cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1: of Elastic constants of green Pinus radiata wood
Creators: name: Davies, Nicholas
name: Altaner, Clemens
name: Apiolaza, Luis
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Space Science
subject: Medicine
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy

description: Literature values of elastic constants for wood above the fibre saturation point. (docx 357 kb)
Admetula Cossmann 1889
Creators: name: Hansen, Thomas
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Neogastropoda
Cancellariidae
Admetula

description: Genus Admetula Cossmann, 1889
Type species. Buccinum evulsum Solander in Brander (1766) (type by original designation). Eocene, England.
description: Published as part of Hansen, Thomas, 2019, Gastropods from the Cretaceous-Palaeogene boundary in Denmark, pp. 1-196 in Zootaxa 4654 (1) on page 157, DOI: 10.11646/zootaxa.4654.1.1, http://zenodo.org/record/3365803
Convex optimization for generalized sparse recovery
Creators: name: Van Den Berg, Ewout
Publisher: name: University of British Columbia
Year: 2009

description: The past decade has witnessed the emergence of compressed sensing as a way of acquiring sparsely representable signals in a compressed form. These developments have greatly motivated research in sparse signal recovery, which lies at the heart of compressed sensing, and which has recently found its use in altogether new applications. In the first part of this thesis we study the theoretical aspects of joint-sparse recovery by means of sum-of-norms minimization, and the ReMBo-l₁ algorithm, which combines boosting techniques with l₁-minimization. For the sum-of-norms approach we derive necessary and sufficient conditions for recovery, by extending existing results to the joint-sparse setting. We focus in particular on minimization of the sum of l₁, and l₂ norms, and give concrete examples where recovery succeeds with one formulation but not with the other. We base our analysis of ReMBo-l₁ on its geometrical interpretation, which leads to a study of orthant intersections with randomly oriented subspaces. This work establishes a clear picture of the mechanics behind the method, and explains the different aspects of its performance. The second part and main contribution of this thesis is the development of a framework for solving a wide class of convex optimization problems for sparse recovery. We provide a detailed account of the application of the framework on several problems, but also consider its limitations. The framework has been implemented in the SPGL1 algorithm, which is already well established as an effective solver. Numerical results show that our algorithm is state-of-the-art, and compares favorably even with solvers for the easier---but less natural---Lagrangian formulations. The last part of this thesis discusses two supporting software packages: Sparco, which provides a suite of test problems for sparse recovery, and Spot, a Matlab toolbox for the creation and manipulation of linear operators. Spot greatly facilitates rapid prototyping in sparse recovery and compressed sensing, where linear operators form the elementary building blocks. Following the practice of reproducible research, all code used for the experiments and generation of figures is available online at http://www.cs.ubc.ca/labs/scl/thesis/09vandenBerg/.
MOESM5 of Update on Nox function, site of action and regulation in Botrytis cinerea
Creators: name: Marschall, Robert
name: Siegmund, Ulrike
name: Burbank, Joachim
name: Tudzynski, Paul
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Plant Biology

description: Additional file 5: Figure S5. BcNoxD_HDEL resembles the phenotype of BcNoxA_HDEL and has functions inside and outside the ER. ΔbcnoxD was complemented with an ER locked allele of bcnoxD. The construct was integrated into the bcniaD locus (Table S1). (A/B) The infection defect of ΔbcnoxD is fully restored by the ER locked allele of BcNoxD. Bean leaves were inoculated with conidiospores (105 conidia/ml) and monitored until the tissue was fully macerated. Lesion diameters were measured and statistically evaluated (3 bean plants/strain). (C) The ER bound allele of NoxD is not sufficient to restore the formation of hyphal fusions. Conidia were incubated on minimal medium for 18 h. Hyphal fusions were detected microscopically and evaluated statistically (300 spores each). (D) Sclerotia production is restored in the strain ΔbcnoxA:bcnoxD_HDEL. Agar plugs were incubated on CM in constant darkness for at least 14. (E) ΔbcnoxA:bcnoxD_HDEL displayed reduced levels of conidiospores. Spores were washed down from CM plates with 10 ml H2O and quantified in three replicates. (F) Stress resistance was tested on CM agar in comparison to selective media supplemented with H2O2 (10 mM) or menadione (500 µM) for seven days. Colony diameters were measured (here depicted: 3 dpi). The ER locked allele mediates resistance against oxidative stress conditions. (G) Infection cushion formation is restored in ΔbcnoxA:bcnoxD_HDEL. Onion epidermal layers were inoculated with agar plugs of the respective strains. Staining of fungal hyphae was performed with lactophenol blue just before microscopy.
Pushing the image quality by integrating FatNav and pTx Universal Pulses in MPRAGE and MP2RAGE sequences at 7T
Creators: name: Mauconduit, F.
name: Diraison, T.
name: Massire, A.
name: Gras, V.
name: Vignaud, A.
name: Gallichan, D.
name: Boulant, N.
Publisher: name: Zenodo
Year: 2024

description: Synopsis 

Motivation: Ultra-high field MRI of the brain suffers from an increased B1+ inhomogeneity as well as involuntary motion artifacts when very high spatial resolution is targeted.

Goals: Integration of a FatNav technique into pTx Universal Pulse sequences would be beneficial to reach the best image quality at very high resolution.

Approach: An MP(2)RAGE sequence using GRAPE pTx universal pulses was modified to integrate a FatNav module. High-resolution protocols were acquired in vivo on the brain.

Results: Very high-quality images were obtained throughout the brain and cerebellum thanks to FatNav motion correction and pTx Universal Pulses.
Data Management Plan
Creators: name: Aprile, Giulia
Publisher: name: Zenodo
Year: 2024

description: The Data Management Plan is the Deliverable 1.2 within the WP1 – Coordination and project management of the QUANTIFY project. This deliverable introduces the first version of the DMP.The DMP describes how data will be handled, its purpose is to ensure the availability and utility of the project’s research data. In addition, the plan will outline the measures that will be taken to maximize access and re-use of the data for further purposes and applications.
MOESM1 of rs1888747 polymorphism in the FRMD3 gene, gene and protein expression: role in diabetic kidney disease
Creators: name: Marjoriê Buffon
name: Carpena, Mariana
name: Sortica, Denise
name: Andressa Santer
name: Carlessi, Rodrigo
name: Souza, Bianca
name: Edelweiss, Maria
name: Berger, Milton
name: Crispim, Daisy
name: Canani, Luís
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Additional file 1: Table S1. Polymorphisms analyzed. Table S2. Primer sequences used to genotype polymorphisms and to analyze gene expression. Table S3. Clinical characteristics of the subjects included in the association study. Table S4. Clinical characteristics of subjects included in the expression study according to rs1888747 polymorphism.
Admetula Cossmann 1889
Creators: name: Hansen, Thomas
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Neogastropoda
Cancellariidae
Admetula

description: Admetula sp.
Figs 34 A–E
Material. Two fragmentary moulds, MGUH 33297 and MGUH 33298, the latter preserved as an amalgamation of an internal and external mould due to early dissolution of the shell surface.
Occurrence. The Cerithium Limestone Member south of Stevns Fyr and north of Holtug Quarry, Stevns Klint.
Description. Protoconch somewhat dome-like obtusely conical, with a small beginning and consisting of 1 ½ to 2 ½ convex whorls. Transition to teleoconch gradual, at least on the inner mould.
Teleoconch thin-shelled, ovoid-conical with moderately convex whorls separated by impressed suture. Spire whorls less than half as high as wide, characterized by narrow but distinct subsutural ramp. Aperture moderately narrow; outer lip with 6 or 7 teeth and in some strengthened by weak varix. Short columella with 3 strong columellar folds.
Teleoconch sculpture dominated by unevenly weak spiral threads or bands, separated by narrower grooves and increasing in number with whorl size. Shoulder ramp demarcated by stronger spiral band, which may be separated from adapical suture by up to four weaker threads on final whorls. Spirals crossed by prosocline and opisthocyrt growth lines curving strongly forward adapically. At times growth stops form weak collabral threads, resulting in a weakly reticulate sculpture. Weak varices present but unevenly distributed.
Measurements. The best preserved specimen MGUH 33297 is 7.7 mm wide and close to 12.5 mm high, but lacks the apex.
Remarks. This taxon is morphologically similar to the Palaeocene Admetula eivindi Schnetler & Petit, 2010 from Greenland, but is distinguished through the strength of the more obtuse protoconch, a less marked shoulder ramp, stronger columellar folds and by the presence of varices. It differs from the Selandian Kroisbachia conoidea (von Koenen, 1885) and Admetula latesulcata (von Koenen, 1885), both from Denmark, by the much narrower aperture and stronger columellar folds.
description: Published as part of Hansen, Thomas, 2019, Gastropods from the Cretaceous-Palaeogene boundary in Denmark, pp. 1-196 in Zootaxa 4654 (1) on page 157, DOI: 10.11646/zootaxa.4654.1.1, http://zenodo.org/record/3365803
MOESM4 of Update on Nox function, site of action and regulation in Botrytis cinerea
Creators: name: Marschall, Robert
name: Siegmund, Ulrike
name: Burbank, Joachim
name: Tudzynski, Paul
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Ecology
subject: Plant Biology

description: Additional file 4: Figure S4. Transcriptional regulation is not important for NoxB function. Three complementation constructs (C1–C3) were generated and transformed in ΔbcnoxB. Integration took place into the bcniiA locus (Table S1). (A) Wild type like spore-mediated infection is restored in ΔbcnoxB:C3. Primary bean leaves were infected with 7.5 µl of conidial suspension (105 conidia/ml). Lesion diameters were measured and statistically evaluated (3 bean plants/strain). (B) ΔbcnoxB, ΔbcnoxB:C1 and ΔbcnoxB:C2 are deficient in forming functional appressoria. Onion epidermal layers were infected with drops of a conidial suspension (105 conidia/ml). Just before microscopy the fungal hyphae were stained with lactophenol blue. (C) Only ΔbcnoxB:C3 produces the same amount of conidiospores as the wild type. Spores were harvested from CM plates with 10 ml H2O and quantified in replicates. (D) Plate assays for the determination of the stress resistance display identical results for the wild type and the strain ΔbcnoxB:C3. Agar plugs were placed on CM agar and medium supplemented with H2O2 (10 mM) or menadione (500 µM). Monitoring was accomplished for seven days. (E) Only ΔbcnoxB:C3 produces wild type like levels of ROS in microplate assays with the TRD kit. Spores were grown in a microtiter plate for 12-16 h. Just before microscopy the detection agent for the visualization of ROS was added. Monitoring took place in a Tecan Saphire with 3 × 3 reads. Replicates displayed similar results. Scale bars = 10 µm.
Mataxa Wade 1916
Creators: name: Hansen, Thomas
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Neogastropoda
Cancellariidae
Mataxa

description: Genus Mataxa Wade, 1916
Type species. Mataxa elegans Wade, 1916 (type by original designation). Cretaceous, Tennessee, USA.
description: Published as part of Hansen, Thomas, 2019, Gastropods from the Cretaceous-Palaeogene boundary in Denmark, pp. 1-196 in Zootaxa 4654 (1) on page 158, DOI: 10.11646/zootaxa.4654.1.1, http://zenodo.org/record/3365803
MOESM1 of Update on Nox function, site of action and regulation in Botrytis cinerea
Creators: name: Marschall, Robert
name: Siegmund, Ulrike
name: Burbank, Joachim
name: Tudzynski, Paul
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology

description: Additional file 1: Table S1. Strains used in this work.
Deliverable D3.1 - Report on recommendations for microbiome analysis standards
Creators: name: Dore, Joel
Publisher: name: Zenodo
Year: 2024

description: This internal report on recommendation for microbiome analysis standards aims to outline and briefly explain the landscape of the current analysis methods in the human microbiome field. It includes the preprocessing, primary, and secondary analysis of metagenomic, metatranscriptomic, metaproteomic, and metabolomic data, and ends with a description of integrated multi-omic analysis. This report also incorporates the input from experts, collected from the WP3 “Workshop on Establishing Consensus for Microbiome Analysis Standards” held on 20th September 2023 at EMBL Heidelberg.
Mataxa Hansen 2019, s.l.
Creators: name: Hansen, Thomas
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Neogastropoda
Cancellariidae
Mataxa

description: Mataxa s.l. sp.
Fig. 34G
Material. Specimen MGUH 33300 is an external mould.
Occurrence. Lithified top of the Maastrichtian Højerup Member at Holtug.
Description. Protoconch not preserved. Teleoconch bucciniform with weakly convex whorls separated by distinct, but fairly shallow suture. Whorls 2 ½ times as wide as high. Last whorl relatively large with evenly rounded sides and poorly developed canal. Aperture moderately wide and high, the height corresponding to at least 60 % of shell height. Siphonal canal short, wide, turned slightly to the left abapically. Columella moderately long, slightly curved, with weak columellar fold centrally. Outer lip slightly thickened but otherwise simple, without teeth.
Teleoconch sculpture consisting of fine, slightly irregular, flattened spiral ribs. A single stronger spiral rib borders the adapical suture. Growth lines prosocline and weakly sigmoid.
Measurements. MGUH 33300 is 3.8 mm wide and 5.7 mm high, but lacks the apex.
Remarks. The taxon differs from typical Mataxa species by the shorter siphonal canal and the presence of only one weak columellar fold. It seems thus not to be a Mataxa in the strict sense, but nonetheless appear closely related. It is here regarded as a Mataxa sensu lato.
This taxon differs from the Late Cretaceous Mataxa elegans Wade, 1916 of North America by the more convex whorls, the lack of teeth and by the presence of only one weak columellar fold. It differs from the Maastrichtian Mataxa arida Squires & Saul, 2003a from California by the much less sigmoid growth lines; the much finer sculpture and by the distinctly shorter siphonal canal.
description: Published as part of Hansen, Thomas, 2019, Gastropods from the Cretaceous-Palaeogene boundary in Denmark, pp. 1-196 in Zootaxa 4654 (1) on page 158, DOI: 10.11646/zootaxa.4654.1.1, http://zenodo.org/record/3365803
ANDROID APPLICATION PHYSICAL FITNESS TEST INSTRUMENT FOR CHILDREN AGED 10-12 YEARS
Creators: name: Sepriadi
name: Suwirman
name: Eldawaty
name: Monica Dara Pratiwi
name: Indri Wulandari
name: Muhammad Arnando
Publisher: name: Zenodo
Year: 2024
Subjects: Instruments, Physical Fitness, Android Application.

description: Abstract

Nowadays, technology and information technology are developing more rapidly, making people compete to build technology both in education and technology. The existing physical fitness test instrument has not yet been developed for an Android application. The instrument referred to in this research is a measuring tool, namely an Android-based physical fitness measuring tool specifically for the health of children aged 10-12 years. It is hoped that this instrument will be able to provide knowledge and skills about measuring physical fitness and Android-based health components for children aged 10-12 years. The research method used is research and development with 10 research stages with research subjects of children aged 10-12 years. By using a physical fitness instrument that consists of 5 components, namely the Body Mass Index (BMI) test, V Sit and Reach Test, Handgrip Dynamometer, 30-second sit-up, and Bleep Test. The data was analyzed using validity and reliability tests using the Content Validity Index (CVI) and Cronbach's alpha SPSS 25. This research produced an Android application that can help measure the physical fitness level of children aged 10-12 years with a validity value of 90 in the valid category. Conclusion: The development of an Android-based physical fitness test instrument can be applied to children aged 10-12 years to be able to see the level of physical fitness. Using this application will make it easier for users to measure the physical fitness level of students aged 10-12 years.
Numerical solution of skew-symmetric linear systems
Creators: name: Lau, Tracy
Publisher: name: University of British Columbia
Year: 2010

description: We are concerned with iterative solvers for large and sparse skew-symmetric linear systems. First we discuss algorithms for computing incomplete factorizations as a source of preconditioners. This leads to a new Crout variant of Gaussian elimination for skew-symmetric matrices. Details on how to implement the algorithms eﬃciently are provided. A few numerical results are presented for these preconditioners. We also examine a specialized preconditioned minimum residual solver. An explicit derivation is given, detailing the eﬀects of skew-symmetry on the algorithm.
MOESM2 of Update on Nox function, site of action and regulation in Botrytis cinerea
Creators: name: Marschall, Robert
name: Siegmund, Ulrike
name: Burbank, Joachim
name: Tudzynski, Paul
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology

description: Additional file 2: Table S2. Oligonucleotides used in this work.
Additional file 6: Figure S2. of Functional analysis and transcriptional output of the GĂśttingen minipig genome
Creators: name: Heckel, Tobias
name: Schmucki, Roland
name: Berrera, Marco
name: Ringshandl, Stephan
name: Badi, Laura
name: Steiner, Guido
name: Ravon, Morgane
name: KĂźng, Erich
name: Kuhn, Bernd
name: Kratochwil, Nicole
name: Schmitt, Georg
name: Kiialainen, Anna
name: Nowaczyk, Corinne
name: Hamina Daff
name: Azinwi Khan
name: Lekolool, Isaac
name: Pelle, Roger
name: Okoth, Edward
name: Bishop, Richard
name: Daubenberger, Claudia
name: Ebeling, Martin
name: Certa, Ulrich
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Sequence analysis of the HEPN1 pseudogene. Alignment of the human HEPN1 mRNA sequence (NM_001037558) with orthologs from the minipig, the Duroc Pig, Phacochoerus africanus (Warthog) and Potamochoerus larvatus (Bushpig. The A/G start-codon mutation is highlighted in green, insertions or deletions are in yellow, stop-codons in red and conserved sequences are colored in magenta. (PDF 115 kb)
Additional file 3: Table S3. of Functional analysis and transcriptional output of the GĂśttingen minipig genome
Creators: name: Heckel, Tobias
name: Schmucki, Roland
name: Berrera, Marco
name: Ringshandl, Stephan
name: Badi, Laura
name: Steiner, Guido
name: Ravon, Morgane
name: KĂźng, Erich
name: Kuhn, Bernd
name: Kratochwil, Nicole
name: Schmitt, Georg
name: Kiialainen, Anna
name: Nowaczyk, Corinne
name: Hamina Daff
name: Azinwi Khan
name: Lekolool, Isaac
name: Pelle, Roger
name: Okoth, Edward
name: Bishop, Richard
name: Daubenberger, Claudia
name: Ebeling, Martin
name: Certa, Ulrich
Publisher: name: Figshare
Year: 2015
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology
subject: Computational Biology

description: Mapping rates of Duroc gene sequences to available porcine genomes. (DOCX 13 kb)
Path planning for improved target visibility : maintaining line of sight in a cluttered environment
Creators: name: Baumann, Matthew Alexander
Publisher: name: University of British Columbia
Year: 2009

description: The visibility-aware path planner addresses the problem of path planning for target visibility. It computes sequences of motions that afford a line of sight to a stationary visual target for sensors on a robotic platform. The visibility-aware planner uses a model of the visible region, namely, the region of the task space in which a line of sight exists to the target. The planner also takes the orientation of the sensor into account, utilizing a model of the field of view frustum. The planner applies a penalty to paths that cause the sensor to lose target visibility by exiting the visible region or rotating so the target is not in the field of view. The planner applies these penalties to the edges in a probabilistic roadmap, providing weights in the roadmap graph for graph-search based planning algorithms. This thesis presents two variants on the planner. The static multi-query planner precomputes penalties for all roadmap edges and performs a best-path search using Dijkstra's algorithm. The dynamic single-query planner uses an iterative test-and-reject search to find paths of acceptable penalty without the benefit of precomputation. Four experiments are presented which validate the planners and present examples of the path planning for visibility on 6-DOF robot manipulators. The algorithms are statistically tested with multiple queries. Results show that the planner finds paths with significantly lower losses of target visibility than existing shortest-path planners.
MOESM3 of Update on Nox function, site of action and regulation in Botrytis cinerea
Creators: name: Marschall, Robert
name: Siegmund, Ulrike
name: Burbank, Joachim
name: Tudzynski, Paul
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology

description: Additional file 3: Figure S3. Bioinformatic analysis of BcNoxA and BcNoxB. (A) Protein sequence of BcNoxA with the highlighted putative signal peptide. The prediction was accomplished using the SOSUIsignal algorithm. (B) Alignment of BcNoxA and BcNoxB using the Clustal ÎŠ algorithm. The N-terminal elongation of NoxB was used in the cross complementation experiments. Asterisk highlight identical amino acids, while colons are indicating amino acids with similar characteristics. Dots refer to a faint resemblance.
title: Household impacts and relocation following the 2021 Westport flooding: Results of a survey
Creators: name: Scheele, Finn R.
name: Paulik, Ryan
Publisher: name: GNS Science
publisherIdentifier: https://ror.org/03vaqfv64
publisherIdentifierScheme: ROR
Year: 2024

description: Heavy rainfall led to significant flooding of residential areas in Westport, Buller District, during 17–18 July 2021. Approximately 2065 people were evacuated, over 300 people stayed in emergency accommodation, 71 homes received red placards (deemed unsafe to occupy) and 388 received yellow placards (uninhabitable until repaired). The displacement of residents and subsequent recovery of uninhabitable dwellings led to major disruption for residents. To gather data on the experiences of affected residents, a paper-based questionnaire was delivered to households in affected areas during 5–6 July 2023. The survey asked participants questions regarding property impacts; re-location decision-making; temporary accommodation types, locations, timeframes and suitability; and demographics. This report presents the results of the survey (auths)
Additional file 5: Table S5. of Proteomic analysis of breast tumors confirms the mRNA intrinsic molecular subtypes using different classifiers: a large-scale analysis of fresh frozen tissue samples
Creators: name: Waldemarson, Sofia
name: Kurbasic, Emila
name: Krogh, Morten
name: Cifani, Paolo
name: BerggĂĽrd, Tord
name: Ă Ke Borg
name: James, Peter
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Inorganic Chemistry
subject: Plant Biology

description: The clinical data for the tumors selected for selected reaction monitoring with sample type, BRCA1 methylation status, ER, and PgR status, and the RNA classifications. (PDF 28 kb)
La Enamorada de Cristo María Jesus de Gracia
Creators: name: Leblanc Elina
Publisher: name: Zenodo
Year: 2021
Subjects: Spanish literature
Digital edition
XML-TEI

description: Digital edition of a Spanish pliego de cordel, published by the Andalusian printer José María Moreno (19th c.). It contains the XML-TEI file of the edition, as well as the files that led to this edition, i.e. the digital facsimiles (raw and retouched), and the transcription produced by the OCR tool Transkribus (PAGE-XML). This digital edition is a part of the research project Desenrollando el cordel / Untangling the cordel / Démêler le cordel (2020-2022), led by the professor Constance Carta at the University of Geneva and supported by the philanthropic Sandoz-Monique de Meuron Family Foundation.
Additional file 11: Table S6. of Functional analysis and transcriptional output of the GĂśttingen minipig genome
Creators: name: Heckel, Tobias
name: Schmucki, Roland
name: Berrera, Marco
name: Ringshandl, Stephan
name: Badi, Laura
name: Steiner, Guido
name: Ravon, Morgane
name: KĂźng, Erich
name: Kuhn, Bernd
name: Kratochwil, Nicole
name: Schmitt, Georg
name: Kiialainen, Anna
name: Nowaczyk, Corinne
name: Hamina Daff
name: Azinwi Khan
name: Lekolool, Isaac
name: Pelle, Roger
name: Okoth, Edward
name: Bishop, Richard
name: Daubenberger, Claudia
name: Ebeling, Martin
name: Certa, Ulrich
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Space Science
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Parameter settings for LC/MS analyte detection in positive or negative ion MRM mode. (DOCX 14 kb)
La Enamorada de Cristo María Jesus de Gracia
Creators: name: Leblanc Elina
Publisher: name: Zenodo
Year: 2022
Subjects: Spanish literature
Digital edition
XML-TEI

description: Digital edition of a Spanish pliego de cordel, published by the Andalusian printer José María Moreno (19th c.). It contains the XML-TEI file of the edition, as well as the files that led to this edition, i.e. the digital facsimiles (raw and retouched), and the transcription produced by the OCR tool Transkribus (PAGE-XML). This digital edition is a part of the research project Desenrollando el cordel / Untangling the cordel / Démêler le cordel (2020-2022), led by the professor Constance Carta at the University of Geneva and supported by the philanthropic Sandoz-Monique de Meuron Family Foundation.
Neogastropoda Wenz 1938
Creators: name: Hansen, Thomas
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Neogastropoda

description: Neogastropoda genus et sp. indet.
Figs 34 H–I
Material. Specimen MGUH 33301 consists of an external and part of an internal mould.
Occurrence. Lithified top of the Maastrichtian Højerup Member at Rødvig, Stevns Klint.
Description. Protoconch conical, multispiral, nearly 0.7 mm high and 0.7 mm wide, consisting of around 3 ½ weakly convex and smooth whorls. Suture moderately impressed.
Teleoconch weakly to moderately convex with gradual transition to base. Aperture and possible canal not preserved. Teleoconch sculpture consisting of fine spiral striae, the most adapical slightly stronger than succeeding ones. Growth lines appearing nearly orthogonal.
Measurements. MGUH 33301 is 1.55 mm high and 0.9 mm wide, consisting of 4 ¼ whorls.
Remarks. The fragmentary and sparse material makes a more precise taxonomical assignment of this species very dubious at best. The nearly orthogonal growth lines, the multispiral protoconch and the seeming lack of transverse teleoconch sculpture may suggest a possible connection to the family Buccinidae. It superficially resembles the young shell of Orthosurcula s.l. cerithiorum (Ravn, 1902) treated above, but differs by the growth line pattern and by the slightly smaller size of the protoconch.
description: Published as part of Hansen, Thomas, 2019, Gastropods from the Cretaceous-Palaeogene boundary in Denmark, pp. 1-196 in Zootaxa 4654 (1) on page 160, DOI: 10.11646/zootaxa.4654.1.1, http://zenodo.org/record/3365803
La Enamorada de Cristo María Jesus de Gracia
Creators: name: Leblanc Elina
Publisher: name: Zenodo
Year: 2022
Subjects: Spanish literature
Digital edition
XML-TEI

description: Digital edition of a Spanish pliego de cordel, published by the Andalusian printer José María Moreno (19th c.). It contains the XML-TEI file of the edition, as well as the files that led to this edition, i.e. the digital facsimiles (raw and retouched), and the transcription produced by the OCR tool Transkribus (PAGE-XML). This digital edition is a part of the research project Desenrollando el cordel / Untangling the cordel / Démêler le cordel (2020-2024), led by the professor Constance Carta at the University of Geneva and supported by the philanthropic Sandoz-Monique de Meuron Family Foundation.
MOESM1 of Comparing insecticide-treated bed net use to Plasmodium falciparum infection among schoolchildren living near Lake Victoria, Kenya
Creators: name: Collins Okoyo
name: Mwandawiro, Charles
name: Kihara, Jimmy
name: Elses Simiyu
name: Gitonga, Caroline
name: Abdisalan Noor
name: Njenga, Sammy
name: Snow, Robert
Publisher: name: Figshare
Year: 2015
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: FOS: Biological sciences
subject: Computational Biology

description: Additional file 1: Table S1. Univariable analysis of factors associated with malaria infection prevalence.
A paradigm for classroom presentations on large, high-resolution displays
Creators: name: Lanir, Yoel
Publisher: name: University of British Columbia
Year: 2009

description: Large classrooms traditionally provided multiple blackboards on which entire lectures were visible. In recent decades, classrooms were augmented with data projectors, allowing computer-generated slides to replace hand-written blackboard notes. Many lecture halls and conference rooms are now equipped with multiple projectors that provide large, high-resolution displays of sizes comparable to old-fashioned blackboard arrays. The predominant presentation software, however, is still designed for a single projector. Our research was to understand how software tools for classroom presentations can bridge the gap between traditional and newer technology to take full advantage of increased screen resolution and real estate to benefit both instructors and students. As a first step, we conducted observational studies to see how blackboards and computer slides were used in classroom and conference settings. We developed a classification of usage for traditional and electronic visual aids. We then introduced six guidelines for designers of presentation tools to support learning. Based on the guidelines, we developed MultiPresenter – a novel presentation system designed to work on large display surfaces with multiple or high-resolution displays. MultiPresenter allows instructors to organize and present pre-made and dynamic presentations using a personal laptop. Instructors can employ the extra screen real estate to provide short- or long-term persistency of information. MultiPresenter was used by eight instructors in fifteen classes over five consecutive semesters. We collected usage data and iteratively refined the software. Based on our data, we identified a set of pedagogical practices for using extra space in electronic presentations and we revised our design guidelines. This led to a conceptual framework for effectively using large display surfaces in classrooms. To empirically examine the effect on students‘ learning of increasing screen real estate, we conducted a controlled laboratory study. Results indicated that, when used properly, a lecture shown on multiple screens can improve learning over a regular singlescreen lecture.
MOESM1 of Strong preference of BRCA1 protein to topologically constrained non-B DNA structures
Creators: name: Brázda, Václav
name: Hároníková, Lucia
name: Liao, Jack
name: Fridrichová, Helena
name: Jagelská, Eva
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Figure S1. SDS-PAGE of isolated BRCA1. Figure S2. Comparison of BRCA1-A binding to different oligonucleotide structures. Figure S3. Oligonucleotides used in the study.
Additional file 4: Table S4. of Proteomic analysis of breast tumors confirms the mRNA intrinsic molecular subtypes using different classifiers: a large-scale analysis of fresh frozen tissue samples
Creators: name: Waldemarson, Sofia
name: Kurbasic, Emila
name: Krogh, Morten
name: Cifani, Paolo
name: BerggĂĽrd, Tord
name: Ă Ke Borg
name: James, Peter
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Plant Biology

description: The selected reaction monitoring (SRM) assays set up after refinement, containing 190 proteins represented by 253 peptides. The protein names, peptide sequences, Q1/Q3 transitions, collision energy, and fragment being monitored are given. (PDF 297 kb)
Additional file 5: Table S4. of Functional analysis and transcriptional output of the GĂśttingen minipig genome
Creators: name: Heckel, Tobias
name: Schmucki, Roland
name: Berrera, Marco
name: Ringshandl, Stephan
name: Badi, Laura
name: Steiner, Guido
name: Ravon, Morgane
name: KĂźng, Erich
name: Kuhn, Bernd
name: Kratochwil, Nicole
name: Schmitt, Georg
name: Kiialainen, Anna
name: Nowaczyk, Corinne
name: Hamina Daff
name: Azinwi Khan
name: Lekolool, Isaac
name: Pelle, Roger
name: Okoth, Edward
name: Bishop, Richard
name: Daubenberger, Claudia
name: Ebeling, Martin
name: Certa, Ulrich
Publisher: name: Figshare
Year: 2015
Subjects: subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Disrupted minipig orthologs of human protein coding genes. (DOCX 14 kb)
Additional file 1: of National health research systems in the WHO African Region: current status and the way forward
Creators: name: Joses Kirigia
name: Ota, Martin
name: Motari, Marion
name: Bataringaya, Juliet
name: Mouhouelo, Pascal
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Governance structures for health research in the WHO African Region. (DOCX 21 kb)
Additional file 1: of A new primary dental care service compared with standard care for child and family to reduce the re-occurrence of childhood dental caries (Dental RECUR): study protocol for a randomised controlled trial
Creators: name: Pine, Cynthia
name: Adair, Pauline
name: Girvan Burnside
name: Robinson, Louise
name: Edwards, Rhiannon
name: Sondos Albadri
name: Curnow, Morag
name: Ghahreman, Marjan
name: Henderson, Mary
name: Malies, Clare
name: Ferranti Wong
name: Muirhead, Vanessa
name: Weston-Price, Sally
name: Whitehead, Hilary
Publisher: name: Figshare
Year: 2015
Subjects: subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Modified dental contemplation ladder. (DOCX 91 kb)
Additional file 2: Table S2. of Functional analysis and transcriptional output of the GĂśttingen minipig genome
Creators: name: Heckel, Tobias
name: Schmucki, Roland
name: Berrera, Marco
name: Ringshandl, Stephan
name: Badi, Laura
name: Steiner, Guido
name: Ravon, Morgane
name: KĂźng, Erich
name: Kuhn, Bernd
name: Kratochwil, Nicole
name: Schmitt, Georg
name: Kiialainen, Anna
name: Nowaczyk, Corinne
name: Hamina Daff
name: Azinwi Khan
name: Lekolool, Isaac
name: Pelle, Roger
name: Okoth, Edward
name: Bishop, Richard
name: Daubenberger, Claudia
name: Ebeling, Martin
name: Certa, Ulrich
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology

description: Contig assembly statistics. Roche-454 reads that were not incorporated into the minipig genome were assembled de-novo with Roche-Newbler software. (DOCX 13 kb)
Disculus Deshayes 1863
Creators: name: Hansen, Thomas
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Heterostropha
Architectonicidae
Disculus

description: Genus Disculus Deshayes, 1863
Type species. Modulus disculus Philippi, 1846 (type by monotypy). Eocene, France.
description: Published as part of Hansen, Thomas, 2019, Gastropods from the Cretaceous-Palaeogene boundary in Denmark, pp. 1-196 in Zootaxa 4654 (1) on page 161, DOI: 10.11646/zootaxa.4654.1.1, http://zenodo.org/record/3365803
Additional file 9: Table S5. of Functional analysis and transcriptional output of the GĂśttingen minipig genome
Creators: name: Heckel, Tobias
name: Schmucki, Roland
name: Berrera, Marco
name: Ringshandl, Stephan
name: Badi, Laura
name: Steiner, Guido
name: Ravon, Morgane
name: KĂźng, Erich
name: Kuhn, Bernd
name: Kratochwil, Nicole
name: Schmitt, Georg
name: Kiialainen, Anna
name: Nowaczyk, Corinne
name: Hamina Daff
name: Azinwi Khan
name: Lekolool, Isaac
name: Pelle, Roger
name: Okoth, Edward
name: Bishop, Richard
name: Daubenberger, Claudia
name: Ebeling, Martin
name: Certa, Ulrich
Publisher: name: Figshare
Year: 2015
Subjects: subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Mapping rates of Bushpig and Warthog WGS reads to minipig lncRNA sequences. (DOCX 28 kb)
Additional file 1: Table S1. of Proteomic analysis of breast tumors confirms the mRNA intrinsic molecular subtypes using different classifiers: a large-scale analysis of fresh frozen tissue samples
Creators: name: Waldemarson, Sofia
name: Kurbasic, Emila
name: Krogh, Morten
name: Cifani, Paolo
name: BerggĂĽrd, Tord
name: Ă Ke Borg
name: James, Peter
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer

description: The clinical parameters of the tumors used in the 2D-DIGE analysis are given in this table: Sex, tumor type, BRCA type, age at diagnosis, ER status, PgR status, RNA subtype classification according to Hu, SĂśrlie, and PAM50 and the associated gel number. (PDF 115 kb)
MOESM1 of Characteristic strategy of assimilation of various saccharides by Clostridium cellulovorans
Creators: name: Inamori, Takako
name: Aburaya, Shunsuke
name: Morisaka, Hironobu
name: Kuroda, Kouichi
name: Ueda, Mitsuyoshi
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology

description: Additional file 1: Fig S1. Oligosaccharide assimilation by C. cellulovorans. C. cellulovorans was grown in media containing 6 g/L glucose, 6 g/L cellobiose, and 6 g/L xylooligosaccharides mixture (a), 10 g/L glucose and 10 g/L xylooligosaccharides (b), 10 g/L cellobiose and 10 g/L xylooligosaccharides (c). Residual sugar amount was normalized to that of 0 h (set to 100%). Closed circles, glucose; open triangles, cellobiose; open squares, xylooligosaccharide. All points were measured in triplicate. Error bars represent means Âą SEs.
Clathrobaculus Cossmann 1912
Creators: name: Hansen, Thomas
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Heterostropha
Mathildidae
Clathrobaculus

description: Genus Clathrobaculus Cossmann, 1912
Type species. Cerithium ziczac Eudes-Deslongchamps, 1842 (type by original designation). Early Jurassic, France.
description: Published as part of Hansen, Thomas, 2019, Gastropods from the Cretaceous-Palaeogene boundary in Denmark, pp. 1-196 in Zootaxa 4654 (1) on page 164, DOI: 10.11646/zootaxa.4654.1.1, http://zenodo.org/record/3365803
La Enamorada de Cristo María Jesus de Gracia
Creators: name: Leblanc Elina
Publisher: name: Zenodo
Year: 2024
Subjects: Spanish literature
Digital edition
XML-TEI

description: Digital edition of a Spanish pliego de cordel, published by the Andalusian printer José María Moreno (19th c.). It contains the XML-TEI file of the edition, as well as the files that led to this edition, i.e. the digital facsimiles (raw and retouched), and the transcription produced by the OCR tool Transkribus (PAGE-XML). This digital edition is a part of the research project Desenrollando el cordel / Untangling the cordel / Démêler le cordel (2020-2024), led by professor Constance Carta at the University of Geneva and supported by the philanthropic Sandoz-Monique de Meuron Family Foundation.
Mobilise-D Scoping Review: Dataset, code and files
Creators: name: Polhemus, Ashley
Publisher: name: Zenodo
Year: 2022

description:  

Polhemus, A., Delgado-Ortiz, L., Brittain, G. et al. Walking on common ground: a cross-disciplinary scoping review on the clinical utility of digital mobility outcomes. npj Digit. Med. 4, 149 (2021). https://doi.org/10.1038/s41746-021-00513-5

 
description: This work was supported by the Mobilise-D project that has received funding from the Innovative Medicines Initiative 2 Joint Undertaking under grant agreement No. 820820. This Joint Undertaking receives support from the European Union's Horizon 2020 research and innovation program and the European Federation of Pharmaceutical Industries and Associations (EFPIA). Content in this publication reflects the authors' view and neither IMI nor the European Union, EFPIA, or any Associated Partners are responsible for any use that may be made of the information contained herein.