cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Multiple Topological Electronic Phases in Superconductor MoC
Creators: name: Huang, Angus
name: Smith, Adam D.
name: Schwinn, Madison
name: Lu, Qiangsheng
name: Chang, Tay-Rong
name: Xie, Weiwei
name: Jeng, Horng-Tay
name: Bian, Guang
Publisher: name: arXiv
Year: 2017
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The search for a superconductor with non-s-wave pairing is important not only for understanding unconventional mechanisms of superconductivity but also for finding new types of quasiparticles such as Majorana bound states. Materials with both topological band structure and superconductivity are promising candidates as $p+ip$ superconducting states can be generated through pairing the spin-polarized topological surface states. In this work, the electronic and phonon properties of the superconductor molybdenum carbide (MoC) are studied with first-principles methods. Our calculations show that nontrivial band topology and superconductivity coexist in both structural phases of MoC, namely, the cubic $α$ and hexagonal $γ$ phases. The $α$ phase is a strong topological insulator and the $γ$ phase is a topological nodal line semimetal with drumhead surface states. In addition, hole doping can stabilize the crystal structure of the $α$ phase and elevate the transition temperature in the $γ$ phase. Therefore, MoC in different structural forms can be a practical material platform for studying topological superconductivity and elusive Majorana fermions.
description: 4 figures
Quantum phases, Supersolids and quantum phase transitions of interacting bosons in frustrated lattices
Creators: name: Chen, Yan
name: Ye, Jinwu
Publisher: name: arXiv
Year: 2006
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Materials Science (cond-mat.mtrl-sci)
subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: By using the dual vortex method (DVM), we develop systematically a simple and effective scheme to use the vortex degree of freedoms on dual lattices to characterize the symmetry breaking patterns of the boson insulating states in the direct lattices. Then we apply our scheme to study quantum phases and phase transitions in an extended boson Hubbard model slightly away from $ 1/3 $ ($ 2/3 $) filling on frustrated lattices such as triangular and kagome lattice. In a triangular lattice at $ 1/3 $, we find a X-CDW, a stripe CDW phase which was found perviously by a density operator formalism (DOF). Most importantly, we also find a new CDW-VB phase which has both local CDW and local VB orders, in sharp contrast to a bubble CDW phase found previously by the DOF. In the Kagome lattice at $ 1/3 $, we find a VBS phase and a 6 fold-CDW phase. Most importantly, we also identify a CDW-VB phase which has both local CDW and local VB orders which was found in previous QMC simulations. By analyzing carefully the saddle point structures of the dual gauge fields in the translational symmetry breaking sides and pushing the effective actions slightly away from the commensurate filling $ f=1/3 $($ 2/3 $), we classified all the possible types of supersolids and analyze their stability conditions. In a triangular lattice, there are X-CDW supersolid, stripe CDW supersolid, but absence of any valence bond supersolid (VB-SS). There are also a new kind of supersolid: CDW-VB supersolid. In a Kagome lattice, there are 6 fold-CDW supersolid, stripe CDW supersolid, but absence of any valence bond supersolid (VB-SS). There are also a new kind of supersolid: CDW-VB supersolid. Implications on QMC simulations with both nearest neighbor and next nearest neighbor interactions in both lattices are given.
description: REVTEX4, 25 PRB pages, 25 eps figures; To appear in Nucl. Phys. B in Dec. 2012
Additional file 7: of Gut microbiota in experimental murine model of Graves’ orbitopathy established in different environments may modulate clinical presentation of disease
Creators: name: Masetti, Giulia
name: Sajad Moshkelgosha
name: Hedda-Luise Köhling
name: Covelli, Danila
name: Banga, Jasvinder
name: Berchner-Pfannschmidt, Utta
name: Horstmann, Mareike
name: Diaz-Cano, Salvador
name: Gina-Eva Goertz
name: Plummer, Sue
name: Eckstein, Anja
name: Ludgate, Marian
name: Biscarini, Filippo
name: Marchesi, Julian Roberto
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified

description: Figure S1. Bifidobacterium counts derived from the 28F-combo primers in the TSHR-immunized mice in Center 1 (n = 5) and Center 2 (n = 10). ANOVA with Tukey’s HSD post hoc analysis (95% confidence interval), P value = 0.003 generated with STAMP. (PDF 21 kb)
Topology counts: force distributions in circular spring networks
Creators: name: Heidemann, Knut M.
name: Sageman-Furnas, Andrew O.
name: Sharma, Abhinav
name: Rehfeldt, Florian
name: Schmidt, Christoph F.
name: Wardetzky, Max
Publisher: name: arXiv
Year: 2017
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Biological Physics (physics.bio-ph)
subject: FOS: Physical sciences

description: Filamentous polymer networks govern the mechanical properties of many biological materials. Force distributions within these networks are typically highly inhomogeneous and, although the importance of force distributions for structural properties is well recognized, they are far from being understood quantitatively. Using a combination of probabilistic and graph-theoretical techniques we derive force distributions in a model system consisting of ensembles of random linear spring networks on a circle. We show that characteristic quantities, such as mean and variance of the force supported by individual springs, can be derived explicitly in terms of only two parameters: (i) average connectivity and (ii) number of nodes. Our analysis shows that a classical mean-field approach fails to capture these characteristic quantities correctly. In contrast, we demonstrate that network topology is a crucial determinant of force distributions in an elastic spring network.
description: 5 pages, 4 figures. Missing labels in Fig. 4 added. Reference fixed
Gapped Electronic Structure of Epitaxial Stanene on InSb(111)
Creators: name: Xu, Cai-Zhi
name: Chan, Yang-Hao
name: Chen, Peng
name: Wang, Xiaoxiong
name: Flötotto, David
name: Hlevyack, Joseph Andrew
name: Bian, Guang
name: Mo, Sung-Kwan
name: Chou, Mei-Yin
name: Chiang, Tai-Chang
Publisher: name: arXiv
Year: 2017
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Stanene (single-layer grey tin), with an electronic structure akin to that of graphene but exhibiting a much larger spin-orbit gap, offers a promising platform for room-temperature electronics based on the quantum spin Hall (QSH) effect. This material has received much theoretical attention, but a suitable substrate for stanene growth that results in an overall gapped electronic structure has been elusive; a sizable gap is necessary for room-temperature applications. Here, we report a study of stanene epitaxially grown on the (111)B-face of indium antimonide (InSb). Angle-resolved photoemission spectroscopy (ARPES) measurements reveal a gap of 0.44 eV, in agreement with our first-principles calculations. The results indicate that stanene on InSb(111) is a strong contender for electronic QSH applications.
description: 15 pages, 4 figures
The impact of energetic electron precipitation on mesospheric hydroxyl during a year of solar minimum
Creators: name: Zawedde, Annet Eva
name: Tyssøy, Hilde Nesse
name: Hibbins, Robert
name: Espy, Patrick J.
name: Ødegaard, Linn-Kristine Glesnes
name: Sandanger, Marit Irene
name: Stadsnes, Johan
Publisher: name: arXiv
Year: 2017
Subjects: subject: Space Physics (physics.space-ph)
subject: FOS: Physical sciences

description: In 2008 a sequence of geomagnetic storms occurred triggered by high-speed solar wind streams from coronal holes. Improved estimates of precipitating fluxes of energetic electrons are derived from measurements on board the NOAA/POES 18 satellite using a new analysis technique. These fluxes are used to quantify the direct impact of energetic electron precipitation (EEP) during solar minimum on middle atmospheric hydroxyl (OH) measured from the Aura satellite. During winter, localized longitudinal density enhancements in the OH are observed over northern Russia and North America at corrected geomagnetic latitudes poleward of 55$^{\circ}$. Although the northern Russia OH enhancement is closely associated with increased EEP at these longitudes, the strength and location of the North America enhancement appear to be unrelated to EEP. This OH density enhancement is likely due to vertical motion induced by atmospheric wave dynamics that transports air rich in atomic oxygen and atomic hydrogen downward into the middle atmosphere, where it plays a role in the formation of OH. In the Southern Hemisphere, localized enhancements of the OH density over West Antarctica can be explained by a combination of enhanced EEP due to the local minimum in Earth's magnetic field strength and atmospheric dynamics. Our findings suggest that even during solar minimum, there is substantial EEP-driven OH production. However, to quantify this effect, a detailed knowledge of where and when the precipitation occurs is required in the context of the background atmospheric dynamics.
Population synthesis for double white dwarfs I.Close detached systems
Creators: name: Nelemans, Gijs
name: Yungelson, Lev R.
name: Zwart, Simon F. Portegies
name: Verbunt, Frank
Publisher: name: arXiv
Year: 2000
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We model the population of double white dwarfs in the Galaxy and find a better agreement with observations compared to earlier studies, due to two modifications. The first is the treatment of the first phase of unstable mass transfer and the second the modelling of the cooling of the white dwarfs. A satisfactory agreement with observations of the local sample of white dwarfs is achieved if we assume that the initial binary fraction is ~ 50% and that the lowest mass white dwarfs (M < 0.3 Msun) cool faster than the most recently published cooling models predict. With this model we find a Galactic birth rate of close double white dwarfs of 0.05 yr^{-1}, a birth rate of AM CVn systems of 0.005 yr^{-1}, a merger rate of pairs with a combined mass exceeding the Chandrasekhar limit (which may be progenitors of SNe Ia) of 0.003 yr^{-1} and a formation rate of planetary nebulae of 1 yr^{-1}. We estimate the total number of double white dwarfs in the Galaxy as 2.5 10^8. In an observable sample with a limiting magnitude V_lim = 15 we predict the presence of ~855 white dwarfs of which ~220 are close pairs. Of these 10 are double CO white dwarfs of which one has a combined mass exceeding the Chandrasekhar limit and will merge within a Hubble time.
description: Accepted for publication in Astronomy & Astrophysics
Hypouricemic effect of sodium glucose transporter-2 inhibitors: a Network Meta-analysis and Meta-regression of Randomized Clinical Trials
Creators: name: Sridharan, Kannan
name: Alkhidir, Maya Mohammed Osman Hussein
Publisher: name: Taylor & Francis
Year: 2025
Subjects: Medicine
Chemical Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Science Policy

description: Sodium-glucose cotransporter-2 inhibitors (SGLT2is) are known for their cardiovascular benefits, but their impact on serum uric acid levels is not well understood. This study evaluates the hypouricemic effects of SGLT2is and their potential cardiovascular implications. A network meta-analysis was performed, including 56 studies (16,788 participants) contributing data to the meta-analysis. The effects of SGLT2is on serum uric acid levels were analyzed. Bootstrapped meta-analysis, trial sequential analysis, and meta-regression were utilized to validate the findings and assess the influence of covariates. The certainty of the evidence was evaluated. The analysis revealed that SGLT2is significantly reduced serum uric acid levels (WMD: -40.01 μmol/L). Specific reductions were noted for ertugliflozin (-42.17 μmol/L), dapagliflozin (-40.28 μmol/L), empagliflozin (-46.75 μmol/L), canagliflozin (-35.55 μmol/L), and ipragliflozin (-10.48 μmol/L). Both low and high doses were effective, with empagliflozin showing the highest efficacy. No significant associations were found with covariates. The evidence was of moderate certainty. SGLT2 inhibitors significantly lower serum uric acid levels, with empagliflozin being the most effective. These findings suggest a potential role in reducing cardiovascular risk. Further research is needed to explore their effects on hyperuricemic patients, and monitoring serum uric acid levels is recommended.
Topology determines force distributions in one-dimensional random spring networks
Creators: name: Heidemann, Knut M.
name: Sageman-Furnas, Andrew O.
name: Sharma, Abhinav
name: Rehfeldt, Florian
name: Schmidt, Christoph F.
name: Wardetzky, Max
Publisher: name: arXiv
Year: 2017
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Biological Physics (physics.bio-ph)
subject: FOS: Physical sciences

description: Networks of elastic fibers are ubiquitous in biological systems and often provide mechanical stability to cells and tissues. Fiber reinforced materials are also common in technology. An important characteristic of such materials is their resistance to failure under load. Rupture occurs when fibers break under excessive force and when that failure propagates. Therefore it is crucial to understand force distributions. Force distributions within such networks are typically highly inhomogeneous and are not well understood. Here we construct a simple one-dimensional model system with periodic boundary conditions by randomly placing linear springs on a circle. We consider ensembles of such networks that consist of $N$ nodes and have an average degree of connectivity $z$, but vary in topology. Using a graph-theoretical approach that accounts for the full topology of each network in the ensemble, we show that, surprisingly, the force distributions can be fully characterized in terms of the parameters $(N,z)$. Despite the universal properties of such $(N,z)$-ensembles, our analysis further reveals that a classical mean-field approach fails to capture force distributions correctly. We demonstrate that network topology is a crucial determinant of force distributions in elastic spring networks.
description: 13 pages, 7 figures. Missing labels added in Fig. 5. Reference fixed
Anaplastic thyroid carcinoma: interplay of predictive factors, treatment challenges, and survival insights
Creators: name: Ullah, Asad
name: Prasad, Kavita
name: Ahmed, Asim
name: Lee, Kue Tylor
name: Yasinzai, Abdul Qahar Khan
name: Iqbal, Asif
name: Sohail, Amir Humza
name: Arif, Dauod
name: Jogezai, Sana
name: Brandi, Luis
name: Karki, Nabin Raj
name: Khan, Marjan
name: Wali, Agha
name: Jain, Hritvik
name: Karim, Nagla Abdel
Publisher: name: Taylor & Francis
Year: 2025
Subjects: subject: Biotechnology
subject: Cancer
subject: Science Policy
subject: Plant Biology
subject: FOS: Biological sciences

description: Anaplastic thyroid carcinoma (ATC) is a rare and aggressive thyroid neoplasm. This study is the largest to date and aims to provide the most up-to-date analysis of demographics and clinicopathological factors of ATC. Data for this study were extracted from the Surveillance, Epidemiology, and End Results (SEER) database. A total of 1,769 cases of ATC were included with a median age at diagnosis was 71 years, and 59% were females. The most common site of metastasis was the lung (40.7%). The majority of patients underwent combination therapy (surgery with adjuvant chemoradiation) (19.2%). The 5-year OS was 7.3% (95% C.I. 6.6–8.0). The 5-year CSS was 11.8% (95% C.I. 10.8–12.8). The highest 5-year survival was observed with combination therapy (surgery with adjuvant chemoradiation) at 20.9%. Multivariable analysis revealed that age >60 years, Asian/Pacific Islander, >2 cm tumor size, and metastatic disease were independent risk factors. ATC is an uncommon tumor that mainly affects Caucasian females in their 70s. Older age, Asian/Pacific Islander race, and larger tumor size (>2 cm) were also associated with a worse prognosis. For better comprehension of pathogenesis, prospective clinical trials should include patients from all ethnicities, gender, and genomic analysis of ATC.
Kinetic Vlasov Simulations of collisionless magnetic Reconnection
Creators: name: Schmitz, H.
name: Grauer, R.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Plasma Physics (physics.plasm-ph)
subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences

description: A fully kinetic Vlasov simulation of the Geospace Environment Modeling (GEM) Magnetic Reconnection Challenge is presented. Good agreement is found with previous kinetic simulations using particle in cell (PIC) codes, confirming both the PIC and the Vlasov code. In the latter the complete distribution functions $f_k$ ($k=i,e$) are discretised on a numerical grid in phase space. In contrast to PIC simulations, the Vlasov code does not suffer from numerical noise and allows a more detailed investigation of the distribution functions. The role of the different contributions of Ohm's law are compared by calculating each of the terms from the moments of the $f_k$. The important role of the off--diagonal elements of the electron pressure tensor could be confirmed. The inductive electric field at the X--Line is found to be dominated by the non--gyrotropic electron pressure, while the bulk electron inertia is of minor importance. Detailed analysis of the electron distribution function within the diffusion region reveals the kinetic origin of the non--gyrotropic terms.
MOESM3 of In situ characterization of stem cells-like biomarkers in meningiomas
Creators: name: Alamir, Hanin
name: Alomari, Mona
name: Salwati, Abdulla
name: Saka, Mohamad
name: Bangash, Mohammed
name: Baeesa, Saleh
name: Alghamdi, Fahad
name: Carracedo, Angel
name: Hans-Juergen Schulten
name: Adeel Chaudhary
name: Abuzenadah, Adel
name: Hussein, Deema
Publisher: name: figshare
Year: 2018
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Additional file 3: Table S2. Differentially expressed cancer driver genes [66] in individual tumors compared with three normal brain sample data sets, referenced in Gene Expression Omnibus (GEO) submission GSE77259. Values were generated from previously published data sets [64, 65] using Transcriptome Analysis Console v. 4.0.
Fluctuations, dissipation, and nonuniversal superfluid jumps in two-dimensional superconductors
Creators: name: Crane, R. W.
name: Armitage, N. P.
name: Johansson, A.
name: Sambandamurthy, G.
name: Shahar, D.
name: Gruner, G.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: We report a comprehensive study of the complex AC conductivity of thin effectively 2D amorphous superconducting InO_x films at zero applied field. Below a temperature scale T_c0 where the superconducting order parameter amplitude becomes well defined, there is a temperature where both the generalized superfluid stiffness acquires a frequency dependence and the DC mangetoresistance becomes linear in field. We associate this with a transition of the Kosterlitz-Thouless-Berezinskii (KTB) type. At our measurement frequencies the superfluid stiffness at T_KTB is found to be larger than the universal value. Although this may be understood with a vortex dielectric constant of epsilon_v ~ 1.9 within the usual KTB theory, this is a relatively large value and indicates that such a system may be out of the domain of applicability of the low-fugacity (low vortex density) KTB treatment. This opens up the possibility that at least some of the discrepancy from a non-universal magnitude is intrinsic. Our finite frequency measurements allow us access to a number of other phenomena concerning the charge dynamics in superconducting thin films, including an enhanced conductivity near the amplitude fluctuation temperature T_c0 and a finite dissipation at low temperature which appears to be a universal aspect of highly disordered superconducting films.
description: 9 pages, 5 figures
Evolution of O Abundance Relative to Fe
Creators: name: Qian, Y. -Z.
name: Wasserburg, G. J.
Publisher: name: arXiv
Year: 2000
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present a three-component mixing model for the evolution of O abundance relative to Fe, taking into account the contributions of the first very massive (> 100 solar masses) stars formed from Big Bang debris. We show that the observations of O and Fe abundances in metal-poor stars in the Galaxy by Israelian et al. and Boesgaard et al. can be well represented both qualitatively and quantitatively by this model. Under the assumption of an initial Fe ([Fe/H] = -3) and O inventory due to the prompt production by the first very massive stars, the data at -3 < [Fe/H] < -1 are interpreted to result from the addition of O and Fe only from type II supernovae (SNII) to the prompt inventory. At [Fe/H] = -1, SNII still contribute O while both SNII and type Ia supernovae contribute Fe. During this later stage, (O/Fe) sharply drops off to an asymptotic value of 0.8(O/Fe)_sun. The value of (O/Fe) for the prompt inventory at [Fe/H] = -3 is found to be (O/Fe) = 20(O/Fe)_sun. This result suggests that protogalaxies with low ``metallicities'' should exhibit high values of (O/Fe). The C/O ratio produced by the first very massive stars is expected to be much less than 1 so that all the C should be tied up as CO and that C dust and hydrocarbon compounds should be quite rare at epochs corresponding to [Fe/H] < -3.
description: 25 pages, 8 postscript figures, to appear in ApJ
Additional file 2 of Global proteome profiling of human livers upon ischemia/reperfusion treatment
Creators: name: Cai, Haijian
name: Qi, Shunli
name: Yan, Qi
name: Ling, Jun
name: Du, Jian
name: Chen, Lijian
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified

description: Additional file 2: Table S2. Real-time PCR primers sequences.
Diplommatina abbreviata Heude 1890
Creators: name: Xie, Guang-Long
name: Zhang, Guoyi
name: Meng, Kaibaryer
name: Köhler, Frank
Publisher: name: Zenodo
Year: 2025
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Architaenioglossa
Diplommatinidae
Diplommatina
Diplommatina abbreviata

description: Diplommatina abbreviata Heude, 1890
Diplommatina abbreviata Heude, 1890: 131, pl. 36, fig. 21. – Yen, 1939: 32, pl. 2, fig. 51.
Type material.
Lectotype, HMT 232 a (Figs 5 A, 12 A), designated herein; six paralectotypes HMT 232 b, paralectotype USNM 472301, 5 paralectotypes MCZ 167234.
Type locality.
“ Tchen-kou, Szechwan ” [Chengkou, Chongqing City].
Brief description.
Shell dextral, with about 6 whorls. Protoconch smooth. Penultimate whorl slightly expanded, body whorls nearly as wide. Constriction at slight right of parietal wall. No spiral striation visible. Teleoconch with thin, widely-spaced, radial ribs; with ca. 6 ribs per 0.5 mm on penultimate whorl and ca. 5 ribs per 0.5 mm on body whorls. Dorsal fold absent. Umbilicus closed. No double lip. Columellar tooth present. One long horizontal palatalis just above columella. One short vertical palatalis.
Remarks.
The lectotype is designated herein in accordance with Art. 74 of the Code (ICZN 1999) for the stabilisation of the name. Johnson (1973) listed ‘ paratypes’ housed in USNM and MZC.
description: Published as part of Xie, Guang-Long, Zhang, Guoyi, Meng, Kaibaryer & Köhler, Frank, 2025, An illustrated type catalogue of Diplommatina Benson, 1849 from mainland China, with description of a new species, Diplommatina yipingica (Gastropoda, Cyclophoroidea), pp. 551-570 in Zoosystematics and Evolution 101 (2) on pages 551-570, DOI: 10.3897/zse.101.133434
Spin transport in Heisenberg antiferromagnets
Creators: name: Sentef, Michael
name: Kollar, Marcus
name: Kampf, Arno P.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We analyze spin transport in insulating antiferromagnets described by the XXZ Heisenberg model in two and three dimensions. Spin currents can be generated by a magnetic-field gradient or, in systems with spin-orbit coupling, perpendicular to a time-dependent electric field. The Kubo formula for the longitudinal spin conductivity is derived analogously to the Kubo formula for the optical conductivity of electronic systems. The spin conductivity is calculated within interacting spin-wave theory. In the Ising regime, the XXZ magnet is a spin insulator. For the isotropic Heisenberg model, the dimensionality of the system plays a crucial role: In d=3 the regular part of the spin conductivity vanishes linearly in the zero frequency limit, whereas in d=2 it approaches a finite zero frequency value.
description: 9 pages, 5 figures
Additional file 6: of polyClustR: defining communities of reconciled cancer subtypes with biological and prognostic significance
Creators: name: Eason, Katherine
name: Gift Nyamundanda
name: Anguraj Sadanandam
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Figure S6. Comparison of community classifications from each reconciliation method with known chromosomeÂ 3 ploidy statuses in uveal melanoma. (A-B) Heatmap showing hypergeometric test with overlap between the subtype communities (from polyClustR) and the known ploidy status from A) hypergeometric and B) PMI reconciliation methods. (PDF 53 kb)
Toward the analysis of JWST exoplanet spectra: Identifying troublesome model parameters
Creators: name: Baudino, Jean-Loup
name: Molliere, Paul
name: Venot, Olivia
name: Tremblin, Pascal
name: Bezard, Bruno
name: Lagage, Pierre-Olivier
Publisher: name: arXiv
Year: 2017
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: Given the forthcoming launch of the James Webb Space Telescope (JWST) which will allow observ- ing exoplanet atmospheres with unprecedented signal-over-noise ratio, spectral coverage and spatial resolution, the uncertainties in the atmosphere modelling used to interpret the data need to be as- sessed. As the first step, we compare three independent 1D radiative-convective models: ATMO, Exo-REM and petitCODE. We identify differences in physical and chemical processes taken into ac- count thanks to a benchmark protocol we developed. We study the impact of these differences on the analysis of observable spectra. We show the importance of selecting carefully relevant molecular linelists to compute the atmospheric opacity. Indeed, differences between spectra calculated with Hitran and ExoMol exceed the expected uncertainties of future JWST observations. We also show the limitation in the precision of the models due to uncertainties on alkali and molecule lineshape, which induce spectral effects also larger than the expected JWST uncertainties. We compare two chemical models, Exo-REM and Venot Chemical Code, which do not lead to significant differences in the emission or transmission spectra. We discuss the observational consequences of using equilibrium or out-of- equilibrium chemistry and the major impact of phosphine, detectable with the JWST.Each of the models has benefited from the benchmarking activity and has been updated. The protocol developed in this paper and the online results can constitute a test case for other models.
description: 36 pages, 30 figures, accepted by ApJ
MPEC 2024-N92 : 2024 NW1
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2024
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469
subject: 2024 NW1

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
title: ADCO, Cartulaire de Fontenay, second fragment (XIIIe siècle), Cart. 201 (15 H 9), folios 47-142, f. 022r
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2009
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: cartulaire

description: Cartulaire de Fontenay, second fragment (XIIIe siècle), Archives départementales de la Côte-d'Or, Cart. 201 (15 H 9), folios 47-142. Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire de Fontenay, second fragment (XIIIe siècle), Archives départementales de la Côte-d'Or, Cart. 201 (15 H 9), folios 47-142, f. 022r, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye de Fontenay
description: Provenance: http://www.wikidata.org/entity/Q464918
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb119679755
description: Provenance: https://www.geonames.org/7874015
description: Provenance: http://www.idref.fr/027691802/id
Additional file 2: of Patient-derived multicellular tumor spheroids towards optimized treatment for patients with hepatocellular carcinoma
Creators: name: Yeonhwa Song
name: Kim, Jin-Sun
name: Se-Hyuk Kim
name: Park, Yoon
name: Eunsil Yu
name: Ki-Hun Kim
name: Eul-Ju Seo
name: Heung-Bum Oh
name: Lee, Han
name: Kim, Kang
name: Seo, Haeng
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: Cancer

description: Figure S1. Wound healing assay of primary HCC cells. Wound healing assay. (A) A wound was introduced after cells reached 80-90% confluence. Cell migration was monitored under microscopy for the indicated time. Scale bar = 500 μm. (B) Cell growth was monitored for 7 days, and was quantitated of migration rate which is represented by % of control. Figure S2. Karyoviews of AMC-H1 and AMC-H2. The blue bar indicates gain, the red bar indicates loss, and the purple bar indicates LOH. Figure S3. Characterization of various primary HCC cells. (A) Capacity of various primary HCC to form tumor spheroids and MCTS. (B) Albumin and HepPar-1 immunostaining to examine the cellular origins of primary HCC cells. (C) AFP and albumin mRNA expression levels in primary HCC cells. (PDF 790 kb)
Vacuum polarization in muonic and antiprotonic atoms: the fine structure at medium Z
Creators: name: Korzinin, E. Yu.
name: Ivanov, V. G.
name: Karshenboim, S. G.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Atomic Physics (physics.atom-ph)
subject: FOS: Physical sciences

description: Effects of vacuum polarization modify the energy levels in atoms with an orbiting particle heavier than an electron. The dominant effect is due to the Uehling potential. In this paper we consider the relativistic corrections to the energy levels caused by the Uehling potential and in particular the fine structure in muonic and antiprotonic atoms. We derive general expressions and consider in detail specific regions of parameters which allow simple asymptotic expansion. We take into account the recoil effects and anomalous magnetic moment in the case of an antiproton as the orbiting particle.
Can dusty Lyman break galaxies produce the submillimeter counts and background? Lessons from lensed Lyman break galaxies
Creators: name: van der Werf, Paul P.
name: Knudsen, Kirsten Kraiberg
name: Labbe, Ivo
name: Franx, Marijn
Publisher: name: arXiv
Year: 2000
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Can the submillimeter counts and background be produced by applying a locally derived extinction correction to the population of Lyman break galaxies? We investigate the submillimeter emission of two strongly lensed Lyman break galaxies (MS1512+36-cB58 and MS1358+62-G1) and find that the procedure that is used to predict the submillimeter emission of the Lyman break galaxy population overpredicts the observed 850micron fluxes by up to a factor of 14. This result calls for caution in applying local correlations to distant galaxies. It also shows that large extinction corrections on Lyman break galaxies should be viewed with skepticism. It is concluded that the Lyman break galaxies may contribute to the submillimeter background at the 25 to 50% level. The brighter submillimeter galaxies making up the rest of the background are either not detected in optical surveys, or if they are detected, their submillimeter emission cannot be reliably estimated from their rest-frame ultraviolet properties.
description: 4 pages, 1 embedded postscript figure; to appear in proceedings of the UMass/INAOE conference on Deep Millimeter Surveys, eds. J. Lowenthal and D. Hughes; revised version corrects small numerical errors
Additional file 4 of Global proteome profiling of human livers upon ischemia/reperfusion treatment
Creators: name: Cai, Haijian
name: Qi, Shunli
name: Yan, Qi
name: Ling, Jun
name: Du, Jian
name: Chen, Lijian
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified

description: Additional file 4: Table S4. The peptides of the inclusion list in PRM assay.
How Software Development Group Leaders Influence Team Members Behavior
Creators: name: da Silva, Fabio Q. B.
name: Monteiro, Cleviton V. F.
name: Santos, Igor Ebrahim dos
name: Capretz, Luiz Fernando
Publisher: name: arXiv
Year: 2017
Subjects: subject: Computers and Society (cs.CY)
subject: FOS: Computer and information sciences

description: Evidence in the literature from several business sectors shows that exploratory and exploitative innovation strategies are complementarily important for competitiveness. Our empirical findings reinforced those evidences in the context of software development companies. The innovative behaviour of individuals is an essential ingredient to success in both types of innovations strategies and leaders can have a big influence on this behaviour. Adopting a leadership style that combines transactional and transformational practices is more likely to produce effective results in supporting innovative behaviour. In software development, project managers and other group leaders should be stimulated and supported in adopting such practices to create the conditions for innovative behaviour to thrive.
description: IEEE Press
Additional file 6: of Gut microbiota in experimental murine model of Graves’ orbitopathy established in different environments may modulate clinical presentation of disease
Creators: name: Masetti, Giulia
name: Sajad Moshkelgosha
name: Hedda-Luise Köhling
name: Covelli, Danila
name: Banga, Jasvinder
name: Berchner-Pfannschmidt, Utta
name: Horstmann, Mareike
name: Diaz-Cano, Salvador
name: Gina-Eva Goertz
name: Plummer, Sue
name: Eckstein, Anja
name: Ludgate, Marian
name: Biscarini, Filippo
name: Marchesi, Julian Roberto
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Medicine
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified

description: Figure S1. NMDS plot based on the weighted Unifrac distances of Center2 immune and control mice including TSHR-immunized mice from Center 1. TSHR-immunized mice from Center 1 were more similar to TSHR-immunized mice from Center 2 (P = 0.2) than to the βgal (P = 0.024) than the untreated (P = 0.04). (PDF 28 kb)
Low resistive edge contacts to CVD-grown graphene using a CMOS compatible metal
Creators: name: Shaygan, Mehrdad
name: Otto, Martin
name: Sagade, Abhay A.
name: Chavarin, Carlos A.
name: Bacher, Gerd
name: Mertin, Wolfgang
name: Neumaier, Daniel
Publisher: name: arXiv
Year: 2017
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Applied Physics (physics.app-ph)
subject: FOS: Physical sciences

description: The exploitation of the excellent intrinsic electronic properties of graphene for device applications is hampered by a large contact resistance between the metal and graphene. The formation of edge contacts rather than top contacts is one of the most promising solutions for realizing low ohmic contacts. In this paper the fabrication and characterization of edge contacts to large area CVD-grown monolayer graphene by means of optical lithography using CMOS compatible metals, i.e. Nickel and Aluminum is reported. Extraction of the contact resistance by Transfer Line Method (TLM) as well as the direct measurement using Kelvin Probe Force Microscopy demonstrates a very low width specific contact resistance.
Diplommatina (Sinica) apicina
Creators: name: Xie, Guang-Long
name: Zhang, Guoyi
name: Meng, Kaibaryer
name: Köhler, Frank
Publisher: name: Zenodo
Year: 2025
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Architaenioglossa
Diplommatinidae
Diplommatina
Diplommatina apicina

description: Diplommatina (Sinica) apicina (Gredler, 1885)
Moussonia apicina Gredler, 1885: 229–231.
Diplommatina (Sinica) apicina – Kobelt & Möllendorff, 1898: 139; Kobelt, 1902: 455; Zilch, 1953: 25.
Diplommatina apicina – Yen 1939: 31, pl. 2, fig. 40.
Type material.
Not seen.
Other material.
Eight non-type specimens SMF 39624 (Figs 5 B, 12 B).
Type locality.
“ Ta-hung-tung, Thien-heu-san, Kuei-tschen ” [Hunan Province], the current name of the locality cannot be confirmed.
Brief description.
Shell dextral. 7 Whorls. Penultimate and body whorls nearly equal in width. Teleoconch with thin, widely spaced, radial ribs; with ca. 7 ribs per 0.5 mm on penultimate whorl and ca. 5 ribs per 0.5 mm on body whorls. Double lip present. Columellar tooth present. One horizontal palatalis above columella. No vertical palatalis visible.
Remarks.
Kobelt and Möllendorff (1898) assigned this species to the subgenus Sinica. Yen (1939) and Zilch (1953) listed probable syntypes in the SMF; one figured by Yen (1939: pl. 2, fig. 40), However, discrepancies in the collection locality and collector in relation to the original description suggest that these specimens are non-type specimens. Further type specimens are likely kept in the Gredler collection in the Franziskanermuseum Bozen (see Zilch (1974)).
description: Published as part of Xie, Guang-Long, Zhang, Guoyi, Meng, Kaibaryer & Köhler, Frank, 2025, An illustrated type catalogue of Diplommatina Benson, 1849 from mainland China, with description of a new species, Diplommatina yipingica (Gastropoda, Cyclophoroidea), pp. 551-570 in Zoosystematics and Evolution 101 (2) on pages 551-570, DOI: 10.3897/zse.101.133434
High Energy Asymptotics of Multi--Colour QCD and Exactly Solvable Lattice Models
Creators: name: Lipatov, L. N.
Publisher: name: arXiv
Year: 1993
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The quantum inverse scattering method is applied to the solution of equations for wave functions of compound states of $n$ reggeized gluons in the multicolour QCD in a generalized leading logarithmic approximation.
description: 6 pages
Additional file 1 of HapSolo: an optimization approach for removing secondary haplotigs during diploid genome assembly and scaffolding
Creators: name: Solares, Edwin A.
name: Tao, Yuan
name: Long, Anthony D.
name: Gaut, Brandon S.
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1. Supplementary Tables and Figures.
Diplommatina (Sinica) confusa Heude 1885
Creators: name: Xie, Guang-Long
name: Zhang, Guoyi
name: Meng, Kaibaryer
name: Köhler, Frank
Publisher: name: Zenodo
Year: 2025
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Architaenioglossa
Diplommatinidae
Diplommatina
Diplommatina confusa

description: Diplommatina (Sinica) confusa Heude, 1885
Diplommatina confusa Heude, 1885: 97, pl. 24, figs 12, 12 a. – Yen, 1948: 75.
Diplommatina (Sinica) confusa – Kobelt & Möllendorff, 1898: 140; Kobelt, 1902: 460.
Type material.
Lectotype HMT 229 a (Figs 5 C, 12 C), designated herein; 33 paralectotypes HMT 229 b, paralectotype USNM 472304, nine paralectotypes MCZ 167034.
Type locality.
“ Tchen-K’eou ” [Chengkou, Chongqing City].
Brief description.
Shell dextral, with about 6 whorls. Protoconch smooth. Penultimate whorl slightly expanded, body whorls nearly as wide. Constriction at slightly right of parietal wall. No spiral striation visible. Teleoconch with thin, widely spaced, radial ribs, ca. 7 ribs per 0.5 mm on penultimate whorl, ca. 5 ribs per 0.5 mm on body whorl. Dorsal fold absent. Umbilicus closed. Double lip present. Columellar tooth present. One short horizontal palatalis just above columella. One vertical palatalis.
Remarks.
The lectotype is designated herein in accordance with Art. 74 of the Code (ICZN 1999) for the stabilisation of the name. Johnson (1973) listed ‘ paratypes’ housed in USNM and MZC. Kobelt and Möllendorff (1898) assigned this species to the subgenus Sinica. For HMT specimens, 33 specimens moved to D. (S.) setchuanensis by Dr. C. - C. Hwang, one specimen has been separated by Dr. C. - C. Hwang as form A (Figs 5 D, 12 D), another specimen as form B (Figs 5 E, 12 E). Both forms alleged to be distinct from D. confusa.
description: Published as part of Xie, Guang-Long, Zhang, Guoyi, Meng, Kaibaryer & Köhler, Frank, 2025, An illustrated type catalogue of Diplommatina Benson, 1849 from mainland China, with description of a new species, Diplommatina yipingica (Gastropoda, Cyclophoroidea), pp. 551-570 in Zoosystematics and Evolution 101 (2) on pages 551-570, DOI: 10.3897/zse.101.133434
Evolution of surface gravity waves over a submarine canyon
Creators: name: Magne, Rudy
name: Belibassakis, Kostas
name: Herbers, Thomas H. C.
name: Ardhuin, Fabrice
name: O'Reilly, William C.
name: Rey, Vincent
Publisher: name: arXiv
Year: 2006
Subjects: subject: Atmospheric and Oceanic Physics (physics.ao-ph)
subject: FOS: Physical sciences

description: The effects of a submarine canyon on the propagation of ocean surface waves are examined with a three-dimensional coupled-mode model for wave propagation over steep topography. Whereas the classical geometrical optics approximation predicts an abrupt transition from complete transmission at small incidence angles to no transmission at large angles, the full model predicts a more gradual transition with partial reflection/transmission that is sensitive to the canyon geometry and controlled by evanescent modes for small incidence angles and relatively short waves. Model results for large incidence angles are compared with data from directional wave buoys deployed around the rim and over Scripps Canyon, near San Diego, California, during the Nearshore Canyon Experiment (NCEX). Wave heights are observed to decay across the canyon by about a factor 5 over a distance shorter than a wavelength. Yet, a spectral refraction model predicts an even larger reduction by about a factor 10, because low frequency components cannot cross the canyon in the geometrical optics approximation. The coupled-mode model yields accurate results over and behind the canyon. These results show that although most of the wave energy is refractively trapped on the offshore rim of the canyon, a small fraction of the wave energy 'tunnels' across the canyon. Simplifications of the model that reduce it to the standard and modified mild slope equations also yield good results, indicating that evanescent modes and high order bottom slope effects are of minor importance for the energy transformation of waves propagating across depth contours at large oblique angles.
On quantum Gaussian optimizers conjecture in the case q=p
Creators: name: Holevo, A. S.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Mathematical Physics (math-ph)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The quantum Gaussian optimizers conjecture says that q-p norm of a Bosonic Gaussian channel is attained on "Gaussian" operators. Recently R.L. Frank and E.H. Lieb confirmed the hypothesis in the case q=p for gauge-covariant channels with arbitrary number of modes s [3]. In the present note we remark that in the case q=p our results in [6] and [9] in fact allow to prove the hypothesis for all Gaussian channels. Thus the condition of gauge covariance, rather crucial in the case q=1,s>1, plays no role in the case q=p.
description: 3 pages
Additional file 1: of Dihydroergotamine inhibits the vasodepressor sensory CGRPergic outflow by prejunctional activation of α2-adrenoceptors and 5-HT1 receptors
Creators: name: Abimael González-Hernández
name: Lozano-Cuenca, Jair
name: Marichal-Cancino, Bruno
name: MaassenVanDenBrink, Antoinette
name: Villalón, Carlos
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: Pharmacology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Hematology
subject: 110309 Infectious Diseases

description: Figure S1. Effect per se of i.v. bolus injections of: (a) saline (1 ml/kg); (b) rauwolscine (310 μg/kg); (c) GR127935 (31 μg/kg); or (d) haloperidol (310 μg/kg) given separately; as well as the combinations (e) rauwolscine plus GR127935 (310 and 31 μg/kg, respectively); (f) rauwolscine plus haloperidol (310 μg/kg each); or (g) GR127935 plus haloperidol (31 and 310 μg/kg, respectively) on the electrically-induced vasodepressor responses produced during an i.v. continuous infusion of methoxamine (20 μg/kg. min) (n = 5 for each group). No significant effects were produced after administration of compounds (P > 0.05). (PDF 881 kb)