cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Sucrose esters of aryldihydronaphthalene-type lignans, and antitumor activity of extracts of Moltkiopsis ciliata (Forssk.) aerial parts
Creators: name: Moustafa, Amal Mahmoud Youssef
name: Abdel-Moneim, Mohamed
name: Mostafa, Mohamed E.
name: Abdel-Mogib, Mamdouh
name: Abdel-Hak, Marwa Rabee
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Biochemistry
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Plant Biology

description: One new compound (3f-[(7′R,8′R)-4,4′-dihydroxy-5-methoxy-2,7′-cycloligna-7-en-9-methoxycarbonyl, 9′-carbonyl-O-] -β- D-fructofuranosyl- (2→1)-α- D-glucopyranoside) (Moltkiopsin A) (2) was isolated and identified from the extract of aerial parts of the wild Egyptian plant Moltkiopsis ciliata (Frossk.), family Boraginaceae, for the first time, along with two aryldihydronaphthalene lignans 3f→9′:6f→9-[(7′R,8′R)-4,4′- dihydroxy-3,3′,5-trimethoxy-2,7′-cycloligna-7-en-9,9′-dicarbonyl]-6g-acetyl-α-D-gluco pyranosyl-(1→2) -β-D-fructofuranoside (Trigonotin A) (1) which was reported for the first time from this plant species and a known compound 3f→9′:6f→9-[(7′R,8′R)-4,4′- dihydroxy-3,3′,5-trimethoxy-2,7′-cycloligna-7-en-9,9′-dicarbonyl]-α-D-gluco pyranosyl - (1→2)- β-D- fructofuranoside (Trigonotin C) (3). These compounds were separated and purified using different chromatographic techniques and their structures were elucidated by extensive 1D (1H and 13C NMR), and 2D NMR (COSY, HSQC, and HMBC), besides ESI-MS spectral methods. Extracts were screened as antioxidant, antitumor and antibacterial. The different extracts showed moderate to strong antioxidant capacities in DPPH assays. Ethyl acetate, methylene chloride and crude methanol extracts exhibited the most significant free radicals scavenging activity when compared to the standard antioxidant vitamin C. Hexane and butanol fractions showed the highest cytotoxicity against the cancer cell lines HepG2 and MCF-7.
Blakea trinervia Linnaeus 1759
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Melastomataceae
Blakea
Blakea trinervia

description: Blakea trinervia Linnaeus, Systema Naturae, ed. 10, 2: 1044. 1759.
["Habitat in Jamaica."] Sp. Pl., ed. 2, 1: 635 (1762). RCN: 3436.
Type not designated.
 Original material: Browne, Herb. Linn. No. 612.1 (LINN); [icon] in Browne, Civ. Nat. Hist. Jamaica: 323, t. 35. 1756.
 Current name: Blakea trinervia L. (Melastomataceae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part B), pp. 343-369 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 353, DOI: 10.5281/zenodo.291971
Additional file 1: of Exposure to revised drinking guidelines and â COM-Bâ determinants of behaviour change: descriptive analysis of a monthly cross-sectional survey in England
Creators: name: Stevely, Abigail
name: Buykx, Penny
name: Brown, Jamie
name: Beard, Emma
name: Michie, Susan
name: Meier, Petra
name: Holmes, John
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Pharmacology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Trends in reported drinking guideline exposure and responses to COM-B measures. (DOCX 26Â kb)
Bellucia grossularioides Triana 1871
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Melastomataceae
Bellucia
Bellucia grossularioides

description: Blakea triplinervia Linnaeus, Plantae Surinameses: 9. 1775.
"Habitat [in Surinamo.]" RCN: 3437.
Type not designated.
Original material: Herb. Linn. No. 612.2 (LINN).
 Current name: Bellucia grossularioides (L.) Triana (Melastomataceae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part B), pp. 343-369 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 353, DOI: 10.5281/zenodo.291971
Additional File 1:
Creators: name: Rovas, Alexandros
name: Alexander-Henrik Lukasz
name: Vink, Hans
name: Urban, Marc
name: Sackarnd, Jan
name: Pavenstädt, Hermann
name: Kümpers, Philipp
Publisher: name: figshare
Year: 2018
Subjects: subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology

description: Standard Operating Procedure (SOP) (DOCX 16 kb)
Blasia pusilla Linnaeus 1753
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Bryophyta
Marchantiopsida
Blasiales
Blasiaceae
Blasia
Blasia pusilla

description: Blasia pusilla Linnaeus, Species Plantarum 2: 1138. 1753.
"Habitat in Europa ad latera fossarum, solo ex arena sterili." RCN: 8147.
 Lectotype (Bonner, Index Hepaticarum 3: 420. 1963): [icon] " Blasia pusilla, Lichenis pyxidati facie" in Micheli, Nov. Pl. Gen.: 14, t. 7. 1729.
 Generitype of Blasia Linnaeus.
 Current name: Blasia pusilla L. (Blasiaceae).
 Note: See discussion of some of the original elements by Isoviita (in Acta Bot. Fenn. 89: 8. 1970) and Grolle (in Feddes Repert. 87: 182. 1976).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part B), pp. 343-369 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 353, DOI: 10.5281/zenodo.291971
title: 03_0898
Creators: name: Wesley Baldwin, John
name: Baldwin, John W.
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2018
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: L'ensemble de ces notes ont été crée par John Baldwin lors d'une de ses premières périodes de résidence à Paris. Ces documents comprennent tous les magistri qu’il avait pu rencontrer dans ses sources. Aux XIIème et XIIIème siècles, les universités n'existant pas encore, le titre de magister s'il évoque certainement une compétence n'est pas rattaché de façon systématique au passage par les écoles. De surcroît, les magistris sont le plus souvent désignés par leur seul prénom. La lecture de ces données est donc difficile et suppose un long travail pour tenter d'identifier un individu auquel on pourrait rattacher plusieurs mentions. John Baldwin avait donc renoncé à utiliser ces données pour donner un prolongement à sa magnifique étude sur les gradués d'université et leur emploi par les Capétiens et les Plantagenêts. Néanmoins, il a conservé ces données et elles sont potentiellement très utile dans le cadre de Studium, comme le sont toutes les mentions dans les volumes des Fasti Ecclesiae Gallicanae de chanoines portant ce titre de magister sans autres précisions. L'ampleur des dépouillements rend ces données très utiles et nous devons une grande reconnaissance à John Baldwin pour avoir pris la peine de faire photocopier ses fiches et de nous les avoir transmises amicalement.
Les données ainsi que les images des fiches sont accessibles sur le site Internet à l'adresse suivante : http://studium-baldwin.lamop.fr/.
Les transcriptions des fiches ont été effectuées par des étudiants de Paris 1 Panthéon - Sorbonne mais elles n'ont pas été corrigées par la suite.
description: Relation: https://lamop.hypotheses.org/
Asymptotic structure of $\mathcal{N}=2$ supergravity in 3D: extended super-BMS$_3$ and nonlinear energy bounds
Creators: name: Fuentealba, Oscar
name: Matulich, Javier
name: Troncoso, Ricardo
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: The asymptotically flat structure of $\mathcal{N}=(2,0)$ supergravity in three spacetime dimensions is explored. The asymptotic symmetries are spanned by an extension of the super-BMS$_3$ algebra, with two independent $\hat{u}(1)$ currents of electric and magnetic type. These currents are associated to $U(1)$ fields being even and odd under parity, respectively. Remarkably, although the $U(1)$ fields do not generate a backreaction on the metric, they provide nontrivial Sugawara-like contributions to the BMS$_3$ generators, and hence to the energy and the angular momentum. The entropy of flat cosmological spacetimes with $U(1)$ fields then acquires a nontrivial dependence on the $\hat{u}(1)$ charges. If the spin structure is odd, the ground state corresponds to Minkowski spacetime, and although the anticommutator of the canonical supercharges is linear in the energy and in the electric-like $\hat{u}(1)$ charge, the energy becomes bounded from below by the energy of the ground state shifted by the square of the electric-like $\hat{u}(1)$ charge. If the spin structure is even, the same bound for the energy generically holds, unless the absolute value of the electric-like charge is less than minus the mass of Minkowski spacetime in vacuum, so that the energy has to be nonnegative. The explicit form of the Killing spinors is found for a wide class of configurations that fulfills our boundary conditions, and they exist precisely when the corresponding bounds are saturated. It is also shown that the spectra with periodic or antiperiodic boundary conditions for the fermionic fields are related by spectral flow, in a similar way as it occurs for the $\mathcal{N}=2$ super-Virasoro algebra. Indeed, our super-BMS$_3$ algebra can be recovered from the flat limit of the superconformal algebra with $\mathcal{N}=(2,2)$, truncating the fermionic generators of the right copy.
description: 32 pages, no figures. Talk given at the ESI Programme and Workshop "Quantum Physics and Gravity" hosted by ESI, Vienna, June 2017. V3: minor changes and typos corrected. Matches published version
Additional file 7: of Porcine Whartonâ s jelly cells distribute throughout the body after intraperitoneal injection
Creators: name: Kreeson Packthongsuk
name: Rathbun, Theresa
name: Deryl Troyer
name: Davis, Duane
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: Table S2. SRY-positive samples for each female recipient at 1Â week after intraperitoneal transplantation. (DOCX 18 kb)
Blechnum australe Linnaeus 1767
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Polypodiopsida
Polypodiales
Blechnaceae
Blechnum
Blechnum australe

description: Blechnum australe Linnaeus, Systema Naturae, ed. 12, 2: 688; Mantissa Plantarum: 130. 1767.
"Habitat ad Cap. b. Spei." RCN: 7817.
 Lectotype (Schelpe in J. Linn. Soc., Bot. 53: 508. 1952): Herb. Linn. No. 1247.3 (LINN).
 Current name: Blechnum australe L. (Blechnaceae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part B), pp. 343-369 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 353, DOI: 10.5281/zenodo.291971
title: ADCO, Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Cart. 32 (G 136), 745 folios, f. 0635
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
name: Petot, Frédéric
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: cartulaire
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Archives départementales de la Côte-d'Or, Cart. 32 (G 136), 745 folios, f. 0635, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Archives départementales de la Côte-d'Or, Cart. 32 (G 136), 745 folios, f. 0635, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
Cyclic Homology and Group Actions
Creators: name: Ponge, Raphael
Publisher: name: arXiv
Year: 2017
Subjects: subject: K-Theory and Homology (math.KT)
subject: Differential Geometry (math.DG)
subject: Operator Algebras (math.OA)
subject: FOS: Mathematics
subject: 19D55, 20J06, 55N91

description: In this paper we present the construction of explicit quasi-isomorphisms that compute the cyclic homology and periodic cyclic homology of crossed-product algebras associated with (discrete) group actions. In the first part we deal with algebraic crossed-products associated with group actions on unital algebras over any ring $k\supset \mathbb{Q}$. In the second part, we extend the results to actions on locally convex algebras. We then deal with crossed-products associated with group actions on manifolds and smooth varieties. For the finite order components, the results are expressed in terms of what we call "mixed equivariant cohomology". This "mixed" theory mediates between group homology and de Rham cohomology. It is naturally related to equivariant cohomology, and so we obtain explicit constructions of cyclic cycles out of equivariant characteristic classes. For the infinite order components, we simplify and correct the misidentification of Crainic. An important new homological tool is the notion of "triangular $S$-module". This is a natural generalization of the cylindrical complexes of Getzler-Jones. It combines the mixed complexes of Burghelea-Kassel and parachain complexes of Getzler-Jones with the $S$-modules of Kassel-Jones. There are spectral sequences naturally associated with triangular $S$-modules. In particular, this allows us to recover spectral sequences Feigin-Tsygan and Getzler-Jones and leads us to a new spectral sequence.
description: v2: final version. To appear in J. Geom. Phys. (special issue in honor of Alain Connes), 27 pages
Additional file 9: of Utility of SOFA score, management and outcomes of sepsis in Southeast Asia: a multinational multicenter prospective observational study
Creators: name: Khie Lie
name: Chuen-Yen Lau
name: Nguyen Van Vinh Chau
name: T. West
name: Direk Limmathurotsakul
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Table S8. Number of organ system failures (maximum SOFA score ≥ 3 points) up to 24 h of admission and 28-day mortality in sepsis patients. (DOCX 61 kb)
Blechnum occidentale Linnaeus 1753
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Polypodiopsida
Polypodiales
Blechnaceae
Blechnum
Blechnum occidentale

description: Blechnum occidentale Linnaeus, Species Plantarum 2: 1077. 1753.
"Habitat in America meridionali." RCN: 7815.
 Lectotype (Proctor in Howard, Fl. Lesser Antilles 2: 156. 1977): Herb. Linn. No. 1247.1 (LINN), see above, right.
 Generitype of Blechnum Linnaeus (vide Smith, Hist. File. 300. 1875).
 Current name: Blechnum occidentale L. (Blechnaceae).
 Note: Linnaeus evidently transposed the epithets “occidentale” and “orientale” in describing his two species of Blechnum in 1753.
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part B), pp. 343-369 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 353, DOI: 10.5281/zenodo.291971
Blechnum orientale Linnaeus 1753
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Polypodiopsida
Polypodiales
Blechnaceae
Blechnum
Blechnum orientale

description: Blechnum orientale Linnaeus, Species Plantarum 2: 1077. 1753.
"Habitat in China. Osbeck." RCN: 7616.
Type not designated.
Original material: none traced.
 Current name: Blechnum orientale L. (Blechnaceae).
 Note: Linnaeus evidently transposed the epithets “occidentale” and “orientale” in describing his two species of Blechnum in 1753. See Hansen & Fox Maule (in Bot. J. Linn. Soc. 67: 207. 1973) for comments on Osbeck material.
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part B), pp. 343-369 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 353, DOI: 10.5281/zenodo.291971
"E-MA'MURIY ISH"– TIZIMI BUGUNGI HOLATI VA ISTIQBOLI
Creators: name: Otajonov, Rajabboy
Publisher: name: Zenodo
Year: 2024

description: O‘zbekistonda olib borilayotgan keng ko‘lamli islohotlar natijasida davlat boshqaruvi organlari va boshqa barcha tarmoq sohalari tizimda zamonaviy axborot kommunikatsiya texnologiyalarini joriy etish, vazirlik va idoralarning axborot tizimlari o‘zaro integratsiyalashuvi, uning uzluksiz ishlashi, axborot xavfsizligi ta’minlanishi, raqamlashtirish orqali xalqimizga qulayliklar yaratishga qaratilgan kompleks chora-tadbirlar amalga oshirilib kelinmoqda.
Realizing Majorana zero modes in superconductor-semiconductor heterostructures
Creators: name: Lutchyn, R. M.
name: Bakkers, E. P. A. M.
name: Kouwenhoven, L. P.
name: Krogstrup, P.
name: Marcus, C. M.
name: Oreg, Y.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Realizing topological superconductivity and Majorana zero modes in the laboratory is one of the major goals in condensed matter physics. We review the current status of this rapidly-developing field, focusing on semiconductor-superconductor proposals for topological superconductivity. Material science progress and robust signatures of Majorana zero modes in recent experiments are discussed. After a brief introduction to the subject, we outline several next-generation experiments probing exotic properties of Majorana zero modes, including fusion rules and non-Abelian exchange statistics. Finally, we discuss prospects for implementing Majorana-based topological quantum computation in these systems.
description: 20 pages, 8 figures, review article
Vital, Orderic, Histoire de Normandie, traduit par Louis-François du Bois, Paris, J.-L.-J. Brière, 1827, tome 4
Creators: name: Vital, Orderic
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2019

description: Source: https://gallica.bnf.fr/ark:/12148/bpt6k946202
description: Relation: vignette : https://www.nakala.fr/data/11280/811b85b0
Additional file 2: of Adherence to Mediterranean and low-fat diets among heart and lung transplant recipients: a randomized feasibility study
Creators: name: Entwistle, Timothy
name: AdĂ¨Le Green
name: Fildes, James
name: Miura, Kyoko
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Plant Biology

description: Table S2. AMEND-IT 9-point low-fat diet adherence questionnaire. (PDF 79 kb)
title: The role of individual protein turnover in skeletal muscle adaptation
Creators: name: Hesketh, S
Publisher: name: Liverpool John Moores University
Year: 2022

description: Skeletal muscle tissue demonstrates a remarkable malleability and can adjust its metabolic and contractile makeup in response to alterations in functional demands. As a result, great diversity exists in muscle physiology, biochemistry and energy metabolism, all of which are underpinned by the functional changes in the abundance of individual proteins. The proteome represents a highly dynamic and versatile entity that coordinates the adaptive response of skeletal muscle through adjustments in individual protein turnover as well as abundance. Until very recently, research relating to protein turnover was largely limited to average synthesis rates of protein mixtures, e.g. from whole muscle homogenates. This project utilises our new methodology, coined dynamic proteome profiling, combining deuterium labelling and advanced proteomic techniques with computational biology, to investigate muscle protein dynamics at the individual protein level. We have used programmed exercise to perturb skeletal muscle in vivo for the purposes of studying two contrasting types of muscle adaptation, each over a chronic 30-day period. The first is an endurance stimulus that induced changes in protein abundance for 50 individual muscle proteins. Of these changes, 30 % were driven by changes in synthesis, 38 % were driven by degradation only and the remaining 32 % by changes in a combination of both synthesis and degradation. We also provide new evidence to demonstrate that in response to resistance exercise training individual proteins increase the rates of protein turnover and can be selectively degraded at varying rates to alter individual protein abundances. As a result, we report, 27 of 91 proteins studied exhibited a change in abundance in response to muscle hypertrophy. Of which 96 % were driven by synthesis and 4 % of proteins were driven by degradation. For the remaining 64 proteins that did not change in abundance, 36 % increased protein turnover, 17 % decreased in protein turnover and 47 % of proteins were unaffected by our resistance exercise training stimulus. This work is the first of its kind and presents a highly novel contribution to the rapidly growing field of exercise proteomics.
How to disentangle psychobiological stress reactivity and recovery: A comparison of model-based and non-compartmental analyses of cortisol concentrations
Creators: name: Miller, Robert
name: Wojtyniak, Jan-Georg
name: Weckesser, Lisa
name: Alexander, Nina
name: Engert, Veronika
name: Lehr, Thorsten
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantitative Methods (q-bio.QM)
subject: FOS: Biological sciences

description: This article seeks to address the prevailing issue of how to measure specific process components of psychobiological stress responses. Particularly the change of cortisol secretion due to stress exposure has been discussed as an endophenotype of many psychosomatic health outcomes. To assess its process components, a large variety of non-compartmental parameters (i.e., composite measures of substance concentrations at different points in time) like the area under the concentration-time curve (AUC) are utilized. However, a systematic evaluation and validation of these parameters based on a physiologically plausible model of cortisol secretion has not been performed so far. Thus, a population pharmacokinetic (mixed-effects SDE) model was developed and fitted to densely sampled salivary cortisol data of 10 males from Montreal, Canada, and sparsely sampled data of 200 mixed-sex participants from Dresden, Germany, who completed the Trier Social Stress Test (TSST). Besides the two major process components representing (1) stress-related cortisol secretion (reactivity) and (2) cortisol elimination (recovery), the model incorporates two additional, often disregarded components: (3) the secretory delay after stress onset, and (4) deviations from the projected steady-state concentration. The fitted model (R2 = 99%) was thereafter used to investigate the correlation structure of the four individually varying, and readily interpretable model parameters and eleven popular non-compartmental parameters. Based on these analyses, we recommend to use the minimum-maximum cortisol difference and the minimum concentration as proxy measures of reactivity and recovery, respectively. Finally, statistical power analyses of the reactivity-related sex effect illustrate the consequences of using impure non-compartmental measures of the different process components that underlie the cortisol stress response.
description: 49 pages, 10 figures, 4 tables
Additional file 6: of Porcine Whartonâ s jelly cells distribute throughout the body after intraperitoneal injection
Creators: name: Kreeson Packthongsuk
name: Rathbun, Theresa
name: Deryl Troyer
name: Davis, Duane
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Plant Biology
subject: Computational Biology

description: Table S1. Phenotype of porcine WJCs. Percent of porcine WJCs that were positive for CD90, CD44, CD105, CD31, CD45, and SLA-DR. (DOCX 14 kb)
Visual pathways from the perspective of cost functions and multi-task deep neural networks
Creators: name: Scholte, H. Steven
name: Losch, Max M.
name: Ramakrishnan, Kandan
name: de Haan, Edward H. F.
name: Bohte, Sander M.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Neurons and Cognition (q-bio.NC)
subject: FOS: Biological sciences

description: Vision research has been shaped by the seminal insight that we can understand the higher-tier visual cortex from the perspective of multiple functional pathways with different goals. In this paper, we try to give a computational account of the functional organization of this system by reasoning from the perspective of multi-task deep neural networks. Machine learning has shown that tasks become easier to solve when they are decomposed into subtasks with their own cost function. We hypothesize that the visual system optimizes multiple cost functions of unrelated tasks and this causes the emergence of a ventral pathway dedicated to vision for perception, and a dorsal pathway dedicated to vision for action. To evaluate the functional organization in multi-task deep neural networks, we propose a method that measures the contribution of a unit towards each task, applying it to two networks that have been trained on either two related or two unrelated tasks, using an identical stimulus set. Results show that the network trained on the unrelated tasks shows a decreasing degree of feature representation sharing towards higher-tier layers while the network trained on related tasks uniformly shows high degree of sharing. We conjecture that the method we propose can be used to analyze the anatomical and functional organization of the visual system and beyond. We predict that the degree to which tasks are related is a good descriptor of the degree to which they share downstream cortical-units.
description: 16 pages, 5 figures
Measurement of inclusive and differential cross sections in the $H \rightarrow ZZ^* \rightarrow 4\ell$ decay channel in $pp$ collisions at $\sqrt{s}$ = 13 TeV with the ATLAS detector
Creators: name: ATLAS Collaboration
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: Inclusive and differential fiducial cross sections of Higgs boson production in proton-proton collisions are measured in the $H \rightarrow ZZ^* \rightarrow 4\ell$ decay channel. The proton-proton collision data were produced at the Large Hadron Collider at a centre-of-mass energy of 13 TeV and recorded by the ATLAS detector in 2015 and 2016, corresponding to an integrated luminosity of 36.1 fb$^{-1}$. The inclusive fiducial cross section in the $H \rightarrow ZZ^* \rightarrow 4\ell$ decay channel is measured to be 3.62 $\pm$ 0.50 (stat) $^{+0.25}_{-0.20}$ (sys) fb, in agreement with the Standard Model prediction of 2.91 $\pm$ 0.13 fb. The cross section is also extrapolated to the total phase space including all Standard Model Higgs boson decays. Several differential fiducial cross sections are measured for observables sensitive to the Higgs boson production and decay, including kinematic distributions of jets produced in association with the Higgs boson. Good agreement is found between data and Standard Model predictions. The results are used to put constraints on anomalous Higgs boson interactions with Standard Model particles, using the pseudo-observable extension to the kappa-framework.
description: 49 pages in total, author list starting page 33, 11 figures, 4 tables, published in JHEP. All figures including auxiliary figures are available at http://atlas.web.cern.ch/Atlas/GROUPS/PHYSICS/PAPERS/HIGG-2016-25/
Woodwardia radicans Sm.
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Polypodiopsida
Polypodiales
Blechnaceae
Woodwardia
Woodwardia radicans

description: Blechnum radicans Linnaeus, Mantissa Plantarum Altera: 307. 1771.
"Habitat in Virginiae et Maderae rimis rupium profundis argillaceis. König.” RCN: 7818.
 Lectotype (designated here by Reveal): König s.n. , Herb. Linn. No. 1247.4 (LINN).
 Current name: Woodwardia radicans (L.) Sm. (Blechnaceae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part B), pp. 343-369 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 353, DOI: 10.5281/zenodo.291971
Generalizing Entanglement
Creators: name: Jia, Ding
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The expected indefinite causal structure in quantum gravity poses a challenge to the notion of entanglement: If two parties are in an indefinite causal relation of being spacelike and timelike, can they still be entangled? If so, how does one measure the amount of entanglement? We propose to generalize the notions of entanglement and entanglement measure to address these questions. Incidentally but importantly, the generalization opens the path to study quantum entanglement of states, channels, networks and processes with definite or indefinite causal structure in a unified fashion, e.g., we show that the entanglement distillation capacity of a state, the quantum communication capacity of a channel, and the entanglement generation capacity of a network or a process are different manifestations of one and the same entanglement measure.
description: 21 pages, 5 figures, update to match published version
Woodwardia virginica Sm.
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Polypodiopsida
Polypodiales
Blechnaceae
Woodwardia
Woodwardia virginica

description: Blechnum virginicum Linnaeus, Mantissa Plantarum Altera 2: 307. 1771.
"Habitat in Virginia." RCN: 7818.
Type not designated.
Original material: none traced.
 Current name: Woodwardia virginica (L.) Sm. (Blechnaceae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part B), pp. 343-369 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 353, DOI: 10.5281/zenodo.291971
Adiabatic and nonadiabatic spin torques induced by spin-triplet supercurrent
Creators: name: Takashima, Rina
name: Fujimoto, Satoshi
name: Yokoyama, Takehito
Publisher: name: arXiv
Year: 2017
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Other Condensed Matter (cond-mat.other)
subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: We study spin transfer torques induced by a spin-triplet supercurrent in a magnet with the superconducting proximity effect. By a perturbative approach, we show that spin-triplet correlations realize new types of torques, which are analogous to the adiabatic and non-adiabatic ($β$) torques, without extrinsic spin-flip scattering. Remarkable advantages compared to conventional spin-transfer torques are highlighted in domain wall manipulation. Oscillatory motions of a domain wall do not occur for a small Gilbert damping, and the threshold current density to drive its motion becomes zero in the absence of extrinsic pinning potentials due to the nonadiabatic torque controlled by the triplet correlations.
description: 5 pages, 3 figures (accepted for publication in Phys.Rev.B Rapid Communications)
Temporally and spectrally multiplexed single photon source using quantum feedback control for scalable photonic quantum technologies
Creators: name: Heuck, Mikkel
name: Pant, Mihir
name: Englund, Dirk
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Current proposals for scalable photonic quantum technologies require on-demand sources of indistinguishable single photons with very high efficiency (having unheralded loss below $1\%$). Even with recent progress in the field there is still a significant gap between the requirements and state of the art performance. Here, we propose an on-chip source of multiplexed, heralded photons. Using quantum feedback control on a photon storage cavity with an optimized driving protocol, we estimate an on-demand efficiency of $99\%$ and unheralded loss of order $1\%$, assuming high efficiency detectors and intrinsic cavity quality factors of order $10^8$. We further explain how temporal- and frequency-multiplexing can be used in parallel to significantly reduce device requirements if single photon frequency conversion is possible with efficiency in the same range of $99\%$.
Create and a Handle Data Management Plan
Creators: name: Bianchini, Federico
name: Fatima, Nazeefa
Publisher: name: Zenodo
Year: 2024

description: This is the training material used for a workshop at the 2023 edition of the Oslo Bioinformatics Workshop week

This workshop aims to provide a hands-on session on creating a data management plan (DMP) using the Data Stewardship Wizard (DSW), a dynamic web forms system provided by ELIXIR Europe. The Norwegian node of ELIXIR is curating a national instance of DSW (https://elixir-no.ds-wizard.org) and provides a DMP form customised for life scientists in Norway. The audience will learn about the information that needs to be captured into a DMP and how to use DSW for this purpose. We will demonstrate how to create a DMP, starting either from scratch or from a set of recommendations based on specific scientific domains including, among others, sequencing, light microscopy and high-throughput screening. A demonstration of how to work collaboratively on DMPs and how to export them to a document compliant with national and international funding bodies' requirements will also be given. In the second part of the workshop, the participants will work, individually or as groups, on a DMP for projects they are involved in or for projects of interest.
Fluctuations of Apparent Entropy Production in Networks with Hidden Slow Degrees of Freedom
Creators: name: Uhl, Matthias
name: Pietzonka, Patrick
name: Seifert, Udo
Publisher: name: arXiv
Year: 2017
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: The fluctuation theorem for entropy production is a remarkable symmetry of the distribution of produced entropy that holds universally in non-equilibrium steady states with Markovian dynamics. However, in systems with slow degrees of freedom that are hidden from the observer, it is not possible to infer the amount of produced entropy exactly. Previous work suggested that a relation similar to the fluctuation theorem may hold at least approximately for such systems if one considers an apparent entropy production. By extending the notion of apparent entropy production to discrete bipartite systems, we investigate which criteria have to be met for such a modified fluctuation theorem to hold in the large deviation limit. We use asymptotic approximations of the large deviation function to show that the probabilities of extreme events of apparent entropy production always obey a modified fluctuation theorem and, moreover, that it is possible to infer otherwise hidden properties. For the paradigmatic case of two coupled colloidal particles on rings the rate function of the apparent entropy production is calculated to illustrate this asymptotic behavior and to show that the modified fluctuation theorem observed experimentally for short observation times does not persist in the long time limit.
description: 24 pages, 8 figures
Additional file 8: of Utility of SOFA score, management and outcomes of sepsis in Southeast Asia: a multinational multicenter prospective observational study
Creators: name: Khie Lie
name: Chuen-Yen Lau
name: Nguyen Van Vinh Chau
name: T. West
name: Direk Limmathurotsakul
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Cell Biology
subject: Pharmacology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Science Policy

description: Table S7. Pathogens identified in non-survivors and survivors. (DOCX 71Â kb)
title: ADCO, Cinquième cartulaire de Saint-Étienne de Dijon (1664), Cart. 28 (G 132), 258 folios, f. 00015
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: cartulaire

description: Cinquième cartulaire de Saint-Étienne de Dijon (1664), Archives départementales de la Côte-d'Or, Cart. 28 (G 132), 258 folios, f. 00015, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cinquième cartulaire de Saint-Étienne de Dijon (1664), Archives départementales de la Côte-d'Or, Cart. 28 (G 132), 258 folios, f. 00015, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https://manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
Chenopodium capitatum Ach.
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Caryophyllales
Amaranthaceae
Chenopodium
Chenopodium capitatum

description: Blitum capitatum Linnaeus, Species Plantarum 1: 4. 1753.
"Habitat in Europa praesertim in comit. Tyrolensi." RCN: 34.
 Lectotype (Jonsell & Jarvis in Jarvis & al, Regnum Veg. 127: 25. 1993): Herb. Linn. No. 14.1 (LINN).
 Generitype of Blitum Linnaeus (vide Hitchcock, Prop. Brit. Bot.: 115. 1929).
 Current name: Chenopodium capitatum (L.) Ach. (Chenopodiaceae).
 Note: Jonsell & Jarvis (in Nordic J. Bot. 14: 155. 1994) give an explanation of the reasons for their formal 1993 type choice.
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part B), pp. 343-369 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 353, DOI: 10.5281/zenodo.291971
Chern-Simons Composite Fermion Theory of Fractional Chern Insulators
Creators: name: Sohal, Ramanjit
name: Santos, Luiz H.
name: Fradkin, Eduardo
Publisher: name: arXiv
Year: 2017
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We formulate a Chern-Simons composite fermion theory for Fractional Chern Insulators (FCIs), whereby bare fermions are mapped into composite fermions coupled to a lattice Chern-Simons gauge theory. We apply this construction to a Chern insulator model on the kagome lattice and identify a rich structure of gapped topological phases characterized by fractionalized excitations including states with unequal filling and Hall conductance. Gapped states with the same Hall conductance at different filling fractions are characterized as realizing distinct symmetry fractionalization classes.
description: 14 pages, 7 figures. Expanded version in PRB format with revised mean field analysis (conclusions are essentially unchanged)
Additional file 1 of The role of lactose in weanling pig nutrition: a literature and meta-analysis review
Creators: name: Zhao, Jinbiao
name: Zhang, Zeyu
name: Zhang, Shuai
name: Page, Greg
name: Jaworski, Neil W.
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Physiology
subject: Chemical Sciences not elsewhere classified
subject: Ecology

description: Additional file 1: Supplementary Figure 1. Meta-analysis for the quadratic response of dietary lactose level on average daily feed intake (ADFI, g/d), average daily gain (ADG, g/d) and G:F (ADG:ADFI) of weanling pigs. Meta-analysis was performed using GLM procedure of SAS 9.4. A total of 7 studies containing 54 experimental diets with antibiotic growth promoter (AGP) addition and 4 studies containing 18 experimental diets without AGP were used to develop models to predict the response of lactose level on growth performance of pigs between d 0–14 post-wean. A total of 5 studies containing 28 experimental diets with AGP addition and 5 studies containing 26 experimental diets without AGP were used to develop models to predict the response of lactose level on growth performance of pigs between d 14–35 post-wean.
Chenopodium chenopodioides Aellen 1933
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Caryophyllales
Amaranthaceae
Chenopodium
Chenopodium chenopodioides

description: Blitum chenopodioides Linnaeus, Mantissa Plantarum Altera: 170. 1771.
"Habitat in Tataria; nunc in Svecia. H.V." RCN: 36.
 Neotype (Uotila in Ann. Bot. Fenn. 38: 96. 2001): Russia. Republic of Dagestan, In fonds Kislar, [early 1800s], C. Steven (H-1037202).
 Current name: Chenopodium chenopodioides (L.) Aellen (Chenopodiaceae).
 Note: See extensive discussion by Uotila, who rejects 14.3 and 14.4 (LINN) as original material on the grounds that they conflict with the protologue, and designates a neotype. This removes the possibility that the name might be a synonym of Chenopodium rubrum L., which had led some authors to informally reject B. chenopodioides.
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part B), pp. 343-369 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on pages 353-354, DOI: 10.5281/zenodo.291971
Additional file 1: of Adherence to Mediterranean and low-fat diets among heart and lung transplant recipients: a randomized feasibility study
Creators: name: Entwistle, Timothy
name: AdĂ¨Le Green
name: Fildes, James
name: Miura, Kyoko
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Table S1. AMEND-IT 14-point Mediterranean dietary adherence questionnaire. (PDF 80 kb)
Two-gap superconductivity in Mo$_{8}$Ga$_{41}$ and its evolution upon the V substitution
Creators: name: Verchenko, Valeriy Yu.
name: Khasanov, Rustem
name: Guguchia, Zurab
name: Tsirlin, Alexander A.
name: Shevelkov, Andrei V.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: Zero-field and transverse-field muon spin rotation/relaxation ($μ$SR) experiments were undertaken in order to elucidate microscopic properties of a strongly-coupled superconductor Mo$_{8}$Ga$_{41}$ with $T_{\text{c}}=9.8$ K. The upper critical field extracted from the transverse-field $μ$SR data exhibits significant reduction with respect to the data from thermodynamic measurements indicating the coexistence of two independent length scales in the superconducting state. Accordingly, the temperature-dependent magnetic penetration depth of Mo$_{8}$Ga$_{41}$ is described using the model, in which two s-wave superconducting gaps are assumed. The V for Mo substitution in the parent compound leads to the complete suppression of one superconducting gap, and Mo$_{7}$VGa$_{41}$ is well described within the single s-wave gap scenario. The reduction in the superfluid density and the evolution of the low-temperature resistivity upon the V substitution indicate the emergence of a competing state in Mo$_{7}$VGa$_{41}$ that may be responsible for the closure of one of the superconducting gaps.