cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
A Lightweight Door into Non-grid Sites
Creators: name: Mascheroni, Marco
name: Dost, Jeffrey Michael
name: Wuerthwein, Frank
name: Sfiligoi, Igor
name: Letts, James
name: Hernandez, Edgar Fajardo
name: Gardner, Robert
name: Bryant, Lincoln
name: Stephen, Judith Lorraine
name: Cartwright, Tim
name: Lin, Brian
name: Matyas Selmeci
name: Bockelman, Brian Paul
name: Weitzel, Derek John
Publisher: name: Zenodo
Year: 2019

description: The Open Science Grid (OSG) provides a common service for resource providers and scientific institutions, and supports sciences such as High Energy Physics, Structural Biology, and other community sciences. As scientific frontiers expand, so does the need for resources to analyze new data. For example, high energy physics (LHC) sciences foresee an exponential growth in the amount of data collected, which comes with corresponding growth in the need for computing resources. Allowing resource providers an easy way to share their resources is paramount to ensure the grow of resources available to scientists. In this context, the OSG Hosted CE initiative provides site administrator a way to reduce the effort needed to install and maintain a Compute Element (CE), and represents a solution for sites who do not have the effort and expertise to run their own Grid middleware. An HTCondor Compute Element is installed on a remote VM at UChicago for each site that joins the Hosted CE initiative. The hardware/software stack is maintained by OSG Operations staff in a homogeneus and automated way, providing a reduction in the overall operational effort needed to maintain the CEs: one single organization does it in an uniform way, instead of each single resource provider doing it in their own way. Currently, more than 20 institutions joined the Hosted CE initiative. This contribution discusses the technical details behind a Hosted CE installation, highlighting key strenghts and common pitfalls, and outlining future plans to further reduce operational experience.
Correction to Brown Carbon from Photo-Oxidation of Glyoxal and SO2 in Aqueous Aerosol
Creators: name: Hawkins, Lelia N
name: Cazaunau, Mathieu
name: Cui, Tianqu
name: Pangui, Edouard
name: Surratt, Jason D
name: Pennington, Elyse A
name: De Haan, David O
name: Doussin, Jean-François
name: Wickremasinghe, Praveen D
name: Andretta, Alyssa D
name: Welsh, Hannah G
name: Dignum, Juliette R
name: De Haan, Audrey C
Publisher: name: American Chemical Society (ACS)
Year: 2023

description:
[This corrects the article DOI: 10.1021/acsearthspacechem.3c00035.].
title: Population. Recensement 1951-1952. Echelle 1/1 000 000
title: Population. Recensement 1951-1952. Echelle 1/1 000 000
Creators: name: :Unkn
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2023
Subjects: subject: Peuplement
subject: Démographie
subject: Recensement

description: Echelle 1/1 000 000
description: Cartographie
description: BESM-carto_1954-63-p366_63-01
description: 366
description: 63
description: Bulletin économique et social du Maroc
description: Source: Maison méditerranéenne des sciences de l'homme, Cité numérique de la Méditerranée (Cinumed), Bibliothèque nationale du Royaume du Maroc (BNRM)
description: Source: Bulletin économique et social du Maroc
description: Source: Bulletin économique et social du Maroc (BESM) > BESM (Cartographie)
description: Relation: https://cinumed.mmsh.univ-aix.fr/idurl/1/81637
description: Coverage: Maroc
description: Coverage: Doukkala
description: Coverage: Abda
description: Coverage: XXe siècle
description: Temporal: XXe siècle
description: Bibliographic citation: « Population. Recensement 1951-1952. Echelle 1/1 000 000 », In Bulletin économique et social du Maroc (BESM), n° 63, 1954
description: Provenance: Maison méditerranéenne des sciences de l'homme, Cité numérique de la Méditerranée (Cinumed), Bibliothèque nationale du Royaume du Maroc (BNRM)
description: Provenance: https://cinumed.mmsh.univ-aix.fr/
Witnessing galaxy preprocessing in the local Universe: the case of a star-bursting group falling into Abell 1367
Creators: name: Cortese, L.
name: Gavazzi, G.
name: Boselli, A.
name: Franzetti, P.
name: Kennicutt, R. C.
name: O'Neil, K.
name: Sakai, S.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present a multiwavelength analysis of a compact group of galaxies infalling at high speed into the dynamically young cluster Abell 1367. Peculiar morphologies and unusually high Halpha emission are associated with two giant galaxies and at least ten dwarfs/extragalactic HII regions, making this group the region with the highest density of star formation activity ever observed in the local clusters. Moreover Halpha imaging observations reveal extraordinary complex trails of ionized gas behind the galaxies, with projected lengths exceeding 150 kpc. These unique cometary trails mark the gaseous trajectory of galaxies, witnessing their dive into the hot cluster intergalactic medium. Under the combined action of tidal forces among group members and the ram-pressure by the cluster ambient medium, the group galaxies were fragmented and the ionized gas was blown out. The properties of this group suggest that environmental effects within infalling groups may have represented a preprocessing step of the galaxy evolution during the high redshift cluster assembly phase.
description: 23 pages, 13 figures, 5 table. Accepted for publication in Astronomy & Astrophysics main journal. Version with high-resolution images available at http://goldmine.mib.infn.it/papers/preprocessing.html
Programme du VIIe Festival international de folklore à Château-Gombert
Creators: name: Lancelot, Francine
name: Félibren, Lou Roudelet
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020

description: Source: http://www.calames.abes.fr/pub/ms/FileId-3413
Evolution of the WLCG Information Infrastructure
Creators: name: Andreeva, Julia
name: Girolamo, Alessandro Di
name: Forti, Alessandra
name: Anisenkov, Alexey
name: McNab, Andrew
Publisher: name: Zenodo
Year: 2019

description: The WLCG project aimed to develop, build, and maintain a global computing facility for storage and analysis of the LHC data. While currently most of the LHC computing resources are being provided by the classical grid sites, over last years the LHC experiments have been using more and more public clouds and HPCs, and this trend will certainly increase. The heterogeneity of the LHC computing resources is not limited to the procurement mode. It also implies variety of storage solutions and types of computer architecture which represent new challenges for the topology and configuration description of the LHC computing resources. The WLCG Information infrastructure has to evolve in order to meet these challenges and to be flexible enough to follow technology innovation. It should provide a complete and reliable description of all types of the storage and computing resources to ensure their effective use. This implies changes at all levels, starting from the primary information providers, through data publishing, transportation mechanism and central aggregators. The contribution describes proposed changes in the WLCG Information infrastructure, their implementation and deployment.
Universal correlations in spectra of the lattice QCD Dirac operator
Creators: name: Halasz, M. A.
name: Kalkreuter, T.
name: Verbaarschot, J. J. M.
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: Recently, Kalkreuter obtained complete Dirac spectra for $SU(2)$ lattice gauge theory both for staggered fermions and for Wilson fermions. The lattice size was as large as $12^4$. We performed a statistical analysis of these data and found that the eigenvalue correlations can be described by the Gaussian Symplectic Ensemble for staggered fermions and by the Gaussian Orthogonal Ensemble for Wilson fermions. In both cases long range spectral fluctuations are strongly suppressed: the variance of a sequence of levels containing $n$ eigenvalues on average is given by $Σ_2(n) \sim 2 (\log n)/βπ^2 $ ($β$ is equal to 4 and 1, respectively) instead of $Σ_2(n) = n$ for a random sequence of levels. Our findings are in agreement with the anti-unitary symmetry of the lattice Dirac operator for $N_c=2$ with staggered fermions which differs from Wilson fermions (with the continuum anti-unitary symmetry). For $N_c = 3$, we predict that the eigenvalue correlations are given by the Gaussian Unitary Ensemble.
description: Talk present at LATTICE96(chirality in QCD), 3 pages, Latex
Sonoluminescence as Quantum Vaccum Radiation
Creators: name: Unnikrishnan, C. S.
name: Mukhopadhyay, Shomeek
Publisher: name: arXiv
Year: 1996
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We argue that the available experimental data is not compatible with models of sonoluminescence which invoke dynamical properties of the interface without regard to the compositional properties of the trapped gas inside the bubble.
description: 2 pages,Revtex,No figures,Submitted to PRL(comments)
Erratum to “Bilateral cerebellar hemorrhagic infarcts as an early presentation following opioid-induced toxic encephalopathy in an adult patient” [Radiology Case Reports 16 (2021) 1207–1210]
Creators: name: Ahmed, Umer
name: Hung, Sheng-Che
name: Wilson, Robert
Publisher: name: Elsevier
Year: 2023

description:
[This corrects the article DOI: 10.1016/j.radcr.2021.02.073.].
Additional file 1: of Early life swimming pool exposure and asthma onset in children – a case-control study
Creators: name: Andersson, Martin
name: Backman, Helena
name: Nordberg, Gunnar
name: Hagenbjörk, Annika
name: Hedman, Linnea
name: Eriksson, Kåre
name: Forsberg, Bertil
name: Rönmark, Eva
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy
subject: Computational Biology

description: Sampling and analysis of trichloramine. (DOCX 14 kb)
Absolute Time Derivatives
Creators: name: Matolcsi, T.
name: Van, P.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: A four dimensional treatment of nonrelativistic space-time gives a natural frame to deal with objective time derivatives. In this framework some well known objective time derivatives of continuum mechanics appear as Lie-derivatives. Their coordinatized forms depends on the tensorial properties of the relevant physical quantities. We calculate the particular forms of objective time derivatives for scalars, vectors, covectors and different second order tensors from the point of view of a rotating observer. The relation of substantial, material and objective time derivatives is treated.
description: 26 pages, 4 figures (minor revision)
The involvement of matrix metalloproteinases in nicotine conditioned place preference in adolescent female rats
Creators: name: Natarajan, Reka
Publisher: name: Washington State University
Year: 2009
Subjects: Nicotine

description: The process of learning new information or modifying existing information requires synaptic plasticity in the brain. In order for these plasticity events to occur, the extracellular matrix (ECM) is reconfigured and reorganized by their primary modulators-- the matrix metalloproteinases (MMP). MMPs are a class of proteinases that are known to be involved in the learning and memory process by modulating synaptic plasticity. Our hypothesis is that MMP dependent synaptic restructuring takes place during the acquisition of drug dependent learning. We used a nicotine conditioned place preference (CPP) model to understand the underlying synaptic events that drives drug preference. There has been some debate regarding the ability of nicotine to elicit CPP in rats. Therefore the goal of the studies described in chapter 2 was to first establish that nicotine induced CPP. Our results show that nicotine produces robust, reproducible CPP at 0.03mg/kg dose using a 5 day drug administration protocol. We also observed that higher doses of nicotine produced conditioned place aversion. In chapter 3 we noted changes in the activity of MMPs - 2, 3, and 9 in the hippocampus and prefrontal cortex after conditioning. Inhibition of MMPs during nicotine conditioning interfered with the development of CPP. Elevation in MMP-3, but not MMP-2 and MMP-9 expression, accompanied re-activation of previously learnt drug related memory in both the hippocampus and the prefrontal cortex. Changes in the activity of cortactin, an actin bound cytoskeletal marker protein, were also observed during the acquisition of CPP but not following re-exposure to the drug context. These results suggest that MMPs - 2, 3, and 9 are involved in facilitating intracellular and extracellular events required for synaptic plasticity and memory consolidation while MMP-3 is uniquely involved in the reconsolidation process.
Brown Carbon from Photo-Oxidation of Glyoxal and SO2 in Aqueous Aerosol
Creators: name: Pangui, Edouard
name: De Haan, David O.
name: Cazaunau, Mathieu
name: Surratt, Jason D.
name: De Haan, Audrey C.
name: Dignum, Juliette R.
name: Cui, Tianqu
name: Pennington, Elyse A.
name: Welsh, Hannah G.
name: Andretta, Alyssa D.
name: Wickremasinghe, Praveen D.
name: Hawkins, Lelia N.
name: Doussin, Jean-François
Publisher: name: American Chemical Society (ACS)
Year: 2023

description:
Aqueous-phase dark reactions during the co-oxidation of glyoxal and S(IV) were recently identified as a potential source of brown carbon (BrC). Here, we explore the effects of sunlight and oxidants on aqueous solutions of glyoxal and S(IV), and on aqueous aerosol exposed to glyoxal and SO2. We find that BrC is able to form in sunlit, bulk-phase, sulfite-containing solutions, albeit more slowly than in the dark. In more atmospherically relevant chamber experiments where suspended aqueous aerosol particles are exposed to gas-phase glyoxal and SO2, the formation of detectable amounts of BrC requires an OH radical source and occurs most rapidly after a cloud event. From these observations we infer that this photobrowning is caused by radical-initiated reactions as evaporation concentrates aqueous-phase reactants and aerosol viscosity increases. Positive-mode electrospray ionization mass spectrometric analysis of aerosol-phase products reveals a large number of CxHyOz oligomers that are reduced rather than oxidized (relative to glyoxal), with the degree of reduction increasing in the presence of OH radicals. This again suggests a radical-initiated redox mechanism where photolytically produced aqueous radical species trigger S(IV)-O2 auto-oxidation chain reactions, and glyoxal-S(IV) redox reactions especially if aerosol-phase O2 is depleted. This process may contribute to daytime BrC production and aqueous-phase sulfur oxidation in the atmosphere. The BrC produced, however, is about an order of magnitude less light-absorbing than wood smoke BrC at 365 nm.
title: Co-regulation of the electron transport and carbon assimilation in C3 and C4 plants
title: The role of CF0-CF1 ATP synthase
titleType: Subtitle
Creators: name: Kiirats, Olavi
Publisher: name: Washington State University
Year: 2009
Subjects: Photosynthesis

description: Photosynthetic electron transport and Calvin cycle reactions need to be co-regulated in order to provide optimal flux into end product and minimize the formation of reactive oxygen species leading to photo-inhibition. An important means of dissipating excess energy is mediated by an increased acidification in the lumen of thylakoid membranes of the chloroplast which has been proposed to occur through increased photochemistry through cyclic electron flow (CEF) via photosystem (PS) I, or by linear electron flow in the Mehler reaction. We have shown that decreases in the thylakoid membrane ATP synthase conductance to protons is an important component in this dissipation of excess energy and photoprotection. It is universal and it takes place in C3 plants, as well as in all three biochemical subtypes of C4 plants. C4 plants showed a similar pattern of ATP synthase regulation to C3 plants despite the differences in photosynthetic carbon metabolism. Down-regulation of ATP synthase proton conductivity at low CO2 and high light increases intrathylakoid H+ concentration which activates the energy dissipation mechanism, thus protecting PS II. Three mutants were tested which provided support for this hypothesis: one in photochemistry (related to CEF), one in CO2 fixation (Rubisco = ribulose 1,5-bisphosphate carboxylase oxygenase), and one in carbohydrate biosynthesis (starch-less). A possible mechanism of regulating ATP-synthase conductance to protons is through the levels of inorganic phosphate (Pi) in the chloroplast stroma, since this is a substrate for the enzyme. We tested this hypothesis using a starch-less mutant. This mutant is limited in utilizing the products of photosynthesis and is considered to cause a build-up of organic-P, a depletion of Pi and feedback inhibition of photosynthesis. ATP synthase conductivity closely followed the change in activity of carbon fixation reactions, which supports the hypothesis that Pi is a regulator of ATP synthase. The low Rubisco mutant of tobacco and a mutant of Arabidopsis which affects CEF also provided support for regulation of ATP synthase conductance having a key role in photoprotection and dissipation of excess energy.
QCD with dynamical Wilson fermions at $β=5.5$
Creators: name: Bitar, K. M.
name: Edwards, R. G.
name: Heller, U. M.
name: Kennedy, A. D.
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We study QCD with two flavors of dynamical Wilson fermions at $β= 5.5$ and three values of $κ$. The corresponding pion masses are 0.375, 0.324 and 0.262 in lattice units, with pion to rho mass ratios of 0.76, 0.71 and 0.62, respectively. We use the configurations to compute the heavy quark potential, leading to lattice spacings of 0.110, 0.105 and 0.099 fm, and to compute spectroscopy for several different valence quark $κ$'s.
description: LaTex 4 pages, 4 figures. Talk presented at LATTICE96(spectrum)
Disease management and latent choices
Creators: name: Murphy, Sean Michael
Publisher: name: Washington State University
Year: 2008
Subjects: Medical economics

description: This dissertation consists of three independent essays in the field of health economics. The first essay analyzes factors influencing the initial treatment choice of inpatients with severe hypertension. A thorough analysis of treatment choice has been largely overlooked in the hypertension literature, and few studies of any disease have conducted comprehensive multivariate analyses on treatment choices using such a diverse array of socioeconomic variables and hospital locations. According to the results, characteristics other than morbidity affect the type of treatment received; indicating public policy could improve care. The second essay analyzes the effect that a patient's reference point has on her perceived effectiveness of subsequent treatment. One commonly used measure of treatment effectiveness for conditions where treatments are palliative, and clear objective symptoms do not exist, is self-reported changes in disease status. Factors such as treatment history provide a reference point that may influence patients' expectations of how effective further treatment might be. Therefore, decisions about whether to proceed with additional treatment, as well as perceptions of how effective that treatment is, may be influenced by this point. Although there is an extensive literature on how patient expectations influence treatment outcomes, work testing how expectations depend on these reference point factors appears to be missing. The results indicate that these factors influence perceived treatment effectiveness. The final essay focuses on missing and ambiguous observations in a dataset with binary dependent variables. The ability to reallocate these responses could aid in the correction of potentially biased estimates. Using the "latent-choice multinomial logit model" (LCMNL), it is possible to determine whether these incomplete responses are more likely to belong to another outcome. Simulations of this model are performed to determine whether the estimated conditional probabilities are accurate enough to evaluate the likelihood that any given observation belongs to a particular outcome, and whether doing so improves parametric estimation. Tests imply that the reclassifications indicated by the LCMNL's conditional probabilities are accurate. The best method for dealing with ambiguous observations in empirical analysis is also assessed. Results indicate that the best method depends on the source of the ambiguity
Molecular basis for Eaf3-mediated assembly of Rpd3S and NuA4
Creators: name: Strahl, Brian D.
name: Yao, Xuebiao
name: Chen, Zhenzhen
name: Zhang, Jiahai
name: Hoskins, Victoria E.
name: Xu, Chao
name: Zhu, Zhongliang
name: Lundy, Taylor
Publisher: name: Springer Nature
Year: 2023

description:
Dear Editor,

In Saccharomyces cerevisiae, reduced potassium dependency-3 (Rpd3) resides in two distinct histone deacetylase complexes, termed Rpd3S and Rpd3L. The Rpd3S complex functions to repress transcriptional initiation within the coding region of genes during RNA polymerase II elongation by maintaining hypoacetylation. Eaf3 and Rco1 are unique members of Rpd3S. Eaf3 binds to di- and tri-methylation of histone H3 at lysine 36 (H3K36me2/3) via its N-terminal chromo barrel domain (Eaf3CBD)5, and it also resides in the NuA4 histone acetyltransferase complex. Rco1 recognizes unmodified H3K4 (H3K4me0) via its PHD1 domain and associates with Eaf3 to enhance the Eaf3–H3K36me3 interaction. Thus, H3K4me0 and H3K36me recognition by Rpd3S enforces the targeting and activity of Rpd3S within gene bodies that are rich in H3K36 methylation but depleted in H3K4 methylation. However, the underlying molecular mechanisms of Eaf3–Rco1 interaction are largely unknown.
Dynamic integration of distributed, Cloud-based HPC and HTC resources using JSON Web Tokens and the INDIGO IAM Service
Creators: name: Ceccanti, Andrea
name: Spiga, Daniele
name: Salomoni, Davide
name: Alfieri, Roberto
name: Pra, Stefano Dal
Publisher: name: Zenodo
Year: 2019

description: In the last couple of years, we have been actively developing the Dynamic On-Demand Analysis Service (DODAS) as an enabling technology to deploy container-based clusters over any Cloud infrastructure with almost zero effort. The DODAS engine is driven by high-level templates written in the TOSCA language, that allows to abstract the complexity of many configuration details. DODAS is particularly suitable for harvesting opportunistic computing resources; this is why several scientific communities already integrated their computing use cases into DODAS-instantiated clusters automating the instantiation, management and federation of HTCondor batch system. The increasing demand, availability and utilization of HPC by and for multidisciplinary user community, often mandates the possibility to transparently integrate, manage and mix HTC and HPC resources. In this paper, we discuss our experience extending and using DODAS to connect HPC and HTC resources in the context of a distributed Italian regional infrastructure involving multiple sites and communities. In this use case, DODAS automatically generates HTCondor-based clusters on-demand, dynamically and transparently federating sites that may also include HPC resources managed by SLURM; DODAS allows user workloads to make opportunistic and automated use of both HPC and HTC resources, thus effectively maximizing and optimizing resource utilization. We also report on our experience of using and federating HTCondor batch systems exploiting the JSON Web Token capabilities introduced in recent HTCondor versions, replacing the traditional X509 certificates in the whole chain of workload authorization. In this respect we also report on how we integrated HTCondor using OAuth with the INDIGO IAM service.
title: Signal detection on two-dimensional intersymbol interference channels
title: correlated sources and reduced complexity algorithms
titleType: Subtitle
Creators: name: Zhu, Ying
Publisher: name: Washington State University
Year: 2008
Subjects: Signal detection

description: In this dissertation, we present a novel iterative algorithm for detection of binary-valued
description: 2D Markov Random Fields (MRFs) corrupted by 2D intersymbol interference (ISI) and
description: additive white Gaussian noise (AWGN). We assume a first-order binary MRF as a simple
description: model for correlated images. We also assume a 2D digital storage channel, where the MRF
description: is interleaved before being written and then read by a 2D transducer; such channels occur
description: in recently proposed optical disk storage systems. The detection algorithm is a concatenation
description: of two soft-input/soft-output (SISO) detectors: an iterative row-column soft-decision feedback (IRCSDF) ISI detector, and a MRF detector. For the 2 £ 2 averaging mask ISI channel, at a bit error rate (BER) of 10¡5, the concatenated algorithm achieves SNR savings up to 2.0 dB over the IRCSDF detector alone; the savings increase as the MRFs become more correlated, or as the SNR decreases. The algorithm is also fairly robust to mismatches between the assumed and actual MRF parameters. The complexity of Bahl-Cocke-Jelinek-Raviv (BCJR) algorithms grows exponentially with the size of the ISI mask and is an important concern with their implementation. We consider BCJR-like iterative detection algorithms for 1D and 2D binary-input ISI channels with AWGN. The proposed new technique reduces the complexity of BCJR algorithms by decreasing the effective number of states in the trellis. It does particularly well for
description: mixed phase sequence ISI masks, which have higher weights for the center taps and lower weights for the peripheral taps. Other complexity reduction techniques proposed in the literature perform poorly for such masks. Moreover, the complexity of the proposed state reduction technique is comparable to other reduced complexity techniques reported in the literature. Experimental results are provided to demonstrate the advantages of the proposed state reduction technique. This dissertation also addresses the problem of equivalent masks for 4-ary and binary
description: modulation at the same areal density. The ML bounds for these masks show that when the point spread function (PSF) is more spread, the performance of 4-ary modulation can be better than binary modulation on 2D ISI channels.
Correction to: Comparison of fracture risk assessment tools in older men without prior hip or spine fracture: the MrOS study
Creators: name: Fine, Jason P.
name: Lane, Nancy E.
name: Lapidus, Jodi A.
name: Schousboe, John T.
name: Kado, Deborah M.
name: Orwoll, Eric S.
name: Ensrud, Kristine E.
name: Ritter, Victor S.
name: Nguyen, Tuan V.
name: Cawthon, Peggy M.
name: Diem, Susan J.
name: Overman, Robert A.
name: Cummings, Steven R.
name: Gourlay, Margaret L.
Publisher: name: Springer Nature
Year: 2023

description:
Correction to: "Comparison of fracture risk assessment tools in older men without prior hip or spine fracture: the MrOS study"
High-velocity decision-making and the results of task-technology misfit
Creators: name: Ladd, Darin Alan
Publisher: name: Washington State University
Year: 2010
Subjects: Decision making

description: This dissertation inspected decision-making under high-velocity conditions in three manuscripts. First, it investigated how decision processes and firm strategy evolve when a low-velocity industry is met with high-velocity stimulus. Second, it investigated the results of task-technology misfit on decisionmaking under high-velocity conditions. Finally, it investigated high-velocity decision support system requirements, proposing a high-velocity decision support system evaluation framework. Key Words: Decision-making, task-technology fit, faithful appropriation, over-appropriation, trust, decision quality, performance outcomes, grounded theory.
Author Correction: Molecular basis for Eaf3-mediated assembly of Rpd3S and NuA4
Creators: name: Strahl, Brian D.
name: Hoskins, Victoria E.
name: Yao, Xuebiao
name: Chen, Zhenzhen
name: Xu, Chao
name: Lundy, Taylor
name: Zhu, Zhongliang
name: Zhang, Jiahai
Publisher: name: Springer Nature
Year: 2023

description:
Correction to: "Molecular basis for Eaf3-mediated assembly of Rpd3S and NuA4"
Status of the Belle II simulation library
Creators: name: Kim, Doris Yangsoo
name: The Belle II Simulation Group
Publisher: name: Zenodo
Year: 2019

description: The SuperKEKB collider and the Belle II experiment started Phase III at the beginning of 2019. The run is designed to collect a data sample of up to 50/ab at the collision energy of the Upsilon(4S) resonance for the next decade. The Belle II software library is created to ensure the accuracy and efficiency needed to accomodate this next generation B factory experiment. The central component of the Belle II simulation library is Geant4, which is one of the most popular software packages used by high energy experiments. In this talk, we will summarize the current status of the simulation library and will review the efforts to optimize the Geant4 functionalities in the Belle II specific environment. The discussed topics will include the optimization of the physics list and upgrade to Geant4 version 10.5.
Space-efficient classical and quantum algorithms for the shortest vector problem
Creators: name: Chen, Yanlin
name: Chung, Kai-Min
name: Lai, Ching-Yi
Publisher: name: arXiv
Year: 2017
Subjects: subject: Data Structures and Algorithms (cs.DS)
subject: Quantum Physics (quant-ph)
subject: FOS: Computer and information sciences
subject: FOS: Physical sciences

description: A lattice is the integer span of some linearly independent vectors. Lattice problems have many significant applications in coding theory and cryptographic systems for their conjectured hardness. The Shortest Vector Problem (SVP), which is to find the shortest non-zero vector in a lattice, is one of the well-known problems that are believed to be hard to solve, even with a quantum computer. In this paper we propose space-efficient classical and quantum algorithms for solving SVP. Currently the best time-efficient algorithm for solving SVP takes $2^{n+o(n)}$ time and $2^{n+o(n)}$ space. Our classical algorithm takes $2^{2.05n+o(n)}$ time to solve SVP with only $2^{0.5n+o(n)}$ space. We then modify our classical algorithm to a quantum version, which can solve SVP in time $2^{1.2553n+o(n)}$ with $2^{0.5n+o(n)}$ classical space and only poly(n) qubits.
title: Experimental pain in hypnosis research
title: Ischemic vs transcutaneous electrical nerve stimulation (TENS)
titleType: Subtitle
Creators: name: Green, Seth A.
Publisher: name: Washington State University
Year: 2009
Subjects: Transcutaneous Electric Nerve Stimulation

description: The purpose of this study was to compare two types of experimental pain typically used in hypnosis research: transcutaneous electrical nerve stimulation (TENS) and ischemia on the basis of how closely each approximates clinical pain. Approximation reports were obtained using a semantic differential measure (Osgood, Suci, & Taunenbaum, 1950) in both awake and hypnosis conditions. This study also tested whether high hypnotizables differ in their ability to manage pain induced by TENS as compared to ischemic pain. The final sample was comprised of 50 participants in both pain conditions. Hypnotizability was assessed by the Stanford Hypnotic Clinical Scale (Morgan & Hilgard, 1975). Analyses showed that in the awake state TENS pain failed to closely approximate clinical pain versus ischemic pain. However, in the hypnotic state TENS pain was shown to more closely approximate clinical pain in contrast to ischemic pain. Analyses also revealed that high hypnotizables differ significantly in their ability to manage pain induced by TENS in contrast to ischemic pain. However, consistent with the literature, hypnosis was shown to significantly reduce pain perception versus the same level of painful stimulation in awake conditions.
Predicting Facebook Privacy Behaviour
Creators: name: Smith, Joanne
name: Biber, Mustafa
name: Louis, Winnifred R
Publisher: name: OSF Registries
Year: 2024
Subjects: subject: Social and Behavioral Sciences

description: The study aims to understand online privacy protection behaviour in Facebook users using an extended theory of the planned behaviour model that adds descriptive norms, risk, and trust to the model. Initial research on this topic was conducted by Saeri and colleagues (2014), who found that injunctive norms, descriptive norms, and perceived risk were an important predictor of online privacy intentions. Furthermore, research results showed that there were no significant effects of trust on online privacy protection, but they suggested that the measure they used may explain these effects. Since 2014, many innovations have entered the lives of Facebook users, and Facebook has featured negatively in news headlines in relation to privacy (e.g., Cambridge Analytica scandal). In light of this, we will attempt to replicate and update Saeri et al. (2014). First, given new standards in relation to power and sample size, we plan to double the sample size (from 119 to 240). Second, most research on Facebook privacy, including Saeri et al., has typically used young people as the target population: our aim is to collect a broader sample of ages in the current study. Overall, the present research will fix some limitations of Saeri and colleagues (2014) research and contribute literature with a broader sample.
title: Pigmented potatoes on health
title: Effect on oxidative stress, inflammatory damage and immune response in humans, sensory attributes, and nutrient retention during processing
titleType: Subtitle
Creators: name: Kaspar, Kerrie L.
Publisher: name: Washington State University
Year: 2009
Subjects: Potatoes

description: The possible health benefits of pigmented potatoes are unknown. In experiment 1, healthy male participants were fed 150 g/d of one of the following for 6 wk: 1) white (WP), 2) yellow (YP), or 3) purple-fleshed (PP) potatoes for 6 wk. Blood samples were analyzed for oxidative stress, inflammatory damage and immune biomarkers. The DNA damage was lower (P < 0.05) in YP or PP compared to WP group. Blood C - reactive protein (CRP) and IL-6 were lower (P < 0.08) in PP than WP. Subjects in YP had lower (P < 0.08) IL-6 and tended to have lower (P > 0.1) CRP than WP. Percent of total Tc cells were lower (P < 0.04) while B cells were higher in PP than in WP (P < 0.05). Experiment 2 compared drum drying (DD), freeze drying (FD) and Refractance Window drying (RW) on the retention of bioactive compounds in white (WP), yellow (YP), red (RP) and purple potatoes (PP). The DD increased (P <0.001) the amount of phenolics in WP. All drying methods decreased (P <0.001) anthocyanins by 29-67% in RP and PP; FD retained more (P <0.001) anthocyanins compared to the other methods. Drying decreased (P <0.01) carotenoids by 31-52% in YP; no significant differences were found among processing methods. While drying decreased (P <0.001) total antioxidant activity of YP, RP and PP by 50-71%, drying increased (P <0.001) antioxidant activity in WP by 58-108%. Overall, FD and RW methods resulted in the least destruction of bioactive compounds in potatoes. In experiment 3, rank-sum sensory acceptance was performed by 60 untrained panelists for aroma, appearance, flavor and overall perception of WP, YP and PP. The PP was the least favorable (P < 0.05) for aroma and appearance attributes. However, no significant differences were seen for overall perception. In conclusion, consumption of yellow and purple pigmented potatoes reduced inflammation, DNA damage, and modulates immune cell response in males. No significant differences were observed among potatoes for overall acceptance. Drying significantly affected the concentration of bioactive molecules and should be considered with reference to the antioxidant class intended to be optimized.
Correction: The Systems Analysis and Improvement Approach: specifying core components of an implementation strategy to optimize care cascades in public health
Creators: name: Nduati, Ruth
name: Eastment, McKenna
name: Banek, Kristin
name: Cumbe, Vasco
name: Muanido, Alberto
name: Wanje, George
name: Wagner, Anjuli
name: Sherr, Kenneth
name: Dinis, Aneth
name: Njuguna, Irene N.
name: Hazim, Carmen
name: Lambdin, Barrot H.
name: Crocker, Jonny
name: Ásbjörnsdóttir, Kristjana
name: Coutinho, Joana
name: Uetela, Onei
name: Gaitho, Douglas
name: Mocumbi, Ana Olga
name: Borges, Madeline
name: Gimbel, Sarah
name: McClelland, R. Scott
name: Pope, Stephen
name: Wagenaar, Bradley H.
Publisher: name: Springer Nature
Year: 2023

description:
Correction to: "The Systems Analysis and Improvement Approach: specifying core components of an implementation strategy to optimize care cascades in public health"
The interaction of gravitational waves with strongly magnetized plasmas
Creators: name: Isliker, H.
name: Vlahos, L.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We study the interaction of a gravitational wave (GW) with a plasma that is strongly magnetized. The GW is considered a small disturbance, and the plasma is modeled by the general relativistic analogue of the induction equation of ideal MHD and the single fluid equations. The equations are derived without neglecting any of the non-linear interaction terms, and the non-linear equations are integrated numerically. We find that for strong magnetic fields of the order of $10^{15} $G the GW excites electromagnetic plasma waves very close to the magnetosonic mode. The magnetic and electric field oscillations have very high amplitude, and a large amount of energy is absorbed from the GW by the electromagnetic oscillations, of the order of $10^{23} $erg/cm$^3$ in the case presented here. The absorbed energy is proportional to $B_0^2$, with $B_0$ the background magnetic field. The energization of the plasma takes place on fast time scales of the order of milliseconds. The amount of absorbed energy is comparable to the energies emitted in the most energetic astrophysical events, such as giant flares on magnetars and possibly even short Gamma ray bursts (GRB), for which the mechanism analyzed here also has the fast time-scales required.
description: 5 pages, 7 figures, Eq. (7) and corresponding text is modified
Additional file 1 of Finding high posterior density phylogenies by systematically extending a directed acyclic graph
Creators: name: Jennings-Shaffer, Chris
name: Rich, David H.
name: Macaulay, Matthew
name: Karcher, Michael D.
name: Ganapathy, Tanvi
name: Kiami, Shosuke
name: Kooperberg, Anna
name: Zhang, Cheng
name: Suchard, Marc A.
name: Matsen, Frederick A.
Publisher: name: figshare
Year: 2025
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Evolutionary Biology
subject: Ecology
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Supplementary file 1.
Classifications of Twin Star Solutions for a Constant Speed of Sound Parameterized Equation of State
Creators: name: Christian, Jan-Erik
name: Zacchi, Andreas
name: Schaffner-Bielich, Jürgen
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: We explore the possible mass radius relation of compact stars for the equation of states with a first order phase transition. The low density matter is described by a nuclear matter equation of state resulting from fits to nuclear properties. A constant speed of sound parametrization is used to describe the high density matter phase with the speed of sound $c_s^2=1$. A classification scheme of four distinct categories including twin star solutions, i. e. solutions with the same mass but differing radii, is found which are compatible with the $M \ge 2M_\odot$ pulsar mass constraint. We show the dependence of the mass and radius differences on the transition parameters and delineate that higher twin star masses are more likely to be accompanied by large radius differences. These massive twin stars are generated by high values of the discontinuity in the energy density and the lowest possible values of the transition pressure that still result in masses of $M \geq 2M_\odot$ at the maximum of the hadronic branch.
description: 8 pages, 9 figures
Magnetic Pressure as the Driver of Electric Energy: A New Framework for Understanding Turbulence
Creators: name: Wilcox, Clyde Jermaine
Publisher: name: Zenodo
Year: 2025

description: This paper introduces a novel framework that positions magnetic pressure as the fundamental driver behind electric energy, ultimately governing turbulent behavior. Traditionally, turbulence has been analyzed through fluid dynamics and kinetic energy, with limited focus on the role of electromagnetic fields. This work argues that turbulence emerges when magnetic pressure overwhelms electric energy, leading to chaotic fluctuations. The framework unifies electromagnetic and fluid dynamic views, offering fresh insights into energy transfer, magnetic-electric interactions, and the fundamental nature of turbulence. By challenging traditional mechanical models, this paper opens the door to new research opportunities in fields ranging from plasma physics to atmospheric sciences, with potential applications in energy production, turbulence control, and space exploration.

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Representation of Complex Probabilities
Creators: name: Salcedo, L. L.
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Let a ``complex probability'' be a normalizable complex distribution $P(x)$ defined on $\R^D$. A real and positive probability distribution $p(z)$, defined on the complex plane $\C^D$, is said to be a positive representation of $P(x)$ if $\langle Q(x)\rangle_P = \langle Q(z)\rangle_p$, where $Q(x)$ is any polynomial in $\R^D$ and $Q(z)$ its analytical extension on $\C^D$. In this paper it is shown that every complex probability admits a real representation and a constructive method is given. Among other results, explicit positive representations, in any number of dimensions, are given for any complex distribution of the form Gaussian times polynomial, for any complex distributions with support at one point and for any periodic Gaussian times polynomial.
description: REVTeX, 15 pages, no figures, uuencoded
Additional file 6 of Single-cell resolution analysis reveals the preparation for reprogramming the fate of stem cell niche in cotton lateral meristem
Creators: name: Zhu, Xiangqian
name: Xu, Zhongping
name: Wang, Guanying
name: Cong, Yulong
name: Yu, Lu
name: Jia, Ruoyu
name: Qin, Yuan
name: Zhang, Guangyu
name: Li, Bo
name: Yuan, Daojun
name: Tu, Lili
name: Yang, Xiyan
name: Lindsey, Keith
name: Zhang, Xianlong
name: Jin, Shuangxia
Publisher: name: figshare
Year: 2023
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 6. Review history.
Autoencoder Node Saliency: Selecting Relevant Latent Representations
Creators: name: Fan, Ya Ju
Publisher: name: arXiv
Year: 2017
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Machine Learning (cs.LG)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: The autoencoder is an artificial neural network model that learns hidden representations of unlabeled data. With a linear transfer function it is similar to the principal component analysis (PCA). While both methods use weight vectors for linear transformations, the autoencoder does not come with any indication similar to the eigenvalues in PCA that are paired with the eigenvectors. We propose a novel supervised node saliency (SNS) method that ranks the hidden nodes by comparing class distributions of latent representations against a fixed reference distribution. The latent representations of a hidden node can be described using a one-dimensional histogram. We apply normalized entropy difference (NED) to measure the "interestingness" of the histograms, and conclude a property for NED values to identify a good classifying node. By applying our methods to real data sets, we demonstrate the ability of SNS to explain what the trained autoencoders have learned.
Investigation of continuous-time quantum walk on root lattice $A_n$ and honeycomb lattice
Creators: name: Jafarizadeh, M. A.
name: Sufiani, R.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: The continuous-time quantum walk (CTQW) on root lattice $A_n$ (known as hexagonal lattice for $n=2$) and honeycomb one is investigated by using spectral distribution method. To this aim, some association schemes are constructed from abelian group $Z^{\otimes n}_m$ and two copies of finite hexagonal lattices, such that their underlying graphs tend to root lattice $A_n$ and honeycomb one, as the size of the underlying graphs grows to infinity. The CTQW on these underlying graphs is investigated by using the spectral distribution method and stratification of the graphs based on Terwilliger algebra, where we get the required results for root lattice $A_n$ and honeycomb one, from large enough underlying graphs. Moreover, by using the stationary phase method, the long time behavior of CTQW on infinite graphs is approximated with finite ones. Also it is shown that the Bose-Mesner algebras of our constructed association schemes (called $n$-variable $P$-polynomial) can be generated by $n$ commuting generators, where raising, flat and lowering operators (as elements of Terwilliger algebra) are associated with each generator. A system of $n$-variable orthogonal polynomials which are special cases of \textit{generalized} Gegenbauer polynomials is constructed, where the probability amplitudes are given by integrals over these polynomials or their linear combinations. Finally the suppersymmetric structure of finite honeycomb lattices is revealed. Keywords: underlying graphs of association schemes, continuous-time quantum walk, orthogonal polynomials, spectral distribution. PACs Index: 03.65.Ud
description: 41 pages, 4 figures
Additional file 2: of Tracing the evolution of the heterotrimeric G protein Îą subunit in Metazoa
Creators: name: A. Lokits
name: H. Indrischek
name: J. Meiler
name: H. Hamm
name: P. Stadler
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Marine Biology
subject: Cancer
subject: Plant Biology

description: Supplemental fileÂ 1. Maximum Likelihood Tree of (pre)GNA- genes. ML tree built with all paralogs and sequences evaluated in Nexml format. Bootstrapped replicates were summarized into Extended Majority Rule Consensus Trees and reported with bootstrap (BS) values. (PDF 4751Â kb)