cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
The dynamics of the Parmigiano-Reggiano production system
Creators: name: De Roest, Kees
name: De Roest, Kees
Publisher: name: Unknown
Year: 1999
Subjects: subject: Agribusiness
subject: Parmigiano-Reggiano
subject: Parmesan
subject: vertical co-ordination
subject: cheese dairies
subject: profitability
subject: market power

description: This paper contains an analysis of the dynamics of the economic behaviour of the cheese dairies operating within the "Parmigiano-Reggiano" (PR) cheese production system. These firms play a crucial role in the supply chain of this highly artisanal product, which interests over 15% of Italian milk production. The analysis is focused in particular on the nature of the up and downstream relationships of the cheese dairies. Sub-chains are identified characterised by stable and constant relationships between dairy farmers, cheese dairies and who/esaler-ripeners, which contribute significantly to the reduction of transaction costs. Cheese dairies have only limited possibilities for product diversification. This strategy is performed essentially by the cheese ripening firms. Cheese production techniques remain primarily artisanal, where the cheese-maker continues to play a key role in the quality definition of the cheese. However, standardisation practices are introduced to comply with the demand of the large retailers, increasingly asking for cheese Jots with constant and limited quality variations. The profitability of the PR system is highly cyclical and the market transparency is low, but five-year averages show that the remuneration of labour and capital invested on the dairy farms and the cheese dairies is satisfactory.
Additional file 6 of Standardization of electrolyte leakage data and a novel liquid nitrogen control improve measurements of cold hardiness in woody tissue
Creators: name: Kovaleski, Alisson P.
name: Grossman, Jake J.
Publisher: name: figshare
Year: 2021
Subjects: subject: Biotechnology
subject: Ecology
subject: FOS: Biological sciences
subject: Plant Biology

description: Additional file 6: Figure S5. A) Electrolyte leakage increased gradually over seven days following experimental freezing (light blue), but not exposure to a boiling or liquid nitrogen control (turquoise), with no evidence of a significant difference when conductivity was measured over the first 48 hours after freezing. Lowercase letters indicate significant differences in conductivity measured at different time points at the 0.05 level based on models reported in Additional file 2C panels A (light blue, a-c) and B (turquoise, d-e). B) As a result of this pattern, estimates of critical values for cold hardiness (T50) are consistent and reflect species differences when samples were incubated for one or two days, but not when they were incubated for 5 or 7 days (Additional file 2D).
Gromilus sulcicollis
Creators: name: Morrone, Juan J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Gromilus
Gromilus sulcicollis

description: Gromilus sulcicollis (Broun, 1913)
 Phygothalpus sulcicollis Broun, 1913: 118 (type locality: New Zealand: Bold Peak, Lake Wakatipu, 6500 feet; type material: H: BMNH).
 Gromilus sulcicollis; Kuschel, 1964: 459.
 Distribution. New Zealand (Schenkling and Marshall, 1929).
description: Published as part of Morrone, Juan J., 2011, Annotated checklist of the tribe Listroderini (Coleoptera: Curculionidae: Cyclominae) 3119, pp. 1-68 in Zootaxa 3119 (1) on page 24, DOI: 10.11646/zootaxa.3119.1.1, http://zenodo.org/record/5246257
Additional file 1 of Longitudinal association of edentulism with cognitive impairment, sarcopenia and all-cause mortality among older Chinese adults
Creators: name: Li, Yang
name: Huang, Chuan-Long
name: LU, Xiu-Zhen
name: Tang, Zi-Qing
name: Wang, Yuan-Yin
name: Sun, Ying
name: Chen, Xin
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Neuroscience
subject: Environmental Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Mental Health

description: Supplementary Material 1
Artisanal and industrial models of the PDQ cheese Queijo de Nisa (North of Alentejo, Portugal)
Creators: name: Fragata, Antonio
name: Louro Martins, Antonio Pedro
name: Vasconcelos, Maria Manuela
name: Fragata, Antonio
name: Louro Martins, Antonio Pedro
name: Vasconcelos, Maria Manuela
Publisher: name: Unknown
Year: 1999
Subjects: subject: Agribusiness
subject: Research Methods/ Statistical Methods
subject: PDO cheese Queijo de Nisa
subject: models of processors
subject: typicity
subject: tecnological management

description: Among the processors of PDO "Queijo de Nisa" two different types of cheese dairies were identified : one type including micro and artisanal units and the other type including small firms with industrial equipment. This contribution tries to answer the question "For what reasons is cheese without typicity produced by the units with industrial equipment ?". The action associates the local managers of PDO and researchers, including the authors of this paper, and the conclusion presented results from a joint reflection on the scope of an action - research model. It is adopted the point of view of plurality of rationality in management actions in the field of Protected Designation of Origin.
Multimessenger Probes of High-energy Sources
Creators: name: Guetta, Dafne
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: Multimessenger observations may hold the key to learn about the most energetic sources in the universe. The recent construction of large scale observatories opened new possibilities in testing non thermal cosmic processes with alternative probes, such as high energy neutrinos and gravitational waves. We propose to combine information from gravitational wave detections, neutrino observations and electromagnetic signals to obtain a comprehensive picture of some of the most extreme cosmic processes. Gravitational waves are indicative of source dynamics, such as the formation, evolution and interaction of compact objects. These compact objects can play an important role in astrophysical particle acceleration, and are interesting candidates for neutrino and in general high-energy astroparticle studies. In particular we will concentrate on the most promising gravitational wave emitter sources: compact stellar remnants. The merger of binary black holes, binary neutron stars or black hole-neutron star binaries are abundant gravitational wave sources and will likely make up the majority of detections. However, stellar core collapse with rapidly rotating core may also be significant gravitational wave emitter, while slower rotating cores may be detectable only at closer distances. The joint detection of gravitational waves and neutrinos from these sources will probe the physics of the sources and will be a smoking gun of the presence of hadrons in these objects which is still an open question. Conversely, the non-detection of neutrinos or gravitational waves from these sources will be fundamental to constrain the hadronic content.
description: Published in EPJ Web Conf. Volume 209, 01036, pg.9, 2019; RICAP18, 7th Roma International Conference on Astroparticle Physics
Hoplitis (Anthocopa) ogilviae Kuhlmann & Gess & Koch & Gess 2011, comb. nov.
Creators: name: Kuhlmann, M.
name: Gess, F. G.
name: Koch, F.
name: Gess, S. K.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Megachilidae
Hoplitis
Hoplitis ogilviae

description: Hoplitis (Anthocopa) ogilviae (Cockerell, 1932) comb. nov.
(Figs 2c–d)
 Osmia ogilviae Cockerell, 1932c: 439–440.
 Male type: (handwritten): Calvinia, C.P., on mountain, Nov. 14, L.O. / (Cockerell’s handwriting): Osmia ogilviae Ckll. TYPE / B.M. Type HYM.17a.2720 (NHML).
 Hoplitis (Anthocopa) sp. A (partim): Gess and Gess 2003: 178 (flower visiting).
 Flower visiting. One male was collected together with three females and five males of another species of Hoplitis (Anthocopa) from flowers of Pelargonium myrrhifolium Ait. (Geraniaceae) near Oudtshoorn by Charles Jacot Guillarmod.
description: Published as part of Kuhlmann, M., Gess, F. G., Koch, F. & Gess, S. K., 2011, Southern African osmiine bees: taxonomic notes, two new species, a key to Wainia, and biological observations (Hymenoptera: Anthophila: Megachilidae), pp. 1-24 in Zootaxa 3108 on page 8
Brinkmanship on the Commons: A Laboratory Experiment Related to African Pulaar Herders
Creators: name: Wilhelms, Steven C.
name: Coatney, Kalyn T.
name: Chaudhry, Anita M.
name: Rodgers, Aaron D.
name: Wilhelms, Steven C.
name: Coatney, Kalyn T.
name: Chaudhry, Anita M.
name: Rodgers, Aaron D.
Publisher: name: Unknown
Year: 2016
Subjects: subject: Environmental Economics and Policy
subject: Institutional and Behavioral Economics
subject: Livestock Production/Industries
subject: Remittances
subject: Commons Resource
subject: Brinksmanship
subject: War of Attrition
subject: Experiment

description: Heterogeneous forage utilization by free ranging livestock in Senegal have been observed. This research addresses the changes in production practices and short run strategic implications of remittance investment in livestock. The resulting model is one of brinksmanship leading to a war-of-attrition over resource use. Laboratory experiments demonstrate heterogeneous outcomes ranging from cooperative economically efficient to heavier exploitation of the resource. Though consistent with the findings from past long run analyses, these results are largely due to mixed strategies and behavioral attributes, such as assertive and aggressive behaviors not previously identified.
Additional file 1 of Similarity assessment by multivariate statistics method based on the distance between biosimilar and originator
Creators: name: Xu, Jian
name: Shao, Zhihui
name: Han, Xiaoxiong
name: Huang, Yingfeng
name: Zou, Xun
name: Shen, Yaling
Publisher: name: figshare
Year: 2021
Subjects: Biophysics
Biochemistry
Neuroscience
Biological Sciences not elsewhere classified

description: Additional file 1: Table S1. The top 10 pharmaceutical products sold in 2019. Fig. S1. Viable cell density variation of 30 shaker flask runs by the culture time. Fig. S2 Viability variation of 30 shake flask runs by the culture time. Fig. S3 Residual glucose variation of 30 shake flask runs by the culture time.
Energy correlations in the end-point region
Creators: name: Korchemsky, G. P.
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The energy-energy correlation (EEC) measures the angular distribution of the energy that flows through two calorimeters separated by some relative angle in the final state created by a source. We study this observable in the limit of small and large angles when it describes the correlation between particles belonging, respectively, to the same jet and to two almost back-to-back jets. We present a new approach to resumming large logarithmically enhanced corrections in both limits that exploits the relation between the energy correlations and four-point correlation functions of conserved currents. At large angle, we derive the EEC from the behaviour of the correlation function in the limit when four operators are light-like separated in a sequential manner. At small angle, in a conformal theory, we obtain the EEC from resummation of the conformal partial wave expansion of the correlation function at short-distance separation between the calorimeters. In both cases, we obtain a concise representation of the EEC in terms of the conformal data of twist-two operators and verify it by comparing with the results of explicit calculation at next-to-next-to-leading order in maximally supersymmetric Yang-Mills theory. As a byproduct of our analysis, we predict the maximal weight part of the analogous QCD expression in the back-to-back limit.
description: 31 pages, 1 figure
MOESM2 of The Transposon Registry
Creators: name: Supathep Tansirichaiya
name: Md. Rahman
name: Roberts, Adam
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 2: Table S2. List of transposons associated with antibiotic resistance genes (DOCX 24 kb)
Excited State TBA for the $ϕ_{2,1}$ perturbed $M_{3,5}$ model
Creators: name: Ellem, R. M.
name: Bazhanov, V. V.
Publisher: name: arXiv
Year: 2002
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We examine some excited state energies in the non-unitary integrable quantum field theory obtained from the perturbation of the minimal conformal field theory model $M_{3,5}$ by its operator $ϕ_{2,1}$. Using the correspondence of this IQFT to the scaling limit of the dilute $A_2$ lattice model (in a particular regime) we derive the functional equations for the QFT commuting transfer matrices. These functional equations can be transformed to a closed set of TBA-like integral equations which determine the excited state energies in the finite-size system. In particular, we explicitly construct these equations for the ground state and two lowest excited states. Numerical results for the associated energy gaps are compared with those obtained by the truncated conformal space approach (TCSA).
description: LaTeX, 32 pages, 6 figures
A Different Angle on Quantum Uncertainty (Measure Angle)
Creators: name: Horváth, Ivan
name: Mendris, Robert
Publisher: name: arXiv
Year: 2019
Subjects: subject: Quantum Physics (quant-ph)
subject: High Energy Physics - Lattice (hep-lat)
subject: High Energy Physics - Theory (hep-th)
subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: The uncertainty associated with probing the quantum state is expressed as the effective abundance (measure) of possibilities for its collapse. New kinds of uncertainty limits entailed by quantum description of the physical system arise in this manner.
description: 10 pages, 3 figures. Talk at the 7th International Conference on New Frontiers in Physics (ICNFP2018), 4-12 July 2018, Kolymbari, Crete
MOESM1 of The Transposon Registry
Creators: name: Supathep Tansirichaiya
name: Md. Rahman
name: Roberts, Adam
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Computational Biology

description: Additional file 1: Table S1. Details of transposon records available in The Transposon Registry (DOCX 529 kb)
Apparent phase transitions in finite one-dimensional sine-Gordon lattices
Creators: name: Ares, Saul
name: Cuesta, Jose A.
name: Sanchez, Angel
name: Toral, Raul
Publisher: name: arXiv
Year: 2002
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Mathematical Physics (math-ph)
subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences

description: We study the one-dimensional sine-Gordon model as a prototype of roughening phenomena. In spite of the fact that it has been recently proven that this model can not have any phase transition [J. A. Cuesta and A. Sanchez, J. Phys. A 35, 2373 (2002)], Langevin as well as Monte Carlo simulations strongly suggest the existence of a finite temperature separating a flat from a rough phase. We explain this result by means of the transfer operator formalism and show as a consequence that sine-Gordon lattices of any practically achievable size will exhibit this apparent phase transition at unexpectedly large temperatures.
description: 7 pages, 4 figures
Gromilus striatus
Creators: name: Morrone, Juan J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Gromilus
Gromilus striatus

description: Gromilus striatus (Broun, 1915)
 Clypeorhynchus striatus Broun, 1915: 333 (type locality: New Zealand: Mount Hutt; type material: H: BMNH). Gromilus striatus; Kuschel, 1964: 459.
 Distribution. New Zealand (Schenkling and Marshall, 1929).
description: Published as part of Morrone, Juan J., 2011, Annotated checklist of the tribe Listroderini (Coleoptera: Curculionidae: Cyclominae) 3119, pp. 1-68 in Zootaxa 3119 (1) on page 24, DOI: 10.11646/zootaxa.3119.1.1, http://zenodo.org/record/5246257
Making a supermassive star by stellar bombardment
Creators: name: Tagawa, Hiromichi
name: Haiman, Zoltan
name: Kocsis, Bence
Publisher: name: arXiv
Year: 2019
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: Approximately two hundred supermassive black holes (SMBHs) have been discovered within the first $\sim$Gyr after the Big Bang. One pathway for the formation of SMBHs is through the collapse of supermassive stars (SMSs). A possible obstacle to this scenario is that the collapsing gas fragments and forms a cluster of main-sequence stars. Here we raise the possibility that stellar collisions may be sufficiently frequent and energetic to inhibit the contraction of the massive protostar, avoiding strong UV radiation driven outflows, and allowing it to continue growing into an SMS. We investigate this scenario with semianalytic models incorporating star formation, gas accretion, dynamical friction from stars and gas, stellar collisions, and gas ejection. We find that when the collapsing gas fragments at a density of $\lesssim 3\times 10^{10}\,\mathrm{cm^{-3}}$, the central protostar contracts due to infrequent stellar mergers, and in turn photoevaporates the remaining collapsing gas, resulting in the formation of a $\lesssim 10^4~{\rm M_\odot}$ object. On the other hand, when the collapsing gas fragments at higher densities (expected for a metal-poor cloud with $Z\lesssim10^{-5}\,{\rm Z_\odot}$ with suppressed ${\rm H_2}$ abundance) the central protostar avoids contraction and keeps growing via frequent stellar mergers, reaching masses as high as $\sim 10^5-10^6\,{\rm M_\odot}$. We conclude that frequent stellar mergers represent a possible pathway to form massive BHs in the early universe.
description: 20 pages, 8 figures, accepted in ApJ
Cotton Premium Rate Heterogeneities and Implications under Climate Change
Creators: name: Siameh, Celestine
name: Tack, Jesse
name: Barnett, Barry J.
name: Harri, Ardian
name: Siameh, Celestine
name: Tack, Jesse
name: Barnett, Barry J.
name: Harri, Ardian
Publisher: name: Unknown
Year: 2016
Subjects: subject: Agricultural and Food Policy
subject: Environmental Economics and Policy
subject: Cotton
subject: yield risk
subject: Heterogeneities
subject: premium rates
subject: climate change

description: Response to adverse weather conditions by cotton and other major crops are likely to be heterogeneous across varieties, but it is unclear whether this translates into yield risk heterogeneity across varieties. Crop insurance is the dominant agricultural policy instrument and will play an important role for any potential adaptation path to climate change. However, the impact of climate change on the performance of crop insurance programs is not well established and currently the Risk Management Agency does not offer alternative premium rates across varieties. This study utilizes Mississippi cotton variety trial data for the period 1998 to 2013 to identify whether there are heterogeneous crop insurance premium rates across varieties using a moment-based model. Warming impacts on these rates will then be measured. Our results identified heterogeneities for both the mean and variance of cotton yields across varieties. These differences extended to the coefficient of variation – a commonly used measure of yield risk – as well as actuarially fair premium rates, which capture a producer’s exposure to downside risk. Our findings provide evidence of yield risk heterogeneity across varieties. The finding of heterogeneous premium rates across varieties presents an interesting problem for the FCIP.
B-meson dileptonic decays enhanced by supersymmetry with large $\tanβ$
Creators: name: Xiong, Zhaohua
name: Yang, Jin Min
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We examined the rare decays $B\to X_s\ell^+\ell^-$ and $B_s\to\ell^+\ell^-γ$ in the minimal supersymmetric model with large $\tanβ$. Taking into account the gluino-loop and neutralino-loop effects, we found that for a large $\tanβ$ the neutral Higgs exchanging diagrams could enhance $Br(B\to X_sτ^+τ^-)$ by a factor of 5 and $Br(B_s\toτ^+τ^-γ)$ by a couple of orders in some part of supersymmetric parameter space allowed by current experiments such as $b\to sγ, B\to K^{(*)}\ell^+\ell^-$ and $B_s\to\ell^+\ell^-$. The forward-backward asymmetry and the distributions of differential branching ratios are also found to differ significantly from the standard model results. Such enhanced branching ratios reach the level of $10^{-5}$ and thus might be observable in the new generation of B experiments.
description: 17 pages,9 figures, a detail contribution and reference added
Additional file 7 of Standardization of electrolyte leakage data and a novel liquid nitrogen control improve measurements of cold hardiness in woody tissue
Creators: name: Kovaleski, Alisson P.
name: Grossman, Jake J.
Publisher: name: figshare
Year: 2021
Subjects: subject: Biotechnology
subject: Ecology
subject: FOS: Biological sciences
subject: Plant Biology

description: Additional file 7: Figure S6. Stem segments incubated for longer than five days following control treatment (boiling or liquid nitrogen immersion) tended to deteriorate, showing evidence of microbial growth.
Additional file 1 of Validation of an MRI-only planning workflow for definitive pelvic radiotherapy
Creators: name: O’Connor, Laura M.
name: Dowling, Jason A.
name: Choi, Jae Hyuk
name: Martin, Jarad
name: Warren-Forward, Helen
name: Richardson, Haylea
name: Best, Leah
name: Skehan, Kate
name: Kumar, Mahesh
name: Govindarajulu, Geetha
name: Sridharan, Swetha
name: Greer, Peter B.
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Cell Biology
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Additional file 1. DVH data collection table. Organ at risk and target volume DVH parameters assessed by treatment site.
Bias Properties of Extragalactic Distance Indicators.XI. Methods to Correct for Observational Selection Bias for RR Lyrae Absolute Magnitudes from Trigonometric Parallaxes Expected from the FAME Astrometric Satellite
Creators: name: Sandage, Allan
name: Saha, A.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Please note that this abstract has been shortened from that found in the paper. A brief history is given of the development of the correction for observation selection bias inherent in the calibration of absolute magnitudes using trigonometric parallaxes. As a tutorial to gain an intuitive understanding of several complicated trigonometric bias problems, we study a toy bias model of a parallax catalog which incorporates assumed parallax measuring errors of various severities. The two effects of bias errors on the derived absolute magnitudes are (1) the Lutz-Kelker correction itself that depends on the fractional parallax error and the spatial distribution, and (2) a Malmquist-like `incompleteness' correction of opposite sign due to various apparent magnitude cut-offs as they are progressively imposed on the catalog. The simulations involve 3 million stars spread with varying density distributions in a volume bounded by a radius of 50,000 pc. A fixed absolute magnitude of M_V = +0.6 is used to imitate RR Lyrae variables in the mean. The bias is demonstrated for various assumed spatial densities and parallax error models, including one that is projected for the FAME satellite. The effects of imposing magnit ude limits and limits on the `observer's' error are displayed. We contrast the method of calculating mean absolute magnitude directly from the parallaxes where bias corrections are mandatory, with an inverse method using maximum likelihood which is free of the Lutz-Kelker bias, although a Malmquist bias is present. We discuss the level of accuracy that can be expected in a calibration of RR Lyrae absolute magnitudes from the FAME data over the metallicity range of [Fe/H] from 0 to -2, given the known frequency of the local RR Lyraes closer than 1.5 kpc.
description: to appear in the Astronomical Journal
Additional file 2 of Validation of an MRI-only planning workflow for definitive pelvic radiotherapy
Creators: name: O’Connor, Laura M.
name: Dowling, Jason A.
name: Choi, Jae Hyuk
name: Martin, Jarad
name: Warren-Forward, Helen
name: Richardson, Haylea
name: Best, Leah
name: Skehan, Kate
name: Kumar, Mahesh
name: Govindarajulu, Geetha
name: Sridharan, Swetha
name: Greer, Peter B.
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Cell Biology
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Additional file 2. Detailed DVH results table. Organ at risk and target volume DVH dose difference separated by individual parameters for male and female cohorts. Note: Some structure parameters are not included as sample size is too small for individual analysis.
Additional file 1 of Optimization of tetramycin production in Streptomyces ahygroscopicus S91
Creators: name: Chen, Guang
name: Mengqiu Wang
name: Xianpu Ni
name: Huanzhang Xia
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified

description: Additional file 1: Figure S1. Biosynthesis of tetramycin.
Quasi-automatic groups are asynchronously automatic
Creators: name: Blanchette, Benjamin
Publisher: name: arXiv
Year: 2019
Subjects: subject: Group Theory (math.GR)
subject: Computational Complexity (cs.CC)
subject: Formal Languages and Automata Theory (cs.FL)
subject: Combinatorics (math.CO)
subject: FOS: Mathematics
subject: FOS: Computer and information sciences

description: A quasi-automatic semigroup is a finitely generated semigroup with a rational set of representatives such that the graph of right multiplication by any generator is a rational relation. A asynchronously automatic semigroup is a quasi-automatic semigroup for which these rational relations are also recognisable by two-tape automata. We show that when such a semigroup happens to be a group, the converse actually holds, meaning quasi-automatic groups are asynchronously automatic.
description: Short note, 5 pages, complementing a previous paper named Quasi-automatic Semigroups by Blanchette, Choffrut and Reutenauer
Additional file 1 of Innovative and conventional “conservative” technologies for the treatment of uterine fibroids in Italy: a multidimensional assessment
Creators: name: Ferrario, L.
name: Garagiola, E.
name: Gerardi, C.
name: Bellavia, G.
name: Colombo, S.
name: Ticca, C.
name: Rossetti, C.
name: Ciboldi, M.
name: Meroni, M.
name: Vanzulli, A.
name: Rampoldi, A.
name: Bignardi, T.
name: Arrigoni, F.
name: Porazzi, E.
name: Foglia, E.
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy

description: Additional file 1.
title: Tomatenunterlagen :
title: Richtlinien für die Durchführung der Prüfung auf Unterscheidbarkeit, Homogenität und Beständigkeit.
titleType: Subtitle
Creators: name: International Union For The Protection Of New Varieties Of Plants,
Publisher: name: International Union for the Protection of New Varieties of Plants,
Year: 0
Subjects: Plants
New Varieties of Plants
Tomato Rootstocks

description: Zweck dieser Richtlinien („Prüfungsrichtlinien“) ist es, die in der Allgemeinen Einführung (Dokument TG/1/3) und deren verbundenen TGP-Dokumenten enthaltenen Grundsätze in detaillierte praktische Anleitung für die harmonisierte Prüfung der Unterscheidbarkeit, der Homogenität und der Beständigkeit (DUS) umzusetzen und insbesondere geeignete Merkmale für die DUS-Prüfung und die Erstellung harmonisierter Sortenbeschreibungen auszuweisen.
Semi-empirical relationships to assess the seismic performance of slopes from an updated version of the Italian seismic database
Creators: name: Gaudio, D.
name: Rauseo, R.
name: Masini, L.
name: Rampello, S.
Publisher: name: Apollo - University of Cambridge Repository
Year: 2020
Subjects: Original Research
Italian seismic database
Permanent displacement
Semi-empirical relationship
Pseudo-static approach
Seismic coefficient
Slope

description: Funder: Dipartimento della Protezione Civile, Presidenza del Consiglio dei Ministri; doi: http://dx.doi.org/10.13039/100012783; Grant(s): ReLUIS research project - Working Pachage 16: Geotechnical Engineering - Task Group 2: Slope stability
description: Abstract: Seismic performance of slopes can be assessed through displacement-based procedures where earthquake-induced displacements are usually computed following Newmark-type calculations. These can be adopted to perform a parametric integration of earthquake records to evaluate permanent displacements for different slope characteristics and seismic input properties. Several semi-empirical relationships can be obtained for different purposes: obtaining site-specific displacement hazard curves following a fully-probabilistic approach, to assess the seismic risk associated with the slope; providing semi-empirical models within a deterministic framework, where the seismic-induced permanent displacement is compared with threshold values related to different levels of seismic performance; calibrating the seismic coefficient to be used in pseudo-static calculations, where a safety factor against limit conditions is computed. In this paper, semi-empirical relationships are obtained as a result of a parametric integration of an updated version of the Italian strong-motion database, that, in turn, is described and compared to older versions of the database and to well-known ground motion prediction equations. Permanent displacement is expressed as a function of either ground motion parameters, for a given yield seismic coefficient of the slope, or of both ground motion parameters and the seismic coefficient. The first are meant to be used as a tool to develop site-specific displacement hazard curves, while the last can be used to evaluate earthquake-induced slope displacements, as well as to calibrate the seismic coefficient to be used in a pseudo-static analysis. Influence of the vertical component of seismic motion on these semi-empirical relationships is also assessed.
Did technical change in agricultural production decrease the emission of pollutants on the Amazon Forest during 1990-2009?
Creators: name: Silva, Felipe
name: Fulginiti, Lilyan E.
name: Perrin, Richard K.
name: Silva, Felipe
name: Fulginiti, Lilyan E.
name: Perrin, Richard K.
Publisher: name: Unknown
Year: 2016
Subjects: subject: Environmental Economics and Policy
subject: Production Economics
subject: Productivity Analysis
subject: Amazon forest
subject: Agriculture
subject: Greenhouse gasses and Technical change.

description: The Amazon Forest is the largest tropical forest in the world stretching over nine states in northern Brazil. Land use in the Amazon Forest has been under discussion due to its direct and indirect effects on emission and sequestration of greenhouse gases (GHGs) such as CO2, N2O and CH4. Our interest here is to investigate whether technological change in agriculture has resulted in higher or lower costs of emissions abatement. We examined a panel of nine states from this region during the period 1990-2009, a period of rapid agricultural expansion as well as a series of new environmental regulations. The rate of technical change and its biases were estimated using stochastic and non-stochastic approaches. Preliminary results indicate a technological progress for Brazilian’s Amazon Forest states, which suggests a simultaneously expansion on GDP and contracted on CO2e emissions due to technical change. This technical change has been biased toward GDP and against emissions, indicating an increase in GDP foregone to achieve a given reduction in emissions.
The Influence of Underlying Stresses from Environmental Hazards on Resilience in Bangladesh: A System View
Creators: name: Lake, Philip
name: Fenner, Richard
Publisher: name: Apollo - University of Cambridge Repository
Year: 2019
Subjects: Article
Air pollution
Arsenic contamination
Bangladesh
Drinking water contamination
Environmental hazards
Resilience

description: Abstract: Bangladesh is one of the countries most vulnerable to climate change, while its people also suffer from a range of environmental hazards linked to the growing prevalence of non-communicable diseases. These diseases are responsible for increasing morbidity and mortality and lead to other stresses within the population. Such stresses create continuous impacts on the health and well-being of the population, compounding their vulnerability and inhibiting their capacity to cope with frequent event-related shocks, such as floods and drought. A systems approach is taken to examine four important environmental hazards in Bangladesh—arsenic contamination of drinking water, arsenic transmission through the food chain, indoor air quality, and air pollution. A review of these hazards is presented in a conceptual framework that links human well-being with the key system components of infrastructure, institutions, knowledge, and behavior. This reveals key underlying factors between the hazards and uncovers system structures that can lead to more effective hazard mitigation, and the establishment of strategic intervention points. The article concludes that elimination of these continuous stresses will only come about through the culmination of multiple interventions over time, undertaken in an iterative manner that builds on the continual advancement of hazard understanding. The role of individual behaviors, together with factors such as risk awareness and perception of the hazards, has been identified as crucial for achieving successful mitigation solutions. Improved knowledge of the hazards, public awareness, and government accountability are focus points to reduce population exposure and enhance response capacity.
Additional file 1 of Comparing rates of mycobacterial clearance in sputum smear-negative and smear-positive adults living with HIV
Creators: name: Machowski, Edith E.
name: Matebogo Letutu
name: Limakatso Lebina
name: Ziyaad Waja
name: Reginah Msandiwa
name: Milovanovic, Minja
name: Gordhan, Bhavna G.
name: Otwombe, Kennedy
name: Friedrich, Sven O.
name: Chaisson, Richard
name: Diacon, Andreas H.
name: Bavesh Kana
name: Martinson, Neil
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: FOS: Biological sciences
subject: Computational Biology

description: Additional file 1: Supplementary Table S1.
Intercellular communication induces glycolytic synchronization waves between individually oscillating cells
Creators: name: Mojica-Benavides, Martin
name: van Niekerk, David D.
name: Mijalkov, Mite
name: Snoep, Jacky L.
name: Mehlig, Bernhard
name: Volpe, Giovanni
name: Goksör, Mattias
name: Adiels, Caroline B.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Biological Physics (physics.bio-ph)
subject: Soft Condensed Matter (cond-mat.soft)
subject: Cell Behavior (q-bio.CB)
subject: FOS: Physical sciences
subject: FOS: Biological sciences

description: Metabolic oscillations in single cells underlie the mechanisms behind cell synchronization and cell-cell communication. For example, glycolytic oscillations mediated by biochemical communication between cells may synchronize the pulsatile insulin secretion by pancreatic tissue, and a link between glycolytic synchronization anomalies and type-2 diabetes has been hypotesized. Cultures of yeast cells have provided an ideal model system to study synchronization and propagation waves of glycolytic oscillations in large populations. However, the mechanism by which synchronization occurs at individual cell-cell level and overcome local chemical concentrations and heterogenic biological clocks, is still an open question because of experimental limitations in sensitive and specific handling of single cells. Here, we show how the coupling of intercellular diffusion with the phase regulation of individual oscillating cells induce glycolytic synchronization waves. We directly measure the single-cell metabolic responses from yeast cells in a microfluidic environment and characterize a discretized cell-cell communication using graph theory. We corroborate our findings with simulations based on a kinetic detailed model for individual yeast cells. These findings can provide insight into the roles cellular synchronization play in biomedical applications, such as insulin secretion regulation at the cellular level.
description: 10 pages, 5 figures
Additional file 2 of Innovative and conventional “conservative” technologies for the treatment of uterine fibroids in Italy: a multidimensional assessment
Creators: name: Ferrario, L.
name: Garagiola, E.
name: Gerardi, C.
name: Bellavia, G.
name: Colombo, S.
name: Ticca, C.
name: Rossetti, C.
name: Ciboldi, M.
name: Meroni, M.
name: Vanzulli, A.
name: Rampoldi, A.
name: Bignardi, T.
name: Arrigoni, F.
name: Porazzi, E.
name: Foglia, E.
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy

description: Additional file 2.
Il tempo è una risorsa preziosa: voci contro le procedure accelerate di asilo
Creators: name: Olivieri, Lorenzo
Publisher: name: Eurac Research
Year: 2025

description: Le procedure accelerate hanno lo scopo di velocizzare la decisione sulle domande di asilo politico. Le testimonianze di persone richiedenti asilo, ma anche di avvocate e mediatrici culturali, rivelano come l’accelerazione comporti diverse conseguenze deleterie. La minore durata delle procedure rende infatti complesso sia raccogliere informazioni potenzialmente decisive per il proprio caso sia sviluppare rapporti di fiducia con le figure professionali di supporto.
CP and Flavour in Effective Type I String Models
Creators: name: Abel, S. A
name: Servant, G.
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Effective type I string models allow stabilization of the dilaton and moduli fields with only a single gaugino condensate. We show that, as well as breaking supersymmetry, the stabilization can spontaneously break CP. We find that this source of CP violation hints strongly at a natural solution to the supersymmetric CP and flavour problems. Even though the CP violation generates physical phases in the Yukawa couplings, all the supersymmetry breaking terms are found to be automatically real and given by the U(1) charges of the associated Yukawa couplings. These can be chosen to have a structure (degenerate or non-universal) which suppresses FCNCs and EDMs. We examine the phenomenological implications, including the generation of the $μ$-term, and the effect of higher order terms.
description: 35 pages, 3 figures; v2: 1 reference added; v3: 2 references added, 1 misprint corrected, version to be published in NPB
Pseudomode approach and vibronic non-Markovian phenomena in light harvesting complexes
Creators: name: Teretenkov, A. E.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Quantum Physics (quant-ph)
subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: The pseudomode approach is discussed with an emphasis to Gorini-Kossakowski-Sudarshan-Lindblad form of this approach. The connection of the pseudomode approach with solutions of both the Friedrichs model and Jaynes-Cummings model with dissipation at zero temperature is shown. The obtained results are applied to non-Markovian phenomena description in the Fenna-Matthews-Olson complexes, estimations based on experimental data are done. A deformation approach to generalization of the pseudomode approach to the finite-temperature case is discussed.
description: The research was supported by RSF (project No. {\guillemotleft}17-71-20154{\guillemotright})
Gromilus tenuiculus
Creators: name: Morrone, Juan J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Gromilus
Gromilus tenuiculus

description: Gromilus tenuiculus (Broun, 1921)
 Clypeorhynchus tenuiculus Broun, 1921: 641 (type locality: New Zealand; type material: S: BMNH).
 Gromilus tenuiculus; Kuschel, 1964: 459.
 Distribution. New Zealand (Schenkling and Marshall, 1929).
description: Published as part of Morrone, Juan J., 2011, Annotated checklist of the tribe Listroderini (Coleoptera: Curculionidae: Cyclominae) 3119, pp. 1-68 in Zootaxa 3119 (1) on page 25, DOI: 10.11646/zootaxa.3119.1.1, http://zenodo.org/record/5246257
Additional file 2 of Optimization of tetramycin production in Streptomyces ahygroscopicus S91
Creators: name: Chen, Guang
name: Mengqiu Wang
name: Xianpu Ni
name: Huanzhang Xia
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified

description: Additional file 2: Figure S2. LC-MS analysis of tetramycin and nystatin in Streptomyces ahygroscopicus S91. a. The HPLC profile of Streptomyces ahygroscopicus S91 fermentation products; b. The UV absorption spectra and MS of tetramycin B; c. The UV absorption spectra and MS of nystatin; d. The UV absorption spectra and MS of tetramycin A.
Estimating Citrus Production Loss due to Citrus Huanglongbing in Florida
Creators: name: Neupane, Diwash
name: Moss, Charles B.
name: Van Bruggen, Ariena H.C.
name: Neupane, Diwash
name: Moss, Charles B.
name: Van Bruggen, Ariena H.C.
Publisher: name: Unknown
Year: 2016
Subjects: subject: Crop Production/Industries
subject: citrus greening
subject: production loss
subject: probability loss

description: Huanglongbing (HLB) or citrus greening disease has jeopardized the Florida’s signature citrus industry that makes a valuable contribution towards state’s economy. Despite the rigorous efforts to control the disease impact, efficient management measures do not exist. There is limited information on the extent of the impact of the disease. This study provides the measure of the impact of the disease in terms of production loss. Using the regional level data on citrus yield and the tree population we quantified the loss and estimated the probability of loss due to the HLB. The findings demonstrate a substantial production loss in major counties in the Florida. The result further reveals a high probability of loss due to the disease. Higher likelihood of the production loss indicates the ineffectiveness on controlling the impact of the disease.
Molecular dynamics simulations assisted investigation of phytochemicals as potential lead candidates against anti-apoptotic Bcl-B protein
Creators: name: Bhati, Rittik
name: Zadeng, Hazel
name: Singh, Ekampreet
name: Kumar, Ankit
name: Jain, Monika
name: Kumaran, J. Senthil
name: Singh, Amit Kumar
name: Muthukumaran, Jayaraman
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Hematology
subject: Infectious Diseases
subject: FOS: Health sciences

description: Due to the multifarious nature of cancer, finding a single definitive cure for this dreadful disease remains an elusive challenge. The dysregulation of the apoptotic pathway or programmed cell death, governed by the Bcl-2 family of proteins plays a crucial role in cancer development and progression. Bcl-B stands out as a unique anti-apoptotic protein from the Bcl-2 family that selectively binds to Bax which inhibits its pro-apoptotic function. Although several inhibitors are reported for Bcl-2 family proteins, no specific inhibitors are available against the anti-apoptotic Bcl-B protein. This study aims to address this research gap by using virtual screening of an in-house library of phytochemicals from seven anti-cancer medicinal plants to identify lead molecules against Bcl-B protein. Through pharmacokinetic analysis and molecular docking studies, we identified three lead candidates (Enterolactone, Piperine, and Protopine) based on appreciable drug-likeliness, ADME properties, and binding affinity values. The identified molecules also exhibited specific interactions with critical amino acid residues of the binding cleft, highlighting their potential as lead candidates. Finally, molecular dynamics simulations and MM/PBSA based binding free energy analysis revealed that Enterolactone (CID_114739) and Piperine (CID_638024) molecules were on par with Obatoclax (CID_11404337), which is a known inhibitor of the Bcl-2 family proteins.
Shortest and Straightest Geodesics in Sub-Riemannian Geometry
Creators: name: Alekseevsky, Dmitri V.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Differential Geometry (math.DG)
subject: FOS: Mathematics
subject: 53C17, 53C22, 53C30

description: There are many equivalent definitions of Riemannian geodesics. They are naturally generalised to sub-Riemannian manifold, but become non-equivalent. We give a review of different definitions of geodesics of a sub-Riemannian manifold and interrelation between them. We recall three variational definitions of geodesics as (locally) shortest curves (Euler-Lagrange, Pontyagin and Hamilton) and three definitions of geodesics as straightest curves (d'Alembert , Levi-Civita-Schouten and Cartan-Tanaka ), used in nonholonomic mechanics and discuss their interrelations. We consider a big class of sub-Riemannian manifolds associated with principal bundle over a Riemannian manifolds, for which shortest geodesics coincides with straightest geodesics. Using the geometry of flag manifolds, we describe some classes of compact homogeneous sub-Riemannian manifolds (including contact sub-Riemannian manifolds and symmetric sub-Riemannian manifolds) where straightest geodesics coincides with shortest geodesics. Construction of geodesics in these cases reduces to description of Riemannian geodesics of the Riemannian homogeneous manifold or left-invariant metric on a Lie group.
description: 35 pages