cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Amplicon Sequencing of Targeted X-chromosomes in Sperm and Daughters - An. gambiae
Creators: name: Haber, Daniella An
name: Arien, Yael
name: Lamdan, Lee Benjamin
name: Alcalay, Yehonathan
name: Zecharia, Chen
name: Krsticevic, Flavia
name: Yonah, Elad Shmuel
name: Avraham, Rotem Daniel
name: Krzywinska, Elzbieta
name: Krzywinski, Jaroslaw
name: Marois, Eric
name: Windbichler, Nikolai
name: Papathanos, Philippos Aris
Publisher: name: figshare
Year: 2024
Subjects: classificationCode: 310113
subject: Synthetic biology
classificationCode: 300104
subject: Genetically modified animals

description: Supporting data for the Amplicon sequencing analysis of testes, terminal segments, and surviving daughters, as detailed in the submission 'Targeting Mosquito X-Chromosomes Reveals Complex Transmission Dynamics of Sex Ratio Distorting Gene Drives.This item consists of:Alleles_frequency_table_around_sgRNA: CRISPResso2 outputs describing the alleles frequency around relevant sgRNAs per sample. T = Testes sample, Fem = Surviving Females sample, TerminalSegments = Terminal Segments sample.edited_alleles_frequency_around_sgRNAs: Datasets summarizing the frequency of unique alleles not matching the native sgRNA target sites in either terminal segments or testes. This data was obtained by removing alleles with a perfect match to reference sgRNA sequence, as well as alleles that appear less than 10 times in the dataset.Python Script: The scripts used to generate the final figures.Generated Figures: The visual representations produced by the Python script.CRISPRalleles: The frequencies of unique alleles not matching the native sgRNA target sites or any alleles found in wild type samples in either surviving females or testes. This data was obtained by removing alleles with either a perfect match to reference sgRNA sequence or that are found in wild type samples, as well as alleles that appear less than 10 times in the dataset. T = Testes sample, Fem = Surviving Females sample.Raw sequencing data is available at NCBI's SRA, under the accession PRJNA1070274 (https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1070274).
Large Deviations for the density and the current in Non-Equilibrium-Steady-States on disordered rings
Creators: name: Monthus, Cecile
Publisher: name: arXiv
Year: 2018
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: The so-called 'Level 2.5' general result for the large deviations of the joint probability of the density and of the currents for Markov Jump processes is applied to the case of $N$ independent particles on a ring with random transition rates. We first focus on the Directed Trap model, where the contractions needed to obtain the large deviations properties of the density alone and of the current alone can be explicitly written in each disordered sample, and where the deformed Markov operator needed to evaluate the generating function of the current can be also explicitly analyzed via its highest eigenvalue and the corresponding left and right eigenvectors. We then turn to the non-directed model, where the tails for large currents $ j \to \pm \infty$ of the rate function for the current alone can still be studied explicitly, either via contraction or via the deformed Markov operator method. We mention the differences with the large deviations properties of the Fokker-Planck dynamics on disordered rings.
description: v2=revised version (14 pages)
Subgroup growth of right-angled Artin and Coxeter groups
Creators: name: Baik, Hyungryul
name: Petri, Bram
name: Raimbault, Jean
Publisher: name: arXiv
Year: 2018
Subjects: subject: Group Theory (math.GR)
subject: Geometric Topology (math.GT)
subject: FOS: Mathematics
subject: 20F55, 20F36, 57M50, 20B99

description: We determine the factorial growth rate of the number of finite index subgroups of right-angled Artin groups as a function of the index. This turns out to depend solely on the independence number of the defining graph. We also make a conjecture for right-angled Coxeter groups and prove that it holds in a limited setting.
description: 34 pages
Gauge-Invariant Variables Reveal the Quantum Geometry of Fractional Quantum Hall States
Creators: name: Chen, YingKang
name: Biswas, Rudro R.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: Herein, we introduce the framework of gauge invariant variables to describe fractional quantum Hall (FQH) states, and prove that the wavefunction can always be represented by a unique holomorphic multi-variable complex function. As a special case, within the lowest Landau level, this function reduces to the well-known holomorphic coordinate representation of wavefunctions in the symmetric gauge. Using this framework, we derive an analytic guiding center Schrödinger's equation governing FQH states; it has a novel structure. We show how the electronic interaction is parametrized by generalized pseudopotentials, which depend on the Landau level occupancy pattern; they reduce to the Haldane pseudopotentials when only one Landau level is considered. Our formulation is apt for incorporating a new combination of techniques, from symmetric functions, Galois theory and complex analysis, to accurately predict the physics of FQH states using first principles.
Additional file 2 of Comprehensive analysis of m6A related gene mutation characteristics and prognosis in colorectal cancer
Creators: name: Jiang, Tao
name: Xing, Linshuai
name: Zhao, Lipeng
name: Ye, Ziqi
name: Yu, Dong
name: Lin, Shengtao
Publisher: name: figshare
Year: 2023
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 2. FMR1: Analysis of the correlation between m6a regulators and clinical stage. Results of correlation between FMR1 and clinical stage (p > 0.05).
MOESM3 of Specificity of the IgG antibody response to Plasmodium falciparum, Plasmodium vivax, Plasmodium malariae, and Plasmodium ovale MSP119 subunit proteins in multiplexed serologic assays
Creators: name: Priest, Jeffrey
name: Plucinski, Mateusz
name: Huber, Curtis
name: Rogier, Eric
name: Bunsoth Mao
name: Gregory, Christopher
name: Candrinho, Baltazar
name: Colborn, James
name: Barnwell, John
Publisher: name: figshare
Year: 2018
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Additional file 3. Additional MSP119 competition assay results using sera from a high malaria incidence setting.
Additional file 3 of Comprehensive analysis of m6A related gene mutation characteristics and prognosis in colorectal cancer
Creators: name: Jiang, Tao
name: Xing, Linshuai
name: Zhao, Lipeng
name: Ye, Ziqi
name: Yu, Dong
name: Lin, Shengtao
Publisher: name: figshare
Year: 2023
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 3. IGF2BP1: Analysis of the correlation between m6a regulators and clinical stage. Results of correlation between IGF2BP1 and clinical stage (p > 0.05).
MOESM2 of Effects of pH on steam explosion extraction of acetylated galactoglucomannan from Norway spruce
Creators: name: Michalak, Leszek
name: Knutsen, Svein
name: Aarum, Ida
name: Bjørge Westereng
Publisher: name: figshare
Year: 2018
Subjects: subject: Biophysics
subject: Molecular Biology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Inorganic Chemistry
subject: Plant Biology

description: Additional file 2: Figure S2. MALDI-ToF spectra of extracted oligosaccharides samples from all treatment. Relative intensities show the most prevalent oligosaccharide sizes to be in the 1000–1500 m/z range (DP6-DP9 for hexoses) and highly acetylated in the control and citrate pH 4.0 samples. In further treatments the hexose peaks are gradually replaced with xylooligosaccharide peaks at much higher intensities and with no acetylations. The peak at 723 m/z is a persistent contamination.
Dynamics of coherence-induced state ordering under Markovian channels
Creators: name: Yang, Long-Mei
name: Chen, Bin
name: Fei, Shao-Ming
name: Wang, Zhi-Xi
Publisher: name: arXiv
Year: 2018
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We study the dynamics of coherence-induced state ordering under incoherent channels, particularly four specific Markovian channels: $-$ amplitude damping channel, phase damping channel, depolarizing channel and bit flit channel for single-qubit states. We show that the amplitude damping channel, phase damping channel, and depolarizing channel do not change the coherence-induced state ordering by $l_1$ norm of coherence, relative entropy of coherence, geometric measure of coherence, and Tsallis relative $α$-entropies, while the bit flit channel does change for some special cases.
description: 7 pages, 21 figures
Oeneis glacialis
Creators: name: Bonelli, Simona
name: Barbero, Francesca
name: Casacci, Luca Pietro
name: Cerrato, Cristiana
name: Balletto, Emilio
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Nymphalidae
Oeneis
Oeneis glacialis

description: Oeneis glacialis (Moll, 1783)
Papilio glacialis Moll, 1783: 102.
FIRST RECORD FOR THE VALDIERI AREA. — Turati & Verity (1911).
CHOROTYPE. — Alpine.
ECOLOGY. — Screes, subalpine-alpine, mesophilous, xerophilous.
EDIT PROJECT SAMPLING. — Fishing reserve Cappello di Napoleone, Beech-wood clearings, 1300 m, VI.2009; Valasco, Hygrophilous grassland 1750 m, VI.2009, CS.
description: Published as part of Bonelli, Simona, Barbero, Francesca, Casacci, Luca Pietro, Cerrato, Cristiana & Balletto, Emilio, 2015, The butterfly fauna of the Italian Maritime Alps: results of the EDIT project, pp. 139-167 in Zoosystema 37 (1) on page 161, DOI: 10.5252/z2015n1a6, http://zenodo.org/record/5154896
Additional file 4 of Comprehensive analysis of m6A related gene mutation characteristics and prognosis in colorectal cancer
Creators: name: Jiang, Tao
name: Xing, Linshuai
name: Zhao, Lipeng
name: Ye, Ziqi
name: Yu, Dong
name: Lin, Shengtao
Publisher: name: figshare
Year: 2023
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 4. LRPPRC: Analysis of the correlation between m6a regulators and clinical stage. Results of correlation between LRPPRC and clinical stage (p > 0.05).
Additional file 1: of Admissions and surgery as indicators of hospital functions in Sierra Leone during the west-African Ebola outbreak
Creators: name: HĂĽkon Bolkan
name: Duinen, Alex Van
name: Samai, Mohammed
name: Bash-Taqi, Donald
name: Gassama, Ibrahim
name: Waalewijn, Bart
name: Wibe, Arne
name: Schreeb, Johan Von
Publisher: name: figshare
Year: 2018
Subjects: subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Marine Biology
subject: Computational Biology

description: List of included hospitals. (PDF 15 kb)
Additional file 6 of Comprehensive analysis of m6A related gene mutation characteristics and prognosis in colorectal cancer
Creators: name: Jiang, Tao
name: Xing, Linshuai
name: Zhao, Lipeng
name: Ye, Ziqi
name: Yu, Dong
name: Lin, Shengtao
Publisher: name: figshare
Year: 2023
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 6. Correlation between m6A regulators and immunomodulatory factors in CRC: FMR1, IGF2BP1, LRPPRC, RBMX was negatively correlated with immunosuppressants, YTHDC2 was positively correlated with immunosuppressant.
Talent Flow Analytics in Online Professional Network
Creators: name: Oentaryo, Richard J.
name: Lim, Ee-Peng
name: Ashok, Xavier Jayaraj Siddarth
name: Prasetyo, Philips Kokoh
name: Ong, Koon Han
name: Lau, Zi Quan
Publisher: name: arXiv
Year: 2018
Subjects: subject: Social and Information Networks (cs.SI)
subject: FOS: Computer and information sciences

description: Analyzing job hopping behavior is important for understanding job preference and career progression of working individuals. When analyzed at the workforce population level, job hop analysis helps to gain insights of talent flow among different jobs and organizations. Traditionally, surveys are conducted on job seekers and employers to study job hop behavior. Beyond surveys, job hop behavior can also be studied in a highly scalable and timely manner using a data driven approach in response to fast-changing job landscape. Fortunately, the advent of online professional networks (OPNs) has made it possible to perform a large-scale analysis of talent flow. In this paper, we present a new data analytics framework to analyze the talent flow patterns of close to 1 million working professionals from three different countries/regions using their publicly-accessible profiles in an established OPN. As OPN data are originally generated for professional networking applications, our proposed framework re-purposes the same data for a different analytics task. Prior to performing job hop analysis, we devise a job title normalization procedure to mitigate the amount of noise in the OPN data. We then devise several metrics to measure the amount of work experience required to take up a job, to determine that existence duration of the job (also known as the job age), and the correlation between the above metric and propensity of hopping. We also study how job hop behavior is related to job promotion/demotion. Lastly, we perform connectivity analysis at job and organization levels to derive insights on talent flow as well as job and organizational competitiveness.
description: arXiv admin note: extension of arXiv:1711.05887, Data Science and Engineering, 2018
Lettre de Jean-François Séguier à Giovanni Bianchi , 1755-06-27
Creators: name: Séguier, Jean-François
name: Jean-François Séguier
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2021
Subjects: Antiquités (général)
Epigraphie
Fossiles
Sciences naturelles (général)

description: [transcription] Carissimo Amico

27 giugno 1755

Dovendosi il signor Vagner portarsi [sic] dalle vostre parti, non l’ho volsuto [sic] lasciare partire senza mandarvi qualche cosarella di questi colli, ed essendomi riuscito di trovare un granchio, che mi pare poter tenere luogo nel vostro museo, ve lo mando. Ora sono quasi affatto sproveduto di ogni sorta d’impietramenti avendo mandato a casa mia tutta la gran raccolta che ne teneva, insieme con tutti i libri, e ogn’altra cosa che avea raccolto nell’Italia o altrove. Più di cento ducati ci ha volsuto [sic] per incassare la roba, e mandarla solamente a Venezia, e 200 altri ne sarà di bisogno per farla condurre a casa: ma questo niente mi rincresce, basta che arrivi salva, e che oltre a i pericoli del mare, non abbia la mala sorte d’essere predata da’ Barbareschi, che ora sono in rottura con gli Olandesi, avendo imbarcato il tutto da due mesi in qua su un vascello di quella nazione. Da questo ben vedete che penso di ripassare di là da’ monti, e andare a casa a finire i miei giorni, dove gli affari miei mi richiamano: non penso però di partire che l’anno venturo perché voglio qui terminare cento e poi cento faccende letterarie che ho per le mani, e passare alcuni mesi in Venezia per fare estratti di que’ libri che non potrò che difficilmente / ritrovare in Francia. Me ne occorre molti degli Spagnuoli, che inutilmente cerco per quel mio indice critico delle inscrizioni antiche, e se dopo le ricerche che farò in Francia non gli trovo, sono quasi risoluto di portarmi in Ispagna per consultarli. Gli amici di Parigi mi hanno scritte mille lettere cortesi per richiamarmi presso di loro; e mi fanno offerte di servizi, ma gli interessi di casa non mi permettono di valermene per ora. In qualunque parte del mondo mi trovi, mi lusingo che mi darete nuove di voi, e che mi conservarete sempre il vostro affetto. Sono di tutto cuore

Verona 27 giugno 1755

Divotissimo Servitore vostro ed amico
Gianfrancesco Séguier

Adresse au vo: All’Illustrissimo Signor Signore Padrone Colendissimo/il Signore Giovanni Bianchi Medico/primario di/Rimini/con involtino
description: [objet joint à la lettre] Animaux
description: [description objet] Un crabe
description: [note autre main]
La date écrite en haut à droite du premier feuillet est probablement de la main de Giovanni Bianchi
description: [personnes citées] Pierre-Chrétien Wagner
description: [reférence bibliographique citée] Séguier, Jean-François, Index antiquarum inscriptionum quae in diversis operibus reperiuntur [BnF, ms. Lat. 16933].
Séguier, Jean François, Index inscriptionum quotquot in libris editis leguntur [BnF, ms. Lat. 16934-16935]
description: Source: [lieu de Conservation] Rimini, Biblioteca Gambalunga [cote]Fondo Gambetti, Lettere autografe al Dott. Giovanni Bianchi, pièce 71
title: ADCO, Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Cart. 32 (G 136), 745 folios, f. 0579
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: cartulaire
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge

description: Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Archives départementales de la Côte-d'Or, Cart. 32 (G 136), 745 folios, f. 0579, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Archives départementales de la Côte-d'Or, Cart. 32 (G 136), 745 folios, f. 0579, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: http://www.wikidata.org/entity/Q15945019
description: Provenance: abbaye Saint-Étienne de Dijon
MOESM2 of Specificity of the IgG antibody response to Plasmodium falciparum, Plasmodium vivax, Plasmodium malariae, and Plasmodium ovale MSP119 subunit proteins in multiplexed serologic assays
Creators: name: Priest, Jeffrey
name: Plucinski, Mateusz
name: Huber, Curtis
name: Rogier, Eric
name: Bunsoth Mao
name: Gregory, Christopher
name: Candrinho, Baltazar
name: Colborn, James
name: Barnwell, John
Publisher: name: figshare
Year: 2018
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Additional file 2. Additional MSP119 competition assay results using sera from low malaria incidence settings.
Charge transport in graphene-based mesoscopic realizations of Sachdev-Ye-Kitaev models
Creators: name: Can, Oguzhan
name: Nica, Emilian M.
name: Franz, Marcel
Publisher: name: arXiv
Year: 2018
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We consider a recent proposal for a physical realization of the Sachdev-Ye-Kitaev (SYK) model in the zeroth-Landau-level sector of an irregularly-shaped graphene flake. We study in detail charge transport signatures of the unique non-Fermi liquid state of such a quantum dot coupled to non-interacting leads. The properties of this setup depend essentially on the ratio $p$ between the number of transverse modes in the lead $M$ and the number of the fermion degrees of freedom $N$ on the SYK dot. This ratio can be tuned via the magnetic field applied to the dot. Our proposed setup gives access to the non-trivial conformal-invariant regime associated with the SYK model as well as a more conventional Fermi-liquid regime via tuning the field. The dimensionless linear response conductance acquires distinct $\sqrt{p}$ and $1/\sqrt{p}$ dependencies for the two phases respectively in the low-temperature limit, with a universal jump at the transition. We find that corrections scale linearly and quadratically in either temperature or frequency on the two sides of the transition. In the weak tunneling regime we find differential conductance proportional to the inverse square root of the applied voltage bias $U$. This dependence is replaced by a conventional Ohmic behavior with constant conductance proportional to $1/\sqrt{T}$ for bias energy $eU$ smaller than temperature scale $k_BT$. We also describe the out-of-equilibrium current-bias characteristics and discuss various crossovers between the limiting behaviors mentioned above.
description: 11 pages, 13 figures plus appendices
How to tap the minds of the brightest students for RSE?
Creators: name: Dorner, Michael
name: Angermeir, Florian
name: Fucci, Davide
name: Mendez, Daniel
Publisher: name: Zenodo
Year: 2024

description: An experience report on integrating research software engineering into a software testing course at Blekinge Institute of Technology, Sweden. 

More on our website: https://michaeldorner.github.io/rsemeetsteaching/
Melanargia galathea
Creators: name: Bonelli, Simona
name: Barbero, Francesca
name: Casacci, Luca Pietro
name: Cerrato, Cristiana
name: Balletto, Emilio
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Nymphalidae
Melanargia
Melanargia galathea

description: Melanargia galathea (Linnaeus, 1758)
Papilio galathea Linnaeus, 1758: 474.
FIRST RECORD FOR THE VALDIERI AREA. — Turati & Verity (1911).
CHOROTYPE. — European.
ECOLOGY. — Subnemoral, lowland-upper montane, mesophilous, mesophilous.
EDIT PROJECT SAMPLING. — Natural reserve Juniperus phoenicea, dry grassland 878 m, VII.2008; Fishing reserve Cappello di Napoleone, Beech-wood clearings, 1300 m, VII-VIII.2009, CS.
description: Published as part of Bonelli, Simona, Barbero, Francesca, Casacci, Luca Pietro, Cerrato, Cristiana & Balletto, Emilio, 2015, The butterfly fauna of the Italian Maritime Alps: results of the EDIT project, pp. 139-167 in Zoosystema 37 (1) on page 161, DOI: 10.5252/z2015n1a6, http://zenodo.org/record/5154896
Gravitational lensing on the Cosmic Microwave Background by gravity waves
Creators: name: Mollerach, Silvia
Publisher: name: arXiv
Year: 1997
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We study the effect of a stochastic background of gravitational waves on the gravitational lensing of the Cosmic Microwave Background (CMB) radiation. It has been shown that matter density inhomogeneities produce a smoothing of the acoustic peaks in the angular power spectrum of the CMB anisotropies. A gravitational wave background gives rise to an additional smoothing of the spectrum. For the most simple case of a gravitational wave background arising during a period of inflation, the effect results to be three to four orders of magnitude smaller than its scalar counterpart, and is thus undetectable. It could play a more relevant role in models where a larger background of gravitational waves is produced.
description: 6 pages, RevTeX file, 1 figure
The Gaia DR2 view of the Gamma Velorum cluster: resolving the 6D structure
Creators: name: Franciosini, E.
name: Sacco, G. G.
name: Jeffries, R. D.
name: Damiani, F.
name: Roccatagliata, V.
name: Fedele, D.
name: Randich, S.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: Gaia-ESO Survey observations of the young Gamma Velorum cluster led to the discovery of two kinematically-distinct populations, Gamma Vel A and B, respectively, with population B extended over several square degrees in the Vela OB2 association. Using the Gaia DR2 data for a sample of high-probability cluster members, we find that the two populations differ not only kinematically, but are also located at different distances along the line of sight, with the main cluster Gamma Vel A being closer. A combined fit of the two populations yields $\varpi_A = 2.895 \pm 0.008$ mas and $\varpi_B = 2.608 \pm 0.017$ mas, with intrinsic dispersions of $0.038 \pm 0.011$ mas and $0.091 \pm 0.016$ mas, respectively. This translates into distances of $345.4^{+1.0+12.4}_{-1.0-11.5}\,$ pc and $383.4^{+2.5+15.3}_{-2.5-14.2}\,$ pc, respectively, showing that Gamma Vel A is closer than Gamma Vel B by $\sim$38 pc. We find that the two clusters are nearly coeval, and that Gamma Vel B is expanding. We suggest that Gamma Vel A and B are two independent clusters located along the same line of sight.
description: 5 pages, 3 figures. Revised version after referee's comments, accepted for publication in Astronomy & Astrophysics
On the Thermal Regeneration Rate for Light Gravitinos in the Early Universe
Creators: name: Ellis, John
name: Nanopoulos, D. V.
name: Olive, Keith A.
name: REY, Soo-Jong
Publisher: name: arXiv
Year: 1995
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We investigate the light gravitino regeneration rate in the early Universe in models based on $N=1$ supergravity. Motivated by a recent claim by Fischler, we evaluate finite-temperature effects on the gravitino regeneration rate due to the hot primordial plasma for a wide range of the supersymmetry-breaking scale $F$. We find that thermal corrections to the gravitino pole mass and to the Goldstino coupling are negligible for a wide range of temperatures, thereby justifying the extension of the equivalence theorem for the helicity-1/2 gravitino and Goldstino to a hot primordial plasma background. Utilizing the Braaten-Pisarski resummation method, the helicity-1/2 gravitino regeneration rate is found to be $0.25 α_s(T) \log(1/α_s(T))|{m_{\rm soft}/F}|^2 T^3(1 + α_s(T) \log(1/α_s(T)) + T^2 / |F|)$ up to a calculable, model-dependent ${\cal O}(1)$ numerical factor. We review the implications of this regeneration rate for supergravity cosmology, focusing in particular on scenaria for baryogenesis.
description: REVTEX 32 pages, two encapsulated ps figure files
Adjoint L-functions for GL(3) and U(2,1)
Creators: name: Hundley, Joseph
name: Zhang, Qing
Publisher: name: arXiv
Year: 2018
Subjects: subject: Number Theory (math.NT)
subject: Representation Theory (math.RT)
subject: FOS: Mathematics
subject: 11F70, 22E50, 11F66

description: We show that the finite part of the adjoint $L$ function (including contributions from all nonarchimedean places, including ramified places) is holomorphic in $\Re(s) \ge 1/2$ for a cuspidal automorphic representation of $GL_3$ over a number field. This improves the main result of [H16]. We obtain more general results for twisted adjoint $L$ functions of both $GL_3$ and quasisplit unitary groups. For unitary groups, we explicate the relationship between poles of twisted adjoint $L$ functions, endoscopy, and the structure of the stable base change lifting.
description: Introduction is rewritten. The order of section 2 and section 3 are switched
Creating Generic Software Solutions for Specific Research Issues - Research Software Product Development without Reinventing the Wheel
Creators: name: Schima-Voigt, Kristine
name: Dogan, Mustafa
name: Pfennigstorf, Ingo
Publisher: name: Zenodo
Year: 2024
Subjects: RSE
Library
Software-Development
Agile

description: Certain research questions necessitate highly specialized software solutions tailored to the unique intricacies of the problem at hand. These questions often arise from the complex and nuanced nature of the research domain, demanding precise methodologies and algorithms that cater to specific requirements. In such cases, attempting to implement a generic solution might prove counterproductive and time-consuming. Nevertheless, while certain research questions demand highly specific software solutions, it is equally important to recognize instances where commonalities and synergies exist across diverse projects. In scenarios where the fundamental requirements overlap, the development of generic solutions becomes not only feasible but also advantageous. By leveraging shared expertise and identifying these common threads, research software engineers can create versatile research software products that cater to multiple research inquiries whereas reinventing the wheel leads to inefficient allocation of resources, as valuable time and effort are expended on solving problems that may have already been addressed by existing solutions. Striking the right balance between tailored and generic solutions not only optimizes resource utilization but also establishes a foundation for standardized practices, promoting collaboration and interoperability. This approach allows the research community to benefit from both the precision of specialized tools and the efficiency gained through the development of reusable, standardized software components. This nuanced approach acknowledges the diversity of research questions while harnessing the potential for synergies and collaborative advancements in research software engineering.

Creating research software products requires a combination of technical expertise, domain knowledge, effective collaboration with researchers, and a commitment to best practices. It is also imperative to incorporate the identification of overlapping requirements across diverse projects into the work culture of the RSE team.

The SUB software and service development team has been developing solutions for technical and methodological issues in project teams using collaborative and agile methods such as Scrum for over 10 years. In this session we will describe how we try to recognize synergies at an early stage, which methods and strategies we use to develop generic solutions in project work, what challenges we encounter, and how we manage them.
Noncommutative Geometry From Strings and Branes
Creators: name: Ardalan, F.
name: Arfaei, H.
name: Sheikh-Jabbari, M. M.
Publisher: name: arXiv
Year: 1998
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Noncommutative torus compactification of Matrix model is shown to be a direct consequence of quantization of the open strings attached to a D-membrane with a non-vanishing background $B$ field. We calculate the BPS spectrum of such a brane system using both string theory results and DBI action. The DBI action leads to a new transformation property of the compactification radii under the $SL(2,Z)_N$ transformations.
description: 20 pp, Tex file, one table, no figures, typos corrected, minor changs, version to appear in JHEP
Additional file 7 of Comprehensive analysis of m6A related gene mutation characteristics and prognosis in colorectal cancer
Creators: name: Jiang, Tao
name: Xing, Linshuai
name: Zhao, Lipeng
name: Ye, Ziqi
name: Yu, Dong
name: Lin, Shengtao
Publisher: name: figshare
Year: 2023
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 7. Correlation between m6A regulators and immunomodulatory factors in CRC. IGF2BP1, LRPPRC, RBMX was negatively correlated with immunostimulators, FMR1 and YTHDC2 was positively correlated with immunostimulator.
Deformation spaces and normal forms around transversals
Creators: name: Bischoff, Francis
name: Bursztyn, Henrique
name: Lima, Hudson
name: Meinrenken, Eckhard
Publisher: name: arXiv
Year: 2018
Subjects: subject: Differential Geometry (math.DG)
subject: Symplectic Geometry (math.SG)
subject: FOS: Mathematics

description: Given a manifold M with a submanifold N, the deformation space D(M,N) is a manifold with a submersion to R whose zero fiber is the normal bundle, and all other fibers are equal to M. This article uses deformation spaces to study the local behavior of various geometric structures associated with singular foliations, with N a submanifold transverse to the foliation. New examples include L_\infty-algebroids, Courant algebroids, and Lie bialgebroids. In each case, we obtain a normal form theorem around N, in terms of a model structure over the normal bundle.
description: 36 pages. v2: typos fixed
Additional file 1: of Inhibitor clinical burden of disease: a comparative analysis of the CHESS data
Creators: name: Abiola Oladapo
name: Lu, Mei
name: Walsh, Shaun
name: OâHara, Jamie
name: Kauf, Teresa
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Frequency of bleeds, physician-reported chronic hemophilia pain by severity, HRU frequency over 12Â months, and physician-reported satisfaction for patients with severe hemophilia in a CHESS study sample of unmatched cohorts with and without inhibitors. (DOCX 36 kb)
Additional file 8 of Comprehensive analysis of m6A related gene mutation characteristics and prognosis in colorectal cancer
Creators: name: Jiang, Tao
name: Xing, Linshuai
name: Zhao, Lipeng
name: Ye, Ziqi
name: Yu, Dong
name: Lin, Shengtao
Publisher: name: figshare
Year: 2023
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 8. Correlation between m6A regulators and immunomodulatory factors in CRC: FMR1, IGF2BP1, LRPPRC, RBMX was negatively correlated with MHC molecules, YTHDC2 positively correlated with MHC molecule.
Maniola jurtina
Creators: name: Bonelli, Simona
name: Barbero, Francesca
name: Casacci, Luca Pietro
name: Cerrato, Cristiana
name: Balletto, Emilio
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Nymphalidae
Maniola
Maniola jurtina

description: Maniola jurtina (Linnaeus, 1758)
Papilio jurtina Linnaeus, 1758: 475.
FIRST RECORD FOR THE VALDIERI AREA. — Turati & Verity (1911).
CHOROTYPE. — Turanic-Euro-Mediterranean.
ECOLOGY. — Subnemoral, lowland-upper montane, mesophilous, mesophilous.
EDIT PROJECT SAMPLING. — Natural reserve Juniperus phoenicea, dry grassland 878 m, VII.2008; Fishing reserve Cappello di Napoleone, Beech-wood clearings, 1300 m, VII.2009; Valasco, Subalpine scree, 1900 m, 2009, CS.
description: Published as part of Bonelli, Simona, Barbero, Francesca, Casacci, Luca Pietro, Cerrato, Cristiana & Balletto, Emilio, 2015, The butterfly fauna of the Italian Maritime Alps: results of the EDIT project, pp. 139-167 in Zoosystema 37 (1) on page 161, DOI: 10.5252/z2015n1a6, http://zenodo.org/record/5154896
Membranes from Five-Branes and Fundamental Strings from Dp Branes
Creators: name: Yi, Piljin
Publisher: name: arXiv
Year: 1999
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We argue that M2 brane is realized as a topological soliton on a coincident pair of M5 and anti-M5 branes, as the two five-branes annihilate each other. Topology and quantum numbers of this world-volume soliton are discussed in some detail, and its formation is explained qualitatively. It follows from a compactification that a D4-anti-D4 pair annihilate and produce type II fundamental strings. The phenomenon is best described as the confinement of a world-volume U(1) gauge field on D4-anti-D4, where the confined electric flux string is identified as the fundamental string. This generalizes to other D$p$-anti-D$p$ systems, and solves a puzzle recently pointed out by Witten.
description: LaTeX, 12 pages (typos corrected and minor changes in the text)
The biopolitics of ectogenesis in modern and contemporary anglophone literature
Creators: name: Campbell, Anna Jane
Publisher: name: The University of St Andrews
Year: 2024
Subjects: Ectogenesis
Artificial wombs
Contemporary literature
Modernist literature
Utopian studies
Foucault
Biopower
Eugenics

description: Ectogenesis is a theoretical artificial reproductive technology (ART) that entails gestating a mammalian embryo in an artificial or external womb. The term was coined in 1923 by J. B. S. Haldane, his neologism borrowing from Ancient Greek to mean “outside birth” or “outside origin.” While this technology is currently in development, it is not yet available for human use, so it can only currently be examined as it exists in the human imagination. As such this thesis seeks to investigate literary depictions of ectogenesis and related artificial reproductive technologies and how these depictions envision the biopolitical impact these technologies will have on the future. Examining one hundred years of anglophone literature on the topic – from 1923 until the present – this investigation looks at the different dynamics of power and control that ectogenesis allows over individual human bodies and populations at large, in different imagined versions of the future.
Same-sign Multilepton Signatures of an $SU(2)_R$ Quintuplet at the LHC
Creators: name: Agarwalla, Sanjib Kumar
name: Ghosh, Kirtiman
name: Kumar, Nilanjana
name: Patra, Ayon
Publisher: name: arXiv
Year: 2018
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We study in detail the collider signatures of an $SU(2)_R$ fermionic quintuplet in the framework of left-right symmetric model in the context of the 13 TeV LHC. Apart from giving a viable dark matter candidate ($χ^0$), this model provides unique collider imprints in the form of same-sign multileptons through the decays of multi-charged components of the quintuplet. In particular, we consider the scenario where the quintuplet carries $(B - L) = 4$ charge, allowing for the presence of high charge-multiplicity particles with relatively larger mass differences among them compared to $(B - L)$ = 0 or 2. In this paper, we mainly focus on the same-sign n-lepton signatures (nSSL). We show that with an integrated luminosity of 500 $fb^{-1}$, the mass of the neutral component, $M_{χ^0} \leq 480~(800)$ GeV can be excluded at 95\% CL in the 2SSL (3SSL) channel after imposing several selection criteria. We also show that a $5σ$ discovery is also achievable if $M_{χ^0} \leq 390~(750)$ GeV in the 2SSL (3SSL) channel with 1000 $fb^{-1}$ integrated luminosity.
description: 24 pages, 7 tables, 12 figures. Comments are welcome. Some modifications in the text for better understanding. Few references added. Accepted in JHEP
Predicting Acute Kidney Injury at Hospital Re-entry Using High-dimensional Electronic Health Record Data
Creators: name: Weisenthal, Samuel J.
name: Quill, Caroline
name: Farooq, Samir
name: Kautz, Henry
name: Zand, Martin S.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Machine Learning (cs.LG)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: Acute Kidney Injury (AKI), a sudden decline in kidney function, is associated with increased mortality, morbidity, length of stay, and hospital cost. Since AKI is sometimes preventable, there is great interest in prediction. Most existing studies consider all patients and therefore restrict to features available in the first hours of hospitalization. Here, the focus is instead on rehospitalized patients, a cohort in which rich longitudinal features from prior hospitalizations can be analyzed. Our objective is to provide a risk score directly at hospital re-entry. Gradient boosting, penalized logistic regression (with and without stability selection), and a recurrent neural network are trained on two years of adult inpatient EHR data (3,387 attributes for 34,505 patients who generated 90,013 training samples with 5,618 cases and 84,395 controls). Predictions are internally evaluated with 50 iterations of 5-fold grouped cross-validation with special emphasis on calibration, an analysis of which is performed at the patient as well as hospitalization level. Error is assessed with respect to diagnosis, race, age, gender, AKI identification method, and hospital utilization. In an additional experiment, the regularization penalty is severely increased to induce parsimony and interpretability. Predictors identified for rehospitalized patients are also reported with a special analysis of medications that might be modifiable risk factors. Insights from this study might be used to construct a predictive tool for AKI in rehospitalized patients. An accurate estimate of AKI risk at hospital entry might serve as a prior for an admitting provider or another predictive algorithm.
description: In revision
How the cost-effectiveness results change in the China health policy environment: an economic evaluation of glycopyrrolate/formoterol for the treatment of COPD
Creators: name: Wang, Luying
name: Gu, Weili
name: Zhang, Xiao
name: Fu, Shihui
name: Zhang, Donger
name: Guan, Xin
name: Li, Hongchao
name: Ma, Aixia
Publisher: name: Taylor & Francis
Year: 2022
Subjects: subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: To investigate the cost-effectiveness of glycopyrrolate/formoterol compared with tiotropium bromide for the treatment of moderate-to-severe COPD in China and discuss the influence of healthcare policies on the economic evaluation. A Markov model with seven disease states was built to evaluate the lifetime cost-effectiveness of glycopyrrolate/formoterol from the perspective of the Chinese healthcare sector. Drug prices both before and after the negotiation were applied to discuss the influence on the economic evaluation results. Exacerbation and adverse event were included in each cycle. The improvement of forced expiratory volume in 1 second (FEV1) and incidence rate of exacerbation were derived from pooled PINNACLE analysis. Mortality rates from Chinese life tables were adjusted using hazard ratios. Direct medical costs were modeled in accordance with the perspective chosen. Health resource utilization were derived from previous studies and expert’s opinions. Life-years gained, quality-adjusted life years (QALYs), and incidence of exacerbation were simulated as the health outcomes. One-way sensitivity analysis and probability analysis were conducted to explore the robustness of the base case results. Several scenario analyses were also designed. Glycopyrrolate/formoterol generated an additional 0.0063 LYs and 0.0032 QALYs with lower lifetime costs compared with tiotropium (CNY 27,854 vs. CNY 33,189) and was proved to be the dominant strategy in the base case analysis. The one-way sensitivity analysis confirmed the robustness of the base case results. The probabilities of glycopyrrolate/formoterol being cost-effective were 96.5, 95.7, and 93.0% when CNY 72,000 (1 time GDP per capital), CNY 108,000, and CNY 216,000 were used as thresholds, respectively. Compared with the scenario where price before negotiation was used, the cost-effectiveness based on current price was significantly increased. Glycopyrrolate/formoterol was demonstrated to be a clinically and cost-effective treatment for moderate-to-severe COPD in China using the latest price. The negotiation policy could increase the cost-effectiveness and benefit the patients.
On the Dust Extinction in High-z Galaxies and the Case of Extremely Red Objects
Creators: name: Cimatti, Andrea
name: Bianchi, Simone
name: Ferrara, Andrea
name: Giovanardi, Carlo
Publisher: name: arXiv
Year: 1997
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present the preliminary results of Monte Carlo simulations aimed to investigate the effects of realistic dust extinction (absorption + scattering) on the colours of high-z galaxies. In this paper, we concentrate on the case of spheroidal galaxies, and we obtain attenuation curves in the range 0.1-1.2$μ$m for different dust spatial distributions, and for a range of values of the dust optical depth, geometrical thickness and inclination of the dust disk. We find that the resultant curves are strongly dependent on the dust geometrical distribution and optical depth. A serendipitous finding is that the strength of the 2200 Åabsorption feature depends not only on the optical depth, but also on the dust geometrical distribution. As a first application, we test our results on two high-z galaxies with extremely red colours (HR10 and HR14) in order to infer clues on their ages, dust content and dust spatial distribution. We confirm that HR10 must be a very dusty galaxy, and we suggest that its stellar component should be strongly embedded in the dust in order to reproduce the observed extremely red colours.
description: 7 pages, MNRAS LaTeX, 3 figures
Deaf Londoners in the 1660s: Teachers' Guide (learning resource)
Creators: name: Loveman, Kate
name: Harrod, James
Publisher: name: University of Leicester
Year: 2024
Subjects: History

description: This guide supports teachers in introducing children and young people to Deaf history and the history of sign language.  It is part of set of resources on 'Deaf Londoners in the 1660s'. The guide features information on the lives of deaf Londoners and on signing in the seventeenth century (including new research by Kate Loveman).

It can also be used with a related set of resources for teaching the Great Fire of London to primary school children.

This guide was created by Kate Loveman and James Harrod for the Reimagining the Restoration project. The 'Deaf Londoners in the 1660s' teaching pack was first published on the Museum of London's website in 2023.