cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
sj-docx-2-tej-10.1177_20417314231219280 – Supplemental material for Mesenchymal stem cells overexpressing XIST induce macrophage M2 polarization and improve neural stem cell homeostatic microenvironment, alleviating spinal cord injury
Creators: name: Zhu, Dan
name: Peng, Tie
name: Zhang, Zhenwang
name: Guo, Shuang
name: Su, Ying
name: Zhang, Kangwei
name: Wang, Jiawei
name: Liu, Chao
Publisher: name: SAGE Journals
Year: 2024
Subjects: Dentistry not elsewhere classified
Biological Sciences not elsewhere classified

description: Supplemental material, sj-docx-2-tej-10.1177_20417314231219280 for Mesenchymal stem cells overexpressing XIST induce macrophage M2 polarization and improve neural stem cell homeostatic microenvironment, alleviating spinal cord injury by Dan Zhu, Tie Peng, Zhenwang Zhang, Shuang Guo, Ying Su, Kangwei Zhang, Jiawei Wang and Chao Liu in Journal of Tissue Engineering
Active Uncertainty Reduction for Human-Robot Interaction: An Implicit Dual Control Approach
Creators: name: Hu, Haimin
name: Fisac, Jaime F.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Robotics (cs.RO)
subject: Machine Learning (cs.LG)
subject: Systems and Control (eess.SY)
subject: Optimization and Control (math.OC)
subject: FOS: Computer and information sciences
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: FOS: Mathematics

description: The ability to accurately predict human behavior is central to the safety and efficiency of robot autonomy in interactive settings. Unfortunately, robots often lack access to key information on which these predictions may hinge, such as people's goals, attention, and willingness to cooperate. Dual control theory addresses this challenge by treating unknown parameters of a predictive model as stochastic hidden states and inferring their values at runtime using information gathered during system operation. While able to optimally and automatically trade off exploration and exploitation, dual control is computationally intractable for general interactive motion planning, mainly due to the fundamental coupling between robot trajectory optimization and human intent inference. In this paper, we present a novel algorithmic approach to enable active uncertainty reduction for interactive motion planning based on the implicit dual control paradigm. Our approach relies on sampling-based approximation of stochastic dynamic programming, leading to a model predictive control problem that can be readily solved by real-time gradient-based optimization methods. The resulting policy is shown to preserve the dual control effect for a broad class of predictive human models with both continuous and categorical uncertainty. The efficacy of our approach is demonstrated with simulated driving examples.
description: Workshop on the Algorithmic Foundations of Robotics (WAFR) 2022
Runcinia Simon 1875
Creators: name: Li, Jian Yong
name: Liu, Jie
name: Chen, Jian
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Thomisidae
Runcinia

description: Genus Runcinia Simon, 1875 ǟẃNjHŔẂ
  Runcinia affinis Simon, 1897 ǟ ẃNjHŔ  Ş ♂
­­­­­­­­­­­­­­­ Africa, Bangladesh to Japan, Philippines, Java.
 Runcinia affinis Simon 1897: 292.
 Runcinia albostriata; Kim and Gwon 2001: 41, Namkung 2001: 540, 2003: 543, Kim and Cho 2002: 155, Kim and Lee 2012a: 40.
description: Published as part of Li, Jian Yong, Liu, Jie & Chen, Jian, 2015, Bibliographic checklist of Korean spiders (Arachnida: Araneae) ver. 2015, pp. 1-112 in Journal of Species Research 4 on page 84, DOI: 10.12651/JSR.2015.4, http://zenodo.org/record/13137482
Nonrelativistic strings and the limits of $ \mathcal{N}=2 $ dualities
Creators: name: Roychowdhury, Dibakar
Publisher: name: arXiv
Year: 2022
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We carry out the formulation of nonrelativistic (NR) F-string theory for $ \mathcal{N}=2 $ Gaiotto-Maldacena class of geometries in type IIA supergravity. Considering the NS-NS sector, we reduce the type IIA theory into the NR sigma models those are formulated over the nonrelativistic target space geometries known as the torsional String Newton-Cartan (TSNC) backgrounds. Using these TSNC data, we write down the sigma model action and explore several properties in the semiclassical limit. In particular, we carry out the \emph{canonical} analysis of the T-duality transformation rules in TSNC background. Following the standard canonical prescription of obtaining T-duality transformations, we map these TSNC sigma models to relativistic sigma models propagating over general relativity backgrounds. Finally, we conclude with a detailed discussion on the effects of adding \emph{flavour} branes and thereby taking the corresponding TSNC limit in the bulk description of $ \mathcal{N}=2 $ quivers. We compute various field theory observables in the nonrelativistic limit and outline the structure of the NR Lagrangian following the light cone reduction of $ \mathcal{N}=2 $ SYM theory.
description: v2 Accepted by JHEP
Continuous phase transition from a chiral spin state to collinear magnetic order in a zigzag chain with Kitaev interactions
Creators: name: Macedo, Rafael A.
name: Ramos, Flavia B.
name: Pereira, Rodrigo G.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: Quantum spin systems can break time reversal symmetry by developing spontaneous magnetization or spin chirality. However, collinear magnets and chiral spin states are invariant under different symmetries, implying that the order parameter of one phase vanishes in the other. We show how to construct one-dimensional anisotropic spin models that exhibit a "Landau-forbidden" continuous phase transition between such states. As a concrete example, we focus on a zigzag chain with bond-dependent exchange and six-spin interactions. Using a combination of exact solutions, effective field theories, and numerical simulations, we show that the transition between the chiral and magnetic phases has an emergent U(1) symmetry. The excitations governing the transition from the chiral phase can be pictured as mobile defects in a $\mathbb Z_2$ flux configuration which bind fermionic modes. We briefly discuss extensions to two dimensions and analogies with deconfined quantum criticality. Our results suggest new prospects for unconventional phase transitions involving chiral spin states.
description: 11 pages, 7 figures
Takachihoa Ono 1985
Creators: name: Li, Jian Yong
name: Liu, Jie
name: Chen, Jian
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Thomisidae
Takachihoa

description: Genus Takachihoa Ono, 1985 j나șȕNjHŔẂ
  Takachihoa truciformis (Bösenberg and Strand, 1906) j나șȕNjHŔ  Ş ♂
­­­­­­­­­­­­­­­ China, Korea, Taiwan, Japan.
 Oxyptila truciformis Bösenberg and Strand 1906: 259, Paik and Namkung 1979: 72.
 Takachihoa truciformis; Kim and Gwon 2001: 44, Namkung 2001: 530, 2003: 533, Kim and Lee 2012a: 44.
description: Published as part of Li, Jian Yong, Liu, Jie & Chen, Jian, 2015, Bibliographic checklist of Korean spiders (Arachnida: Araneae) ver. 2015, pp. 1-112 in Journal of Species Research 4 on page 84, DOI: 10.12651/JSR.2015.4, http://zenodo.org/record/13137482
sj-pdf-1-pec-10.1177_03010066231222473 - Supplemental material for Influence of the human body odor compound HMHA on face perception
Creators: name: Ferdenzi, Camille
name: Fournel, Arnaud
name: Baldovini, Nicolas
name: Poupon, Daphnée
name: Ligout, Déborah
name: Thévenet, Marc
name: Bouet, Romain
name: Bensafi, Moustafa
Publisher: name: SAGE Journals
Year: 2024
Subjects: subject: Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: Psychology not elsewhere classified
subject: Psychiatry (incl. Psychotherapy)

description: Supplemental material, sj-pdf-1-pec-10.1177_03010066231222473 for Influence of the human body odor compound HMHA on face perception by Camille Ferdenzi, Arnaud Fournel, Nicolas Baldovini, Daphnée Poupon, Déborah Ligout, Marc Thévenet, Romain Bouet and Moustafa Bensafi in Perception
Supplemental Material - Prevalence, Characteristics, and Outcomes of Infective Endocarditis Readmissions in Patients With Variables Associated With Liver Disease in the United States
Creators: name: Khayata, Mohamed
name: Grimm, Richard A.
name: Griffin, Brian P.
name: Xu, Bo
Publisher: name: SAGE Journals
Year: 2024
Subjects: Cardiology

description: Supplemental Material for Prevalence, Characteristics, and Outcomes of Infective Endocarditis Readmissions in Patients With Variables Associated With Liver Disease in the United States by Mohamed Khayata, MD, MPH, Richard A. Grimm, DO, Brian P. Griffin, MD, and Bo Xu, MD, FACC, FASE, FRACP in Angiology.
The mean and variance of the distribution of shortest path lengths of random regular graphs
Creators: name: Tishby, Ido
name: Biham, Ofer
name: Kühn, Reimer
name: Katzav, Eytan
Publisher: name: arXiv
Year: 2022
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: The distribution of shortest path lengths (DSPL) of random networks provides useful information on their large scale structure. In the special case of random regular graphs (RRGs), which consist of $N$ nodes of degree $c \ge 3$, the DSPL, denoted by $P(L=\ell)$, follows a discrete Gompertz distribution. Using the discrete Laplace transform we derive a closed-form expression for the moment generating function of the DSPL of RRGs. From the moment generating function we obtain closed-form expressions for the mean and variance of the DSPL. More specifically, we find that the mean distance between pairs of distinct nodes is given by $\langle L \rangle = \frac{\ln N}{\ln (c-1)} + \frac{1}{2} - \frac{ \ln c - \ln (c-2) +γ}{\ln (c-1)} + \mathcal{O} \left( \frac{\ln N}{N} \right)$, where $γ$ is the Euler-Mascheroni constant. While the leading term is known, this result includes a novel correction term, which yields very good agreement with the results obtained from direct numerical evaluation of $\langle L \rangle$ via the tail-sum formula and with the results obtained from computer simulations. However, it does not account for an oscillatory behavior of $\langle L \rangle$ as a function of $c$ or $N$. These oscillations are negligible in sparse networks but detectable in dense networks. We also derive an expression for the variance ${\rm Var}(L)$ of the DSPL, which captures the overall dependence of the variance on $c$ but does not account for the oscillations. The oscillations are due to the discrete nature of the shell structure around a random node. They reflect the profile of the filling of new shells as $N$ is increased. The results for the mean and variance are compared to the corresponding results obtained in other types of random networks. The relation between the mean distance and the diameter is discussed.
description: 25 pages, 7 figures
ALGORITIMLASH ASOSLARI BO'LIMINI O'QITISH METODIKASI
Creators: name: Mahmudova, Shohsanam
name: O'ktamov, Madadjon
Publisher: name: Zenodo
Year: 2025

description: Ushbu maqola “Algoritimlash asoslari bo‘limini o‘qitish  metodikasi “Algoritmlar - har qanday muammoni yechish uchun qadam-baqadam bajariladigan amallar ketma-ketligi bo‘lib, ular dasturlash va kompyuter fanlarining asosini tashkil etadi. Algoritmlash asoslarini o‘rgatish metodikasi, talabalarga algoritmlarni tushuntirish va ularni dasturlash tilida kodlashni o‘rgatishda muhim ahamiyatga ega. Ushbu bo‘limda algoritm tuzishning asosiy prinsiplariga, algoritmlarning to‘g‘ri ishlashini tekshirish metodlariga, va dasturlashning samarali usullariga alohida e'tibor qaratiladi.
Additional file 1 of ERASE: a feasible early warning tool for elder abuse, developed for use in the Dutch emergency department
Creators: name: van Houten, Miriam E.
name: Vloet, Lilian C. M.
name: Rikkert, Marcel G. M. Olde
name: van de Kerkhof-van Bon, Brigitte
name: de Rooij, Anneriek
name: Verhoeven, Marieke
name: Bil, Wilhelmina M. E.
name: Lucke, Jacinta A.
name: Schoon, Yvonne
name: Berben, Sivera A. A.
Publisher: name: figshare
Year: 2024
Subjects: Space Science
Medicine
Neuroscience
Biotechnology
Information Systems not elsewhere classified
Developmental Biology
Cancer
Science Policy
Mental Health

description: Additional file 1. Search strategy databases MEDLINE, Embase and CINAHL.
sj-pdf-1-mrj-10.1177_00222437231179186 - Supplemental material for Unveiling Stars: How Graphical Displays of Online Consumer Ratings Affect Consumer Perception and Judgment
Creators: name: Mousavi, Javad
name: Singh, Surendra N.
name: Chatterjee, Promothesh
name: Masters, Tamara
Publisher: name: SAGE Journals
Year: 2024
Subjects: Hospitality Management

description: Supplemental material, sj-pdf-1-mrj-10.1177_00222437231179186 for Unveiling Stars: How Graphical Displays of Online Consumer Ratings Affect Consumer Perception and Judgment by Javad Mousavi, Surendra N. Singh and
Promothesh Chatterjee, Tamara Masters in Journal of Marketing Research
Additional file 2 of ERASE: a feasible early warning tool for elder abuse, developed for use in the Dutch emergency department
Creators: name: van Houten, Miriam E.
name: Vloet, Lilian C. M.
name: Rikkert, Marcel G. M. Olde
name: van de Kerkhof-van Bon, Brigitte
name: de Rooij, Anneriek
name: Verhoeven, Marieke
name: Bil, Wilhelmina M. E.
name: Lucke, Jacinta A.
name: Schoon, Yvonne
name: Berben, Sivera A. A.
Publisher: name: figshare
Year: 2024
Subjects: Space Science
Medicine
Neuroscience
Biotechnology
Information Systems not elsewhere classified
Developmental Biology
Cancer
Science Policy
Mental Health

description: Additional file 2. Questionnaire respondents ERASE tool.
Additional file 3 of ERASE: a feasible early warning tool for elder abuse, developed for use in the Dutch emergency department
Creators: name: van Houten, Miriam E.
name: Vloet, Lilian C. M.
name: Rikkert, Marcel G. M. Olde
name: van de Kerkhof-van Bon, Brigitte
name: de Rooij, Anneriek
name: Verhoeven, Marieke
name: Bil, Wilhelmina M. E.
name: Lucke, Jacinta A.
name: Schoon, Yvonne
name: Berben, Sivera A. A.
Publisher: name: figshare
Year: 2024
Subjects: Space Science
Medicine
Neuroscience
Biotechnology
Information Systems not elsewhere classified
Developmental Biology
Cancer
Science Policy
Mental Health

description: Additional file 3. ERASE tool draft version.
Customization of Open Differential for EV Utility Vehicle
Creators: name: Dr.B.Vijaya Kumar, S.Pradeep, Ch.Vamshi, K.Shiva Kumar Reddy
Publisher: name: Zenodo
Year: 2024

description: The design and analysis of differential are crucial for amplifying the performance and durability of transmission system in utility vehicles. Differential, essential for power transmission and torque distribution, are usually made from Cast iron, valued for its strength and fracture resistance. However, the high weight of cast iron poses challenges in modern vehicle design, where reducing casing mass is necessary for improving fuel efficiency and vehicle dynamics. This project investigates the optimization of Differential design by exploring alternative materials, such as EN24,EN36 and 20MnCr5 Steel which offer significant weight reductions and durability without compromising performance
The evolution of turbulent galactic discs: gravitational instability, feedback and accretion
Creators: name: Ginzburg, Omri
name: Dekel, Avishai
name: Mandelker, Nir
name: Krumholz, Mark R.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We study the driving of turbulence in star-froming disc galaxies of different masses at different epochs, using an analytic "bathtub" model. The disc of gas and stars is assumed to be in marginal Toomre instability. Turbulence is assumed to be sustained via an energy balance between its dissipation and three simultaneous energy sources. These are stellar feedback, inward transport due to disc instability and clumpy accretion via streams. The transport rate is computed with two different formalisms, with similar results. To achieve the energy balance, the disc self-regulates either the mass fraction in clumps or the turbulent viscous torque parameter. In this version of the model, the efficiency by which the stream kinetic energy is converted into turbulence is a free parameter, $ξ_a$. We find that the contributions of the three energy sources are in the same ball park, within a factor of $\sim\!2$ in all discs at all times. In haloes that evolve to a mass $\leq 10^{12}\,\Msun$ by $z=0$ ($\leq 10^{11.5}\,\Msun$ at $z\!\sim\!2$), feedback is the main driver throughout their lifetimes. Above this mass, the main driver is either transport or accretion for very low or very high values of $ξ_a$, respectively. For an assumed $ξ_a(t)$ that declines in time, galaxies in halos with present-day mass $>\!10^{12}$ M$_\odot$ make a transition from accretion to transport dominance at intermediate redshifts, $z\! \sim\!3$, when their mass was $\geq\!10^{11.5}\,\Msun$. The predicted relation between star-formation rate and gas velocity dispersion is consistent with observations.
description: 17 pages, 6 figures. Accepted for publication in MNRAS
statsTeachR
Creators: name: Reich, Nicholas
name: Foulkes, Andrea
name: Blatt, Harrel
name: Cohen, Eric
name: Matthews, Gregory
Publisher: name: QUBES Educational Resources
Year: 2018

description: statsTeachR is an open-access, online repository of modular lesson plans, a.k.a. "modules", for teaching statistics using R at the undergraduate and graduate level.
Additional file 4 of ERASE: a feasible early warning tool for elder abuse, developed for use in the Dutch emergency department
Creators: name: van Houten, Miriam E.
name: Vloet, Lilian C. M.
name: Rikkert, Marcel G. M. Olde
name: van de Kerkhof-van Bon, Brigitte
name: de Rooij, Anneriek
name: Verhoeven, Marieke
name: Bil, Wilhelmina M. E.
name: Lucke, Jacinta A.
name: Schoon, Yvonne
name: Berben, Sivera A. A.
Publisher: name: figshare
Year: 2024
Subjects: Space Science
Medicine
Neuroscience
Biotechnology
Information Systems not elsewhere classified
Developmental Biology
Cancer
Science Policy
Mental Health

description: Additional file 4. Multiple choice & Free text answers questionnaire ERASE tool.
Choice modelling and the benefit transfer of natural resource values in the Fitzroy basin
Creators: name: Loch, Adam J.
Publisher: name: CQUniversity
Year: 2022
Subjects: subject: 140205 Environment and Resource Economics
subject: FOS: Economics and business

description: There are times when there is a need to be able to place a monetary value on amenities or goods that are not traded or made available to the public through market structures. This process is known as non -market valuation. Non-market amenities are intertwined with the use, reform and allocation of water resources in the Fitzroy Basin, Central Queensland. Issues that cause amenity changes need to be assessed with non -market valuation techniques.
 In this thesis a stated preference valuation technique called choice modelling is applied in order to derive monetary values for tradeoffs associated with options for floodplain development in the Fitzroy. It is then shown that the estimated values for the Basin as a whole can be transferable across different sub -catchment sites and populations within the Fitzroy Basin. In addition, it is reported herein that issues such as scale and quantity effects (sometimes known together as scope effects) do not have any significant impact on the value estimates.
 This thesis outlines the process undertaken to estimate the required values including identification of catchment social and environmental issues, survey design and benefit transfer issues. Research findings are reported on site and population equivalence and the presence and effects (if any) of scale and quantity effects. Possible directions for further research are also examined.
Assessment of iridoids and their similar structures as antineoplastic drugs by in silico approach
Creators: name: Neupane, Prabhat
name: Subin, Jhashanath Adhikari
name: Adhikari, Rameshwar
Publisher: name: Taylor & Francis
Year: 2024
Subjects: Biophysics
Biochemistry
Molecular Biology
Pharmacology
Biotechnology
Chemical Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Cancer

description: Iridoids commonly found in plants as secondary metabolites have been reported to possess significant biological activities such as anticancer, antioxidant, hypoglycemic, antimicrobial etc. The strong interactions of iridoids with cyclic-dependent kinase 8 (CDK8) protein could show inhibitory effects that could modulate tumour growth. From the molecular docking calculations, some iridoids interacted effectively with the target CDK8 protein (PDB ID: 5ICP) with better binding affinities of −9.1, −9.0, −9.0, −8.9 kcal/mol, than that observed for the native ligand with −8.7 kcal/mol and for the reference compound gemcitabine with −6.9 kcal/mol. The GI50 values (<5 μM) obtained from graph-based signatures showed activity in breast, colon, leukaemia, and renal cancer cell lines. The IC50 predictions as CDK2 inhibitors were greater than 10 µM with type I non-allosteric binding mode. The stability analysis of protein-ligand complex from 125 ns long molecular dynamics simulations showed moderately smooth trajectories and RSMD value around 5 Å for the docked ligands. The binding free energy changes up to −47.65 ± 5.97 kcal/mol from MMGBSA method and −30.33 ± 5.40 kcal/mol from MMPBSA method hinted at the spontaneous nature of the complex formation. Furthermore, geometrical evaluators like RMSF, Rg, SASA, and hydrogen bond count also corroborated with the structural stability of the complexes and the capacity of hit molecules to inhibit the target, indicating its therapeutic potential against cancer. The toxicity and drug-likeness from ADMET predictions suggested experimental verification and that the proposed candidates could be employed for further trials in the development of safer and more effective anticancer drugs.
Topology optimization of 3D flow fields for flow batteries
Creators: name: Lin, Tiras Y.
name: Baker, Sarah E.
name: Duoss, Eric B.
name: Beck, Victor A.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: As power generated from renewables becomes more readily available, the need for power-efficient energy storage devices, such as redox flow batteries, becomes critical for successful integration of renewables into the electrical grid. An important component in a redox flow battery is the planar flow field, which is usually composed of two-dimensional channels etched into a backing plate. As reactant-laden electrolyte flows into the flow battery, the channels in the flow field distribute the fluid throughout the reactive porous electrode. We utilize topology optimization to design flow fields with full three-dimensional geometry variation, i.e., 3D flow fields. Specifically, we focus on vanadium redox flow batteries and use the optimization algorithm to generate 3D flow fields evolved from standard interdigitated flow fields by minimizing the electrical and flow pressure power losses. To understand how these designs improve performance, we analyze the polarization of the reactant concentration and exchange current within the electrode to highlight how the designed flow fields mitigate the presence of electrode dead zones. While interdigitated flow fields can be heuristically engineered to yield high performance by tuning channel and land dimensions, such a process can be tedious; this work provides a framework for automating that design process.
Additional file 5 of ERASE: a feasible early warning tool for elder abuse, developed for use in the Dutch emergency department
Creators: name: van Houten, Miriam E.
name: Vloet, Lilian C. M.
name: Rikkert, Marcel G. M. Olde
name: van de Kerkhof-van Bon, Brigitte
name: de Rooij, Anneriek
name: Verhoeven, Marieke
name: Bil, Wilhelmina M. E.
name: Lucke, Jacinta A.
name: Schoon, Yvonne
name: Berben, Sivera A. A.
Publisher: name: figshare
Year: 2024
Subjects: Space Science
Medicine
Neuroscience
Biotechnology
Information Systems not elsewhere classified
Developmental Biology
Cancer
Science Policy
Mental Health

description: Additional file 5. ERASE tool draft version including comments.
Fingering Instability of Active Nematic Droplets
Creators: name: Alert, Ricard
Publisher: name: arXiv
Year: 2022
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Biological Physics (physics.bio-ph)
subject: FOS: Physical sciences

description: From the mitotic spindle up to tissues and biofilms, many biological systems behave as active droplets, which often break symmetry and change shape spontaneously. Here, I show that active nematic droplets can experience a fingering instability. I consider an active fluid that acquires nematic order through anchoring at the droplet interface, and I predict its morphological stability in terms of three dimensionless parameters: the anchoring angle, the penetration length of nematic order compared to droplet size, and an active capillary number. Droplets with extensile (contractile) stresses and planar (homeotropic) anchoring are unstable above a critical activity or droplet size. This instability is interfacial in nature: It arises through the coupling of active flows with interface motion, even when the bulk instability of active nematics cannot take place. In contrast to the dynamic states characteristic of active matter, the instability could produce static fingering patterns. The number of fingers increases with activity but varies non-monotonically with the nematic penetration length. Overall, these results can help to understand the self-organized shapes of biological systems, and to design patterns in active materials.
description: Invited article for the Special Issue "Emerging Talents 2021" of J. Phys. A
Additional file 1 of Updated reference values for static lung volumes from a healthy population in Austria
Creators: name: Mraz, Tobias
name: Asgari, Shervin
name: Karimi, Ahmad
name: Breyer, Marie-Kathrin
name: Hartl, Sylvia
name: Sunanta, Owat
name: Ofenheimer, Alina
name: Burghuber, Otto C.
name: Zacharasiewicz, Angela
name: Lamprecht, Bernd
name: Schiffers, Caspar
name: Wouters, Emiel F. M.
name: Breyer-Kohansal, Robab
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Additional file 1. Mean predicted lung volumes males
PEDF inhibits VEGF-induced vascular leakage through binding to VEGFR2 in acute myocardial infarction
Creators: name: Hui, Hong-Liang
name: Jiang, Bo
name: Zhou, Yan-Ying
name: Qiu, Fan
name: Lin, Yan-Gui
name: Li, Hua-Ming
name: Li, Dan
name: Luo, Min
name: Miao, Hao-Ran
name: Ong, Sang-Bing
name: Zhang, Yi-Qian
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Pigment epithelium-derived factor (PEDF) could bind to vascular endothelial growth factor receptor 2 (VEGFR2) and inhibit its activation induced by VEGF. But how PEDF affects VEGFR2 pathway is still poorly understood. In this study, we elucidated the precise mechanism underlying the interaction between PEDF and VEGFR2, and subsequently corroborated our findings using a rat AMI model. PEDF prevented endocytosis of VE-cadherin induced by hypoxia, thereby protecting the endothelium integrity. A three-dimensional model of the VEGFR2-PEDF complex was constructed by protein-protein docking method. The results showed that the VEGFR2-PEDF complex was stable during the simulation. Hydrogen bonds, binding energy and binding modes were analyzed during molecular dynamics simulations, which indicated that hydrogen bonds and hydrophobic interactions were important for the recognition of VEGFR2 with PEDF. In addition, the results from exudation of fibrinogen suggested that PEDF inhibits vascular leakage in acute myocardial infarction and confirmed the critical role of key amino acids in the regulation of endothelial cell permeability. This observation is also supported by echocardiography studies showing that the 34mer peptide sustained cardiac function during acute myocardial infarction. Besides, PEDF and 34mer could inhibit the aggregation of myofiber in the heart and promoted the formation of a dense cell layer in cardiomyocytes, which suggested that PEDF and 34mer peptide protect against AMI-induced cardiac dysfunction. These results suggest that PEDF inhibits the phosphorylation of downstream proteins, thereby preventing vascular leakage, which provides a new therapeutic direction for the treatment of acute myocardial infarction.
Gas Adsorption and Diffusion Behaviors in Interfacial Systems Composed of a Polymer of Intrinsic Microporosity and Amorphous Silica: A Molecular Simulation Study
Creators: name: Yoshimoto, Yuta
name: Tomita, Yuiko
name: Sato, Kohei
name: Higashi, Shiori
name: Yamato, Masafumi
name: Takagi, Shu
name: Kawakami, Hiroyoshi
name: Kinefuchi, Ikuya
Publisher: name: arXiv
Year: 2022
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences
subject: 74E30, 82D60

description: We investigate the adsorption and diffusion behaviors of CO2, CH4, and N2 in interfacial systems composed of a polymer of intrinsic microporosity (PIM-1) and amorphous silica using grand canonical Monte Carlo (GCMC) and molecular dynamics (MD) simulations. We build model systems of mixed matrix membranes (MMMs) with PIM-1 chains sandwiched between silica surfaces. Gas adsorption analysis using GCMC simulations shows that gas molecules are preferentially adsorbed in microcavities distributed near silica surfaces, resulting in an increase in the solubility coefficients of CO2, CH4, and N2 compared to bulk PIM-1. In contrast, diffusion coefficients obtained from MD simulations and then calibrated using the dual-mode sorption model show different tendencies depending on gas species: CO2 diffusivity decreases in MMMs compared to PIM-1, whereas CH4 and N2 diffusivities increase. These differences are attributed to competing effects of silica surfaces: the emergence of larger pores as a result of chain packing disruption, which enhances gas diffusion, and a quadrupole-dipole interaction between gas molecules and silica surface hydroxyl groups, which retards gas diffusion. The former has a greater impact on CH4 and N2 diffusivities, whereas the latter has a greater impact on CO2 diffusivity due to the strong quadrupole-dipole interaction between CO2 and surface hydroxyls. These findings add to our understanding of gas adsorption and diffusion behaviors in the vicinity of PIM-1/silica interfaces, which are unobtainable in experimental studies.
description: 65 pages, 13 figures
Energetic cost of measurements using quantum, coherent, and thermal light
Creators: name: Linpeng, Xiayu
name: Bresque, Léa
name: Maffei, Maria
name: Jordan, Andrew N.
name: Auffèves, Alexia
name: Murch, Kater W.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Quantum Physics (quant-ph)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: Quantum measurements are basic operations that play a critical role in the study and application of quantum information. We study how the use of quantum, coherent, and classical thermal states of light in a circuit quantum electrodynamics setup impacts the performance of quantum measurements, by comparing their respective measurement backaction and measurement signal to noise ratio per photon. In the strong dispersive limit, we find that thermal light is capable of performing quantum measurements with comparable efficiency to coherent light, both being outperformed by single-photon light. We then analyze the thermodynamic cost of each measurement scheme. We show that single-photon light shows an advantage in terms of energy cost per information gain, reaching the fundamental thermodynamic cost.
description: 15 pages, 7 figures
Inhibition of NS2B-NS3 protease from all four serotypes of dengue virus by punicalagin, punicalin and ellagic acid identified from Punica granatum
Creators: name: Ismat, Fouzia
name: Tariq, Anam
name: Shaheen, Aqsa
name: Ullah, Raheem
name: Raheem, Kayode
name: Muddassar, Muhammad
name: Mahboob, Sadia
name: Abbas, Wasim
name: Iqbal, Mazhar
name: Rahman, Moazur
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Biochemistry
subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology
subject: Computational Biology

description: Despite a major threat to the public health in tropical and subtropical regions, dengue virus (DENV) infections are untreatable. Therefore, efforts are needed to investigate cost-effective therapeutic agents that could cure DENV infections in future. The NS2B-NS3 protease encoded by the genome of DENV is considered a critical target for the development of anti-dengue drugs. The objective of the current study was to find out a specific inhibitor of the NS2B-NS3 proteases from all four serotypes of DENV. To begin with, nine plant extracts with a medicinal history were evaluated for their role in inhibiting the NS2B-NS3 proteases by Fluorescence Resonance Energy Transfer (FRET) assay. Among the tested extracts, Punica granatum was found to be the most effective one. The metabolic profiling of this extract revealed the presence of several active compounds, including ellagic acid, punicalin and punicalagin, which are well-established antiviral agents. Further evaluation of IC50 values of these three antiviral molecules revealed punicalagin as the most potent anti-NS2B-NS3 protease drug with IC50 of 0.91 ± 0.10, 0.75 ± 0.05, 0.42 ± 0.03, 1.80 ± 0.16 µM against proteases from serotypes 1, 2, 3 and 4, respectively. The docking studies demonstrated that these compounds interacted at the active site of the enzyme, mainly with His and Ser residues. Molecular dynamics simulations analysis also showed the structural stability of the NS2B-NS3 proteases in the presence of punicalagin. In summary, this study concludes that the punicalagin can act as an effective inhibitor against NS2B-NS3 proteases from all four serotypes of DENV.
Additional file 2 of Updated reference values for static lung volumes from a healthy population in Austria
Creators: name: Mraz, Tobias
name: Asgari, Shervin
name: Karimi, Ahmad
name: Breyer, Marie-Kathrin
name: Hartl, Sylvia
name: Sunanta, Owat
name: Ofenheimer, Alina
name: Burghuber, Otto C.
name: Zacharasiewicz, Angela
name: Lamprecht, Bernd
name: Schiffers, Caspar
name: Wouters, Emiel F. M.
name: Breyer-Kohansal, Robab
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Additional file 2. Mean predicted lung volumes females
Liouvillian Skin Effect in an Exactly Solvable Model
Creators: name: Yang, Fan
name: Jiang, Qing-Dong
name: Bergholtz, Emil J.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Quantum Physics (quant-ph)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Quantum Gases (cond-mat.quant-gas)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: The interplay between dissipation, topology and sensitivity to boundary conditions has recently attracted tremendous amounts of attention at the level of effective non-Hermitian descriptions. Here we exactly solve a quantum mechanical Lindblad master equation describing a dissipative topological Su-Schrieffer-Heeger (SSH) chain of fermions for both open boundary condition (OBC) and periodic boundary condition (PBC). We find that the extreme sensitivity on the boundary conditions associated with the non-Hermitian skin effect is directly reflected in the rapidities governing the time evolution of the density matrix giving rise to a Liouvillian skin effect. This leads to several intriguing phenomena including boundary sensitive damping behavior, steady state currents in finite periodic systems, and diverging relaxation times in the limit of large systems. We illuminate how the role of topology in these systems differs in the effective non-Hermitian Hamiltonian limit and the full master equation framework.
description: 21 pages, 13 figures, published
Thermodynamics-informed graph neural networks
Creators: name: Hernández, Quercus
name: Badías, Alberto
name: Chinesta, Francisco
name: Cueto, Elías
Publisher: name: arXiv
Year: 2022
Subjects: subject: Machine Learning (cs.LG)
subject: Computational Engineering, Finance, and Science (cs.CE)
subject: Dynamical Systems (math.DS)
subject: FOS: Computer and information sciences
subject: FOS: Mathematics

description: In this paper we present a deep learning method to predict the temporal evolution of dissipative dynamic systems. We propose using both geometric and thermodynamic inductive biases to improve accuracy and generalization of the resulting integration scheme. The first is achieved with Graph Neural Networks, which induces a non-Euclidean geometrical prior with permutation invariant node and edge update functions. The second bias is forced by learning the GENERIC structure of the problem, an extension of the Hamiltonian formalism, to model more general non-conservative dynamics. Several examples are provided in both Eulerian and Lagrangian description in the context of fluid and solid mechanics respectively, achieving relative mean errors of less than 3% in all the tested examples. Two ablation studies are provided based on recent works in both physics-informed and geometric deep learning.
description: 14 pages, 11 figures
КРИОКОНСЕРВАЦИЯ ПОЛОВЫХ КЛЕТОК САМЦОВ – КАК МЕТОД СОХРАНЕНИЯ ГЕНОФОНДА  СЕЛЬСКОХОЗЯЙСТВЕННЫХ ЖИВОТНЫХ
Creators: name: Абдурасулов А.Х., Кыдырмаев А.К.
Publisher: name: Северо-Кавказский федеральный научный аграрный центр
Year: 2018

description: С целью сохранения и совершенствование генофонда сельскохозяйственных. животных на элевере Биотехнологического центра Кыргызского НИИ животноводства и пастбищ приучены к садке на искусственную вагину 10 быков-производителей и 6 баранов-производителей. Получено 1430,5 мл спермопродукции от быков и 168,0 от баранов, с активностью свежеполученного семени соответственно 6,7 и 7,85 баллов. Всего заморожено от быков-производителей различных пород 15955 спермодоз, в том числе 11740 в соломинках и 4215 в гранулях, от баранов 4667 спермодоз с активности после размораживания 3-4-4,3 баллов
EHTIMOLLAR NAZARIYASI VA TASODIFIY HODISALAR
Creators: name: Abdinazarov, Asadbek
name: Musirmanov, Shohboz
Publisher: name: Zenodo
Year: 2025

description: Maqolada ehtimollar nazariyasi va tasodifiy hodisalarning asosiy tamoyillari, nazariy jihatlari hamda ularning amaliy qo‘llanilish yo‘nalishlari ko‘rib chiqiladi. Ehtimollar nazariyasi fanining iqtisodiyot, tibbiyot, muhandislik va sun’iy intellekt sohalaridagi ahamiyati yoritiladi. Tadqiqotda asosiy matematik modellar va usullar tahlil qilinib, turli sohalarda qo‘llanilishi misollar bilan bayon etiladi.
ЖИВОТНОВОДСТВО КЫРГЫЗСКОЙ РЕСПУБЛИКИ: СОСТОЯНИЕ И ПЕРСПЕКТИВЫ
Creators: name: Абдурасулов А.Х., Мамаев С.Ш.
Publisher: name: Северо-Кавказский федеральный научный аграрный центр
Year: 2018

description: Животноводство является одной из ведущих отраслей сельского хозяйства, на долю животноводства приходится до 40% валовой продукции сельского хозяйства. Разведению сельскохозяйственных животных в республике благоприятствуют природно-климатические условия и социальные факторы производства его продукции. Цель исследования – изучение состояние животноводство и перспективы ее развития. В племенных субъектах на данное время содержаться: крупного рогатого скота 10383 голов, лошадей 3357, яков 3090, овец 49814, коз 2897, свиней 6046 голов и птиц—130013 голов.
Krylov complexity in saddle-dominated scrambling
Creators: name: Bhattacharjee, Budhaditya
name: Cao, Xiangyu
name: Nandy, Pratik
name: Pathak, Tanay
Publisher: name: arXiv
Year: 2022
Subjects: subject: Quantum Physics (quant-ph)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: In semi-classical systems, the exponential growth of the out-of-timeorder correlator (OTOC) is believed to be the hallmark of quantum chaos. However,on several occasions, it has been argued that, even in integrable systems, OTOC can grow exponentially due to the presence of unstable saddle points in the phase space. In this work, we probe such an integrable system exhibiting saddle dominated scrambling through Krylov complexity and the associated Lanczos coefficients. In the realm of the universal operator growth hypothesis, we demonstrate that the Lanczos coefficients follow the linear growth, which ensures the exponential behavior of Krylov complexity at early times. The linear growth arises entirely due to the saddle, which dominates other phase-space points even away from itself. Our results reveal that the exponential growth of Krylov complexity can be observed in integrable systems with saddle-dominated scrambling and thus need not be associated with the presence of chaos.
description: v3: few typos corrected, published version in JHEP
СОРГО ДЛЯ ВОЗДЕЛЫВАНИЯ НА ЗЕЛЕНЫЙ КОРМ И СИЛОС
Creators: name: С.А. Кузьминов, А.Б. Володин
Publisher: name: Северо-Кавказский федеральный научный аграрный центр
Year: 2018

description: В Центральном Предкавказье успех современного животноводства зависит от создания прочной кормовой базы. Создать ее можно за счет как однолетних так и многолетних видов кормовых растений. В условиях засушливого климата исключительно важное значение имеет возделывание сорго сахарного. Сорго относится к числу самых засухоустойчивых культур, отлично переносит почвенную и воздушную засуху, произрастает на песчаных и засоленых почвах, обеспечивая животноводство сочными зелеными кормами с середины июля и до наступления первых заморозков. Зеленая масса используется для приготовления силоса, сенажа, гранул, сена. Главным условием успеха возделывания сахарного сорго является использование новых, хорошо приспособленных к местным почвенно климатическим условиям сортов и гибридов. В ФГБНУ «Северо-Кавказский ФНАЦ» в результате селекционной работы созданы новый сорт Галия и гибриды Алга и Ярик. Результаты конкурсного и производственного испытания показали, что по урожаю зеленой массы и сухого вещества сорт Галия превзошел, стандартный сорт Ставропольское 36 на 8-11%, а гибриды Алга и Ярик стандартный гибрид Силосное 88 соответственно на 20-31% и 45-52% Новые сорт и гибриды кроме того обладают комплексом положительных хозяйственно-биологических признаков: высокое качество зеленой массы, за счет повышенного содержания протеина и сахаров, устойчивость к полеганию, болезням и вредителям.
Carrhotus Thorell 1891
Creators: name: Li, Jian Yong
name: Liu, Jie
name: Chen, Jian
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Salticidae
Carrhotus

description: Genus Carrhotus Thorell, 1891 ỂflŜḁHŔẂ
  Carrhotus xanthogramma (Latreille, 1819) ỂflŜḁHŔ  Ş ♂
­­­­­­­­­­­­­­­ Palearctic.
 Salticus xanthogramma Latreille 1819: 247.
 Carrhotus xanthogramma; Seo 1999a: 107, Namkung 2001: 558, 2003: 562, Cho and Kim 2002: 92, Kim and Cho 2002: 94, Kim and Lee 2014: 61.
description: Published as part of Li, Jian Yong, Liu, Jie & Chen, Jian, 2015, Bibliographic checklist of Korean spiders (Arachnida: Araneae) ver. 2015, pp. 1-112 in Journal of Species Research 4 on page 87, DOI: 10.12651/JSR.2015.4, http://zenodo.org/record/13137482
Modified Poisson-Boltzmann theory for polyelectrolytes in monovalent salt solutions with finite-size ions
Creators: name: Vahid, Hossein
name: Scacchi, Alberto
name: Yang, Xiang
name: Ala-Nissila, Tapio
name: Sammalkorpi, Maria
Publisher: name: arXiv
Year: 2022
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: We present a soft-potential-enhanced Poisson-Boltzmann (SPB) theory to efficiently capture ion distributions and electrostatic potential around rodlike charged macromolecules. The SPB model is calibrated with a coarse-grained particle-based model for polyelectrolytes (PEs) in monovalent salt solutions as well as compared to a full atomistic molecular dynamics simulations with explicit solvent. We demonstrate that our modification enables the SPB theory to accurately predict monovalent ion distributions around a rodlike PE in a wide range of ion and charge distribution conditions in the weak-coupling regime. These include excess salt concentrations up to 1 M, and ion sizes ranging from small ions, such as Na or Cl, to softer and larger ions with size comparable to the PE diameter. The work provides a simple way to implement an enhancement that effectively captures the influence of ion size and species into the PB theory in the context of PEs in aqueous salt solutions.
Additional file 2 of Mesothelin promotes brain metastasis of non-small cell lung cancer by activating MET
Creators: name: Xia, Shengkai
name: Duan, Wenzhe
name: Xu, Mingxin
name: Li, Mengqi
name: Tang, Mengyi
name: Wei, Song
name: Lin, Manqing
name: Li, Encheng
name: Liu, Wenwen
name: Wang, Qi
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Hematology

description: Supplementary Material 2.
sj-docx-3-jbm-10.1177_03936155221132291 - Supplemental material for A software-assisted untargeted liquid chromatography–mass spectrometry method for lipidomic profiling of human plasma samples
Creators: name: Segrado, Francesco
name: Cavalleri, Adalberto
name: Cantalupi, Alice
name: Mariani, Luigi
name: Dagnino, Sonia
name: Krogh, Vittorio
name: Venturelli, Elisabetta
name: Agnoli, Claudia
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 111299 Oncology and Carcinogenesis not elsewhere classified
subject: FOS: Clinical medicine

description: Supplemental material, sj-docx-3-jbm-10.1177_03936155221132291 for A software-assisted untargeted liquid chromatography–mass spectrometry method for lipidomic profiling of human plasma samples by Francesco Segrado, Adalberto Cavalleri, Alice Cantalupi, Luigi Mariani, Sonia Dagnino, Vittorio Krogh, Elisabetta Venturelli and Claudia Agnoli in The International Journal of Biological Markers
Green's function formulation of quantum defect embedding theory
Creators: name: Sheng, Nan
name: Vorwerk, Christian
name: Govoni, Marco
name: Galli, Giulia
Publisher: name: arXiv
Year: 2022
Subjects: subject: Quantum Physics (quant-ph)
subject: Materials Science (cond-mat.mtrl-sci)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences

description: We present a Green's function formulation of the quantum defect embedding theory (QDET) where a double counting scheme is rigorously derived within the $G_0 W_0$ approximation. We then show the robustness of our methodology by applying the theory with the newly derived scheme to several defects in diamond. Additionally, we discuss a strategy to obtain converged results as a function of the size and composition of the active space. Our results show that QDET is a promising approach to investigate strongly correlated states of defects in solids.