cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Activated dynamics: an intermediate model between REM and p-spin
Creators: name: Baity-Jesi, Marco
name: Lustrac, Alexandre Achard-de
name: Biroli, Giulio
Publisher: name: arXiv
Year: 2018
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: In order to study the activated dynamics of mean-field glasses, which takes place on times of order exp(N), where N is the system size, we introduce a new model, the Correlated Random Energy Model (CREM), that allows for a smooth interpolation between the REM and the p-spin models. We study numerically and analytically the CREM in the intermediate regime between REM and p-spin. We fully characterize its energy landscape, which is like a golf-course but, at variance with the REM, has metabasins (or holes) containing several configurations. We find that an effective trap-like description for the dynamics emerges, provided that one identifies metabasins in the CREM with configurations in the trap model.
description: 7 pages, 2 figures
How did they rebuild London? (learning resource for primary schools, Key Stage 1: Great Fire of London)
Creators: name: Loveman, Kate
name: Harrod, James
Publisher: name: University of Leicester
Year: 2024
Subjects: History

description: This card sorting activity for primary school children provides a set of cards in groups of three: a cause of the Great Fire of London; the problem that resulted, and the solution that people found. 
Cards are shuffled and learners arrange them. It is designed to help learners build connections between causes, problems, and solutions. The activity accompanies the video 'How did they rebuild London?'

The activity was created by Kate Loveman and James Harrod for the Reimagining the Restoration project. It is part of a set of teaching resources on the Great Fire, first published on the Museum of London's website in 2023.
A Formal Account of Effectiveness Evaluation and Ranking Fusion
Creators: name: Amigó, Enrique
name: Giner, Fernando
name: Mizzaro, Stefano
name: Spina, Damiano
Publisher: name: arXiv
Year: 2018
Subjects: subject: Information Retrieval (cs.IR)
subject: FOS: Computer and information sciences
subject: H.3.3
subject: 68P20

description: This paper proposes a theoretical framework which models the information provided by retrieval systems in terms of Information Theory. The proposed framework allows to formalize: (i) system effectiveness as an information theoretic similarity between system outputs and human assessments, and (ii) ranking fusion as an information quantity measure. As a result, the proposed effectiveness metric improves popular metrics in terms of formal constraints. In addition, our empirical experiments suggest that it captures quality aspects from traditional metrics, while the reverse is not true. Our work also advances the understanding of theoretical foundations of the empirically known phenomenon of effectiveness increase when combining retrieval system outputs in an unsupervised manner.
description: ICTIR'18 paper, extended version with formal proofs (10 pages)
Thermoelectric efficiency of single-molecule junctions with long molecular linkers
Creators: name: Zimbovskaya, Natalya A.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We report results of theoretical studies of thermoelectric efficiency of single-molecule junctions with long molecular linkers. The linker is simulated by a chain of identical sites described using a tight-binding model. It is shown that thermoelectric figure of merit ZT strongly depends on the bridge length, being controlled by the lineshape of electron transmission function within the tunnel energy range corresponding to HOMO/LUMO transport channel. Using the adopted model we demonstrate that ZT may significantly increase as the linker lengthens, and that gateway states on the bridge (if any) may noticeably affect the length-dependent ZT. Temperature dependences of ZT for various bridge lengths are analyzed. It is shown that broad minima emerge in ZT versus temperature curves whose positions are controlled by the bridge lengths.
description: 6 pages, 5 figures
Deaf Londoners in the 1660s: Deaf Life Past and Present (learning resource)
Creators: name: Loveman, Kate
name: Harrod, James
Publisher: name: University of Leicester
Year: 2024
Subjects: History

description: This classroom activity features conversation cards to get children discussing how life for deaf people has changed since the 1660s. It is part of set of resources on 'Deaf Londoners in the 1660s'.

This activity was created by Kate Loveman and James Harrod for the Reimagining the Restoration project. The 'Deaf Londoners in the 1660s' teaching pack was first published on the Museum of London's website in 2023.
Additional file 4: of Struggling for a feasible tool – the process of implementing a clinical pathway in intensive care: a grounded theory study
Creators: name: Bjurling-Sjöberg, Petronella
name: Wadensten, Barbro
name: Pöder, Ulrika
name: Jansson, Inger
name: Nordgren, Lena
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Findings from the questionnaire. This file includes descriptive statistics from the questionnaire answered by staff in project phase four, about 1 year after implementation of the clinical pathway. (PDF 989 kb)
A pair of new isocoumarin enantiomers of Ludwigia hyssopifolia
Creators: name: Zhang, Jinyan
name: Liu, Chang
name: Lv, Yibing
name: Wei, Jianhua
name: Li, Bing
name: Liao, Guangfeng
name: Lu, Rumei
name: Yang, Xinzhou
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Biochemistry
subject: Pharmacology
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Hematology

description: A pair of new isocoumarin derivative enantiomers, (S)-(-)-3-(3,3-dichloro-2-hydroxy-propyl)-4-chlorine-6,8-dihydroxy-isochromen-1- one (1a) and (R)-(+)-3-(3,3-dichloro-2-hydroxy-propyl)-4-chlorine-6,8-dihydroxy-isochromen-1- one (1 b), as well as seven known compounds (2–8) were isolated from Ludwigia hyssopifolia. Compounds 1a and 1 b were confirmed to be a pair of enantiomers by chiral HPLC-CD analysis, and the structure of compound 1 was determined by spectroscopic analyses including extensive 1 D (1H NMR, 13C NMR) and 2 D NMR spectra (COSY, HSQC and HMBC) and MS data. And the absolute configurations of compounds 1a and 1 b were determined by the quantum chemical ECD calculations. Compounds 2–8 are firstly reported from this plant. In the in vitro assays, compounds 5 and 8 can inhibit human laryngeal cancer Hep-2 cell line growth in a dose- and time-dependent manner. In addition, compounds 2 and 4 have effects on increasing glucose uptake in vitro. Compound 2 showed a strong glucose uptake in L6 cells, with enhancements by 1.8 folds.
title: ADCO, Cartulaire de l'abbaye de Cîteaux dit Cartulare Antiquum t.2 (2e moitié XIIIe siècle), Cart. 167 (11 H 67), f. 0065v
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2010
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: cartulaire

description: Cartulaire de l'abbaye de Cîteaux dit Cartulare Antiquum t.2 (2e moitié XIIIe siècle), Archives départementales de la Côte-d'Or, Cart. 167 (11 H 67), f. 0065v, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire de l'abbaye de Cîteaux dit Cartulare Antiquum t.2 (2e moitié XIIIe siècle), Archives départementales de la Côte-d'Or, Cart. 167 (11 H 67), f. 0065v, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
Neutron-star spindown and magnetic inclination-angle evolution
Creators: name: Lander, S. K.
name: Jones, D. I.
Publisher: name: arXiv
Year: 2018
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: A rotating fluid star, endowed with a magnetic field, can undergo a form of precessional motion: a sum of rigid-body free precession and a non-rigid response. On secular timescales this motion is dissipated by bulk and shear viscous processes in the stellar interior and magnetospheric braking in the exterior, changing the inclination angle between the rotation and magnetic axes. Using our recent solutions for the non-rigid precessional dynamics, and viscous dissipation integrals derived in this paper, we make the only self-consistent calculation to date of these dissipation rates. We present the first results for the full coupled evolution of spindown and inclination angle for a model of a late-stage proto-neutron star with a strong toroidal magnetic field, allowing for both electromagnetic torques and internal dissipation when evolving the inclination angle. We explore this coupled evolution for a range of initial inclination angles, rotation rates and magnetic field strengths. For fixed initial inclination angle, our results indicate that the neutron-star population naturally evolves into two classes: near-aligned and near-orthogonal rotators -- with typical pulsars falling into the latter category. Millisecond magnetars can evolve into the near-aligned rotators which mature magnetars appear to be, but only for small initial inclination angle and internal toroidal fields stronger than roughly $5\times 10^{15}$ G. Once any model has evolved to either an aligned or orthogonal state, there appears to be no further evolution away from this state at later times.
description: 27 pages, 18 figures. Very minor changes from v1; accepted for publication in MNRAS
Rings in Fireball Afterglows
Creators: name: Panaitescu, A.
name: Meszaros, P.
Publisher: name: arXiv
Year: 1997
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We derive the equation for the surface of equal arrival times of radiation from a thin relativistic shell interacting with an external medium, representing the afterglow of a gamma-ray burst produced by a fireball. Due to the deceleration, these surfaces become distorted ellipsoids and, at sufficiently late times, most of the light (either bolometric or in a given band) comes from a ring-like region whose width depends only on age. We analyze the shape of these surfaces and the radiation received from different angles for different dynamic and radiative regimes and homogeneous or power-law external densities. We calculate angle-integrated bolometric and fixed frequency fluxes, and we tabulate the most relevant parameters that describe the equal arrival time surfaces and the source brightness distribution, quantities that are useful for more accurate analytic estimates of the afterglow evolution.
description: Ap.J.(Letters), subm. 9/28/97, latex (aaspp4), 11 pages including two postscript figures
Additional file 3: of Struggling for a feasible tool – the process of implementing a clinical pathway in intensive care: a grounded theory study
Creators: name: Bjurling-Sjöberg, Petronella
name: Wadensten, Barbro
name: Pöder, Ulrika
name: Jansson, Inger
name: Nordgren, Lena
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Examples of quotes from participants. This file includes some examples of quotes (translated from Swedish to English) that indicate the categories and included subcategories in the conceptual model presented in the results section of this paper. (PDF 724 kb)
title: Jahresbericht 2009 / KDEE
Creators: name: (:Unkn) Unknown
Publisher: name: Universität Kassel
Year: 2010
Subjects: subject: 333
subject: 350
subject: 600
subject: Jahresbericht
subject: Universität Kassel. Kompetenzzentrum für Dezentrale Elektrische Energieversorgungstechnik

description: Das Kompetenzzentrum für Dezentrale Elektrische Energieversorgungstechnik (KDEE) befasst sich mit geräteorientierter Energiesystemtechnik für die Nutzung erneuerbarer Energien mit besonderem Schwerpunkt bei der Stromrichtertechnik in Hybridsystemen, im Verteilnetz und bei dezentraler Energiewandlung sowie in mobilen Energieversorgungssystemen.
A Blockchain-based Flight Data Recorder for Cloud Accountability
Creators: name: D'Angelo, Gabriele
name: Ferretti, Stefano
name: Marzolla, Moreno
Publisher: name: arXiv
Year: 2018
Subjects: subject: Distributed, Parallel, and Cluster Computing (cs.DC)
subject: Cryptography and Security (cs.CR)
subject: FOS: Computer and information sciences

description: Many companies rely on Cloud infrastructures for their computation, communication and data storage requirements. While Cloud services provide some benefits, e.g., replacing high upfront costs for an IT infrastructure with a pay-as-you-go model, they also introduce serious concerns that are notoriously difficult to address. In essence, Cloud customers are storing data and running computations on infrastructures that they can not control directly. Therefore, when problems arise -- violations of Service Level Agreements, data corruption, data leakage, security breaches -- both customers and Cloud providers face the challenge of agreeing on which party is to be held responsible. In this paper, we review the challenges and requirements for enforcing accountability in Cloud infrastructures, and argue that smart contracts and blockchain technologies might provide a key contribution towards accountable Clouds.
description: 1st Workshop on Cryptocurrencies and Blockchains for Distributed Systems (CryBlock 2018)
Nicotinamide N‑methyltransferase (NNMT) regulates the glucocorticoid signaling pathway during
Creators: name: Annalisa Roberti
name: Juan Ramon Tejedor
name: Irene Díaz‑Moreno
name: Virginia López
name: Pablo Santamarina‑Ojeda
name: Raúl F. Pérez
name: Rocío G. Urdinguio
name: Carmen Concellón
name: María Luz Martínez‑Chantar
name: Juan Luis Fernández‑Morera
name: Antonio Díaz‑Quintana
name: Vicente del Amo
name: Agustín F. Fernández
name: Mario F. Fraga
Publisher: name: Zenodo
Year: 2023

description: Obesity is associated with adipose tissue dysfunction through the differentiation and expansion
of pre-adipocytes to adipocytes (hyperplasia) and/or increases in size of pre-existing adipocytes
(hypertrophy). A cascade of transcriptional events coordinates the differentiation of preadipocytes
into fully differentiated adipocytes; the process of adipogenesis. Although nicotinamide
N-methyltransferase (NNMT) has been associated with obesity, how NNMT is regulated during
adipogenesis, and the underlying regulatory mechanisms, remain undefined. In present study we
used genetic and pharmacological approaches to elucidate the molecular signals driving NNMT
activation and its role during adipogenesis. Firstly, we demonstrated that during the early phase of
adipocyte differentiation NNMT is transactivated by CCAAT/Enhancer Binding Protein beta (CEBPB)
in response to glucocorticoid (GC) induction. We found that Nnmt knockout, using CRISPR/Cas9
approach, impaired terminal adipogenesis by influencing the timing of cellular commitment and cell
cycle exit during mitotic clonal expansion, as demonstrated by cell cycle analysis and RNA sequencing
experiments. Biochemical and computational methods showed that a novel small molecule, called
CC-410, stably binds to and highly specifically inhibits NNMT. CC-410 was, therefore, used to modulate
protein activity during pre-adipocyte differentiation stages, demonstrating that, in line with the
genetic approach, chemical inhibition of NNMT at the early stages of adipogenesis impairs terminal
differentiation by deregulating the GC network. These congruent results conclusively demonstrate
that NNMT is a key component of the GC-CEBP axis during the early stages of adipogenesis and could
be a potential therapeutic target for both early-onset obesity and glucocorticoid-induced obesity.
Large $R$-parity Violating Couplings and Grand Unification
Creators: name: Smirnov, Alexei Yu.
name: Vissani, Francesco
Publisher: name: arXiv
Year: 1995
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We consider a possibility that $R$-parity violating interactions of particles which do not involve the first generation have large (up to 1) coupling constants, $Λ$. Such couplings, if exist, could have a number of phenomenological consequences: renormalization of $b-τ$ mass ratio, generation of $ν_τ$ mass in MeV region, {\em etc.}. In Grand Unified models, where $B$- and $L$-violating couplings appear simultaneously, the proton decay can be forbidden in virtue of hierarchical flavor structure of $Λ.$ However, due to Cabibbo-Kobayashi-Maskawa mixing this decay is induced already in one-loop. Present experimental data give the upper bound $Λ\ltap 10^{-8}$ (or $|λ' λ''| \ltap 7\cdot 10^{-16},$ on products of certain $L$- and $B$-violating coupling constants, in more general context). The bound can be avoided, if there is an asymmetry between the $L$- and $B$-violating couplings of usual matter fields. In the $SU(5)$ model the asymmetry can be related to the doublet-triplet splitting.
description: Version published after revision. A discussion of the pattern of the sneutrino vacuum expectation values has been added
Dynamic strain in gold nanoparticle supported graphene induced by focused laser irradiation
Creators: name: Pálinkás, András
name: Kun, Péter
name: Koós, Antal A.
name: Osváth, Zoltán
Publisher: name: arXiv
Year: 2018
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Graphene on noble-metal nanostructures constitutes an attractive nanocomposite with possible applications in sensors or energy conversion. In this work we study the properties of hybrid graphene/gold nanoparticle structures by Raman spectroscopy and Scanning Probe Methods. The nanoparticles (NPs) were prepared by local annealing of gold thin films using focused laser beam. The method resulted in a patterned surface, with NPs formed at arbitrarily chosen microscale areas. Graphene grown by chemical vapour deposition was transferred onto the prepared, closely spaced gold NPs. While we found that successive higher intensity (6 mW) laser irradiation increased gradually the doping and the defect concentration in SiO2 supported graphene, the same irradiation procedure did not induce such irreversible effects in the graphene supported by gold NPs. Moreover, the laser irradiation induced dynamic hydrostatic strain in the graphene on Au NPs, which turned out to be completely reversible. These results can have implications in the development of graphene/plasmonic nanoparticle based high temperature sensors operating in dynamic regimes.
description: 18 pages, 5 figures
Additional file 3 of GsMATE encoding a multidrug and toxic compound extrusion transporter enhances aluminum tolerance in Arabidopsis thaliana
Creators: name: Ma, Qibin
name: Yi, Rong
name: Li, Lu
name: Liang, Zhongyi
name: Zeng, Tingting
name: Zhang, Yu
name: Huang, He
name: Zhang, Xiao
name: Yin, Xiangli
name: Cai, Zhandong
name: Mu, Yinghui
name: Cheng, Yanbo
name: Zeng, Qiaoying
name: Li, Xiuping
name: Nian, Hai
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: Chemical Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Putative domains and TMs of GsMATE protein. (DOCX 702 kb)
Explicit N=2 supersymmetry for higher-spin massless fields in D=4 AdS superspace
Creators: name: Segal, A. Yu.
name: Sibiryakov, A. G.
Publisher: name: arXiv
Year: 1999
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We develop two N=2 superfield formulations of free equations of motion for the joint model of all D=4 massless higher-superspin fields in generating form. The explicit Osp(2|4) supersymmetry is achieved without exploiting the harmonic superspace, and with adding no auxiliary component fields to those of N=1 superfields. The formulations are developed in two different Osp(2|4) homogeneous superspaces which have a structure of a fibre bundle over the standard D=4 AdS superspace, with dimensions (7|4) and (7|8). The N=2 covariant derivatives in these spaces are expressed in terms of N=1 ones which gives simple rules for component analysis.
description: 43 pages, LaTeX, numerical factors in Eqs.(2.18,34) were corrected
Additional file 2: of Expression signatures of exosomal long non-coding RNAs in urine serve as novel non-invasive biomarkers for diagnosis and recurrence prediction of bladder cancer
Creators: name: Zhan, Yao
name: Du, Lutao
name: Wang, Lishui
name: Jiang, Xiumei
name: Zhang, Shujun
name: Li, Juan
name: Yan, Keqiang
name: Duan, Weili
name: Zhao, Yinghui
name: Wang, Lili
name: Wang, Yunshan
name: Wang, Chuanxin
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Virology

description: Table S1. Characteristics of the study population in the training set and the validation set. (DOCX 17 kb)
On the structure of diffuse measures for parabolic capacities
Creators: name: Klimsiak, Tomasz
name: Rozkosz, Andrzej
Publisher: name: arXiv
Year: 2018
Subjects: subject: Analysis of PDEs (math.AP)
subject: FOS: Mathematics

description: Let $Q=(0,T)\timesΩ$, where $Ω$ is a bounded open subset of $\mathbb{R}^d$. We consider the parabolic $p$-capacity on $Q$ naturally associated with the usual $p$-Laplacian. Droniou, Porretta and Prignet have shown that if a bounded Radon measure $μ$ on $Q$ is diffuse, i.e. charges no set of zero $p$-capacity, $p>1$, then it is of the form $μ=f+\mbox{div}(G)+g_t$ for some $f\in L^1(Q)$, $G\in (L^{p'}(Q))^d$ and $g\in L^p(0,T;W^{1,p}_0(Ω)\cap L^2(Ω))$. We show the converse of this result: if $p>1$, then each bounded Radon measure $μ$ on $Q$ admitting such a decomposition is diffuse.
Clinical prognostic risk analysis and progression factor exploration of primary breast lymphoma
Creators: name: Deng, Jili
name: Mi, Lan
name: Wang, Xiaopei
name: Zhu, Jun
name: Zhang, Chen
name: Song, Yuqin
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Medicine
subject: Cell Biology
subject: Biotechnology
subject: Cancer
subject: Hematology
subject: Plant Biology
subject: FOS: Biological sciences

description: : A primary breast lymphomais a rare form of extranodal lymphoma type. We aimed to analyze prognosticriskfactors and explore relapse factors in primary breast diffuse large B cell lymphoma (PB-DLBCL). : From November 2003 to September 2020, sixty-three patients from two medical centers newly diagnosed with PB-DLBCL patients were analyzed retrospectively. : The median age was 52, and >50% of patients were post-menopausal. The international prognostics index (IPI) (0–1) was mainlyin the low-risk group (84%), and there were four patients with stage IV (6%) who had bilateral breast involvement. With a median follow-up time of 4.92 years (3.17–8.00), five-year overall survival (OS) and progression-free survival (PFS) were 78.9% and 67.1%, respectively. Univariate and multivariate analyses showed that elevated erythrocyte sedimentation rate (ESR) and B symptoms were independent adverse prognostic risk factors for OS, whereas bilateral breast involvement was unfavorable for PFS. Disease recurrence and relapse occurred in 40% (25/63) patients, mainly in the breast, followed by the central nervous system (CNS) and skin/soft tissue. : This is the first study to explore the prognostic risk factors and relapse factorsof PB-DLBCL in a relatively large Chinese PBL cohort. Local breast and CNS recurrence after standard R-CHOP treatment were the main issues we are facing now.
MOESM4 of Detection of copy number variations in brown and white layers based on genotyping panels with different densities
Creators: name: Wioleta Drobik-Czwarno
name: Wolc, Anna
name: Fulton, Janet
name: Dekkers, Jack
Publisher: name: figshare
Year: 2018
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 4: Figure S1. Duplication on chromosome 1 of 179.8 Mb, which overlaps with the gene ALKBH8 and segregates in line W1. Coverage plot from Golden Helix Genome Browse for CNVR and neighboring regions. Figure S2. Duplication on chromosome 2 of 129.1 Mb, which overlaps with the BAALC and FZD6 genes and segregates in line B1. Coverage plot from Golden Helix Genome Browse for CNVR and neighboring regions. Figure S3. Complex CNV region on chromosome 4 of 61.8 Mb that segregates in white lines. Coverage plot from Golden Helix Genome Browse for CNVR and neighboring regions. Figure S4. Complex CNV region on chromosome 5 of 0.1 Mb that segregates in line B1. Coverage plot from Golden Helix Genome Browse for CNVR and neighboring regions. Figure S5. Deletion on chromosome 5 of 19.6 Mb that segregates within the white lines W1 and W2. Coverage plot from Golden Helix Genome Browse for CNVR and neighboring regions. Figure S6. Deletion on chromosome 9 of 1.9 Mb that segregates within line B1. Coverage plot from Golden Helix Genome Browse for CNVR and neighboring regions. Figure S7. Complex CNV region on chromosome 12 of 2.0 Mb that overlaps with the DOCK3 gene and segregates within line B1 and W1. The duplication segregates in line B1 while the deletion segregates in line W1. Coverage plot from Golden Helix Genome Browse for CNVR and neighboring regions. Figure S8. Deletion on chromosome 23 of 2.5 Mb that overlaps with the EPB41 gene and segregates within line B1. Coverage plot from Golden Helix Genome Browse for CNVR and neighboring regions.
Additional file 2 of Gender differences in quality of life among patients with myasthenia gravis in China
Creators: name: Dong, Dong
name: Chong, Marc Ka-chun
name: Wu, Yushan
name: Kaminski, Henry
name: Cutter, Gary
name: Xu, Xianhao
name: Li, Haifeng
name: Zhao, Chongbo
name: Yin, Jian
name: Yu, Siyue
name: Zhu, Jianfeng
Publisher: name: figshare
Year: 2020
Subjects: Medicine
Neuroscience
Science Policy
Mental Health

description: Additional file 2: Figure S1. Mean values of individual item in MG-QOL15r compared by gender.
Noncommutative Compactifications of Type I Strings on Tori with Magnetic Background Flux
Creators: name: Blumenhagen, Ralph
name: Goerlich, Lars
name: Kors, Boris
name: Lust, Dieter
Publisher: name: arXiv
Year: 2000
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We construct six- and four-dimensional toroidal compactifications of the Type I string with magnetic flux on the D-branes. The open strings in this background probe a noncommutative internal geometry. Phenomenologically appealing features such as chiral fermions and supersymmetry breaking in the gauge sector are naturally realized by these vacua. We investigate the spectra of such noncommutative string compactifications and in a bottom-up approach discuss the possibility to obtain the standard or some GUT like model.
description: TeX harvmac, 25 pages, 5 figures
title: ADCO, Cartulaire de l'abbaye de Cîteaux dit Cartulare Antiquum t.1 (début XIIIe siècle), Cart. 166 (11 H 64), 136 folios, f. 0048r
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Chartes de la Bourgogne du Moyen Âge
subject: cartulaire
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi

description: Cartulaire de l'abbaye de Cîteaux dit Cartulare Antiquum t.1 (début XIIIe siècle), Archives départementales de la Côte-d'Or, Cart. 166 (11 H 64), 136 folios, f. 0048r, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire de l'abbaye de Cîteaux dit Cartulare Antiquum t.1 (début XIIIe siècle), Archives départementales de la Côte-d'Or, Cart. 166 (11 H 64), 136 folios, f. 0048r, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
Gauge Invariance and Unstable Particles
Creators: name: Papavassiliou, Joannis
name: Pilaftsis, Apostolos
Publisher: name: arXiv
Year: 1995
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: A gauge-independent approach to resonant transition amplitudes with nonconserved external currents is presented, which is implemented by the pinch technique. The analytic expressions derived with this method are $U(1)_{em}$ invariant, independent of the choice of the gauge-fixing parameter, and satisfy a number of required theoretical properties, including unitarity. Although special attention is paid to resonant scatterings involving the $γWW$ and $ZWW$ vertices in the minimal Standard Model, our approach can be extended to the top quark or other unstable particles appearing in renormalizable models of new physics.
description: 14 pages, LaTeX (3 figures)
Double-Dipping: A New Relation between Stellar Rotation and Starspot Activity
Creators: name: Basri, Gibor
name: Nguyen, Hieu T.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: We report the discovery of a new relationship between a simple morphological characteristic of light curves produced by starspots and stellar rotation periods. The characteristic we examine is whether the light curve exhibits one dip or two during a single rotation. We analyze thousands of Kepler light curves of main sequence stars from 3200-6200K. Almost all the stars exhibit segments of their light curve that contain either single or double dip segments (very few have more than two significant dips per rotation). We define a variable, the "single/double ratio" (SDR) that expresses the ratio of the time spent in single mode to the time spent in double mode. Unexpectedly, there is a strong relationship between the SDR and the stellar rotation period, in the sense that longer periods come with a larger fraction of double segments. Even more unexpectedly, the slopes of the SDR-Period relations are a clear function of stellar temperature. We also show that the relationships of spot variability amplitude (R_var) to rotation period have similar levels of scatter, slopes, and dependence on temperature as the SDR-Period relations. Finally, the median R_var of single segments tends to be about twice that of double segments in a given light curve. We offer some tentative interpretations of these new results in terms of starspot coverage and lifetimes. It will be fruitful to look further into this novel "rotation-activity" relation, and better understand what information these aspects of light curve morphology bring to our knowledge of stellar magnetic activity.
description: 34 pages, 10 figures. Submitted to the Astronomical Journal
Duality between simple-group gauge theories and some applications
Creators: name: Hirayama, Takayuki
name: Yoshioka, Koichi
Publisher: name: arXiv
Year: 1998
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: In this paper we investigate N=1 supersymmetric gauge theories with a product gauge group. By using smoothly confining dynamics, we can find new dualities which include higher-rank tensor fields, and in which the dual gauge group is simple, not a product. Some of them are dualities between chiral and non-chiral gauge theories. We also discuss some applications to dynamical supersymmetry breaking phenomena and new confining theories with a tree-level superpotential.
description: 33 pages, LaTeX, references added, version to appear in PRD
Additional file 2: of Struggling for a feasible tool – the process of implementing a clinical pathway in intensive care: a grounded theory study
Creators: name: Bjurling-Sjöberg, Petronella
name: Wadensten, Barbro
name: Pöder, Ulrika
name: Jansson, Inger
name: Nordgren, Lena
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Science Policy

description: Content of the questionnaire. This file includes the questions included in the questionnaire answered by staff in project phase four (translated from Swedish to English). (PDF 899 kb)
title: Advies Scheldebrug: deelrapport 1. Stroming en morfologie
Creators: name: De Maerschalck, Bart
name: Eloot, Katrien
name: Plancke, Yves
name: Mostaert, Frank
Publisher: name: Flanders Hydraulics
Year: 2019

description: Title : WL Rapporten. Waterbouwkundig Laboratorium: Antwerpen.
Volume : 18_120_1
Issue :
Pagination : 19 + 12 p. bijl.
Probing modified gravity in cosmic filaments
Creators: name: Ho, Alex
name: Gronke, Max
name: Falck, Bridget
name: Mota, David F.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: Multiple modifications of general relativity (GR) have been proposed in the literature in order to understand the nature of the accelerated expansion of the Universe. However, thus far all the predictions of GR have been confirmed with constantly increasing accuracy. In this work, we study the imprints of a particular class of models -- "screened" modified gravity theories -- on cosmic filaments. We have utilized the $N$-body code ISIS/RAMSES to simulate the symmetron model and the Hu-Sawicky $f(R)$ model, and we post-process the output with DisPerSE to identify the filaments of the cosmic web. We investigated how the global properties of the filaments -- such as their lengths, masses, and thicknesses -- as well as their radial density and speed profiles change under different gravity theories. We find that filaments are, on average, shorter and denser in modified gravity models compared to in $Λ$CDM. We also find that the speed profiles of the filaments are enhanced, consistent with theoretical expectations. Overall, our results suggest that cosmic filaments can be an effective complementary probe of screened modified gravity theories on Mpc scales.
description: 11 pages, 17 figures, accepted by A&A
Early Seizure Detection with an Energy-Efficient Convolutional Neural Network on an Implantable Microcontroller
Creators: name: Hügle, Maria
name: Heller, Simon
name: Watter, Manuel
name: Blum, Manuel
name: Manzouri, Farrokh
name: Dümpelmann, Matthias
name: Schulze-Bonhage, Andreas
name: Woias, Peter
name: Boedecker, Joschka
Publisher: name: arXiv
Year: 2018
Subjects: subject: Machine Learning (stat.ML)
subject: Machine Learning (cs.LG)
subject: Applications (stat.AP)
subject: FOS: Computer and information sciences

description: Implantable, closed-loop devices for automated early detection and stimulation of epileptic seizures are promising treatment options for patients with severe epilepsy that cannot be treated with traditional means. Most approaches for early seizure detection in the literature are, however, not optimized for implementation on ultra-low power microcontrollers required for long-term implantation. In this paper we present a convolutional neural network for the early detection of seizures from intracranial EEG signals, designed specifically for this purpose. In addition, we investigate approximations to comply with hardware limits while preserving accuracy. We compare our approach to three previously proposed convolutional neural networks and a feature-based SVM classifier with respect to detection accuracy, latency and computational needs. Evaluation is based on a comprehensive database with long-term EEG recordings. The proposed method outperforms the other detectors with a median sensitivity of 0.96, false detection rate of 10.1 per hour and median detection delay of 3.7 seconds, while being the only approach suited to be realized on a low power microcontroller due to its parsimonious use of computational and memory resources.
description: Accepted at IJCNN 2018
Additional file 1: of Struggling for a feasible tool – the process of implementing a clinical pathway in intensive care: a grounded theory study
Creators: name: Bjurling-Sjöberg, Petronella
name: Wadensten, Barbro
name: Pöder, Ulrika
name: Jansson, Inger
name: Nordgren, Lena
Publisher: name: figshare
Year: 2018
Subjects: subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Science Policy
subject: Computational Biology

description: List of topics/questions in the focus groups and individual interviews. This file includes the semi-structured interview guides used in the focus groups and individual interviews (translated from Swedish to English). (PDF 711 kb)
Additional file 1 of Distribution of under-5 deaths in the neonatal, postneonatal, and childhood periods: a multicountry analysis in 64 low- and middle-income countries
Creators: name: Li, Zhihui
name: Karlsson, Omar
name: Kim, Rockli
name: Subramanian, S. V.
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 1: Table 1. Share of neonatal, postneonatal, and childhood to total under-5 deaths. Table 2. Share of neonatal, postneonatal, and childhood to total under-5 deaths at aggregate-level, latest survey rounds between 2008 and 2018. Table 3. Share of neonatal, postneonatal, and childhood to total under-5 deaths at aggregate-level including the countries with 0 recorded deaths in any period of life, latest survey rounds. Table 4. Change in share of neonatal to total under-5 deaths. Table 5. Change in share of postneonatal to total under-5 deaths. Table 6. Change in share of childhood to total under-5 deaths.
Stable non-BPS D-branes in Type I string theory
Creators: name: Frau, M.
name: Gallot, L.
name: Lerda, A.
name: Strigazzi, P.
Publisher: name: arXiv
Year: 1999
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We use the boundary state formalism to study, from the closed string point of view, superpositions of branes and anti-branes which are relevant in some non-perturbative string dualities. Treating the tachyon instability of these systems as proposed by A. Sen, we show how to incorporate the effects of the tachyon condensation directly in the boundary state. In this way we manage to show explicitly that the D1 -- anti-D1 pair of Type I is a stable non-BPS D-particle, and compute its mass. We also generalize this construction to describe other non-BPS D-branes of Type I. By requiring the absence of tachyons in the open string spectrum, we find which configurations are stable and compute their tensions. Our classification is in complete agreement with the results recently obtained using the K-theory of space-time.
description: 31 pages, plain LaTeX, final version to be published in Nucl. Phys. B
MOESM1 of Detection of copy number variations in brown and white layers based on genotyping panels with different densities
Creators: name: Wioleta Drobik-Czwarno
name: Wolc, Anna
name: Fulton, Janet
name: Dekkers, Jack
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Additional file 1: Table S1. Summary of CNVR with a frequency higher than 5% within at least one line based on the 600K panel. The data provided represent details for 19 CNVR with a frequency higher than 5% detected on the 600K panel. For each CNVR location, line of origin, type, frequency, overlap with the previous studies, confirmation from sequence (yes or no) and overlapping genes are provided.
Frictional Effects on RNA Folding: Speed Limit and Kramers Turnover
Creators: name: Hori, Naoto
name: Denesyuk, Natalia A.
name: Thirumalai, D.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Biomolecules (q-bio.BM)
subject: Soft Condensed Matter (cond-mat.soft)
subject: Biological Physics (physics.bio-ph)
subject: FOS: Biological sciences
subject: FOS: Physical sciences

description: We investigated frictional effects on the folding rates of a human telomerase hairpin (hTR HP) and H-type pseudoknot from the Beet Western Yellow Virus (BWYV PK) using simulations of the Three Interaction Site (TIS) model for RNA. The heat capacity from TIS model simulations, calculated using temperature replica exchange simulations, reproduces nearly quantitatively the available experimental data for the hTR HP. The corresponding results for BWYV PK serve as predictions. We calculated the folding rates ($k_\mathrm{F}$) from more than 100 folding trajectories for each value of the solvent viscosity ($η$) at a fixed salt concentration of 200 mM. By using the theoretical estimate ($\propto$$\sqrt{N}$ where $N$ is the number of nucleotides) for folding free energy barrier, $k_\mathrm{F}$ data for both the RNAs are quantitatively fit using one-dimensional Kramers' theory with two parameters specifying the curvatures in the unfolded basin and the barrier top. In the high-friction regime ($η\gtrsim10^{-5}\,\textrm{Pa\ensuremath{\cdot}s}$), for both HP and PK, $k_\mathrm{F}$s decrease as $1/η$ whereas in the low friction regime, $k_\mathrm{F}$ values increase as $η$ increases, leading to a maximum folding rate at a moderate viscosity ($\sim10^{-6}\,\textrm{Pa\ensuremath{\cdot}s}$), which is the Kramers turnover. From the fits, we find that the speed limit to RNA folding at water viscosity is between 1 and 4 $\mathrm{μs}$, which is in accord with our previous theoretical prediction as well as results from several single molecule experiments. Both the RNA constructs fold by parallel pathways. Surprisingly, we find that the flux through the pathways could be altered by changing solvent viscosity, a prediction that is more easily testable in RNA than in proteins.
Interconnections between type II superstrings, M theory and N=4 supersymmetric Yang--Mills
Creators: name: Green, Michael B.
Publisher: name: arXiv
Year: 1999
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: These lecture notes begin with a review of the first nonleading contributions to the derivative expansion of the M theory effective action compactified on a two-torus. The form of these higher-derivative interactions is shown to follow from ten-dimensional type IIB supersymmetry as well as from one-loop quantum corrections to classical eleven-dimensional supergravity. The detailed information concerning D-instanton effects encoded in these terms is related to the problem of evaluating the Witten index for $N$ D-particles in the type IIA theory. Using the AdS/CFT conjecture, it also leads to very specific predictions of multi-instanton contributions in $\cal N=4$ supersymmetric SU(N) Yang--Mills theory in the limit of strong 't Hooft coupling. [Extended version of lectures given at 22nd Johns Hopkins Workshop (Gothenberg, August 20-22 1998); `Quantum Aspects of Gauge Theories, Supersymmetry and Unification', TMR meeting (Corfu, September 20-26 1998); Andrjewski lectures (Berlin, November 1-6 1998).]
description: 80 pages, LaTeX