall between the thresholds of Critically Endangered and Endangered categories under the criterion B. There are up to five known locations, based on seven collection recorded, including five in the municipality of Hidalgotitlán and two in the municipality of San Andrés Tuxtla. The occurrence biome is the Humid Tropical Forest. Excepting the localities placed within the “Reserva de la Biosfera Los Tuxtlas”, which has a low level of ecological degradation (CONABIO 2018, CONANP 2006a), all the other localities are near urban areas or immerse in a fragmented landscape formed by fragmented habitats, from which is inferred a continuing decline of habitat quality. Therefore, Eugenia uxpanapensis is classified here as Endangered (EN), as it meets the criteria B1ab(iii)+B2ab(iii). Further field surveys and monitoring are needed to confirm population size, local threats, and habitat trend in the Los Tuxtlas region, which already which comprises an important region and yet studied by University National Autonomy of Mexico (UNAM).
Specimen examined:— MEXICO. Veracruz: Brigada 991 (MEXU!).
description: Published as part of Uc Gala, Victor C., Valdemarin, Karinne Sampaio, Lucas, Eve, Negrão, Raquel & Mazine, Fiorella F., 2023, Eugenia (Myrtaceae) from Mexico: checklist, distribution, and conservation assessments, pp. 99-140 in Phytotaxa 583 (2) on page 128, DOI: 10.11646/phytotaxa.583.2.1, http://zenodo.org/record/7609258
Additional file 1: Table S1. of A follow-up study of airway symptoms and lung function among residents and workers 5.5 years after an oil tank explosion
Creators: name: Jens-Tore Granslo
name: Bråtveit, Magne
name: Hollund, Bjørg
name: Lygre, Stein
name: Svanes, Cecilie
name: Moen, Bente
Publisher: name: Figshare
Year: 2017
Subjects: subject: Space Science
subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Comparing characteristics, airway symptoms and lung function at baseline (2008/2009) between participants in follow-up and participants only at baseline (lost follow-up), exposed and non-exposed separately. (DOCX 25 kb)
AXBOROT TEXNOLOGIYALARI VA TABIIY ILMIY FANLARNI OʻQITISHDA DOLZARB MUAMMOLAR VA ULARNI HAL QILISHNING INNOVATSION USULLARI
Creators: name: Qodirov, Farrux
name: Normengov, Jo'rabek
Publisher: name: Zenodo
Year: 2024

description: Ushbu maqolada ta'lim tizimida, hususan o'quv jarayonlarida axborot texnologyalari va ularning ahamiyati haqida muallifning mulohazalari keltirilgan. Bunda tashqari ilmiy manbalarga tayangan holda keng tahlillar olib borilgan. Informatika va axborot texnologiyalari fanini o‘qitishda yuzaga kelayotgan muommolar, kamchiliklar va ularni bartaraf qilish to‘g‘risida, shu bilan birga o‘quvchilarni darsga qiziqtirish yo‘llari ko‘rsatib o‘tiladi.
Additional file 1: Table S1. of A follow-up study of airway symptoms and lung function among residents and workers 5.5 years after an oil tank explosion
Creators: name: Jens-Tore Granslo
name: Bråtveit, Magne
name: Hollund, Bjørg
name: Lygre, Stein
name: Svanes, Cecilie
name: Moen, Bente
Publisher: name: Figshare
Year: 2017
Subjects: subject: Space Science
subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Infectious Diseases
subject: FOS: Health sciences

description: Comparing characteristics, airway symptoms and lung function at baseline (2008/2009) between participants in follow-up and participants only at baseline (lost follow-up), exposed and non-exposed separately. (DOCX 25 kb)
Eugenia venezuelensis O. Berg, Linnaea
Creators: name: Uc Gala, Victor C.
name: Valdemarin, Karinne Sampaio
name: Lucas, Eve
name: Negrão, Raquel
name: Mazine, Fiorella F.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Myrtaceae
Eugenia
Eugenia venezuelensis

description: 80. Eugenia venezuelensis O.Berg, Linnaea 27: 188 (1856)
EOO: 3,061,893.065 km ². AOO: 712 km ². Evaluation of IUCN: Least Concern.
Eugenia venezuelensis has a wide distribution within the American continent, from Mexico (Tamaulipas, Veracruz, Chiapas, and Quintana Roo), Central America to Venezuela, including Colombia (WCSP 2020). The estimated extent of occurrence (EOO) exceeds the thresholds for a threatened category under the criterion B, as well as the area of occupancy (AOO) would likely exceed the thresholds of any threatened category when the remaining habitat available is taken in account. The occurrence biome is the Humid Tropical Forest from 0 to 1,200 m elev. Eugenia venezuelensis has a wide distribution and has a total of 230 collection records from Mexico to Venezuela, occupying important areas of vegetation in dry and humid tropical forests, as well as being protected in conservation areas. Currently there are twelve records were found in Mexican territory. Therefore, according to the analysis by BGCI & IUCN (2019k), Eugenia venezuelensis is classified as Least Concern (LC).
Specimens examined:— MEXICO. Chiapas: Martínez S. 25969 (MEXU!); Quintana Roo: Cabrera 17041 (CICY!); Tamaulipas: Palmer 295 (K!); Veracruz: Sinaca & Hanan 23 (MEXU!). Belize: Gentle 4811 (LL); Colombia: Idárraga G. et al. AI5775 (HUA); Guatemala: Contreras 2482 (LL); Honduras: Molina R. 10983 (MO); Nicaragua: Neill 4543 (MO); Panamá: Johnston 387 (MO); Venezuela: Smith 9830 (MO).
description: Published as part of Uc Gala, Victor C., Valdemarin, Karinne Sampaio, Lucas, Eve, Negrão, Raquel & Mazine, Fiorella F., 2023, Eugenia (Myrtaceae) from Mexico: checklist, distribution, and conservation assessments, pp. 99-140 in Phytotaxa 583 (2) on page 128, DOI: 10.11646/phytotaxa.583.2.1, http://zenodo.org/record/7609258
Additional file 8: of Empirical assessment of analysis workflows for differential expression analysis of human samples using RNA-Seq
Creators: name: Williams, Claire
name: Baccarella, Alyssa
name: Parrish, Jay
name: Kim, Charles
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy
subject: Mental Health

description: Figure of recall and precision, for each reference dataset. Precision and recall as assessed using the Ingersoll (a, b), Haniffa (c, d), Frankenberger (e, f), and Wong (g, h) references, with top (shaded) and balanced (white) performers labeled. (PDF 185 kb)
Eugenia verapazensis Lundell, Wrightia
Creators: name: Uc Gala, Victor C.
name: Valdemarin, Karinne Sampaio
name: Lucas, Eve
name: Negrão, Raquel
name: Mazine, Fiorella F.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Myrtaceae
Eugenia
Eugenia verapazensis

description: 81. Eugenia verapazensis Lundell, Wrightia 5: 3 (1972)
EOO: 52.673 km ². AOO: 8 km ². Evaluation of IUCN: Endangered.
Eugenia verapazensis occurs in Chiapas, Mexico, and Guatemala (WCSP 2020). The estimated extent of occurrence (EOO) and area of occupancy (AOO) fall within the thresholds of Critically Endangered category under the criterion B. There are only two known locations based on three collections, with two records from the municipality of Palenque, in the Mexican territory, and one record from Baja Verapaz (Guatemala). The occurrence biome is the Humid Tropical Forest, from 50 to 60 m elev. The species’ habitat is fragmented and degraded due to agricultural activities within the region, from which is inferred a continuing decline of habitat quality. The low collections are due to few efforts to document the species. Considering that this species occurs in a low altitudinal range, usually more affected by anthropic activities, and that there is no conservation measure in place for this species, a precautionary approach is taken and Eugenia verapazensis is classified as Endangered (EN) due its restricted distribution, related to two different locations and inferred continuing decline of habitat, meeting the criteria B1ab(iii)+B2ab(iii). Considering that the last collection was recorded more than 30 years ago, further field efforts and information on population size, local threats, and habitat trend are urgently needed to guarantee that this species is not driven to categories of higher risk in a very short time.
Specimens examined:— MEXICO. Chiapas: Hernández & Torres 815 (MEXU!); Guatemala: Lundell 19178 (LL).
description: Published as part of Uc Gala, Victor C., Valdemarin, Karinne Sampaio, Lucas, Eve, Negrão, Raquel & Mazine, Fiorella F., 2023, Eugenia (Myrtaceae) from Mexico: checklist, distribution, and conservation assessments, pp. 99-140 in Phytotaxa 583 (2) on page 129, DOI: 10.11646/phytotaxa.583.2.1, http://zenodo.org/record/7609258
Additional file 1: Appendix 1. of Simulated case management of home telemonitoring to assess the impact of different alert algorithms on work-load and clinical decisions
Creators: name: Illapha Cuba Gyllensten
name: Crundall-Goode, Amanda
name: Aarts, Ronald
name: Goode, Kevin
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy

description: Study size calculation. (DOC 37 kb)
Additional file 3: of Empirical assessment of analysis workflows for differential expression analysis of human samples using RNA-Seq
Creators: name: Williams, Claire
name: Baccarella, Alyssa
name: Parrish, Jay
name: Kim, Charles
Publisher: name: Figshare
Year: 2017
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology

description: Figure of similarity in performance characteristics of significant gene identification by limma and SAM. Ranks of absolute precision and recall are shown for each workflow, when comparing SAM and limma microarray analysis of the reference datasets (a), comparing SAM and the intersection of SAM and limma (b), or comparing limma and the intersection of SAM and limma (c). (PDF 785 kb)
MOESM1 of Sex-specific chromatin landscapes in an ultra-compact chordate genome
Creators: name: Navratilova, Pavla
name: Danks, Gemma
name: Long, Abby
name: Butcher, Stephen
name: Manak, John
name: Thompson, Eric
Publisher: name: Figshare
Year: 2017
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1. Supplementary Results text.
Eugenia vesca Lundell, Wrightia
Creators: name: Uc Gala, Victor C.
name: Valdemarin, Karinne Sampaio
name: Lucas, Eve
name: Negrão, Raquel
name: Mazine, Fiorella F.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Myrtaceae
Eugenia
Eugenia vesca

description: 82. Eugenia vesca Lundell, Wrightia 2: 212 (1961a)
EOO: 14,343.680 km ². AOO: 40 km ². Evaluation of IUCN: Near Threatened.
Eugenia vesca is distributed in southeastern Mexico (Chiapas) and Guatemala (WCSP 2020). The estimated extent of occurrence (EOO) falls within the Vulnerable category under the criterion B, whilst the area of occupancy (AOO) would likely exceed the thresholds of Endangered category if the remaining habitat available is taken in account. The species biome is the Humid Tropical Forest from 200 to 400 m elev. There are only six to seven known locations, based on 18 records, including two records in the region known as “Selva Lacandona”. The habitat is under low impact of human activities within the region, and there are records in areas of environmental protection such as the “Reserva de la Biosfera Montes Azules”, and the “Reserva de la Biosfera Lacan-tum”, and World heritage monuments like Bonanpak, Yaxchilán and Chan-Kin. The threats that could affect the species are under the control of several governmental organizations that promote the protection of the region (CONABIO 2018, INE-SEMARNAP 2000a). In the same way, in the part of the distribution in Guatemala, the species is protected in the Sierra del Lacandon National Park, which is a protected area with measures for its protection and maintenance. Considering that this species is dependent on protected area and control of threatening activities, it is assessed as Near Threatened (NT) regarding its distribution and number of locations, meeting the criteria B1a+B2a.
Specimens examined:— MEXICO. Chiapas: Martínez S. 11534 (MEXU!); Guatemala: Ortíz 1616 (F).
description: Published as part of Uc Gala, Victor C., Valdemarin, Karinne Sampaio, Lucas, Eve, Negrão, Raquel & Mazine, Fiorella F., 2023, Eugenia (Myrtaceae) from Mexico: checklist, distribution, and conservation assessments, pp. 99-140 in Phytotaxa 583 (2) on page 129, DOI: 10.11646/phytotaxa.583.2.1, http://zenodo.org/record/7609258
Additional file 1: Table S1. of Prognostic impact of programed cell death-1 (PD-1) and PD-ligand 1 (PD-L1) expression in cancer cells and tumor infiltrating lymphocytes in colorectal cancer
Creators: name: Yaqi Li
name: Liang, Lei
name: Weixing Dai
name: Guoxiang Cai
name: Xu, Ye
name: Xinxiang Li
name: Qingguo Li
name: Sanjun Cai
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Cell Biology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer

description: Univariate and multivariate Cox proportional hazards analysis of OS and DFS for patients with CRC in MMR-proficient subgroup of the FUSCC cohort. (DOCX 18Â kb)
Eugenia winzerlingii Standley, Trop. Woods
Creators: name: Uc Gala, Victor C.
name: Valdemarin, Karinne Sampaio
name: Lucas, Eve
name: Negrão, Raquel
name: Mazine, Fiorella F.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Myrtaceae
Eugenia
Eugenia winzerlingii

description: 83. Eugenia winzerlingii Standley, Trop. Woods 11: 20 (1927)
EOO: 172,921.205 km ². AOO: 284 km ². Evaluation of IUCN: Least Concern.
Eugenia winzerlingii has a wide distribution in the Mexican territory, occurring mainly in the southeast of Mexico, but also in Central American countries like Guatemala and Belize (WCSP 2020). The estimated extent of occurrence (EOO) exceeds the thresholds for a threatened category under the criterion B, as well as the area of occupancy (AOO) would likely exceed the thresholds of any threatened category when the remaining habitat available is taken in account. There are more than 10 known locations based on 106 collections recorded. The occurring biomes are the Humid Tropical Forest and the Humid Montane Forest, from 11 to 1,363 m elev. The habitat is mostly in a good state of conservation and with a low rate of ecological degradation, including occurrences within protected areas such as “Reserva de la Biosfera de Calakmul” and “Campo Experimental El Tormento”, both in Campeche and the “Reserva de la Biosfera Montes Azules”, in Chiapas (Mexico), the Maya Biosphere Reserve and the San Miguel La Palotada El Zotz Protected Biotope (Guatemala), and the Crooked Tree Wildlife Sanctuary (Belize) (CONABIO 2018, INESEMARNAP 1999a, INE-SEMARNAP 2000a). Therefore, according to the analysis by the BGCI & IUCN (2019L), Eugenia winzerlingii is classified as Least Concern (LC).
Specimens examined:— MEXICO. Campeche: Martínez S. & Téllez 2962 (MEXU!); Chiapas: Martínez S. 18157 (MEXU!); Quintana Roo: Durán & Olmstead 746 (MEXU!); Tabasco: Menéndez 277 (MEXU!). Belize: Gentry 7648 (MO); Guatemala: Contreras 1619 (LL).
description: Published as part of Uc Gala, Victor C., Valdemarin, Karinne Sampaio, Lucas, Eve, Negrão, Raquel & Mazine, Fiorella F., 2023, Eugenia (Myrtaceae) from Mexico: checklist, distribution, and conservation assessments, pp. 99-140 in Phytotaxa 583 (2) on pages 129-130, DOI: 10.11646/phytotaxa.583.2.1, http://zenodo.org/record/7609258
MOESM2 of Protein expression analysis of a high-demeclocycline producing strain of Streptomyces aureofaciens and the roles of CtcH and CtcJ in demeclocycline biosynthesis
Creators: name: Li, Hong
name: Ruifang Ye
name: Guizhen Lin
name: Deyu Zhu
name: QuanGui Mao
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Additional file 2: Online Resource 2. The plasmids construction of gene overexpression.
MOESM1 of Sex-specific chromatin landscapes in an ultra-compact chordate genome
Creators: name: Navratilova, Pavla
name: Danks, Gemma
name: Long, Abby
name: Butcher, Stephen
name: Manak, John
name: Thompson, Eric
Publisher: name: Figshare
Year: 2017
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Marine Biology
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1. Supplementary Results text.
Additional file 7: Figure S6. of Improved genome sequencing using an engineered transposase
Creators: name: Amirali Kia
name: Gloeckner, Christian
name: Osothprarop, Trina
name: Gormley, Niall
name: Bomati, Erin
name: Stephenson, Michelle
name: Goryshin, Igor
name: He, Molly
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biophysics
subject: Biochemistry
subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Bias plots showing how bulky mutations at K120 distort or shift the symmetry of the graph. (a) NexteraV2 Tn5 (b) K120Y. Symmetry is distorted, resulting from a combination of 9 bp and 10 bp target DNA overlap, with 9 bp dominating (c) K120F. Similar to (b), but 10 bp overlap dominates (d) K120W. Complete switch to 10 bp overlap and the center of symmetry shifts from position 5 to middle of positions 5 and 6 (e) Top view of the Tn5 structure, MEs are shown in magenta color. Target DNA is schematically shown in the figure in shades of blue. K120 is shown in the spherical representation in color red (d) Top view of the structure. (PDF 1226 kb)
MOESM2 of Protein expression analysis of a high-demeclocycline producing strain of Streptomyces aureofaciens and the roles of CtcH and CtcJ in demeclocycline biosynthesis
Creators: name: Li, Hong
name: Ruifang Ye
name: Guizhen Lin
name: Deyu Zhu
name: QuanGui Mao
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Additional file 2: Online Resource 2. The plasmids construction of gene overexpression.
Eugenia xalapensis De Candolle, Prodr.
Creators: name: Uc Gala, Victor C.
name: Valdemarin, Karinne Sampaio
name: Lucas, Eve
name: Negrão, Raquel
name: Mazine, Fiorella F.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Myrtaceae
Eugenia
Eugenia xalapensis

description: 84. * Eugenia xalapensis (Kunth) De Candolle, Prodr. 3: 277 (1828)
Basionym: Myrtus xalapensis Kunth (1823: 145).
EOO: 189,247.587 km ². AOO: 100 km ². Evaluation of IUCN: Least Concern.
Eugenia xalapensis is distributed in eight states of Mexico, mainly in the coastal region of the Gulf of Mexico, in the states of Tamaulipas and Veracruz. The estimated extent of occurrence (EOO) exceeds the thresholds for a threatened category under the criterion B, as well as the area of occupancy (AOO) would likely exceed the thresholds of any threatened category when the remaining habitat available is taken in account. There are more than 10 known locations based on 26 collections recorded within Mexican territory. The occurring biomes are the Humid Montane Forest and the Humid Tropical Forest. The habitat is partially found in well-preserved areas, such as the “Reserva de la Biosfera El Cielo”, in Tamaulipas, and the “Reserva de la Biosfera Sierra Gorda”, in Querétaro (Gobierno de Tamaulipas & TNC 2011, INE-SEMARNAP 1999d). Another important area of occurrence of the species is “Cofre de Perote National Park”, in Veracruz, which presents a medium risk of ecological degradation due to the anthropic activities from which is inferred a continuing decline of habitat in medium time. (CONABIO, 2018; CONANP, 2015b). Therefore, Eugenia xalapensis is here classified as Least Concern (LC).
Specimens examined:— MEXICO. Chiapas: Espinoza 112 (MEXU!); Hidalgo: Sharp 45866 (MEXU!); Oaxaca: Muun et al. 75 (MEXU!); Puebla: Ventura 1082 (MEXU!); Querétaro: Rubio 2291 (MEXU!); San Luis Potosí: McVaugh 10485 (MEXU!); Tamaulipas: Medrano et al. 10425 (MEXU!); Veracruz: Ventura 17586 (MEXU!).
description: Published as part of Uc Gala, Victor C., Valdemarin, Karinne Sampaio, Lucas, Eve, Negrão, Raquel & Mazine, Fiorella F., 2023, Eugenia (Myrtaceae) from Mexico: checklist, distribution, and conservation assessments, pp. 99-140 in Phytotaxa 583 (2) on page 130, DOI: 10.11646/phytotaxa.583.2.1, http://zenodo.org/record/7609258
Additional file 2: of What is the relationship between type 2 diabetes mellitus status and the neuroradiological correlates of cerebral small vessel disease in adults? Protocol for a systematic review
Creators: name: Funnell, Clark
name: Doyle-Waters, Mary
name: Yip, Samuel
name: Field, Thalia
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy

description: Search strategy. (DOCX 14 kb)
Additional file 7: Figure S6. of Improved genome sequencing using an engineered transposase
Creators: name: Amirali Kia
name: Gloeckner, Christian
name: Osothprarop, Trina
name: Gormley, Niall
name: Bomati, Erin
name: Stephenson, Michelle
name: Goryshin, Igor
name: He, Molly
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biophysics
subject: Biochemistry
subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences

description: Bias plots showing how bulky mutations at K120 distort or shift the symmetry of the graph. (a) NexteraV2 Tn5 (b) K120Y. Symmetry is distorted, resulting from a combination of 9 bp and 10 bp target DNA overlap, with 9 bp dominating (c) K120F. Similar to (b), but 10 bp overlap dominates (d) K120W. Complete switch to 10 bp overlap and the center of symmetry shifts from position 5 to middle of positions 5 and 6 (e) Top view of the Tn5 structure, MEs are shown in magenta color. Target DNA is schematically shown in the figure in shades of blue. K120 is shown in the spherical representation in color red (d) Top view of the structure. (PDF 1226 kb)
Additional file 2: Table S1. of PKM2 regulates neural invasion of and predicts poor prognosis for human hilar cholangiocarcinoma
Creators: name: Guanzhen Yu
name: Wenlong Yu
name: Guangzhi Jin
name: Dongyun Xu
name: Chen, Ying
name: Xia, Tian
name: Yu, Allan
name: Wenzheng Fang
name: Xiaoli Zhang
name: Zhaosheng Li
name: Keping Xie
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Association between expression of PKM2, PFKB, and HK1 and clinical variables in HC patients. Table S2. Multivariate analysis of variables associated with TTP and OS in HC patients. Table S3. Multivariate analysis of variables associated with OS in HC patients. Table S4. Correlation of SDC2 expression and clinicopathological factors in HC patients. Table S5. Correlation between PKM2 protein overexpression and SDC2 protein overexpression in HC patients. (DOCX 40 kb)
Additional file 2: Table S1. of PKM2 regulates neural invasion of and predicts poor prognosis for human hilar cholangiocarcinoma
Creators: name: Guanzhen Yu
name: Wenlong Yu
name: Guangzhi Jin
name: Dongyun Xu
name: Chen, Ying
name: Xia, Tian
name: Yu, Allan
name: Wenzheng Fang
name: Xiaoli Zhang
name: Zhaosheng Li
name: Keping Xie
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Association between expression of PKM2, PFKB, and HK1 and clinical variables in HC patients. Table S2. Multivariate analysis of variables associated with TTP and OS in HC patients. Table S3. Multivariate analysis of variables associated with OS in HC patients. Table S4. Correlation of SDC2 expression and clinicopathological factors in HC patients. Table S5. Correlation between PKM2 protein overexpression and SDC2 protein overexpression in HC patients. (DOCX 40 kb)
Additional file 7: of MiR-362-5p promotes the malignancy of chronic myelocytic leukaemia via down-regulation of GADD45α
Creators: name: Yang, Peng
name: Ni, Fang
name: Deng, Rui-Qing
name: Qiang, Guo
name: Zhao, Hua
name: Yang, Ming-Zhen
name: Wang, Xin-Yi
name: Xu, You-Zhi
name: Chen, Li
name: Chen, Dan-Lei
name: Chen, Zhi-Jun
name: Kan, Li-Xin
name: Si-Ying Wang
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Evolutionary Biology
subject: Ecology
subject: Developmental Biology
subject: Marine Biology
subject: Cancer
subject: Science Policy
subject: Hematology

description: qRT-PCR analysis of miR-362-5p in 293 T cell lines transfected with a miR-362-5p mimic (mimic) or a mimic control (mimic-ctrl). **P
Additional file 2: Figure S1. of Improved genome sequencing using an engineered transposase
Creators: name: Amirali Kia
name: Gloeckner, Christian
name: Osothprarop, Trina
name: Gormley, Niall
name: Bomati, Erin
name: Stephenson, Michelle
name: Goryshin, Igor
name: He, Molly
Publisher: name: Figshare
Year: 2017
Subjects: subject: Space Science
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: Evolutionary Biology
subject: Ecology
subject: Developmental Biology

description: Normalization of tagmentation activity based on pre-PCR insertion size distribution. Activity is normalized when 20–30% of the library has an insert size of 100–300 bp, 20–30% of 301–600 bp, and at least 90% of the library falls in the range of 100 bp-7000 bp. TDE1 refers to standard Tn5 Transposme complex that comes in Nextera kit. Here, TDE1 represents standard tagmentation using Nextera kit. (PDF 54 kb)