cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Genetic Deletion of IL (Interleukin)-19 Exacerbates Atherogenesis in Il19−−×Ldlr−− Double Knockout Mice by Dysregulation of mRNA Stability Protein HuR (Human antigen R).pdf
Creators: name: Mitali Ray
name: Gabunia, Khatuna
name: Vrakas, Christine N.
name: Herman, Allison B.
name: Kako, Farah
name: Kelemen, Sheri E.
name: Grisanti, Laurel A.
name: Autieri, Michael V.
Publisher: name: Health Research Alliance
Year: 2019
Subjects: subject: 110201 Cardiology (incl. Cardiovascular Diseases)
subject: FOS: Clinical medicine

description: Objective—To test the hypothesis that loss of IL (interleukin)-19 exacerbates atherosclerosis.
Approach and Results—Il19−/− mice were crossed into Ldlr−/− (low-density lipoprotein receptor knock out) mice. Double
knockout (dKO) mice had increased plaque burden in aortic arch and root compared with Ldlr−/− controls after 14 weeks
of high-fat diet (HFD). dKO mice injected with 10 ng/g per day rmIL-19 had significantly less plaque compared with
controls. qRT-PCR and Western blot analysis revealed dKO mice had increased systemic and intraplaque polarization of T
cells and macrophages to proinflammatory Th1 and M1 phenotypes, and also significantly increased TNF (tumor necrosis
factor)-α expression in spleen and aortic arch compared with Ldlr−/− controls. Bone marrow transplantation suggests
that immune cells participate in IL-19 protection. Bone marrow-derived macrophages and vascular smooth muscle cells
isolated from dKO mice had a significantly greater expression of inflammatory cytokine mRNA and protein compared
with controls. Spleen and aortic arch from dKO mice had significantly increased expression of the mRNA stability
protein HuR (human antigen R). Bone marrow-derived macrophage and vascular smooth muscle cell isolated from dKO
mice also had greater HuR abundance. HuR stabilizes proinflammatory transcripts by binding AU-rich elements in the
3′ untranslated region. Cytokine and HuR mRNA stability were increased in dKO bone marrow-derived macrophage
and vascular smooth muscle cell, which was rescued by addition of IL-19 to these cells. IL-19–induced expression of
miR133a, which targets and reduced HuR abundance; miR133a levels were lower in dKO mice compared with controls.
Conclusions—These data indicate that IL-19 is an atheroprotective cytokine which decreases the abundance of HuR,
leading to reduced inflammatory mRNA stability.
Leukocyte-Expressed beta2AR Are Essential for Survival After Acute Myocardial Injury.pdf
Creators: name: Grisanti, Laurel A.
name: Gumpert, Anna M.
name: Traynham, Christopher J.
name: Gorsky, Joshua E.
name: Repas, Ashley A.
name: Erhe Gao
name: Carter, Rhonda L.
name: Calvert, John W.
name: Garcia, Andres Pun
name: Ibanez, Borja
name: Rabinowitz, Joseph E.
name: Koch, Walter J.
name: Tilley, Douglas G.
Publisher: name: Health Research Alliance
Year: 2019
Subjects: subject: 110201 Cardiology (incl. Cardiovascular Diseases)
subject: FOS: Clinical medicine

description: Background: Immune cell–mediated inflammation is an essential
process for mounting a repair response after myocardial infarction (MI).
The sympathetic nervous system is known to regulate immune system
function through β-adrenergic receptors (βARs); however, their role in
regulating immune cell responses to acute cardiac injury is unknown.
Methods: Wild-type (WT) mice were irradiated followed by isoformspecific
βAR knockout (βARKO) or WT bone-marrow transplantation (BMT)
and after full reconstitution underwent MI surgery. Survival was monitored
over time, and alterations in immune cell infiltration after MI were examined
through immunohistochemistry. Alterations in splenic function were
identified through the investigation of altered adhesion receptor expression.
Results: β2ARKO BMT mice displayed 100% mortality resulting from
cardiac rupture within 12 days after MI compared with ≈20% mortality
in WT BMT mice. β2ARKO BMT mice displayed severely reduced post-
MI cardiac infiltration of leukocytes with reciprocally enhanced splenic
retention of the same immune cell populations. Splenic retention of the
leukocytes was associated with an increase in vascular cell adhesion
molecule-1 expression, which itself was regulated via β-arrestin–dependent
β2AR signaling. Furthermore, vascular cell adhesion molecule-1 expression
in both mouse and human macrophages was sensitive to β2AR activity, and
spleens from human tissue donors treated with β-blocker showed enhanced
vascular cell adhesion molecule-1 expression. The impairments in splenic
retention and cardiac infiltration of leukocytes after MI were restored to
WT levels via lentiviral-mediated re-expression of β2AR in β2ARKO bone
marrow before transplantation, which also resulted in post-MI survival rates
comparable to those in WT BMT mice.
Conclusions: Immune cell–expressed β2AR plays an essential role in
regulating the early inflammatory repair response to acute myocardial injury
by facilitating cardiac leukocyte infiltration.
MOESM4 of Targeting glycosylation of PD-1 to enhance CAR-T cell cytotoxicity
Creators: name: Shi, Xiaojuan
name: Zhang, Daiqun
name: Li, Feng
name: Zhang, Zhen
name: Wang, Shumin
name: Xuan, Yujing
name: Ping, Yu
name: Zhang, Yi
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Mathematical Sciences not elsewhere classified

description: Additional file 4:. Detailed method information and procedures of experiments.
d-wave pairing symmetry in cuprate superconductors
Creators: name: Tsuei, C. C.
name: Kirtley, J. R.
Publisher: name: arXiv
Year: 2000
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: Phase-sensitive tests of pairing symmetry have provided strong evidence for predominantly d-wave pairing symmetry in both hole- and electron-doped high-Tc cuprate superconductors. Temperature dependent measurements in YBCO indicate that the d-wave pairing dominates, with little if any imaginary component, at all temperatures from 0.5K through Tc. In this article we review some of this evidence and discuss the implications of the universal d-wave pairing symmetry in the cuprates.
description: 4 pages, M2S 2000 conference proceedings
Continuum models of the electrochemical diffuse layer in electronic-structure calculations
Creators: name: Nattino, Francesco
name: Truscott, Matthew
name: Marzari, Nicola
name: Andreussi, Oliviero
Publisher: name: arXiv
Year: 2018
Subjects: subject: Computational Physics (physics.comp-ph)
subject: Materials Science (cond-mat.mtrl-sci)
subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: Continuum electrolyte models represent a practical tool to account for the presence of the diffuse layer at electrochemical interfaces. However, despite the increasing popularity of these in the field of materials science it remains unclear which features are necessary in order to accurately describe interface-related observables such as the differential capacitance (DC) of metal electrode surfaces. We present here a critical comparison of continuum diffuse-layer models that can be coupled to an atomistic first-principles description of the charged metal surface in order to account for the electrolyte screening at electrified interfaces. By comparing computed DC values for the prototypical Ag(100) surface in an aqueous solution to experimental data we validate the accuracy of the models considered. Results suggest that a size-modified Poisson-Boltzmann description of the electrolyte solution is sufficient to qualitatively reproduce the main experimental trends. Our findings also highlight the large effect that the dielectric cavity parameterization has on the computed DC values.
Inga filipes Vent.
Creators: name: Callmander, Martin W.
name: Durbin, Olivier D.
name: Lack, Hans-Walter
name: Bungener, Patrick
name: Martin, Pascal
name: Gautier, Laurent
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Fabales
Fabaceae
Inga
Inga filipes

description: 31. Inga filipes Vent. in Mém. Cl. Sci. Math. Inst. Natl. France 8: 6. 1807 [also in Choix. Pl.: tab. 38. 1807].
 Ξ Cojoba filipes (Vent.) Barneby & J.W. Grimes
 Lectotypus (designated here): D OMINICAN REPUBLIC / HAITI: “ St. Domingo ”, Poiteau s.n. (G [G00341450]!; isolecto-: G [G00341677]!, G-DC [G00652190]!).
 Notes. – Two specimens of a single gathering have been located: one in Ventenat’s herbarium at G and a fragment in G-DC with the mention “M. B. Delessert 1816”. The later was therefore part of Ventenat’s herbarium before Delessert gave this fragment to Candolle (see introduction). The collection in Ventenat’s herbarium is designated here as the lectotype. A Poiteau duplicate is also present in G [G00341677].
description: Published as part of Callmander, Martin W., Durbin, Olivier D., Lack, Hans-Walter, Bungener, Patrick, Martin, Pascal & Gautier, Laurent, 2017, Etienne-Pierre Ventenat (1757 - 1808) and the gardens of Cels and Empress Joséphine, pp. 87-132 in Candollea 72 (1) on page 105, DOI: 10.15553/c2017v721a8, http://zenodo.org/record/5721919
Thermal transitions of the modulated superfluid for spin-orbit coupled correlated bosons in an optical lattice
Creators: name: Dutta, Arijit
name: Joshi, Abhishek
name: Sengupta, K.
name: Majumdar, Pinaki
Publisher: name: arXiv
Year: 2019
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We investigate the thermal physics of a Bose-Hubbard model with Rashba spin-orbit coupling starting from a strong coupling mean-field ground state. The essential role of the spin-orbit coupling $\left(γ\right)$ is to promote condensation of the bosons at a finite wavevector ${k}_{0}$. We find that the bosons display either homogeneous or phase-twisted or orbital ordered superfluid phases, depending on $γ$ and the inter-species interaction strength $λ$. We show that an increase of $γ$ leads to suppression of the critical interaction $U_c$ for the superfluid to Mott insulator transition in the ground state, and a reduction of the $T_c$ for superfluid to Bose-liquid transition at a fixed interaction. We capture the thermal broadening in the momentum distribution function, and the real space profiles of the thermally disordered magnetic textures, including their homogenization for $T \gtrsim T_{c}$. We provide a Landau theory based description of the ground state phase boundaries and thermal transition scales, and discuss experiments which can test our theory.
description: 11 pages, 12 figures
Magnetic Force Exerted by the Aharonov-Bohm Line (II)
Creators: name: Shelankov, A. L.
Publisher: name: arXiv
Year: 1998
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: The controversial question of the transverse force exerted by the Aharonov-Bohm (AB) magnetic flux line is reconsidered with the help of a new paraxial solution to the AB-scattering problem. It is shown that despite the left-right symmetry in the AB scattering cross-section, a beam of a finite width is deflected by the AB-line as if by the ``Lorentz'' force. The asymmetry and the magnetic force originate from the quantum interference in the forward direction within the angular size of the incident wave. In the context of the superfluid He-4 theory, the paper confirmes the Iordanskii force acting on the vortex line.
description: Apart from small modifications in layout, this is the published version of cond-mat/9802158. Major changes in presentation. The theory of the Aharonov-Bohm random array discussed in cond-mat/9802158 is omitted to fit the EPL-format. RevTeX, 5 pages
Mass and Transverse Mass Effects on the Hadron Emitter Size
Creators: name: Alexander, Gideon
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We investigate the dependence of the longitudinal emitter dimension of identical bosons, produced in the hadronic Z$^0$ decays, on their transverse mass obtained from 2-dimensional Bose-Einstein correlations (BEC) analyses. We show that this dependence is well described by the expression $r_{||}=c\sqrt{\hbarΔt}/\sqrt{m_T}$, deduced from the uncertainty relations, setting $Δt$ to be a constant of the order of $10^{-24}$ sec. This equation is essentially identical to the one previously applied to the 1-dimensional BEC results for the emitter radius dependence on the boson mass itself. It is further shown that a very similar behaviour exists also for the dependence of the interatomic separation in Bose condensates on their atomic masses when they are at the same very low temperature.
description: 10 pges, 2 figures
Sulfur and REE zoning in apatite: The example of the Colli Albani magmatic system
Creators: name: Fabbrizio, Alessandro
name: Gaeta, Mario
name: Carroll, Michael R.
name: Petrelli, Maurizio
Publisher: name: arXiv
Year: 2018
Subjects: subject: Geophysics (physics.geo-ph)
subject: FOS: Physical sciences

description: We investigate the distribution of major and trace elements in apatite crystals hosted in granular alkaline rocks composed mainly of leucite and clinopyroxene, representative of the hypabyssal crystallization of a magma body in the Quaternary ultra-potassic Colli Albani Volcanic District (CAVD), which was emplaced into thick limestone units along the Tyrrhenian margin of Italy. Results show that the analyzed crystals are the SrO-richest (up to 4.6 wt%) fluorapatite (F =2.6-3.7 wt%) of the Italian alkaline rocks. The strontium enrichment is caused by the lack of other Sr-compatible mineral phases, such as plagioclase, alkali feldspar and melilite, in these leucite- and clinopyroxene-bearing rocks. The studied samples show core-rim zoning with rims enriched in Si, S, and REE whereas the cores are enriched in Ca and P. The LREE-oxides contents of apatite, reaching 4.2 wt%, represent more than 95% of the total REE budget; SiO2 contents range from 1.3 to 3.6 wt%, and SO3 concentrations between 0.6 and 1.4 wt%.
Inula gnaphalodes Vent., Descr. Pl. Nouv.
Creators: name: Callmander, Martin W.
name: Durbin, Olivier D.
name: Lack, Hans-Walter
name: Bungener, Patrick
name: Martin, Pascal
name: Gautier, Laurent
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Asterales
Asteraceae
Inula
Inula gnaphalodes

description: 32. Inula gnaphalodes Vent., Descr. Pl. Nouv.: tab. 75. 1802.
 Ξ Pulicaria gnaphalodes (Vent.) Boiss.
 Lectotypus (designated here): [IRAN]: Anon. s.n. (G [G00341476 right-hand specimen]!).
 Notes. – This species was described on the basis of material brought back by Bruguière and Olivier from Iran. Several collections have been located of this material at G-DC and P. A single collection exists in Ventenat’s herbarium but with two gatherings. The left part represents the cultivated collection from Cels’s garden and the right part a collection with, possibly, Desfointaines’s handwriting. We have not been able to trace this collection in the historical nor general collections at P. Lack (1980: 116) designated tab. 75 in Descriptions as the lectotype. The finding of original material supersedes this explicit lectotypification. We prefer to designate here the collection Anon. s.n. as the lectotype despite the fact that we neither know the collector nor the origin. This collection is a flowering specimen and possibly used for the preparation of the drawing. The cultivated collection from Cels’s garden is sterile and is here considered as original material G [G00341476 left-hand specimen]. Other original material collected by Bruguière and Olivier documents the morphology of this plant in the wild (G-DC [G00468136], P [P02812002, P02812003, P02812004, P03295331]).
description: Published as part of Callmander, Martin W., Durbin, Olivier D., Lack, Hans-Walter, Bungener, Patrick, Martin, Pascal & Gautier, Laurent, 2017, Etienne-Pierre Ventenat (1757 - 1808) and the gardens of Cels and Empress Joséphine, pp. 87-132 in Candollea 72 (1) on page 106, DOI: 10.15553/c2017v721a8, http://zenodo.org/record/5721919
MOESM1 of Excessive intravenous crystalloid infusion after video-assisted thoracoscopic surgery lobectomy is associated with postoperative pneumonia
Creators: name: Yang, Rong
name: Du, Chengli
name: Xu, Jinming
name: Yao, Linpeng
name: Zhang, Siying
name: Wu, Yihe
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Pharmacology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Marine Biology
subject: Cancer

description: Additional file 1: Table S1. Assignment of variables in multivariate analysis.
Ionidium buxifolium Vent., Jard. Malmaison
Creators: name: Callmander, Martin W.
name: Durbin, Olivier D.
name: Lack, Hans-Walter
name: Bungener, Patrick
name: Martin, Pascal
name: Gautier, Laurent
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Malpighiales
Violaceae
Ionidium
Ionidium buxifolium

description: 33. Ionidium buxifolium Vent., Jard. Malmaison 1: sub tab. 27. 1803.
 Ξ Afrohybanthus buxifolius (Vent.) Flicker
 Lectotypus (designated here): M ADAGASCAR: sine loc., Commerson s.n. (P-JU n° 12784 [P00667193]!; isolecto-: G [G00341436]!).
 Notes. – Flicker & Ballard (2015: 44) transferred Ionidium buxifolium to their new genus Afrohybanthus Flicker (Violaceae) . The authors cited the collection at P-JU as the holotype. Ventenat in Jardin de Malmaison (1803: sub tab. 27) explicitly mentioned “ex Herb Juss”. However, at G a very fragmented clastotype exists. We therefore considered that the collection in P-JU should be designated as the lectotype since it is a much better preserved collection and the specimen was used by Ventenat for the validation of the name Ionidium buxifolium.
description: Published as part of Callmander, Martin W., Durbin, Olivier D., Lack, Hans-Walter, Bungener, Patrick, Martin, Pascal & Gautier, Laurent, 2017, Etienne-Pierre Ventenat (1757 - 1808) and the gardens of Cels and Empress Joséphine, pp. 87-132 in Candollea 72 (1) on page 106, DOI: 10.15553/c2017v721a8, http://zenodo.org/record/5721919
Expression Recognition Using the Periocular Region: A Feasibility Study
Creators: name: Alonso-Fernandez, Fernando
name: Bigun, Josef
name: Englund, Cristofer
Publisher: name: arXiv
Year: 2018
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: This paper investigates the feasibility of using the periocular region for expression recognition. Most works have tried to solve this by analyzing the whole face. Periocular is the facial region in the immediate vicinity of the eye. It has the advantage of being available over a wide range of distances and under partial face occlusion, thus making it suitable for unconstrained or uncooperative scenarios. We evaluate five different image descriptors on a dataset of 1,574 images from 118 subjects. The experimental results show an average/overall accuracy of 67.0%/78.0% by fusion of several descriptors. While this accuracy is still behind that attained with full-face methods, it is noteworthy to mention that our initial approach employs only one frame to predict the expression, in contraposition to state of the art, exploiting several order more data comprising spatial-temporal data which is often not available.
description: Accepted for publication at Intl Conf on Signal Image Technology & Internet Based Systems, SITIS 2018
Effect of Non-Magnetic Impurities (Zn,Li) in a Hole Doped Spin-Fermion Model for Cuprates
Creators: name: Buhler, Charles
name: Yunoki, Seiji
name: Moreo, Adriana
Publisher: name: arXiv
Year: 2000
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: The effect of adding non-magnetic impurities (NMI), such as Zn or Li, to high-Tc cuprates is studied applying Monte Carlo techniques to a spin-fermion model. It is observed that adding Li is qualitatively similar to doping with equal percentages of Sr and Zn. The mobile holes (MH) are trapped by the NMI and the system remains insulating and commensurate with antiferromagnetic (AF) correlations. This behavior persists in the region %NMI > %MH. On the other hand, when %NMI < %MH magnetic and charge incommensurabilities are observed. The vertical or horizontal hole-rich stripes, present when % NMI=0 upon hole doping, are pinned by the NMI and tend to become diagonal, surrounding finite AF domains. The %MH-%NMI plane is investigated. Good agreement with experimental results is found in the small portion of this diagram where experimental data are available. Predictions about the expected behavior in the remaining regions are made.
description: Four pages with four figures embedded in text
Deformed Fermi Surface Theory of Magneto-Acoustic Anomaly in Modulated Quantum Hall Systems Near $/nu=1/2$
Creators: name: Zimbovskaya, Nataliya A.
name: Birman, Joseph L.
Publisher: name: arXiv
Year: 1998
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We introduce a new generic model of a deformed Composite Fermion-Fermi Surface (CF-FS) for the Fractional Quantum Hall Effect near $/nu=1/2$ in the presence of a periodic density modulation. Our model permits us to explain recent Surface Acoustic Wave observations of anisotropic anomalies [1,2] in sound velocity and attenuation- appearance of peaks and anisotropy - which originate from contributions to the conductivity tensor due to regions of the CF-FS which are flattened by the applied modulation. The calculated magnetic field and wave vector dependence of the CF conductivity,velocity shift and attenuation agree with experiments.
description: Revised manuscript (cond-mat/9807044) 23 September 1998; 10 pages
On the relationship between Weyl functions of Jacobi matrices and response vectors for special dynamical systems with discrete time
Creators: name: Mikhaylov, A. S.
name: Mikhaylov, V. S.
name: Simonov, S. A.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: We derive special representation for Weyl functions for finite and semi-infinite Jacobi matrices with bounded entries based on a relationship between spectral problem for Jacobi matrices and initial-boundary value problem for auxiliary dynamical systems with the discrete time for Jacobi matrices.
Ionidium heterophyllum Vent., Jard. Malmaison
Creators: name: Callmander, Martin W.
name: Durbin, Olivier D.
name: Lack, Hans-Walter
name: Bungener, Patrick
name: Martin, Pascal
name: Gautier, Laurent
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Malpighiales
Violaceae
Ionidium
Ionidium heterophyllum

description: 34. Ionidium heterophyllum Vent., Jard. Malmaison 1: sub tab. 27. 1803.
 Lectotypus (designated here): C HINA: sine loc., d’Incarville 109 (P-JU n° 12788 [P00667186]!; isolecto-: G [G00341597]!).
 = Afrohybanthus enneaspermus (L.) Flicker
 Notes. – Flicker & Ballard (2015: 48) cited the collection at P-JU as the holotype. Ventenat in Jardin de Malmaison (1803: sub tab. 27) clearly mentioned “ex Herb Juss” and the collection deposited in his herbarium at P-JU should be considered as the holotype. Nevertheless, as above under Ionidium buxifolium, the G collection is a very fragmented clastotype and the collection deposited at P-JU is a much better preserved collection and was used by Ventenat for the description of Ionidium heterophyllum. The P-JU collection is therefore designated as the lectotype but cannot be considered as the holotype as given by Flicker & Ballard (2015).
description: Published as part of Callmander, Martin W., Durbin, Olivier D., Lack, Hans-Walter, Bungener, Patrick, Martin, Pascal & Gautier, Laurent, 2017, Etienne-Pierre Ventenat (1757 - 1808) and the gardens of Cels and Empress Joséphine, pp. 87-132 in Candollea 72 (1) on page 106, DOI: 10.15553/c2017v721a8, http://zenodo.org/record/5721919
Designer Approaches for GPCR Modulation for Cardiovascular Disease.pdf
Creators: name: Grisanti, Laurel A.
name: Schumacher, Sarah M.
name: Tilley, Douglas G.
name: Koch, Walter J.
Publisher: name: Health Research Alliance
Year: 2019
Subjects: subject: 110201 Cardiology (incl. Cardiovascular Diseases)
subject: FOS: Clinical medicine

description: The new horizon for cardiac therapy may lie beneath the surface, with the downstream mediators of G protein–
coupled receptor (GPCR) activity. Targeted approaches have shown that receptor activation may be biased toward
signaling through G proteins or through GPCR kinases (GRKs) and b-arrestins, with divergent functional outcomes. In
addition to these canonical roles, numerous noncanonical activities of GRKs and b-arrestins have been demonstrated
to modulate GPCR signaling at all levels of receptor activation and regulation. Further, research continues to identify
novel GRK/effector and b-arrestin/effector complexes with distinct impacts on cardiac function in the normal heart
and the diseased heart. Coupled with the identification of once orphan receptors and endogenous ligands with
beneficial cardiovascular effects, this expands the repertoire of GPCR targets. Together, this research highlights the
potential for focused therapeutic activation of beneficial pathways, with simultaneous exclusion or inhibition of
detrimental signaling, and represents a new wave of therapeutic development.
MOESM11 of PD1Hi CD8+ T cells correlate with exhausted signature and poor clinical outcome in hepatocellular carcinoma
Creators: name: Ma, Jiaqiang
name: Zheng, Bohao
name: Goswami, Shyamal
name: Meng, Lu
name: Zhang, Dandan
name: Cao, Chunmei
name: Li, Teng
name: Zhu, Fangming
name: Ma, Lijie
name: Zhang, Zhao
name: Zhang, Shuhao
name: Duan, Meng
name: Chen, Qin
name: Gao, Qiang
name: Zhang, Xiaoming
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Additional file 11. Table S3. Univariate and multivariate analysis in the validation cohort (n=254).
Free space laser telecommunication through fog
Creators: name: Schimmel, Guillaume
name: Produit, Thomas
name: Mongin, Denis
name: Kasparian, Jérôme
name: Wolf, Jean-Pierre
Publisher: name: arXiv
Year: 2018
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Atmospheric clearness is a key issue for free space optical communications (FSO). We present the first active method to achieve FSO through clouds and fog, using ultrashort high intensity laser filaments. The laser filaments opto-mechanically expel the droplets out of the beam and create a cleared channel for transmitting high bit rate telecom data at 1.55 microns. The low energy required for the process allows considering applications to Earth-satellite FSO and secure ground based optical communication, with classical or quantum protocols.
description: 4 pages + 2 pages supplementary text and movies
QCD Corrections and the Leptoquark Interpretation of the HERA High Q^2 Events
Creators: name: Kunszt, Z.
name: Stirling, W. J.
Publisher: name: arXiv
Year: 1997
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The excess of high-$Q^2$ events found by H1 and ZEUS at HERA in $e^+p$ deep-inelastic scattering above the Standard Model prediction motivates us to calculate the NLO QCD corrections to the HERA scalar leptoquark (or squark) production cross sections. We find that the corrections are significant, of order 50% in the mass range of interest. We also calculate the leptoquark average transverse momentum squared and find it to be rather small. Various leptoquark production cross sections at the Tevatron $p \bar p$ collider are also considered. We investigate in detail the leptoquark interpretation of the HERA data. First we assume a minimal leptoquark model with a single diagonal Yukawa coupling to first family lepton and quark mass eigenstates only. In this case constraints from atomic parity violating experiments allow only isodoublet scalar leptoquark production at HERA. This interpretation can be confirmed or ruled out in the near future by high luminosity data at the Tevatron. The Tevatron data already appear to rule out the vector leptoquark interpretation of the HERA data. We also consider a more general model which allows for all possible left-handed, right-handed, flavour and lepton number changing couplings. The allowed values of the Yukawa couplings of this general model offer several different interpretations of the data which are radically different from the minimal model solutions. However these somewhat ad hoc tuned solutions can easily be tested by future HERA experiments.
description: 25 pages, LaTeX, incl. 3 postscript figures, uses epsf.sty
MOESM12 of PD1Hi CD8+ T cells correlate with exhausted signature and poor clinical outcome in hepatocellular carcinoma
Creators: name: Ma, Jiaqiang
name: Zheng, Bohao
name: Goswami, Shyamal
name: Meng, Lu
name: Zhang, Dandan
name: Cao, Chunmei
name: Li, Teng
name: Zhu, Fangming
name: Ma, Lijie
name: Zhang, Zhao
name: Zhang, Shuhao
name: Duan, Meng
name: Chen, Qin
name: Gao, Qiang
name: Zhang, Xiaoming
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Additional file 12. Table S4. qRT-PCR primer sequences.
On the criterion for Bose-Einstein condensation for particles in traps
Creators: name: Pethick, C. J.
name: Pitaevskii, L. P.
Publisher: name: arXiv
Year: 2000
Subjects: subject: Condensed Matter (cond-mat)
subject: FOS: Physical sciences

description: We consider the criterion for Bose condensation for particles in a harmonic trap. For a fixed angular momentum, the lowest energy state for a cloud of bosons with attractive interactions is the ground state of the cloud with all the angular momentum in the center-of-mass motion, and the one-particle reduced density matrix generally does not have a single large eigenvalue, but a number of them, suggesting that the state is an example of a fragmented condensate (Wilkin, Gunn, and Smith, Phys. Rev. Lett. 80, 2265 (1998)). We show that a convenient way to describe correlations in the system is by defining an internal one-particle reduced density matrix, in which the center-of-mass motion is eliminated, and that this has a single eigenvalue equal to the number of particles for the problem considered here. Our considerations indicate that care is necessary in formulating a criterion for Bose-Einstein condensation.
description: 2 pages, RevTex, Submitted to Phys. Rev. A
Ionidium strictum Vent., Jard. Malmaison
Creators: name: Callmander, Martin W.
name: Durbin, Olivier D.
name: Lack, Hans-Walter
name: Bungener, Patrick
name: Martin, Pascal
name: Gautier, Laurent
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Malpighiales
Violaceae
Ionidium
Ionidium strictum

description: 35. Ionidium strictum Vent., Jard. Malmaison 1: sub tab. 27. 1803.
 Ξ Viola stricta (Vent.) Poir.
 Lectotypus (designated here): D OMINICAN REPUBLIC / HAITI: “ St. Domingo ”, Poiteau s.n. (P-JU n° 12799 [P00672092]!; isolecto-: G-DC [G00209948]!, P-JU n° 12799 [P00672093]!).
 Notes. – No collection has been located at G. Two collections have been located at P-JU and one at G-DC. The more complete collection at P-JU is designated here as the lectotype and the remaining collections are considered as isolectotypes.
description: Published as part of Callmander, Martin W., Durbin, Olivier D., Lack, Hans-Walter, Bungener, Patrick, Martin, Pascal & Gautier, Laurent, 2017, Etienne-Pierre Ventenat (1757 - 1808) and the gardens of Cels and Empress Joséphine, pp. 87-132 in Candollea 72 (1) on page 106, DOI: 10.15553/c2017v721a8, http://zenodo.org/record/5721919
$γγ$ cross-sections and $γγ$ colliders
Creators: name: Godbole, Rohini M.
name: Pancheri, G.
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We summarize the predictions of different models for total $γγ$ cross-sections. The experimentaly observed rise of $σ_{γγ}$ with $\sqrt{s_{γγ}}$, faster than that for $σ_{\bar p p}$, $σ_{γp}$ is in agreement with the predictions of the Eikonalized Minijet Models as opposed to those of the Regge-Pomeron models. We then show that a measurement of $σ_{γγ}$ with an accuracy of $\lessapprox 8-9% (6-7%)$ is necessary to distinguish among different Regge-Pomeron type models (among the different parametrisations of the EMM models) and a precision of $\lessapprox$ 20% is required to distinguish among the predictions of the EMMs and of those models which treat like 'photon like a proton', for the energy range $300 < \sqrt{s_{γγ}} < 500$ GeV. We further show that the difference in model predictions for $σ_{γγ}$ of about a factor 2 at $\sqrt{s_{γγ}} = 700 $ GeV reduces to $\sim$ 30% when folded with bremsstrahlung $γ$ spectra to calculate $σ({e^+e^- \to e^+e^-γγ\to e^+e^-X})$. We point out then the special role that $γγ$ colliders can play in shedding light on this
description: 11 pages, 8 figures, LaTeX, uses elsart.cls. Talk to appear in the proceedings of the the International Workshop on High Energy Photon Colliders, DESY, Hamburg, June 2000
Improving Automated Latent Fingerprint Identification using Extended Minutia Types
Creators: name: Krish, Ram P.
name: Fierrez, Julian
name: Ramos, Daniel
name: Alonso-Fernandez, Fernando
name: Bigun, Josef
Publisher: name: arXiv
Year: 2018
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: Latent fingerprints are usually processed with Automated Fingerprint Identification Systems (AFIS) by law enforcement agencies to narrow down possible suspects from a criminal database. AFIS do not commonly use all discriminatory features available in fingerprints but typically use only some types of features automatically extracted by a feature extraction algorithm. In this work, we explore ways to improve rank identification accuracies of AFIS when only a partial latent fingerprint is available. Towards solving this challenge, we propose a method that exploits extended fingerprint features (unusual/rare minutiae) not commonly considered in AFIS. This new method can be combined with any existing minutiae-based matcher. We first compute a similarity score based on least squares between latent and tenprint minutiae points, with rare minutiae features as reference points. Then the similarity score of the reference minutiae-based matcher at hand is modified based on a fitting error from the least square similarity stage. We use a realistic forensic fingerprint casework database in our experiments which contains rare minutiae features obtained from Guardia Civil, the Spanish law enforcement agency. Experiments are conducted using three minutiae-based matchers as a reference, namely: NIST-Bozorth3, VeriFinger-SDK and MCC-SDK. We report significant improvements in the rank identification accuracies when these minutiae matchers are augmented with our proposed algorithm based on rare minutiae features.
description: To appear in Information Fusion journal (Elsevier)
Quantifying High-order Interdependencies via Multivariate Extensions of the Mutual Information
Creators: name: Rosas, Fernando
name: Mediano, Pedro A. M.
name: Gastpar, Michael
name: Jensen, Henrik J.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Information Theory (cs.IT)
subject: Neurons and Cognition (q-bio.NC)
subject: FOS: Computer and information sciences
subject: FOS: Biological sciences

description: This article introduces a model-agnostic approach to study statistical synergy, a form of emergence in which patterns at large scales are not traceable from lower scales. Our framework leverages various multivariate extensions of Shannon's mutual information, and introduces the O-information as a metric capable of characterising synergy- and redundancy-dominated systems. We develop key analytical properties of the O-information, and study how it relates to other metrics of high-order interactions from the statistical mechanics and neuroscience literature. Finally, as a proof of concept, we use the proposed framework to explore the relevance of statistical synergy in Baroque music scores.
GHRS Observations of Cool, Low-Gravity Stars. VI Mass-Loss Rates and Wind Parameters for M Giants
Creators: name: Rau, Gioia
name: Nielsen, Krister E.
name: Carpenter, Kenneth G.
name: Airapetian, Vladimir
Publisher: name: arXiv
Year: 2018
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: The photon-scattering winds of M-giants absorb parts of the chromospheric emission lines and produce self-reversed spectral features in high resolution {\it HST}/GHRS spectra. These spectra provide an opportunity to assess fundamental parameters of the wind, including flow and turbulent velocities, the optical depth of the wind above the region of photon creation, and the star's mass-loss rate. This paper is the last paper in the series `GHRS Observations of Cool, Low-Gravity Stars'; the last several have compared empirical measurements of spectral emission lines with models of the winds and mass-loss of K-giant and supergiants. We have used the Sobolev with Exact Integration (SEI) radiative transfer code, along with simple models of the outer atmosphere and wind, to determine and compare the wind characteristics of the two M-giant stars, $γ$~Cru (M3.5III) and $μ$~Gem (M3IIIab), with previously derived values for low-gravity K-stars. The analysis specifies the wind parameters and calculates line profiles for the \ion{Mg}{2} resonance lines, in addition to a range of unblended \ion{Fe}{2} lines. Our line sample covers a large range of wind opacities and, therefore, probes a range of heights in the atmosphere. Our results show that $μ$~Gem has a slower and more turbulent wind then $γ$~Cru. Also, $μ$~Gem has weaker chromosphere, in terms of surface flux, with respect to $γ$~Cru. This suggests that $μ$~Gem is more evolved than $γ$~Cru. Comparing the two M-giants in this work with previously studied K-giant and supergiant stars ($α$~Tau, $γ$~Dra, $λ$~Vel) reveals that the M-giants have slower winds than the earlier giants, but exhibit higher mass-loss rates. Our results are interpreted in the context of the winds being driven by Alfvén waves.
description: Accepted for publications on ApJ, 17 pages, 7 figures
Numerical renormalization group approach to fluctuation exchange in the presence of electron-phonon coupling: Pairing in the Holstein-Hubbard model
Creators: name: Pao, C. -H.
name: Schuttler, H. -B.
Publisher: name: arXiv
Year: 1998
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: The fluctuation exchange (FLEX) approximation is applied to study the Holstein-Hubbard model. Due to the retarded nature of the phonon-mediated electron-electron interaction, neither fast Fourier transform (FFT) nor previously developed NRG methods for Hubbard-type purely electronic models are applicable, while brute force solutions are limited by the demands on computational time and storage which increase rapidly at low temperature $T$. Here,we describe a new numerical renormalization group (NRG) technique to solve the FLEX equations efficiently. Several orders of magnitude of CPU time and storage can be saved at low $T$ ($\sim 80K$). To test our approach, we compare our NRG results to brute force calculations on small lattices at elevated temperatures. Both s-wave and d-wave superconducting phase diagrams are then obtained by applying the NRG approach at low $T$. The isotope effect for s-wave pairing is BCS-like in a realistic phonon frequency range, but vanishes at unphysically large phonon frequency ($\sim $ band width). For d-wave pairing, the isotope exponent is negative and small compared to the typical observed values in non-optimally doped cuprates.
description: 29 pages, 12 figures
title: An investigation of the contribution of axial rigidity to turning deficits in individuals with Parkinson’s disease
Creators: name: Khobkhun, F
Publisher: name: Liverpool John Moores University
Year: 2019

description: Difficulty in turning is prominent in individuals with Parkinson’s disease (PD) and the resulting postural instability increases their risk of falling. Therefore, understanding the mechanisms underpinning turning deficits in PD is highly important for rehabilitation and fall prevention. The first aim of this thesis was to clarify the mechanisms of increased fall risk during turning in PD by emulating: head and neck rigidity in healthy adults, and then observing the effects on eye movements and whole-body coordination while turning on the spot. The results revealed that experimentally inducing head and neck rigidity had multiple effects on eye movement characteristics, step amplitude, and total steps taken to complete the turn. The resultant behaviour was similar to that previously observed in individuals with PD. The second aim of this thesis was to validate the use of Inertial Measurement Units (IMUs) in combination with mobile electrooculography (EOG) for measuring eye, head and whole body coordination during turning with a view to developing a methodology that could be used to assess the effects of exercise intervention on turning characteristics of PD patients in a clinical setting. The results showed excellent reliability when compared with measures obtained using a Vicon motion analysis system suggesting that IMUs provide a viable alternative to camera-based motion capture for accurately measuring turning behaviour. The third aim of the study was to conduct a scoping review to determine whether exercise-based rehabilitation is effective in reducing axial rigidity in individuals with PD. Four out of eleven studies eligible for inclusion focused explicitly on exercise-based treatment for axial rigidity in individuals with PD. The results of the scoping review were used to design a modified exercise programme aimed at improving axial rigidity and turning dysfunction in individuals with PD. The final aim was to carry out a pilot Randomized Control Trial to study the effects of a modified exercise programme on various markers of functional mobility and turning performance in PD patients; e.g., Unified Parkinson’s Disease Rating Scale (UPDRS) functional reach test, step size, total steps and improvement in fall efficacy scale in individuals with PD. These preliminary results support the notion that targeting axial deficits may be an effective rehabilitation approach for improving mobility and reducing falls in PD.
Jatropha hernandiifolia Vent., Jard. Malmaison
Creators: name: Callmander, Martin W.
name: Durbin, Olivier D.
name: Lack, Hans-Walter
name: Bungener, Patrick
name: Martin, Pascal
name: Gautier, Laurent
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Malpighiales
Euphorbiaceae
Jatropha
Jatropha hernandiifolia

description: 36. Jatropha hernandiifolia Vent., Jard. Malmaison 1: sub tab. 52. 1804.
 Lectotypus (designated here): U NITED STATES . Puerto Rico: sine loc., Riedlé s.n. (P [P04829499]!; isolecto-: P-JU n° 16506 [P00678913]!).
 Notes. – Dehgan (2012: 145) cited a Poiteau s.n. collection as type collected in Santo Domingo [P04829428]. Ventenat in Jardin de Malmaison (1804: sub tab. 52) clearly stated that he has obtained this taxon from Riedlé in Puerto Rico while travelling on the Belle-Angélique to the West Indies and Porto Rico with his friend Baudin (see introduction).
 No collection of Jatropha hernandiifolia exists at G but two collections have been found in P. On the collection Riedlé s.n. [P04829499] “graines n° 131” has been written and this collection does represent the collection form which Ventenat obtained seeds. It is here designated as the lectotype. A Herb. Baudin collection in P-JU is considered as isolectotype because it also represents material gathered by Riedlé (see above).
description: Published as part of Callmander, Martin W., Durbin, Olivier D., Lack, Hans-Walter, Bungener, Patrick, Martin, Pascal & Gautier, Laurent, 2017, Etienne-Pierre Ventenat (1757 - 1808) and the gardens of Cels and Empress Joséphine, pp. 87-132 in Candollea 72 (1) on page 106, DOI: 10.15553/c2017v721a8, http://zenodo.org/record/5721919
MOESM13 of PD1Hi CD8+ T cells correlate with exhausted signature and poor clinical outcome in hepatocellular carcinoma
Creators: name: Ma, Jiaqiang
name: Zheng, Bohao
name: Goswami, Shyamal
name: Meng, Lu
name: Zhang, Dandan
name: Cao, Chunmei
name: Li, Teng
name: Zhu, Fangming
name: Ma, Lijie
name: Zhang, Zhao
name: Zhang, Shuhao
name: Duan, Meng
name: Chen, Qin
name: Gao, Qiang
name: Zhang, Xiaoming
Publisher: name: figshare
Year: 2019
Subjects: Space Science
Medicine
Cell Biology
Molecular Biology
Biological Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified
Developmental Biology
Cancer

description: Additional file 13. Supplementary figure legends.
Total Photonic and Hadronic Cross-sections
Creators: name: Godbole, Rohini M.
name: Grau, A.
name: Pancheri, G.
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We discuss total cross-sections within the context of the QCD calculable mini-jet model, highlighting its successes and failures. In particular we show its description of $γγ\to hadrons$ and compare it with OPAL and L3 data. We extrapolate this result to $γp$ total cross-sections and propose a phenomenological ansätz for virtual photon cross-sections. We point out that the good agreement with data obtained with the Eikonal Minijet Model should not hide the many uncertainties buried in the impact parameter distribution. A model obtained from Soft Gluon Summation is briefly discussed and its application to hadronic cross-sections is shown.
description: 10 pages, 5 figures, LaTeX, uses aipproc.sty. To appear in the proceedings of Photon 2000, Ambelside, U.K., Aug 2000. The title, the number of pages and the number of figures in the announcement were corrected to correspond to the submitted paper
Action and intention recognition of pedestrians in urban traffic
Creators: name: Varytimidis, Dimitrios
name: Alonso-Fernandez, Fernando
name: Duran, Boris
name: Englund, Cristofer
Publisher: name: arXiv
Year: 2018
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: Action and intention recognition of pedestrians in urban settings are challenging problems for Advanced Driver Assistance Systems as well as future autonomous vehicles to maintain smooth and safe traffic. This work investigates a number of feature extraction methods in combination with several machine learning algorithms to build knowledge on how to automatically detect the action and intention of pedestrians in urban traffic. We focus on the motion and head orientation to predict whether the pedestrian is about to cross the street or not. The work is based on the Joint Attention for Autonomous Driving (JAAD) dataset, which contains 346 videoclips of various traffic scenarios captured with cameras mounted in the windshield of a car. An accuracy of 72% for head orientation estimation and 85% for motion detection is obtained in our experiments.
description: Accepted for publication at Intl Conf on Signal Image Technology & Internet Based Systems, SITIS 2018