cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Pycnonotus cafer subsp. stanfordi Deignan 1949
Creators: name: LeCROY, M. A. R. Y.
Publisher: name: Zenodo
Year: 2003
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Aves
Passeriformes
Pycnonotidae
Pycnonotus
Pycnonotus cafer
Pycnonotus cafer stanfordi deignan

description: Pycnonotus cafer stanfordi Deignan
 Pycnonotus cafer stanfordi Deignan, 1949: 277 (Taro or Dalu, Upper Chindwin District, Sagaing Division, Burma).
 Now Pycnonotus cafer stanfordi Deignan, 1949. See Dickinson and Dekker, 2002b: 98–99, and Dickinson et al., 2002b: 122.
HOLOTYPE: AMNH 409420, adult male, collected at Taro (= Dalu), 26°20′N, 96°10′E (Deignan), Upper Chindwin District, Sagaing Division, Myanmar, on 10 February 1935, on the VernayHopwood Chindwin Expedition (no. 321).
COMMENTS: The AMNH number of the type was cited in the original description. Deignan labeled and initialed the specimens in his type series that he had borrowed from AMNH. Paratypes in AMNH are the following: males: Tengyeuh, AMNH 568733, 568734, 568739, and 568748; Chipwi, AMNH 307079; Seniku­Sh’ngaw Rd., AMNH 307078; Lonkin, AMNH 409418; Bhamo, AMNH 568723, and 568724; Taro (Dalu), AMNH 409421; Namyaseik, AMNH 409417; Aingma, AMNH 568711; ‘‘Moungon’’, AMNH 568712; Chaungzon, AMNH 568714; females: Tengyueh, AMNH 568736, and 568737; Washaung, AMNH 307080.
Mayr (1938: 278) gave the altitude of Dalu on the Chindwin River as 626 ft.
description: Published as part of LeCROY, M. A. R. Y., 2003, TYPE SPECIMENS OF BIRDS IN THE AMERICAN MUSEUM OF NATURAL HISTORY. PART 5. PASSERIFORMES: ALAUDIDAE, HIRUNDINIDAE, MOTACILLIDAE, CAMPEPHAGIDAE, PYCNONOTIDAE, IRENIDAE, LANIIDAE, VANGIDAE, BOMBYCILLIDAE, DULIDAE, CINCLIDAE, TROGLODYTIDAE, AND MIMIDAE, pp. 1-156 in Bulletin of the American Museum of Natural History 278 (278) on pages 79-80, DOI: 10.1206/0003-0090(2003)278<0001:tsobit>2.0.co;2, http://zenodo.org/record/13256611
Gene Insertion in the Podoviridae Phage GRCS Results in Osmotically Sensitive Instability.
Creators: name: Ferullo, Daniel J.
name: Radding, Jeffrey A.
Publisher: name: Journal of Targeting Infectiuos Diseases
Year: 2016

description: EnBiotix is developing engineered phage expressing biofilm-dispersing enzymes for treating implant-associated infections of Staphylococcus aureus (Sau).  Phage GRCS belongs to a family of related Podoviridae/Picovirinae staphylococcal dsDNA phages utilizing 5’-terminal proteins for replication and packaging [1,2]. GRCS preferably infects clinical isolates of Sau from prosthetic joint infections (PJI) [3].Objective. To insert trans-genes into the GRCS genome, while maintaining stable phage production.Methodology. The 18Kb phage genome, assembled in vitro in a bacterial artificial chromosome (BAC) was transformed into E. coli, amplified and isolated [4]. Transformation of GRCS/BAC into Sau lysed the liquid culture. Plaques from solid agar confirmed as GRCS phage by PCR.  Reporter gene (GFP) inserted into GRCS/BAC yielded phage plaques on Sau for analysis.Results. Plaques isolated from solid agar were natural phage, indicating loss of the GFP-gene.  Liquid cultures resulted in a mixed phage population (natural and engineered). The proportion of engineered phage improved dramatically by increasing osmotic pressure using sucrose, but was lost in plating on solid agar [5].Conclusion. Insertion of trans-genes into GRCS proved unstable. External osmotic pressure can counterbalance this instability.  Stabilizing engineered phage will require selection against natural phage, coupled to evolution of engineered phage by serial passage through decreasing osmolarity.
description: Journal of Targeting Infectiuos Diseases, Vol 1, No 1 (2016)
Empiriværksted
Creators: name: Skibsted, Else
name: Munkholm, Merete
Publisher: name: CEPRA-striben
Year: 2022

description: Artiklen bygger på erfaringer fra et empiriværksted, hvor forskere og lærere sammen afprøver og udvikler forskellige forståelser af børns deltagelsesmuligheder på kanten af skolelivets fællesskaber. Artiklen undersøger og diskuterer, om og hvordan empiriværkstedet kan bidrage til en kvalificering af lærerens arbejde med børns fællesskaber og deltagelsesmuligheder i skolelivet. Indledningsvis beskriver vi kort empiriværkstedets formål og form. Derefter uddybes det teoretiske og metodiske grundlag, som danner baggrund for empiriværkstedets tilblivelse og analyser af to udvalgte empiriske nedslag. Afslutningsvis samler vi op på empiriværkstedets potentialer og diskuterer nogle af de spørgsmål, som samarbejdet i empiriværkstedet har afledt. Nøgleord: empiriværksted, fællesskab, deltagelse, affekt, fortolkningsrepertoire, video
description: CEPRA-striben, Nr. 30 (2022): På kanten af fællesskaber eller fællesskaber på kanten (NUBU Særnummer)
The Enterococcus faecalis Phage phiEf11 Amidase Endolysin
Creators: name: Stevens, Roy Harris
name: Zhang, Hongming
name: Buttaro, Bettina
Publisher: name: Journal of Targeting Infectiuos Diseases
Year: 2016

description: fEf11 is a temperate Siphoviridae bacteriophage that infects strains of Enterococcus faecalis (Stevens et al 2009). The fEf11 genome, consisting of 65 Open Reading Frames, is contained within 42,822 bps of DNA (Stevens et al 2011). Within this genome, a module of 6 lysis-associated genes was identified. Based upon sequence homology, one of these genes, ORF28, was predicted to code for a 46.133 kDa amidase type endolysin, composed of 421 amino acids. ORF28 was PCR-amplified, fused to a Glutathione S-Transferase (GST) tag in an expression vector, and electroporated into E. coli. The expressed ORF28 product was purified to homogeneity from an E. coli sonic extract by affinity chromatography through an immobilized Glutathione column. The purified protein, desorbed from the affinity column, exhibited a mobility in SDS-PAGE consistent with a 46.13 kDa protein combined with the 26.40 kDa GST protein. It produced rapid and profound lysis in E. faecalis cell populations, and was active against 46 out of 93 (49.5%) E. faecalis strains tested. Furthermore, it caused substantial destruction of E. faecalis biofilms. Amino acid sequence comparisons revealed varying degrees (10% to 21%) of partial identity between the fEf11 ORF28 endolysin and those of other enterococcal bacteriophages.
description: Journal of Targeting Infectiuos Diseases, Vol 1, No 1 (2016)
IMPLICATING GENOMICS IN UNDERSTANDING OF NEW RESISITANT TRAITS OF ANTIBIOTICS: A CRITICAL ANALYSIS
Creators: name: Eweka, Uvbi Juliet
name: Akeni, Omena Augustine
Publisher: name: Journal of Targeting Infectiuos Diseases
Year: 2016

description: The degree of antibiotic resistance over the years has drawn attention of researches on bacterial genomes as serious scientific tool in the pharmacology.  With increasing constant emergence of infectious strains that are resistant to antibiotics, and the cost effect to patients and the research industry, the challenges antibiotic resistance deposed on the health industry is decried in quantum. With the discovery of a new instance of an antibiotic resistant  strains; scientific genomic knowledge has become essential pharmacological tool in investigation into the inhibited space of antibiotic resistant mechanism. The paper focuses specific attention on recent research in Genome-scale interrogation as an insight tool into the dynamic mechanisms of antibiotic resistance. The paper further drawn on Transcriptomics as a vehicle for further investigation into resistance mechanism. The argument been, that not only can transcription profiling is successful, but also reveal the role of mfd gene, a factor its believed is involved in strand-specific DNA repair, as it is also seen to be consistent in generation of fluoroquinolone resistance.
description: Journal of Targeting Infectiuos Diseases, Vol 1, No 1 (2016)
Etniske minoritetsdrenges læring i folkeskolen
Creators: name: Frederiksen, Pia Susanne
name: Løkkegaard, Lene
name: Ørnemose Rasmussen, Anna
Publisher: name: CEPRA-striben
Year: 2022

description: Igennem en årrække har målinger vist, at etniske minoritetsdrenge er udfordret i deres skolegang i Danmark, og at deres læringsudbytte er lavere end etnisk danske elevers. I denne artikel afrapporteres fund fra et kvalitativt studie, der undersøger faktorer i skolens didaktiske rammesætning og den betydning, de kan have for disse drenges faglige udbytte. Fundene viser på den ene side, at de etniske minoritetsdrenge i indskolingen oplever faglige udfordringer og mangel på stilladsering. På den anden side viser de, at det faglige indhold i læremidler og den didaktiske praksis fra lærernes side overvejende er præget af en assimilationsorienteret monokulturel tænkning. Begge dele synes at kunne have en negativ effekt på drengenes læringsudbytte.
description: CEPRA-striben, Nr. 30 (2022): På kanten af fællesskaber eller fællesskaber på kanten (NUBU Særnummer)
Det bedste og det værste
Creators: name: Rasmussen, Lene Kofoed
Publisher: name: CEPRA-striben
Year: 2022

description: Denne artikel bygger på interviews fra et projekt om forebyggelse af ekstremisme online blandt børn og unge. Den sætter fokus på børn og unges udsathed over for ekstremisme – set i lyset af den følelsesøkonomi, som hersker online. Analysen drejer sig om de følelser af nærhed og had, som syv unge forbinder med deres onlineliv, og om hvorvidt ekstremisme online giver efterklang i de unges hverdagsliv. Formålet er at kvalificere ændrede mønstre i udsathed over for ekstremisme. På den baggrund perspektiveres til den pædagogiske opgave for de fagprofessionelle, der arbejder med børn og unge. Nøgleord: sociale medier, børn og unges onlineliv, ekstremisme online, ny udsathed, affektiv økonomi.
description: CEPRA-striben, Nr. 30 (2022): På kanten af fællesskaber eller fællesskaber på kanten (NUBU Særnummer)
A Proteus mirabilis phage cocktail to prevent Catheter-associated Urinary Tract Infections
Creators: name: Melo, Luís
name: Veiga, Patricia
name: Cerca, Nuno
name: Kropinski, Andrew M.
name: Almeida, Carina
name: Azeredo, Joana
name: Sillankorva, Sanna
Publisher: name: Journal of Targeting Infectiuos Diseases
Year: 2016

description: Proteus mirabilis is an enterobacterium that causes catheter-associated urinary tract infections (CAUTIs) due to its ability to form crystalline biofilms on the surfaces1,2. These CAUTIs are very difficult to treat, since the biofilm structures are extremely tolerant to high concentrations of antibiotics. Bacteriophages (phages) have been used widely to control and prevent a diversity of bacterial species, however few P. mirabilis phages have been isolated and studied. Here we report the isolation of two novel virulent phages, the myovirus vB_PmiM_5460 and the podovirus vB_PmiP_5461 able to target respectively 57% and 100% of all Proteus strains tested in this study. Both phages have been characterized thoroughly and sequencing data revealed no lysogeny associated genes. To further evaluate the phages ability to prevent catheter colonization by Proteus, phages adherence to silicon surfaces was assessed. Both phages were able to adhere, but the extent of adhesion was found to be phage dependent. Further tests in phage-coated catheters using a dynamic biofilm model simulating CAUTIs, have shown a 90% significant reduction of P. mirabilis biofilm formation up to 168h of catheterization. These results highlight the potential usefulness of the two isolated phages for the prevention of surface colonization by this bacterium.
description: Journal of Targeting Infectiuos Diseases, Vol 1, No 1 (2016)
At blive en dygtig elev
Creators: name: Lundqvist, Ulla
Publisher: name: CEPRA-striben
Year: 2022

description: At blive en dygtig elev handler ikke kun om faglig præstation. Det er også en social identitet, som skabes kontekstuelt mellem lærere og elever. Disse sociale processer kan være problematiske, og de er vanskelige at få øje på for læreren, der er bundet af undervisningens handletvang. Denne artikel undersøger, hvordan en elevs sociale identitet kan ændre sig fra ”dygtig” til ”lærerens favorit”. Analysen viser, hvordan en dreng gennemgår sådan en identifikationsproces i løbet af folkeskolens mellemtrin, og hvordan processen får utilsigtede negative konsekvenser. Artiklen er et bidrag til debatten om, hvilke sociale processer der kan nedbryde eller understøtte konstruktive klassefællesskaber. Nøgleord: etnografi, identitet, dygtig, pædagogisk samtale, klassefællesskab
description: CEPRA-striben, Nr. 30 (2022): På kanten af fællesskaber eller fællesskaber på kanten (NUBU Særnummer)
Combining bacteriophages and Portuguese honey for biofilm control
Creators: name: Oliveira, Ana
name: Ribeiro, Henrique
name: Henriques, Ana
name: Sillankorva, Sanna
Publisher: name: Journal of Targeting Infectiuos Diseases
Year: 2016

description: The rising of multi-resistant bacteria due to antibiotics’ misuse and the lack of new antimicrobial molecules represent a serious threat to Medicine.
Many of these multi-resistant bacteria are pathogens responsible for nosocomial infections causing public health problems. This work addresses the problematic of treating chronic wounds, where bacteria colonize the tissues and form biofilms, conditioning the antibiotics’ effectiveness.
Based on this reality, a combination of two antimicrobial solutions, bacteriophages (phages) and honey, is suggested as a new approach to treat multi-resistant bacteria. Bacteriophages (phages) are natural bacteria predators that specifically recognize and lyse them. Honey is not only able to destroy bacteria, but also to degrade biofilms, improving the healing process and promoting tissue regeneration. Both are efficient against antibiotic-resistant microorganisms, including those present in chronic wounds.

To date there is no study about this combinatorial therapy. Our study revealed a high anti-biofilm effect of the combination between Portuguese honey and lytic phages in Escherichia coli and Pseudomonas aeruginosa biofilms. Particularly in E. coli, the honey effect was improved when used in combination with a phage (a reduction higher than 3-log for honey and of at least 4-log for the combined products).
description: Journal of Targeting Infectiuos Diseases, Vol 1, No 1 (2016)
Vores dreng er langsom
Creators: name: Emtoft, Laura
name: Ørtoft, Sandra Bruus
Publisher: name: CEPRA-striben
Year: 2022

description: I artiklen undersøger vi, hvilke positioneringer og deltagelsesmuligheder behandlingsfællesskaber tilbyder børn og unge i psykisk mistrivsel og deres forældre med henblik på at få begge parter til at indgå i skolens fællesskab. Analysen af datamaterialet peger på, at forældrene oplever at blive deltagere i et behandlingsfællesskab og tilskriver dette mening. Forældrene oplever forskellige positioneringsmuligheder, som afhænger af, hvorvidt deres barn kommer i bedre trivsel gennem behandlingsforløbet. Dermed kommer behandlingsfællesskaber til at fremstå tveæggede, fordi de for nogle børn og deres forældre tilbyder øget trivsel, nye kompetencer og positioneringsmuligheder, mens de for andre børn og forældre bidrager til en yderligere marginalisering. Nøgleord: psykisk mistrivsel, lettere behandling, fællesskaber, PPR, forældre, skole
description: CEPRA-striben, Nr. 30 (2022): På kanten af fællesskaber eller fællesskaber på kanten (NUBU Særnummer)
Phage endolysin and its antibacterial activity depend on E19 and D34 amino acid residues.
Creators: name: Easwaran, Maheswaran
Publisher: name: Journal of Targeting Infectiuos Diseases
Year: 2016

description: Objectives: Bacteriophage-encoded peptidoglycan hydrolases (Phage endolysin) are mostly acknowledged antimicrobial agents in recent years. Our result demonstrates antibacterial activity of recombinant endolysin pEcLy, and its essential active residues for the cleavage of bacterial peptidoglycan (PG).
 Methods: Phage endolysin was cloned, over-expressed and analyzed the activity of purified protein by in vitro studies [1] and site-directed mutagenesis (SDM) [2,3]. Moreover, the distinguished structural and functional mechanism of recombinant endolysin was predicted by docking studies.
 Results: Bacterial membrane permeability study and in vitro analysis revealed that endolysin is an undoubtedly a new target for the treatment of invasive bacterial infections. The crystal structures were concluded that the functionally important active residues E19 and D34, which were responsible for the hydrolyses of β-1,4 glycosidic bond of PG layer. SDM results demonstrated that the wild-type active residues like E19 and D34 had a maximum lytic activity compare with mutants (E19D, E19K, D34E & D34H).
 Conclusion: Bacterial membrane recognition, destroy the whole bacterial cells and completely subverted phage resistance mechanisms were the most remarkable attributes of recombinant endolysin. This kind of proteins offers exciting new therapeutic possibilities.
description: Journal of Targeting Infectiuos Diseases, Vol 1, No 1 (2016)
Pycnonotus barbatus subsp. nigeriae Hartert
Creators: name: LeCROY, M. A. R. Y.
Publisher: name: Zenodo
Year: 2003
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Aves
Passeriformes
Pycnonotidae
Pycnonotus
Pycnonotus barbatus
Pycnonotus barbatus nigeriae hartert

description: Pycnonotus barbatus nigeriae Hartert
 Pycnonotus barbatus nigeriae Hartert, 1921b: 126 (Degama).
 Now Pycnonotus barbatus gabonensis Sharpe, 1871. See Keith et al., 1992: 366.
HOLOTYPE: AMNH 567799, adult female (not male), collected at Degema, 04°45′N, 06°49′E (Times Atlas), Nigeria, on 23 May 1902, by William J. Ansorge (no. 478). From the Rothschild Collection.
COMMENTS: Ansorge’s field number of the type is given in the original description. Originally published as a male, this specimen was sexed as a female by Ansorge. His symbol used on the label was an upside­down male symbol, first misinterpreted but later corrected by Hartert (1928: 223). Hartert (1921b: 126) mentioned 24 paratypes; these are AMNH 567800–567823.
See Pasquet et al. (2001) for the results of recent DNA studies.
description: Published as part of LeCROY, M. A. R. Y., 2003, TYPE SPECIMENS OF BIRDS IN THE AMERICAN MUSEUM OF NATURAL HISTORY. PART 5. PASSERIFORMES: ALAUDIDAE, HIRUNDINIDAE, MOTACILLIDAE, CAMPEPHAGIDAE, PYCNONOTIDAE, IRENIDAE, LANIIDAE, VANGIDAE, BOMBYCILLIDAE, DULIDAE, CINCLIDAE, TROGLODYTIDAE, AND MIMIDAE, pp. 1-156 in Bulletin of the American Museum of Natural History 278 (278) on page 80, DOI: 10.1206/0003-0090(2003)278<0001:tsobit>2.0.co;2, http://zenodo.org/record/13256611
Treatment with Pf4 Bacteriophage Produced by Pseudomonas aeruginosa Inhibits Aspergillus fumigatus
Creators: name: Bollyky, Paul L
Publisher: name: Journal of Targeting Infectiuos Diseases
Year: 2016

description: Pseudomonas aeruginosa (Pa) and Aspergillus fumigatus (Af) are major human pathogens known to interact in a variety of disease settings, including airway infections in cystic fibrosis (CF). We recently reported that clinical isolates of Pa inhibit the formation and growth of Af biofilms (Ferreira et al., 2015). Here, we report that Pa strain PAO1 produces a bacteriophage, Pf4, which inhibits the metabolic activity of Af biofilms. This phage-mediated inhibition was more pronounced against preformed Af biofilm than against planktonic growth. Pf4 attaches to Af hyphae, suggesting that Pf4-mediated inhibition of Af may occur at the biofilm surface. We show Pf4 sequesters iron, thus denying Af a crucial resource. Consistent with this, the effect of Pf4 on Af metabolism could be overcome with supplemental iron. This is the first report of a bacterial phage that inhibits the growth of a fungus and the first description of a phage behaving as an iron chelator in a biological system.  These findings may be relevant to microbial ecology of CF, and to the treatment of Af.
description: Journal of Targeting Infectiuos Diseases, Vol 1, No 1 (2016)
Børn og unges onlinefællesskaber på kanten
Creators: name: Peters, Rikke Alberg
name: Petersen, Kit Stender
Publisher: name: CEPRA-striben
Year: 2022

description: Formålet med denne artikel er at beskrive børn og unges onlinefællesskaber ”på kanten” med særligt fokus på de dynamikker, som kan føre til polarisering og/eller onlinehad. Artiklens vidensgrundlag bygger på en desk research (Kortlægning af viden om forebyggelse af ekstremisme online blandt børn og unge, Petersen og Peters, 2020) og to fokusgruppeinterviews med syv unge. I artiklen diskuterer vi desuden, hvordan vi kan forstå begrebet udsathed i forhold til ekstremisme online, ligesom vi med udgangspunkt i begreberne rationel nysgerrighed og dialogisk rum (dialogical space) præsenterer en tilgang til, hvordan fagprofessionelle og andre voksne kan blive bedre klædt på til at engagere sig i dialoger med børn og unge, så forebyggelsesarbejdet kan lykkes bedre. Nøgleord: onlineliv, inklusion, eksklusion, onlinehad, forebyggelse, dialog, rationel nysgerrighed.
description: CEPRA-striben, Nr. 30 (2022): På kanten af fællesskaber eller fællesskaber på kanten (NUBU Særnummer)
Engineering Antigen-Displayed Phage as Vaccines
Creators: name: KOSTRIKIS, LEONDIOS
Publisher: name: Journal of Targeting Infectiuos Diseases
Year: 2016

description: Human immunodeficiency virus (HIV), the virus that causes AIDS, remains a central element in the pursuit to control the pandemic. Currently, there is ever-increasing evidence that sexual transmission is the major route of HIV infections among newly infected people, especially in less developed countries. All vaccine strategies are currently focused on the systemic immunity against HIV, but so far, there has been limited research effort in developing vaccination strategies to protect against HIV infection transmitted through the cervico-vaginal or the intestinal mucosa (sexual transmission). It is critical though that the first line of defense against HIV-1 should be at site of virus entry. As part of our ongoing research project, we are re-engineering symbiotic enteric phage to create a novel vaccination strategy for the prevention of sexual transmission of HIV. Nonpathogenic F-specific filamentous bacterial viruses or Inoviruses that infect enteric F+ E. coli strains residing symbiotically in human mucosal sites offer an attractive and natural live antigen delivery system to deliver HIV-1 antigens and to stimulate mucosal immunity and protect against HIV-1 sexual transmission. This initial research project also has broader implications for development of human vaccines against other sexually transmitted agents.
description: Journal of Targeting Infectiuos Diseases, Vol 1, No 1 (2016)
Modification of Escherichia coli-bacteriophage interactions by surfactants and antibiotics in vitro
Creators: name: Scanlan, Pauline Deirdre
name: Bischofberger, Anna
name: Hall, Alex
Publisher: name: Journal of Targeting Infectiuos Diseases
Year: 2016

description: Although studies of microbial populations indicate that the abiotic environment plays an important role in bacterial interactions with their parasitic viruses (bacteriophages or phages), it is not yet clear how exposure to compounds present in nature alters the impact of phages on bacterial growth and evolution. To address this question we exposed Escherichia coli, in combination with three lytic phages, to various substances that natural and clinical microbial populations are likely to encounter: bile salts (present in mammalian gastrointestinal tracts), sodium dodecyl sulfate (SDS, a common surfactant in cleaning and hygiene products), and four antibiotics (present at variable concentrations in natural and clinical environments). Our results show that bile salts and SDS can reduce the detrimental effect of phages on bacterial growth. In some cases these compounds completely mitigated any negative effects of phage on bacterial growth and consequently bacteria did not evolve resistance to phages in these conditions. The proportional effects of phages were unaffected by antibiotics in most combinations, excepting three cases of phage-drug synergy. These results suggest accounting for interactions between phages and environmental factors such as surfactants and antibiotics will improve understanding of both bacterial growth and resistance evolution to phages in vivo and in nature.
description: Journal of Targeting Infectiuos Diseases, Vol 1, No 1 (2016)
Os og dem
Creators: name: Jensen, Ulla Højmark
name: Helms, Stine Constance
Publisher: name: CEPRA-striben
Year: 2022

description: Hvilke fællesskabsorienterede dynamikker og konsekvenser er på spil, når skolen gennemfø-rer uddannelsesparathedsvurderinger? Med afsæt i en interviewundersøgelse af elever og professionelle, sætter vi i denne artikel fokus på de komplekse sociale og faglige in- og eksklusi-onsprocesser, som foregår i elevfællesskaberne i udskolingen i forbindelse med uddannelses-parathedsvurderingen. Erving Goffmans begreb stigma og Basil Bernsteins begreb klassifikationanvendes som analyseledende begreber for at se nærmere på, hvilke betydninger uddannel-sesparathedsvurderingen kan have for såvel den enkelte unge som for elevfællesskaberne i skolen. Nøgleord: elevfællesskaber, uddannelses-parathedsvurdering, stigma, klassifikation
description: CEPRA-striben, Nr. 30 (2022): På kanten af fællesskaber eller fællesskaber på kanten (NUBU Særnummer)
Pycnonotus dodsoni subsp. teitensis van Someren
Creators: name: LeCROY, M. A. R. Y.
Publisher: name: Zenodo
Year: 2003
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Aves
Passeriformes
Pycnonotidae
Pycnonotus
Pycnonotus dodsoni
Pycnonotus dodsoni teitensis van someren

description: Pycnonotus dodsoni teitensis van Someren
 Pycnonotus dodsoni teitensis van Someren, 1922: 190 (Tsavo).
 Now Pycnonotus barbatus dodsoni Sharpe, 1895. See Hartert, 1928: 222, and Keith et al., 1992: 366.
HOLOTYPE: AMNH 568159, adult male, collected at Tsavo, 02°59′S, 38°28′E (Times Atlas), Kenya, on 26 March 1918, by Victor G.L. van Someren. From the Rothschild Collection.
 COMMENTS: In the original description, van Someren (1922: 190) said that the type, collected on 26 March 1918, was in the Rothschild Collection and listed eight specimens of P. d. teitensis. Three came to AMNH. The above specimen is the only one from Tsavo collected on 26 March. Paratypes in AMNH are AMNH 568160 and 568161.
 Sibley and Monroe (1990: 583) treated dodsoni as a species in the superspecies cafer. See Pasquet et al. (2001) for the results of recent DNA studies.
description: Published as part of LeCROY, M. A. R. Y., 2003, TYPE SPECIMENS OF BIRDS IN THE AMERICAN MUSEUM OF NATURAL HISTORY. PART 5. PASSERIFORMES: ALAUDIDAE, HIRUNDINIDAE, MOTACILLIDAE, CAMPEPHAGIDAE, PYCNONOTIDAE, IRENIDAE, LANIIDAE, VANGIDAE, BOMBYCILLIDAE, DULIDAE, CINCLIDAE, TROGLODYTIDAE, AND MIMIDAE, pp. 1-156 in Bulletin of the American Museum of Natural History 278 (278) on pages 80-81, DOI: 10.1206/0003-0090(2003)278<0001:tsobit>2.0.co;2, http://zenodo.org/record/13256611
Examining the additivity of peak heights in forensic DNA profiles
Creators: name: Cheng, Kevin
name: Bright, Jo-Anne
name: Kerr, Zane
name: Taylor, Duncan
name: Ciecko, Anne
name: Curran, James
name: Buckleton, John
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Plant Biology

description: It is routinely assumed when interpreting forensic DNA profiles that peaks of the same molecular size, whether allelic or stutter in origin, ‘stack’. That is, the height of a composite peak is approximately equal to the sum of its parts. There is strong theoretical reason to believe that this assumption should hold across the range of peak heights where fluorescent response is linear with respect to template. However, recent publications have called for empirical proof of, or directly questioned, this assumption. In this study we have examined the heights of allelic, stutter, and composite peaks, and demonstrate that peak heights are reliably predicted as the sum of their individual components. This work supports the long-held belief that peak heights ‘stack’ in an additive fashion.
Estimation of sex from metatarsals using discriminant function and logistic regression analyses
Creators: name: Bidmos, M. A.
name: Adebesin, A. A.
name: Mazengenya, P.
name: Olateju, O. I.
name: Adegboye, O.
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: South Africa has one of the highest crime rates in the world and the discovery of dismembered bodies for human identification process poses a greater challenge. The South African Africans (also known as South African blacks) population group is often the victims of crimes as they are the largest group. While measurements of several bones of the human skeleton have been used for sex estimation, the potential of metatarsals have not been explored in this population group. Metatarsal bones are usually well-preserved since they are recovered in shoes protected from scavengers and they are able to withstand environmental degradation and taphonomy. This study investigated the potential of measurements of metatarsals in sex estimate amongst South African Africans using logistic and discriminant function analysis. Six measurements of metatarsals from 100 individuals of known sex and population affinity from the Raymond Dart Collection of Human skeletons were analysed. Various combinations of measurements of metatarsal bones yielded suitably high average accuracies (79% to 84%) for sex estimation and are comparable to functions derived from other skeletal elements of South African Africans. Metatarsals of South African Africans are therefore useful as alternatives to highly sexual dimorphic bones in the forensic estimation of sex.
Pycnonotus urostictus subsp. atricaudatus Parkes 1967
Creators: name: LeCROY, M. A. R. Y.
Publisher: name: Zenodo
Year: 2003
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Aves
Passeriformes
Pycnonotidae
Pycnonotus
Pycnonotus urostictus
Pycnonotus urostictus atricaudatus parkes

description: Pycnonotus urostictus atricaudatus Parkes
 Pycnonotus urostictus atricaudatus Parkes, 1967: 24 (San Isidro, Samar Island, Philippines).
 Now Pycnonotus urostictus atricaudatus Parkes, 1967. See Dickinson and Dekker, 2002b: 100, and Dickinson et al., 2002b: 124.
HOLOTYPE: AMNH 708417, adult male, collected at San Isidro, 12°22′N, 124°22′E (Dickinson et al., 1991: 424), Samar Island, Philippines, on 20 April 1957, by D.S. Rabor (no. 15046).
COMMENTS: The AMNH number of the type was listed in the original description. Parkes (1967: 25) borrowed specimens from a number of museums when describing this taxon, and it is no longer possible to tell which AMNH specimens, other than the holotype, that he had in hand when he named the taxon.
description: Published as part of LeCROY, M. A. R. Y., 2003, TYPE SPECIMENS OF BIRDS IN THE AMERICAN MUSEUM OF NATURAL HISTORY. PART 5. PASSERIFORMES: ALAUDIDAE, HIRUNDINIDAE, MOTACILLIDAE, CAMPEPHAGIDAE, PYCNONOTIDAE, IRENIDAE, LANIIDAE, VANGIDAE, BOMBYCILLIDAE, DULIDAE, CINCLIDAE, TROGLODYTIDAE, AND MIMIDAE, pp. 1-156 in Bulletin of the American Museum of Natural History 278 (278) on page 81, DOI: 10.1206/0003-0090(2003)278<0001:tsobit>2.0.co;2, http://zenodo.org/record/13256611
Impact of virulent bacteriophages on Vibrio cholerae infection and their use in preventing cholera
Creators: name: Yen, Minmin
name: Cairns, Lynne
name: Camilli, Andrew
Publisher: name: Journal of Targeting Infectiuos Diseases
Year: 2016

description: Cholera is a severe human diarrheal disease caused by the bacterium Vibrio cholerae and is a substantial health burden on the developing world. It has been hypothesized that virulent bacteriophages (phages) play a crucial role in modulating the dynamics of cholera epidemics and may impact the evolution of epidemic strains. From patient rice-water stools in Bangladesh and Haiti, we have isolated three distinct species of virulent phages that prey extensively on V. cholerae within the human gastrointestinal tract. From genetic and phenotypic analyses, we have determined the receptors to be the LPS O1 antigen and the major outer membrane porin OmpU. By combining the three phages, we have developed a cocktail that can be retained in the small intestine of infant mice and infant rabbits for at least 24 hours. Prophylactic treatment of animals for at least 24 hours prior to V. cholerae challenge can prevent colonization in the infant mouse model and cholera in the infant rabbit model. We hypothesize prophylactic use of this cocktail in humans could reduce the severity of the cholera burden in developing countries.
description: Journal of Targeting Infectiuos Diseases, Vol 1, No 1 (2016)
Supplementary document for Machine learning-assisted design of polarization-controlled dynamically switchable full-color metasurfaces - 5915794.pdf
Creators: name: hu, lechuan
name: Ma, Lanxin
name: Chengchao, Wang
name: LIU, LINHUA
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: Supplemental Document
Production of GMP-grade bacteriophages for clinical trials
Creators: name: Bretaudeau, Laurent
name: Larrieu, Audrey
name: Arnaud, Isabelle
Publisher: name: Journal of Targeting Infectiuos Diseases
Year: 2016

description: The perspective of using bacteriophages to fight against multiresistant bacteria has re-gained significant interest in many countries. In the European Union (EU), there is no specific regulatory framework, for both the use and the production of the phages.
 Regarding the pharmaceutical classification, phages fall in the categories of anti-infectious products and of biological products, given the intended use and their live nature. In addition, the compliance to the Good Manufacture Practices (GMP) is a requirement for any medicinal product.
 During the course of the EU-funded project PhagoBurn, Clean Cells was responsible for the GMP production of two cocktails of lytic phages, against E. coli or P. aeruginosa.
 The production strategy was based on the pre-existing regulations from the viral vaccine field. First the quality control methods and the process were validated. Then bacterial cell banks and phage stocks were produced and characterized. Finally, each phage was individually produced, controlled and used for assembling the cocktails in the GMP environment.
 The cocktails were authorized by the national authorities in 3 countries (France, Belgium, and Switzerland) and the clinical trial is in progress for safety and efficacy assessment. This experience provides a contribution for regulatory pathway evolutions in the UE.
description: Journal of Targeting Infectiuos Diseases, Vol 1, No 1 (2016)
'Factors Affecting Public Engagement with Research’: Abbreviated survey for HEI staff and students
Creators: name: Ross, Kirsty
name: Loth, Alina
name: Stewart, Mhairi
Publisher: name: figshare
Year: 2021
Subjects: classificationCode: 390303
subject: Higher education

description:
BackgroundThis survey was adapted from the larger ‘Factors Affecting Public Engagement with Research’ survey distributed by UKRI, Wellcome Trust and other in 2015. For further information about the original survey, look at the original website. You can also download a SPSS file that contains the entire dataset for the original survey. The survey attached has been written as inclusively as possible in consultation with multiple members of staff from different disciplines at the University of St Andrews.

ImplementationTo use this survey in Qualtrics, most questions are set up as either multiple choice with a single answer, matrix tables or free text boxes. There are occasional information questions that should be inserted into the survey as Text/Graphic questions. I've noted by each question suggestions for question formatting in italics but feel free to adjust to your needs. Please email me (Dr Kirsty Ross, ksrh1@st-andrews.ac.uk) if you have any questions about using this template
Microencapsulation of Clostridium difficile specific bacteriophage using glass microcapillary devices and pH dependent controlled release for colon targeted delivery
Creators: name: Vinner, Gurinder
name: Vladisavljević, Goran T
name: Clokie, Martha RJ
name: Malik, Danish Javed
Publisher: name: Journal of Targeting Infectiuos Diseases
Year: 2016

description: The  global threat to human health from antimicrobial resistance in  infection causing bacteria has led to renewed interest in the potential  of phages as therapeutic agents. In Clostridium difficile infections of the colon, targeted delivery of viable phages to the site  of infection is important. The punitive environment of the  gastrointestinal tract can potentially render free phages inactive prior  to reaching the site of infection. The actual phage load delivered at  the site of infection is typically much lower than the ingested dose.  The variability of phage load delivery may impact on the outcomes of any  phage therapy trials. This may be an important reason for some historic  failures in trials aimed at evaluating efficacy of phage therapy. Here,  we describe the encapsulation and release kinetics in vitro of a model C. difficile specific  phage, Phi9CD-KM. In the absence of encapsulation, phages were rendered  inactive within minutes upon exposure to a pH 2 solution. Release  kinetics of the encapsulated phage was studied in different pH  solutions. A burst release of phage occurred at pH 7. Slow controlled  release over several hours was observed at pH 6.
description: Journal of Targeting Infectiuos Diseases, Vol 1, No 1 (2016)
title: การศึกษาสมบัติและความคงตัวของไมโครอิมัลชันบรรจุยาไอทราโคนาโซลสำหรับทาผิวหนัง
Creators: name: ประภาพร บุญมี
Publisher: name: คณะวิทยาศาสตร์และเทคโนโลยี
publisherIdentifierScheme: ROR
Year: 2024
Subjects: ยาไอทราโคนาโซล
ไมโครอิมัลชัน
ยาต้านเชื้อรา
ความคงตัว

description: วารสารวิทยาศาสตร์ คชสาส์น, 46, 1, 1-7
'Factors Affecting Public Engagement with Research’: Abbreviated survey for HEI staff and students
Creators: name: Ross, Kirsty
Publisher: name: figshare
Year: 2021
Subjects: classificationCode: 390303
subject: Higher education

description:
Background This survey was adapted from the
larger ‘Factors Affecting Public Engagement with Research’ survey
distributed by UKRI, Wellcome Trust and other in 2015. For further information
about the original survey, look
at the original website. You can also download a SPSS
file that contains the entire dataset for the original survey. The survey
attached has been written as inclusively as possible in consultation with multiple
members of staff from different disciplines at the University of St Andrews.

Implementation

To use this survey in Qualtrics, most questions
are set up as either multiple choice with a single answer, matrix tables or
free text boxes. There are occasional information questions that should be
inserted into the survey as Text/Graphic questions. I've noted by each question
suggestions for question formatting in italics but feel free to adjust to your
needs. Please email me (Dr Kirsty Ross, ksrh1@st-andrews.ac.uk)
if you have any questions about using this template
Evaluation of Sb-1 and Pyo-bacteriophage activity to prevent Staphylococcus aureus biofilm formation by isothermal microcalorimetry
Creators: name: Tkhilaishvili, Tamta
name: Javakhadze, Malvina
name: Trampuz, Andrej
name: Di Luca, Mariagrazia
Publisher: name: Journal of Targeting Infectiuos Diseases
Year: 2016

description: Objective: Staphylococcus species are responsible for the majority of infections associated with indwelling medical devices, because of their ability to colonize biomaterial and form biofilms. Biofilm are difficult to treat with current antibiotics. Thus, the prevention of biofilm is one of the best strategies to control implant-related infection. In this study, a calorimetric assessment was performed to investigate the ability of Sb-1 and Pyo-bacteriophage to prevent the in vitro biofilm formation of methicillin-resistant Staphylococcus aureus (MRSA).
Methodology: MRSA ATCC 43300 (5x106 cfu/ml) was incubated with different titers of Sb-1 or Pyo-bacteriophage and porous glass beads for 24h at 37°C. Then, the presence of biofilm on glass beads was monitored recording real-time heat production, related to biofilm viability, for 48h by an isothermal microcalorimeter.
  Results: A significant reduction of MRSA heat production was already achieved at a lower titer (102 pfu/ml) of both Sb-1 and Pyo-phage. In the presence of 104 pfu/ml the heat production was completely abolished.

Conclusions: Sb-1 and Pyo-phage are able to prevent in vitro MRSA biofilm formation. Phages are promising for preventing device colonization and controlling biofilms on surface. Novel strategies for direct coating and release of phages from material should be further investigated.
description: Journal of Targeting Infectiuos Diseases, Vol 1, No 1 (2016)
“Micromir” phage collection: new developments
Creators: name: Zurabov, Evgeny Zhilenkov
Publisher: name: Journal of Targeting Infectiuos Diseases
Year: 2016

description: “Micromir” bacteriophage collection currently numbers over 500 therapeutically potent entities. The main criterea for bacteriophages selection are: virulence, high reproduction rate, inability to target non-pathogenic bacteria, absence of toxigens. Phage candidates are also compared by resistence kinetics by host patogens and those with the lowest metrics are selected.
 Between 2013 and 2015 Micromir scientists examined more than 1000 clinical samples, which resulted in isolating, describing and depositing 235 strains of bacteria that showed resistance to bacteriophages from the existing collection. 144 new virulent bacteriophages (from 1 to 8 against each strain) including those against Acinetobacter baumannii, Haemophilus influenzae, Staphylococcus aureus, Streptococcus agalactiae, Stenotrophomonas maltophilia and others were added to the Micromir collection and included into preparations that are currently available on the market.
 Primers to each bacteriophage are being developed, and these primers are gradually included into the production quality control procedures for the content verification.
A comparative research of cytototoxicity of Micromir phage preparations and a range of widely used antibiotics and anticeptics has been carried out. Phage cocktails have clearly demonstrated their advantages in respect to viability and proliferative potential of different human cells.
description: Journal of Targeting Infectiuos Diseases, Vol 1, No 1 (2016)
title: การใช้แป้งถั่วเหลืองเพื่อเพิ่มคุณค่าทางโภชนาการในผลิตภัณฑ์ขนมคุกกี้
Creators: name: ศักดิ์ดา จันปัญญา
Publisher: name: คณะวิทยาศาสตร์และเทคโนโลยี
publisherIdentifierScheme: ROR
Year: 2024
Subjects: แป้งถั่วเหลืองแป้งสาลี
ขนมคุกกี้

description: วารสารวิทยาศาสตร์ คชสาส์น, 46, 1, 8-12
title: คุณภาพน้ำดื่มทางกายภาพและจุลินทรีย์จากตู้กดน้ำดื่มของโรงเรียนในพื้นที่ตำบลบางทราย และวิทยาลัยการสาธารณสุขสิรินธร จังหวัดชลบุรี
Creators: name: เหลืองแก้ว โกยทรัพย์
Publisher: name: คณะวิทยาศาสตร์และเทคโนโลยี
publisherIdentifierScheme: ROR
Year: 2024
Subjects: คุณภาพน้ำดื่ม
ตู้กดน้ำดื่มในโรงเรียน
Total coliform
Fecal coliform
Escherichia coli

description: วารสารวิทยาศาสตร์ คชสาส์น, 46, 1, 13-19
title: โพรโทซัวดินในพื้นที่ป่า มหาวิทยาลัยเทคโนโลยีราชมงคลอีสาน วิทยาเขตสุรินทร์
Creators: name: ขัตติยา มูลไชยสุข
Publisher: name: คณะวิทยาศาสตร์และเทคโนโลยี
publisherIdentifierScheme: ROR
Year: 2024
Subjects: โพรโทซัวดิน
ระบบนิเวศป่า
ความหลากหลาย
ป่า
สำรวจ

description: วารสารวิทยาศาสตร์ คชสาส์น, 46, 1, 20-26
Real-time assessment of Sb-1 and Pyo-bacteriophage activity against methicillin-resistant Staphylococcus aureus mature biofilm
Creators: name: Tkhilaishvili, Tamta
name: Di Luca, Mariagrazia
name: Javakhadze, Malvina
name: Trampuz, Andrej
Publisher: name: Journal of Targeting Infectiuos Diseases
Year: 2016

description: Objectives: Bacteria in biofilms exhibit increased phenotypic resistance to most antimicrobial agents. Bacteriophages are considered a promising alternative to conventional antibiotics in treating biofilm-related infections due to their mechanism of action and rapid bactericidal activity, including against multi-drug resistant bacteria. In this study, we investigated the activity of Sb-1 and Pyo-bacteriophage cocktail against methicillin-resistant S. aureus (MRSA).
Methodology: MRSA biofilm (strain ATCC 43300) was grown on porous glass beads and real-time monitored by isothermal microcalorimetry.
Results:Both tested bacteriophages rapidly inhibited the heat production related to viability of MRSA biofilm in a concentration-dependent manner during the first 24 h. MRSA biofilm was immediately eradicate only by co-incubation with the highest Sb-1 phage titer (107). After 24 h-exposition all the titer of bacteriophages shown a strong reduction of biofilm viability. Complete eradication has been achieved after 7 day of incubation with highest phage titer.
 Conclusion: Sb-1 and Pyo-bacteriophage are promising phages for treatment of biofilms. Their potential activity combined with antibiotics should be explored.
description: Journal of Targeting Infectiuos Diseases, Vol 1, No 1 (2016)
title: ฤทธิ์ต้านอนุมูลอิสระและฤทธิ์ต้านแบคทีเรียก่อสิว (Cut bacterium acnes) ของน้ำมันหอมระเหยที่สกัดจากเมล็ดและกลีบดอกดาวเรือง (Tagetes erecta L.)
Creators: name: สาธิต เอี่ยมจงจันทร์
Publisher: name: คณะวิทยาศาสตร์และเทคโนโลยี
publisherIdentifierScheme: ROR
Year: 2024
Subjects: ดอกดาวเรือง
น้ำมันหอมระเหย
สารต้านอนุมูลอิสระ
ฤทธิ์ต้านเชื้อแบคทีเรีย

description: วารสารวิทยาศาสตร์ คชสาส์น, 46, 1, 27-33