Agriculture Product Types Ontology (APTO)
Creators: name: Miranda Soares, Filipi
name: Ferreira Pires, Luís
name: Olavo Bonino da Silva Santos, Luiz
name: Corrêa, Fernando Elias
name: de Abreu Moreira, Dilvan
name: Pignatari Drucker, Debora
name: Braghetto, Kelly Rosa
name: Botazzo Delbem, Alexandre Cláudio
name: Mauro Saraiva, Antonio
Publisher: name: Zenodo
Year: 2025

description:  

--Updates in version 1.31: editions in the ontology metadata for improving FAIRness.

--This is a copy of the normative document for the Agriculture Product Types Ontology (APTO) for citation only. For recent discussions, as well as suggesting updates, please refer to the GitHub repo. APTO is an ontology of types, meaning it does not contain individuals and is intended as a classification system for agricultural commodities price index databases in Brazil.



Distributions






Normative document in HTML




apto.owl





Services for browsing the ontology:






Text search (search entities by labels and comments)




Virtuoso (query the ontology using SPARQL)


Agroportal






Normative Namespaces





Prefix
Namespace IRI




apto
https://w3id.org/APTO#


ro
http://purl.obolibrary.org/obo/RO_


bco
http://purl.obolibrary.org/obo/BCO_


owl
http://www.w3.org/2002/07/owl#


rdf
http://www.w3.org/1999/02/22-rdf-syntax-ns#


sdo
https://schema.org/


xml
http://www.w3.org/XML/1998/namespace


xsd
http://www.w3.org/2001/XMLSchema#


gbif
https://www.gbif.org/species/


rdfs
http://www.w3.org/2000/01/rdf-schema#


skos
http://www.w3.org/2004/02/skos/core#


agrovoc
http://aims.fao.org/aos/agrovoc/


agrotermos
https://sistemas.sede.embrapa.br/agrotermos/resources/




 

This ontology contains labels and comments in both Portuguese and English. There are two main modules: :Organism and :Product_type.




:Organism Module


The :Organism class contains subclasses that represent the taxonomy of species related to the production of given product types. It imports taxonomic information from the Global Biodiversity Information Facility (GBIF) Backbone Taxonomy via API.



:Product_type Module


The :Product_type class has six main subclasses organized into major groups:



:Inorganic_compound

:Animal_product

:Plant_product

:Raw_product

:Processed_product

:By-product


The :Animal_product and :Plant_product classes include subclasses indicating the type of processing the product has undergone. These subclasses are also children of :Raw_product, :Processed_product, and :By-product.



Object Properties


APTO defines nine object properties:



:has_ingredient and :is_ingredient_of (inverse properties): Indicate that a product type is used in the manufacturing of a processed product type (e.g., :Cow_cheese :has_ingredient :Cow_milk).

:derives_from and :derives_in (inverse properties, imported from the Relations Ontology (RO)): Indicate that a product type originates from another product type (e.g., :Cocoa_almond :derives_from :Cocoa).

:member_of_taxon (imported from the Biological Collections Ontology (BCO)): Indicates that an organismal entity belongs to a taxon (e.g., :Pacu :member_of_taxon :Piaractus_mesopotamicus).

:produced_by and :produces (inverse properties, imported from RO): Indicate that an organismal entity produces a given type of product. For example, :Assai :produced_by :Assai_palm, and :Assai_palm :member_of_taxon :Euterpe_oleracea. If only the final product is listed in commodity databases and the rest of the organism holds no commercial value, the product is linked directly to the taxon (e.g., :Pineapple :produced_by :Ananas_comosus).

:residue_of: Indicates that a by-product is the residue of manufacturing another product (e.g., :Whey :residue_of :Cheese).

:is_a_hybrid_of: Specific to the :Organism subclasses, indicating a hybrid of two species (e.g., :Citrus_aurantium :is_a_hybrid_of ( :Citrus_reticulata and :Citrus_maxima )).




Data and Annotation Properties


APTO does not include any data properties. Default annotation properties from OWL and RDF are used, with SKOS vocabulary imported to indicate alternative labels for the classes.



Availability and Licensing


APTO is available both in a user-friendly browser and as an OWL file.