cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Hoplojassini
Creators: name: Gonçalves, Clayton Corrêa
name: Dietrich, Christopher H.
name: Takiya, Daniela Maeda
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy

description: Key to species of Hoplojassini
1. Scutellum flattened, without keel (Krishnankutty & Dietrich, 2012: Figs 2, 7); forewing without closed anteapical cells, setae scattered on anterior half of membrane (Krishnankutty & Dietrich, 2012: Figs 1, 7); male pygofer with processes (Krishnankutty & Dietrich, 2012: Figs 9, 19) (Nigrojassus)............................................................ 2
- Scutellum elevated dorsally, with prominent keel (Figs 27−32); forewing with one or more closed anteapical cells; without setae (Fig. 4); male pygofer without processes (Fig. 6)....................................................... 3
2. Male pygofer with dorsally directed long process arising near middle of posterior margin (Krishnankutty & Dietrich, 2012: Fig. 9); aedeagus without processes, with dorsal preapical angular prominence (Krishnankutty & Dietrich, 2012: Figs 17, 18)............................................................................................. N. madhurai
- Male pygofer with posteriorly directed short falcate median process (Krishnankutty & Dietrich, 2012: Fig. 19); aedeagus with pair of apical and basal processes, without preapical angular prominence (Krishnankutty & Dietrich, 2012: Figs 21, 22)............................................................................................... N. ananthi
3. Crown slightly produced anteriorly (Figs 28, 30); pronotum deeply striated transversely and strongly declivous anteriorly (Figs 27−30); scutellum not extended beyond clavus apex of forewing at rest position and with posterior half strongly elevated dor- sally (Figs 27−30); forewing with apex rounded (Figs 4, 19); aedeagus without process (Figs 11−13) (Carinojassus gen. nov.).......................................................................... Carinojassus guianensis sp. nov.
- Crown not differentiated (Fig. 32); pronotum very weakly striated transversely and moderately declivous anteriorly (Figs 31, 32); scutellum extending beyond clavus apex of forewing at rest position and inflated throughout its length (Figs 31, 32); forewing with apex truncated (Fig. 32); aedeagus with pair of lateral processes (Dietrich, 1993: Fig. 15) (Hoplojassus)........................................................................................ Hoplojassus brasiliensis
description: Published as part of Gonçalves, Clayton Corrêa, Dietrich, Christopher H. & Takiya, Daniela Maeda, 2020, A new genus of Hoplojassini from French Guiana (Hemiptera: Cicadellidae Iassinae) and identification key for species of tribe, pp. 351-358 in Zootaxa 4742 (2) on page 357, DOI: 10.11646/zootaxa.4742.2.8, http://zenodo.org/record/3754871
Fortepunctatum
Creators: name: Shavrin, Alexey V.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Staphylinidae
Fortepunctatum

description: Fortepunctatum group
Diagnosis. Body small, suboval, with very convex pronotum and elytra; apical segment of maxillary palpomeres moderately narrow, gradually narrowed from basal portion toward apex, significantly shorter than very wide preceding segment; apical portion of internal sac with moderately long thorn-shaped structures.
Species included. Anthobium flavoguttatum sp. n., A. fortepunctatum sp. n.
Remarks. The Fortepunctatum group differs from the remaining groups of the genus by the shape of small and suboval body with very convex pronotum and elytra, the significantly widened apicad preapical segment of the maxillary palpomeres, the less distinct lateral impressions of the pronotum, and the presence of elongate sclerotized structures of the apical part of the internal sac. Regarding the general shapes of the mouthparts, including the shape of the apical segment of the maxillary palpomeres, from widest basal portion gradually narrowed apicad, species of the Fortepunctatum group somewhat resemble some species of the Atrocephalum group (Shavrin 2020), from which they differs by the shorter body with larger punctation of the pronotum and the elytra, and the absence of a small deep notch between antennal insertions and apical margins of the eyes.
Key to species of the Fortepunctatum group
1 Pronotum distinctly less than twice as broad as long. Elytra more than twice as long as pronotum, with moderately large and sparse punctation. Apical portions of parameres wide (Fig. 20). Habitus as in Fig. 1. China: Gansu, Shaanxi ................................................................................................... A. fortepunctatum
- Pronotum 1.7–1.8 times as broad as long. Elytra about three times as long as pronotum, with distinctly larger, deeper and denser punctation. Apical portions of parameres moderately narrow (Fig. 22). Habitus as in Fig. 2. China: Sichuan .................................................................................................... A. flavoguttatum
description: Published as part of Shavrin, Alexey V., 2022, A revision of Eastern Palaearctic Anthobium Leach, 1819 (Coleoptera: Staphylinidae: Omaliinae: Anthophagini). VI. Fortepunctatum group, pp. 273-282 in Zootaxa 5120 (2) on page 274, DOI: 10.11646/zootaxa.5120.2.7, http://zenodo.org/record/6389339
Additional file 3: of
                     SCN8A mutations in Chinese patients with early onset epileptic encephalopathy and benign infantile seizures
Creators: name: Jiaping Wang
name: Gao, Hua
name: Xinhua Bao
name: Qingping Zhang
name: Jiarui Li
name: Liping Wei
name: Xiru Wu
name: Chen, Yan
name: Shujie Yu
Publisher: name: Figshare
Year: 2017
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology

description: 23 candidate genes identified in the Chinese family with epilepsy, by whole-exome sequencing. (DOCX 16Â kb)
Multipopulation mortality modelling and forecasting: The multivariate functional principal component with time weightings approaches
Creators: name: Lam, Ka Kin
name: Wang, Bo
Publisher: name: arXiv
Year: 2021
Subjects: subject: Methodology (stat.ME)
subject: Applications (stat.AP)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: Human mortality patterns and trajectories in closely related populations are likely linked together and share similarities. It is always desirable to model them simultaneously while taking their heterogeneity into account. This paper introduces two new models for joint mortality modelling and forecasting multiple subpopulations in adaptations of the multivariate functional principal component analysis techniques. The first model extends the independent functional data model to a multi-population modelling setting. In the second one, we propose a novel multivariate functional principal component method for coherent modelling. Its design primarily fulfils the idea that when several subpopulation groups have similar socio-economic conditions or common biological characteristics, such close connections are expected to evolve in a non-diverging fashion. We demonstrate the proposed methods by using sex-specific mortality data. Their forecast performances are further compared with several existing models, including the independent functional data model and the Product-Ratio model, through comparisons with mortality data of ten developed countries. Our experiment results show that the first proposed model maintains a comparable forecast ability with the existing methods. In contrast, the second proposed model outperforms the first model as well as the current models in terms of forecast accuracy, in addition to several desirable properties.
Robust non-parametric mortality and fertility modelling and forecasting: Gaussian process regression approaches
Creators: name: Lam, Ka Kin
name: Wang, Bo
Publisher: name: arXiv
Year: 2021
Subjects: subject: Machine Learning (stat.ML)
subject: Machine Learning (cs.LG)
subject: Applications (stat.AP)
subject: Methodology (stat.ME)
subject: FOS: Computer and information sciences

description: A rapid decline in mortality and fertility has become major issues in many developed countries over the past few decades. A precise model for forecasting demographic movements is important for decision making in social welfare policies and resource budgeting among the government and many industry sectors. This article introduces a novel non-parametric approach using Gaussian process regression with a natural cubic spline mean function and a spectral mixture covariance function for mortality and fertility modelling and forecasting. Unlike most of the existing approaches in demographic modelling literature, which rely on time parameters to decide the movements of the whole mortality or fertility curve shifting from one year to another over time, we consider the mortality and fertility curves from their components of all age-specific mortality and fertility rates and assume each of them following a Gaussian process over time to fit the whole curves in a discrete but intensive style. The proposed Gaussian process regression approach shows significant improvements in terms of preciseness and robustness compared to other mainstream demographic modelling approaches in the short-, mid- and long-term forecasting using the mortality and fertility data of several developed countries in our numerical experiments.
Additional file 1: of The acid-sensing ion channel, ASIC2, promotes invasion and metastasis of colorectal cancer under acidosis by activating the calcineurin/NFAT1 axis
Creators: name: Zhi-Hang Zhou
name: Song, Jin-Wen
name: Li, Wen
name: Liu, Xue
name: Cao, Liu
name: Wan, Lu-Ming
name: Tan, Ying-Xia
name: Ji, Shou-Ping
name: Liang, Yu-Mei
name: Gong, Feng
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Table S1. Primers used in the present study (DOCX 17 kb)
Reeb flows transverse to foliations
Creators: name: Zung, Jonathan
Publisher: name: arXiv
Year: 2021
Subjects: subject: Geometric Topology (math.GT)
subject: Symplectic Geometry (math.SG)
subject: FOS: Mathematics
subject: 57R30, 57K33

description: Let $\mathcal F$ be a co-oriented $C^2$ foliation on a closed, oriented 3-manifold. We show that $T\mathcal F$ can be perturbed to a contact structure with Reeb flow transverse to $\mathcal F$ if and only if $\mathcal F$ does not support an invariant transverse measure. The resulting Reeb flow has no contractible orbits. This answers a question of Colin and Honda. The main technical tool in our proof is leafwise Brownian motion which we use to construct good transverse measures for $\mathcal F$; this gives a new perspective on the Eliashberg--Thurston theorem.
description: 39 pages, 3 figures. v2: a more elementary proof of proposition 2, and several corrections/improvements to the exposition
Additional file 2: of
                     SCN8A mutations in Chinese patients with early onset epileptic encephalopathy and benign infantile seizures
Creators: name: Jiaping Wang
name: Gao, Hua
name: Xinhua Bao
name: Qingping Zhang
name: Jiarui Li
name: Liping Wei
name: Xiru Wu
name: Chen, Yan
name: Shujie Yu
Publisher: name: Figshare
Year: 2017
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: 485 genes in the targeted-next generation sequencing panel. (PDF 45Â kb)
Additional file 1: of
                     SCN8A mutations in Chinese patients with early onset epileptic encephalopathy and benign infantile seizures
Creators: name: Jiaping Wang
name: Gao, Hua
name: Xinhua Bao
name: Qingping Zhang
name: Jiarui Li
name: Liping Wei
name: Xiru Wu
name: Chen, Yan
name: Shujie Yu
Publisher: name: Figshare
Year: 2017
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Genetics
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Cancer
subject: Science Policy

description: The record of seizures attack of patients with SCN8A mutations. This file included the seizure frequency of patients with SCN8A mutations, at different periods. (DOCX 16Â kb)
Chromatic Cyclotomic Extensions
Creators: name: Carmeli, Shachar
name: Schlank, Tomer M.
name: Yanovski, Lior
Publisher: name: arXiv
Year: 2021
Subjects: subject: Algebraic Topology (math.AT)
subject: FOS: Mathematics
subject: 55P42

description: We construct Galois extensions of the T(n)-local sphere, lifting all finite abelian Galois extensions of the K(n)-local sphere. This is achieved by realizing them as higher semiadditive analogues of cyclotomic extensions. Combining this with a general form of Kummer theory, we lift certain elements from the K(n)-local Picard group to the T(n)-local Picard group.
description: 53 pages. Edited in response to comments of the referee. Fixed typos, some arguments expanded and made more precise, added details in section 5.2. Accepted to GnT
Ammobaculites formosensis Nakamura 1937
Creators: name: Lee, Somin Lee and Wonchoel
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Chromista
Foraminifera
Globothalamea
Lituolida
Lituolidae
Ammobaculites
Ammobaculites formosensis

description: 1. Ammobaculites formosensis Nakamura, 1937
(Plate 1. 1a- d)
Ammobaculites formosensis Nakamura, 1937, p. 133, pl. 10, figs. 1a-b (cited from Ellis and Messina, 1940); Scott et al., 2000, p. 5-6, figs. 1. 1-2; Debenay and Luan, 2006, p. 77, pl. 1, fig. 12; Garrett, 2010, p. 128, pl. 1, fig. 1; Wang et al., 2016, p. 4, pl. 2, fig. 20.
Material examined. 1 individual, Korea, East China Sea, station 16 (32°30ʹN, 124°00ʹE), 6 August 2019, by Smith-McIntyre grab, collected by Somin Lee and Nayeon Park, MABIK ID: MABIK PR00043230.
Diagnosis. Test is free, elongated, and rounded shape in cross section. In early stage, chambers are closely, planispirally coiled, and compressed. Later stage is composed of five cylindrical chambers uniserially arranged. Chamber width and height gradually increase as added in later cylindrical stage. Sutures are indistinct in early coiled stage, and coiling axis slightly depressed. Wall is agglutinated with fine to coarse sediment particles. Aperture is at the terminal and rounded shape. Test length is about 550 μm.
Remarks. This species resembles Ammobaculites agglutinans in general shape but differs from it in the smaller size of early coiled portion. The width of coiled portion in A. formosensis is almost the same or smaller than that of the final chamber. While the width of the coiled portion in A. agglutinans is larger than that of the final chamber. Additionally, the chamber width in the later stage of A. formosensis tends to increase as added, whereas it is constant in A. agglutinans.
A total of 44 modern species belonging to the genus Ammobaculites have been recorded worldwide, and seven species have been recorded in Korea (Hayward et al., 2018a; NIBR, 2019). Ammobaculites formosensis is originally reported from northern Taiwan (Ellis and Messina, 1940) in the East China Sea and has been documented in the Bohai Sea (Wang et al., 2016) and South China Sea: Mekong Delta (Debenay and Luan, 2006) and Pearl River (Garrett, 2010). This is the first report of A. formosensis from Korean waters.
Distribution. Korea and China.
description: Published as part of Lee, Somin Lee and Wonchoel, 2019, Three new records of recent benthic Foraminifera from Korea, pp. 389-394 in Journal of Species Research 8 (4) on pages 390-392, DOI: 10.12651/JSR.2019.8.4.389, http://zenodo.org/record/13161461
Upper bounds for the Lagrangian cobordism relation on Legendrian links
Creators: name: Sabloff, Joshua M.
name: Vela-Vick, David Shea
name: Wong, C. -M. Michael
Publisher: name: arXiv
Year: 2021
Subjects: subject: Geometric Topology (math.GT)
subject: FOS: Mathematics
subject: 57K33 (Primary) 57K10, 57D12 (Secondary)

description: Lagrangian cobordism induces a preorder on the set of Legendrian links in any contact 3-manifold. We show that any finite collection of null-homologous Legendrian links in a tight contact 3-manifold with a common rotation number has an upper bound with respect to the preorder. In particular, we construct an exact Lagrangian cobordism from each element of the collection to a common Legendrian link. This construction allows us to define a notion of minimal Lagrangian genus between any two null-homologous Legendrian links with a common rotation number.
description: 21 pages, 19 figures
Additional file 1: Figures S1â  S11. of DNA epigenome editing using CRISPR-Cas SunTag-directed DNMT3A
Creators: name: Yung-Hsin Huang
name: Jianzhong Su
name: Lei, Yong
name: Brunetti, Lorenzo
name: Gundry, Michael
name: Xiaotian Zhang
name: Jeong, Mira
name: Li, Wei
name: Goodell, Margaret
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Supplementary (PDF 3683 kb)
Cylindroclavulina bradyi
Creators: name: Lee, Somin Lee and Wonchoel
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Chromista
Foraminifera
Globothalamea
Textulariida
Valvulinidae
Cylindroclavulina
Cylindroclavulina bradyi

description: 2. Cylindroclavulina bradyi (Cushman, 1911)
(Plate 1. 2a- d)
Clavulina bradyi Cushman, 1911, p. 73 -74, figs. 118-119.
Cylindroclavulina bradyi: Bermúdez and Keys, 1952, p. 76; Loeblich and Tappan, 1987, p. 182, pl. 201, figs. 7-13; Jones, 1994, p. 53, pl. 48, figs. 32-38; Debenay, 2012, p. 79.
Material examined. 1 individual, Korea, East China Sea, station 10 (32°30ʹN, 127°00ʹE), 8 August 2019, by Smith-McIntyre grab, collected by Somin Lee and Nayeon Park, MABIK ID: MABIK PR00043231.
Diagnosis. Test is free, stout, elongated, and slightly tapering toward the rounded initial end. Chambers are not distinctly marked externally. Early triserial stage is not clearly observed in exterior, and the later portion is uniserial with slightly depressed sutures. Wall is composed of fine to coarse heterometric sediment grains and the test surface is greyish in color. Aperture is terminal, rounded, and somewhat flaring at the end of a short neck. Test length is about 2.95 mm.
Remarks. This species is originally classified as Clavulina bradyi by Cushman (1911), and later accepted to Cylindroclavulina bradyi as a type species of the genus Cylindroclavulina by Bermúdez and Keys (1952). There are four modern species belonging to this genus (Hayward et al., 2018b): C. atlantica, C. bradyi, C. elongata and C. ovata. Cylindroclavulina bradyi is morphologically most similar to C. elongata, but the latter has more narrowly elongate test, more distinct neck and teeth, and more loosely agglutinated test wall (Ellis and Messina, 1940). The present specimen is somewhat more elongated and slenderer than the type specimens described by Cushman (1911) and very similar to the specimens recorded by Jones (1994, plate 48, figure 32) and Debenay (2012).
Distribution. Korea, China, Japan, Micronesia, New Caledonia, and New Zealand.
Class Nodosariata Mikhalevich, 1992 emend. Rigaud et al., 2015
Order Vaginulinida Mikhalevich, 1993
Family Vaginulinidae Reuss, 1860
Genus Saracenaria Defrance, 1824
description: Published as part of Lee, Somin Lee and Wonchoel, 2019, Three new records of recent benthic Foraminifera from Korea, pp. 389-394 in Journal of Species Research 8 (4) on page 392, DOI: 10.12651/JSR.2019.8.4.389, http://zenodo.org/record/13161461
Additional file 1: Figures S1â  S11. of DNA epigenome editing using CRISPR-Cas SunTag-directed DNMT3A
Creators: name: Yung-Hsin Huang
name: Jianzhong Su
name: Lei, Yong
name: Brunetti, Lorenzo
name: Gundry, Michael
name: Xiaotian Zhang
name: Jeong, Mira
name: Li, Wei
name: Goodell, Margaret
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Supplementary (PDF 3683 kb)
Leptotrombidium (Leptotrombidium) dihumerale Traub and Nadchatram 1967
Creators: name: Nielsen, David H.
name: Robbins, Richard G.
name: Rueda, Leopoldo M.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Actinedida
Trombiculidae
Leptotrombidium
Leptotrombidium dihumerale

description: Leptotrombidium (Leptotrombidium) dihumerale Traub and Nadchatram, 1967b:
PAL
Leptotrombidium (Leptotrombidium) dihumerale dihumerale, Vercammen-Grandjean & Langston 1976
Montivagum dihumerale, Kudryashova 1988 a
Leptotrombidium (Leptotrombidium) dihumerale khurdangense, Vercammen-Grandjean & Langston 1976
Leptotrombidium dihumerale, Stekolnikov 2013 [abidi group]
description: Published as part of Nielsen, David H., Robbins, Richard G. & Rueda, Leopoldo M., 2021, Annotated world checklist of the Trombiculidae and Leeuwenhoekiidae (1758 - 2021) (Acari: Trombiculoidea), with notes on nomenclature, taxonomy, and distribution, pp. 1-243 in Zootaxa 4967 (1) on page 128, DOI: 10.11646/zootaxa.4967.1.1, http://zenodo.org/record/4745510
CMB Mode Coupling with Isotropic Polarization Rotation
Creators: name: Namikawa, Toshiya
Publisher: name: arXiv
Year: 2021
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: We provide a new analysis technique to measure the effect of the isotropic polarization rotation, induced by e.g. the isotropic cosmic birefringence from axion-like particles and a miscalibration of CMB polarization angle, via mode coupling in the cosmic microwave background (CMB). Several secondary effects such as gravitational lensing and CMB optical-depth anisotropies lead to mode coupling in observed CMB anisotropies, i.e., non-zero off-diagonal elements in the observed CMB covariance. To derive the mode coupling, however, we usually assume no parity violation in the observed CMB anisotropies. We first derive a new contribution to the CMB mode coupling arising from parity violation in observed CMB. Since the isotropic polarization rotation leads to parity violation in the observed CMB anisotropies, we then discuss the use of the new mode coupling for constraining the isotropic polarization angle. We find that constraints on the isotropic polarization angle by measuring the new mode-coupling contribution are comparable to that using the $EB$ cross-power spectrum in future high-sensitivity polarization experiments such as CMB-S4 and LiteBIRD. Thus, this technique can be used to cross-check results obtained by the use of the $EB$ cross-power spectrum.
description: 7 pages, 4 figures
Saracenaria hannoverana
Creators: name: Lee, Somin Lee and Wonchoel
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Chromista
Foraminifera
Nodosariata
Vaginulinida
Vaginulinidae
Saracenaria
Saracenaria hannoverana

description: 3. Saracenaria hannoverana (Franke, 1936)
(Plate 1. 3a-d)
Cristellaria (Saracenaria) hannoverana Franke, 1936, p. 98, pl. 9, fig. 3.
Saracenaria hannoverana: Zheng and Fu, 2008.
Material examined. 1 individual, Korea, East China Sea, station 22 (32°00ʹN, 126°30ʹE), 7 August 2019, by Smith-McIntyre grab, collected by Somin Lee and Nayeon Park, NIBR ID: NIBRPR0000109979.
Diagnosis. Test is free, elongate, triangular in cross-section, and curved at the basal part. Early portion is planispirally coiled and the later portion is uniserial. Sutures are slightly depressed and gently curved in lateral view. Test is composed of nine chambers, and chamber size gradually increases as added. Aperture is terminal, slightly produced, and radiate. Wall is calcareous, hyaline, and the surface is smooth. Test length is about 950 μm.
Remarks. This species is originally classified as belonging to subgenus Cristellaria (Saracenaria). According to Hayward et al. (2019), Saracenaria was upgraded to genus level by Zheng and Fu (2008) listing Saracenaria hannoverana as a valid species. This species has been reported from Chinese regions in the East China Sea (Hayward et al., 2018c) and this is the first report from Korea. According to NIBR (2019), four species belonging to Saracenaria have been reported in Korea: S. altifrons, S. angularis, S. italica, and S. latifrons. Saracenaria hannoverana differs from S. altifrons in the shorter and less inflated apertural face. Saracenaria hannoverana differs from S. angularis by having a smooth periphery without a keel. The present species also differs from S. italica by having a narrower apertural face and constant chamber width. Additionally, S. hannoverana differs from S. latifrons by having a shorter apertural face and a gently acute dorsal margin without keel.
Distribution. Korea and China.
description: Published as part of Lee, Somin Lee and Wonchoel, 2019, Three new records of recent benthic Foraminifera from Korea, pp. 389-394 in Journal of Species Research 8 (4) on page 392, DOI: 10.12651/JSR.2019.8.4.389, http://zenodo.org/record/13161461
Interleaving Mayer-Vietoris spectral sequences
Creators: name: Torras, Álvaro
name: Pennig, Ulrich
Publisher: name: arXiv
Year: 2021
Subjects: subject: Algebraic Topology (math.AT)
subject: FOS: Mathematics
subject: 55T, 18, 55N31

description: We discuss the Mayer-Vietoris spectral sequence as an invariant in the context of persistent homology. In particular, we introduce the notion of $\varepsilon$-acyclic carriers and $\varepsilon$-acyclic equivalences between filtered regular CW-complexes and study stability conditions for the associated spectral sequences. We also look at the Mayer-Vietoris blowup complex and the geometric realization, finding stability properties under compatible noise; as a result we prove a version of an approximate nerve theorem. Adapting work by Serre we find conditions under which $\varepsilon$-interleavings exist between the spectral sequences associated to two different covers.
description: 33 pages, 9 figures. Fixed typo in acknowledgements section
Habrocampulum
Creators: name: Shimizu, So
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Ichneumonidae
Habrocampulum

description: Key to the species of Habrocampulum
1. Propodeum elongate in dorsal view, coarsely reticulate, and with a distinct median longitudinal carina. Frons finely reticulate. Metasoma with PI=2.4–2.9. Nearctic and Western Palaearctic regions................. H. biguttatum (Gravenhorst, 1829)
- Propodeum rounded in dorsal view, median part covered with transverse carinae and lateral part covered with ladder-like furrow, without a median longitudinal carina (Fig. 5). Frons areolate-rugose to densely punctate (Figs 2, 3). Metasoma with PI=4.0. Eastern Palaearctic region (Japan).............................. H. shikaribetsensis (Uchida, 1958) comb. nov.
description: Published as part of Shimizu, So, 2016, Recognition of the genus Habrocampulum Gauld, 1976 (Hymenoptera: Ichneumonidae: Anomaloninae) from Japan, with a new combination and a key to the species, pp. 283-288 in Zootaxa 4103 (3) on page 284, DOI: 10.11646/zootaxa.4103.3.7, http://zenodo.org/record/267530
Habrocampulum Gauld 1976
Creators: name: Shimizu, So
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Ichneumonidae
Habrocampulum

description: Genus Habrocampulum Gauld, 1976
Habronyx (Habrocampulum) Gauld, 1976: 38. Type-species: Anomalon biguttatum Gravenhorst, 1829: 642. Habrocampulum Schnee, 1989: 245. New status, raised to genus from subgenus.
Diagnosis. This genus can be distinguished from other genera of Anomaloninae by the following combination of character states: (1) eyes bare; (2) lower margin of clypeus with a median apical tooth (Figs 2, 4); (3) frons with a median longitudinal carina (Figs 2, 3); (4) occipital carina complete (Figs 3–5); (5) mandible with two distinct teeth (Fig. 2); (6) upper margin of pronotum with a weak longitudinal impression (Fig. 5); (7) antero-ventral corner of pronotum with a tooth (Fig. 5); (8) mesoscutum rounded, and its anterior margin with a weak concavity (Fig. 5); (9) notauli present (Fig. 5); (10) epicnemial carina present, its upper end reaching front margin of mesopleuron at the level of lower end of pronotum (Fig. 5); (11) posterior transverse carina of mesosternum interrupted at the front of mid coxa; (12) scutellum convex (Fig. 5); (13) postscutellum longer than its width (Fig. 6); (14) fore wing with CI=0.8–1.1; (15) 2rs-m on fore wing straight; (16) hind wing with Cu1; (17) fore coxa smooth, without carina or its vestige; and (18) mid tibia with two spurs.
Distribution. Nearctic (Canada and United States of America) and Palaearctic (Belgium, Czech Republic, Czechoslovakia, Finland, France, Germany, Latvia, Netherlands, Poland, Russia, Spain, Sweden, and United Kingdom) regions (Yu et al. 2012). New to Japan.
Bionomics. Two noctuid moths (Agrotis segetum and Panolis flammea), four geometer moths (Bupalus piniarius, Caripeta divisata, Macaria granitata, and M. liturata), and a single lasiocampid moth (Dendrolimus pini) have been reported as hosts of H. biguttatum (Yu et al. 2012).
Remarks. This genus is closely related to Aphanistes, Barylypa, and Habronyx based on morphological characteristics (Gauld 1976). Japanese species of Habrocampulum have previously been misidentified as Aphanistes, because they are closely related and have common characteristics (e.g., anterior margin of mesoscutum with concavity and frons with a median longitudinal carina), but Habrocampulum can be distinguished from Aphanistes and the other Japanese genera of Anomaloninae by the following update key.
description: Published as part of Shimizu, So, 2016, Recognition of the genus Habrocampulum Gauld, 1976 (Hymenoptera: Ichneumonidae: Anomaloninae) from Japan, with a new combination and a key to the species, pp. 283-288 in Zootaxa 4103 (3) on page 285, DOI: 10.11646/zootaxa.4103.3.7, http://zenodo.org/record/267530
Deep learning of transition probability densities for stochastic asset models with applications in option pricing
Creators: name: Su, Haozhe
name: Tretyakov, M. V.
name: Newton, David P.
Publisher: name: arXiv
Year: 2021
Subjects: subject: Computational Finance (q-fin.CP)
subject: Numerical Analysis (math.NA)
subject: Probability (math.PR)
subject: Pricing of Securities (q-fin.PR)
subject: FOS: Economics and business
subject: FOS: Mathematics

description: Transition probability density functions (TPDFs) are fundamental to computational finance, including option pricing and hedging. Advancing recent work in deep learning, we develop novel neural TPDF generators through solving backward Kolmogorov equations in parametric space for cumulative probability functions. The generators are ultra-fast, very accurate and can be trained for any asset model described by stochastic differential equations. These are "single solve", so they do not require retraining when parameters of the stochastic model are changed (e.g. recalibration of volatility). Once trained, the neural TDPF generators can be transferred to less powerful computers where they can be used for e.g. option pricing at speeds as fast as if the TPDF were known in a closed form.
 We illustrate the computational efficiency of the proposed neural approximations of TPDFs by inserting them into numerical option pricing methods. We demonstrate a wide range of applications including the Black-Scholes-Merton model, the standard Heston model, the SABR model, and jump-diffusion models. These numerical experiments confirm the ultra-fast speed and high accuracy of the developed neural TPDF generators.
description: updated version
Layer dynamics for the one dimensional $\varepsilon$-dependent Cahn-Hilliard / Allen-Cahn equation
Creators: name: Antonopoulou, Dimitra
name: Karali, Georgia
name: Tzirakis, Konstantinos
Publisher: name: arXiv
Year: 2021
Subjects: subject: Analysis of PDEs (math.AP)
subject: FOS: Mathematics
subject: 35K55, 35K57, 35K40, 58J90

description: We study the dynamics of the one-dimensional $\varepsilon$-dependent Cahn-Hilliard / Allen-Cahn equation within a neighborhood of an equilibrium of $N$ transition layers, that in general does not conserve mass. Two different settings are considered which differ in that, for the second, we impose a mass-conservation constraint in place of one of the zero-mass flux boundary conditions at $x=1$. Motivated by the study of Carr and Pego on the layered metastable patterns of Allen-Cahn in [10], and by this of Bates and Xun in [5] for the Cahn-Hilliard equation, we implement an $N$-dimensional, and a mass-conservative $ N-1$-dimensional manifold respectively; therein, a metastable state with $N$ transition layers is approximated. We then determine, for both cases, the essential dynamics of the layers (ode systems with the equations of motion), expressed in terms of local coordinates relative to the manifold used. In particular, we estimate the spectrum of the linearized Cahn-Hilliard / Allen-Cahn operator, and specify wide families of $\varepsilon$-dependent weights $δ(\varepsilon)$, $μ(\varepsilon)$, acting at each part of the operator, for which the dynamics are stable and rest exponentially small in $\varepsilon$. Our analysis enlightens the role of mass conservation in the classification of the general mixed problem into two main categories where the solution has a profile close to Allen-Cahn, or, when the mass is conserved, close to the Cahn-Hilliard solution.
description: 55 pages, 1 figure
Harmonic Persistent Homology
Creators: name: Basu, Saugata
name: Cox, Nathanael
Publisher: name: arXiv
Year: 2021
Subjects: subject: Algebraic Topology (math.AT)
subject: FOS: Mathematics
subject: 55N31, 62R40

description: We introduce harmonic persistent homology spaces for filtrations of finite simplicial complexes. As a result we can associate concrete subspaces of cycles to each bar of the barcode of the filtration. We prove stability of the harmonic persistent homology subspaces under small perturbations of functions defining them. We relate the notion of "essential simplices" introduced in an earlier work to identify simplices which play a significant role in the birth of a bar, with that of harmonic persistent homology. We prove that the harmonic representatives of simple bars maximizes the "relative essential content" amongst all representatives of the bar, where the relative essential content is the weight a particular cycle puts on the set of essential simplices.
description: Final version
The string coproduct "knows" Reidemeister/Whitehead torsion
Creators: name: Naef, Florian
Publisher: name: arXiv
Year: 2021
Subjects: subject: Algebraic Topology (math.AT)
subject: FOS: Mathematics

description: We show that the string coproduct is not homotopy invariant. More precisely, we show that the (reduced) coproducts are different on $L(1,7)$ and $L(2,7)$. Moreover, the coproduct on $L(k,7)$ can be expressed in terms of the Reidemeister torsion and hence transforms with respect to the Whitehead torsion of a homotopy equivalence. The string coproduct can thereby be used to compute the image of the Whitehead torsion under the Dennis trace map.
Morse elements in Garside groups are strongly contracting
Creators: name: Calvez, Matthieu
name: Wiest, Bert
Publisher: name: arXiv
Year: 2021
Subjects: subject: Group Theory (math.GR)
subject: Geometric Topology (math.GT)
subject: FOS: Mathematics

description: We prove that in the Cayley graph of any braid group modulo its center $B_n/Z(B_n)$, equipped with Garside's generating set, the axes of all pseudo-Anosov braids are strongly contracting. More generally, we consider a Garside group $G$ of finite type with cyclic center. We prove that in the Cayley graph of $G/Z(G)$, equipped with the Garside generators, the axis of any Morse element is strongly contracting. As a consequence, we prove that Morse elements act loxodromically on the additional length graph of $G$.
description: 25 pages, 9 figures
Order of Zeros of Dedekind Zeta Functions
Creators: name: Hu, Daniel
name: Kaneko, Ikuya
name: Martin, Spencer
name: Schildkraut, Carl
Publisher: name: arXiv
Year: 2021
Subjects: subject: Number Theory (math.NT)
subject: FOS: Mathematics
subject: 11R42 (Primary) 20C15 (Secondary)

description: Answering a question of Browkin, we provide a new unconditional proof that the Dedekind zeta function of a number field $L$ has infinitely many nontrivial zeros of multiplicity at least 2 if $L$ has a subfield $K$ for which $L/K$ is a nonabelian Galois extension. We also extend this to zeros of order 3 when $\operatorname{Gal}(L/K)$ has an irreducible representation of degree at least 3, as predicted by the Artin holomorphy conjecture.
description: 9 pages
Tame and relatively elliptic $\mathbb{CP}^1$-structures on the thrice-punctured sphere
Creators: name: Ballas, Samuel A.
name: Bowers, Philip L.
name: Casella, Alex
name: Ruffoni, Lorenzo
Publisher: name: arXiv
Year: 2021
Subjects: subject: Geometric Topology (math.GT)
subject: Differential Geometry (math.DG)
subject: FOS: Mathematics
subject: 57M50, 30F30

description: Suppose a relatively elliptic representation $ρ$ of the fundamental group of the thrice-punctured sphere $S$ is given. We prove that all projective structures on $S$ with holonomy $ρ$ and satisfying a tameness condition at the punctures can be obtained by grafting certain circular triangles. The specific collection of triangles is determined by a natural framing of $ρ$. In the process, we show that (on a general surface $Σ$ of negative Euler characteristics) structures satisfying these conditions can be characterized in terms of their Möbius completion, and in terms of certain meromorphic quadratic differentials.
description: 58 pages, 19 figures, comments welcome. v2: added remarks 3.3.8 and 3.3.9; updated references; fixed minor typos and imprecisions. Final version to appear on Algebraic & Geometric Topology
Monopoles, twisted integral homology, and Hirsch algebras
Creators: name: Lin, Francesco
name: Eismeier, Mike Miller
Publisher: name: arXiv
Year: 2021
Subjects: subject: Geometric Topology (math.GT)
subject: Algebraic Topology (math.AT)
subject: FOS: Mathematics

description: We provide an explicit computation over the integers of the bar version $\overline{HM}_*$ of the monopole Floer homology of a three-manifold in terms of a new invariant associated to its triple cup product called extended cup homology. This refines previous computations over fields of characteristic zero by Kronheimer and Mrowka, who established a relationship to Atiyah and Segal's twisted de Rham cohomology, and characteristic two by Lidman using surgery techniques in Heegaard Floer theory. In order to do so, we first develop a general framework to study the homotopical properties of the cohomology of a dga twisted with respect a particular kind of Maurer-Cartan element called twisting sequence. Then, for dgas equipped with the additional structure of a Hirsch algebra (which consists of certain higher operations that measure the failure of strict commutativity, and related associativity properties), we develop a product on twisting sequences and a theory of rational characteristic classes. These are inspired by Kraines' classical construction of higher Massey products and may be of independent interest. We then compute the most important infinite family of such higher operations explicitly for the minimal cubical realization of the torus. Building on the work of Kronheimer and Mrowka, the determination of $\overline{HM}_*$ follows from these computations and certain functoriality properties of the rational characteristic classes.
description: v3: Corrected signs and added Section 4.2. To appear in Geometry & Topology
Leptotrombidium (Leptotrombidium) discrepans Fernandes and Kulkarni 2003
Creators: name: Nielsen, David H.
name: Robbins, Richard G.
name: Rueda, Leopoldo M.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Actinedida
Trombiculidae
Leptotrombidium
Leptotrombidium discrepans

description: Leptotrombidium (Leptotrombidium) discrepans Fernandes and Kulkarni, 2003:
PAL
Leptotrombidium discrepans, Stekolnikov 2013 [sinhgarhense group]
description: Published as part of Nielsen, David H., Robbins, Richard G. & Rueda, Leopoldo M., 2021, Annotated world checklist of the Trombiculidae and Leeuwenhoekiidae (1758 - 2021) (Acari: Trombiculoidea), with notes on nomenclature, taxonomy, and distribution, pp. 1-243 in Zootaxa 4967 (1) on page 128, DOI: 10.11646/zootaxa.4967.1.1, http://zenodo.org/record/4745510
On Reeb graphs induced from smooth functions on 3-dimensional closed manifolds which may not be orientable
Creators: name: Kitazawa, Naoki
Publisher: name: arXiv
Year: 2021
Subjects: subject: General Topology (math.GN)
subject: Geometric Topology (math.GT)
subject: FOS: Mathematics

description: The Reeb space of a smooth function is a topological and combinatoric object and fundamental and important in understanding topological and geometric properties of the manifold of the domain. It is the graph and a topological space endowed with a natural topology. This is defined as the quotient space of the manifold of the domain where the equivalence relation is as follows: two points in the manifold are equivalent if and only if they are in a same connected component of a level set or a preimage. In considerable cases they are graphs (Reeb graphs): if the function is a so-called Morse(-Bott) functions for example, then this is the graph such that a point is a vertex if and only if the corresponding connected component of the level set contains some singular points.
 The author previously constructed explicit smooth functions on suitable 3-dimensional connected, closed and orientable manifolds whose Reeb graphs are isomorphic to prescribed graphs and whose preimages are as prescribed types. This gives a new answer to so-called realization problems of graphs as Reeb graphs of smooth functions of suitable classes. The present paper concerns a variant in the case where the 3-dimensional manifolds may not be non-orientable extending the result before. \end{abstract}
description: 15 pages, this extends a main result of the paper (arXiv:1902.08841) of the author, accepted for publication by Topological Methods in Nonlinear Anal. recently, by applying some arguments here and new methods, this version is submitted to a refereed journal, the title has been changed
Current-induced breakdown of the quantum anomalous Hall effect
Creators: name: Lippertz, Gertjan
name: Bliesener, Andrea
name: Uday, Anjana
name: Pereira, Lino M. C.
name: Taskin, A. A.
name: Ando, Yoichi
Publisher: name: arXiv
Year: 2021
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Materials Science (cond-mat.mtrl-sci)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: The quantum anomalous Hall effect (QAHE) realizes dissipationless longitudinal resistivity and quantized Hall resistance without the need of an external magnetic field. However, when reducing the device dimensions or increasing the current density, an abrupt breakdown of the dissipationless state occurs with a relatively small critical current, limiting the applications of the QAHE. We investigate the mechanism of this breakdown by studying multi-terminal devices and identified that the electric field created between opposing chiral edge states lies at the origin. We propose that electric-field-driven percolation of two-dimensional charge puddles in the gapped surface states of compensated topological-insulator films is the most likely cause of the breakdown.
description: 15 pages total; 5 pages of main text with 4 figures, 10 pages of supplementary material with 11 figures
Additional file 4: of Repeat: a framework to assess empirical reproducibility in biomedical research
Creators: name: McIntosh, Leslie
name: Juehne, Anthony
name: Vitale, Cynthia
name: Xiaoyan Liu
name: Alcoser, Rosalia
name: J. Christian Lukas
name: Evanoff, Bradley
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: Science Policy

description: Appendix: RepeAT Framework, list of entirety of RepeAT framework variables with corresponding kappa values, percent rater agreement, and relation to transparency or accessibility. (DOCX 37 kb)
Multipath cohomology of directed graphs
Creators: name: Caputi, Luigi
name: Collari, Carlo
name: Di Trani, Sabino
Publisher: name: arXiv
Year: 2021
Subjects: subject: Algebraic Topology (math.AT)
subject: Combinatorics (math.CO)
subject: FOS: Mathematics
subject: 18G85, 05C20, 13D03

description: This work is part of a series of papers focusing on multipath cohomology of directed graphs. Multipath cohomology is defined as the (poset) homology of the path poset -- i.e., the poset of disjoint simple paths in a graph -- with respect to a certain functor. This construction is essentially equivalent, albeit more computable, to taking the higher limits of said functor on (a certain modification of) the path poset. We investigate the functorial properties of multipath cohomology. We provide a number of sample computations, show that the multipath cohomology does not vanish on trees, and that, when evaluated at the coherently oriented polygon, it recovers Hochschild homology. Finally, we use the same techniques employed to study the functoriality to investigate the connection with the chromatic homology of (undirected) graphs introduced by L. Helme-Guizon and Y. Rong.
description: 37 pages, 17 figures, 3 tables. Structure modified. Comments are welcome!
Hydraena premordica
Creators: name: Perkins, Philip D.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Hydraenidae
Hydraena
Hydraena premordica

description: Premordica Complex
Two species comprise the Premordica Complex: H. premordica, and H. ecuadormica (Figs. 114–115). These are medium sized (ca. 1.50–1.76 mm) species with a wide body form; the pronotum has a large fascia, and lacks a pronotal scintilla. The mesoventral intercoxal process is comparatively narrow, and the metaventrite has distinct plaques. The male genitalia in this complex (Figs. 116–117) have a basic plan similarity: the main piece is bulbous in the basal part (seen in lateral view) and has two long setae immediately distal to this part; the distal piece is largely membranous; the right paramere apically is distinctively shaped; and the left paramere is elongate. It is difficult to determine the location of the gonopore within the membranous distal piece. H. premordica is known from Trinidad and Tobago, and Guyana, whereas H. ecuadormica is currently known only from Ecuador.
description: Published as part of Perkins, Philip D., 2011, New records and description of fifty-four new species of aquatic beetles in the genus Hydraena Kugelann from South America (Coleoptera: Hydraenidae), pp. 1-198 in Zootaxa 3074 on page 55, DOI: 10.5281/zenodo.1050060