Additional file 1 of Nutrition-wide association study of microbiome diversity and composition in colorectal cancer patients
Creators: name: Hoang, Tung
name: Kim, Min Jung
name: Park, Ji Won
name: Jeong, Seung-Yong
name: Lee, Jeeyoo
name: Shin, Aesun
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified

description: Additional file 1: Figure S1. Scree plot for variance of food groups explained by dietary patterns. Figure S2. Gaussian graphical model networks for pairwise correlations of relative abundances of phyla in (A) low fruit-vegetable and (B) high fruit/low meat-poultry groups. Nodes reflect phylum, and edges reflect the conditional dependencies between phyla. The size of the circles is proportional to the mean relative abundance of the corresponding phylum. Green lines show positive partial correlations, and red lines show negative partial correlations. The thickness of edges represents the strength of correlations. Figure S3. Gaussian graphical model networks for pairwise correlations of relative abundances of classes in (A) low fruit-vegetable and (B) high fruit/low meat-poultry dietary groups. Nodes reflect phylum, and edges reflect the conditional dependencies between classes. The size of the circles is proportional to the mean relative abundance of the corresponding class. Green lines show positive partial correlations, and red lines show negative partial correlations. The thickness of edges represents the strength of correlations. Figure S4. Gaussian graphical model networks for pairwise correlations of relative abundances of orders in A) low fruit-vegetable and (B) high fruit/low meat-poultry dietary groups. Nodes reflect phylum, and edges reflect the conditional dependencies between classes. The size of the circles is proportional to the mean relative abundance of the corresponding order. Green lines show positive partial correlations, and red lines show negative partial correlations. The thickness of edges represents the strength of correlations. Figure S5. Gaussian graphical model networks for pairwise correlations of relative abundances of families in A) low fruit-vegetable and (B) high fruit/low meat-poultry dietary groups. Nodes reflect phylum, and edges reflect the conditional dependencies between families. The size of the circles is proportional to the mean relative abundance of the corresponding family. Green lines show positive partial correlations, and red lines show negative partial correlations. The thickness of edges represents the strength of correlations. Figure S6. Gaussian graphical model networks for pairwise correlations of relative abundances of genera in A) low fruit-vegetable and (B) high fruit/low meat-poultry dietary groups. Nodes reflect phylum, and edges reflect the conditional dependencies between genera. The size of the circles is proportional to the mean relative abundance of the corresponding genus. Green lines show positive partial correlations, and red lines show negative partial correlations. The thickness of edges represents the strength of correlations.