cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Atta penetrans
Creators: name: Smith, F.
Publisher: name: Zenodo
Year: 1857
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Formicidae
Atta
Atta penetrans

description: 1. Atta penetrans.
A. capite thoraceque nigris; abdomine obscure rufo-piceo; alis subhyalinis; capite thoraceque longitudinaliter striatis.
Female. Length 4 lines. Black and shining; head longitudinally finely striated; the mouth, clypeus and antennae, ferruginous. Thorax: elongate-ovate, the prothorax anteriorly and the legs, ferruginous; the thorax above with oblong punctures which run into striae; an impunctate line in the middle of the mesothorax anteriorly; the metathorax truncated, the truncation smooth and shining; wings subhyaline, with a fuscous line along the costal nervure; the apical margins of the wing with a fringe of very fine white hairs. Abdomen: elongate-ovate, dark rufo-piceous, the apical margins of the segments brighter; the nodes of the peduncle globose and punctured.
Hab. Borneo (Sarawak).
description: Published as part of Smith, F., 1857, Catalogue of the hymenopterous insects collected at Sarawak, Borneo; Mount Ophir, Malacca; and at Singapore, by A. R. Wallace., pp. 42-88 in Journal of the Proceedings of the Linnean Society of London, Zoology 2 on page 77
Towards the second year milestone: the UQLab development roadmap
Creators: name: Marelli, Stefano
name: Sudret, Bruno
Publisher: name: ETH Zurich
Year: 2017
Subjects: UQLab
Uncertainty Quantification
Software

description: Uncertainty quantification is rapidly becoming a well-established topic in many fields of engineering and applied sciences. However, the lack of proper software tools that combine generality, accessibility, ease of use and state-of-the-art techniques has somewhat hindered the diffusion of many powerful tools to a wider scientific audience. Under these premises, the UQLab software project started in ETH Zurich in early 2013 with the aim of providing a powerful, modular, robust and user-friendly platform for uncertainty quantification across disciplines. Following the 3-step general framework for uncertainty quantification described in Sudret (2007), UQLab is designed to help researchers to solve a large class of uncertainty quantification problems by providing a natural environment to pose them, as well as advanced algorithms for their solution (Marelli and Sudret, 2014). The first beta version of UQLab was released in July 2015. Among its features, it included the joint probabilistic representation of random variables based on the copula formalism, a module to connect to various kinds of existing computational models (e.g. Matlab functions or external software through wrappers), advanced metamodelling techniques (e.g. sparse polynomial chaos expansions and Gaussian process regression), state-of-the-art sensitivity analysis tools (e.g. Sobol’ indices, Morris elementary effects, etc.) and a Reliability analysis module (e.g. FORM/SORM, Importance Sampling, adaptive surrogate-based AK-MCS, etc.). Close to the two years milestone and after the open source release of the code of its scientific modules, a number of open topics and development perspectives are presented in this contribution. Among them: the extension of the available metamodelling tool to comprise low rank canonical representations, PC-Kriging, support vector regression and classification, as well as the extension of the probabilistic input representation with random fields, high dimensional copula inference, etc. The planned launch of a global UQLab community to further foster the interdisciplinary character of its development will be also discussed. References [1] Sudret, B. (2007). Uncertainty propagation and sensitivity analysis in mechanical models - Contributions to structural reliability and stochastic spectral methods. Habilitation à diriger des recherches, Université Blaise Pascal, Clermont-Ferrand, France. [2] Marelli, S. & Sudret (2014), B. UQLab: A framework for uncertainty quantification in Matlab. Proc. 2nd Int. Conf. on Vulnerability, Risk Analysis and Management (ICVRAM2014), Liverpool, United Kingdom, 2554-2563.
Atta cingulata
Creators: name: Smith, F.
Publisher: name: Zenodo
Year: 1857
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Formicidae
Atta
Atta cingulata

description: 2. Atta cingulata.
A. ferruginea; pedibus abdomineque pallide ferrugineis; capite maximo, thorace triplo latiore.
Worker major. Length 1 3/4 line. Head very large, ferruginous, the antennae paler; eyes very small, placed at the sides of the head a little before the middle. Thorax: pale ferruginous, very convex or globose anteriorly, much narrower behind, with two short acute spines on the metathorax; legs pale rufo-testaceous. Abdomen: ovate, with the base truncated, with a fuscous ring in the middle; the nodes of the peduncle globose.
Worker minor. About 1 line in length. The head much smaller and more elongate; in colour, resembling the larger worker, and equally smooth and shining; the abdomen with a fuscous ring in the middle.
Hab. Borneo (Sarawak).
description: Published as part of Smith, F., 1857, Catalogue of the hymenopterous insects collected at Sarawak, Borneo; Mount Ophir, Malacca; and at Singapore, by A. R. Wallace., pp. 42-88 in Journal of the Proceedings of the Linnean Society of London, Zoology 2 on page 77
Additional file 1: of Factors associated with maternal near miss in childbirth and the postpartum period: findings from the birth in Brazil National Survey, 2011â  2012
Creators: name: Domingues, Rosa
name: Dias, Marcos
name: Schilithz, Arthur
name: Leal, Maria
Publisher: name: Figshare
Year: 2016
Subjects: subject: Cell Biology
subject: Biotechnology
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Translated article. (DOCX 113Â kb)
Additional file 2: of Factors associated with maternal near miss in childbirth and the postpartum period: findings from the birth in Brazil National Survey, 2011â  2012
Creators: name: Domingues, Rosa
name: Dias, Marcos
name: Schilithz, Arthur
name: Leal, Maria
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Cell Biology
subject: Biotechnology
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases
subject: Computational Biology

description: Reviewer reports. (PDF 251Â kb)
MOESM7 of The Southwestern fringe of Europe as an important reservoir of caprine biodiversity
Creators: name: Martínez, Amparo
name: Gama, Luis
name: Delgado, Juan
name: Cañón, Javier
name: Amills, Marcel
name: Sousa, Carolina
name: Ginja, Catarina
name: Zaragoza, Pilar
name: Manunza, Arianna
name: Landi, Vincenzo
name: Sevane, Natalia
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: Plant Biology

description: Additional file 7: Figure S3. UPGMA clustering of the ultra-metric distance matrix obtained from the conversion of the average genotype membership coefficients (Q) in each cluster (K = 3) into genetic distances.
AI-Driven Diagnostic Tools: A Survey of Adoption and Outcomes in Global Healthcare Practices
Creators: name: SAYEM, MD
Publisher: name: figshare
Year: 2025
Subjects: classificationCode: 460299
subject: Artificial intelligence not elsewhere classified
classificationCode: 429999
subject: Other health sciences not elsewhere classified

description: The roles of artificial intelligence in health care, especially in diagnosis, are evident as they function as a multiplier in diagnosing patients. This research explored how healthcare organizations incorporate decision support tools based on artificial intelligence technology, the problems healthcare professionals encounter during the integration process, and the results obtained from applying artificial intelligence technology at the system level. It therefore sought to identify the differences in the identified factors across regions and types of facilities. A quantitative survey with questions in a closed format was used; the participants were 260 healthcare professionals from different hospitals and clinics, doctors, healthcare managers and IT specialists. The findings showed that the more resources and specialist human labor are accessible, the more public and private hospitals have embraced AI. Compared to the smaller clinics, research institutions expressed considerable difficulties, especially in costs and training opportunities. Hence, the map reveals that North America and Europe have a higher overall rate of Broadband absorption than Africa and South America, where financial and infrastructural constraints are even higher. This study reveals that, though the application of AI in diagnosing amplified the diagnosis rate and benefitted distinct treatment plans, there are barriers, including prohibitive costs, regulation norms, and the requirement of training. The research showed that the greater the level of AI implementation, the higher the satisfaction among the healthcare organization staff; therefore, the approach should be adjusted depending on the healthcare facility setting. The study's findings suggest that approaches must be adjusted depending on the region and type of facility in mind. It also emphasizes the need to spend sums on training and investing in structures so that the global advantages of integrating Artificial Intelligence into diagnostic tools can be achieved, especially in developing countries. Future studies should identify ways of making AI more affordable in the health sector and conduct more extended research on the efficiency of AI in healthcare.
MOESM2 of The Southwestern fringe of Europe as an important reservoir of caprine biodiversity
Creators: name: Martínez, Amparo
name: Gama, Luis
name: Delgado, Juan
name: Cañón, Javier
name: Amills, Marcel
name: Sousa, Carolina
name: Ginja, Catarina
name: Zaragoza, Pilar
name: Manunza, Arianna
name: Landi, Vincenzo
name: Sevane, Natalia
Publisher: name: Figshare
Year: 2015
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Plant Biology

description: Additional file 2: Table S2. Descriptive statistics of the genetic diversity of the 20 microsatellite markers used to genotype the 29 goat populations. This file contains data on the microsatellites analyzed i.e. total number of alleles (NA); expected heterozygosity (He); observed heterozygosity (Ho); Wright’s F- statistics and number of breeds showing deviations from Hardy–Weinberg equilibrium (HWEd) (P
MOESM4 of The Southwestern fringe of Europe as an important reservoir of caprine biodiversity
Creators: name: Martínez, Amparo
name: Gama, Luis
name: Delgado, Juan
name: Cañón, Javier
name: Amills, Marcel
name: Sousa, Carolina
name: Ginja, Catarina
name: Zaragoza, Pilar
name: Manunza, Arianna
name: Landi, Vincenzo
name: Sevane, Natalia
Publisher: name: Figshare
Year: 2015
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Plant Biology

description: Additional file 4: Figure S2. Estimated posterior probabilities of the data for different values of K in the analysis with STRUCTURE. This file contains the plots of the average likelihood of data (ln Pr(X|K)) (mean ± standard deviation of five independent runs) obtained with STRUCTURE for 29 goat breeds from Portugal and Spain for two to 35 inferred genetic clusters (K).
Physatta Smith
Creators: name: Smith, F.
Publisher: name: Zenodo
Year: 1857
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Formicidae
Physatta

description: Gen. Physatta.
Head small; eyes of moderate size, placed a little before the middle; ocelli in a triangle on the vertex; mandibles stout and denticulate at the apex; antennae short, not so long as the head and thorax; the scape nearly as long as the flagellum, slightly thickened at the apex; flagellum subclavate, 6-jointed, the first joint shorter than the second; the third, fourth and fifth about the same length as the first, the apical joint the length of the two basal ones. Maxillary palpi 3-jointed, the basal and apical joints of about equal length, the intermediate joint twice the length of the apical joint, the latter obliquely truncate at the apex. Labial palpi 3-jointed, the two basal joints clavate, the apical one fusiform. Thorax subglobose; anterior wings with one marginal and two submarginal cells, the first submarginal cell about the length of the stigma, the second extending to the apex of the wing; with one sub-triangular discoidal cell; the tibia armed with a single spur at the apex. Abdomen globose, pedunculated, the peduncle formed of two nodes.
This genus in one of its most prominent characters agrees with the genus Heptacondylus, both having seven-jointed antennae: their relative proportions are, however, very different, as well as that of the joints of the flagellum; the wings have also a different neuration; this latter character will, I am inclined to believe, prove eventually that by which the generic divisions of the Hymenoptera must be regulated; even at present, with our meagre and imperfect knowledge of the species, it does, if strictly adhered to, bring together assemblages of species, allied alike in habit and structure; when taken in connexion with the structure of the mandibles and legs, indicative of habit, it becomes perhaps the most safe and available character hitherto adopted for their generic subdivision; the greatest help to science 1 think is its simplification.
description: Published as part of Smith, F., 1857, Catalogue of the hymenopterous insects collected at Sarawak, Borneo; Mount Ophir, Malacca; and at Singapore, by A. R. Wallace., pp. 42-88 in Journal of the Proceedings of the Linnean Society of London, Zoology 2 on pages 77-78
MOESM3 of The Southwestern fringe of Europe as an important reservoir of caprine biodiversity
Creators: name: Martínez, Amparo
name: Gama, Luis
name: Delgado, Juan
name: Cañón, Javier
name: Amills, Marcel
name: Sousa, Carolina
name: Ginja, Catarina
name: Zaragoza, Pilar
name: Manunza, Arianna
name: Landi, Vincenzo
name: Sevane, Natalia
Publisher: name: Figshare
Year: 2015
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified

description: Additional file 3: Figure S1. Correlation between F ST genetic distances and geographic distances (P > 0.0001 after 10,000 permutations). (a) 29 goat breeds. (b) Portuguese and Spanish breeds after removing the Canary Islands populations.
ADENOMIYOZDA EMBRIOTROP AUTOANTITELARNING AHAMIYATI
Creators: name: Askarova, Zebo
name: Rakhimova, Amira
Publisher: name: Zenodo
Year: 2024

description: Bizning tadqiqotimizda adenomiyi bo'lgan perimenopauzal yoshdagi ayollarda tananing immunoreaktivligini baholash uchun, ELIP testi yordamida qon zardobida embriotrop antitanalar aniqlandi. Immunoreaktivlikning aniqlangan siljishlari endometriozning yangi paydo bo'lgan o'choqlarini amalga oshirishda boshlang'ich mexanizmlarining tayyorligidan dalolat beradi. Ehtimol, ichki endometriozning (adenomiyoz) takrorlanishining oldini olish muammolarini hal qilish reaktivlikni hisobga olgan holda immunitet tizimining holatini to'g'irlashda, shuningdek, ayol tanasida u vositachilik qilgan endokrin-metabolik moslashuv-gomeostatik reaksiyalarda yotadi.
MOESM6 of The Southwestern fringe of Europe as an important reservoir of caprine biodiversity
Creators: name: Martínez, Amparo
name: Gama, Luis
name: Delgado, Juan
name: Cañón, Javier
name: Amills, Marcel
name: Sousa, Carolina
name: Ginja, Catarina
name: Zaragoza, Pilar
name: Manunza, Arianna
name: Landi, Vincenzo
name: Sevane, Natalia
Publisher: name: Figshare
Year: 2015
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Pharmacology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Computational Biology

description: Additional file 6: Table S4. Proportional contribution of the clusters inferred with STRUCTURE (K = 24) to the gene pool of the 29 Portuguese and Spanish goat populations. Contributions of the most important clusters per population are represented in bold. Genetic clusters with a contribution of less than 10 % in any of the 29 goat populations are shown in grey.
MOESM5 of The Southwestern fringe of Europe as an important reservoir of caprine biodiversity
Creators: name: Martínez, Amparo
name: Gama, Luis
name: Delgado, Juan
name: Cañón, Javier
name: Amills, Marcel
name: Sousa, Carolina
name: Ginja, Catarina
name: Zaragoza, Pilar
name: Manunza, Arianna
name: Landi, Vincenzo
name: Sevane, Natalia
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Plant Biology
subject: Computational Biology

description: Additional file 5: Table S3. Proportional contribution of the clusters inferred with STRUCTURE (K = 12) to the gene pools, ancestry diversity and expected heterozygosities of 29 Portuguese and Spanish goat breeds.
Additional file 3: of The effect of the 2-week wait referral system on the detection of and mortality from colorectal cancer: protocol of a systematic review and meta-analysis
Creators: name: Mozdiak, Ella
name: Tsertsvadze, Alexander
name: McFarlane, Michael
name: Widlak, Monika
name: Tabuso, Maria
name: Dunlop, Amber
name: Arasaradnam, Ramesh
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Medicine
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Science Policy

description: Search strategies for PubMed MEDLINE. (PDF 806 kb)
Physatta dromedarius Smith
Creators: name: Smith, F.
Publisher: name: Zenodo
Year: 1857
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Formicidae
Physatta
Physatta dromedarius

description: 1. Physatta dromedarius.
P. capite thoraceque ferrugineis; alis abdomineque nigris.
Female. Length 6 1/2 lines. The head, thorax, legs and petiole of the abdomen ferruginous; the mandibles with four or five black teeth; the head and thorax longitudinally striated and clothed, as well as the legs, with erect thin fulvous pubescence; the intermediate and posterior legs dark rufo-piecous; wings dark fuscous, slightly iridescent; the metathorax armed with two short stout spines at its base, the truncated portion transversely striated. Abdomen black, covered with a short erect fuscous pubescence; the nodes of the petiole subglobose, the first attached to the thorax by a short stout petiole.
Hab. Borneo (Sarawak).
description: Published as part of Smith, F., 1857, Catalogue of the hymenopterous insects collected at Sarawak, Borneo; Mount Ophir, Malacca; and at Singapore, by A. R. Wallace., pp. 42-88 in Journal of the Proceedings of the Linnean Society of London, Zoology 2 on page 78
Typhlatta Smith 1857
Creators: name: Smith, F.
Publisher: name: Zenodo
Year: 1857
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Formicidae
Typhlatta

description: Gen. Typhlatta.
Mandibles triangular; eyes obsolete; flagellum 9-jointed; petiole of the abdomen formed of 2 nodes.
The above characters are those of the worker of the species; probably an examination of the other sexes would present other very distinctive generic characters, particularly in the neuration of the wings: the palpi I have not examined.
description: Published as part of Smith, F., 1857, Catalogue of the hymenopterous insects collected at Sarawak, Borneo; Mount Ophir, Malacca; and at Singapore, by A. R. Wallace., pp. 42-88 in Journal of the Proceedings of the Linnean Society of London, Zoology 2 on page 79
USED IN LESSON PROCESSES EFFECTIVENESS OF INTERACTIVE METHODS
Creators: name: Kurbanbaeva Dilaram Mukhamovna
Publisher: name: Zenodo
Year: 2024

description: Annotation: In this article, the opinions about the improvement of the quality and effectiveness of the interactive methods in the lesson processes organized in the educational institutions and the skills required of the teacher to interest the student in the lesson are described.

 Key words: education, quality of education, interactive methods, activity, assignment, pedagogue, technology, mastering.
Additional file 4: Table S1. of The effect of the 2-week wait referral system on the detection of and mortality from colorectal cancer: protocol of a systematic review and meta-analysis
Creators: name: Mozdiak, Ella
name: Tsertsvadze, Alexander
name: McFarlane, Michael
name: Widlak, Monika
name: Tabuso, Maria
name: Dunlop, Amber
name: Arasaradnam, Ramesh
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Medicine
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Data extraction sheet sample. (PDF 998 kb)
Typhlatta laeviceps Smith 1857
Creators: name: Smith, F.
Publisher: name: Zenodo
Year: 1857
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Formicidae
Typhlatta
Typhlatta laeviceps

description: 1. Typhlatta laeviceps.
T. niger, nitidus; capite, thorace antice et abdomine glaberrimis; antennis tarsisque rufo-piceis.
Worker. Length 2 lines. Black; the head glassy-smooth and shining; ovate, with the posterior margin of the vertex truncate; in some examples, an indistinct castaneous spot at the sides of the head, in the usual situation of the eyes; the antennae ferruginous. Thorax elongate, compressed at the sides; very smooth and shining anteriorly, with a delicate striation in the middle, the metathorax being finely rugulose; the tarsi rufo-piceous. Abdomen: ovate, very smooth and shining; the nodes subglobose, the basal one being the smallest.
Hab. Borneo (Sarawak).
description: Published as part of Smith, F., 1857, Catalogue of the hymenopterous insects collected at Sarawak, Borneo; Mount Ophir, Malacca; and at Singapore, by A. R. Wallace., pp. 42-88 in Journal of the Proceedings of the Linnean Society of London, Zoology 2 on page 79
Additional file 5: of The effect of the 2-week wait referral system on the detection of and mortality from colorectal cancer: protocol of a systematic review and meta-analysis
Creators: name: Mozdiak, Ella
name: Tsertsvadze, Alexander
name: McFarlane, Michael
name: Widlak, Monika
name: Tabuso, Maria
name: Dunlop, Amber
name: Arasaradnam, Ramesh
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Medicine
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Science Policy

description: Risk of bias assessment of included studies. Table S2. Risk of bias in cohort studies [16 items]. Table S3. Risk of bias in case-control studies [13 items]. (PDF 1105 kb)
Additional file 1: of The effect of the 2-week wait referral system on the detection of and mortality from colorectal cancer: protocol of a systematic review and meta-analysis
Creators: name: Mozdiak, Ella
name: Tsertsvadze, Alexander
name: McFarlane, Michael
name: Widlak, Monika
name: Tabuso, Maria
name: Dunlop, Amber
name: Arasaradnam, Ramesh
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: NICE primary care referral guidelines for suspected cancer. (PDF 339 kb)
Additional file 2: Figure S2. of A transcriptional blueprint for a spiral-cleaving embryo
Creators: name: Hsien-Chao Chou
name: Pruitt, Margaret
name: Bastin, Benjamin
name: Schneider, Stephan
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Conservation of early Platynereis gene models in various metazoan species. Our early Platynereis transcriptome comprises of 21,870 gene models with ORFs >100 amino acids that are supported by the Swiss-Prot database, the OrthoMCL analysis, or the EMBL draft 1.90. To further understand the gene/protein evolution of these Platynereis gene models, we constructed orthologous groups among 18 selected species (see OrthoMCL analysis in Methods for details), and determined the number of shared genes between Platynereis and specific groups of species based on two stringent criteria: 1) shared genes must represent the best reciprocal blast hits between each species, and 2) the ORFs must share 50Â % identity on the protein level. This figure shows Venn diagrams of the number of genes shared by the three selected species (orange), the number of genes shared between Platynereis and one of the species (yellow and crimson), and the number of genes in Platynereis only (blue). Each of the seven sets shown here contains Platynereis and two different species of similar phylogenetic distance. The 7 sets include: (A) Platynereis dumerilii, and two annelids, the leech Helobdella robusta and the bristle worm Capitella teleta. (B) Platynereis dumerilii, and two spiralian mollusks, the limpet Lottia gigantea and the pacific oyster Crassostrea gigas. (C) Platynereis dumerilii, and two ecdysozoans, the crustacean water flea Daphnia pulex and the insect fruit fly Drosophila melanogaster. (D) Platynereis dumerilii, and two invertebrate deuterostomes, the hemichordate Saccoglossus kowalevskii and the cephalochordate lancelet Branchiostoma floridae. (E) Platynereis dumerilii, and two deuterostome ambulacrarians, the acorn worm Saccoglossus kowalevskii and the echinoderm sea urchin Strongylocentrotus purpuratus. (F) Platynereis dumerilii, and two deuterostome vertebrates, the teleost zebrafish Danio rerio and the mammal human Homo sapiens. (G) Platynereis dumerilii, and two metazoans, the cnidarian sea anemone Nematostella vectensis and the chordate human Homo sapiens. (PDF 102Â kb)
Echinopla
Creators: name: Smith, F.
Publisher: name: Zenodo
Year: 1857
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Formicidae
Echinopla

description: Gen. Echinopla.
Head transverse; eyes small, placed laterally, high on the head; antennae 12-jointed, inserted forwards on the head, wide apart; the labial palpi 4-jointed, the three basal ones of about equal length, clavate; the apical joint as long as the two preceding joints united; the maxillary palpi 5-jointed, elongate, the three apical joints long and slender, the two basal ones much shorter and stouter; mandibles short, stout, and of equal width throughout, armed with five stout teeth. Thorax oblong-quadrate; legs of moderate length; tarsi 5-jointed; each tibia armed with a single spine at the apex. Abdomen globose; peduncle formed of a single node; the first segment very large, concealing the other segments beneath it.
description: Published as part of Smith, F., 1857, Catalogue of the hymenopterous insects collected at Sarawak, Borneo; Mount Ophir, Malacca; and at Singapore, by A. R. Wallace., pp. 42-88 in Journal of the Proceedings of the Linnean Society of London, Zoology 2 on page 79
Additional file 1: Figure S1. of A transcriptional blueprint for a spiral-cleaving embryo
Creators: name: Hsien-Chao Chou
name: Pruitt, Margaret
name: Bastin, Benjamin
name: Schneider, Stephan
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Assessment of the Platynereis transcriptome assembly. To evaluate the completeness of our assembly, our gene models were compared with eukaryotic, metazoan, and arthropod universal single-copy orthologs using BUSCO. For the eukaryotic subset, the majority of eukaryote orthologs, 85 %, were completely assembled (blue), 6 % were partially assembled (crimson), and 8 % could not be identified in our assembly (green). The subsets of metazoan and arthropod orthologs have 88 and 73 % completeness, respectively. (PDF 30 kb)
Additional file 9: Figure S4. of A transcriptional blueprint for a spiral-cleaving embryo
Creators: name: Hsien-Chao Chou
name: Pruitt, Margaret
name: Bastin, Benjamin
name: Schneider, Stephan
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Plant Biology

description: Gene Ontology enrichment analysis at each stage. The top 5000 expressed genes at each stage were selected and their associated GO terms were shown by their namespaces: (A) Biological process, (B) Cellular component, and (C) Molecular function. (D) All stages show similar GO term enrichment patterns (correlation coefficientâ  >â  0.8). Similar to the KEGG pathways analysis, the 2hpf GO terms are less similar to the other six stages. (PDF 632Â kb)
Additional file 8: Figure S3. of A transcriptional blueprint for a spiral-cleaving embryo
Creators: name: Hsien-Chao Chou
name: Pruitt, Margaret
name: Bastin, Benjamin
name: Schneider, Stephan
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: KEGG enrichment analysis at each stage. The number of KEGG pathways associated with the top 5000 expressed genes at each stage was counted. Hierarchy clustering was used to classify these pathways and three distinct groups were observed: (A) High frequency (> 26), (B) Medium frequency (24 ~ 26), and (C) Low frequency (< 24). (D) All stages shared similar associated KEGG pathways (correlation coefficient >0.85). Adjacent stages have higher correlation with the exception of 2hpf, which is not similar to any other stage. (PDF 661 kb)
Additional file 5: of Assessing the quality of anti-malarial drugs from Gabonese pharmacies using the MiniLabÂŽ: a field study
Creators: name: Visser, Benjamin
name: Meerveld-Gerrits, Janneke
name: DaniĂŤlle Kroon
name: Mougoula, Judith
name: Vingerling, Rieke
name: Bache, Emmanuel
name: Boersma, Jimmy
name: MichĂ¨Le Van Vugt
name: Selidji Agnandji
name: Harparkash Kaur
name: Grobusch, Martin
Publisher: name: Figshare
Year: 2015
Subjects: subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Science Policy

description: Results of the disintegration test. This documents shows the detailed results of the disintegration tests.
Additional file 1: of Assessing the quality of anti-malarial drugs from Gabonese pharmacies using the MiniLabÂŽ: a field study
Creators: name: Visser, Benjamin
name: Meerveld-Gerrits, Janneke
name: DaniĂŤlle Kroon
name: Mougoula, Judith
name: Vingerling, Rieke
name: Bache, Emmanuel
name: Boersma, Jimmy
name: MichĂ¨Le Van Vugt
name: Selidji Agnandji
name: Harparkash Kaur
name: Grobusch, Martin
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: The medicine regulatory system in Gabon. This paragraph describes in brief the medicine regulatory system in Gabon.
Additional file 3: of Assessing the quality of anti-malarial drugs from Gabonese pharmacies using the MiniLab®: a field study
Creators: name: Visser, Benjamin
name: Meerveld-Gerrits, Janneke
name: Kroon, Daniëlle
name: Mougoula, Judith
name: Vingerling, Rieke
name: Bache, Emmanuel
name: Boersma, Jimmy
name: Vugt, Michèle Van
name: Selidji Agnandji
name: Harparkash Kaur
name: Grobusch, Martin
Publisher: name: Figshare
Year: 2015
Subjects: subject: Physiology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: CERMEL Scientific Review Committee’s study protocol assessment. The assessment of the Scientific Review Committee of the study protocol.
Additional file 6: of Assessing the quality of anti-malarial drugs from Gabonese pharmacies using the MiniLabÂŽ: a field study
Creators: name: Visser, Benjamin
name: Meerveld-Gerrits, Janneke
name: DaniĂŤlle Kroon
name: Mougoula, Judith
name: Vingerling, Rieke
name: Bache, Emmanuel
name: Boersma, Jimmy
name: MichĂ¨Le Van Vugt
name: Selidji Agnandji
name: Harparkash Kaur
name: Grobusch, Martin
Publisher: name: Figshare
Year: 2015
Subjects: subject: Pharmacology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Science Policy

description: AMQUAL questionnaire results. This documents summarizes the results of the street survey conducted.
Additional file 4: of Assessing the quality of anti-malarial drugs from Gabonese pharmacies using the MiniLabÂŽ: a field study
Creators: name: Visser, Benjamin
name: Meerveld-Gerrits, Janneke
name: DaniĂŤlle Kroon
name: Mougoula, Judith
name: Vingerling, Rieke
name: Bache, Emmanuel
name: Boersma, Jimmy
name: MichĂ¨Le Van Vugt
name: Selidji Agnandji
name: Harparkash Kaur
name: Grobusch, Martin
Publisher: name: Figshare
Year: 2015
Subjects: subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Sample collection. The case record form or sample collection form depicts all the information collected during the sampling process.
Additional file 2: of Assessing the quality of anti-malarial drugs from Gabonese pharmacies using the MiniLabÂŽ: a field study
Creators: name: Visser, Benjamin
name: Meerveld-Gerrits, Janneke
name: DaniĂŤlle Kroon
name: Mougoula, Judith
name: Vingerling, Rieke
name: Bache, Emmanuel
name: Boersma, Jimmy
name: MichĂ¨Le Van Vugt
name: Selidji Agnandji
name: Harparkash Kaur
name: Grobusch, Martin
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Pharmacology
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Study costs. To increase transparency and reproducibility, the costs of this field survey are published. These include for example the laboratory costs, collection of the samples and travel expenses.
MOESM1 of Remote triggering of seismicity at Japanese volcanoes following the 2016 M7.3 Kumamoto earthquake
Creators: name: Enescu, Bogdan
name: Shimojo, Kengo
name: Opris, Anca
name: Yagi, Yuji
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Space Science
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Computational Biology

description: Additional file 1. Additional figures.
Additional file 1: of “Back to the future”: Influence of beliefs regarding the future on TTO answers
Creators: name: F. Van Nooten
name: N.J.A. Van Exel
name: D. Eriksson
name: W.B.F. Brouwer
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Health states used in the TTO exercise, in addition to ‘own current health status’ and ‘dead’. (DOCX 27 kb)
Additional file 2: of â  Back to the futureâ  : Influence of beliefs regarding the future on TTO answers
Creators: name: F. Van Nooten
name: N.J.A. Van Exel
name: D. Eriksson
name: W.B.F. Brouwer
Publisher: name: Figshare
Year: 2016
Subjects: subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Inorganic Chemistry
subject: Science Policy

description: Flow of TTO question. (DOCX 31 kb)
Additional file 1: of Taxonomer: an interactive metagenomics analysis portal for universal pathogen detection and host mRNA expression profiling
Creators: name: Flygare, Steven
name: Simmon, Keith
name: Miller, Chase
name: Qiao, Yi
name: Kennedy, Brett
name: Sera, Tonya Di
name: Graf, Erin
name: Tardif, Keith
name: AurĂŠlie Kapusta
name: Rynearson, Shawn
name: Stockmann, Chris
name: Queen, Krista
name: Suxiang Tong
name: Voelkerding, Karl
name: Blaschke, Anne
name: Byington, Carrie
name: Jain, Seema
name: Pavia, Andrew
name: Krow Ampofo
name: Eilbeck, Karen
name: Gabor Marth
name: Yandell, Mark
name: Schlaberg, Robert
Publisher: name: Figshare
Year: 2016
Subjects: subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Marine Biology
subject: 60506 Virology

description: Supplementary results. (DOCX 12212 kb)
Echinopla melanarctos
Creators: name: Smith, F.
Publisher: name: Zenodo
Year: 1857
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Formicidae
Echinopla
Echinopla melanarctos

description: 1. Echinopla melanarctos.
E. nigra, hispida; oculis extantibus; abdominis squama in utroque latere spina longa acuta horizontali; abdomine globoso.
Worker. Length 3 lines. Black; the head, thorax and abdomen, covered with short blunt spines, or pedestals, each having a long hair at its summit; the palpi pale testaceous; the antennae inserted under thin elevated curved plates on the anterior part of the face, the face with a rugose striation; the head smooth beneath, shining and concave; the eyes very prominent and globose. Thorax rugose; the legs slightly pubescent, the calcaria pale testaceous. (Fig. and details, Plate I.)
Hab. Singapore.
description: Published as part of Smith, F., 1857, Catalogue of the hymenopterous insects collected at Sarawak, Borneo; Mount Ophir, Malacca; and at Singapore, by A. R. Wallace., pp. 42-88 in Journal of the Proceedings of the Linnean Society of London, Zoology 2 on page 79
Echinopla pallipes
Creators: name: Smith, F.
Publisher: name: Zenodo
Year: 1857
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Formicidae
Echinopla
Echinopla pallipes

description: 2. Echinopla pallipes.
E. nigra, hispida; oculis protninentibus; abdomine globoso; squama in utroqne latere spina horizontali; pedibus pallide testaceis.
Worker. Length 21/2 lines. Black, rugose; the abdomen vermiculate, interpersed with slight elevations placed in great regularity over the entire upper surface, each elevation terminating in a hair; the scape and the mandibles ferruginous; the eyes very prominent; the palpi and legs pale testaceous, with the tarsi rufo-piceous; the peduncle transverse, produced on each side into a short horizontal spine; the abdomen rufo-piceous.
Hab. Borneo (Sarawak).
It is very difficult to describe the sculpturing of this insect; on the head it is strongest; the species strongly resembles E. melanarctos, but the elevations are shorter, as well as the hairs at their apex.
description: Published as part of Smith, F., 1857, Catalogue of the hymenopterous insects collected at Sarawak, Borneo; Mount Ophir, Malacca; and at Singapore, by A. R. Wallace., pp. 42-88 in Journal of the Proceedings of the Linnean Society of London, Zoology 2 on page 80
Additional file 2: of Ketamine for depression relapse prevention following electroconvulsive therapy: protocol for a randomised pilot trial (the KEEP-WELL trial)
Creators: name: Finnegan, Martha
name: Ryan, Karen
name: Shanahan, Enda
name: Harkin, Andrew
name: Daly, Leslie
name: McLoughlin, Declan
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Details of biological studies. (DOCX 25Â kb)
Echinopla
Creators: name: Smith, F.
Publisher: name: Zenodo
Year: 1857
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Formicidae
Echinopla

description: 3. Echinopla Striata.
E. nigra; capite, thorace et abdomine longitudinaliter striatis; thorace oblongo, subquadrate; pedunculo transverso.
Worker. Length 3 lines. Black; the head, thorax and abdomen finely striated longitudinally; the head with an obscure blue tinge; the palpi pale rufo-testaceous. Thorax: oblong, the margins denticulate, the anterior margin rounded, the lateral margins narrowed to the middle, and again widened posteriorly; above slightly arched; the division of the pro- and meso-thorax distinctly marked by a suture; that of the meso- and meta-thorax by a deep strangulation; the peduncle of the abdomen incrassate, transverse, and armed on each side by a stout spine. The entire insect thinly, sprinkled with erect black hairs.
Hab. Malacca.
Of this species I have only seen two individuals: I place it in this genus with some hesitation; but the antennae are similar; the thorax and scale of the abdomen of the same form; the legs also are short, as in Echinopla: the principal difference being, that the eyes are less prominent; it is altogether a very curious and remarkable species.
description: Published as part of Smith, F., 1857, Catalogue of the hymenopterous insects collected at Sarawak, Borneo; Mount Ophir, Malacca; and at Singapore, by A. R. Wallace., pp. 42-88 in Journal of the Proceedings of the Linnean Society of London, Zoology 2 on page 80
Additional file 1: of Ketamine for depression relapse prevention following electroconvulsive therapy: protocol for a randomised pilot trial (the KEEP-WELL trial)
Creators: name: Finnegan, Martha
name: Ryan, Karen
name: Shanahan, Enda
name: Harkin, Andrew
name: Daly, Leslie
name: McLoughlin, Declan
Publisher: name: Figshare
Year: 2016
Subjects: subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Informed consent materials. (DOCX 26Â kb)
MOESM1 of Characterization and management of long runs of homozygosity in parental nucleus lines and their associated crossbred progeny
Creators: name: Howard, Jeremy
name: Tiezzi, Francesco
name: Yijian Huang
name: Gray, Kent
name: Maltecca, Christian
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: Plant Biology

description: Additional file 1. C++ code for creating run of homozygosity (ROH) based relationship matrices. This file contains the C++ code to generate a ROH-based relationship matrix along with a tutorial of how to compile and run the program.