cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Nasitrema
Creators: name: Hernández-Orts, Jesús S.
name: Viola, M. Natalia Paso
name: García, Néstor A.
name: Crespo, Enrique A.
name: González, Raúl
name: García-Varela, Martín
name: Kuchta, Roman
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Platyhelminthes
Trematoda
Plagiorchiida
Nasitrematidae
Nasitrema

description: Nasitrema sp.
Host: Globicephala melas (Traill) Site in host: air sinuses
Locality: Tierra del Fuego province References: Raga et al. (1994a)
description: Published as part of Hernández-Orts, Jesús S., Viola, M. Natalia Paso, García, Néstor A., Crespo, Enrique A., González, Raúl, García-Varela, Martín & Kuchta, Roman, 2015, A checklist of the helminth parasites of marine mammals from Argentina, pp. 301-334 in Zootaxa 3936 (3) on page 324, DOI: 10.11646/zootaxa.3936.3.1, http://zenodo.org/record/236696
Covariational reasoning in Bayesian situations
Creators: name: Büchter, Theresa
name: Eichler, Andreas
name: Böcherer-Linder, Katharina
name: Vogel, Markus
name: Binder, Karin
name: Krauss, Stefan
name: Steib, Nicole
Publisher: name: Universität Regensburg
Year: 2024
Subjects: subject: Covariational reasoning, Bayesian reasoning, Double-tree, Unit square, Natural frequencies, SOLO taxonomy
subject: 150 Psychologie
subject: 370 Erziehung, Schul- und Bildungswesen
subject: 510 Mathematik

description: Previous studies on Bayesian situations, in which probabilistic information is used to update the probability of a hypothesis, have often focused on the calculation of a posterior probability. We argue that for an in-depth understanding of Bayesian situations, it is (apart from mere calculation) also necessary to be able to evaluate the effect of changes of parameters in the Bayesian situation and the consequences, e.g., for the posterior probability. Thus, by understanding Bayes’ formula as a function, the concept of covariation is introduced as an extension of conventional Bayesian reasoning, and covariational reasoning in Bayesian situations is studied. Prospective teachers (N=173) for primary (N=112) and secondary (N=61) school from two German universities participated in the study and reasoned about covariation in Bayesian situations. In a mixed-methods approach, firstly, the elaborateness of prospective teachers’ covariational reasoning is assessed by analysing the arguments qualitatively, using an adaption of the Structure of Observed Learning Outcome (SOLO) taxonomy. Secondly, the influence of possibly supportive variables on covariational reasoning is analysed quantitatively by checking whether (i) the changed parameter in the Bayesian situation (false-positive rate, true-positive rate or base rate), (ii) the visualisation depicting the Bayesian situation (double-tree vs. unit square) or (iii) the calculation (correct or incorrect) influences the SOLO level. The results show that among these three variables, only the changed parameter seems to influence the covariational reasoning. Implications are discussed.
Histrio histrio histrio (Linnaeus 1758
Creators: name: Andréfouët, Serge
name: Chen, Wei-Jen
name: Kinch, Jeff
name: Mana, Ralph
name: Russell, Barry C.
name: Tully, Dean
name: White, William T.
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Lophiiformes
Antennariidae
Histrio
Histrio histrio

description: Histrio histrio (Linnaeus 1758) — Sargassumfish
Status at New Ireland. First recorded from Kavieng, New Ireland as Antennarius marmoratus by Duncker & Mohr (1929: 70), based on ZMH 11997.
Distribution and habitat. New Ireland: 2.—General distribution: Circumtropical except eastern Pacific Ocean. Among floating sargassum. Marine.
description: Published as part of Andréfouët, Serge, Chen, Wei-Jen, Kinch, Jeff, Mana, Ralph, Russell, Barry C., Tully, Dean & White, William T., 2019, Checklist of the marine and estuarine fishes of New Ireland Province, Papua New Guinea, western Pacific Ocean, with 810 new records, pp. 1-360 in Zootaxa 4588 (1) on pages 72-73, DOI: 10.11646/zootaxa.4588.1.1, http://zenodo.org/record/2988163
Tarisa virescens Herrich-Schaeffer 1851
Creators: name: Ghahari, Hassan
name: Moulet, Pierre
name: Rider, David A.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Pentatomidae
Tarisa
Tarisa virescens

description: Tarisa virescens Herrich-Schaeffer, 1851
Tarisa virescens Herrich-Schaeffer, 1851: 348; Odontotarsus notoceras Kolenati, 1857: 497; Tarisa virescens var. obtutior Reuter, 1901: 33.
Distribution in Iran. Kermanshah (Sakenin et al. 2010; Samin et al. 2011a), Khorasan, Tehran (Linnavuori 2008), Iran (no locality cited) (Aukema et al. 2013).
General distribution. Russia (southern teritories), Caucasus and Central Asia, Near East.
Host plant. On Artemisia sp. (Asteraceae) (Linnavuori 2008).
Comments. Péricart (2010) considered T. osmanica Hoberlandt (1956) as a synonym of this species (but not Rider 2006); we do not know osmanica so we conserve Rider’s (2006) statement.
description: Published as part of Ghahari, Hassan, Moulet, Pierre & Rider, David A., 2014, An annotated catalog of the Iranian Pentatomoidea (Hemiptera: Heteroptera: Pentatomomorpha), pp. 1-95 in Zootaxa 3837 (1) on page 73, DOI: 10.11646/zootaxa.3837.1.1, http://zenodo.org/record/286722
Pre-exption issues - New Jersey Chamber of Commerce v. Hughey -- Appendix, 1985
Creators: name: No Name Supplied
Publisher: name: No Publisher Supplied
Year: 1985

description: These two consolidated actions challenge the New Jersey Worker and Community Right to Know Act, primarily on the grounds that the Acts preempted by regulations or standards promulgated under the federal Occupational Safety and Health Act of 1970. Plaintiffs further contend that certain of the Right to Know Act's disclosure requirements constitute an unreasonable exercise of the State's police power and will result in a taking of trade secrets without due process of law.
Halieutaea stellata
Creators: name: Andréfouët, Serge
name: Chen, Wei-Jen
name: Kinch, Jeff
name: Mana, Ralph
name: Russell, Barry C.
name: Tully, Dean
name: White, William T.
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Lophiiformes
Ogcocephalidae
Halieutaea
Halieutaea stellata

description: Halieutaea stellata (Vahl 1797) — Minipizza batfish (Fig. 25)
Status at New Ireland. New record, based on NTUM material (1 specimen, St. CP 4419-3, northeast of New Hanover; 2 specimens, St. CP 4498-23-24, north of New Hanover).
Distribution and habitat. New Ireland: 1.—General distribution: Indo-West Pacific: India east to Philippines and New Guinea, north to southern Japan, south to northern Australia and New Caledonia. Demersal, 50–400 m depth. Marine.
description: Published as part of Andréfouët, Serge, Chen, Wei-Jen, Kinch, Jeff, Mana, Ralph, Russell, Barry C., Tully, Dean & White, William T., 2019, Checklist of the marine and estuarine fishes of New Ireland Province, Papua New Guinea, western Pacific Ocean, with 810 new records, pp. 1-360 in Zootaxa 4588 (1) on page 73, DOI: 10.11646/zootaxa.4588.1.1, http://zenodo.org/record/2988163
Oschmarinella rochebruni Poirier 1886
Creators: name: Hernández-Orts, Jesús S.
name: Viola, M. Natalia Paso
name: García, Néstor A.
name: Crespo, Enrique A.
name: González, Raúl
name: García-Varela, Martín
name: Kuchta, Roman
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Platyhelminthes
Trematoda
Plagiorchiida
Brachycladiidae
Oschmarinella
Oschmarinella rochebruni

description: Oschmarinella rochebruni (Poirier, 1886)
Host: Delphinus delphis Linnaeus
Site in host: intestine
Locality: northern Patagonia (39º–42ºS, 60º–62ºW) Specimens in collections: USNPC (99620)V References: Berón-Vera et al. (2007)
description: Published as part of Hernández-Orts, Jesús S., Viola, M. Natalia Paso, García, Néstor A., Crespo, Enrique A., González, Raúl, García-Varela, Martín & Kuchta, Roman, 2015, A checklist of the helminth parasites of marine mammals from Argentina, pp. 301-334 in Zootaxa 3936 (3) on page 324, DOI: 10.11646/zootaxa.3936.3.1, http://zenodo.org/record/236696
Lixus motacilla Schoenherr 1832
Creators: name: Gültekin, Levent
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Lixus
Lixus motacilla

description: Lixus motacilla Schoenherr, 1832
Lixus motacilla Schoenherr, 1832: 222
Current status: Lixus motacilla Schoenherr, 1832 is a valid species.
Type. In Schoenherr’s collection at SMNH, under the name “ Motacilla, Schh., 16–25, Bhn.” is a male (pinned through the right elytron, left middle and right fore tarsi beyond segment 1, right hind leg missing) bearing the handwritten label: “Caucasus, Ménétries”, and fitting description with type locality as Caucasus. It is here designated as lectotype with“ Lectotypus, 3, Lixus motacilla Schh., Gültekin des. 2006”.
Remarks. The authorship of this species is Schoenherr (1832: 222) not Boheman. In Schoenherr (1835: 14), Boheman gave a more detailed redescription. This species is related to Lixus cylindrus (F.), but clearly differs by the shape of rostrum, elytral pattern, sulciform striae and aedeagus.
description: Published as part of Gültekin, Levent, 2010, Taxonomic remarks on some genera of Lixini Schoenherr, 1823 (Coleoptera: Curculionidae), pp. 1-21 in Zootaxa 2411 on page 8, DOI: 10.5281/zenodo.293282
Pre-emption issues -- New Jersey Chamber of Commerce v. Hughey -- Opinions and judgments, 1985 and 1988-1989
Creators: name: Debevoise, Dickinson R.
name: Dalton, Daniel J.
Publisher: name: No Publisher Supplied
Year: 1988

description: Opinion and judgments (and related correspondence) in the case of New Jersey Chamber of Commerce v. Hughey, dated 1985 and 1988-89.
Coptosoma (Coptosoma) scutellatum Geoffroy 1785
Creators: name: Ghahari, Hassan
name: Moulet, Pierre
name: Rider, David A.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Echinodermata
Echinoidea
Stomopneustoida
Glyptocidaridae
Coptosoma
Coptosoma scutellatum

description: Coptosoma (Coptosoma) scutellatum (Geoffroy, 1785)
Cimex scarabaeoides Sulzer, 1761: 26 (non Linnaeus, 1758); Cimex scutellatus Geoffroy, 1785: 195; Cimex globosus Fabricius, 1794: 88; Coptosoma dilatata Motschulzky, 1860: 501; Coptosoma anatolica Horváth, 1883: 21; Coptosoma scutellatum var. violacea Davidová Vilimová & Štys, 1980: 117.
Material examined. East Azarbaijan province: Arasbaran (857 m), 1♀, summer 2006. Distribution in Iran. Guilan, Khorassan (Linnavuori 2007), Iran (no locality cited) (Aukema et al. 2013). General distribution. Euro-Siberian except Great Britain and Scandinavia extending to China; not in North Africa except in Algeria.
Comments. On Fabaceae (Dusoulier & Lupoli 2006).
description: Published as part of Ghahari, Hassan, Moulet, Pierre & Rider, David A., 2014, An annotated catalog of the Iranian Pentatomoidea (Hemiptera: Heteroptera: Pentatomomorpha), pp. 1-95 in Zootaxa 3837 (1) on page 74, DOI: 10.11646/zootaxa.3837.1.1, http://zenodo.org/record/286722
Lixus biimpressus Gyllenhal 1835
Creators: name: Gültekin, Levent
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Lixus
Lixus biimpressus

description: Lixus biimpressus Gyllenhal, 1835
Lixus biimpressus Gyllenhal, 1835: 4
Current status: Lixus biimpressus Gyllenhal, 1835 is a junior synonym of L. paraplecticus (Linneaus, 1758).
Type. In Schoenherr’s collection at SMNH, under the name “ Bi-impressus, Schh., 2-2, Ghl.” is an immature female pinned through the right elytron (elytra strongly separated) bearing the handwritten label: “Sibir: occid. Gebler”, and fitting description with type locality as Sibiria occidentalis. It is here designated as the lectotype with “ Lectotypus, Ƥ, Lixus biimpressus Gyll., Gültekin des. 2006”, “ Lixus paraplecticus (L.), Gültekin det. 2006.
Remarks. Capiomont (1874) first established Lixus biimpressus Gyllenhal as a synonym of L. paraplecticus (Linneaus, 1758).
description: Published as part of Gültekin, Levent, 2010, Taxonomic remarks on some genera of Lixini Schoenherr, 1823 (Coleoptera: Curculionidae), pp. 1-21 in Zootaxa 2411 on page 8, DOI: 10.5281/zenodo.293282
Diceratias trilobus Balushkin & Fedorov 1986
Creators: name: Andréfouët, Serge
name: Chen, Wei-Jen
name: Kinch, Jeff
name: Mana, Ralph
name: Russell, Barry C.
name: Tully, Dean
name: White, William T.
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Lophiiformes
Diceratiidae
Diceratias
Diceratias trilobus

description: Diceratias trilobus Balushkin & Fedorov 1986 — Two-rod anglerfish
Status at New Ireland. First recorded from north of Feni Island, Tannga Group, Namatanai District, New Ireland by Pietsch et al. (2006: S98); previously misidentified as Diceratias bispinosus (non Günther, 1887) by Paxton & Lavenberg (1973: 47); based on AMS I.15602-001.
Distribution and habitat. New Ireland: 5.—General distribution: widespread in southeastern Indian Ocean and western Pacific Ocean. Bathypelagic, 503–1216 m depth. Marine.
description: Published as part of Andréfouët, Serge, Chen, Wei-Jen, Kinch, Jeff, Mana, Ralph, Russell, Barry C., Tully, Dean & White, William T., 2019, Checklist of the marine and estuarine fishes of New Ireland Province, Papua New Guinea, western Pacific Ocean, with 810 new records, pp. 1-360 in Zootaxa 4588 (1) on page 74, DOI: 10.11646/zootaxa.4588.1.1, http://zenodo.org/record/2988163
Oschmarinella
Creators: name: Hernández-Orts, Jesús S.
name: Viola, M. Natalia Paso
name: García, Néstor A.
name: Crespo, Enrique A.
name: González, Raúl
name: García-Varela, Martín
name: Kuchta, Roman
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Platyhelminthes
Trematoda
Plagiorchiida
Brachycladiidae
Oschmarinella

description: Oschmarinella sp.
Host: Lagenorhynchus cruciger (Quoy & Gaimard) Site in host: intestine
Locality: Playa Unión (43º20'S, 65º00'W), Rawson, Chubut province References: Fernández et al. (2003) and Lunaschi and Drago (2007)
description: Published as part of Hernández-Orts, Jesús S., Viola, M. Natalia Paso, García, Néstor A., Crespo, Enrique A., González, Raúl, García-Varela, Martín & Kuchta, Roman, 2015, A checklist of the helminth parasites of marine mammals from Argentina, pp. 301-334 in Zootaxa 3936 (3) on pages 324-325, DOI: 10.11646/zootaxa.3936.3.1, http://zenodo.org/record/236696
Synthesium pontoporiae Raga, Aznar, Balbuena & Dailey 1994
Creators: name: Hernández-Orts, Jesús S.
name: Viola, M. Natalia Paso
name: García, Néstor A.
name: Crespo, Enrique A.
name: González, Raúl
name: García-Varela, Martín
name: Kuchta, Roman
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Platyhelminthes
Trematoda
Diplostomida
Campulidae
Synthesium
Synthesium pontoporiae

description: Synthesium pontoporiae (Raga, Aznar, Balbuena & Dailey, 1994)
(syn. Hadwenius pontoporiae Raga, Aznar, Balbuena & Dailey, 1994)
Host: Pontoporia blainvillei (Gervais & d’Orbigny)
Site in hosts: duodenum, intestine, stomach
Locality: Claromecó (38º52'S, 60º05'W) and Necochea (38º27'S, 58º50'W), Buenos Aires province
Specimens in collections: BMNH (1993.5.17.1–2)P,V; DAB (PB.N88.1–21, PB.N89.1–16, and PB.N90.l–ll)V; USNPC (82915, 82916, 86760, 86761, 86762)H,P
References: Aznar et al. (1994; 1995; 1997), Raga et al. (1994b) and Lunaschi and Drago (2007)
description: Published as part of Hernández-Orts, Jesús S., Viola, M. Natalia Paso, García, Néstor A., Crespo, Enrique A., González, Raúl, García-Varela, Martín & Kuchta, Roman, 2015, A checklist of the helminth parasites of marine mammals from Argentina, pp. 301-334 in Zootaxa 3936 (3) on page 325, DOI: 10.11646/zootaxa.3936.3.1, http://zenodo.org/record/236696
Press clippings [and releases], 1982
Creators: name: Dalton, Daniel J.
name: Johnson, Tom
name: Goldberg, Elliot
name: Micko, Lillian
name: Bledsoe, Lysbeth
name: Moore, Lee
name: Wyman, Andrea S.A.
name: Ruane, Michael E.
name: Clark, George
name: Donohue, Joseph
name: Stewart, Ann
name: Goldberg, Elliot
name: Weiner, Tim
name: Diemer, Joe
name: Hester, Tom
name: Joyce, Marilyn
name: Carney, Leo H.
name: Riordan, Kevin
name: Quinn, Tim
name: Estes, Kenneth R.
Publisher: name: No Publisher Supplied
Year: 1982

description: Assorted press clippings and releases dated 1982.
Eurygaster maura Linnaeus 1758
Creators: name: Ghahari, Hassan
name: Moulet, Pierre
name: Rider, David A.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Scutelleridae
Eurygaster
Eurygaster maura

description: Eurygaster maura (Linnaeus, 1758)
Cimex maurus Linnaeus, 1758: 441; Cimex cinereus Goeze, 1778: 276; Tetyra picta Fabricius, 1803: 136.
Distribution in Iran. Ardabil (Ghahari et al. 2010a), East Azarbaijan (Brown & Eralp 1962; Hoberlandt 1997; Modarres Awal 1997b; Khalilzadeh et al. 2007; Gharaat et al. 2009; Hassanzadeh et al. 2009a, b; Khaghaninia et al. 2010a, b, 2011, 2013), Golestan (Safavi 1959; Farahbakhsh 1961; Brown & Eralp 1962; Modarres Awal 1997b), Isfahan (Samin & Asgari 2012), Khorasan (Linnavuori 2008; Modarres Awal 2008), Mazandaran (Modarres Awal 1997b; Sakenin et al. 2008), Semnan (Galini et al. 2012), Tehran (Samin et al. 2010a), West Azarbaijan (Brown & Eralp 1962; Hoberlandt 1997), Iran (no locality cited) (Khanjani 2006; Göllner-Scheiding 2006b).
General distribution. European, the Maghreb extending to Central Asia (Iran, Kazakhstan, Turkmenistan) and Near East.
Host plants. On barley (Modarres Awal 1997b), wheat (Modarres Awal 1997b; Khanjani 2006; Hassanzadeh et al. 2009a, b; Khaghaninia et al. 2010a, b, 2011), wild poaceous plants (Modarres Awal 2008), Trifolium pretense (Poaceae), Myrtus communis (Myrtaceae) (Sakenin et al. 2008).
Comment. Numerous varieties with no taxonomic value have been described, e.g. meridionalis, rufopicta by Péneau 1911, nigricans, maculata by Mancini 1931, aequalis, granulosa, pallidus, rutilus, punctata by Wagner 1938, pallens, melanaria, rubida, umbrosa by Halászfy 1959.
description: Published as part of Ghahari, Hassan, Moulet, Pierre & Rider, David A., 2014, An annotated catalog of the Iranian Pentatomoidea (Hemiptera: Heteroptera: Pentatomomorpha), pp. 1-95 in Zootaxa 3837 (1) on page 75, DOI: 10.11646/zootaxa.3837.1.1, http://zenodo.org/record/286722
Synthesium tursionis Marchi 1873
Creators: name: Hernández-Orts, Jesús S.
name: Viola, M. Natalia Paso
name: García, Néstor A.
name: Crespo, Enrique A.
name: González, Raúl
name: García-Varela, Martín
name: Kuchta, Roman
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Platyhelminthes
Trematoda
Diplostomida
Campulidae
Synthesium
Synthesium tursionis

description: Synthesium tursionis (Marchi, 1873)
Host: Tursiops truncatus (Montagu)
Site in host: intestine
Locality: northern Patagonia (40°30'– 43°30'S, 64°–65°W) Specimens in collections: BMNH (2013.11.29.9)V References: Romero et al. (2014)
description: Published as part of Hernández-Orts, Jesús S., Viola, M. Natalia Paso, García, Néstor A., Crespo, Enrique A., González, Raúl, García-Varela, Martín & Kuchta, Roman, 2015, A checklist of the helminth parasites of marine mammals from Argentina, pp. 301-334 in Zootaxa 3936 (3) on page 325, DOI: 10.11646/zootaxa.3936.3.1, http://zenodo.org/record/236696
Lixus gemellatus Gyllenhal 1835
Creators: name: Gültekin, Levent
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Lixus
Lixus gemellatus

description: Lixus gemellatus Gyllenhal, 1835
Lixus gemellatus Gyllenhal, 1835: 6
Current status: Lixus gemellatus at Gyllenhal, 1835 is a junior synonym of L. iridis Olivier, 1807.
Type. In Schoenherr’s collection at SMNH, under the name “ Gemellatus, Gyllenhal., 5-5, Ghl.” is a female in good condition pinned through right elytron bearing the handwritten label: “ Germania, Schneider, Mus: Ghl.”, and fitting description with type locality as Germania. It is here designated as lectotype with “ Lectotypus, Ƥ, Lixus gemellatus Gyll., Gültekin des. 2006”, “ Lixus iridis Ol .. Gültekin det. 2006”.
Remarks. Gemminger and Harold (1871) first established Lixus gemellatus Gyllenhal as a synonym of L. iridis Olivier.
description: Published as part of Gültekin, Levent, 2010, Taxonomic remarks on some genera of Lixini Schoenherr, 1823 (Coleoptera: Curculionidae), pp. 1-21 in Zootaxa 2411 on page 10, DOI: 10.5281/zenodo.293282
Eurygaster testudinaria subsp. testudinaria Geoffroy 1785
Creators: name: Ghahari, Hassan
name: Moulet, Pierre
name: Rider, David A.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Scutelleridae
Eurygaster
Eurygaster testudinaria
Eurygaster testudinaria testudinaria (geoffroy, 1785)

description: Eurygaster testudinaria testudinaria (Geoffroy, 1785)
Cimex testudinarius Geoffroy, 1785: 195; Eurygaster maura var. notatus Ferrari, 1874: 119; Eurygaster maura var. cinerea Rey, 1887: 1; Eurygaster maura var. grisescens Rey, 1888: 92; Eurygaster maura var. rufescens Oliveira, 1895: 105; Eurugaster sodalis Horváth, 1895: 221; Eurygaster maura var. borealis Péneau, 1911: 174; Eurygaster sodalis var. decorata Péneau, 1911: 179.
Distribution in Iran. East Azarbaijan (Brown & Eralp 1962), Guilan, Khorasan (Linnavuori 2008), Mazandaran (Modarres Awal 1997b; Sakenin et al. 2008), Iran (no locality cited) (Khanjani 2006; Göllner-Scheiding 2006b).
General distribution. Palearctic.
Host plants. On Cyperaceae (Linnavuori 2008) and on wheat (Modarres Awal 1997b; Khanjani 2006), Hibiscus trionum, Malva montana (both Malvaceae), Vicia faba (Fabaceae) (Sakenin et al. 2008). On Poaceae and Cyperaceaea in wet biotopes (Dusoulier & Lupoli 2006).
Comment. Several varieties (without taxonomic value) have been described for this species, e.g. obscuratus, triguttatus, tuberculatus, lurida, inclusa, punctulata by Wagner 1938, 1940; flavida, rosea, nigrita by Halászfy 1959.
Another subspecies (testudinaria sinica Walker, 1867) has been described from China and is distributed in China, Korea and Japan; according to Göllner-Scheiding (2006b) it is a "poorly differentiated subspecies".
description: Published as part of Ghahari, Hassan, Moulet, Pierre & Rider, David A., 2014, An annotated catalog of the Iranian Pentatomoidea (Hemiptera: Heteroptera: Pentatomomorpha), pp. 1-95 in Zootaxa 3837 (1) on pages 75-76, DOI: 10.11646/zootaxa.3837.1.1, http://zenodo.org/record/286722
Synthesium
Creators: name: Hernández-Orts, Jesús S.
name: Viola, M. Natalia Paso
name: García, Néstor A.
name: Crespo, Enrique A.
name: González, Raúl
name: García-Varela, Martín
name: Kuchta, Roman
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Platyhelminthes
Trematoda
Diplostomida
Campulidae
Synthesium

description: Synthesium sp.
Host: Cephalorhynchus commersonii (Lacépède)
Site in host: stomach
Locality: Tierra del Fuego province; central Patagonia and San Jorge Gulf (45º–47ºS)
References: Berón-Vera et al. (2001) and Lunaschi and Drago (2007)
Host: Lagenorhynchus cruciger (Quoy & Gaimard)
Site in host: intestine
Locality: Playa Unión (43º20'S, 65º00'W), Rawson, and Playa Paraná (42º49'S, 64º53'W), Puerto Madryn, Chubut province
References: Fernández et al. (2003, reported as Hadwenius sp. 1 and Hadwenius sp. 2) and Lunaschi and Drago (2007)
Host: Lagenorhynchus obscurus (Gray)
Site in host: intestine, stomach
Locality: Patagonia
References: Dans et al. (1999) and Lunaschi and Drago (2007)
description: Published as part of Hernández-Orts, Jesús S., Viola, M. Natalia Paso, García, Néstor A., Crespo, Enrique A., González, Raúl, García-Varela, Martín & Kuchta, Roman, 2015, A checklist of the helminth parasites of marine mammals from Argentina, pp. 301-334 in Zootaxa 3936 (3) on page 325, DOI: 10.11646/zootaxa.3936.3.1, http://zenodo.org/record/236696
Synthesium
Creators: name: Hernández-Orts, Jesús S.
name: Viola, M. Natalia Paso
name: García, Néstor A.
name: Crespo, Enrique A.
name: González, Raúl
name: García-Varela, Martín
name: Kuchta, Roman
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Platyhelminthes
Trematoda
Diplostomida
Campulidae
Synthesium

description: Synthesium spp.
Host: Lagenorhynchus cruciger (Quoy & Gaimard) Site in host: intestine
Locality: Estancia Moat, Tierra del Fuego province References: Dougnac and Fredes (2012)
description: Published as part of Hernández-Orts, Jesús S., Viola, M. Natalia Paso, García, Néstor A., Crespo, Enrique A., González, Raúl, García-Varela, Martín & Kuchta, Roman, 2015, A checklist of the helminth parasites of marine mammals from Argentina, pp. 301-334 in Zootaxa 3936 (3) on page 325, DOI: 10.11646/zootaxa.3936.3.1, http://zenodo.org/record/236696
Crenimugil buchanani
Creators: name: Andréfouët, Serge
name: Chen, Wei-Jen
name: Kinch, Jeff
name: Mana, Ralph
name: Russell, Barry C.
name: Tully, Dean
name: White, William T.
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Mugiliformes
Mugilidae
Crenimugil
Crenimugil buchanani

description: Crenimugil buchanani (Bleeker 1853) — Bluetail mullet
Status at New Ireland. New record, based on specimens observed by Jeff Kinch during CFMDP Survey at Kavieng fish market in 2004–2005.
Distribution and habitat. New Ireland: 2.—General distribution: South and East Africa east to Mariana and Caroline islands, north to southern Japan, south to northern Australia and New Caledonia. Found in shallow coastal waters, entering lagoons, estuaries and rivers, 0–3 m depth. Freshwater, transitional water and marine.
description: Published as part of Andréfouët, Serge, Chen, Wei-Jen, Kinch, Jeff, Mana, Ralph, Russell, Barry C., Tully, Dean & White, William T., 2019, Checklist of the marine and estuarine fishes of New Ireland Province, Papua New Guinea, western Pacific Ocean, with 810 new records, pp. 1-360 in Zootaxa 4588 (1) on page 74, DOI: 10.11646/zootaxa.4588.1.1, http://zenodo.org/record/2988163
Lixus incarnatus Gyllenhal 1835
Creators: name: Gültekin, Levent
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Lixus
Lixus incarnatus

description: Lixus incarnatus Gyllenhal, 1835
Lixus incarnatus Gyllenhal, 1835: 7
Current status: Lixus incarnatus Gyllenhal, 1835 is a junior synonym of L. iridis Olivier, 1807.
Type. In Schoenherr’s collection at SMNH, under the name “ Incarnatus, Schh., 6–7, Ghl.” is an immature female pinned through the right elytron (elytra weakly separated, left antenna missing) bearing the handwritten label: “ L. umbellatarum Fabr., Jec: Schneider”. The type locality is not mentioned, but the specimen is indicated as “A Dom. Schneider”. It is here designated as lectotype with “ Lectotypus, Ƥ, Lixus incarnatus Gyll., Gültekin des. 2006”, “ Lixus iridis Ol .. Gültekin det. 2006”.
Remarks. No type locality is indicated in the description, and it is only reported as “ A Dom. Schneider”. Gemminger and Harold (1871) first established Lixus incarnatus Gyllenhal as a synonym of L. iridis Olivier.
description: Published as part of Gültekin, Levent, 2010, Taxonomic remarks on some genera of Lixini Schoenherr, 1823 (Coleoptera: Curculionidae), pp. 1-21 in Zootaxa 2411 on page 10, DOI: 10.5281/zenodo.293282
Polyphyma scrobiculata Jakovlev 1877
Creators: name: Ghahari, Hassan
name: Moulet, Pierre
name: Rider, David A.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Polyphyma
Polyphyma scrobiculata

description: Polyphyma scrobiculata Jakovlev, 1877
Polyphyma scrobiculatum Jakovlev, 1877: 74.
Distribution in Iran. Semnan (Jakovlev 1877; Oshanin 1906, 1912, Putshkov 1965; Hoberlandt 1997), Iran (no locality cited) (Göllner-Scheiding 2006b).
General distribution. Iran, Turkmenistan.
description: Published as part of Ghahari, Hassan, Moulet, Pierre & Rider, David A., 2014, An annotated catalog of the Iranian Pentatomoidea (Hemiptera: Heteroptera: Pentatomomorpha), pp. 1-95 in Zootaxa 3837 (1) on page 76, DOI: 10.11646/zootaxa.3837.1.1, http://zenodo.org/record/286722
Ascocotyle patagoniensis Hernandez-Orts, Montero, Crespo, Garcia, Raga & Aznar 2012
Creators: name: Hernández-Orts, Jesús S.
name: Viola, M. Natalia Paso
name: García, Néstor A.
name: Crespo, Enrique A.
name: González, Raúl
name: García-Varela, Martín
name: Kuchta, Roman
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Platyhelminthes
Trematoda
Plagiorchiida
Heterophyidae
Ascocotyle
Ascocotyle patagoniensis

description: Ascocotyle patagoniensis Hernández-Orts, Montero, Crespo, García, Raga & Aznar, 2012
Host: Otaria flavescens (Shaw)
Site in host: intestine
Locality: northern Patagonia (40º43'– 43º20'S, 63º04'– 65º07'W)
Specimens in collection s: holotype BMNH (2012.2.13.1, 2012.2.13.2–6)H,P; USNPC (105290)P; MNCN (4.02/ 52–4.02/57)P; MZU (EF2 11592–11605)V
References: Hernández-Orts et al. (2012a; 2013b)
description: Published as part of Hernández-Orts, Jesús S., Viola, M. Natalia Paso, García, Néstor A., Crespo, Enrique A., González, Raúl, García-Varela, Martín & Kuchta, Roman, 2015, A checklist of the helminth parasites of marine mammals from Argentina, pp. 301-334 in Zootaxa 3936 (3) on page 326, DOI: 10.11646/zootaxa.3936.3.1, http://zenodo.org/record/236696
Press clippings, 1984
Creators: name: Blake, Chris
name: Horvitz, Paul
name: Kean, Thomas
name: Carney, Leo H.
name: Elissa, McCrary
name: Johnson, Tom
name: Pembleton, Mary E.
name: Jones, Angela
name: Byrd, Frederick W.
name: Peterson, Lisa
name: Sterling, Guy
name: Sanders, Bob
name: Gluck, Gabriel H.
name: Peet, Judy
name: Solomon, Jolie B.
name: Russell, Mark
name: Coombe, Deborah
name: Orr, J. Scott
name: Schwab, David
Publisher: name: No Publisher Supplied
Year: 1984

description: Assorted press clippings dated 1984.
Press clippings [and releases], January-April 1983
Creators: name: Allen, Frank
name: Johnson, Tom
name: Brownstein, Pamela
name: Bishop, Gordon
name: Morris, Charles W.
name: Trento, Joe
name: Thompson, R. Brierley
name: Fitzsimmons, Helen
name: Diemer, Joe
name: Micko, Lillian
name: Stewart, Ann
name: Nogaki, Jane
name: Shrom, Ralph
name: Morford, James C.
name: Engler, Rick
name: Jaffe, Mark
name: Wright, Chapin
name: Mullin, Edward
name: Carney, Leo H.
name: Applegate, Debbie
name: Hester, Tom
Publisher: name: No Publisher Supplied
Year: 1983

description: Assorted press clippings and press releases dated January-April, 1983.
Press clippings [and releases], August-December 1983
Creators: name: Engler, Rick
name: DePalma, Anthony
name: Kalik, Barbara Faith
name: Tollerson, Ernest
name: Warshaw, Donald
name: Scherzer, Eric
name: Fink, David
name: Freedman, Lewis
name: Breslin, Patrick
name: Wagner, Dodie Murphy
name: Sullivan, Joseph F.
name: Johnson, Tom
name: Diemer, Joe
name: Hanley, Robert
name: Horvitz, Paul
Publisher: name: No Publisher Supplied
Year: 1983

description: Press clippings and releases dated August-December, 1983.
Crenimugil crenilabis
Creators: name: Andréfouët, Serge
name: Chen, Wei-Jen
name: Kinch, Jeff
name: Mana, Ralph
name: Russell, Barry C.
name: Tully, Dean
name: White, William T.
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Mugiliformes
Mugilidae
Crenimugil
Crenimugil crenilabis

description: Crenimugil crenilabis (Forsskål in Niebuhr 1775) — Fringelip mullet
Status at New Ireland. First recorded from New Ireland as Mugil cirrhostomus by Valenciennes in Cuvier & Valenciennes (1836: 127); reported as Mugil crenilabris by Günther (1881: 219). Specimens observed by Jeff Kinch during CFMDP Survey at Kavieng fish market in 2004–2005, and by Barry C. Russell on 7, 14 and 21 June 2014. A school photographed at Lissenung Island, Kavieng District, 2 m depth, by Dean Tully on 26 June 2013.
Distribution and habitat. New Ireland: 2.—General distribution: Red Sea and East Africa east to Line and Tuamotu islands, north to southern Japan, south to Lord Howe Island. Found in shallow coastal waters, entering lagoons, estuaries and rivers, 0–5 m depth. Freshwater, transitional water and marine.
description: Published as part of Andréfouët, Serge, Chen, Wei-Jen, Kinch, Jeff, Mana, Ralph, Russell, Barry C., Tully, Dean & White, William T., 2019, Checklist of the marine and estuarine fishes of New Ireland Province, Papua New Guinea, western Pacific Ocean, with 810 new records, pp. 1-360 in Zootaxa 4588 (1) on page 75, DOI: 10.11646/zootaxa.4588.1.1, http://zenodo.org/record/2988163
Press clippings [and releases], May-July 1983
Creators: name: Dwyer, Timothy
name: Applegate, Debbie
name: Geary, Robert J.
name: Wright, Chapin
name: Morris, Charles W.
name: Richardson, Charles
name: Narus, Bob
name: Drogin, Bob
name: Jaffe, Mark
name: Asher, James
name: Feinsilber, Mike
name: Bissinger, H.G.
name: FitzGerald, Susan
name: Purdy, Matthew
name: Goldberg, Elliot
name: Diemer, Joe
name: Rosenthal, Tom
name: Pothier, Dick
name: Bishop, Gordon
name: Johnson, Tom
name: Wagner, Dodie Murphy
name: Estes, Ken
name: Tollerson, Ernest
Publisher: name: No Publisher Supplied
Year: 1983

description: Assorted press clippings and releases dated May-July, 1983.
PAK4 as a drug target in breast cancer therapy
Creators: name: Rane, Chetan K.
Publisher: name: No Publisher Supplied
Year: 2017

description: PAK4, belonging to Group II PAKs, is an important signaling protein with key  roles in regulating cell growth, cell survival and cell morphology. PAK4 protein  levels are higher in several subtypes of breast cancer cells and PAK4 gene is  amplified in basal like breast cancer. PAK4 overexpression in a mouse mammary  epithelial cell line (iMMEC) results in oncogenic transformation of these cells,  while siRNA mediated PAK4 down regulation in a human triple negative breast  cancer cell line, MDA-MB-231, resulted in significant inhibition of its tumorigenic  potential. These results point to a central role for PAK4 in mammary  tumorigenesis. PAK4 expression pattern makes it an attractive drug target,  however, it is important to note that PAK4 has both kinase-dependent and –  independent functions in regulating tumor formation. Hence, blocking its kinase  activity alone is insufficient in blocking its tumorigenic potential. Our lab  collaborated with Karyopharm Therapeutics to investigate a novel PAK4 inhibitor,  KPT-9274. I observed that treatment with KPT-9274 and KPT-8752 (isoform of  KPT-9274) inhibited the cell growth, cell survival and cell motility of breast cancer  cell lines, with this effect most significantly observed in triple negative breast  cancer cell lines. I observed that treatment with KPT inhibitors inhibited PAK4  protein levels along with PAK4 associated downstream signaling pathways in  triple negative breast cancer cell lines. Most importantly, I observed that KPT-  9274 significantly inhibited tumor growth in mouse xenograft models of 3 human  triple negative breast cancer cell lines. KPT-9274 was capable of reducing  steady state PAK4 protein levels in vivo, without significantly affecting PAK1  protein levels, indicating that KPT-9274 exhibits in vivo PAK4 specificity. This  study shows that PAK4 can serve as a novel drug target in triple negative breast  cancer therapy and KPT-9274 can have clinical benefits for the triple negative  breast cancer population. Next, I analyzed RNA-seq data of samples collected  from non-transformed WT iMMECs and iMMECs overexpressing PAK4, that form  tumors in mice. Sequencing analysis identified several genes previously  unknown to be regulated by PAK4. Using q-PCR, I was able to validate the RNAseq  data, further suggesting that RNA-seq is a promising and reproducible tool to  study PAK4 induced transcriptional changes. This study reveals the PAK4  transcriptome profile in mammary tumor forming cells, and can provide  translational utility in other types of cancers as well. Delineating the varied  effectors of PAK4 signaling cascade will help uncover novel biomarkers for  cancer, with some serving as potential therapeutic targets.
Pholeter gastrophilus Kossack 1910
Creators: name: Hernández-Orts, Jesús S.
name: Viola, M. Natalia Paso
name: García, Néstor A.
name: Crespo, Enrique A.
name: González, Raúl
name: García-Varela, Martín
name: Kuchta, Roman
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Platyhelminthes
Trematoda
Plagiorchiida
Heterophyidae
Pholeter
Pholeter gastrophilus

description: Pholeter gastrophilus (Kossack, 1910)
Host: Cephalorhynchus commersonii (Lacépède)
Site in host: stomach
Locality: central Patagonia and San Jorge Gulf (45º–47ºS)
References: Berón-Vera et al. (2001) and Lunaschi and Drago (2007)
Host: Delphinus delphis Linnaeus
Site in host: stomach
Locality: northern Patagonia (39º–42ºS, 60º–62ºW)
Specimens in collections: USNPC (99624)V
References: Berón-Vera et al. (2007)
Host: Lagenorhynchus obscurus (Gray)
Site in the host: intestine
Locality: Patagonia
References: Dans et al. (1999) and Lunaschi and Drago (2007)
Host: Phocoena spinipinnis Burmeister
Site in host: stomach
Locality: Claromecó (38º52'S, 60º05'W) and Necochea (38º27'S, 58º50'W), Buenos Aires province; Punta Bengoa, Chubut province
Specimens in collections: MML (accession numbers not provided)V
References: Corcuera et al. (1995) and Berón-Vera et al. (2008)
Host: Pontoporia blainvillei (Gervais & d’Orbigny)
Site in host: stomach
Locality: Claromecó (38º52'S, 60º05'W) and Necochea (38º27'S, 58º50'W), Buenos Aires province
Specimens in collections: DAB (accession numbers not provided)V
References: Aznar et al. (1994; 1995) and Lunaschi and Drago (2007)
Host: Tursiops truncatus (Montagu)
Site in host: duodenal ampulla, main stomach, pyloric stomach
Locality: northern Patagonia (40°30'– 43°30'S, 64°–65°W)
Specimens in collections: BMNH (2013.11.29.1–2)V
References: Romero et al. (2014)
description: Published as part of Hernández-Orts, Jesús S., Viola, M. Natalia Paso, García, Néstor A., Crespo, Enrique A., González, Raúl, García-Varela, Martín & Kuchta, Roman, 2015, A checklist of the helminth parasites of marine mammals from Argentina, pp. 301-334 in Zootaxa 3936 (3) on page 326, DOI: 10.11646/zootaxa.3936.3.1, http://zenodo.org/record/236696
Ceratocranum caucasicum
Creators: name: Ghahari, Hassan
name: Moulet, Pierre
name: Rider, David A.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Ceratocranum
Ceratocranum caucasicum

description: Ceratocranum caucasicum (Jakovlev, 1879)
Ceratocephala caucsica Jakovlev, 1879: 10; Ceratocranum caucasicum var. anthracinum Horváth, 1891: 75.
Distribution in Iran. East Azarbaijan (Hoberlandt 1997), Golestan, (Jakovlev 1880; Oshanin 1906, 1912), Kordestan (Putshkov 1965), Iran (no locality cited) (Göllner-Scheiding 2006b).
General distribution. Armenia, Azerbaijan, Iran.
description: Published as part of Ghahari, Hassan, Moulet, Pierre & Rider, David A., 2014, An annotated catalog of the Iranian Pentatomoidea (Hemiptera: Heteroptera: Pentatomomorpha), pp. 1-95 in Zootaxa 3837 (1) on page 76, DOI: 10.11646/zootaxa.3837.1.1, http://zenodo.org/record/286722
Pancreatic cancer cell- and cancer-associated fibroblast-derived exosomes in disease progression, metastasis, and therapy
Creators: name: Chen, Yijun
name: Kleeff, Jörg H.
name: Sunami, Yoshiaki
Publisher: name: Universitäts- und Landesbibliothek Sachsen-Anhalt
Year: 2024
Subjects: subject: 610

description: Exosomes play a crucial role in the progression and spread of pancreatic cancer, serving not only as promoters of tumor growth and organ-specific metastasis but also as promising biomarkers and targets for treatment. These nano vesicles enhance intercellular communication by transferring bioactive molecules, such as proteins and RNAs, between cells. This process significantly affects cancer cell dynamics, including their proliferation, migration, and invasion, while also contributing to drug resistance. Our review focuses on the crucial interactions between cancer cells and fibroblasts mediated by exosomes within the pancreatic cancer microenvironment. We delve into how exosomes from both cancer-associated fibroblasts and the cancer cells themselves drive tumor progression through various mechanisms, such as epithelial-mesenchymal transition and facilitating metastasis to specific organs like the lungs and liver. The potential of leveraging exosomes for therapeutic interventions is also explored, highlighting the importance of understanding their role in cell communication as a step forward in developing more effective pancreatic cancer treatments.
Lixus siculus Boheman 1835
Creators: name: Gültekin, Levent
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Lixus
Lixus siculus

description: Lixus siculus Boheman, 1835
Lixus siculus Boheman, 1835: 9
Current status: Lixus siculus Boheman, 1835 is a valid species.
Type. In Schoenherr’s collection at SMNH, under the name “ Siculus, Dejean, 8–9, Bhn.” is a male mounted on card and with aedeagus dissected; its left fore tibia completely and right funicle beyond the first segment are missing. It bears the handwritten label: “ L: siculus Dej., Sicilia, Chev.”, and fits description with type locality as Sicilia et Lycopolis Africae. It is here designated as lectotype with “ Lectotypus, 3, Lixus siculus Boh., Gültekin des. 2006”.
Remarks. This species is related to Lixus capiomonti Faust, 1883.
description: Published as part of Gültekin, Levent, 2010, Taxonomic remarks on some genera of Lixini Schoenherr, 1823 (Coleoptera: Curculionidae), pp. 1-21 in Zootaxa 2411 on page 10, DOI: 10.5281/zenodo.293282
Promecocoris (Promecocoris) laticollis
Creators: name: Ghahari, Hassan
name: Moulet, Pierre
name: Rider, David A.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Promecocoris
Promecocoris laticollis

description: Promecocoris (Promecocoris) laticollis (Jakovlev, 1885)
Promecosoma laticollis Jakovlev, 1885: 105.
Distribution in Iran. Golestan (Gapon 2007b), Mazandaran (Ghahari et al. 2011a). General distribution. Caucasus: Tadjikistan, Turkmenistan, Uzbekistan. Host plant. On Malva neglecta (Malvaceae) (Ghahari et al. 2011a).
description: Published as part of Ghahari, Hassan, Moulet, Pierre & Rider, David A., 2014, An annotated catalog of the Iranian Pentatomoidea (Hemiptera: Heteroptera: Pentatomomorpha), pp. 1-95 in Zootaxa 3837 (1) on page 76, DOI: 10.11646/zootaxa.3837.1.1, http://zenodo.org/record/286722
Detection of disease-specific signatures in B cell repertoires of lymphomas using machine learning
Creators: name: Schmidt-Barbo, Paul
name: Kalweit, Gabriel
name: Naouar, Mehdi
name: Paschold, Lisa
name: Willscher, Edith
name: Schultheiß, Christoph
name: Märkl, Bruno
name: Dirnhofer, Stefan
name: Tzankov, Alexandar
name: Binder, Mascha
name: Kalweit, Maria
Publisher: name: Universitäts- und Landesbibliothek Sachsen-Anhalt
Year: 2024
Subjects: subject: 610

description: The classification of B cell lymphomas—mainly based on light microscopy evaluation by a pathologist—requires many years of training. Since the B cell receptor (BCR) of the lymphoma clonotype and the microenvironmental immune architecture are important features discriminating different lymphoma subsets, we asked whether BCR repertoire next-generation sequencing (NGS) of lymphoma-infiltrated tissues in conjunction with machine learning algorithms could have diagnostic utility in the subclassification of these cancers. We trained a random forest and a linear classifier via logistic regression based on patterns of clonal distribution, VDJ gene usage and physico-chemical properties of the top-n most frequently represented clonotypes in the BCR repertoires of 620 paradigmatic lymphoma samples—nodular lymphocyte predominant B cell lymphoma (NLPBL), diffuse large B cell lymphoma (DLBCL) and chronic lymphocytic leukemia (CLL)—alongside with 291 control samples. With regard to DLBCL and CLL, the models demonstrated optimal performance when utilizing only the most prevalent clonotype for classification, while in NLPBL—that has a dominant background of non-malignant bystander cells—a broader array of clonotypes enhanced model accuracy. Surprisingly, the straightforward logistic regression model performed best in this seemingly complex classification problem, suggesting linear separability in our chosen dimensions. It achieved a weighted F1-score of 0.84 on a test cohort including 125 samples from all three lymphoma entities and 58 samples from healthy individuals. Together, we provide proof-of-concept that at least the 3 studied lymphoma entities can be differentiated from each other using BCR repertoire NGS on lymphoma-infiltrated tissues by a trained machine learning model.
Crenimugil heterocheilos
Creators: name: Andréfouët, Serge
name: Chen, Wei-Jen
name: Kinch, Jeff
name: Mana, Ralph
name: Russell, Barry C.
name: Tully, Dean
name: White, William T.
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Mugiliformes
Mugilidae
Crenimugil
Crenimugil heterocheilos

description: Crenimugil heterocheilos (Bleeker 1855) — Half fringelip mullet
Status at New Ireland. New record, based on specimens observed by Jeff Kinch during CFMDP Survey at Kavieng fish market in 2004–2005.
Distribution and habitat. New Ireland: 2.—General distribution: Indonesia and Philippines to Vanuatu, north to southern Japan, south to New Caledonia. Found in shallow coastal waters, entering lagoons, estuaries and rivers, 0–3 m depth. Freshwater, transitional water and marine.
description: Published as part of Andréfouët, Serge, Chen, Wei-Jen, Kinch, Jeff, Mana, Ralph, Russell, Barry C., Tully, Dean & White, William T., 2019, Checklist of the marine and estuarine fishes of New Ireland Province, Papua New Guinea, western Pacific Ocean, with 810 new records, pp. 1-360 in Zootaxa 4588 (1) on page 75, DOI: 10.11646/zootaxa.4588.1.1, http://zenodo.org/record/2988163
Phocidae Hernández-Orts, Viola, García, Crespo, González, García-Varela & Kuchta, 2015, s.s.
Creators: name: Hernández-Orts, Jesús S.
name: Viola, M. Natalia Paso
name: García, Néstor A.
name: Crespo, Enrique A.
name: González, Raúl
name: García-Varela, Martín
name: Kuchta, Roman
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Carnivora
Phocidae

description: Family Phocidae
Hydrurga leptonyx (de Blainville): A— Corynosoma australe, C. hamanni; N— Contracaecum sp.
Mirounga leonina (Linnaeus): A— Corynosoma australe; N— Contracaecum miroungae, C. ogmorhini s.s., C. osculatum s.l., Contracaecum sp., Pseudoterranova sp.
Leptonychotes weddellii (Lesson): A— Corynosoma hamanni.
description: Published as part of Hernández-Orts, Jesús S., Viola, M. Natalia Paso, García, Néstor A., Crespo, Enrique A., González, Raúl, García-Varela, Martín & Kuchta, Roman, 2015, A checklist of the helminth parasites of marine mammals from Argentina, pp. 301-334 in Zootaxa 3936 (3) on page 327, DOI: 10.11646/zootaxa.3936.3.1, http://zenodo.org/record/236696