cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Dual treatment with kynurenine pathway inhibitors and NAD+ precursors synergistically extends life span in Drosophila
Creators: name: Gabrawy, Mariann M.
name: Westbrook, Reyhan
name: King, Austin
name: Khosravian, Nick
name: Ochaney, Neeraj
name: DeCarvalho, Tagide
name: Wang, Qinchuan
name: Yu, Yuqiong
name: Huang, Qiao
name: Said, Adam
name: Abadir, Michael
name: Zhang, Cissy
name: Khare, Pratik
name: Fairman, Jennifer E.
name: Le, Anne
name: Milne, Ginger L.
name: Vonhoff, Fernando J
name: Walston, Jeremy D.
name: Abadir, Peter M.
Publisher: name: Wiley
Year: 2024
Subjects: aging
kyneurnine
longevity regulation
NAD
tryptophan

description: Tryptophan catabolism is highly conserved and generates important bioactive metabolites, including kynurenines, and in some animals, NAD+. Aging and inflammation are associated with increased levels of kynurenine pathway (KP) metabolites and depleted NAD+, factors which are implicated as contributors to frailty and morbidity. Contrastingly, KP suppression and NAD+ supplementation are associated with increased life span in some animals. Here, we used DGRP_229 Drosophila to elucidate the effects of KP elevation, KP suppression, and NAD+ supplementation on physical performance and survivorship. Flies were chronically fed kynurenines, KP inhibitors, NAD+ precursors, or a combination of KP inhibitors with NAD+ precursors. Flies with elevated kynurenines had reduced climbing speed, endurance, and life span. Treatment with a combination of KP inhibitors and NAD+ precursors preserved physical function and synergistically increased maximum life span. We conclude that KP flux can regulate health span and life span in Drosophila and that targeting KP and NAD+ metabolism can synergistically increase life span.
Additional file 12 of Multi-omics analysis of the bioactive constituents biosynthesis of glandular trichome in Perilla frutescens
Creators: name: Zhou, Peina
name: Yin, Mengjiao
name: Dai, Shilin
name: Bao, Ke
name: Song, Chenglin
name: Liu, Chanchan
name: Wu, Qinan
Publisher: name: figshare
Year: 2021
Subjects: subject: Plant Biology
subject: FOS: Biological sciences

description: Additional file 12: Supplementary Fig. 12. Classifications based on metabolism of terpenoids and polyketide.
A metrizable semitopological semilattice with non-closed partial order
Creators: name: Banakh, Taras
name: Bardyla, Serhii
name: Ravsky, Alex
Publisher: name: arXiv
Year: 2019
Subjects: subject: General Topology (math.GN)
subject: Group Theory (math.GR)
subject: FOS: Mathematics
subject: 54A20, 06A12, 22A26, 37B05

description: We construct a metrizable semitopological semilattice $X$ whose partial order $P=\{(x,y)\in X\times X:xy=x\}$ is a non-closed dense subset of $X\times X$. As a by-product we find necessary and sufficient conditions for the existence of a (metrizable) Hausdorff topology on a set, act, semigroup or semilattice, having a prescribed countable family of convergent sequences.
description: 8 pages
A Novel Clustering Protocol for Network Lifetime Maximization in Underwater Wireless Sensor Networks
Creators: name: Jha, Amitkumar V.
name: Appasani, Bhargav
name: Khan, Mohammad S.
name: Song, Houbing
Publisher: name: IEEE
Year: 2024
Subjects: Energy consumption
Wireless communication
Batteries
Clustering
Energy efficiency
lifetime maximization
Routing
Routing Protocol
Routing protocols
Wireless sensor network
Wireless sensor networks

description: Underwater wireless sensor network (UWSN) is a pervasive technology with different characteristics and requirements, where energy conservation is a stringent requirement. Improving the network lifetime can have tremendous practical utility in these networks. The energy of the nodes in the network can be conserved by devising an efficient cluster head selection mechanism. This paper presents a novel energy-efficient clustering protocol (EECP) for the UWSN. The proposed protocol segregates the network based on horizontal clustering. In every iteration, the cluster heads are selected based on the energy level of the nodes. The performance of the proposed protocol is measured in terms of energy efficiency and network lifetime. Moreover, the performance of the EECP is further improved by adding nearest neighbor criteria for selecting the cluster head. This protocol is named as energy-efficient clustering protocol with nearest neighbor (EECP-NN). The efficacy of the proposed protocols is evaluated by comparing their performance with some of the state-of-the-art cluster-based protocols in this study.
Thermodynamics of the spin-flop transition in a quantum XYZ chain
Creators: name: Wang, X.
name: Zotos, X.
name: Karadamoglou, J.
name: Papanicolaou, N.
Publisher: name: arXiv
Year: 2000
Subjects: subject: Condensed Matter (cond-mat)
subject: FOS: Physical sciences

description: A special limit of an antiferromagnetic XYZ chain was recently shown to exhibit interesting bulk as well as surface spin-flop transitions at T=0. Here we provide a complete calculation of the thermodynamics of the bulk transition using a transfer-matrix-renormalization-group (TMRG) method that addresses directly the thermodynamic limit of quantum spin chains. We also shed some light on certain spinwave anomalies at low temperature predicted earlier by Johnson and Bonner.
description: 4 pages, 6 Postscript figures
Additional file 6 of Construction of circRNA-miRNA-mRNA network and identification of novel potential biomarkers for non-small cell lung cancer
Creators: name: Yang, Jia
name: Hao, Ran
name: Zhang, Yunlong
name: Deng, Haibin
name: Teng, Wenjing
name: Wang, Zhongqi
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 6: Fig. S6 Correlation between miRNA-target genes and immune infiltration in NSCLC. The correlation between AKT3 (a), CNR1 (b), COL14A1 (c), FBXO9 (d) and immune infiltration in NSCLC was analyzed by using the TIMER database. NSCLC, non-small cell lung cancer.
Trichilia martiana C. DC.
Creators: name: Molino, Jean-François
name: Sabatier, Daniel
name: Grenand, Pierre
name: Engel, Julien
name: Frame, Dawn
name: Delprete, Piero G.
name: Fleury, Marie
name: Odonne, Guillaume
name: Davy, Damien
name: Lucas, Eve J.
name: Martin, Claire A.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Sapindales
Meliaceae
Trichilia
Trichilia martiana

description: [1132] Trichilia martiana C.DC.
 Fl. Bras. [Martius] 11 (1): 205 [1 Feb. 1878] (Candolle 1878).
 Trichilia insignis C.DC., Fl. Bras. [Martius] 11 (1): 206 [1 Feb. 1878] (Candolle 1878).
 Trichilia gaudichaudii C.DC., Fl. Bras. [Martius] 11 (1): 209 [1 Feb. 1878] (Candolle 1878).
 Trichilia caucana C.DC., Monogr. Phan. [A.DC. & C.DC.] 1: 669 [June 1878] (Candolle 1878).
 Trichilia cuneata Radlk., Sitzungsber. Math. -Phys. Cl. Königl. Bayer. Akad. Wiss. München 9: 642 (Radlkofer 1879).
 Trichilia fuscescens Radlk., Sitzungsber. Math. -Phys. Cl. Königl. Bayer. Akad. Wiss. München 9: 641 (Radlkofer 1879).
 Trichilia heydeana C.DC., Bot. Gaz. 19 (1): 3 [17 Jan. 1894] (Candolle 1894).
 Trichilia acutanthera C.DC., Bull. Herb. Boissier, sér. 2, 5: 422 (Candolle 1905).
 Trichilia biolleyi C.DC., Bull. Herb. Boissier, sér. 2, 5: 423 (Candolle 1905).
 Trichilia obtusanthera C.DC., Bull. Herb. Boissier, sér. 2, 5: 423 (Candolle 1905).
 Trichilia tonduzii C.DC., Bull. Herb. Boissier, sér. 2, 5: 423 (Candolle 1905).
 Trichilia biolleyi var. nicoyensis C.DC., Bull. Herb. Boissier, sér. 2, 5: 424 (Candolle 1905).
 Trichilia chiriquina C.DC., Smithsonian Misc. Collect. 68 (6): 6 [23 July 1917] (Candolle 1917).
 Trichilia oaxacana S.F.Blake, Contr. Gray Herb. 53: 58 [26 Feb. 1918] (Blake 1918).
 Trichilia izabalana S.F.Blake, Contr. U.S. Natl. Herb. 24 (1): 10 [11 Jan. 1922] (Blake 1922).
 Trichilia colombiana Cuatrec., Fieldiana, Bot. 27 (1): 81 (Cuatrecasas 1950).
 HERBARIUM DATA (FG). — 10 collections at CAY. Sel. exs.: R.A.A. Oldeman T-734.
 INVENTORY DATA (FG). — 17 trees in 10 plots; Fmax = 1.1 %; dbhinv = 47.6 cm.
description: Published as part of Molino, Jean-François, Sabatier, Daniel, Grenand, Pierre, Engel, Julien, Frame, Dawn, Delprete, Piero G., Fleury, Marie, Odonne, Guillaume, Davy, Damien, Lucas, Eve J. & Martin, Claire A., 2022, An annotated checklist of the tree species of French Guiana, including vernacular nomenclature, pp. 345-903 in Adansonia (3) (3) 44 (26) on pages 579-580, DOI: 10.5252/adansonia2022v44a26, http://zenodo.org/record/7458777
Supplementary materials for the Israel Journal of Ecology and Evolution: No evidence that Mycoplasma infection causes cognitive impairment during foraging in Allenby’s gerbil (Gerbillus andersoni allenbyi)
Creators: name: Goeppner, Scott R.
name: Sargunaraj, Franklin
name: Kotler, Burt P.
name: Srinivasan, Jansirani
name: Khadka, Janardan
name: Titus, Jaison
name: Godwin, James
name: Marriboina, Sureshbabu
name: Grandhi, Rohith
name: Singiri, Jeevan R.
Publisher: name: Brill Online
Year: 2024
Subjects: classificationCode: 310301
subject: Behavioural ecology

description: Pathogens can impose substantial ecological costs on infected individuals, including reduced cognition, foraging ability, and predator avoidance. In a prior experiment, gerbils infected with Mycoplasma haemomuris-like bacteria had higher giving up densities, despite spending more time foraging, and were more likely to be killed by predators. One hypothesis to explain this is that infected gerbils suffer from cognitive impairment that reduces their ability to forage efficiently, causing them to spend more time foraging and placing themselves at higher risk of predation. We tested this hypothesis by comparing the ability of gerbils uninfected, acutely infected, or chronically infected with Mycoplasma to equalize giving up densities (GUDs) in seed patches with different initial abundances and detect micropatches within seed patches in a semi-natural vivarium enclosure. We predicted that uninfected gerbils would equalize GUDs and detect micropatches better than infected gerbils. Contrary to our predictions, infected gerbils performed equally well as uninfected gerbils on both tasks. These experiments did not support the hypothesis that cognitive impairment explains past results regarding Mycoplasma and gerbil foraging.
Monte Carlo Study of Correlations in Quantum Spin Chains at Non-Zero Temperature
Creators: name: Kim, Y. J.
name: Greven, M.
name: Wiese, U. -J.
name: Birgeneau, R. J.
Publisher: name: arXiv
Year: 1997
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: Antiferromagnetic Heisenberg spin chains with various spin values ($S=1/2,1,3/2,2,5/2$) are studied numerically with the quantum Monte Carlo method. Effective spin $S$ chains are realized by ferromagnetically coupling $n=2S$ antiferromagnetic spin chains with $S=1/2$. The temperature dependence of the uniform susceptibility, the staggered susceptibility, and the static structure factor peak intensity are computed down to very low temperatures, $T/J \approx 0.01$. The correlation length at each temperature is deduced from numerical measurements of the instantaneous spin-spin correlation function. At high temperatures, very good agreement with exact results for the classical spin chain is obtained independent of the value of $S$. For $S$=2 chains which have a gap $Δ$, the correlation length and the uniform susceptibility in the temperature range $Δ< T < J$ are well predicted by a semi-classical theory due to Damle and Sachdev.
description: LaTeX EPJ macro
Shortwave reflected energy from NISTAR and the Earth Polychromatic Imaging Camera onboard the DSCOVR spacecraft
Creators: name: Weaver, Clark Jay
name: Herman, Jay
name: Marshak, Alexander
name: Lorentz, Steven R.
name: Yu, Yinan
name: Smith, Allan W.
name: Szabo, Adam
Publisher: name: EGU
Year: 2023

description: We describe a new method for estimating the total reflected shortwave energy from the Earth Polychromatic Imaging Camera (EPIC) and compare it with direct measurements from the NIST Advanced Radiometer (NISTAR) instrument (Electrical substitution radiometer) – both are onboard the Lagrange-1 orbiting Deep Space Climate Observatory (DSCOVR). The 6 narrow-band wavelength channels (340 to 780 nm) available from EPIC provide a framework for estimating the integrated spectral energy for each EPIC pixel. The Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) and the SCIAMACHY instrument provide spectral information away from the EPIC wavelengths, particularly for wavelengths longer than 780 nm. The total area-weighted reflected shortwave energy from an entire EPIC image is compared with co-temporal Band B Shortwave reflected energy observed by NISTAR. Our analysis from March to December 2017 shows the two are highly correlated with differences ranging from -10 to 10 Watts m-2. The offset bias over the entire period is less than 0.2 Watts m-2. We also compare our EPIC energy maps with the Clouds and the Earth’s Radiant Energy System (CERES) Single Scanner Footprint (SSF) Shortwave (SW) reflected energy observed within 3 hours of an EPIC image. Our EPIC-AVIRIS SW estimate is 5–20 % higher near the EPIC image center and 5–20 % lower near the image edges compared with the CERES SSF.
Additional file 7 of Construction of circRNA-miRNA-mRNA network and identification of novel potential biomarkers for non-small cell lung cancer
Creators: name: Yang, Jia
name: Hao, Ran
name: Zhang, Yunlong
name: Deng, Haibin
name: Teng, Wenjing
name: Wang, Zhongqi
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 7: Fig. S7 Correlation between miRNA-target genes and immune infiltration in NSCLC. The correlation between HIP1 (a), PIK3R1 (b), PLAC8 (c), TOLLIP (d) and immune infiltration in NSCLC was analyzed by using the TIMER database. NSCLC, non-small cell lung cancer.
Advancing Security in AI Systems: A Novel Approach to Detecting Backdoors in Deep Neural Networks
Creators: name: Hossain, Khondoker Murad
name: Oates, Tim
Publisher: name: Maryland Shared Open Access Repository
Year: 2024
Subjects: Computer Science - Cryptography and Security
Computer Science - Computer Vision and Pattern Recognition

description: In the rapidly evolving landscape of communication and network security, the increasing reliance on deep neural networks (DNNs) and cloud services for data processing presents a significant vulnerability: the potential for backdoors that can be exploited by malicious actors. Our approach leverages advanced tensor decomposition algorithms Independent Vector Analysis (IVA), Multiset Canonical Correlation Analysis (MCCA), and Parallel Factor Analysis (PARAFAC2) to meticulously analyze the weights of pre-trained DNNs and distinguish between backdoored and clean models effectively. The key strengths of our method lie in its domain independence, adaptability to various network architectures, and ability to operate without access to the training data of the scrutinized models. This not only ensures versatility across different application scenarios but also addresses the challenge of identifying backdoors without prior knowledge of the specific triggers employed to alter network behavior. We have applied our detection pipeline to three distinct computer vision datasets, encompassing both image classification and object detection tasks. The results demonstrate a marked improvement in both accuracy and efficiency over existing backdoor detection methods. This advancement enhances the security of deep learning and AI in networked systems, providing essential cybersecurity against evolving threats in emerging technologies.
Additional file 1 of A systematic review of prediction models to diagnose COVID-19 in adults admitted to healthcare centers
Creators: name: Locquet, Médéa
name: Diep, Anh Nguyet
name: Beaudart, Charlotte
name: Dardenne, Nadia
name: Brabant, Christian
name: Bruyère, Olivier
name: Donneau, Anne-Françoise
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer
subject: Science Policy

description: Additional file 1: Supplementary material. Search strategy and listing of excluded studies at the full-text stage.
Phonon-Drag Thermopower at High Temperatures
Creators: name: Vdovenkov, V. A.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: The adiabatic cristal model is offered. It is shown that springy nuclei oscillations relatively electronic envelops and waves of such oscillations (inherent oscillations and waves) may exist in crystals. The analysis of experimental temperature dependencies of resistivity in semiconductors with electron-vibrational centres has shown that inherent oscillations effectively interact with crystalline phonons as well as with electrons and holes, creating powerful interaction of electrons and holes with phonons. The experimental narrow peaks of phonon-drag thermoelectric power at Debye temperatures from 77K to 700K confirm existence of inherent oscillations waves in crystals. Inherent oscillations and waves gives rise to strong electron-phonon interaction and probably can bring about superconductivity at temperatures as below so and well above room temperature.
description: Latex, 9 pages,5 figures
title: Initial and continuance acceptance of wearable health devices
Creators: name: Alsiyabi, Nasar B.
Publisher: name: University of Reading
Year: 2023

description: Smart devices, particularly wearable fitness trackers, have gained considerable attention as 
part of the Internet of Things (IoT) in various industries. These IoT-enabled wearable health 
devices have the potential to improve quality of life, promote healthy habits, and reduce 
medical expenses. However, customer concerns about the privacy of their healthcare 
information pose a challenge to the widespread adoption of these devices. Additionally, many 
users discontinue their use of wearable devices over time, highlighting the need to understand 
the factors driving or discouraging their usage.
This research addresses the gap in academic literature regarding the factors influencing the 
initial and continued adoption of wearable technology. Two conceptual models were developed 
to investigate these factors, focusing on perceived privacy, perceived risk, user satisfaction, 
and the impact of underlying health conditions. The first model combines the UTAUT2 and 
DeLone and McLean models to capture the initial adoption of IoT health wearables, while the 
second model incorporates UTAUT2, DeLone and McLean, and ECM to analyze the 
continuance adoption of these devices.
Quantitative deductive methods were employed, utilizing two separate online surveys—one 
for pre-users and another for post-users of IoT wearables—to validate the conceptual models. 
The data collected from 266 pre-users and 365 post-users were analyzed using partial least 
squares structural equation modeling (SmartPLS). The findings indicate that performance 
expectancy, social influence, hedonic motivation, system quality, service quality, and expected 
satisfaction influence potential consumers' intentions to adopt IoT health wearables. Similarly, 
experienced users are influenced by performance expectancy, price value, hedonic motivation, 
perceived privacy, information quality, and satisfaction. Information, system, and service 
quality significantly impact satisfaction in both models. Additionally, the study examines the 
moderating effect of underlying health conditions on the relationships between perceived 
privacy and use, perceived risk and use, and satisfaction and data sharing. The results indicate 
a positive moderating effect between satisfaction and data sharing, but only in the 'continuance 
use' model.
This research provides valuable insights into the factors affecting the adoption and continued 
use of IoT health wearables, contributing to a comprehensive understanding of the 
phenomenon. The findings have implications for individuals, healthcare providers, and 
industries involved in the development and marketing of wearable technology.
Additional file 11 of Multi-omics analysis of the bioactive constituents biosynthesis of glandular trichome in Perilla frutescens
Creators: name: Zhou, Peina
name: Yin, Mengjiao
name: Dai, Shilin
name: Bao, Ke
name: Song, Chenglin
name: Liu, Chanchan
name: Wu, Qinan
Publisher: name: figshare
Year: 2021
Subjects: subject: Plant Biology
subject: FOS: Biological sciences

description: Additional file 11: Supplementary Fig. 11. Heatmap of trichome branching (A), trichome differentiation(B) and trichome morphogenesis (C).
Brooke Lierman on Maryland's Slow Economy
Creators: name: Dasgupta, Sunil
name: Lierman, Brooke
Publisher: name: I Hate Politics Podcasts
Year: 2024
Subjects: I Hate Politics

description: In the face of population loss and sluggish economic growth in the state, Maryland’s Comptroller Brooke Lierman commissioned a State of the Economy Report. Lierman talks with Sunil Dasgupta about the central findings and implications of the report including women’s participation in the state labor market, housing affordability, childcare, and more. Music from Washington DC garage punk band, Apollo 66: apollo66rock.com.
Correlation lengths and E_8 mass spectrum of the dilute A_3 lattice model
Creators: name: Batchelor, M. T.
name: Seaton, K. A.
Publisher: name: arXiv
Year: 1997
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: The exact perturbation approach is used to derive the elementary correlation lengths $ξ_i$ and related mass gaps $m_i$ of the two-dimensional dilute A_L lattice model in regimes 1 and 2 for L odd from the Bethe Ansatz solution. In regime 2 the A_3 model is the E_8 lattice realisation of the two-dimensional Ising model in a magnetic field at T=T_c. The calculations for the A_3 model in regime 2 start from the eight thermodynamically significant string types found in previous numerical studies. These string types are seen to be consistent in the ordered high field limit. The eight masses obtained reduce with the approach to criticality to the E_8 masses predicted by Zamolodchikov, thus providing a further direct lattice determination of the E_8 mass spectrum.
description: 57 pages, Latex, Elsevier style files
Trichilia micrantha Benth.
Creators: name: Molino, Jean-François
name: Sabatier, Daniel
name: Grenand, Pierre
name: Engel, Julien
name: Frame, Dawn
name: Delprete, Piero G.
name: Fleury, Marie
name: Odonne, Guillaume
name: Davy, Damien
name: Lucas, Eve J.
name: Martin, Claire A.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Sapindales
Meliaceae
Trichilia
Trichilia micrantha

description: [1133] Trichilia micrantha Benth.
 Hooker’s J. Bot. Kew Gard. Misc. 3: 369 (Bentham 1851).
 Trichilia roraimana C.DC., Monogr. Phan. [A.DC. & C.DC.] 1: 670 [June 1878] (Candolle 1878).
 Trichilia harmsii Rusby, Bull. New York Bot. Gard. 4 (14): 338 [7 Dec. 1907] (Rusby 1907).
 Trichilia acariaeantha Harms, Notizbl. Bot. Gart. Berlin-Dahlem 9: 431 [31 Oct. 1925] (Harms 1925).
 Trichilia buchtienii Harms, Notizbl. Bot. Gart. Berlin-Dahlem 11: 386 [30 Mar. 1932] (Harms 1932).
 NOTE. — Hyperdominant in Amazonia (ter Steege et al. 2020).
VERNACULAR NAMES. — Pa: kawap-kamwi • Nt: samaati • Br: cedro-bravo, jitó-branco.
 HERBARIUM DATA (FG). — 29 collections at CAY. Sel. exs.: D. Sabatier & M.-F. Prévost 3333.
INVENTORY DATA (FG). — 80 trees in 46 plots; Fmax = 1.2 %; dbhinv = 25.9 cm.
description: Published as part of Molino, Jean-François, Sabatier, Daniel, Grenand, Pierre, Engel, Julien, Frame, Dawn, Delprete, Piero G., Fleury, Marie, Odonne, Guillaume, Davy, Damien, Lucas, Eve J. & Martin, Claire A., 2022, An annotated checklist of the tree species of French Guiana, including vernacular nomenclature, pp. 345-903 in Adansonia (3) (3) 44 (26) on page 580, DOI: 10.5252/adansonia2022v44a26, http://zenodo.org/record/7458777
Additional file 3 of Association between physical activity and mortality in end-stage kidney disease: a systematic review of observational studies
Creators: name: Martins, Pedro
name: Marques, Elisa A.
name: Leal, Diogo V.
name: Ferreira, Aníbal
name: Wilund, Kenneth R
name: Viana, João L.
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Science Policy
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Marine Biology
subject: Cancer

description: PRISMA Checklist. Twenty-seven-item checklist reporting of a systematic review.
In-situ fabrication of Mo6S6 nanowire terminated edges in monolayer molybdenum disulfide
Creators: name: Huang, Wei
name: Wang, Xiaowei
name: Ji, Xujing
name: Zhang, Ze
name: Jin, Chuanhong
Publisher: name: arXiv
Year: 2018
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Edge structures are highly relevant to the electronic, magnetic and catalytic properties of two-dimensional (2D) transition metal dichalcogenides (TMDs) and their one dimensional (1D) counterpart, i.e., nanoribbons, which should be precisely tailored for the desirable applications. In this work, we report the formation of novel Mo6S6 nanowire (NW) terminated edges in a monolayer molybdenum disulfide (MoS2) via an e-beam irradiation process combined with high temperature heating in a scanning transmission electron microscope (STEM). Atomic structures of NW terminated edges and the dynamic formation process were observed experimentally. Further analysis shows that NW terminated edge could form on both Mo-zigzag (ZZ) edge and S-ZZ edge which can exhibit even higher stability superior to the pristine zigzag (ZZ) and armchair (AC) edge. In addition, the analogous edge structures can be also formed in MoS2 nanoribbon and other TMDs material such as MoxW1-xSe2. We believe that the presence of these novel edge structures in 2D and 1D TMD materials may provide novel properties and new opportunities for their versatile applications including catalytic, spintronic and electronic devices.
description: 10 pages,4 figures
On the Decoupling of the Homogeneous and Inhomogeneous Parts in Inhomogeneous Quantum Groups
Creators: name: Fiore, Gaetano
Publisher: name: arXiv
Year: 2001
Subjects: subject: Quantum Algebra (math.QA)
subject: Group Theory (math.GR)
subject: FOS: Mathematics
subject: 81R50, 17B37

description: We show that, if there exists a realization of a Hopf algebra $H$ in a $H$-module algebra $A$, then one can split their cross-product into the tensor product algebra of $A$ itself with a subalgebra isomorphic to $H$ and commuting with $A$. This result applies in particular to the algebra underlying inhomogeneous quantum groups like the Euclidean ones, which are obtained as cross-products of the quantum Euclidean spaces $R_q^N$ with the quantum groups of rotation $U_qso(N)$ of $R_q^N$, for which it has no classical analog.
description: Latex file, 27 pages. Final version to appear in J. Phys. A
Trichilia micropetala T. D. Penn.
Creators: name: Molino, Jean-François
name: Sabatier, Daniel
name: Grenand, Pierre
name: Engel, Julien
name: Frame, Dawn
name: Delprete, Piero G.
name: Fleury, Marie
name: Odonne, Guillaume
name: Davy, Damien
name: Lucas, Eve J.
name: Martin, Claire A.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Sapindales
Meliaceae
Trichilia
Trichilia micropetala

description: [1134] Trichilia micropetala T.D.Penn.
 Fl. Neotrop. Monogr. 28: 172 [4 Dec. 1981] (Pennington 1981).
 HERBARIUM DATA (FG). — 2 collections at CAY. Sel. exs.: C. Moretti 979.
INVENTORY DATA (FG). — 6 trees in 1 plot; Fmax <1 %; dbhinv = 11.5 cm.
description: Published as part of Molino, Jean-François, Sabatier, Daniel, Grenand, Pierre, Engel, Julien, Frame, Dawn, Delprete, Piero G., Fleury, Marie, Odonne, Guillaume, Davy, Damien, Lucas, Eve J. & Martin, Claire A., 2022, An annotated checklist of the tree species of French Guiana, including vernacular nomenclature, pp. 345-903 in Adansonia (3) (3) 44 (26) on page 580, DOI: 10.5252/adansonia2022v44a26, http://zenodo.org/record/7458777
Additional file 10 of Multi-omics analysis of the bioactive constituents biosynthesis of glandular trichome in Perilla frutescens
Creators: name: Zhou, Peina
name: Yin, Mengjiao
name: Dai, Shilin
name: Bao, Ke
name: Song, Chenglin
name: Liu, Chanchan
name: Wu, Qinan
Publisher: name: figshare
Year: 2021
Subjects: subject: Plant Biology
subject: FOS: Biological sciences

description: Additional file 10: Supplementary Fig. 10. GO classifications and KEGG pathway of S vs R (A, D), L vs S (B,E) and L vs R (C, F).
Transmission and reflection studies of periodic and random systems with gain
Creators: name: Jiang, Xunya
name: Soukoulis, C. M.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: The transmission (T) and reflection (R) coefficients are studied in periodic systems and random systems with gain. For both the periodic electronic tight-binding model and the periodic classical many-layered model, we obtain numerically and theoretically the dependence of T and R. The critical length of periodic system L[sub c][sup 0], above which T decreases with the size of the system L while R approaches a constant value, is obtained to be inversely proportional to the imaginary part cursive-epsilon (double-prime) of the dielectric function cursive-epsilon . For the random system, T and R also show a nonmonotonic behavior versus L. For short systems (L < Lc) with gain (left-angle)ln T(right-angle) = (l[sub g][sup -1] - xi [sub 0][sup -1])L. For large systems (L(very-much-greater-than)Lc) with gain (left-angle)ln T(right-angle) = - (l[sub g][sup -1] + xi [sub 0][sup -1])L. Lc, lg, and xi 0 are the critical, gain, and localization lengths, respectively. The dependence of the critical length Lc on cursive-epsilon (double-prime) and disorder strength W are also given. Finally, the probability distribution of the reflection R for random systems with gain is also examined. Some very interesting behaviors are observed.
description: 8 pages, 8 figures
Bayesian Inference for High-dimensional Time Series by Latent Process Modeling
Creators: name: Roy, Arkaprava
name: Roy, Anindya
name: Ghosal, Subhashis
Publisher: name: Maryland Shared Open Access Repository
Year: 2024
Subjects: Mathematics - Statistics Theory
Statistics - Methodology

description: Time series data arising in many applications nowadays are high-dimensional. A large number of parameters describe features of these time series. We propose a novel approach to modeling a high-dimensional time series through several independent univariate time series, which are then orthogonally rotated and sparsely linearly transformed. With this approach, any specified intrinsic relations among component time series given by a graphical structure can be maintained at all time snapshots. We call the resulting process an Orthogonally-rotated Univariate Time series (OUT). Key structural properties of time series such as stationarity and causality can be easily accommodated in the OUT model. For Bayesian inference, we put suitable prior distributions on the spectral densities of the independent latent times series, the orthogonal rotation matrix, and the common precision matrix of the component times series at every time point. A likelihood is constructed using the Whittle approximation for univariate latent time series. An efficient Markov Chain Monte Carlo (MCMC) algorithm is developed for posterior computation. We study the convergence of the pseudo-posterior distribution based on the Whittle likelihood for the model's parameters upon developing a new general posterior convergence theorem for pseudo-posteriors. We find that the posterior contraction rate for independent observations essentially prevails in the OUT model under very mild conditions on the temporal dependence described in terms of the smoothness of the corresponding spectral densities. Through a simulation study, we compare the accuracy of estimating the parameters and identifying the graphical structure with other approaches. We apply the proposed methodology to analyze a dataset on different industrial components of the US gross domestic product between 2010 and 2019 and predict future observations.
Trichilia schomburgkii C. DC.
Creators: name: Molino, Jean-François
name: Sabatier, Daniel
name: Grenand, Pierre
name: Engel, Julien
name: Frame, Dawn
name: Delprete, Piero G.
name: Fleury, Marie
name: Odonne, Guillaume
name: Davy, Damien
name: Lucas, Eve J.
name: Martin, Claire A.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Sapindales
Meliaceae
Trichilia
Trichilia schomburgkii

description: [1137] Trichilia schomburgkii C.DC.
 Monogr. Phan. [A.DC. & C.DC.] 1: 695 [June 1878] (Candolle 1878).
 Trichilia subsessilifolia C.DC., Monogr. Phan. [A.DC. & C.DC.] 1: 685 [June 1878] (Candolle 1878).
 Trichilia cuneifolia Pulle, Recueil Trav. Bot. Néerl. 6: 272 (Pulle 1909).
 Trichilia siqueiraei Ducke, Arch. Jard. Bot. Rio de Janeiro 3: 192 (Ducke 1922).
VERNACULAR NAMES. — Pa: ahuwahu-puvemna, auwau-puvemna, kawap • Ka: alawata pana, inyamu ekunalɨ wewe • Wp: yatoa’ɨ sĩ • Wn: akalali.
 HERBARIUM DATA (FG). — 24 collections at CAY. Sel. exs.: D. Sabatier & M.-F. Prévost 3090.
INVENTORY DATA (FG). — 181 trees in 64 plots; Fmax = 2.9 %; dbhinv = 57.3 cm.
description: Published as part of Molino, Jean-François, Sabatier, Daniel, Grenand, Pierre, Engel, Julien, Frame, Dawn, Delprete, Piero G., Fleury, Marie, Odonne, Guillaume, Davy, Damien, Lucas, Eve J. & Martin, Claire A., 2022, An annotated checklist of the tree species of French Guiana, including vernacular nomenclature, pp. 345-903 in Adansonia (3) (3) 44 (26) on page 581, DOI: 10.5252/adansonia2022v44a26, http://zenodo.org/record/7458777
Campylaspis angelae Petrescu 2006
Creators: name: Petrescu, Iorgu
Publisher: name: Zenodo
Year: 2018
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Cumacea
Nannastacidae
Campylaspis
Campylaspis angelae

description: Campylaspis angelae Petrescu, 2006
 Campylaspis angelae Petrescu, 2006: 132–133, figs 3,4.
 Material examined: 1♀, P.88253.
 Distribution. Australia: NSW—shelf break off Nowra, at 204 m (Petrescu, 2006), and now from east of Long Reef Point, at 176 m depth.
description: Published as part of Petrescu, Iorgu, 2018, On the Family Nannastacidae (Crustacea, Cumacea) from the Australian Museum Collection, pp. 1-111 in Records of the Australian Museum 70 (1) on page 9, DOI: 10.3853/j.2201-4349.70.2018.1645, http://zenodo.org/record/5236860
Additional file 2 of Association between physical activity and mortality in end-stage kidney disease: a systematic review of observational studies
Creators: name: Martins, Pedro
name: Marques, Elisa A.
name: Leal, Diogo V.
name: Ferreira, Aníbal
name: Wilund, Kenneth R
name: Viana, João L.
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Science Policy
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Marine Biology
subject: Cancer

description: Quality assessment of the included studies (adapted Quality in Prognosis Studies tool).
Quantum Optics in Dense Atomic Media: From Optical Memories to Fluids of Light
Creators: name: Glorieux, Quentin
Publisher: name: arXiv
Year: 2018
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: This Habilitation manuscript describes the work done at JQI-NIST and LKB-ENS-Sorbonne University since 2010. After a brief introduction of the needed concepts for non-linear and quantum optics in optically dense atomic medium, I review several experiments about the Gradient Echo Memory protocol in warm atomic vapors and in cold atomic clouds, and especially the multi-mode properties of this memory. In the next chapter I describe two experiments of quantum optics in dense atomic medium : the possibility to image using quantum noise and the propagation of quantum mutual information in a fast-light medium. In chapter 4 I study two recents experiments about hydrodynamics of light in exciton-polariton systems and in warm atomic vapor. Finally I present the future project of my group at LKB. The main goal of this manuscript is to provide the tools to connect non-linear and quantum optics to quantum fluids of light. Because the physics of matter quantum fluids and fluids of light has long been the territory of condensed matter physicists, it is uncommon to find textbooks which draw the analogies with quantum optics. I have taken the reverse trajectory, being trained as a quantum optician and moving progressively to quantum gases and quantum fluids of light. Naturally, I try to use the concepts and resources developed by the quantum optics community to improve experiment about fluids of light, but I also reverse the approach and ask a very simple question: what does the concept of fluid of light bring to our understanding of non-linear and quantum optics ? It can be rephrased as an operational question: which new effects can we predict (and possibly observe) using the photon fluid formalism ?
description: Copyrighted material are not available inside this manuscript. You can find a full version on the author webpage www.quantumoptics.fr
"1924–1932 ЙИЛЛАРДА ЎЗБЕКИСТОН САНОАТ РИВОЖЛАНИШИ: ВАЗИФАЛАР, БОСҚИЧЛАР ВА НАТИЖАЛАР (ФАРҒОНА ВОДИЙСИ МИСОЛИДА)"
Creators: name: Olimjanova, Zuxraxon
Publisher: name: Zenodo
Year: 2025

description: Mazkur maqolada 1924–1932 yillarda UzSSRda sanoat rivojlanishi.
Probing In Operando Manganese Dissolution and Associated Mechanical Deformation in LiMn2O4 Cathodes
Creators: name: Zhao, Lihong
name: Çapraz, Ömer Özgür
name: Sottos, Nancy R.
Publisher: name: ACS
Year: 2024

description: Mn dissolution has been an Achilles heel of cost-effective Mn-based transition metal oxide cathodes, such as spinel LiMn2O4 (LMO). The Mn dissolution leads to rapid capacity fade due to degradation in the cathode structure and formation of a solid-electrolyte interface on anodes. Extensive ex situ and chronical studies have unveiled that unfavorable cycling conditions lead to manganese dissolution into the electrolyte; however, the mechanism behind the manganese dissolution remains under debate. Here, we report the operando Mn dissolution profile and its correlation with the electro-chemomechanical instabilities in the LMO cathode. We carried out operando characterization of Mn ion concentration in the electrolyte via UV–vis spectroscopy and in operando strain measurement in the cathode using digital image correlation. Mn dissolution is accompanied by strain evolution in the LMO induced by phase transition. Overdischarging further exacerbates the dissolution in successive cycles. Image analysis further tracks the distribution and transport of the Mn species in the electrolyte during cycling. We foresee that in operando electro-chemo-mechanical techniques developed in this study can be applied to investigate transition metal dissolution in other battery cathodes.
Off-diagonal disorder in the Anderson model of localization
Creators: name: Biswas, P.
name: Cain, P.
name: Roemer, R. A.
name: Schreiber, M.
Publisher: name: arXiv
Year: 2000
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: We examine the localization properties of the Anderson Hamiltonian with additional off-diagonal disorder using the transfer-matrix method and finite-size scaling. We compute the localization lengths and study the metal-insulator transition (MIT) as a function of diagonal disorder, as well as its energy dependence. Furthermore we investigate the different influence of odd and even system sizes on the localization properties in quasi one-dimensional systems. Applying the finite-size scaling approach in conjunction with a nonlinear fitting procedure yields the critical parameters of the MIT. In three dimensions, we find that the resulting critical exponent of the localization length agrees with the exponent for the Anderson model with pure diagonal disorder.
description: 12 pages including 4 EPS figures, accepted for publication in phys. stat. sol. (b)
Non-equilibrium spin density and spin-orbit torque in three dimensional topological insulators - antiferromagnet heterostructure
Creators: name: Ghosh, Sumit
name: Manchon, Aurelien
Publisher: name: arXiv
Year: 2019
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We study the behavior of non-equilibrium spin density and spin-orbit torque in a topological insulator - antiferromagnet heterostructure. Unlike ferromagnetic heterostructures where Dirac cone is gapped due to time-reversal symmetry breaking, here the Dirac cone is preserved. We demonstrate the existence of a staggered spin density corresponding to a damping like torque, which is quite robust against the scalar impurity, when the transport energy is in the topological insulator surface energy regime. We show the contribution to the non-equilibrium spin density due to both surface and bulk topological insulator bands. Finally, we show that the torques in topological insulator-antiferromagnet heterostructure exhibit an angular dependence that is consistent with the standard spin-orbit torque obtained in Rashba system with some additional nonlinear effects arising from the interfacial coupling.
description: 9 pages, 11 figures
Exchange interaction effects in inter-Landau level Auger scattering in a two-dimensional electron gas
Creators: name: Tsitsishvili, E.
name: Levinson, Y.
Publisher: name: arXiv
Year: 1997
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We consider the influence of spin effects on the inter-Landau level electron-electron scattering rate in a two-dimensional electron gas. Due to the exchange spin splitting, the Landau levels are not equidistant. This leads to the suppresion of Auger processes and a nonlinear dependence of the lifetime on the concentration of the excited electrons even at very low excitation levels.
description: 10 pages, 3 figures
Trichilia surinamensis C. DC.
Creators: name: Molino, Jean-François
name: Sabatier, Daniel
name: Grenand, Pierre
name: Engel, Julien
name: Frame, Dawn
name: Delprete, Piero G.
name: Fleury, Marie
name: Odonne, Guillaume
name: Davy, Damien
name: Lucas, Eve J.
name: Martin, Claire A.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Sapindales
Meliaceae
Trichilia
Trichilia surinamensis

description: [1139] Trichilia surinamensis (Miq.) C.DC.
 Monogr. Phan. [A.DC. & C.DC.] 1: 697 [June 1878] (Candolle 1878). — Moschoxylum surinamense Miq., Stirp. Surinam. Select.: 73 [“1850” publ. Mar. 1851] (Miquel 1851).
VERNACULAR NAMES. — Wp: wɨla pɨsi’u, yatoa’ɨu.
 HERBARIUM DATA (FG). — 56 collections at CAY. Sel. exs.: J.-F. Molino & D. Sabatier 2797.
INVENTORY DATA (FG). — 82 trees in 29 plots; Fmax = 2 %; dbhinv = 27.4 cm.
description: Published as part of Molino, Jean-François, Sabatier, Daniel, Grenand, Pierre, Engel, Julien, Frame, Dawn, Delprete, Piero G., Fleury, Marie, Odonne, Guillaume, Davy, Damien, Lucas, Eve J. & Martin, Claire A., 2022, An annotated checklist of the tree species of French Guiana, including vernacular nomenclature, pp. 345-903 in Adansonia (3) (3) 44 (26) on page 582, DOI: 10.5252/adansonia2022v44a26, http://zenodo.org/record/7458777
Automatic Test Improvement with DSpot: a Study with Ten Mature Open-Source Projects
Creators: name: Danglot, Benjamin
name: Vera-Pérez, Oscar Luis
name: Baudry, Benoit
name: Monperrus, Martin
Publisher: name: arXiv
Year: 2018
Subjects: subject: Software Engineering (cs.SE)
subject: FOS: Computer and information sciences

description: In the literature, there is a rather clear segregation between manually written tests by developers and automatically generated ones. In this paper, we explore a third solution: to automatically improve existing test cases written by developers. We present the concept, design, and implementation of a system called \dspot, that takes developer-written test cases as input (junit tests in Java) and synthesizes improved versions of them as output. Those test improvements are given back to developers as patches or pull requests, that can be directly integrated in the main branch of the test code base. We have evaluated DSpot in a deep, systematic manner over 40 real-world unit test classes from 10 notable and open-source software projects. We have amplified all test methods from those 40 unit test classes. In 26/40 cases, DSpot is able to automatically improve the test under study, by triggering new behaviors and adding new valuable assertions. Next, for ten projects under consideration, we have proposed a test improvement automatically synthesized by \dspot to the lead developers. In total, 13/19 proposed test improvements were accepted by the developers and merged into the main code base. This shows that DSpot is capable of automatically improving unit-tests in real-world, large-scale Java software.
Fair-DSP: Fair Dynamic Survival Prediction on Longitudinal Electronic Health Record
Creators: name: Huang, Xin
name: Meng, Xiangyang
name: Zhao, Ni
name: Zhang, Wenbin
name: Wang, Jianwu
Publisher: name: Springer
Year: 2023
Subjects: Deep learning
Dynamic survival analysis
EHR
Fairness

description: International Conference on Big Data Analytics and Knowledge Discovery
description: Scarce medical resources and highly transmissible diseases may overwhelm healthcare infrastructure. Fair allocation based on disease progression and fair distribution among all demographic groups is demanded by society. Surprisingly, there is little work quantifying and ensuring fairness in the context of dynamic survival prediction to equally allocate medical resources. In this study, we formulate individual and group fairness metrics in the context of dynamic survival analysis with time-dependent covariates, in order to provide the necessary foundations to quantitatively analyze the fairness in dynamic survival analysis. We further develop a fairness-aware learner (Fair-DSP) that is generic and can be applied to a dynamic survival prediction model. The proposed learner specifically accounts for time-dependent covariates to ensure accurate predictions while maintaining fairness on the individual or group level. We conduct quantitative experiments and sensitivity studies on the real-world clinical PBC dataset. The results demonstrate that the proposed fairness notations and debiasing algorithm are capable of guaranteeing fairness in the presence of accurate prediction.