cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Dakotas at Arnhem
Creators: name: Project Team, Their Finest Hour
Publisher: name: University of Oxford
Year: 2024
Subjects: classificationCode: 430304
subject: British history
classificationCode: 430308
subject: European history (excl. British, classical Greek and Roman)
classificationCode: 430316
subject: International history

description: During WWII, my father was in the army. During the Arnhem campaign of 1944, his unit was assigned to act as crew in a number of supply aircraft - Dakotas - to drop supplies to the Allied troops.One day over Nijmegen in the Netherlands, their plane was shot down and they were obliged to save themselves by using parachutes; thankfully, they didn't lose anyone when they did this. On landing, they were met by local people who hid them in a barn for several days. Eventually, the locals said it was safe for them to make their way towards the Allied lines, which were then quite close, so the group of soldiers duly set off on foot to make the journey. While crossing a field and with no cover of any kind, they encountered an armoured car - it was covered in dust so its marking were completely hidden and they had no idea whether it was British, American, or German. The soldiers stopped and waited - there was no point in trying to run away, since they would have been shot immediately if the vehicle was hostile. When the armoured car was close to them it stopped, the lid was thrown open and a man stuck his head out and said (in the broadest Glaswegian accent): "her, mate. d'ye see any Germans about here?"My father and his colleagues joined up with the Allied troops and made their way back to the UK. As this was happening, the War Office listed my father as Missing in Action and sent a letter to his wife (my mother) to tell her this. As luck would have it, the letter arrived at their house the same day he did!
Novel vacuum conditions in inflationary collapse models
Creators: name: Bengochea, Gabriel R.
name: León, Gabriel
Publisher: name: arXiv
Year: 2017
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Within the framework of inflationary models that incorporate a spontaneous reduction of the wave function for the emergence of the seeds of cosmic structure, we study the effects on the primordial scalar power spectrum by choosing a novel initial quantum state that characterizes the perturbations of the inflaton. Specifically, we investigate under which conditions one can recover an essentially scale free spectrum of primordial inhomogeneities when the standard Bunch-Davies vacuum is replaced by another one that minimizes the renormalized stress-energy tensor via a Hadamard procedure. We think that this new prescription for selecting the vacuum state is better suited for the self-induced collapse proposal than the traditional one in the semiclassical gravity picture. We show that the parametrization for the time of collapse, considered in previous works, is maintained. Also, we obtain an angular spectrum for the CMB temperature anisotropies consistent with the one that best fits the observational data. Therefore, we conclude that the collapse mechanism might be of a more fundamental character than previously suspected.
description: 17 pages, 2 figures. Extended and revised version. To appear in Physics Letters B
Assessing density functionals using many body theory for hybrid perovskites
Creators: name: Bokdam, Menno
name: Lahnsteiner, Jonathan
name: Ramberger, Benjamin
name: Schaefer, Tobias
name: Kresse, Georg
Publisher: name: arXiv
Year: 2017
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Which density functional is the "best" for structure simulations of a particular material? A concise, first principles, approach to answer this question is presented. The random phase approximation (RPA)--- an accurate many body theory--- is used to evaluate various density functionals. To demonstrate and verify the method, we apply it to the hybrid perovskite MAPbI$_3$, a promising new solar cell material. The evaluation is done by first creating finite temperature ensembles for small supercells using RPA molecular dynamics, and then evaluating the variance between the RPA and various approximate density functionals for these ensembles. We find that, contrary to recent suggestions, van der Waals functionals do not improve the description of the material, whereas hybrid functionals and the SCAN (strongly constrained appropriately normed) density functional yield very good agreement with the RPA. Finally, our study shows that in the room temperature tetragonal phase of MAPbI$_3$, the molecules are preferentially parallel to the shorter lattice vectors but reorientation on ps timescales is still possible.
Additional file 7 of The fiber diameter traits of Tibetan cashmere goats are governed by the inherent differences in stress, hypoxic, and metabolic adaptations: an integrative study of proteome and transcriptome
Creators: name: Zhao, Bingru
name: Wu, Cuiling
name: Sammad, Abdul
name: Ma, Zhen
name: Suo, Langda
name: Wu, Yujiang
name: Fu, Xuefeng
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 7: Figure S5. The KEGG annotation of all expressed proteins.
title: 03_0325
Creators: name: Wesley Baldwin, John
name: Baldwin, John W.
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2018
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: L'ensemble de ces notes ont été crée par John Baldwin lors d'une de ses premières périodes de résidence à Paris. Ces documents comprennent tous les magistri qu’il avait pu rencontrer dans ses sources. Aux XIIème et XIIIème siècles, les universités n'existant pas encore, le titre de magister s'il évoque certainement une compétence n'est pas rattaché de façon systématique au passage par les écoles. De surcroît, les magistris sont le plus souvent désignés par leur seul prénom. La lecture de ces données est donc difficile et suppose un long travail pour tenter d'identifier un individu auquel on pourrait rattacher plusieurs mentions. John Baldwin avait donc renoncé à utiliser ces données pour donner un prolongement à sa magnifique étude sur les gradués d'université et leur emploi par les Capétiens et les Plantagenêts. Néanmoins, il a conservé ces données et elles sont potentiellement très utile dans le cadre de Studium, comme le sont toutes les mentions dans les volumes des Fasti Ecclesiae Gallicanae de chanoines portant ce titre de magister sans autres précisions. L'ampleur des dépouillements rend ces données très utiles et nous devons une grande reconnaissance à John Baldwin pour avoir pris la peine de faire photocopier ses fiches et de nous les avoir transmises amicalement.
Les données ainsi que les images des fiches sont accessibles sur le site Internet à l'adresse suivante : http://studium-baldwin.lamop.fr/.
Les transcriptions des fiches ont été effectuées par des étudiants de Paris 1 Panthéon - Sorbonne mais elles n'ont pas été corrigées par la suite.
description: Relation: https://lamop.hypotheses.org/
Mapping the lattice-vibration potential using terahertz pulses
Creators: name: Korpa, C.
name: Toth, Gy.
name: Hebling, J.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: We develop a method for mapping the anharmonic lattice potential using the time-dependent electric field of the transmitted pulse through thin sample supported by a substrate of non-negligible thickness. Assuming linear propagation in the substrate we fully take into account internal reflection in it while the sample can show arbitrary nonlinear response. We examine the effect of frequency averaging appropriate for broad-band pulse and compare the results taking into account the full frequency dependence. We illustrate the procedure applying it to a model based on recently observed ferroelectric soft-mode nonlinearity in SrTiO$_3$.
description: 15 pages, 10 figures
Is there ethnographic evidence of Bunya Pine dispersal by Aboriginal people in eastern Australia.
Creators: name: Cooke, Patrick John
Publisher: name: Macquarie University
Year: 2024
Subjects: classificationCode: 450304
subject: Aboriginal and Torres Strait Islander environmental knowledges

description: Globally, the influence of Indigenous people on biodiversity is a growing area of interest, and the links between biological and cultural diversity are increasingly being understood, leading to global directives for biocultural conservation pursuits. This research explored the likelihood of Aboriginal dispersal of Bunya Pine on the east coast of Australia prior to and since European colonisation. The research combined first-hand interviews with Aboriginal knowledge holders with investigations of the historical literature to explore possible cultural links between the disjunct populations and cultural associations with the populations themselves. The project also navigated the complex array of biocultural protocols that were relevant to this research and guides other researchers on how they too can navigate this often complex space as both an “insider” and “outsider” of the
cultural groups. The project crossed 19 Australian Aboriginal language groups and retraces the possible pre-colonial dispersal of Bunya Pine using
ethnographic and historical knowledge. The focus of this thesis centred on field and desktop research of Bunya Pine and Chapter 2 presents original ethnographic research into the cultural associations of Aboriginal groups whose Country supported Bunya populations. Overall, this research provides clear evidence of the biocultural influence on vegetation patterns and highlights the importance of respecting Indigenous knowledge and protocols in ecological research.
Additional file 6: of Anti-tobacco control industry strategies in Turkey
Creators: name: Keklik, Seda
name: Gultekin-Karakas, Derya
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: Nominal sales revenues of cigarettes by price segment- sample (billion TL), 2005â 2012. (DOCX 14Â kb)
Systematic review and meta-analysis of the predictive accuracy of criminal risk assessment tools used at sentencing
Creators: name: Burghart, Matthias
name: Fazel, Seena
name: Yu, Rongqin
Publisher: name: Open Science Framework
Year: 2022
Subjects: subject: Psychiatry and Psychology
subject: Medicine and Health Sciences
subject: Law
subject: FOS: Law
subject: predictive validity
subject: recidivism
subject: risk assessment
subject: sentencing
subject: systematic review

description: In this systematic review, we will assess the predictive performance of commonly used risk assessment tools for crime used at the sentencing stage. We will focus on external validation studies, and those that have been conducted by independent research groups. PRISMA guidelines and comprehensive search strategies will be followed to identify relevant studies. Each tool's performance including measures of discrimination (such as AUC and C-index) and calibration will be reported, and any overall measures of reliability. We will consider heterogeneity statistically, and also in relation to outcomes, before we decide whether to meta-analyse performance measures for each tool. We will also assess the quality of the included validation studies using a standardised tool. We will look at whether study characteristics are associated with tool performance. Findings will be discussed in relation to whether and how criminal justice and mental health liaison services should use common criminal risk assessment tools. Research priorities will be presented.
A Footballer in the Royal Fusiliers
Creators: name: Project Team, Their Finest Hour
Publisher: name: University of Oxford
Year: 2024
Subjects: classificationCode: 430304
subject: British history
classificationCode: 430308
subject: European history (excl. British, classical Greek and Roman)
classificationCode: 430316
subject: International history

description: The contributor's father had been in the Royal Fusiliers and was a football player. After the war, he suffered from PTSD.
Creating Full Individual-level Location Timelines from Sparse Social Media Data
Creators: name: Rehman, Nabeel Abdur
name: Relia, Kunal
name: Chunara, Rumi
Publisher: name: arXiv
Year: 2017
Subjects: subject: Social and Information Networks (cs.SI)
subject: Computers and Society (cs.CY)
subject: FOS: Computer and information sciences
subject: J.4; G.3; I.6.0
subject: J.4, G.3, I.6.0

description: In many domain applications, a continuous timeline of human locations is critical; for example for understanding possible locations where a disease may spread, or the flow of traffic. While data sources such as GPS trackers or Call Data Records are temporally-rich, they are expensive, often not publicly available or garnered only in select locations, restricting their wide use. Conversely, geo-located social media data are publicly and freely available, but present challenges especially for full timeline inference due to their sparse nature. We propose a stochastic framework, Intermediate Location Computing (ILC) which uses prior knowledge about human mobility patterns to predict every missing location from an individual's social media timeline. We compare ILC with a state-of-the-art RNN baseline as well as methods that are optimized for next-location prediction only. For three major cities, ILC predicts the top 1 location for all missing locations in a timeline, at 1 and 2-hour resolution, with up to 77.2% accuracy (up to 6% better accuracy than all compared methods). Specifically, ILC also outperforms the RNN in settings of low data; both cases of very small number of users (under 50), as well as settings with more users, but with sparser timelines. In general, the RNN model needs a higher number of users to achieve the same performance as ILC. Overall, this work illustrates the tradeoff between prior knowledge of heuristics and more data, for an important societal problem of filling in entire timelines using freely available, but sparse social media data.
description: 10 pages, 8 figures, 2 tables
Molecular transitions as probes of the physical conditions of extragalactic environments
Creators: name: Viti, Serena
Publisher: name: arXiv
Year: 2017
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: Ab initio grids of time dependent chemical models, varying in gas density, temperature, cosmic ray ionization rate, and radiation field, are used as input to RADEX calculations. Tables of abundances, column densities, theoretical line intensities, and line ratios for some of the most used dense gas tracers are provided. The degree of correlation as well as degeneracy inherent in molecular ratios is discussed. Comparisons of the theoretical intensities with example observations are also provided. We find that, within the parameters space explored, chemical abundances can be constrained by a well defined set of gas density-gas temperature-cosmic ray ionization rate for the species we investigate here. However, line intensities, as well as, more importantly, line ratios, from different chemical models can be very similar leading to a clear degeneracy. We also find that the gas subjected to a galactic cosmic ray ionization rate will not necessarily have reached steady state by 1 Myr. The species most affected by time dependency effects are HCN and CS, both high density tracers. We use our method to fit an example set of data from two galaxies. We find that (i) molecular line ratios can be easily matched even with erroneous individual line intensities; (ii) no set of species can be matched by a one-component ISM; (iii) a species may be a good tracer of an energetic process but only under specific density and temperature conditions. We show that by taking into consideration the chemistry behind each species and the individual line intensities, many degeneracies that arise by just using molecular line ratios can be avoided. Finally we show that using a species or a ratio as a tracer of an individual energetic process (e.g. cosmic rays, UV) ought to be done with caution.
description: A&A in press (in press version will be different from this one as tables will be either in appendix or on the journal online site) This is revised version as figure was wrong
Additional file 8 of The fiber diameter traits of Tibetan cashmere goats are governed by the inherent differences in stress, hypoxic, and metabolic adaptations: an integrative study of proteome and transcriptome
Creators: name: Zhao, Bingru
name: Wu, Cuiling
name: Sammad, Abdul
name: Ma, Zhen
name: Suo, Langda
name: Wu, Yujiang
name: Fu, Xuefeng
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 8: Figure S6. Venn plot indicated the overlapped annotated proteins of GO, KEGG, and KOG database.
Proportion table to 6°, Tabule magne, recomputed by Husson (Matthieu) (2022) | Type-C (ID n° 841)
Creators: name: Husson, Matthieu
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2022
Subjects: Astronomy
History of astronomy
DISHAS
Astronomical table

description: This is a type C edition: A type-C edition is a recalculated version of a table using modern computation methods.
You can find it on the DISHAS project website from this link: https://dishas.obspm.fr/table-edition/841
title: Scolarisation musulmane. 1955-1956. Enseignement rural par territoire
title: Scolarisation musulmane. 1955-1956. Enseignement rural par territoire
Creators: name: :Unkn
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2023
Subjects: subject: Enseignement rural
subject: Enseignement musulman
subject: Ecole rurale

description: Cartographie
description: BESM-carto_1957-76-p502_76-02
description: 502
description: 76
description: Bulletin économique et social du Maroc
description: Source: Maison méditerranéenne des sciences de l'homme, Cité numérique de la Méditerranée (Cinumed), Bibliothèque nationale du Royaume du Maroc (BNRM)
description: Source: Bulletin économique et social du Maroc
description: Source: Bulletin économique et social du Maroc (BESM) > BESM (Cartographie)
description: Relation: https://cinumed.mmsh.univ-aix.fr/idurl/1/81767
description: Coverage: Maroc
description: Coverage: XXe siècle
description: Temporal: XXe siècle
description: Bibliographic citation: « Scolarisation musulmane. 1955-1956. Enseignement rural par territoire », In Bulletin économique et social du Maroc (BESM), n° 76, 1957
description: Provenance: Maison méditerranéenne des sciences de l'homme, Cité numérique de la Méditerranée (Cinumed), Bibliothèque nationale du Royaume du Maroc (BNRM)
description: Provenance: https://cinumed.mmsh.univ-aix.fr/
Production of human translation-competent lysates using dual centrifugation
Creators: name: Gurzeler, Lukas-Adrian
name: Ziegelmüller, Jana
name: Mühlemann, Oliver
name: Karousis, Evangelos D.
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: Biophysics
subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: Pharmacology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Protein synthesis is a central process in gene expression and the development of efficient in vitro translation systems has been the focus of scientific efforts for decades. The production of translation-competent lysates originating from human cells or tissues remains challenging, mainly due to the variability of cell lysis conditions. Here we present a robust and fast method based on dual centrifugation that allows for detergent-free cell lysis under controlled mechanical forces. We optimized the lysate preparation to yield cytoplasm-enriched extracts from human cells that efficiently translate mRNAs in a cap-dependent as well as in an IRES-mediated way. Reduction of the phosphorylation state of eIF2α using recombinant GADD34 and 2-aminopurine considerably boosts the protein output, reinforcing the potential of this method to produce recombinant proteins from human lysates.
Temporal Evolution of the Gamma-ray Burst Afterglow Spectrum for an Observer: GeV--TeV Synchrotron Self-Compton Light Curve
Creators: name: Fukushima, Takuma
name: To, Sho
name: Asano, Katsuaki
name: Fujita, Yutaka
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: We numerically simulate the gamma-ray burst (GRB) afterglow emission with a one-zone time-dependent code. The temporal evolutions of the decelerating shocked shell and energy distributions of electrons and photons are consistently calculated. The photon spectrum and light curves for an observer are obtained taking into account the relativistic propagation of the shocked shell and the curvature of the emission surface. We find that the onset time of the afterglow is significantly earlier than the previous analytical estimate. The analytical formulae of the shock propagation and light curve for the radiative case are also different from our results. Our results show that even if the emission mechanism is switching from synchrotron to synchrotron self-Compton, the gamma-ray light curves can be a smooth power-law, which agrees with the observed light curve and the late detection of a 32 GeV photon in GRB 130427A. The uncertainty of the model parameters obtained with the analytical formula is discussed, especially in connection with the closure relation between spectral index and decay index.
description: 11 pages, 11 figures, Accepted for publication in ApJ
Large-time behavior of solutions of parabolic equations on the real line with convergent initial data
Creators: name: Pauthier, Antoine
name: Poláčik, Peter
Publisher: name: arXiv
Year: 2017
Subjects: subject: Analysis of PDEs (math.AP)
subject: FOS: Mathematics

description: We consider the semilinear parabolic equation $u_t=u_{xx}+f(u)$ on the real line, where $f$ is a locally Lipschitz function on $\mathbb{R}.$ We prove that if a solution $u$ of this equation is bounded and its initial value $u(x,0)$ has distinct limits at $x=\pm\infty,$ then the solution is quasiconvergent, that is, all its limit profiles as $t\to\infty$ are steady states.
UVB-induced tumor heterogeneity diminishes immune response in melanoma.
Creators: name: Wolf, Yochai
name: Bartok, Osnat
name: Sushant Patkar
name: Gitit Bar Eli
name: Sapir Cohen
name: Litchfield, Kevin
name: Levy, Ronen
name: Jiménez-Sánchez, Alejandro
name: Trabish, Sophie
name: Lee, Joo Sang
name: Hiren Karathia
name: Barnea, Eilon
name: Chi-Ping Day
name: Cinnamon, Einat
name: Stein, Ilan
name: Solomon, Adam
name: Bitton, Lital
name: Pérez-Guijarro, Eva
name: Dubovik, Tania
name: Shen-Orr, Shai S
name: Miller, Martin L
name: Merlino, Glenn
name: Levin, Yishai
name: Pikarsky, Eli
name: Eisenbach, Lea
name: Admon, Arie
name: Swanton, Charles
name: Ruppin, Eytan
name: Samuels, Yardena
Publisher: name: The Francis Crick Institute
Year: 2020
Subjects: Tumour Biology
Signalling & Oncogenes
Genetics & Genomics
Genome Integrity & Repair
Human Biology & Physiology
Chemical Biology & High Throughput
Ecology,Evolution & Ethology
Computational & Systems Biology

description: Although clonal neo-antigen burden is associated with improved response to immune therapy, the functional basis for this remains unclear. Here we study this question in a novel controlled mouse melanoma model that enables us to explore the effects of intra-tumor heterogeneity (ITH) on tumor aggressiveness and immunity independent of tumor mutational burden. Induction of UVB-derived mutations yields highly aggressive tumors with decreased anti-tumor activity. However, single-cell-derived tumors with reduced ITH are swiftly rejected. Their rejection is accompanied by increased T cell reactivity and a less suppressive microenvironment. Using phylogenetic analyses and mixing experiments of single-cell clones, we dissect two characteristics of ITH: the number of clones forming the tumor and their clonal diversity. Our analysis of melanoma patient tumor data recapitulates our results in terms of overall survival and response to immune checkpoint therapy. These findings highlight the importance of clonal mutations in robust immune surveillance and the need to quantify patient ITH to determine the response to checkpoint blockade.
title: Διδακτική της βιολογίας
Creators: name: Athanasiou, Kyriakos
Publisher: name: Kallipos, Open Academic Editions
Year: 2016
Subjects: ΒΙΟΛΟΓΙΑ
ΔΙΔΑΚΤΙΚΗ
ΕΠΟΙΚΟΔΟΜΗΤΙΣΜΟΣ
ΔΙΕΡΕΥΝΗΣΗ
Biology
Teaching
Constructivism
Inquiry

description: Η επιλογή του συγγραφέα να μην εντάξει το παρόν σύγγραμμα στην ενότητα της Διδακτικής των Φυσικών Επιστημών συνιστά μία συνειδητή επιλογή, σε μια προσπάθεια διαφοροποίησης της Διδακτικής της Βιολογίας (ΔΒ) από τη συγκεκριμένη ενότητα. Η ΔΒ συνιστά ξεχωριστό επιστημονικό πεδίο με ιδιαίτερα χαρακτηριστικά που την διαφοροποιούν σε σημαντικό βαθμό από τη «Διδακτική των Φυσικών Επιστημών», όπως λ.χ. είναι η ύπαρξη «Ενοποιητικής Θεωρίας» όπως αυτής της Θεωρίας της Εξέλιξης. Φυσικά, η Βιολογία και η Διδακτική της, σε μεγάλο βαθμό ακολουθούν και συνυπάρχουν με τη Διδακτική των ΦΕ, όπου η δεσπόζουσα άποψη- Διδακτικό μοντέλο που κυριαρχεί σήμερα παγκοσμίως, είναι αυτό της Διερεύνησης και του Εποικοδομητισμού. Στα πλαίσια αυτά, στο παρόν σύγγραμμα γίνεται μια προσπάθεια να υπάρχουν δύο με τρεις ενότητες αφιερωμένες στις αντιλήψεις των μαθητών για σημαντικές ενότητες της Βιολογικής γνώσης, όπως η Εξέλιξη, η Κληρονομικότητα, η Φωτοσύνθεση. Παράλληλα, γίνεται μια προσπάθεια παρουσίασης στρατηγικών Εννοιολογικής Αλλαγής. Μιας αλλαγής, για την οποία πιστεύεται πλέον πως κατακτάται μέσα από μορφές Ενεργητικής Μάθησης και Διδασκαλίας, όπως είναι Μάθηση Μέσω Διερεύνησης (ΜΜΔ).
Θα μπορούσε κανείς να πει πως ΜΜΔ είναι η προσπάθεια μεταφοράς της Επιστημονικής Μεθόδου (ΕΜ) στη σχολική τάξη. Για το λόγο αυτό, σημαντικό μέρος του εγχειριδίου αφιερώνεται στην κατανόηση και σε εφαρμογές μεθόδων ΜΜΔ, σε σχέση με την εφαρμογή τους σε συγκεκριμένα παραδείγματα διδασκαλίας ενοτήτων της Βιολογίας. Παράλληλα, μία σε βάθος κατανόηση από τον υποψήφιο εκπαιδευτικό του τί είναι η ΕΜ και πώς συνδέεται με τις σύγχρονες τάσεις στη Διδακτική των ΦΕ και της Βιολογίας, προϋποθέτει την εξοικίωση με την Ιστορία των Επιστημών. Μια εξοικείωση που μπορεί και η ίδια να αποτελέσει εργαλείο διδασκαλίας. Ιδιαίτερα όταν κανείς ανατρέξει σε σημαντικές Επιστημονικές Διαμάχες, όπως αυτή για την Αυτόματη Γένεση, κ.α. Έτσι, μέρος του εγχειριδίου αφιερώνεται στην ενότητα αυτή
title: Phase Separation: Bridging Polymer Physics and Biology
Creators: name: Perry, Sarah L.
Publisher: name: University of Massachusetts Amherst
Year: 2019

description: Significant parallels exist between the phase separation behavior of polymers in solution and the types of biomolecular condensates, or ‘membraneless organelles,’ that are of increasing interest in living systems. Liquid-liquid phase separation allows for compartmentalization and the sequestration of materials, and can be harnessed as a sensitive strategy for responding to small changes in the environment. Here, I review many of the parallels and synergies between ongoing efforts to study and take advantage of phase separation in living vs. synthetic materials.
Accelerating Scientific Applications with the NVIDIA Grace Hopper Platform
Creators: name: Fang, Wei
Publisher: name: Zenodo
Year: 2024
Subjects: Other
HPC
AI
GPU
Accelerated Computing
ARM
Performance

description: NVIDIA GH200 Grace Hopper Superchip is a breakthrough processor designed from the ground up for giant-scale AI and HPC applications. Building on a decade of GPU acceleration, Grace-Hopper realizes NVIDIA NVLink Chip-to-chip (C2C) interconnection, with a bandwidth of 900 GB/s between the Grace CPU and the Hopper GPU. C2C enables coherent memory at 7x the bandwidth of PCIe Gen 5. This removes the conceptual CPU/GPU memory divide and lowers barriers for scientists accelerating their applications. With more application code executing on GPUs, workload performance becomes increasingly susceptible to non-GPU limiters like data movement and CPU performance (Amdahl s Law).  Grace combines 72 Arm Neoverse-V2 cores with NVIDIA Scalable Coherency Fabric (SCF), a distributed cache and mesh fabric with 3.2 TB/s bi-section bandwidth. This high bandwidth mesh enables one NUMA node for all 72 CPU cores, simplifying multi-core programming. Each core implements a 512-bit SVE2 SIMD pipeline for a total CPU FP64 theoretical peak of 7.1 teraflops. When combined with the up to 500 GB/s memory bandwidth of the LPDDR5X, Grace delivers twice the performance-per-Watt of conventional x86-64 CPUs. This session presents HPC and AI workload performance results with a technical deep-dive into the specific features of Grace-Hopper that accelerate each workload. Attendees will gain a deeper understanding of how to extract the performance offered by Grace-Hopper and realize the potential of this innovative, energy-efficient platform for science and industry.
11.3 TIB AV-Portal: Semantic Content Mining with Semi-Automatic Metadata Editing
Creators: name: Saurbier, Felix; Waitelonis, Jörg
Publisher: name: Zenodo
Year: 2017
Subjects: metadata, content mining, Germany, collections, libraries, research

description: The German National Library of Science and Technology (TIB) constantly aims to promote the use and distribution of its collections. To meet these goals, the TIB consequently foregrounds semantic web technologies, which ensure interoperability of metadata, allow for advanced methods of information retrieval (e.g. semantic and cross-lingual search), and improve the ease of access to library holdings. Accordingly, the TIB publishes its extensive metadata on scientific videos provided by the TIB AV-Portal as linked open data. This data is expressed in the standardised Resource Description Framework model (RDF) and comprises both of authoritative and automatically extracted metadata. The latter is generated through different algorithms analysing (1) superimposed text, (2) speech, and (3) visual content of the portal’s videos. In addition, the analytical results are mapped against common authority files and knowledge bases via a process of automated named entity linking (NEL) to facilitate reuse as well as interlinking of information. But publishing data in ways, which ensure interoperability and machine readability, is only one aspect of the problem. For although there are rapid advances in the field of machine learning, content mining and automated metadata extraction still pose a significant challenge to libraries. This is mainly due to different qualities in primary materials and ontologies as well as inherent ambiguities, which may impede correct detection and linking with named entities. For example, the results of automated speech recognition strongly depend on sound quality and pronunciation. Accordingly, metadata extracted by algorithms still exhibits varying degrees of accuracy. Therefore, the TIB is exploring novel ways to improve metadata, which both results from content mining and is provided as linked open data. To achieve this, a service combining direct user interaction with RDF-data and semi-automatic NEL is being developed and will be implemented in the TIB AV-Portal. On the one hand, this will allow for interactive editing, extension, and correction of the analytical metadata and enable staff and users to manually improve overall data quality. On the other hand, users will be provided with suggestions to support manual correction and expansion of the NEL results. In our presentation, we would like to introduce a possible approach for such a service ensuring the publication of high quality and interoperable metadata. In the first part we will briefly discuss our experiences with data derived by content mining/NEL and stored as RDF-triples. Based on that, common challenges of semi-automatic procedures to improve data quality and user involvement will be highlighted in greater detail in the second part of the presentation. In the concluding part, we will present possible scenarios for implementing and integrating this kind of service into the TIB AV-Portal.
title: ADCO, Premier cartulaire de l'abbaye de Molesmes (XIIe siècle), Cart. 142 (7 H 6), 128 pages, f. 0036r
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2009
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: cartulaire
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: Premier cartulaire de l'abbaye de Molesmes (XIIe siècle), Archives départementales de la Côte-d'Or, Cart. 142 (7 H 6), 128 pages, f. 0036r, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Premier cartulaire de l'abbaye de Molesmes (XIIe siècle), Archives départementales de la Côte-d'Or, Cart. 142 (7 H 6), 128 pages, f. 0036r, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb137389344
description: Provenance: abbaye de Molesme
description: Provenance: http://www.wikidata.org/entity/Q334044
A Fast Isogeometric BEM for the Three Dimensional Laplace- and Helmholtz Problems
Creators: name: Dölz, Jürgen
name: Harbrecht, Helmut
name: Kurz, Stefan
name: Schöps, Sebastian
name: Wolf, Felix
Publisher: name: arXiv
Year: 2017
Subjects: subject: Numerical Analysis (math.NA)
subject: FOS: Mathematics
subject: G.1.8; G.1.2
subject: 65M38

description: We present an indirect higher order boundary element method utilising NURBS mappings for exact geometry representation and an interpolation-based fast multipole method for compression and reduction of computational complexity, to counteract the problems arising due to the dense matrices produced by boundary element methods. By solving Laplace and Helmholtz problems via a single layer approach we show, through a series of numerical examples suitable for easy comparison with other numerical schemes, that one can indeed achieve extremely high rates of convergence of the pointwise potential through the utilisation of higher order B-spline-based ansatz functions.
Additional file 4: of NoLogo: a new statistical model highlights the diversity and suggests new classes of Crm1-dependent nuclear export signals
Creators: name: Muluye Liku
name: Elizabeth-Ann Legere
name: Moses, Alan
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Figure S2. NoLogo model parameters derived through E-M algorithm. The top panel consists of a bar graph depicting the hydrophobic position and spacer position probabilities. The bottom panel is a bar graph of the spacer length probabilities. (PDF 71Â kb)
Correlators in tensor models from character calculus
Creators: name: Mironov, A.
name: Morozov, A.
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We explain how the calculations of arXiv:1704.08648, which provided the first evidence for non-trivial structures of Gaussian correlators in tensor models, are efficiently performed with the help of the (Hurwitz) character calculus. This emphasizes a close similarity between technical methods in matrix and tensor models and supports a hope to understand the emerging structures in very similar terms. We claim that the $2m$-fold Gaussian correlators of rank $r$ tensors are given by $r$-linear combinations of dimensions with the Young diagrams of size $m$. The coefficients are made from the characters of the symmetric group $S_m$ and their exact form depends on the symmetries of the model. As the simplest application of this new knowledge, we provide simple expressions for correlators in the Aristotelian tensor model as tri-linear combinations of dimensions.
description: 9 pages
Additional file 1 of A DasA family sugar binding protein Ste2 links nutrient and oxidative stress to exopolysaccharides production in Streptomyces sp. 139
Creators: name: Geng, Mengxin
name: Ai, Limei
name: Ma, Ming
name: Li, Panpan
name: Guo, Lianhong
name: Shan, Guangzhi
name: Bai, Liping
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1.
Additional file 9: of Population-based analysis of ocular Chlamydia trachomatis in trachoma-endemic West African communities identifies genomic markers of disease severity
Creators: name: A. Last
name: H. Pickering
name: C. Roberts
name: F. Coll
name: J. Phelan
name: S. Burr
name: E. Cassama
name: M. Nabicassa
name: H. Seth-Smith
name: J. Hadfield
name: L. Cutcliffe
name: I. Clarke
name: D. Mabey
name: R. Bailey
name: T. Clark
name: N. Thomson
name: M. Holland
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Computational Biology

description: Figure S9. Ocular localization-associated SNPs (p value
Prethermalization in the cooling dynamics of an impurity in a BEC
Creators: name: Lausch, Tobias
name: Widera, Artur
name: Fleischhauer, Michael
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Other Condensed Matter (cond-mat.other)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We discuss the cooling dynamics of heavy impurity atoms in a Bose-Einstein condensate (BEC) by emission of Cherenkov phonons from scattering with the condensate. In a weakly interacting, low-temperature condensate the superfluidity of the condensate results in a separation of time-scales of the thermalization dynamics. Pre-thermalized states are formed with distinct regions of impurity momenta determined by the mass ratio of impurity and BEC atoms. This can be employed to detect the mass renormalization of the impurity upon the formation of a polaron and paves the way to preparing non-equilibrium impurity-momentum distributions.
description: 7 pages, 6 figures, 3 pages appendices
Genome-wide mutational biases fuel transcriptional diversity in the Mycobacterium tuberculosis complex
Creators: name: Chiner-Oms, Álvaro
name: Berney, Michael
name: Boinett, Christine
name: González-Candelas, Fernando
name: Young, Douglas B
name: Gagneux, Sebastien
name: Jacobs, William R
name: Parkhill, Julian
name: Cortes, Teresa
name: Comas, Iñaki
Publisher: name: The Francis Crick Institute
Year: 2020
Subjects: subject: Model organisms
subject: Infectious Disease
subject: Immunology
subject: FOS: Clinical medicine
subject: Computational & Systems Biology

description: The Mycobacterium tuberculosis complex (MTBC) members display different host-specificities and virulence phenotypes. Here, we have performed a comprehensive RNAseq and methylome analysis of the main clades of the MTBC and discovered unique transcriptional profiles. The majority of genes differentially expressed between the clades encode proteins involved in host interaction and metabolic functions. A significant fraction of changes in gene expression can be explained by positive selection on single mutations that either create or disrupt transcriptional start sites (TSS). Furthermore, we show that clinical strains have different methyltransferases inactivated and thus different methylation patterns. Under the tested conditions, differential methylation has a minor direct role on transcriptomic differences between strains. However, disruption of a methyltransferase in one clinical strain revealed important expression differences suggesting indirect mechanisms of expression regulation. Our study demonstrates that variation in transcriptional profiles are mainly due to TSS mutations and have likely evolved due to differences in host characteristics.
title: ADCO, Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Cart. 32 (G 136), 745 folios, f. 1240
Creators: name: de la Côte d'Or, Archives départementales
name: CG21/F.PETOT/2012
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: Petot, Frédéric
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Laboratoire de Médiévistique Occidentale de Paris
subject: cartulaire
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: LaMOP

description: Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Archives départementales de la Côte-d'Or, Cart. 32 (G 136), 745 folios, f. 1240, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Archives départementales de la Côte-d'Or, Cart. 32 (G 136), 745 folios, f. 1240, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
Entropy production of active particles and for particles in active baths
Creators: name: Pietzonka, Patrick
name: Seifert, Udo
Publisher: name: arXiv
Year: 2017
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: Entropy production of an active particle in an external potential is identified through a thermodynamically consistent minimal lattice model that includes the chemical reaction providing the propulsion and ordinary translational noise. In the continuum limit, a unique expression follows, comprising a direct contribution from the active process and an indirect contribution from ordinary diffusive motion. From the corresponding Langevin equation, this physical entropy production cannot be inferred through the conventional, yet here ambiguous, comparison of forward and time-reversed trajectories. Generalizations to several interacting active particles and passive particles in a bath of active ones are presented explicitly, further ones are briefly indicated.
description: 11 pages, 2 figures
Additional file 5: of Anti-tobacco control industry strategies in Turkey
Creators: name: Keklik, Seda
name: Gultekin-Karakas, Derya
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: Nominal sales revenues of cigarettes by price segment (billion TL), 2005â 2012. (DOCX 14Â kb)
Superconducting MoSi nanowires
Creators: name: Lehtinen, J. S.
name: Kemppinen, A.
name: Mykkänen, E.
name: Prunnila, M.
name: Manninen, A. J.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: We have fabricated disordered superconducting nanowires of molybdenium silicide. A molybdenium nanowire is first deposited on top of silicon, and the alloy is formed by rapid thermal annealing. The method allows tuning of the crystal growth to optimise, e.g., the resistivity of the alloy for potential applications in quantum phase slip devices and superconducting nanowire single-photon detectors. The wires have effective diameters from 42 to 79 nm, enabling the observation of crossover from conventional superconductivity to regimes affected by thermal and quantum fluctuations. In the smallest diameter wire and at temperatures well below the superconducting critical temperature, we observe residual resistance and negative magnetoresistance, which can be considered as fingerprints of quantum phase slips.
Additional file 3: of NoLogo: a new statistical model highlights the diversity and suggests new classes of Crm1-dependent nuclear export signals
Creators: name: Muluye Liku
name: Elizabeth-Ann Legere
name: Moses, Alan
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Plant Biology

description: Derivation of the E-M algorithm to estimate parameters for the NoLogo model from unaligned sequences. (DOCX 21Â kb)
A British and German Pen Pals Friendship between 1937-1943
Creators: name: Project Team, Their Finest Hour
Publisher: name: University of Oxford
Year: 2024
Subjects: classificationCode: 430304
subject: British history
classificationCode: 430308
subject: European history (excl. British, classical Greek and Roman)
classificationCode: 430316
subject: International history

description: Had a German pen-friend (Heinz) who they met in 1937. They were in the youth Luftwaffe but were killed in an accident.
Evacuees and German Jewish Refugees
Creators: name: Project Team, Their Finest Hour
Publisher: name: University of Oxford
Year: 2024
Subjects: classificationCode: 430304
subject: British history
classificationCode: 430308
subject: European history (excl. British, classical Greek and Roman)
classificationCode: 430316
subject: International history

description: A list of evacuees and German Jewish refugees in the village (Upper Basildon).