cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Confinement and polarity effects on the peptide packing density on mesoporous silica nanoparticles
Creators: name: Beitzinger, Bastian
name: Schmid, Roman
name: Jung, Christoph
name: Tiwary, Kanishka
name: Hermann, Patrick
name: Jacob, Timo
name: Linden, Mika
Publisher: name: Universität Ulm
Year: 2024
Subjects: subject: Adsorption
subject: Isotherms
subject: Nanoparticles
subject: Peptides and proteins
subject: Silica
subject: DDC 540 / Chemistry & allied sciences

description: The adsorption of cationic peptide JM21 onto different mesoporous silica nanoparticles (MSNs) from an aqueous solution was studied as a function of pH. In agreement with the literature, the highest loading degrees could be achieved at pH close to the isoelectric point of the peptide where the peptide–peptide repulsion is minimum. However, mesopore size, mesopore geometry, and surface polarity all had an influence on the peptide adsorption in terms of both affinity and maximum loading at a given pH. This adsorption behavior could largely be explained by a combination of pH-dependent electrostatic interactions and confinement effects. It is demonstrated that hydrophobic interactions enhance the degree of peptide adsorption under pH conditions where the electrostatic attraction was absent in the case of mesoporous organosilica nanoparticles (MONs). The lower surface concentration of silanol groups for MON led to a lower level of peptide adsorption under optimum pH conditions compared to all-silica particles. Finally, the study confirmed the protective role of MSNs in preserving the biological activity of JM#21 against enzymatic degradation, even for large-pore MSNs, emphasizing their potential as nanocarriers for therapeutic peptides. By integrating experimental findings with theoretical modeling, this research elucidates the complex interplay of factors that influence peptide–silica interactions, providing vital insights for optimizing peptide loading and stabilization in biomedical applications.
Additional file 5 of Comparative Effectiveness of Multiple Exercise Interventions in the Treatment of Mental Health Disorders: A Systematic Review and Network Meta-Analysis
Creators: name: Yu, Qian
name: Wong, Ka-Kit
name: Lei, On-Kei
name: Nie, Jinlei
name: Shi, Qingde
name: Zou, Liye
name: Kong, Zhaowei
Publisher: name: figshare
Year: 2022
Subjects: Medicine
Biotechnology
Cancer
Science Policy
Mental Health

description: Additional file 5: Appendix 4. Included Studies List.
p-wave triggered superconductivity in single layer graphene on an electron-doped oxide superconductor
Creators: name: Di Bernardo, Angelo
name: Millo, Oded
name: Barbone, Matteo
name: Alpern, Hen
name: Kalcheim, Yoav
name: Sassi, Ugo
name: Ott, Anna
name: De Fazio, Domenico
name: Yoon, Duhee
name: Amado, Mario
name: Ferrari, Andrea C.
name: Linder, Jacob
name: Robinson, Jason W. A.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Electron pairing in the vast majority of superconductors follows the Bardeen-Cooper-Schrieffer theory of superconductivity, which describes the condensation of electrons into pairs with antiparallel spins in a singlet state with an s-wave symmetry. Unconventional superconductivity is predicted in single layer graphene where the electrons pair with a p-wave or chiral d-wave symmetry, depending on the position of the Fermi energy with respect to the Dirac point. By placing single layer graphene on an electron-doped (non-chiral) d-wave superconductor and performing local scanning tunnelling microscopy and spectroscopy, here we show evidence for a p-wave triggered superconducting density of states in single layer graphene. The realization of unconventional superconductivity in single layer graphene offers an exciting new route for the development of p-wave superconductivity using two-dimensional materials with transition temperatures above 4.2 K.
Additional file 4: of Biomarkers of inflammation in infants with cystic fibrosis
Creators: name: Laguna, Theresa
name: Williams, Cynthia
name: Nunez, Myra
name: Welchlin-Bradford, Cole
name: Moen, Catherine
name: Reilly, Cavan
name: Wendt, Chris
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Table summarizing the culture results for all CF infants. (PDF 34 kb)
Fabrication of Low-Cost Miniaturized Gas Cells via SLA 3D-Printing for UV-Based Gas Sensors
Creators: name: Barreto, Diandra Nunes
name: Gelamo, Rogério
name: Mizaikoff, Boris
name: Petruci, João Flávio Da Silveira
Publisher: name: Universität Ulm
Year: 2024
Subjects: subject: 3D printing
subject: Aluminum
subject: Ketones
subject: Light
subject: Sensors
subject: DDC 570 / Life sciences
subject: DDC 540 / Chemistry & allied sciences

description: The use of 3D-printing technology for producing optical devices (i.e., mirrors and waveguides) remains challenging, especially in the UV spectral regime. Gas sensors based on absorbance measurements in the UV region are suitable for determining numerous volatile species in a variety of samples and analytical scenarios. The performance of absorbance-based gas sensors is dependent on the ability of the gas cell to propagate radiation across the absorption path length and facilitate interaction between photons and analytes. In this technical note, we present a 3D-printed substrate-integrated hollow waveguide (iHWG) to be used as a miniaturized and ultralightweight gas cell used in UV gas-sensing schemes. The substrates were fabricated via UV stereolithography and polished, and the light-guiding channel was coated with aluminum for UV reflectivity. This procedure resulted in a surface roughness of 11.2 nm for the reflective coating, yielding a radiation attenuation of 2.25 W/cm2. The 3D-printed iHWG was coupled to a UV light source and a portable USB-connected spectrometer. The sensing device was applied for the quantification of isoprene and acetone, serving as a proof-of-concept study. Detection limits of 0.22 and 0.03% in air were obtained for acetone and isoprene, respectively, with a nearly instantaneous sensor response. The development of portable, low-cost, and ultralightweight UV optical sensors enables their use in a wide range of scenarios ranging from environmental monitoring to clinical/medical applications.
Additional file 1 of Comparative Effectiveness of Multiple Exercise Interventions in the Treatment of Mental Health Disorders: A Systematic Review and Network Meta-Analysis
Creators: name: Yu, Qian
name: Wong, Ka-Kit
name: Lei, On-Kei
name: Nie, Jinlei
name: Shi, Qingde
name: Zou, Liye
name: Kong, Zhaowei
Publisher: name: figshare
Year: 2022
Subjects: Medicine
Biotechnology
Cancer
Science Policy
Mental Health

description: Additional file 1: Appendix Outline.
Influence of photospheric magnetic conditions on the catastrophic behaviors of flux ropes in active regions
Creators: name: Zhang, Quanhao
name: Wang, Yuming
name: Hu, Youqiu
name: Liu, Rui
name: Liu, Jiajia
Publisher: name: arXiv
Year: 2017
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: Since only the magnetic conditions at the photosphere can be routinely observed in current observations, it is of great significance to find out the influences of photospheric magnetic conditions on solar eruptive activities. Previous studies about catastrophe indicated that the magnetic system consisting of a flux rope in a partially open bipolar field is subject to catastrophe, but not if the bipolar field is completely closed under the same specified photospheric conditions. In order to investigate the influence of the photospheric magnetic conditions on the catastrophic behavior of this system, we expand upon the 2.5 dimensional ideal magnetohydrodynamic (MHD) model in Cartesian coordinates to simulate the evolution of the equilibrium states of the system under different photospheric flux distributions. Our simulation results reveal that a catastrophe occurs only when the photospheric flux is not concentrated too much toward the polarity inversion line and the source regions of the bipolar field are not too weak; otherwise no catastrophe occurs. As a result, under certain photospheric conditions, a catastrophe could take place in a completely closed configuration whereas it ceases to exist in a partially open configuration. This indicates that whether the background field is completely closed or partially open is not the only necessary condition for the existence of catastrophe, and that the photospheric conditions also play a crucial role in the catastrophic behavior of the flux rope system.
description: This paper has been accepted by the Astrophysical Journal
A critical study of the elastic properties and stability of Heusler compounds: Phase change and tetragonal $X_{2}YZ$ compounds
Creators: name: Wu, Shu-Chun
name: Naghavi, S. Shahab
name: Fecher, Gerhard H.
name: Felser, Claudia
Publisher: name: arXiv
Year: 2017
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: In the present work, the elastic constants and derived properties of tetragonal and cubic Heusler compounds were calculated using the high accuracy of the full-potential linearized augmented plane wave (FPLAPW). To find the criteria required for an accurate calculation, the consequences of increasing the numbers of $k$-points and plane waves on the convergence of the calculated elastic constants were explored. Once accurate elastic constants were calculated, elastic anisotropies, sound velocities, Debye temperatures, malleability, and other measurable physical properties were determined for the studied systems. The elastic properties suggested metallic bonding with intermediate malleability, between brittle and ductile, for the studied Heusler compounds. To address the effect of off-stoichiometry on the mechanical properties, the virtual crystal approximation (VCA) was used to calculate the elastic constants. The results indicated that an extreme correlation exists between the anisotropy ratio and the stoichiometry of the Heusler compounds, especially in the case of Ni$_{2}$MnGa.
title: ADCO, Cartulaire général de Cîteaux, dit de Jean de Cirey, (XVe siècle), tome III, Cart. 187 (11 H 72), f. 0037r
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: cartulaire
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: Cartulaire général de Cîteaux, dit de Jean de Cirey, (XVe siècle), tome III, Archives départementales de la Côte-d'Or, Cart. 187 (11 H 72), f. 0037r, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire général de Cîteaux, dit de Jean de Cirey, (XVe siècle), tome III, Archives départementales de la Côte-d'Or, Cart. 187 (11 H 72), f. 0037r, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
Mining the Relationship Between COVID-19 Sentiment and Market Performance
Creators: name: Xia, Ziyuan
name: Chen, Jeffery
name: Sun, Anchen
Publisher: name: arXiv
Year: 2021
Subjects: subject: General Economics (econ.GN)
subject: Statistical Finance (q-fin.ST)
subject: FOS: Economics and business

description: At the beginning of the COVID-19 outbreak in March, we observed one of the largest stock market crashes in history. Within the months following this, a volatile bullish climb back to pre-pandemic performances and higher. In this paper, we study the stock market behavior during the initial few months of the COVID-19 pandemic in relation to COVID-19 sentiment. Using text sentiment analysis of Twitter data, we look at tweets that contain key words in relation to the COVID-19 pandemic and the sentiment of the tweet to understand whether sentiment can be used as an indicator for stock market performance. There has been previous research done on applying natural language processing and text sentiment analysis to understand the stock market performance, given how prevalent the impact of COVID-19 is to the economy, we want to further the application of these techniques to understand the relationship that COVID-19 has with stock market performance. Our findings show that there is a strong relationship to COVID-19 sentiment derived from tweets that could be used to predict stock market performance in the future.
description: 18 pages, 7 figures, 5 tables
Charging of highly resistive granular metal films
Creators: name: Orihuela, M. F.
name: Ortuno, M.
name: Somoza, A. M.
name: Colchero, J.
name: Palacios-Lidón, E.
name: Grenet, T.
name: Delahaye, J.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We have used the Scanning Kelvin probe microscopy technique to monitor the charging process of highly resistive granular thin films. The sample is connected to two leads and is separated by an insulator layer from a gate electrode. When a gate voltage is applied, charges enter from the leads and rearrange across the sample. We find very slow processes with characteristic charging times exponentially distributed over a wide range of values, resulting in a logarithmic relaxation to equilibrium. After the gate voltage has been switched off, the system again relaxes logarithmically slowly to the new equilibrium. The results cannot be explained with diffusion models, but most of them can be understood with a hopping percolation model, in which the localization length is shorter than the typical site separation. The technique is very promising for the study of slow phenomena in highly resistive systems and will be able to estimate the conductance of these systems when direct macroscopic measurement techniques are not sensitive enough.
description: 8 pages, 7 figures
MOESM1 of Computational analysis of envelope glycoproteins from diverse geographical isolates of bovine leukemia virus identifies highly conserved peptide motifs
Creators: name: Pluta, Aneta
name: Albritton, Lorraine
name: Rola-Łuszczak, Marzena
name: Kuźmak, Jacek
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Additional file 1: Table S1. Accession numbers and country or region of origin of the sequences analyzed in the study. §—direct submission to GenBank.
Transient ionization potential depression in nonthermal dense plasmas at high x-ray intensity
Creators: name: Jin, Rui
name: Abdullah, Malik Muhammad
name: Jurek, Zoltan
name: Santra, Robin
name: Son, Sang-Kil
Publisher: name: arXiv
Year: 2021
Subjects: subject: Plasma Physics (physics.plasm-ph)
subject: Atomic Physics (physics.atom-ph)
subject: FOS: Physical sciences

description: The advent of x-ray free-electron lasers (XFELs), which provide intense ultrashort x-ray pulses, has brought a new way of creating and analyzing hot and warm dense plasmas in the laboratory. Because of the ultrashort pulse duration, the XFEL-produced plasma will be out of equilibrium at the beginning and even the electronic subsystem may not reach thermal equilibrium while interacting with a femtosecond time-scale pulse. In the dense plasma, the ionization potential depression (IPD) induced by the plasma environment plays a crucial role for understanding and modeling microscopic dynamical processes. However, all theoretical approaches for IPD have been based on local thermal equilibrium (LTE) and it has been controversial to use LTE IPD models for the nonthermal situation. In this work, we propose a non-LTE (NLTE) approach to calculate the IPD effect by combining a quantum-mechanical electronic-structure calculation and a classical molecular dynamics simulation. This hybrid approach enables us to investigate the time evolution of ionization potentials and IPDs during and after the interaction with XFEL pulses, without the limitation of the LTE assumption. In our NLTE approach, the transient IPD values are presented as distributions evolving with time, which cannot be captured by conventional LTE-based models. The time-integrated ionization potential values are in good agreement with benchmark experimental data on solid-density aluminum plasma and other theoretical predictions based on LTE. The present work is promising to provide critical insights into nonequilibrium dynamics of dense plasma formation and thermalization induced by XFEL pulses.
description: 26 pages, 9 figures
Remote redundancy ;: artificial reliability in a remote camera device
Creators: name: Pidgeon, Joshua
Publisher: name: Macquarie University
Year: 2022
Subjects: Other education not elsewhere classified

description: A self-supervised redundancy system has been developed for open-source microcontrollers, to tolerate hardware faults, and to recover from software faults. This device is intended to enable reliable deployment in rural and difficult access situations. An exclusion lock is used to prevent additional microcontrollers from simultaneously controlling the system. Watchdog timers provide resetting capability, to enable error recovery. The implementation of this system into a camera monitoring device was not completed, because of clashes in the intialisation of the modules.
Terrestrial Planet Formation: Constraining the Formation of Mercury
Creators: name: Lykawka, Patryk Sofia
name: Ito, Takashi
Publisher: name: arXiv
Year: 2017
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: The formation of the four terrestrial planets of the solar system is one of the most fundamental problems in the planetary sciences. However, the formation of Mercury remains poorly understood. We investigated terrestrial planet formation by performing 110 high-resolution N-body simulation runs using more than 100 embryos and 6000 disk planetesimals representing a primordial protoplanetary disk. To investigate the formation of Mercury, these simulations considered an inner region of the disk at 0.2-0.5 au (the Mercury region) and disks with and without mass enhancements beyond the ice line location, aIL, in the disk, where aIL = 1.5, 2.25, and 3.0 au were tested. Although Venus and Earth analogs (considering both orbits and masses) successfully formed in the majority of the runs, Mercury analogs were obtained in only nine runs. Mars analogs were also similarly scarce. Our Mercury analogs concentrated at orbits with a ~ 0.27-0.34 au, relatively small eccentricities/inclinations, and median mass m ~ 0.2 Earth masses. In addition, we found that our Mercury analogs acquired most of their final masses from embryos/planetesimals initially located between 0.2 and ~1-1.5 au within 10 Myr, while the remaining mass came from a wider region up to ~3 au at later times. Although the ice line was negligible in the formation of planets located in the Mercury region, it enriched all terrestrial planets with water. Indeed, Mercury analogs showed a wide range of water mass fractions at the end of terrestrial planet formation.
description: 21 pages, 5 figures, 4 tables. Accepted for publication in The Astrophysical Journal
Black-box Adversarial Attacks on Monocular Depth Estimation Using Evolutionary Multi-objective Optimization
Creators: name: Daimo, Renya
name: Ono, Satoshi
name: Suzuki, Takahiro
Publisher: name: arXiv
Year: 2021
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences
subject: I.2.10; I.2.m

description: This paper proposes an adversarial attack method to deep neural networks (DNNs) for monocular depth estimation, i.e., estimating the depth from a single image. Single image depth estimation has improved drastically in recent years due to the development of DNNs. However, vulnerabilities of DNNs for image classification have been revealed by adversarial attacks, and DNNs for monocular depth estimation could contain similar vulnerabilities. Therefore, research on vulnerabilities of DNNs for monocular depth estimation has spread rapidly, but many of them assume white-box conditions where inside information of DNNs is available, or are transferability-based black-box attacks that require a substitute DNN model and a training dataset. Utilizing Evolutionary Multi-objective Optimization, the proposed method in this paper analyzes DNNs under the black-box condition where only output depth maps are available. In addition, the proposed method does not require a substitute DNN that has a similar architecture to the target DNN nor any knowledge about training data used to train the target model. Experimental results showed that the proposed method succeeded in attacking two DNN-based methods that were trained with indoor and outdoor scenes respectively.
Additional file 3: of Birthplace choices: what are the information needs of women when choosing where to give birth in England? A qualitative study using online and face to face focus groups
Creators: name: Hinton, Lisa
name: Dumelow, Carol
name: Rowe, Rachel
name: Hollowell, Jennifer
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: Computational Biology

description: NVIVO codes used for analysis. (DOCX 20Â kb)
The nature, extent and age of the lower crust and underlying subcontinental lithospheric mantle (SCLM) beneath the Siberian Craton (Russia)
Creators: name: Tretiakova, Irina G.
Publisher: name: Macquarie University
Year: 2022
Subjects: Other education not elsewhere classified

description: The lower continental crust and subcontinental lithospheric mantle (SCLM) are very interesting and important part of the Earth planet that has influenced significantly processes, which are continually altering surface of the Earth. Knowledge of the nature, structure and evolution of these layers may lead to understanding of the deep Earth’s processes. The Siberian craton is one of a few regions where samples of lower crust and underlying subcontinental lithospheric mantle can be found. Many geological and geophysical studies were carried out in this region but the role of crust and SCLM in the Earth’s evolution is not completely understood yet. Modern analytical techniques allow solving problems that were outstanding up to now. For example, isotopic and trace-element studies on zircon can specify not only the age of rock but also the source of melts and thus identify different stages in the craton evolution. The Siberian craton has experienced widespread Phanerozoic kimberlite magmatism. Besides diamonds, kimberlites also carry up a unique set of xenogenic material (xenoliths and xenocrysts) derived from depths of the lithosphere-asthenosphere transition zone (230-250 km) to the upper crust. Thus, kimberlitic pipes are natural drill holes, supplying with upper-mantle and crustal xenoliths and allowing us to investigate and reconstruct the structure of the deeper sections of the lithosphere. More than 1000 zircon grains from five terranes (Magan, Markha, Daldyn, Khapchan and Birekta) of the Siberian craton were analysed for U-Pb ages, trace-element characteristics, hafnium and oxygen isotopes composition. These data were supplemented by Re-Os isotope information collected on sulphide inclusion in silicate minerals from the mantle xenoliths. This combined isotopic information show that there were several events that involved both reworking of older crust and some addition of mantle-derived material. Moreover, integration of U-Pb age and Hf-isotopic data for zircons from different terranes indicates that the main magmatic-tectonic events are coeval for all studied terranes. For kimberlitic fields located within the Magan and Markha terranes the results of U-Pb and model ages show a good agreement with previous data. However, the ages from the eastern part of the craton (Khapchanand Birekta terranes) are much older than those reported previously. This implies that the amalgamation of the Siberian craton happened much earlier than it was previously suggested,which might have a significant impact on the diamond-bearing potential of the eastern part of the craton.
Additional file 2: Figure S2. of Unique, dual-indexed sequencing adapters with UMIs effectively eliminate index cross-talk and significantly improve sensitivity of massively parallel sequencing
Creators: name: MacConaill, Laura
name: Burns, Robert
name: Anwesha Nag
name: Coleman, Haley
name: Slevin, Michael
name: Giorda, Kristina
name: Light, Madelyn
name: Lai, Kevin
name: Jarosz, Mirna
name: McNeill, Matthew
name: Ducar, Matthew
name: Meyerson, Matthew
name: Thorner, Aaron
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified

description: Standard sample indexing and library construction. (a) Plate layout of standard combinatorial indexed adapters. A total of 20 different adapters are used to create 96 unique indices, such that the i5 and i7 sequences are different in each plate well. All wells in a single column share the same i7 index. All wells in a single row share the same i5 index. Prior to library construction, i5 and i7 adapter oligonucleotides are annealed to create Y-adapters. (b) During standard library preparation, Y-adapters are ligated to sheared, end repaired, A-tailed, genomic DNA. Combinatorial indices are depicted in this image. (PDF 868 kb)
Heterologous production of isopropanol using metabolically engineered acetobacterium woodii strains
Creators: name: Höfele, Franziska
name: Schoch, Teresa Patrizia
name: Oberlies, Catarina
name: Dürre, Peter
Publisher: name: Universität Ulm
Year: 2023
Subjects: subject: Acetogens
subject: Acetobacterium woodii
subject: Anaerobic fermentation
subject: Wood–Ljungdahl pathway
subject: Solvents
subject: Isopropanol
subject: Metabolic engineering
subject: DDC 570 / Life sciences

description: The depletion of fossil fuel resources and the CO2 emissions coupled with petroleum-based industrial processes present a relevant issue for the whole of society. An alternative to the fossil-based production of chemicals is microbial fermentation using acetogens. Acetogenic bacteria are able to metabolize CO or CO2 (+H2) via the Wood–Ljungdahl pathway. As isopropanol is widely used in a variety of industrial branches, it is advantageous to find a fossil-independent production process. In this study, Acetobacterium woodii was employed to produce isopropanol via plasmid-based expression of the enzymes thiolase A, CoA-transferase, acetoacetate decarboxylase and secondary alcohol dehydrogenase. An examination of the enzymes originating from different organisms led to a maximum isopropanol production of 5.64 ± 1.08 mM using CO2 + H2 as the carbon and energy source. To this end, the genes thlA (encoding thiolase A) and ctfA/ctfB (encoding CoA-transferase) of Clostridium scatologenes, adc (encoding acetoacetate decarboxylase) originating from C. acetobutylicum and sadH (encoding secondary alcohol dehydrogenase) of C. beijerinckii DSM 6423 were employed. Since bottlenecks in the isopropanol production pathway are known, optimization of the strain was investigated, resulting in a 2.5-fold increase in isopropanol concentration.
Additional file 2: of Birthplace choices: what are the information needs of women when choosing where to give birth in England? A qualitative study using online and face to face focus groups
Creators: name: Hinton, Lisa
name: Dumelow, Carol
name: Rowe, Rachel
name: Hollowell, Jennifer
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: Computational Biology

description: Characteristics of focus groups participants. (DOCX 25Â kb)
Social cognition and relational aggression: an investigation of the cognitive bases of preschoolers' aggressive behaviour
Creators: name: Swit, Cara S.
Publisher: name: Macquarie University
Year: 2022
Subjects: Other education not elsewhere classified

description: Young children’s social cognitive understanding of aggression and reasons for engaging in aggressive behaviour are often overlooked in aggression research. It is often assumed that preschool age children do not have the cognitive capacity to explain or justify their behaviour and there remains a paucity of appropriate measures of young children’s social cognitive understanding of aggression. The aim of this study was to address preschool age children’s use of relational aggression and the social cognitive processes that may underlie these behaviours through the development of a ‘preschooler-friendly’ measure with a view to understanding the reasons why children engage in aggression, as well as children’s normative beliefs about, and behavioural responses to, relational and physical provocation. The study also assessed teacher and parent normative beliefs about, and intervention responses for different types of aggression to determine the relationship between children’s cognitive processing and ecological factors. This study aimed to extend research by examining the socio-psychological factors of relationally and physically aggressive children in an Australian sample. A representative sample of preschool age children (N = 68) participated in this study, yielding two subgroups compromising highly relationally aggressive (n = 9) and typically developing (n = 7) children. The identification of two subgroups allowed for differences in relationally aggressive and typically developing children’s social cognitive processing to be examined. This study found that relational aggression was viewed as more acceptable by teachers and parents compared to physical aggression and these normative beliefs were accompanied by more passive intervention strategies in response to relational aggression. Relational and physical aggression predicted both functionally adaptive and maladaptive socio-psychological factors in this sample of preschool age children. The newly developed measure was able to identify differences in the social cognitive explanations and responses to provocation of relationally aggressive and typically developing children. Highly relationally aggressive children were more likely to recommend prosocial problem solving responses and have higher quality social interactions with peers and adults, whereas typically developing children recommended typical aggressive responses to provocation. The significance of these results for understanding the development of aggression and implications for early school based interventions are discussed.
Categorical computation
Creators: name: Kong, Liang
name: Zheng, Hao
Publisher: name: arXiv
Year: 2021
Subjects: subject: Quantum Physics (quant-ph)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Category Theory (math.CT)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: In quantum computing, the computation is achieved by linear operators in or between Hilbert spaces. In this work, we explore a new computation scheme, in which the linear operators in quantum computing are replaced by (higher) functors between two (higher) categories. If from Turing computing to quantum computing is the first quantization of computation, then this new scheme can be viewed as the second quantization of computation. The fundamental problem in realizing this idea is how to realize a (higher) functor physically. We provide a theoretical idea of realizing (higher) functors physically based on the physics of topological orders.
description: 11 pages, comments are welcome
Quantifying and modelling the responses of leaf gas exchange to drought
Creators: name: Zhou, Shuangxi
Publisher: name: Macquarie University
Year: 2022
Subjects: Other education not elsewhere classified

description: Global climate change is expected to increase drought duration and intensity in certain regions while increasing rainfall in others. The quantitative consequences of increased drought for ecosystems are not easy to predict. Process-based models must be informed by experiments to determine the resilience of plants and ecosystems from different climates. The thesis provides quantitative information aimed at improving land surface models (LSMs). It includes four papers. (1) Responses of leaf-atmosphere gas exchange to short-term drought were analysed, across plant functional types and climates, based on a synthesis of previous experiments. Explicit and consistent definitions of stomatal versus non-stomatal responses were adopted. Both types of response were shown to be important, and plants adapted to arid climates responded very differently from others. (2) Parallel responses of stomatal conductance, mesophyll conductance, and photosynthetic capacity were found in two glasshouse experiments with tree species from Australia and Europe, revealing a common,coordinated pattern of increasing tolerance in plants from drier environments. (3) Xeric and riparian species of Eucalyptus were subjected to short- and long-term drought. The species were found to differ not only in their tolerance for short-term drought, but also in the extent to which they could acclimate to long-term drought. (4) Experimentally based drought responses were used to define new, plant type-dependent relationships of stomatal sensitivity and photosynthetic capacity to soil water potential in the Community Atmosphere Biosphere LandExchange (CABLE) LSM. Comparison with CO2 and latent heat flux measurements from eddy covariance flux measurement sites in Europe during the 'heatwave' year of 2003 showed that discrepancies between model results and observations were not substantially improved by the inclusion of the more realistic functions, due to a persistent positive bias in the model's simulation of evapotranspiration which overshadowed the differences between different representations of drought response functions.
Electronic structure and magnetic properties of the strong-rung spin-1 ladder compound Rb$_3$Ni$_2$(NO$_3$)$_7$
Creators: name: Pchelkina, Z. V.
name: Mazurenko, V. V.
name: Volkova, O. S.
name: Deeva, E. B.
name: Morozov, I. V.
name: Troyanov, S. I.
name: Werner, J.
name: Koo, C.
name: Klingeler, R.
name: Vasiliev, A. N.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: Small single crystals of Rb$_3$Ni$_2$(NO$_3$)$_7$ were obtained by crystallization from anhydrous nitric acid solution of rubidium nitrate and nickel nitrate hexahydrate. The basic elements of the crystal structure of this new compound are isolated spin-1 two-leg ladders of Ni$^{2+}$-ions connected by (NO$_3$)$^-$ groups. The experimental data show the absence of long range magnetic order at T $\geq 2$~K. LDA+U calculations and the detailed analysis of the experimental data, i.e. of the magnetic susceptibility, the specific heat in magnetic fields up to 9~T, the magnetization, and of the high-frequency electron spin resonance data, enable quantitative estimates of the relevant parameters of the $S=1$ ladders in Rb$_3$Ni$_2$(NO$_3$)$_7$ . The rung-coupling $J_1 = 10.5$~K, the leg-coupling $J_2=1.6$~K, and the uniaxial anisotropy $|A| = 179$~GHz are obtained. The scenario of spin liquid quantum ground state is further corroborated by quantum Monte Carlo simulations of the magnetic susceptibility.
description: 10 pages, 11 figures
Additional file 10 of Scoring model based on the signature of non-m6A-related neoantigen-coding lncRNAs assists in immune microenvironment analysis and TCR-neoantigen pair selection in gliomas
Creators: name: Zhao, Wenbo
name: Wu, Yibo
name: Zhao, Feihu
name: Xue, Zhiyi
name: Liu, Wenyu
name: Cao, Zenxin
name: Zhao, Zhimin
name: Huang, Bin
name: Han, Mingzhi
name: Li, Xingang
Publisher: name: figshare
Year: 2022
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 10: Fig. S10. Intercellular communication analysis of single cell RNA-seq based on CGGA scSeq dataset. A, B Top 30 interactions between cells in low (A) or high (B) NAS groups, respectively. C The interaction ratios between T cells and four kinds of glioma cells in single cell RNA-seq of low or high neoantigen score groups. D-F The expression of IFNGR1 (D), JAK1 (E) and JAK2 (F) in four kinds of glioma cells. G The correlations between expression of IFNGR1, JAK1, JAK2 and neoantigen activation scores in glioma cells.
Additional file 11 of Scoring model based on the signature of non-m6A-related neoantigen-coding lncRNAs assists in immune microenvironment analysis and TCR-neoantigen pair selection in gliomas
Creators: name: Zhao, Wenbo
name: Wu, Yibo
name: Zhao, Feihu
name: Xue, Zhiyi
name: Liu, Wenyu
name: Cao, Zenxin
name: Zhao, Zhimin
name: Huang, Bin
name: Han, Mingzhi
name: Li, Xingang
Publisher: name: figshare
Year: 2022
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 11: Fig. S11. The details in TCR clonotype analysis of GSE188620 (scTCR data). A The amount and percent of unique TCR clonotypes in four patients before and after vaccination. B The number of unique TCR clonotypes with different abundances in four patients before and after vaccination. C The length distribution of TCR clonotypes displayed by the numbers of CDR3 amino acids in different kinds of CDR3 length. Total clonotypes or clonotypes in α, β chains are shown. D The clonal diversity of TCR clonotypes in total or every sample before and after vaccination. E The NAS in RNA-seq data of unvaccinated or vaccinated gliomas.
Fractional Skellam Process of Order $k$
Creators: name: Kataria, K. K.
name: Khandakar, M.
Publisher: name: arXiv
Year: 2021
Subjects: subject: Probability (math.PR)
subject: FOS: Mathematics
subject: 60G22, 60G55

description: We introduce and study a fractional version of the Skellam process of order $k$ by time-changing it with an independent inverse stable subordinator. We call it the fractional Skellam process of order $k$ (FSPoK). An integral representation for its one-dimensional distributions and their governing system of fractional differential equations are obtained. We derive the probability generating function, mean, variance and covariance of the FSPoK which are utilized to establish its long-range dependence property. Later, we considered two time-changed versions of the FSPoK. These are obtained by time-changing the FSPoK by an independent Lévy subordinator and its inverse. Some distributional properties and particular cases are discussed for these time-changed processes.
title: ADCO, Cartulaire de Cîteaux pour les possessions de Chaugey et Maison-Dieu (Fin XVe siècle), Cart. 180 (11 H 755), 83 folios, f. 0009
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2017
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: cartulaire

description: Cartulaire de Cîteaux pour les possessions de Chaugey et Maison-Dieu (Fin XVe siècle), Archives départementales de la Côte-d'Or, Cart. 180 (11 H 755), 83 folios, f. 0009, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire de Cîteaux pour les possessions de Chaugey et Maison-Dieu (Fin XVe siècle), Archives départementales de la Côte-d'Or, Cart. 180 (11 H 755), 83 folios, f. 0009, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
An Exploration of Business Librarian Participation in Knowledge Synthesis Reviews
Creators: name: Splenda, Ryan
name: Young, Sarah
name: Premji, Zahra
Publisher: name: Carnegie Mellon University
Year: 2022
Subjects: subject: Library and Information Studies
subject: FOS: Media and communications

description: Systematic reviews and other forms of knowledge synthesis are increasingly common in the social sciences, including in business and management research. We surveyed academic business librarians to determine the extent of their involvement, in any capacity, in knowledge synthesis. Of 71 eligible responses, 30 percent were involved in supporting knowledge synthesis, while others expressed an awareness of and interest in knowledge synthesis methods and have participated in training opportunities to support these types of projects in the future. While still nascent, knowledge synthesis support by business librarians presents potential as a new service area providing opportunities for deep engagement with faculty research.
Additional file 1 of Vaginal delivery in women with COVID-19: report of two cases
Creators: name: Cao, Dongmei
name: Chen, Miaomiao
name: Peng, Min
name: Yin, Heng
name: Sun, Guoqiang
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Cell Biology
subject: Biotechnology
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 1. Interpretation of nucleic acid for SARS-CoV-2 combined with serum specific IgM and IgG antibodies.
Health economic modelling of oncology therapies
Creators: name: KIM, HANSOO
Publisher: name: Monash University
Year: 2022
Subjects: subject: 140208 Health Economics
subject: FOS: Economics and business

description: The treatment of cancer has evolved from non-specific chemotherapy to immune checkpoint inhibitors. The costs of newer treatments are high and access is challenging for payers as there are many uncertainties relating to efficacy, safety and benefits to patients’ quality of life. Health technology assessment incorporating health economic modelling is pivotal for managing the financial risks of oncology treatments, but better methods are needed to ensure timely access to appropriate new oncology therapies. This work highlights the key issues pertaining to health economic modelling and offers potential solutions.
Additional file 1: Table S1. of Clinical and pathological factors influencing survival in a large cohort of triple-negative breast cancer patients
Creators: name: Urru, Silvana
name: Gallus, Silvano
name: Bosetti, Cristina
name: Moi, Tiziana
name: Medda, Ricardo
name: Sollai, Elisabetta
name: Murgia, Alma
name: Sanges, Francesca
name: Pira, Giovanna
name: Manca, Alessandra
name: Palmas, Dolores
name: Floris, Matteo
name: Asunis, Anna
name: Atzori, Francesco
name: Carru, Ciriaco
name: DâIncalci, Maurizio
name: Ghiani, Massimo
name: Marras, Vincenzo
name: Onnis, Daniela
name: Santona, Maria
name: Sarobba, Giuseppina
name: Valle, Enrichetta
name: Canu, Luisa
name: Cossu, Sergio
name: Bulfone, Alessandro
name: Rocca, Paolo
name: Miglio, Maria De
name: OrrĂš, Sandra
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Hematology

description: Hazard ratios (HRs) of recurrence, and corresponding 95% confidence intervals (CIs), according to selected clinical and pathological characteristics, among 825 triple-negative breast cancers (TNBCs). Sardinia, Italy 1994-2015. Table S2. Hazard ratios (HRs) of recurrence, and corresponding 95% confidence intervals (CIs), according to pathological lymph nodes and lymph node ratio among 311 triple-negative breast cancers (TNBCs) with positive lymph nodes. Sardinia, Italy 1994-2015. Figure S1. Kaplan-Meir curves for disease-free survival according to tumor stage among 825 triple-negative breast cancer patients. Sardinia, Italy 1994â 2005. Figure S2. Kaplan-Meir curves for disease-free survival according to pathological lymph nodes stage (a) and lymph node ratio (b) among 311 triple-negative breast cancer patients with positive lymph nodes. Sardinia, Italy 1994â 2005 (DOC 658 kb)
Enhancing our understanding of rapidly internationalising professional service firms: an exploration of post-entry internationalisation strategies
Creators: name: Zadeh, Amir Chiti
Publisher: name: Macquarie University
Year: 2022
Subjects: Other education not elsewhere classified

description: Rapidly internationalising firms represent a growing phenomenon in advanced nations, whose economies are increasingly service based. There has been much research on initial internationalisation of manufacturing based firms, within the ‘international new venture’/‘born global’ literature, yet the rapid internationalisation of professional service firms or their post entry internationalisation stage remains under-explored. This study focuses on the post entry internationalisation processes of rapidly internationalising firms. Using a qualitativecase study approach, the drivers, market selection and entry mode of four professional service firms in their post entry internationalisation are explored. Using an interpretive research paradigm, the findings reveal that these firms initially rely on networks and reputation to internationalise, but are forced to reduce their pace of internationalisation and deinternationalise in their post entry stage due to loss of reputation within the international market and gaining stronger network within the home market. The research extends the body of literature for both rapidly internationalising firms and professional service firms by exploring three key phases of firm internationalisation and their drivers, exploring key drivers of internationalisation in the initial phase of internationalisation and post entry stage of internationalisation. As part of the initial rapid internationalisation phase, each firm advances their network and knowledge of the international environment, before entering the deceleration phase where firms reduce their pace of internationalisation prior to entering the de-internationalisation phase where firms take advantage of stronger home networks. This research will build on the insights and new knowledge found for links between internationalisation phases present in this research and will further benefit professional service firms that are looking to internationalise rapidly.