cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
MOESM3 of Lignocellulosic saccharification by a newly isolated bacterium, Ruminiclostridium thermocellum M3 and cellular cellulase activities for high ratio of glucose to cellobiose
Creators: name: Sheng, Tao
name: Zhao, Lei
name: Gao, Ling-Fang
name: Wen-Zong Liu
name: Cui, Min-Hua
name: Ze-Chong Guo
name: Ma, Xiao-Dan
name: Shih-Hsin Ho
name: Wang, Ai-Jie
Publisher: name: Figshare
Year: 2016
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified

description: Additional file 3. The comparison of 16S rDNA sequences between R. thermocellum M3 and similar bacteria species.
Synchrony for weak coupling in the complexified Kuramoto model
Creators: name: Thümler, Moritz
name: Srinivas, Shesha G. M.
name: Schröder, Malte
name: Timme, Marc
Publisher: name: arXiv
Year: 2024
Subjects: subject: Adaptation and Self-Organizing Systems (nlin.AO)
subject: FOS: Physical sciences

description: We present the finite-size Kuramoto model analytically continued from real to complex variables and analyze its collective dynamics. For strong coupling, synchrony appears through locked states that constitute attractors, as for the real-variable system. However, synchrony persists in the form of \textit{complex locked states} for coupling strengths $K$ below the transition $K^{(\text{pl})}$ to classical \textit{phase locking}. Stable complex locked states indicate a locked sub-population of zero mean frequency in the real-variable model and their imaginary parts help identifying which units comprise that sub-population. We uncover a second transition at $K'
MOESM1 of Comparative genomic, transcriptomic and secretomic profiling of Penicillium oxalicum HP7-1 and its cellulase and xylanase hyper-producing mutant EU2106, and identification of two novel regulatory genes of cellulase and xylanase gene expression
Creators: name: Shuai Zhao
name: Yu-Si Yan
name: Qi-Peng He
name: Yang, Lin
name: Yin, Xin
name: Cheng-Xi Li
name: Mao, Li-Chun
name: Liao, Lu-Sheng
name: Jin-Qun Huang
name: Shang-Bo Xie
name: Qing-Dong Nong
name: Zhang, Zheng
name: Jing, Lei
name: Xiong, Ya-Ru
name: Duan, Cheng-Jie
name: Liu, Jun-Liang
name: Jia-Xun Feng
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Figure S1. Venn diagram showing unique and shared proteins in P. oxalicum strain HP7-1 annotated using the non-redundant (NR), UniProt, Kyoto Encyclopedia of Genes and Genomes (KEGG), and Gene Ontology (GO) databases.
Supplementary Material from Application of a new composite genetic marker semen-specific methylation-microhaplotype in the analysis of semen-vaginal fluid mixtures
Creators: name: Wen, Dan
name: Xing, Hao
name: Tang, Xuan
name: Wang, Yue
name: Jiang, Bowei
name: Li, Jienan
name: Liu, Ying
name: Zha, Lagabaiyila
Publisher: name: The Royal Society
Year: 2024
Subjects: classificationCode: 3105
subject: Genetics
subject: FOS: Biological sciences

description: Supplementary Table 2.docx
title: eComma (eCommentary Machine)
Creators: name: Center For Open Educational Resources And Lanaguage Learning
Publisher: name: The University of Texas at Austin
Year: 2012
Subjects: subject: Language Learning, Annotation

description: The eComma (eCommentary Machine) allowed its users to annotate texts at the word level and to share their annotations with others. The eComma annotation tool was created by Center for Open Educational Resources and Language Learning (COERLL) and based on a web application that was designed by a team of graduate students and faculty members of the Department of English at the University of Texas at Austin.
Stereotactic Percutaneous Electrochemotherapy as Primary Approach for Unresectable Large HCC at the Hepatic Hilum
Creators: name: Luerken, L.
name: Doppler, M.
name: Brunner, S. M.
name: Schlitt, H. J.
name: Uller, W.
Publisher: name: Universität Regensburg
Year: 2021
Subjects: subject: MICROWAVE ABLATION; HEPATOCELLULAR-CARCINOMA; TUMORS; Percutaneous Electrochemotherapy; Interventional Oncology; Percutaneous Ablation; Non-thermal Ablation; Stereotactic Navigation; HCC
subject: 610 Medizin

description: Electrochemotherapy (ECT) is a novel non-thermal ablative technique that combines chemotherapy and the application of electric pulses for reversible cell membrane electroporation. This method was recently performed in the treatment of deep-seated liver tumors during open surgery but experience about percutaneous ECT is rare and further developments like combination of percutaneous ECT with stereotactic navigated devices may be very promising. We report on a case of a 4.7 x 4.5 x 3.5 cm unresectable HCC at the hepatic hilum adjacent to the major vessels and the bile duct that was successfully treated using percutaneous ECT in combination with stereotactic navigation. Follow-up imaging 6 weeks and 6 months after ECT showed complete response.
Chromatophotina cofan Rivera, n. sp.
Creators: name: Rivera, Julio
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Mantodea
Mantidae
Chromatophotina
Chromatophotina cofan

description: Chromatophotina cofan Rivera n. sp.
(Figures 1 D, 4A–C)
Type material. Holotype female: Ecuador: Sucumbios, Coca/Lago Agrio, San Pedro de los Cofanes, 415m, 0º08’S 77º52’W, 23/23.IX. 1997 (C, Amégdégnato & S. Poulain leg.). The specimen was collected in a young secondary forest. Deposited at MNHN.
Description. Body green with yellow blotches on abdominal tergites; pronotum with white longitudinal stripe on each side. Measurements (in mm): body length, 37.0; head width: 5.3; pronotum, 13.0; fore coxa, 8.0; fore femur, 9.5; fore tibia, 5.5; mesothoracic wing: length 15.5, width 5.5; metathoracic wing, 12.0.
Head pentagonal in shape (Figure 4 A), juxtaocular tubercles weakly developed, as elevated as the vertex, forming a more or less continuous outline with the vertex; frontal shield transversal, approximately 6 times as wide as long. Antenna filiform, slightly over 10 mm long, yellowish in their basal third, progressively turning darker towards the tip.
Thorax. Pronotum slender (Figure 4 B); lateral edges almost smooth. Coxae of fore legs (Fig. 4 C) with margins exhibiting small denticles, other surfaces generally smooth. Spination formula: F=16IS/5ES/3DS and T=18-17IS/19ES. Mesothoracic wings opaque, green except for the costal area which is white and covered with white, dusty matter. Metathoracic wings short and squarish; costal area greenish-white; discal and anal areas bright yellow, opaque.
Abdomen. Supra-anal plate trapezoidal in shape, convex distally. Cerci greenish brown dorsally but each segment mostly dark brown ventromedially.
Male unknown.
Etymology. A noun in apposition, the specific epithet refers to the Cofán, indigenous people inhabiting northern Ecuador in the same general areas where the type specimen was obtained. As with many other indigenous peoples from the Amazon, the Cofán are in a constant struggle to preserve their territories and communities as these have been severely reduced within the last decades. The gender is female.
description: Published as part of Rivera, Julio, 2010, Chromatophotina, a remarkable new genus of praying mantid from the Neotropical Region and its two new species (Mantodea: Mantidae, Photinainae), pp. 22-32 in Zootaxa 2415 on pages 28-29, DOI: 10.5281/zenodo.294122
Pagurapseudidae
Creators: name: Santos, Kátia Christol Dos
name: Pires-Vanin, Ana Maria Setubal
Publisher: name: Zenodo
Year: 2006
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Tanaidacea
Pagurapseudidae

description: Key to the Brazilian genera of Pagurapseudidae
1 Body asymmetrical; pereopod 1, much longer and different than the following pereopods, with exopodite; pereopods 2–6 with suckers-like structures on merus, carpus and propodus ................................................................................................. Pagurapseudes
- Body symmetrical; pereopod 1, relatively equal and similar to following pereopods, without exopodite; pereopods 2–6 with setae (spiniform or not) on merus, carpus and propodus........................................................................................................................ 2
2 Females and males with five pairs of biramous pleopods.......... Parapagurapseudopsis
- Females without pleopods; males with two pairs of uniramous pleopods (on the last pleonites) ................................................................................................... Indoapseudes
description: Published as part of Santos, Kátia Christol Dos & Pires-Vanin, Ana Maria Setubal, 2006, Redescription of Parapagurapseudopsis carinatus (Tanaidacea: Apseudomorpha) and remarks about the male form, pp. 39-48 in Zootaxa 1363 on page 40, DOI: 10.5281/zenodo.174727
Parapagurapseudopsis Brum 1973
Creators: name: Santos, Kátia Christol Dos
name: Pires-Vanin, Ana Maria Setubal
Publisher: name: Zenodo
Year: 2006
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Tanaidacea
Pagurapseudidae
Parapagurapseudopsis

description: Parapagurapseudopsis Brum, 1973
Type-species. Parapagurapseudopsis carinatus Brum, 1973
New diagnosis. Body symmetrical, with dorsolongitudinal mesial carina on pereon and pleon. Antenna with squama (reduced in size). Cheliped with exopodite. Pereopod 1 without exopodite. Pereopods 1–6 thin, relatively similar, with merus shorter than the carpus or propodus. Pleopods biramous, in five pairs, present in males and females.
Remarks. The genus Parapagurapseudopsis is very similar to Indoapseudes. The main feature by which the two genera can be differentiate consists in the presence of five pairs of biramous pleopods in Parapagurapseudopsis, as results from the above key.
The genus Pagurapseudes, belonging to another subfamily within the Pagurapseudidae, Pagurapseudinae (Guţu, 1981), is characterized by the absence of antenna squama, by the configuration of pereopod 1 (much longer than other pereopods) and the presence of exopodite, and by the presence of suckers-like structures on the merus, carpus and propodus.
description: Published as part of Santos, Kátia Christol Dos & Pires-Vanin, Ana Maria Setubal, 2006, Redescription of Parapagurapseudopsis carinatus (Tanaidacea: Apseudomorpha) and remarks about the male form, pp. 39-48 in Zootaxa 1363 on pages 40-41, DOI: 10.5281/zenodo.174727
Implementation, relevance, and virtual adaptation of neuro-oncological tumor boards during the COVID-19 pandemic: a nationwide provider survey
Creators: name: Schäfer, Niklas
name: Bumes, Elisabeth
name: Eberle, Fabian
name: Fox, Viola
name: Gessler, Florian
name: Giordano, Frank A.
name: Konczalla, Juergen
name: Onken, Julia
name: Ottenhausen, Malte
name: Scherer, Moritz
name: Schneider, Matthias
name: Vatter, Hartmut
name: Herrlinger, Ulrich
name: Schuss, Patrick
Publisher: name: Universität Regensburg
Year: 2021
Subjects: subject: MULTIDISCIPLINARY CANCER CONFERENCES; HEALTH-CARE; BARRIERS; VOLUME; Neuro-oncology; Tumor board; Virtualization; COVID-19
subject: 610 Medizin

description: Purpose
Neuro-oncology tumor boards (NTBs) hold an established function in cancer care as multidisciplinary tumor boards. However, NTBs predominantly exist at academic and/or specialized centers. In addition to increasing centralization throughout the healthcare system, changes due to the COVID-19 pandemic have arguably resulted in advantages by conducting clinical meetings virtually. We therefore asked about the experience and acceptance of (virtualized) NTBs and their potential benefits.

Methods
A survey questionnaire was developed and distributed via a web-based platform. Specialized neuro-oncological centers in Germany were identified based on the number of brain tumor cases treated in the respective institution per year. Only one representative per center was invited to participate in the survey. Questions targeted the structure/organization of NTBs as well as changes due to the COVID-19 pandemic.

Results
A total of 65/97 institutions participated in the survey (response rate 67%). In the context of the COVID-19 pandemic, regular conventions of NTBs were maintained by the respective centers and multi-specialty participation remained high. NTBs were considered valuable by respondents in achieving the most optimal therapy for the affected patient and in maintaining/encouraging interdisciplinary debate/exchange. The settings of NTBs have been adapted during the pandemic with the increased use of virtual technology. Virtual NTBs were found to be beneficial, yet administrative support is lacking in some places.

Conclusions
Virtual implementation of NTBs was feasible and accepted in the centers surveyed. Therefore, successful implementation offers new avenues and may be pursued for networking between centers, thereby increasing coverage of neuro-oncology care.
Assessing impacts of COVID-19 and their responses among smallholder farmers in Brazil, Madagascar and Tanzania
Creators: name: Löhr, Katharina
name: Mugabe, Paschal
name: Turetta, Ana
name: Steinke, Jonathan
name: Lozano, Camilo
name: Bonatti, Michelle
name: Eufemia, Luca
name: Ito, Larissa Hery
name: Konzack, Alexandra
name: Kroll, Stefan
name: Mgeni, Charles Peter
name: Andrasana, Dina Ramanank’
name: Tadesse, Sophia
name: Yazdanpanah, Masoud
name: Sieber, Stefan
Publisher: name: Humboldt-Universität zu Berlin
Year: 2022
Subjects: subject: COVID-19
subject: coping strategies
subject: preventive measures
subject: agriculture
subject: smallholders
subject: government policies
subject: 630 Landwirtschaft und verwandte Bereiche

description: This publication is with permission of the rights owner (Sage) freely accessible.
description: This study investigates the impacts of the first wave of the COVID-19 pandemic on smallholder farmers and their coping strategies in three contrasting Low- and Middle-Income Countries. The case studies include Brazil (South region), Madagascar (Atsimo Atsinanana region), and Tanzania (Morogoro/Eastern Tanzania). These countries were chosen because i) the economies are strongly influenced by the agricultural sector; ii) their national food security is strongly affected by smallholder production, and, iii) they represent a set of contrasting government responses to COVID-19 including the denial of the pandemic. Data were collected through semi-structured household interviews in all three countries in rural areas. COVID-19 induced effects were found in all three countries, including in Brazil and Tanzania where both national governments initially neglected the existence of COVID-19 and introduced few containment measures only. Here, mobility and trade restrictions of other countries impact also on agricultural trade and production in countries in which governments took less action to COVID-19 and also people remained home and practiced social distancing even if no official government policy was issued. The findings in all three countries suggest that the COVID-19 crisis had negatively affected smallholders’ agricultural production, leading to a vicious cycle of low production, low incomes, and higher food insecurity. Results of this study raise the thorny issue of how best to balance containment of pandemic and future shocks against the well-being of the vulnerable rural population in lower- and middle-income countries; especially considering also the degree of global interconnected and the potential of polices to effect people beyond the national scale.
title: Navigating Ideational Dynamics: Actor-Policy Interactions in the Implementation of Indonesia's Higher Education Reform
Creators: name: Aprimadya, Muhammad Hali
Publisher: name: The Australian National University
Year: 2025

description: This thesis explores the diversity of actors' ideas, beliefs, and traditions in influencing and shaping their implementation of public policies. Drawing on the experience of higher education reform in Indonesia between 1999 and 2019, this thesis illuminates the intricate nature of actor-policy interactions by asking: how do actors' held beliefs and traditions shape their responses to 'new' ideas propagated by policies? And what do these interpretations and actions mean for policy implementation? This thesis uses an interpretive approach to explore academics' interpretations of a series of regulatory changes intended to shape their behaviour. This study demonstrates that the implementation of research-related policies in Indonesian higher education constitutes complex actor-policy ideational interactions that might not always be goal-oriented endeavours but also expressive acts. Central to these interactions are dilemmas that might arise from individual academics' ideational and institutional contexts. Facilitated by their 'situated' agency, Indonesian academics' interpretations and actions in response to dilemmas may constitute diverse acts that display a degree of discord with policy intents. This thesis contends that these incongruities depict academics' improvisations to overcome institutional conflicts rather than mere acts of negligence. Through decentred analysis, the thesis illuminates how policy implementation is an art and craft instead of a mere technocratic and structured effort. By combining the cultural approach and interpretivism, it also provides an alternative framework and methodological approach to study policy implementation. Finally, this thesis contributes to understanding the governance complexities of Indonesian higher education as one of the region's most dynamic higher education sectors.
Additional file 3: Table S3. of Serum metabolic biomarkers distinguish metabolically healthy peripherally obese from unhealthy centrally obese individuals
Creators: name: Gao, Xiang
name: Weidong Zhang
name: Yongbo Wang
name: Pedram, Pardis
name: Cahill, Farrell
name: Guangju Zhai
name: Randell, Edward
name: Gulliver, Wayne
name: Sun, Guang
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Physiology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Inorganic Chemistry
subject: Computational Biology

description: Dietary amino acids intakes of the study participants in the validation stage. (DOC 51 kb)
Additional file 1: Table S1. of Serum metabolic biomarkers distinguish metabolically healthy peripherally obese from unhealthy centrally obese individuals
Creators: name: Gao, Xiang
name: Weidong Zhang
name: Yongbo Wang
name: Pedram, Pardis
name: Cahill, Farrell
name: Guangju Zhai
name: Randell, Edward
name: Gulliver, Wayne
name: Sun, Guang
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Physiology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Inorganic Chemistry
subject: 60506 Virology
subject: Computational Biology

description: List of metabolite concentrations determined using the Biocrates AbsoluteIDQ kit. (DOC 42 kb)
A 'Glorificação dos Santos Franciscanos' do Convento de Santo Antônio da Paraíba: algumas questões sobre pintura, alegoria barroca e produção artística no período colonial
Creators: name: S. Oliveira, Carla Mary
Publisher: name: figshare
Year: 2024
Subjects: classificationCode: 430317
subject: Latin and South American history
classificationCode: 360102
subject: Art history

description: Paper about Franciscan Baroque in Paraíba, Brazilian Northeast coast.
Additional file 2: Table S2. of Serum metabolic biomarkers distinguish metabolically healthy peripherally obese from unhealthy centrally obese individuals
Creators: name: Gao, Xiang
name: Weidong Zhang
name: Yongbo Wang
name: Pedram, Pardis
name: Cahill, Farrell
name: Guangju Zhai
name: Randell, Edward
name: Gulliver, Wayne
name: Sun, Guang
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Physiology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Inorganic Chemistry
subject: Computational Biology

description: Dietary amino acids intakes of the study participants in the discovery stage. (DOC 46 kb)
Additional file 1: of Improving alignment accuracy on homopolymer regions for semiconductor-based sequencing technologies
Creators: name: Weixing Feng
name: Zhao, Sen
name: Dingkai Xue
name: Fengfei Song
name: Ziwei Li
name: Duojiao Chen
name: He, Bo
name: Yangyang Hao
name: Yadong Wang
name: Yunlong Liu
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Supplementary results. This file contains all supplementary results that are not covered in the manuscript, including 5 figures and 1 table on Ion Proton data. Figure S1. is about profile of retrieved homopolymers according to (a) nucleotide type and (b) position in the sequencing reads. Figure S2. is about prior possibilities of the detected voltages when nucleotide type is A and position in the sequencing reads belongs to Z1. Figure S3. is about other factors in identification of homopolymer length as (a) nucleotide type when homopolymer length is 4 and position in the sequencing reads belongs to Z1 and (b) position in the sequencing reads when homopolymer length is 4 and nucleotide type is A. Figure S4. is about identification result of homopolymer lengths when nucleotide type is A and position in the sequencing read belongs to Z1. The result is presented as (a) frequency of identification errors and (b) distribution of identification result. Figure S5. is about comparison of identification results among different identification methods according to (a) all methods and (b) two methods of only using reference information and the proposed method. Table S1. is about identification errors of homopolymer length with different methods. (PDF 396 kb)
PRIVATEER Deliverable D2.1: 6G threat landscape and gap  analysis
Creators: name: Fabrizio Scaglione
name: Cristian Petrollini
name: Francesco Manti
Publisher: name: Zenodo
Year: 2024
Subjects: 6G
threat landscape
gap analysis

description: This deliverable represents the outcome of a first analysis to identify the main foreseeable Security and Privacy threats related to the envisioned 6G Network and candidate 6G enabling technologies, as current studies and researches forecast to be fully/partially operational by 2030.
PRIVATEER Deliverable D2.1: 6G threat landscape and gap analysis
Creators: name: Scaglione, Fabrizio
name: Petrollini, Cristian
name: Manti, Francesco
Publisher: name: Zenodo
Year: 2023
Subjects: 6G
threat landscape
gap analysis

description: This deliverable represents the outcome of a first analysis to identify the main foreseeable Security and Privacy threats related to the envisioned 6G Network and candidate 6G enabling technologies, as current studies and researches forecast to be fully/partially operational by 2030.
PRIVATEER Deliverable D2.1: 6G threat landscape and gap  analysis
Creators: name: Fabrizio Scaglione
name: Cristian Petrollini
name: Francesco Manti
Publisher: name: Zenodo
Year: 2023
Subjects: 6G
threat landscape
gap analysis

description: This deliverable represents the outcome of a first analysis to identify the main foreseeable Security and Privacy threats related to the envisioned 6G Network and candidate 6G enabling technologies, as current studies and researches forecast to be fully/partially operational by 2030.
Evaluation of comprehensiveness and reliability of electronic health records concerning resuscitation efforts within academic intensive care units: a retrospective chart analysis
Creators: name: Dittmar, Michael
name: Zimmermann, Sabrina
name: Creutzenberg, Marcus
name: Bele, Sylvia
name: Bitzinger, Diane
name: Lunz, Dirk
name: Graf, Bernhard M.
name: Kieninger, Martin
Publisher: name: Universität Regensburg
Year: 2021
Subjects: subject: CARDIAC-ARREST; DOCUMENTATION; QUALITY; EVENTS; SYSTEM; COUNCIL; Quality management; Cardiopulmonary resuscitation; Intensive care unit; Medical documentation; Patient data management systems
subject: 610 Medizin

description: Background According to the literature, the validity and reliability of medical documentation concerning episodes of cardiopulmonary resuscitation (CPR) is suboptimal. However, little is known about documentation quality of CPR efforts during intensive care unit (ICU) stays in electronic patient data management systems (PDMS). This study analyses the reliability of CPR-related medical documentation within the ICU PDMS. Methods In a retrospective chart analysis, PDMS records of three ICUs of a single university hospital were searched over 5 y for CPR check marks. Respective datasets were analyzed concerning data completeness and data consistency by comparing the content of three documentation forms (physicians' log, nurses' log, and CPR incident form), as well as physiological and therapeutic information of individual cases, for missing data and plausibility of CPR starting time and duration. To compare data reliability and completeness, a quantitative measure, the Consentaneity Index (CI), is proposed. Results One hundred sixty-five datasets were included into the study. In 9% (n = 15) of cases, there was neither information on the time points of CPR initiation nor on CPR duration available in any data source. Data on CPR starting time and duration were available from at least two data sources in individual cases in 54% (n = 90) and 45% (n = 74), respectively. In these cases, the specifications of CPR starting time did differ by a median +/- interquartile range of 10.0 +/- 18.5 min, CPR duration by 5.0 +/- 17.3 min. The CI as a marker of data reliability revealed a low consistency of CPR documentation in most cases, with more favorable results, if the time interval between the CPR episode and the time of documentation was short. Conclusions This study reveals relevant proportions of missing and inconsistent data in electronic CPR documentation in the ICU setting. The CI is suggested as a tool for documentation quality analysis and monitoring of improvements.
Additional file 2: Table S2. of Gender differences in white matter pathology and mitochondrial dysfunction in Alzheimer’s disease with cerebrovascular disease
Creators: name: Gallart-Palau, Xavier
name: Lee, Benjamin
name: Adav, Sunil
name: Jingru Qian
name: Serra, Aida
name: Park, Jung
name: Lai, Mitchell
name: Chen, Christopher
name: Kalaria, Raj
name: Siu Sze
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Tabular data of differential regulated mitochondrial proteome in BA21 of AD + CVD subjects compared to age-matched controls. 1. p-value of women/control groups. 2. p-value of men/control groups. (DOCX 16 kb)
Genetic variants in bone morphogenetic proteins signaling pathway might be involved in palatal rugae phenotype in humans
Creators: name: Kirschneck, Christian
name: Silva-Sousa, Alice Correa
name: Maranon-Vasquez, Guido Artemio
name: Stuani, Maria Bernadete Sasso
name: Proff, Peter
name: Andrades, Kesly Mary Ribeiro
name: Baratto-Filho, Flares
name: Matsumoto, Mirian Aiko Nakane
name: Paddenberg, Eva
name: Küchler, Erika Calvano
Publisher: name: Universität Regensburg
Year: 2021
Subjects: subject: HEDGEHOG; GROWTH;
subject: 610 Medizin

description: This study investigated, if genetic variants in BMP2, BMP4 and SMAD6 are associated with variations in the palatal rugae pattern in humans. Dental casts and genomic DNA from 75 patients were evaluated. Each patient was classified as follows: total amount of rugae; bilateral symmetry in the amount, length and shape of the palatal rugae; presence of secondary or fragmentary palatal rugae; presence of unifications; predominant shape; and predominant direction of the palatal rugae. The genetic variants in BMP2 (rs1005464 and rs235768), BMP4 (rs17563) and SMAD6 (rs2119261 and rs3934908) were genotyped. Genotype distribution was compared between palatal rugae patterns using the chi-square test (alpha=0.05). The allele A was associated with the presence of secondary or fragmentary rugae for rs1005464 (OR=2.5, 95%CI 1.1-6.3; p=0.014). Secondary or fragmentary rugae were associated with the G allele in rs17563 (OR=2.1, 95%CI 1.1-3.9; p=0.017). rs17563 was also associated with rugae unification (p=0.017 in the additive model). The predominant shape (wavy) was associated with rs2119261 (p=0.023 in the additive model). The left-right symmetry of the length of primary rugae was associated with rs3934908 in the recessive model (OR=3.6, 95%CI 1.2-11.7; p=0.025). In conclusion, genetic variants in the BMP pathway impacted on palatal rugae pattern.
Additional file 3: Figure S1. of Gender differences in white matter pathology and mitochondrial dysfunction in Alzheimer’s disease with cerebrovascular disease
Creators: name: Gallart-Palau, Xavier
name: Lee, Benjamin
name: Adav, Sunil
name: Jingru Qian
name: Serra, Aida
name: Park, Jung
name: Lai, Mitchell
name: Chen, Christopher
name: Kalaria, Raj
name: Siu Sze
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: 111714 Mental Health
subject: FOS: Health sciences

description: A. Percentage coefficient of variation of calculated iTRAQ ratios. Less than 5 % of protein ratios in dementia groups show a %CV higher than 50 % (>1.5 ratio). B. Plot of the post-mortem delay confidence intervals showing no significant differences between the experimental groups which indicates no effect of this variable on the identified proteome changes. C. Number of 99 % of confidence identified peptides included in our study based on the obtained G-test p-values after FDR correction (p
MultiTASC++: A Continuously Adaptive Scheduler for Edge-Based Multi-Device Cascade Inference
Creators: name: Nikolaidis, Sokratis
name: Venieris, Stylianos I.
name: Venieris, Iakovos S.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Machine Learning (cs.LG)
subject: Distributed, Parallel, and Cluster Computing (cs.DC)
subject: FOS: Computer and information sciences

description: Cascade systems, consisting of a lightweight model processing all samples and a heavier, high-accuracy model refining challenging samples, have become a widely-adopted distributed inference approach to achieving high accuracy and maintaining a low computational burden for mobile and IoT devices. As intelligent indoor environments, like smart homes, continue to expand, a new scenario emerges, the multi-device cascade. In this setting, multiple diverse devices simultaneously utilize a shared heavy model hosted on a server, often situated within or close to the consumer environment. This work introduces MultiTASC++, a continuously adaptive multi-tenancy-aware scheduler that dynamically controls the forwarding decision functions of devices to optimize system throughput while maintaining high accuracy and low latency. Through extensive experimentation in diverse device environments and with varying server-side models, we demonstrate the scheduler's efficacy in consistently maintaining a targeted satisfaction rate while providing the highest available accuracy across different device tiers and workloads of up to 100 devices. This demonstrates its scalability and efficiency in addressing the unique challenges of collaborative DNN inference in dynamic and diverse IoT environments.
Additional file 7: Figure S2. of Gender differences in white matter pathology and mitochondrial dysfunction in Alzheimerâ  s disease with cerebrovascular disease
Creators: name: Gallart-Palau, Xavier
name: Lee, Benjamin
name: Adav, Sunil
name: Jingru Qian
name: Serra, Aida
name: Park, Jung
name: Lai, Mitchell
name: Chen, Christopher
name: Kalaria, Raj
name: Siu Sze
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Structural alignment of human and bovine MBP sequences. EMBOSS_001 corresponds to human MBP and MBP_Bovine corresponds to bovine MBP. (PDF 231Â kb)
Periodontitis and pulmonary function: a Mendelian randomization study
Creators: name: Baumeister, Sebastian-Edgar
name: Nolde, Michael
name: Holtfreter, Birte
name: Baurecht, Hansjörg
name: Gläser, Sven
name: Kocher, Thomas
name: Ehmke, Benjamin
Publisher: name: Universität Regensburg
Year: 2021
Subjects: subject: HEALTH; Periodontitis; Lung function; Mendelian randomization
subject: 610 Medizin

description: Objectives Observational research suggests that periodontitis affects pulmonary function; however, observational studies are subject to confounding and reverse causation, making causal inference and the direction of these associations difficult. We used Mendelian randomization (MR) to assess the potential causal association between genetic liability to periodontitis and pulmonary function. Materials and methods We used six single-nucleotide polymorphisms (SNPs) associated with periodontitis (P < 5 x 10(-6)) from a genome-wide association study (GWAS) of 17,353 European descent periodontitis cases and 28,210 controls from the GeneLifestyle Interactions in Dental Endpoints consortium and the UK Biobank, and related these to SNPs from a lung function GWAS including 79,055 study participants of the SpiroMeta Consortium. Results MR analysis suggested no effect of periodontitis on the ratio of forced expiratory volume in one second to lower forced vital capacity (standard deviation increment in outcome per doubling of the odds of the exposure (95% confidence interval) = - 0.004 (- 0.028; 0.020)). Replication analysis using genetic instruments from two different GWAS and sensitivity analyses to address potential pleiotropy led to no substantial changes in estimates. Conclusions Collectively, these findings do not support a relationship between genetic liability for periodontitis and pulmonary function.
Additional file 1: Table S1. of Gender differences in white matter pathology and mitochondrial dysfunction in Alzheimer’s disease with cerebrovascular disease
Creators: name: Gallart-Palau, Xavier
name: Lee, Benjamin
name: Adav, Sunil
name: Jingru Qian
name: Serra, Aida
name: Park, Jung
name: Lai, Mitchell
name: Chen, Christopher
name: Kalaria, Raj
name: Siu Sze
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Tabular data of differential regulated white matter proteome in BA21 of AD + CVD subjects compared to age-matched controls. 1. p-value of women/control groups. 2. p-value of men/control groups. (DOC 33 kb)
Eubezverkhovia Gorochov et Izerskyy 2020, nom. nov.
Creators: name: Gorochov, A. V.
name: Izerskyy, V. V.
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Gryllidae
Eubezverkhovia

description: Genus Eubezverkhovia Gorochov et Izerskyy, nom. nov.
Bezverkhovia Gorochov, 2018: 81, junior homonym of Bezverkhovia Zolotuhin et Sinyaev, 2009 (Lepidoptera: Lasiocampidae).
Type species: Bezverkhovia lydia Gorochov, 2018: 82.
Etymology. The new replacement name consists of the homonymic cricket generic name Bezverkhovia and the Latinised Greek prefix eu - (true, good).
description: Published as part of Gorochov, A. V. & Izerskyy, V. V., 2020, A new replacement name for Bezverkhovia Gorochov, 2018 (Orthoptera: Gryllidae: Podoscirtinae), pp. 58-59 in Zoosystematica Rossica (Zoosyst. Rossica) (Zoosyst. Rossica) 29 (1) on page 29, DOI: 10.31610/zsr/2020.29.1.58, http://zenodo.org/record/10124232
Suspicious breast lesions incidentally detected on chest computer tomography with histopathological correlation
Creators: name: Georgieva, Martina
name: Rennert, Janine
name: Brochhausen, Christoph
name: Stroszczynski, Christian
name: Jung, Ernst‐Michael
Publisher: name: Universität Regensburg
Year: 2021
Subjects: subject: COLOR-DOPPLER; CT; ELASTOGRAPHY; STRAIN; BENIGN; MASSES; chest computed tomography; incidental breast lesions; invasive carcinoma of no special type (NST)
subject: 610 Medizin

description: Objective: To evaluate incidental breast lesions on chest computed tomography with histopathological correlation. It is important for general radiologist to characterize a breast lesion as benign, indetermined, or sufficiently suspicious to warrant further work-up. Methods: A total of 35.000 chest CT examinations were performed between January 2016 and December 2020. 27 patients (mean age 70 years, age range 48-87 years) with incidental breast lesions were identified in this retrospective study. Two radiologists scored incidental breast lesions independently regarding their morphology, and the results were compared to histopathology which was obtained by an ultrasound-guided core needle biopsy or a surgical excision. Results: Out of 35.000 chest CT examinations, a total of 31 incidental breast lesions in 27 patients were detected. Among the 31 lesions, 23 were malignant and 8 benign. The malignant lesions included 17 carcinomas and 6 metastases (4 lymphomas and 2 melanomas). The benign lesions contained 2 hematomas, 4 fat necrosis, and 2 fibrosis lumps. Conclusion: Chest computed tomography as a standard imaging technique is helpful for evaluation of suspicious breast lesions. This may ultimately influence patient management and lead to further imaging.
Additional file 1: Table S1. of A novel pyruvate kinase and its application in lactic acid production under oxygen deprivation in Corynebacterium glutamicum
Creators: name: Chai, Xin
name: Xiuling Shang
name: Zhang, Yu
name: Shuwen Liu
name: Liang, Yong
name: Zhang, Yun
name: Tingyi Wen
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Computational Biology

description: Growth kinetics of the pyk mutants on glucose under aerobic conditions. Table S2. Kinetic parameters of the Pyk2 for substrates. Table S3. Strains and plasmids used in this study. Table S4. Primers used in this study. Figure S1. The map positions of the pyk genes and the multiple alignment of the Pyk sequences. Figure S2. Kinetic parameters of Pyk2 with respect to PEP at a concentration of 5Â mM G6P (a) or AMP (b). Figure S3. Conservation of pyk2 gene and adjacent genes in species of the Corynebacterium and other species. (DOCX 651 kb)
Additional file 1: of Embryonic stem cell preconditioned microenvironment suppresses tumorigenic properties in breast cancer
Creators: name: Ningning He
name: Guowei Feng
name: Li, Yang
name: Xu, Yang
name: Xiaoyan Xie
name: Wang, Hui
name: Yuebing Wang
name: Lailiang Ou
name: Xuetao Pei
name: Liu, Na
name: Zongjin Li
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Biochemistry
subject: Space Science
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Plant Biology

description: Supplementary information contains Table S1 presenting primer sequences used for real-time PCR, Figure S1 showing mES cell characterization and reporter gene cells used in the experiment, Figure S2 showing decreased proliferation of 4T1 cells by direct cellâ  cell contact of ES cells, Figure S3 showing ES-CM inhibited Stat3 signaling pathway in 4T1 cells (related to FigureÂ 3), and Figure S4 showing ES-CM inhibit tumor growth in vivo (related to FigureÂ 5). (DOCX 4638 kb)
Eubezverkhovia lydia Gorochov & Izerskyy 2020, comb. nov.
Creators: name: Gorochov, A. V.
name: Izerskyy, V. V.
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Gryllidae
Eubezverkhovia
Eubezverkhovia lydia

description: Eubezverkhovia lydia (Gorochov, 2018), comb. nov.
Bezverkhovia lydia Gorochov, 2018: 82.
description: Published as part of Gorochov, A. V. & Izerskyy, V. V., 2020, A new replacement name for Bezverkhovia Gorochov, 2018 (Orthoptera: Gryllidae: Podoscirtinae), pp. 58-59 in Zoosystematica Rossica (Zoosyst. Rossica) (Zoosyst. Rossica) 29 (1) on page 29, DOI: 10.31610/zsr/2020.29.1.58, http://zenodo.org/record/10124232
Additional file 1: of MaGuS: a tool for quality assessment and scaffolding of genome assemblies with Whole Genome Profiling™ Data
Creators: name: Mohammed-Amin Madoui
name: Dossat, Carole
name: D’Agata, Léo
name: Oeveren, Jan Van
name: Vossen, Edwin Van Der
name: Jean-Marc Aury
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Marine Biology

description: The supporting data are included as a single additional file which contains Figure S1, Table S2 and Table S3. (DOCX 38 kb)
Additional file 5: Table S2. of Transcriptome-wide identification and expression profiles of the WRKY transcription factor family in Broomcorn millet (Panicum miliaceum L.)
Creators: name: Yue, Hong
name: Wang, Meng
name: Siyan Liu
name: Xianghong Du
name: Weining Song
name: Xiaojun Nie
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Primers of 32 PmWRKY genes. (DOC 54 kb)
Eubezverkhovia huanchaca Gorochov et Izerskyy 2020, comb. nov.
Creators: name: Gorochov, A. V.
name: Izerskyy, V. V.
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Gryllidae
Eubezverkhovia

description: Eubezverkhovia? huanchaca (Gorochov, 2017), comb. nov.
Tafalisca? huanchaca Gorochov, 2017: 89. Bezverkhovia? huanchaca: Gorochov, 2018: 82.
description: Published as part of Gorochov, A. V. & Izerskyy, V. V., 2020, A new replacement name for Bezverkhovia Gorochov, 2018 (Orthoptera: Gryllidae: Podoscirtinae), pp. 58-59 in Zoosystematica Rossica (Zoosyst. Rossica) (Zoosyst. Rossica) 29 (1) on page 29, DOI: 10.31610/zsr/2020.29.1.58, http://zenodo.org/record/10124232
Differences in femoral component subsidence rate after THA using an uncemented collarless femoral stem: full weight-bearing with an enhanced recovery rehabilitation versus partial weight-bearing
Creators: name: Leiss, Franziska
name: Götz, Julia Sabrina
name: Meyer, Matthias
name: Maderbacher, Günther
name: Reinhard, Jan
name: Parik, Lukas
name: Grifka, Joachim
name: Greimel, Felix
Publisher: name: Universität Regensburg
Year: 2021
Subjects: subject: TOTAL HIP-ARTHROPLASTY; FOLLOW-UP; IMPLANTS; MOTION; MICROMOTION; PROSTHESES; FIXATION; TITANIUM; 10-YEAR; METAL; Stem subsidence; Total hip arthroplasty; Cementless THA; Enhanced recovery; Weight-bearing
subject: 610 Medizin

description: Background Femoral component subsidence is a known risk factor for early failure of total hip arthroplasty (THA) using cementless stems. The aim of the study was to compare an enhanced recovery concept with early full weight-bearing rehabilitation and partial weight-bearing on stem subsidence. In addition, the influence of patient-related and anatomical risk factors on subsidence shall be assessed. Methods One hundred and fourteen patients underwent primary cementless THA and were retrospectively analyzed. Sixty-three patients had an enhanced recovery rehabilitation with early full weight-bearing and 51 patients had rehabilitation with partial weight-bearing (20 kg) for 6 weeks. Postoperative subsidence was analyzed on standing pelvic anterior-posterior radiographs after 4 weeks and 1 year. Subsidence was measured in mm. Anatomical and prosthetic risk factors (stem size, canal flare index, canal fill ratio as well as BMI and demographic data) were correlated. Results Femoral stem subsidence rate was significantly higher for the group with an enhanced recovery concept compared to the group with partial weight-bearing at the first radiological follow up after 4 weeks [2.54 mm (SD +/- 1.86) vs. 1.55 mm (SD +/- 1.80)] and the second radiological follow up after 1 year [3.43 mm (SD +/- 2.24) vs. 1.94 (SD +/- 2.16)] (p < 0.001, respectively). Stem angulation > 3 degrees had a significant influence on subsidence. Canal flare index and canal fill ratio showed no significant correlation with subsidence as well as BMI and age. Conclusion In the present study, cementless stem subsidence was significantly higher in the group with enhanced recovery rehabilitation compared to partial weight-bearing. Small absolute values and differences were demonstrated and therefore possibly below clinical relevance. Anatomical radiological parameters and anthropometric data did not appear to be risk factors for stem subsidence.
Additional file 4: Figure S3. of Transcriptome-wide identification and expression profiles of the WRKY transcription factor family in Broomcorn millet (Panicum miliaceum L.)
Creators: name: Yue, Hong
name: Wang, Meng
name: Siyan Liu
name: Xianghong Du
name: Weining Song
name: Xiaojun Nie
Publisher: name: Figshare
Year: 2016
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Expression level of 32 PmWRKY genes in different tissues. Actin was an internal reference gene. (DOC 797 kb)