cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Integrated Data Acquisition, Storage, Retrieval and Processing Using the COMPASS DataBase (CDB)
Creators: name: Urban, J.
name: Pipek, J.
name: Hron, M.
name: Janky, F.
name: Papřok, R.
name: Peterka, M.
name: Duarte, A. S.
Publisher: name: arXiv
Year: 2014
Subjects: subject: Databases (cs.DB)
subject: FOS: Computer and information sciences

description: We present a complex data handling system for the COMPASS tokamak, operated by IPP ASCR Prague, Czech Republic [1]. The system, called CDB (Compass DataBase), integrates different data sources as an assortment of data acquisition hardware and software from different vendors is used. Based on widely available open source technologies wherever possible, CDB is vendor and platform independent and it can be easily scaled and distributed. The data is directly stored and retrieved using a standard NAS (Network Attached Storage), hence independent of the particular technology; the description of the data (the metadata) is recorded in a relational database. Database structure is general and enables the inclusion of multi-dimensional data signals in multiple revisions (no data is overwritten). This design is inherently distributed as the work is off-loaded to the clients. Both NAS and database can be implemented and optimized for fast local access as well as secure remote access. CDB is implemented in Python language; bindings for Java, C/C++, IDL and Matlab are provided. Independent data acquisitions systems as well as nodes managed by FireSignal [2] are all integrated using CDB. An automated data post-processing server is a part of CDB. Based on dependency rules, the server executes, in parallel if possible, prescribed post-processing tasks.
One-Stop Shopping with Search and Upload
Publisher: name: University of Virginia
Year: 2018
Subjects: samvera
repository
libra

description: The University of Virginia has three separate scholarly repositories (research repositories/non-Library collection). To help depositors, we created a landing page. http://libra.virginia.edu is one-stop link to deposit ETDs,Open Works and Datasets.

 For ease of discovery, all content from LibraETD, LibraOpen and LibraData is discoverable in our Library catalog (Blacklight). Each night the content from Sufia-Solr (and Dataverse Solr index) is sent to Virgo-Solr and re-indexed with all other Virgo-Solr content. “Access Online” links directly to the DOI and landing page for each work (or dataset).
Additional file 1 of Valorization of organic waste fractions: a theoretical study on biomethane production potential and the recovery of N and P in Austria
Creators: name: Rosenfeld, Daniel C.
name: Lindorfer, Johannes
name: Ellersdorfer, Markus
Publisher: name: figshare
Year: 2020
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Table S1. Recovery methods, products and efficiencies according to literature - (1) manure, (2) straw, (3) waste from food production, (4) other biogenic wastes, (5) biowaste from households, (6) bush-, grass- and tree cuts, (7) sewage sludge. Table S2. Substrate potential for the different Austrian states (Bundesanstalt für Agrarwirtschaft, 2016; Bundesministerium Nachhaltigkeit und Tourismus, 2019; FNR, 2013; Reisinger, 2012; Universität Rostock, 2007).
Next-to-eikonal corrections in the CGC: gluon production and spin asymmetries in pA collisions
Creators: name: Altinoluk, Tolga
name: Armesto, Néstor
name: Beuf, Guillaume
name: Martínez, Mauricio
name: Salgado, Carlos A.
Publisher: name: arXiv
Year: 2014
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We present a new method to systematically include corrections to the eikonal approximation in the background field formalism. Specifically, we calculate the subleading, power-suppressed corrections due to the finite width of the target or the finite energy of the projectile. Such power-suppressed corrections involve Wilson lines decorated by gradients of the background field - thus related to the density - of the target. The method is of generic applicability. As a first example, we study single inclusive gluon production in pA collisions, and various related spin asymmetries, beyond the eikonal accuracy.
description: 34 pages, new reference added, some typos corrected
Heteroderes spinicollis Candeze 1859
Creators: name: Kotru, Akash
name: Chandran, Nithya
name: Dubey, Anil Kumar
name: Prosvirov, Alexander S.
Publisher: name: Zenodo
Year: 2025
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Elateridae
Heteroderes
Heteroderes spinicollis

description: Heteroderes spinicollis Candèze, 1859
Heteroderes spinicollis Candèze, 1859: 360.
Type depository. Unknown.
Type locality. “De Ille de Ceylan ”.
Distribution. India: West Bengal, Tripura. Elsewhere: Sri Lanka (Chakraborthy and Chakrabarthy, 2006).
Literature. Candèze (1859: 360): original description; Biswas and Chakraborty (2000: 104): faunistics; Chakraborty and Chakrabarti (2006: 126): records of the zoological survey of India, occasional paper no. 254.
description: Published as part of Kotru, Akash, Chandran, Nithya, Dubey, Anil Kumar & Prosvirov, Alexander S., 2025, A catalogue of Indian Agrypninae Candèze, 1857 (Coleoptera: Elateridae), pp. 1-66 in Zootaxa 5614 (1) on page 46, DOI: 10.11646/zootaxa.5614.1.1, http://zenodo.org/record/15217075
Additional file 1 of Combined frequency-tagging EEG and eye-tracking measures provide no support for the “excess mouth/diminished eye attention” hypothesis in autism
Creators: name: Vettori, Sofie
name: Donck, Stephanie Van Der
name: Nys, Jannes
name: Moors, Pieter
name: Wesemael, Tim Van
name: Steyaert, Jean
name: Rossion, Bruno
name: Dzhelyova, Milena
name: Boets, Bart
Publisher: name: figshare
Year: 2020
Subjects: subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1. Figure S1. Fixation data of all participants. As an illustration, using color, we differentiate between the four AOI regions and data falling outside the AOIs (purple). Fixations out of these AOIs were removed by constructing a limited radius Voronoi partitioning (with a maximum radius of 100 pixels). Additionally, to remove the effects of participants gazing at the edge of the image or outside the image, we limited the dataset to those data falling inside the face image, where a margin of 50 pixels is taken into account.
Additional file 1 of Enhanced bodily states of fear facilitates bias perception of fearful faces
Creators: name: Won-Mo Jung
name: Ye-Seul Lee
name: Lee, In-Seon
name: Wallraven, Christian
name: Yeonhee Ryu
name: Chae, Younbyoung
Publisher: name: figshare
Year: 2020
Subjects: subject: Neuroscience
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Cardiology

description: Additional file 1: Table S1. Additional tables.
D5.1 - Report with review of existing impact evaluations systems
Creators: name: Prevoo, Mariëlle
name: Sušanj, Zoran
name: Golob, Boris
name: Zubić, Nikoleta
Publisher: name: Zenodo
Year: 2021
Subjects: Doctoral training, transferable skills, entrepreneurship, innovation, Open Science, graduate tracking

description: This report is written within Work Package (WP) 5 of the DIOSI project (Developing and Implementing hands-on training on Open Science and Open Innovation for Early Career Researchers). The main goal of the Work Package is to enable measurable and actionable impact assessment of doctoral education in general, and of the Open Innovation and Entrepreneurship and Open Science courses in particular, through the development of the DIOSI Impact and graduate tracking framework. The review of existing impact evaluation systems described in this report is supposed to be a first step towards the development of that framework. As such, all methods and tools included in the review focus – at least to a certain extent – on evaluating the immediate and/or long-term impact of doctoral education.
 The report is based on an extensive review of impact evaluation methods and tools described in literature, ranging from projects focused on the development of a graduate tracking system to research into the career trajectories of PhD graduates.
 The report describes European initiatives for a graduate tracking system, as well as studies looking into careers of PhD graduates and/or the impact of doctoral education on skills and later outcomes of PhD graduates. Not only is the content and usefulness of the tools used reviewed, findings that could be relevant for the later development of the DIOSI Impact and graduate tracking framework, such as categorizations of skills or occupations, are also summarized. Moreover, the report describes different methodologies for graduate tracking along with the pros and cons of (a combination of) methods. This includes register-based vs. survey-based tracking, and within survey-based tracking the methods of 1.) graduate surveys, 2.) longitudinal cohort surveys, 3.) cross-sectional survey. Special attention is paid to finding a balance between cross-country comparability and institutional-level implementation. In order to maintain this balance, a mixture of joint decision making and individual responsibility for submission to graduates is suggested as a suitable solution for the European universities included in the DIOSI project.
Data Purchase Program: Lessons Learned
Publisher: name: University of Virginia
Year: 2019
Subjects: data librarianship
data collections

description: The Data Purchase Program at the University of Virginia Library was created in order to formalize and rationalize our data purchases. In the past, we were willing to make data purchases, but patrons had to know to ask (and had to ask at the right point in the budget cycle). The Data Purchase Program gave us something specific to direct patrons to. Formalizing the program allowed us to do better outreach and marketing for this service. We also rationalized the process of purchasing patron-requested data by gathering all of the requests at once and comparing costs and impact. 

Presented at IASSIST 2018 Conference.
Heteroderes subtilis Jagemann 1945
Creators: name: Kotru, Akash
name: Chandran, Nithya
name: Dubey, Anil Kumar
name: Prosvirov, Alexander S.
Publisher: name: Zenodo
Year: 2025
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Elateridae
Heteroderes
Heteroderes subtilis

description: Heteroderes subtilis Jagemann, 1945
Heteroderes subtilis Jagemann, 1945: 40.
Type depository. Unknown.
Type locality. Punjab (Pathankot).
Distribution. India: Punjab. Elsewhere: Pakistan (Akhter et al. 2012).
Literature. Jangemann (1945: 40): original description.
description: Published as part of Kotru, Akash, Chandran, Nithya, Dubey, Anil Kumar & Prosvirov, Alexander S., 2025, A catalogue of Indian Agrypninae Candèze, 1857 (Coleoptera: Elateridae), pp. 1-66 in Zootaxa 5614 (1) on page 46, DOI: 10.11646/zootaxa.5614.1.1, http://zenodo.org/record/15217075
Comparative study of RBE and cell survival fractions for $^{1}$H, $^{4}$He, $^{12}$C and $^{16}$O beams using Geant4 and Microdosimetric Kinetic model
Creators: name: Burigo, Lucas
name: Pshenichnov, Igor
name: Mishustin, Igor
name: Bleicher, Marcus
Publisher: name: arXiv
Year: 2014
Subjects: subject: Medical Physics (physics.med-ph)
subject: FOS: Physical sciences

description: Beams of $^{4}$He and $^{16}$O nuclei are considered for ion-beam cancer therapy as alternative options to protons and $^{12}$C nuclei. Spread-out Bragg peak (SOBP) distributions of physical dose and relative biological effectiveness for 10% survival are calculated by means of our Geant4-based Monte Carlo model for Heavy Ion Therapy (MCHIT) and the modified microdosimetric kinetic model. The depth distributions of cell survival fractions are calculated for $^{1}$H, $^{4}$He, $^{12}$C and $^{16}$O for tissues with normal (HSG cells), low and high radiosensitivity. In each case the cell survival fractions were compared separately for the target volume, behind and in front of it. In the case of normal radiosensitivity $^{4}$He and $^{12}$C better spare tissues in the entrance channel compared to protons and $^{16}$O. The cell survival fractions calculated, respectively, for the entrance channel and target volume are similar for $^{4}$He and $^{12}$C. When it is important to spare healthy tissues located after the distal edge of the SOBP plateau, $^{4}$He can be recommended due to reduced nuclear fragmentation of these projectiles. No definite advantages of $^{16}$O with respect to $^{12}$C were found, with the except of an enhanced impact of these heavier projectiles on radioresistant tumors.
Monocrepidius dulciculus Candeze 1897
Creators: name: Kotru, Akash
name: Chandran, Nithya
name: Dubey, Anil Kumar
name: Prosvirov, Alexander S.
Publisher: name: Zenodo
Year: 2025
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Elateridae
Monocrepidius
Monocrepidius dulciculus

description: Monocrepidius dulciculus Candèze, 1897
Monocrepidius dulciculus Candèze, 1897: 52.
Type depository. Unknown.
Type locality. “Bengale”.
Distribution. India: West Bengal, Madhya Pradesh.
Literature. Candèze (1897: 52): original description.
description: Published as part of Kotru, Akash, Chandran, Nithya, Dubey, Anil Kumar & Prosvirov, Alexander S., 2025, A catalogue of Indian Agrypninae Candèze, 1857 (Coleoptera: Elateridae), pp. 1-66 in Zootaxa 5614 (1) on page 47, DOI: 10.11646/zootaxa.5614.1.1, http://zenodo.org/record/15217075
Reference governors for systems with polynomial constraints: theory and extensions
Creators: name: Schieni, Rick
Publisher: name: No Publisher Supplied
Year: 2023

description: Controls engineering focuses around the design of processes which ensure the system to be controlled is stable, can track some desired performance, and can reject disturbances. A great number of effective control techniques have been developed which focus on the transient response of the system however, many of these control schemes do not take system constraints, such as actuator saturation, into account. With techniques established which produce a satisfactory transient response of the system, it is desired to preserve the response of the original control technique while ensuring the constraints on the system are satisfied. This desire has led to the development of the reference governor add-on schemewhich modifies the reference signal to a pre-existing nominal controller to ensure system constraints are satisfied. In this work, a reference governor add-on scheme is designed for linear systems subject to polynomial constraints. The system state vector is first augmented with the reference governor signal to create the augmented state vector. Employing the Kronecker product allows one to derive an extended state vector which encapsulates the higher order powersof the original augmented state. With the higher order powers integrated into the extended state, the polynomial constraints can be written as linear constraints in terms of the new base vectors. It is shown that the Maximal Output Admissible Set (MOAS) for the extended system is finitely determined and the MOAS for the original system is a cross section of the MOAS computed for the extended system. The methodology presented to handle linear systems subject to polynomial constraints is then extended to handle systems subject to external disturbances and parametric uncertainties. Exploiting the convexity of the problem, it’s shown that the MOAS of a system subject to uncertainties can be calculated using the known bounds of the uncertain parameters and disturbances. Further extensions are made to handle the problem where the polynomial constraints acting on the system are piecewise and dependent upon the current value of the state. It’s shown that the regions of applicability of the piecewise constraints can be propagated into the future to determine feasible regions in which the state may exist. Each proposed method is supported by numerical examples which present the efficacy of the methods. It’s shown that the strategies developed in this work are applicable to real-world systems such as bistable structures, unmanned aerial vehicles, stall prevention of civil aircraft, and obstacle avoidance among others.
Axion Inflation in F-theory
Creators: name: Grimm, Thomas W.
Publisher: name: arXiv
Year: 2014
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We study the dynamics of axion-like fields in F-theory and suggest that they can serve as inflatons in models of natural inflation. The axions arise from harmonic three-forms on the F-theory compactification space and parameterize a complex torus that varies over the geometric moduli space. In particular, this implies that the axion decay constants depend on the complex structure moduli that can be fixed by background fluxes. This might allow tuning them to be super-Planckian in a controlled way and allow for interesting single field inflationary models. We argue that this requires a localization of the three-forms near regions of strong string coupling, analogously to the reasoning that GUT physics requires the use of F-theory. These models can admit a tensor to scalar ratio r>0.1.
description: 9 pages, 1 figure; v2: added clarifying remarks and references
Additional file 1 of FABP7 is a potential biomarker to predict response to neoadjuvant chemotherapy for breast cancer
Creators: name: Xie, Qin
name: Xiao, Ying-Sheng
name: Jia, Shi-Cheng
name: Jie-Xuan Zheng
name: Du, Zhen-Chao
name: Chen, Yi-Chun
name: Mu-Tong Chen
name: Yuan-Ke Liang
name: Lin, Hao-Yu
name: Zeng, De
Publisher: name: figshare
Year: 2020
Subjects: subject: Biophysics
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Plant Biology
subject: Computational Biology

description: Additional file 1: Fig. S1. Flow chart of data preparation, processing, analysis, and validation. Fig. S2. The relationship between ESR1 or FABP7 mRNA level and chemoresistance. ESR1 expression in patients acquired by pCR and with residual tumor after receiving neoadjuvant treatment in GSE21997(A), GSE32646 (C) and GSE25055 (E). FABP7 expression in patients acquired by pCR and with residual tumor after receiving neoadjuvant treatment in GSE21997(B), GSE32646 (D) and GSE25055 (F). Figure S3. The FABP7 and ESR1 mRNA level in normal and cancer tissue. The mRNA expression of FABP7 and ESR1 in different cancer type. (B and C) Comparison of FABP7 mRNA expression in TCGA breast statistics; (D and E) Comparison of ESR1 mRNA expression in Curtis breast statistics (D) and TCGA breast statistics; (E). Box plots derived from gene expression data in ONCOMINE comparing expression of FABP7 and ESR1 in normal and BC tissue. The p-value was set up at 0.01 and fold change was defined as 2. Figure S4. The expression of FABP7 in different subtypes of breast cancer. (A) The expression of FABP7 in Basal-like and Not basal-like types. (B) The expression of FABP7 in several subtypes of breast cancer patients. Figure S5. The expression alteration of FABP7 in MDA-MB-231 breast cancer cells treated with doxorubicin. The western blot result of FABP7 expression in parental MDA-MB-231 breast cancer cells with or without doxorubicin. Figure S6. The RT-PCR assays reveal that the relative mRNA level of FABP7, ESR1 in overexpressed FABP7 MDA-MB-231-ADR and control group cells. Figure S7. Elevated FABP7 expression predicted better survival in breast cancer patients, especially in the ER(-), subgroups and BC patients received chemotherapy and neoadjuvant chemotherapy. (A–G) High mRNA level of FABP7 is associated with longer RFS in BC patients, who have received chemotherapy (A) and neoadjuvant chemotherapy (D), but not adjuvant chemotherapy (G). High mRNA level of FABP7 is associated with longer RFS in ER(-)BC patients, who have received chemotherapy (C) and adjuvant chemotherapy (F), but not in ER(+)BC patients. Figure S8. All protein expression level. Gray value measurement and statistical analysis of Western-blot in Figure 4 (A and B), Figure 5 (C and D).
Electrically Driven Insulator-Metal Transitions in Vanadium Dioxide for Neuromorphic Computing
Creators: name: Yu, Haoming
Publisher: name: Purdue University Graduate School
Year: 2023
Subjects: Functional materials
Electrical circuits and systems

description: The field of artificial intelligence (AI) envisions to create intelligent machines inspired by the human brain. Over the past two decades, the rapid development of artificial intelligence has enabled machines to learn and perform complicated variety of tasks and even outperforming humans in some aspects. Design of semiconductor device hardware for AI is an active area of research. Ideally, these materials and devices should display behaviors similar to the operation of neurons and synapses, such as learning and forgetting, summation of inputs, threshold firing, etc. Correlated oxide materials such as VO2 are a good candidate system due to the wide variety of physical phenomena they can possess. The metal to insulator transition of VO2 can be triggered by electrothermal effect, which is important for building artificial neurons. Additionally, it can retain several metastable states by well controlled doping, which is desirable for artificial synapses. Three studies based on VO2 are presented here. In the first study, the switching dynamics of in-series connected VO2 devices under triangular electric pulses is presented. Experimental data shows the temperature of one of the connected devices can affect the input voltage to trigger E-IMT of both connected VO2 device. Furthermore, this property is employed in building neuron models in SNN simulations to show case its application in neuromorphic networks. In the second work, selective area hydrogen doping of VO2 device by electrode patterning is shown. With this technique, both artificial neurons and synapses can be realized in a single chip. Finally, the effect of hydrogen doping on volatile electrically triggered insulator to metal transition of VO2 is discussed. Modulation of threshold voltages and stochasticity is demonstrated. These studies highlight the opportunities presented by phase transitions in oxides for emerging computing technologies.
A High-Tc Mechanism of Iron Pnictide Superconductivity due to Cooperation of Ferro-orbital and Antiferromagnetic Fluctuations
Creators: name: Yamada, Takemi
name: Ishizuka, Jun
name: Ōno, Yoshiaki
Publisher: name: arXiv
Year: 2014
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: The electronic states and superconductivity in iron pnictides are studied on the basis of the 16 band $d$-$p$ model which includes both the onsite Coulomb interaction between Fe $d$ electrons and the intersite one between Fe $d$ and pnictogen $p$ electrons. The model well accounts for experimentally observed two fluctuations: the $d$-$d$ interaction-enhanced antiferromagnetic (AFM) fluctuation and the $d$-$p$ interaction-enhanced ferro-orbital (FO) fluctuation responsible for the $C_{66}$ elastic softening. The AFM fluctuation induces the repulsive pairing interaction for $\bm{q}\sim \bm{Q}_{\rm AF}$ while the FO does the attractive one for $\bm{q}\sim \bm{0}$ resulting in the $s_{\pm}$-wave superconductivity where the two fluctuations cooperatively enhance the superconducting transition temperature $T_{c}$ without any competition by virtue of the $\bm{q}$-space segregation.
description: 4 pages, 4 figures
Endogenous Reference Price Auctions for a Diverse Set of Commodities: An Experimental Analysis
Publisher: name: University of Virginia
Year: 2017
Subjects: reference price auctions, mortgage backed securities, laboratory experiments

description: Endogenous Reference Price Auctions for a Diverse Set of Commodities: An Experimental Analysis

Olivier Armantier and Charles A. Holt

Abstract
This paper uses laboratory techniques to evaluate procedures for selling a heterogeneous set of commodities in auctions designed to create thick markets.  “Reference prices,” based on commodity characteristics and other available information, are used to normalize bids before they are ranked.  The complex, multi-dimensional nature of the commodity space creates a rich strategic environment that is well suited for testing with financially motivated human subjects.  When reference prices are based on noisy value estimates, the auction performance is substantially improved by using submitted bids to adjust reference prices before the auction is cleared.
Online repository, Adair, T et al. Assessing the policy utility of routine mortality statistics: a global classification of countries, Bulletin of the World Health Organization
Creators: name: ADAIR, TIMOTHY
name: Mikkelsen, Lene
name: Hooper, Jessica
name: Badr, Azza
name: Lopez, Alan D.
Publisher: name: University of Melbourne
Year: 2023
Subjects: classificationCode: 420308
subject: Health informatics and information systems
classificationCode: 440304
subject: Mortality
classificationCode: 490599
subject: Statistics not elsewhere classified
classificationCode: 420207
subject: Major global burdens of disease

description: Online repository for article Adair T, Mikkelsen L, Hooper J, Badr A, Lopez AD. Policy utility of routine mortality statistics: a global classification of countries. Bulletin of the World Health Organization.
Hyperhomocysteinemia as an early modifiable biomarker of age-related cognitive decline and risk of Alzheimer disease
Creators: name: Ferguson, Keelin
Publisher: name: No Publisher Supplied
Year: 2023

description: Statement of Problem: Studies have demonstrated associations between elevated plasma homocysteine and cognitive impairment, Alzheimer’s disease, and dementia. This study sought to explore the relationship between elevated plasma homocysteine, regional brain volumes, and cognitive function in older adults with no overt cognitive impairment and the potential of elevated homocysteine to serve as an early modifiable biomarker for age-related neurodegeneration and cognitive decline. Objective: We evaluated the relationship between plasma homocysteine, regional brain volumes, and cognitive function in older adults with no cognitive impairment (age 69-90 y; N=243, 129 women, 114 men).Methods: Blood samples were collected to determine concentration of plasma total homocysteine, RBC folate, serum vitamin B12 and serum creatinine. Cognitive function tests included assessment of global cognitive function, processing speed, verbal memory, and executive function. Regional brain volume scans were conducted using MRI imaging analyzed by Freesurfer. Associations between plasma homocysteine, cognitive function and regional brain volumes were assessed using multiple regression analysis with control for age, sex, education, RBC folate, vitamin B12 and serum creatinine.Results: Homocysteine was inversely correlated with 12 of 15 regional brain volumes (P<0.05) after adjusting for demographic and biochemical variables. Homocysteine was inversely correlated with 3 of the 12 cognitive function tests (P<0.05) after adjusting for demographic and biochemical variables. The three cognitive function tests that were significantly associated with homocysteine were tests of executive functions. Conclusions: Elevated homocysteine can serve as an early modifiable risk factor for impaired cognitive function and neurodegeneration in healthy adults without overt clinical cognitive impairment. Further research is needed to confirm if lowering homocysteine with B vitamin supplements will slow the progression of neurodegeneration and cognitive decline in older adults.
Monocrepidius dohrni Candeze 1878
Creators: name: Kotru, Akash
name: Chandran, Nithya
name: Dubey, Anil Kumar
name: Prosvirov, Alexander S.
Publisher: name: Zenodo
Year: 2025
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Elateridae
Monocrepidius
Monocrepidius dohrni

description: Monocrepidius dohrni Candèze, 1878
Monocrepidius dohrni Candèze, 1878b: lxxvii
Type depository. Unknown.
Type locality. “Himalaya”.
Distribution. India: Exact distribution not known. Elsewhere: China (Cate, 2007).
Literature. Candèze (1878b: lxxvii): original description.
description: Published as part of Kotru, Akash, Chandran, Nithya, Dubey, Anil Kumar & Prosvirov, Alexander S., 2025, A catalogue of Indian Agrypninae Candèze, 1857 (Coleoptera: Elateridae), pp. 1-66 in Zootaxa 5614 (1) on page 47, DOI: 10.11646/zootaxa.5614.1.1, http://zenodo.org/record/15217075
Monocrepidius fuscus Fleutiaux 1933
Creators: name: Kotru, Akash
name: Chandran, Nithya
name: Dubey, Anil Kumar
name: Prosvirov, Alexander S.
Publisher: name: Zenodo
Year: 2025
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Elateridae
Monocrepidius
Monocrepidius fuscus

description: Monocrepidius fuscus Fleutiaux, 1933
Monocrepidius fuscus Fleutiaux, 1933: 8.
Type depository. Unknown.
Type locality. Karnataka (Fraserpet).
Distribution. India: Karnataka (Fleutiaux, 1933).
Literature. Fleutiaux (1933: 8): original description, bionomics.
description: Published as part of Kotru, Akash, Chandran, Nithya, Dubey, Anil Kumar & Prosvirov, Alexander S., 2025, A catalogue of Indian Agrypninae Candèze, 1857 (Coleoptera: Elateridae), pp. 1-66 in Zootaxa 5614 (1) on pages 47-48, DOI: 10.11646/zootaxa.5614.1.1, http://zenodo.org/record/15217075
Additional file 1 of Illuminating the complexities of conflict with evolution: validation of the scales of evolutionary conflict measure (SECM)
Creators: name: Sbeglia, Gena C.
name: Nehm, Ross H.
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Medicine
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1: Table S1. Fit statistics, reliabilities, and dimensionality of the I-SEA, CANS, and Religiosity instruments. Table S2. Factor loadings and variance extracted for the SECM, I-SEA, CANS, and Religiosity instruments.
Strong lensing as a test for Conformal Weyl Gravity
Creators: name: Cutajar, Deandra
name: Adami, Kristian Zarb
Publisher: name: arXiv
Year: 2014
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: Conformal Weyl Gravity (CWG) predicts galactic rotation curves without invoking dark matter. This makes CWG an interesting candidate theory as an alternative to GR. This removal of the necessity of dark matter arises because the exact exterior solution in CWG for a static, spherically symmetric source provides a linear potential $γr$, which can explain the observed galactic rotation curves with a value for $γ$ given by $\sim + 10^{-26} \mathrm{m}^{-1}$. Previous work has also shown that CWG can explain lensing observations, but with $γ\sim - 10^{-26} \mathrm{m}^{-1}$ in order to ensure converging rays of light rather than diverging ones. Even though different expressions for the angle of deflection have been derived in CWG in order to remove this inconsistency, this paper shows that the $γ$ required to fit the lensing data is several orders of magnitude higher than that required to fit the galactic rotation curves.
description: 6 pages, 2 tables, 2 figures
Additional file 1 of Mixed logistic regression in genome-wide association studies
Creators: name: Milet, Jacqueline
name: Courtin, David
name: Garcia, André
name: Perdry, Hervé
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer

description: Additional file 1. Including details on the AMLE and Offset methods, commands used for the simulations with the coalescent model and supplementary figures.
Advancing Hyku: Open Source Institutional Repository Platform Development
Publisher: name: Duraspace
Year: 2019
Subjects: Samvera
Advancing Hyku
institutional repository
Arcadia

description: This poster was presented at Samvera Connect on October 23, 2019 at Washington University in St. Louis.

The University of Virginia is pleased to announce a two-year award in the amount of $1,000,000 from Arcadia—a charitable fund of philanthropists Lisbet Rausing and Peter Baldwin—in support of the “Advancing Hyku: Open Source Institutional Repository Platform Development” project. Through this project, the University of Virginia and its partner institutions—Ubiquity Press and the British Library—will support the growth of open access through institutional repositories. Working with the global open infrastructure community, the partners will introduce significant structural improvements and new features to the Samvera Community’s Hyku Institutional Repository platform.

Beginning October 2019, the project will make the open source community institutional repository product Hyku a more attractive dissemination option by:
1. integrating open-resource discovery tools (e.g. Unpaywall, Open Access Button) to automatically scale repository contents.
2. adding metrics to indicate usage of contents (e.g. citations, social media).
3. connecting and syncing with author identification and profile services (e.g. ORCID).
4. encouraging interaction with contents through in-browser display, visualization and annotation.
5. establishing pathways to long-term preservation services.
6. assessing requirements and jointly creating detailed, component-specific development plans, resulting in the collaborative development of new capabilities.

All code will be released open source, to be merged with the Hyku core codebase in accord with the Samvera Community’s practices.
Deriving model-based T$_e$-consistent chemical abundances in ionised gaseous nebulae
Creators: name: Pérez-Montero, Enrique
Publisher: name: arXiv
Year: 2014
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: The derivation of abundances in gaseous nebulae ionised by massive stars using optical collisionally excited emission lines is studied in this work comparing the direct or $T_e$ method with updated grids of photoionisation models covering a wide range of input conditions of O/H and N/O abundances and ionisation parameter. The abundances in a large sample of compiled objects with at least one auroral line are re-derived and later compared with the $χ^2$ weighted-mean abundances from the models. The agreement between the abundances using the two methods both for O/H and N/O is excellent with no additional assumptions about the geometry or physics governing the HII regions. Although very inaccurate model-based O/H are obtained when no auroral lines are considered, this can be overcome assuming empirical laws between O/H, log $U$, and N/O to constrain the considered models. In this way, for 12+log(O/H) $>$ 8.0, a precision better than 0.1dex consistent with the direct method is attained. For very low-$Z$, models give higher O/H values and a high dispersion, possibly owing to the contamination of the low-excitation emission-lines. However, in this regime, the auroral lines are usually well-detected. The use of this procedure, in a publicly available script, HII-CHI-mistry}, leads to the derivation of abundances in faint/high redshift objects consistent with the direct method based on CELs.
description: 14 pages, 9 figures. Accepted for publication in Monthly Notices of the Royal Astronomical Society. Some figures and text have been replaced to match published version
Additional file 1 of Simultaneous rupture on conjugate faults during the 2018 Anchorage, Alaska, intraslab earthquake (MW 7.1) inverted from strong-motion waveforms
Creators: name: Yujia Guo
name: Miyakoshi, Ken
name: Tsurugi, Masato
Publisher: name: figshare
Year: 2020
Subjects: subject: Geology
subject: FOS: Earth and related environmental sciences
subject: Geophysics

description: Additional file 1: Table S1. Focal Mechanism of Two Moderate-Sized Aftershocks. Table S2. Physical Parameters in the 1D Velocity Structure Models Used for the Waveform Inversions. Figure S1. Spatiotemporal distribution of the relocated aftershocks within the three days following the Anchorage mainshock (plotted points). The large star marks the epicenter of the mainshock. Figure S2. Relocated aftershocks within the three days following the Anchorage mainshock (plotted points). a Map view. The large star marks the epicenter of the mainshock. The dashed and dotted ellipses denote the southern and northern aftershock clusters, respectively. b Cross-sectional view of the aftershocks along the linear profile C–D. The bold line indicates the slab surface. Figure S3. Weight of the smoothing constraint and rupture velocity selected by the inversion (case B). a ABIC versus the weight of smoothing constraint. b Variance reduction versus the rupture velocity. The circles denote the values selected by the inversion. Figure S4. Velocity waveforms (0.1–0.4 Hz) during two moderate-sized aftershocks. The number to the right of each waveform denotes the peak amplitude in cm/s. Figure S5. Preliminary inversion trials for different fault widths of segment S1. a Map views of the final slips. The large yellow star denotes the epicenter. b Comparison between the observed and synthetic velocity waveforms (0.05–0.4 Hz). The number to the right of each waveform denotes the peak amplitude in cm/s. The map view shows the epicenter (star) and stations (triangles). The gray dashed lines show the waveform differences. Figure S6. Slip model of the Inskin earthquake (USGS 2018). The star denotes the rupture initiation point. The inside of the black rectangle denotes the rupture area. The two purple rectangles indicate the large slip areas. The rupture area and the large slip areas were determined using the criteria of Somerville et al. (1999).
Polarization dependence of double resonant Raman scattering band in bilayer graphene
Creators: name: Lee, Jae-Ung
name: Seck, Ngor Mbaye
name: Yoon, Duhee
name: Choi, Seon-Myeong
name: Son, Young-Woo
name: Cheong, Hyeonsik
Publisher: name: arXiv
Year: 2014
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: The polarization dependence of the double resonant Raman scattering (2D) band in bilayer graphene (BLG) is studied as a function of the excitation laser energy. It has been known that the complex shape of the 2D band of BLG can be decomposed into four Lorentzian peaks with different Raman frequency shifts attributable to four individual scattering paths in the energy-momentum space. From our polarization dependence study, however, we reveal that each of the four different peaks is actually doubly degenerate in its scattering channels, i.e., two different scattering paths with similar Raman frequency shifts for each peak. We find theoretically that one of these two paths, ignored for a long time, has a small contribution to their scattering intensities but are critical in understanding their polarization dependences. Because of this, the maximum-to-minimum intensity ratios of the four peaks show a strong dependence on the excitation energy, unlike the case of single-layer graphene (SLG). Our findings thus reveal another interesting aspect of electron-phonon interactions in graphitic systems.
description: 19 pages, 5 figures
Blood products inventory dashboard
Creators: name: Vasovic, Ljiljana V
name: Chen, Robert
Publisher: name: Zenodo
Year: 2023
Subjects: Blood bank
Inventory
Dashboard

description: Our blood bank has established maximum, minimum and critical thresholds for blood components based on historical utilization data. To facilitate close inventory monitoring, we designed and implemented a blood product inventory dashboard in Microsoft Excel. We are sharing an easily editable template for community use to be implemented upon local edits and validations.
Additional file 6 of Impact of prior cancer history on the survival of patients with larynx cancer
Creators: name: Kaiquan Zhu
name: Renyu Lin
name: Ziheng Zhang
name: Huanqi Chen
name: Xingwang Rao
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Science Policy

description: Additional file 6.
Economic consequences of consumer repair strategies for electrical household devices
Creators: name: Brusselaers, Jan
name: Bracquené, Ellen
name: Peeters, Jef R.
name: Dams, Yoko
Publisher: name: Technische Universität Berlin
Year: 2021
Subjects: subject: 500 Naturwissenschaften und Mathematik
subject: 600 Technik, Technologie
subject: 300 Sozialwissenschaften
subject: repair
subject: repairability
subject: product lifetime
subject: life cycle cost
subject: Monte Carlo Simulation

description: This paper investigates to what extent a consumer’s repair strategy impacts the annual costs of ownership of a washing machine and two types of vacuum cleaner. The annual cost of ownership is determined by calculating the annual life cycle cost (LCC) for the respective devices. The annual LCCs of the different scenarios allow a comparison of the different repair strategy options. A Monte Carlo simulation is run to introduce parameter variability. The device’s failure rate is estimated by a combination of datasets on the devices’ performance. Results demonstrate that the repair of the devices considered is a more favourable option over replacement. A consumer who aims for the lowest annual LCC should allow for a high number of repairs per device, without putting a maximum on the cost per repair. However, the consumer should become more cautious when a device approaches the end of its expected lifetime. Finally, the purchase of warranty can be interesting when the warranty covers a sufficiently long proportion of the device’s (expected) lifetime and when its cost does not exceed a threshold proportion of the initial purchase price.
Characterization and inversion theorems for a generalized Radon transform
Creators: name: Agaltsov, Alexey
Publisher: name: arXiv
Year: 2014
Subjects: subject: Functional Analysis (math.FA)
subject: FOS: Mathematics

description: In this paper the generalized Radon transform over level hypersurfaces of CES-functions of measures supported in positive orthant is studied. A characterization of the generalized Radon transform of nonnegative measures is found. Explicit inversion formula for the generalized Radon transform of absolutely continuous measures is obtained.
description: 17 pages, translation from Russian
EuTeachPaaS.- Toolkit for boosting the capacity of university units/departments in charge of quality assurance, learning and new course development.
Creators: name: Valls, Miguel Pérez
name: Labella, Irene Gea
name: Fernández, Piedad Ortiz
name: Qin, Yu
name: Solomon, Adrian
name: Morgado, Andreia
name: Bravo, César Bernal
name: Vietri, Davide
Publisher: name: Zenodo
Year: 2022
Subjects: Open Access
co-creation

description: This course overview provide an insight into the toolkit for boosting the capacity of university units/departments in charge of quality assurance, learning and new course development (IO4) developed within the framework of the EuTeachPaaS project. This IO presents a toolkit for boosting the capacity of university administrators to foster digital education delivery in universities. It offers a collection of resources, comprising four main pillars that can help build digital skills of university administration staff and strategies to incorporate the skills into their online education in order to boost their capacity in improving the quality and further promote their online education programs.
Supplemental Data Gene expression in the kidney of NFAT5-KO mice
Creators: name: Izumi, Yuichiro
Publisher: name: figshare
Year: 2023
Subjects: classificationCode: 320214
subject: Nephrology and urology

description: Supplemental Data for a manuscript "Characterization of gene expression in the kidney of renal tubular cell-specific NFAT5 knockout mice" .
Search for cool giant exoplanets around young and nearby stars - VLT/NaCo near-infrared phase-coronagraphic and differential imaging
Creators: name: Maire, A. -L.
name: Boccaletti, A.
name: Rameau, J.
name: Chauvin, G.
name: Lagrange, A. -M.
name: Bonnefoy, M.
name: Desidera, S.
name: Sylvestre, M.
name: Baudoz, P.
name: Galicher, R.
name: Mouillet, D.
Publisher: name: arXiv
Year: 2014
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Physical sciences

description: [Abridged] Context. Spectral differential imaging (SDI) is part of the observing strategy of current and future high-contrast imaging instruments. It aims to reduce the stellar speckles that prevent the detection of cool planets by using in/out methane-band images. It attenuates the signature of off-axis companions to the star, such as angular differential imaging (ADI). However, this attenuation depends on the spectral properties of the low-mass companions we are searching for. The implications of this particularity on estimating the detection limits have been poorly explored so far. Aims. We perform an imaging survey to search for cool (Teff<1000-1300 K) giant planets at separations as close as 5-10 AU. We also aim to assess the sensitivity limits in SDI data taking the photometric bias into account. This will lead to a better view of the SDI performance. Methods. We observed a selected sample of 16 stars (age < 200 Myr, d < 25 pc) with the phase-mask coronagraph, SDI, and ADI modes of VLT/NaCo. Results. We do not detect any companions. As for the sensitivity limits, we argue that the SDI residual noise cannot be converted into mass limits because it represents a differential flux, unlike the case of single-band images. This results in degeneracies for the mass limits, which may be removed with the use of single-band constraints. We instead employ a method of directly determining the mass limits. The survey is sensitive to cool giant planets beyond 10 AU for 65% and 30 AU for 100% of the sample. Conclusions. For close-in separations, the optimal regime for SDI corresponds to SDI flux ratios >2. According to the BT-Settl model, this translates into Teff<800 K. The methods described here can be applied to the data interpretation of SPHERE. We expect better performance with the dual-band imager IRDIS, thanks to more suitable filter characteristics and better image quality.
description: 19 pages, 16 figures, accepted for publication in A&A, version including language editing
Supplemental Material.pdf
Creators: name: Johnson, Nicole
Publisher: name: figshare
Year: 2023
Subjects: Gender psychology

description: Supplemental Material for manuscript entitled, “It is Hard to Think About” A Mixed-Method Exploration into the Application of the Theory of Compassion Collapse to the #MeToo Movement published in The Journal of Interpersonal Violence. 