cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
A Review on Quantitative Models for Sustainable Food Logistics Management
Creators: name: Soysal, Mehmet
name: Bloemhof-Ruwaard, Jacqueline.M.
name: Meuwissen, Miranda P.M.
name: Van Der Vorst, Jack G.A.J.
name: Soysal, Mehmet
name: Bloemhof-Ruwaard, Jacqueline.M.
name: Meuwissen, Miranda P.M.
name: Van Der Vorst, Jack G.A.J.
Publisher: name: Unknown
Year: 2012
Subjects: subject: Agribusiness
subject: Environmental Economics and Policy
subject: Food Consumption/Nutrition/Food Safety
subject: Industrial Organization
subject: Institutional and Behavioral Economics
subject: Research Methods/ Statistical Methods
subject: Food logistics management
subject: Sustainability
subject: Quantitative models
subject: Key performance indicators
subject: Literature review

description: The last two decades food logistics systems have seen the transition from a focus on traditional supply chain management to food supply chain management, and successively, to sustainable food supply chain management. The main aim of this study is to identify key logistical aims in these three phases and analyse currently available quantitative models to point out modelling challenges in sustainable food logistics management (SFLM). A literature review on quantitative studies is conducted and also qualitative studies are consulted to understand the key logistical aims more clearly and to identify relevant system scope issues. Results show that research on SFLM has been progressively developing according to the needs of the food industry. However, the intrinsic characteristics of food products and processes have not yet been handled properly in the identified studies. The majority of the works reviewed have not contemplated on sustainability problems, apart from a few recent studies. Therefore, the study concludes that new and advanced quantitative models are needed that take specific SFLM requirements from practice into consideration to support business decisions and capture food supply chain dynamics
Shopping in Malaysia: A Study of International Tourists Experience and Expectation
Creators: name: Azila Azmi
name: Amin, Mohamad
name: Abdullah, Azrul
name: Shaw, Gareth
Publisher: name: figshare
Year: 2020
Subjects: subject: 150604 Tourism Marketing
subject: FOS: Economics and business
subject: 159999 Commerce, Management, Tourism and Services not elsewhere classified
subject: 150699 Tourism not elsewhere classified
subject: 140216 Tourism Economics

description: The globalisation of tourism as a major activity has produced increasing demands for new tourist experiences including an increasing importance of shopping. As part of this trend tourists have a growing interest in enjoying shopping particularly for luxury items in major retail complexes or purpose built shopping malls. Increasingly this link between tourism and retailing is becoming important as a competitive advantage in the international competition of different global tourism destinations. However, few detailed studies have been directed at such experiences as part of the global tourism regime. This qualitative study sought to explore shopping experiences among international tourist in Malaysian shopping malls. In-depth semi structured interviews were conducted with international tourists visiting several states in Malaysia. The international tourists were interviewed using a mall intercept survey in major shopping complexes in around Malaysia. They were asked to describe their shopping experiences as well as their expectation of visiting the mall. Their experiences and expectations provide a perspective on how international tourists perceive the nature of such shopping experiences. The data were analysed using content analysis. The findings disclose the item suggested for quantitative analysis relating to the shopping experiences of international tourists. This study can be beneficial for mall retailers in capitalizing on the international tourist market by meeting their needs.
天津肿瘤医院IMPC冰冻组织样本
Creators: name: 曹, 博洋
Publisher: name: CNGB
Year: 2021
Subjects: Genome sequencing
Exome
Transcriptome or Gene expression
Multiisolate
Medical

description: 研究来自天津肿瘤医院IMPC乳腺癌的冰冻组织样本WES和WGS等多组学数据
Additional file 1 of Developing a toolkit for increasing the participation of black, Asian and minority ethnic communities in health and social care research
Creators: name: Farooqi, Azhar
name: Jutlla, Karan
name: Raghavan, Raghu
name: Wilson, Andrew
name: Uddin, Mohammud Shams
name: Akroyd, Carol
name: Patel, Naina
name: Campbell-Morris, Pamela Peggy
name: Farooqi, Aaisha Tasneem
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Marine Biology
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1.
Genome research of pancreatic neuroendocrine tumors
Creators: name: 吴文铭(Wenming Wu)
Publisher: name: CNGB
Year: 2019
Subjects: Genome sequencing and assembly
Multiisolate

description: Insulinomas and non-functional pancreatic neuroendocrine tumours are two main types of pancreatic neuroendocrine tumours. A total of 120 pancreatic neuroendocrine tumours from Asian population were sequenced.
Rossodes pilakai Gibon 2013, n. sp.
Creators: name: Gibon, François-Marie
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Trichoptera
Philopotamidae
Rossodes
Rossodes pilakai

description: Rossodes pilakai n. sp.
(Fig. 2 E-H)
 MATÉRIEL TYPE. — Holotype: Madagascar, Fenoevo, 15.IV.1992, J.-M. Elouard, 1 ♂ (MNHN). Paratype: Imonty sur l’Imonty (Bassin du Mandrare), 46°43’18”E, 24°49’03”S, 22.V.1994, F.-M. Gibon, 1 ♂ (CBGP). — Réserve d’Andohahela, sur l’Ambahibe (Bassin de la Efaho), 46°51’09”E, 24°45’07”S, 17.V.1994, F.-M. Gibon, 1 ♂ (CBGP).
AUTRE MATÉRIEL EXAMINÉ. — Camp 2 du WWF, dans la réserve d’Andohahela, sur l’Andranohela (Bassin de la Manampanihy), 46°44’25”E, 24°35’47”S, 2.XI.1995, J.-M. Elouard, 1 ♂ (CBGP).
LOCALITÉ TYPE. — Madagascar, près de Fenoevo, sur un tributaire de la Manampanihy, 46°53’39”E, 24’41’00”S.
DISTRIBUTION. — La distribution connue se limite au massif d’Andohahela, au sud-est de Madagascar (Fig. 10).
ÉTYMOLOGIE. — Cette espèce est dédiée à Théogène Pilaka, qui travaillait au LRSAE sur les Simuliidae malgaches.
 DIAGNOSE. — Rossodes pilakai n. sp. et R. mantadia n. sp. sont les seules espèces à présenter à la fois un neuvième tergite distinct et indépendant du dixième et l’extrémité des appendices supérieurs arrondie en vue dorsale. Rossodes pilakai n. sp. se distingue par la présence d’un rétrécissement accentué de l’élément central du dixième tergite (Fig. 2G). Elle est également caractérisée par l’élargissement de la partie distale de l’appareil phallique (Fig. 2F). On notera, de plus, la présence de cinq paires d’épines internes à l’appareil phallique alors qu’elles sont six chez R. mantadia n. sp.
DESCRIPTION
Taille. Aile antérieure: 0,56 cm, aile postérieure: de 0,49 à 0,50 cm.
Genitalia mâles. Bord proximal du neuvième segment abdominal arrondi, convexe, profondément invaginé dans le huitième. Neuvième tergite réduit mais présent, sclérifié et distinct du dixième. Appendices inférieurs: structure caractéristique du genre, bords dorso-externes déformés en un lobe spiniforme courbé vers l’intérieur. Appendices supérieurs, apparaissant sur la vue dorsale comme de courtes projections latéro-distales digitiformes de la base du dixième tergite, munis d’une petite excroissance latérale bulbeuse; en vue latérale: forme grossièrement triangulaire, extrémité distale spiniforme. Dixième tergite composé de deux petits éléments latéraux (fusionnés avec les appendices supérieurs) et d’un grand élément central massif à l’extrémité distale arrondie; il porte de nombreuses sensilles distales, une ligne latérale de sensillae ainsi que trois soies. Appareil phallique muni d’un sclérite phallotrémal et de cinq paires d’épines internes, deux d’entre elles légèrement plus allongées et nettement élargies en forme de bâtonnet.
description: Published as part of Gibon, François-Marie, 2013, Une sous-famille caractÉristique des forÊts humides primaires malgaches: les Rossodinae (Trichoptera, Philopotamidae), pp. 151-174 in Zoosystema 35 (2) on page 156, DOI: 10.5252/z2013n2a2, http://zenodo.org/record/5159987
A model finding a new Richardson potential with different scales for confinement and asymptotic freedom, by fitting the properties of ${\D}^{++}$ and ${\Om}^{-}$
Creators: name: Bagchi, Manjari
name: Dey, Mira
name: Daw, Sukanta
name: Dey, Jishnu
Publisher: name: arXiv
Year: 2004
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Phenomenological Richardson potential has built in asymptotic freedom (AF in short) and confinement, with only one parameter $\La$ in the potential. But it is known that the scales of AF and confinement are not the same. In the present work a relativistic mean field calculation for baryons is tried out with two parameters $\La$ and $\La^\prime$ for AF and confinement respectively .To test the two parameter potential we calculate the energies and the magnetic moments, of the triple u - quark system (${\D}^{++}$) and the triple s - quark system (${\Om}^{-}$) and found good values for $\La=100 MeV$ and $\La^\prime ~= 350 MeV$. So we believe that the modified Richardson potential should have AF scale $\La ~= 100 MeV$ and the confinement scale $\La^\prime ~= 350 MeV$.
description: Accepted for publication in Nuclear Physics A
A New Dual System For The Fundamental Units, including and going beyond the newly revised SI
Creators: name: Fayet, Pierre
Publisher: name: arXiv
Year: 2019
Subjects: subject: General Physics (physics.gen-ph)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We propose a new system for the fundamental units, which includes and goes beyond the present redefinition of the SI, by choosing also $c=\hbar=1$. By fixing $c=c_\circ $m/s = 1, $\hbar=\hbar_\circ $ Js = 1 and $\underline{μ_\circ}=μ_\circ $N/A$^2$ = 1, it allows us to define the metre, the joule, and the ampere as equal to (1/299 792 458) s, $(1/\hbar_\circ = .948 ... \times \ 10^{34})\ {\rm s}^{-1}$ and $\sqrt{μ_\circ \rm N}= \sqrt{μ_\circ c_\circ / \hbar_\circ}\ {\rm s}^{-1}= 1.890...\times 10^{18}\ {\rm s}^{-1}$. It presents at the same time the advantages and elegance of a system with $\hbar = c = \underline{μ_\circ} = \underline{ε_\circ } = k = N_A = 1\,$, where the vacuum magnetic permeability, electric permittivity, and impedance are all equal to 1. All units are rescaled from the natural ones and proportional to the s, s$^{-1}$, s$^{-2}$, ... or just 1, as for the coulomb, ohm and weber, now dimensionless. The coulomb is equal to $\sqrt{μ_\circ c_\circ / \hbar_\circ}= 1.890... \times 10^{18}$, and the elementary charge to $e=1.602...\times 10^{-19} {\rm C} = \sqrt{4πα}=.3028... $ . The ohm is equal to $1/μ_\circ c_\circ$ so that the impedance of the vacuum is $Z_\circ = 376.730... Ω=1$. The volt is $ 1/ \sqrt{μ_\circ c_\circ \hbar_\circ}\ {\rm s}^{-1} = 5.017... \times\ 10^{15}\ {\rm s}^{-1}$, and the tesla $c_\circ $V/m = $ \sqrt{{c_\circ^3}/{μ_\circ\hbar_\circ}}\ {\rm s}^{-2} = 4.509... \times 10^{32}\ {\rm s}^{-2}$. The weber is $ 1/ \sqrt{μ_\circ c_\circ \hbar_\circ} = 5.017... \times\ 10^{15}$. $\ K_J =483\,597. \ $... GHz/V $= e/π= $ .09639..., and $R_K = 25\,812.\ ...\ Ω=1/2α\simeq 68.518$. One can also fix $e$ = 1.602 176 634 $\times 10^{-19}$ C, at the price of adjusting the coulomb and all electrical units with $μ_\circ=4π\times 10^{-7}η^2$ where $η^2, \propto α$, is very close to 1.
description: 26 pages, 2 tables
Mutation analyses of patients with dyschromatosis symmetrica hereditaria
Creators: name: wei, xiu
Publisher: name: CNGB
Year: 2021
Subjects: Phenotype or Genotype
Monoisolate
Medical

description: Dyschromatosis symmetrica hereditaria (DSH) is an autosomal dominantly inherited pigmented skin disorder caused by mutations of adenosine deaminase acting on RNA1(ADAR1) gene, which encodes a double-stranded RNA-specific adenosine deaminase.
Additional file 1 of Impact of urbanization on morbidity of hepatitis A: a national panel study in China during 2005–2018
Creators: name: Ming, Bo-Wen
name: Yang, Zhou
name: Yan, Ze-Lin
name: Shi, Chen
name: Xu, Xiao-Han
name: Li, Li
name: Ou, Chun-Quan
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology

description: Additional file 1: Table S1. Diagnostic criteria for viral hepatitis A in Chinese mainland. Table S2. Summary statistics for the annual reported hepatitis A in Chinese mainland in 2005–2018. Table S3. The Global Moran’s I index for the average annual morbidity of hepatitis A in Chinese mainland during 2005–2018. Table S4. The Spearman correlation between the morbidity of hepatitis A, urbanization-related indices and meteorological factors. Table S5. The univariable analyses of the effects of each urbanization-related index and meteorological factor on the annual morbidity of hepatitis A. Table S6. The variance inflammation factor for checking multicollinearity in the main model. Table S7. Summary statistics for the annual reported hepatitis A in children and adults in Chinese mainland during 2005–2018. Table S8. The effects of urbanization-related indices on the annual morbidity of hepatitis A after excluding the data of Tibet. Table S9. The effects of urbanization-related indices including the urbanization rate instead of GDP per capita on the annual morbidity of hepatitis A. Fig. S1. The average annual hepatitis A morbidity in the PLADs of Chinese mainland. a The morbidity during 2005–2018; b The morbidity during 2005–2007; c The morbidity during 2012–2018. Fig. S2. The average annual urbanization-related indices for each PLAD in Chinese mainland during 2005–2018. a The GDP per capita; b The illiteracy rate; c The tap water coverage; d The number of hospitalization beds; e The population density. Fig. S3. The average annual morbidity of hepatitis A in children and adults for the PLADs in Chinese mainland during 2005–2018. a The morbidity in children; b The morbidity in adults. Fig. S4. The exposure–response relationship between the morbidity of hepatitis A and each urbanization-related index. Solid lines indicate the point estimates of relative riskof hepatitis A morbidity across values of the six continuous independent variables as compared with 0. The light-blue areas represent the corresponding 95% confidence intervals.
Dipolar interaction effects in the thermally activated magnetic relaxation of two-dimensional nanoparticle ensembles
Creators: name: Denisov, S. I.
name: Lyutyy, T. V.
name: Trohidou, K. N.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Condensed Matter (cond-mat)
subject: FOS: Physical sciences

description: The thermally activated magnetic relaxation in two-dimensional ensembles of dipolar interacting nanoparticles with large uniaxial perpendicular anisotropy is studied by a numerical method and within the mean-field approximation. The role that the correlation effects in the presence of a bias magnetic field and taking into account the lattice structure play in magnetic relaxation is revealed
description: 10 pages, 3 figures
Additional file 2 of Developing a toolkit for increasing the participation of black, Asian and minority ethnic communities in health and social care research
Creators: name: Farooqi, Azhar
name: Jutlla, Karan
name: Raghavan, Raghu
name: Wilson, Andrew
name: Uddin, Mohammud Shams
name: Akroyd, Carol
name: Patel, Naina
name: Campbell-Morris, Pamela Peggy
name: Farooqi, Aaisha Tasneem
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Marine Biology
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 2.
Electromagnetic vacuum fluctuations, Casimir and Van der Waals forces
Creators: name: Genet, Cyriaque
name: Intravaia, Francesco
name: Lambrecht, Astrid
name: Reynaud, Serge
Publisher: name: arXiv
Year: 2003
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Electromagnetic vacuum fluctuations have observable consequences, like the Casimir force between mirrors in vacuum. This force is now measured with good accuracy and agreement with theory when the effect of imperfect reflection of mirrors is properly taken into account. We discuss the simple case of bulk metallic mirrors described by a plasma model and show that simple scaling laws are obtained at the limits of long and short distances. The crossover between the short and long-distance laws is quite similar to the crossover between Van der Waals and Casimir-Polder forces for two atoms in vacuum. The result obtained at short distances can be understood as the London interaction between plasmon excitations at the surface of each bulk mirror.
description: 8 pages, 1 figure, final version
Spin-1/2 $XX$ chain in a transverse field with regularly alternating $g$-factors: Static and dynamic properties
Creators: name: Krokhmalskii, Taras
name: Verkholyak, Taras
name: Baran, Ostap
name: Ohanyan, Vadim
name: Derzhko, Oleg
Publisher: name: arXiv
Year: 2020
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We consider the spin-1/2 isotropic $XY$ chain in an external magnetic field directed along $z$ axis with periodically varying $g$-factors. To reveal the effects of regularly alternating $g$-factors, we calculate various static and dynamic equilibrium quantities in the ground state and at finite temperatures. We demonstrate that because of the regularly alternating $g$-factors the saturation field may disappear and the field dependence of the susceptibility in the ground state has additional logarithmic singularity at zero field. Moreover, the zero-field susceptibility has a logarithmic singularity as $T\to 0$. Furthermore, the dynamic structure factors exhibit much more structure in the "wave vector -- frequency" plane that can be traced out to modifications of the two-fermion excitation continua which exclusively determine $S_{zz}(κ,ω)$ and dominate the properties of $S_{xx}(κ,ω)$. We discuss what changes can be observed in dynamic experiments on the corresponding substances.
An optimized 2-hour trypsin digestion protocol minimizes nonspecific tryptic cleavages and artificial modifications
Creators: name: 林, 志龙
Publisher: name: CNGB
Year: 2019
Subjects: Proteome
Other
大肠杆菌蛋白和HeLa细胞蛋白
蛋白质组学

description: 该论文研究数据表明蛋白质酶解的不同buffer、不同时长、蛋白酶比例、是否使用蛋白酶抑制剂等条件因素对蛋白质组鉴定的影响和效果，并得到了优化的酶解比例和时间，有助于提升蛋白质组学研究分析。
Additional file 3 of Developing a toolkit for increasing the participation of black, Asian and minority ethnic communities in health and social care research
Creators: name: Farooqi, Azhar
name: Jutlla, Karan
name: Raghavan, Raghu
name: Wilson, Andrew
name: Uddin, Mohammud Shams
name: Akroyd, Carol
name: Patel, Naina
name: Campbell-Morris, Pamela Peggy
name: Farooqi, Aaisha Tasneem
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Marine Biology
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 3.
Combining (Non-) Linear Optical and Fluorescence Analysis of DiD to Enhance Lipid Phase Recognition
Creators: name: Osella, Silvio
name: Di Meo, Florent
name: Murugan, N. Arul
name: Fabre, Gabin
name: Ameloot, Marcel
name: Trouillas, Patrick
name: Knippenberg, Stefan
Publisher: name: arXiv
Year: 2019
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Biological Physics (physics.bio-ph)
subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: The widespread interest in phase recognition of lipid membranes has led to the use of different optical techniques to enable differentiation of healthy and not fully functional cells. In this work, we show how the combination of different (non)linear optical methods such as One Photon Absorption (OPA), Two Photon Absorption (TPA) and Second Harmonic Generation (SHG) as well as the study of the fluorescence decay time leads to an enhanced screening of membrane phases using a fluorescent dioctadecyltetramethylindocarbocyanine (DiD) probe. In the current study we consider the pure liquid disordered phases of DOPC (room temperature) and DPPC (323 K), the solid gel phase of DPPC (298 K), and the liquid ordered phase of a 2:1 binary mixture of Sphingomyelin and Cholesterol. By means of extensive hybrid quantum mechanics molecular mechanics calculations and based upon the (non) linear absorption of the embedded probes, it is found that DiD can be used to identify the lipid bilayer phase. The joint TPA and SHG as well as fluorescence analyses qualifies DiD as versatile probe for phase recognition. In particular, the SHG data obtained by means of HyperRayleigh Scattering and by Electric Field Induced Second Harmonic Generation reveal differences in polarization of the probe in the different environments. The TPA results finally confirm the particular location of the probe in between the polar head group region of the 2:1 SM:Chol mixture in the liquid ordered phase.
description: 33 pages, 4 figures
Rossodes hertui Gibon 2013, n. sp.
Creators: name: Gibon, François-Marie
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Trichoptera
Philopotamidae
Rossodes
Rossodes hertui

description: Rossodes hertui n. sp.
(Fig. 3 A-D)
 MATÉRIEL TYPE. — Holotype: en aval du Camp base WWF, Parc national de la Montagne d’Ambre, 31.III.1995, J.-M. Elouard, 1 ♂ (MNHN).
 Paratype: mêmes localité et date que l’holotype, J.-M. Elouard, 1 ♂ (CBGP). — Aval du Camp base WWF, Parc national de la Montagne d’Ambre, rivière des Makis (Bassin de l’Antongombato), 49°10’21”E 12°31’38”S, 29.III.1994, J.-M. Elouard, 1 ♂ (CBGP). — Matsabory-Malio (Bassin de l’Antongombato), 49°09’36”E, 12°35’45”S, 03.V.1995, J.-M. Elouard, 2 ♂♂ (CBGP).
AUTRE MATÉRIEL EXAMINÉ. — Aval de la grande cascade, rivière des Makis (Bassin de l’Antongombato), 49°10’14”E 12°29’17”S, 2.IV.1994, 1 ♂ (CBGP).
LOCALITÉ TYPE. — Madagascar, Montagne d’Ambre, rivière des Makis (Bassin de l’Antongombato), 49°10’21”E 12°31’38”S.
DISTRIBUTION. — La distribution connue se limite à la Montagne d’Ambre (Fig. 10).
ÉTYMOLOGIE. — Cette espèce est dédiée à Olivier Hertu, informaticien au LRSAE.
 DIAGNOSE. — Rossodes hertui n. sp. et R. goodmani n. sp. sont les seules espèces à présenter à la fois un neuvième tergite distinct et indépendant du dixième et l’extrémité des appendices supérieurs pointue (vue dorsale). Elles se distinguent par la forme de l’extrémité du dixième tergite, arrondie chez R. hertui n. sp. (Fig. 3C), bifide chez R. goodmani n. sp. (Fig. 3G).
DESCRIPTION.
Taille. Aile antérieure: de 0,61 à 0,63 cm, aile postérieure: 0,55 cm.
Genitalia mâles. Bord antérieur du neuvième segment abdominal arrondi, convexe et profondément invaginé dans le huitième. Neuvième tergite réduit mais sclérifié et distinct du dixième. Appendices inférieurs: structure caractéristique du genre, bords dorso-externes déformés en un lobe spiniforme courbé vers l’intérieur. Appendices supérieurs, apparaissant dorsalement comme des projections latéro-distales spiniformes de la base du dixième tergite, munis d’une excroissance latérale bulbeuse; longueur légèrement supérieure à la moitié de celle du dixième tergite; en vue latérale: forme de poignard courbé dorsalement. Dixième tergite composé de deux petits éléments latéraux (fusionnés avec les appendices supérieurs) et d’un grand élément central massif à l’extrémité distale arrondie, il porte de nombreuses sensilles distales, une ligne latérale de sensilles et trois soies. Appareil phallique muni de cinq paires d’épines internes, trois d’entre elles plus fines et plus allongées.
description: Published as part of Gibon, François-Marie, 2013, Une sous-famille caractÉristique des forÊts humides primaires malgaches: les Rossodinae (Trichoptera, Philopotamidae), pp. 151-174 in Zoosystema 35 (2) on page 157, DOI: 10.5252/z2013n2a2, http://zenodo.org/record/5159987
The characteristic and diagnostic potential of T cell receptor repertoire in allergic disorder
Creators: name: Li, Xuemei
Publisher: name: CNGB
Year: 2019
Subjects: Other
TCR repertoire
Monoisolate

description: Allergic disorders are the most common immune related diseases worldwide, and its prevalence is growing dramatically in the last few decades, especially for pre-school kids. Although the interaction of the immune system with the environment is very critical in the sensitization of allergens. There is no direct data demonstrated how early-life environment exposure benefic the development of immune system. In this study, we investigated the T cell receptor beta chain (TCRB) repertoires of a large allergic cohort and compared them with that of healthy controls. The TCRB repertoire diversity decreased as aging. We found that the TCRB diversity of allergic kids was higher than that of healthy kids. In contrast to kids, the reversed trend was showed in allergic adults. We also found that the proportion of known pathogen specific (PKPS) TCRB increased with aging and peaked in 20 years; after 35 years old, it began to decrease, which agrees with the common sense that an individual has the best immunity in his 20-30s. The PKPS TCRB in allergic kids was significantly lower than that in healthy kids; however, for allergic adults, there is no difference was observed. Those results suggested that the diverse environment exposure during early-life is critical for the induction of immune tolerance, which can prevent the development of allergy. The expansion of allergen associated T cells reflected by the decreased TCRB diversity of allergic adults allows us to identify the allergen specific T cells, which can be used to help the diagnose of the allergic disorders.
GSH23.0-0.7+117, a neutral hydrogen shell in the inner Galaxy
Creators: name: Stil, J. M.
name: Taylor, A. R.
name: Martin, P. G.
name: Rothwell, T. A.
name: Dickey, J. M.
name: McClure-Griffiths, N. M.
Publisher: name: arXiv
Year: 2004
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: GSH23.0-0.7+117 is a well-defined neutral hydrogen shell discovered in the VLA Galactic Plane Survey (VGPS). Only the blueshifted side of the shell was detected. The expansion velocity and systemic velocity were determined through the systematic behavior of the HI emission with velocity. The center of the shell is at (l,b,v)=(23.05,-0.77,+117 km/s). The angular radius of the shell is 6.8', or 15 pc at a distance of 7.8 kpc. The HI mass divided by the volume of the half-shell implies an average density n_H = 11 +/- 4 cm^{-3} for the medium in which the shell expanded. The estimated age of GSH23.0-0.7+117 is 1 Myr, with an upper limit of 2 Myr. The modest expansion energy of 2 * 10^{48} erg can be provided by the stellar wind of a single O4 to O8 star over the age of the shell. The 3 sigma upper limit to the 1.4 GHz continuum flux density (S_{1.4} < 248 mJy) is used to derive an upper limit to the Lyman continuum luminosity generated inside the shell. This upper limit implies a maximum of one O9 star (O8 to O9.5 taking into account the error in the distance) inside the HI shell, unless most of the incident ionizing flux leaks through the HI shell. To allow this, the shell should be fragmented on scales smaller than the beam (2.3 pc). If the stellar wind bubble is not adiabatic, or the bubble has burst (as suggested by the HI channel maps), agreement between the energy and ionization requirements is even less likely. The limit set by the non-detection in the continuum provides a significant challenge for the interpretation of GSH23.0-0.7+117 as a stellar wind bubble. A similar analysis may be applicable to other Galactic HI shells that have not been detected in the continuum.
description: 18 pages, 6 figures. Figures 1 and 4 separately in GIF format. Accepted for publication in Astrophysical Journal
Genome-wide annotation, comparison and functional genomics of carbohydrate-active enzymes in legumes infecting Fusarium oxysporum formae speciales
Creators: name: Abhijeet Roy
name: Aiswarya Jayaprakash
name: T, Raja Rajeswary
name: A. Annamalai
name: PTV Lakshmi
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology

description: Fusarium wilt caused by soil borne ascomycetes fungi Fusarium oxysporum which has host-specific forms known as formae speciales (ff. spp.), apparently requires plant cell wall degrading enzymes (PCWDE) for successful invasion. In this study, 12 F. oxysporum ff. spp. were taken for genome-wide annotation and comparative analysis of CAZymes, with an assessment of secretory PCWDE and orthologues identification in the three legumes infecting ff. spp. Further, transcriptomic analysis in two legumes infecting ff. spp. using publically available data was also done. The comparative studies showed Glycoside hydrolase (GH) families to be abundant and Principle Component Analysis (PCA) formed two distinct clusters of ff. spp. based on the CAZymes modules and families. Nearly half of the CAZymes in the legumes infecting ff. spp. coded for signal peptides. The orthologue clusters of secretory CAZymes common in all the three legume infecting ff. spp. mostly belonged to families of AA9, GH28, CE5 and PL1 and the expression analysis revealed the abundant PCWDE were differentially expressed in these legumes infecting ff. spp. Therefore, this study gave an insight into the distribution of CAZymes especially extracellular PCWDE in legumes infecting ff. spp. with further shedding light onto some of the key PCWDE families through differential expression analysis.
Additional file 4 of Developing a toolkit for increasing the participation of black, Asian and minority ethnic communities in health and social care research
Creators: name: Farooqi, Azhar
name: Jutlla, Karan
name: Raghavan, Raghu
name: Wilson, Andrew
name: Uddin, Mohammud Shams
name: Akroyd, Carol
name: Patel, Naina
name: Campbell-Morris, Pamela Peggy
name: Farooqi, Aaisha Tasneem
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Marine Biology
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 4.
Synthesising digital twin travellers: Individual travel demand from aggregated mobile phone data
Creators: name: Anda, Cuauhtémoc
name: Ordonez Medina, Sergio Arturo
name: Axhausen, Kay W.
Publisher: name: ETH Zurich
Year: 2020
Subjects: Travel demand models
Mobile phone data
Generative models
Data privacy

description: Arbeitsberichte Verkehrs- und Raumplanung, 1559
Rossodes andohahela Gibon 2013, n. sp.
Creators: name: Gibon, François-Marie
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Trichoptera
Philopotamidae
Rossodes
Rossodes andohahela

description: Rossodes andohahela n. sp.
(Fig. 5 A-D)
 MATÉRIEL TYPE.— Holotype: Camp 1 du WWF, réserve nationale d’Andohahela, 25.XI.1995, J.-M. Elouard, 1 ♂ (MNHN).
 Paratype: Réserve nationale d’Andohahela, sur l’Ambahibe (Bassin de la Efaho, 46°51’09”E, 24°45’07”S), 17.V.1994, F.-M. Gibon, F. Ranaivoharindriaka, 1 ♂ (CBGP). — 46°51’07”E, 24°46’17”S, 18.05.1994, F.-M. Gibon, F. Ranaivoharindriaka, 1 ♂ (CBGP).
AUTRE MATÉRIEL EXAMINÉ. — Même localité et date que l’holotype, J.-M. Elouard, 1 ♂ (CBGP).
LOCALITÉ TYPE. — Madagascar, massif d’Andohahela, sur la rivière Andranohela (Bassin de la Manampanihy), 46°45’34”E, 24°36’43”S.
DISTRIBUTION. — Madagascar, massif d’Andohahela.
ÉTYMOLOGIE. — Massif d’Andohahela.
DIAGNOSE. —– La présence d’une projection latérale bifide de part et d’autre du lobe médian du dixième tergite empêche toute confusion avec une autre espèce. La disymétrie entre les deux paires d’épines internes à l’appareil phallique est une autre caractéristique remarquable de cette espèce.
DESCRIPTION
Taille. Aile antérieure: 0,55 cm, aile postérieure: 0,48 cm.
Genitalia mâles. Bord antérieur du neuvième sternite arrondi, convexe, invaginé dans le huitième. Neuvième tergite fusionné avec la base du dixième. Appendices inférieurs: structure caractéristique du genre, extrémité distale du bord dorso-latéral grossièrement arrondie.Appendices supérieurs insérés à la base du dixième tergite, allongés distalement (longueur à peine inférieure à celle du dixième tergite), élargis à l’extrémité en forme de massue, un ensemble de soies épaisses sur la partie distale. Dixième tergite grossièrement triangulaire (vue dorsale); au-dessus de chaque appendice supérieur: une projection latérale bifide et spiniforme; un groupe de sensillae distales. Appareil phallique muni d’un sclérite phallotrémal, d’une petite zone de spicules et deux paires d’épines internes, l’une (distale) de taille plus réduite que l’autre (moins du quart de la longueur).
description: Published as part of Gibon, François-Marie, 2013, Une sous-famille caractÉristique des forÊts humides primaires malgaches: les Rossodinae (Trichoptera, Philopotamidae), pp. 151-174 in Zoosystema 35 (2) on page 160, DOI: 10.5252/z2013n2a2, http://zenodo.org/record/5159987
BIM-based operational information requirements for asset owners
Creators: name: Munir, Mustapha
name: Kiviniemi, Arto
name: Jones, Stephen
name: Finnegan, Stephen
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Biophysics
subject: Space Science
subject: Cell Biology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: It is widely recognised in the Architecture, Engineering and Construction (AEC) industry that asset owners do not really understand their information needs for effective BIM-based Asset Management (AM). Hence, they may be unable to develop their operational information requirements to request the right data from the design and construction phases. This paper investigates the operational information requirements of three asset owners through a comparative study. A qualitative multi-case study approach was used to collect and analyse the operational information requirements of three asset owners. A qualitative content analysis was also utilised to identify key asset information requirements and categories. The study revealed that operational information requirements are strongly related to business needs and that it is not possible to develop a rigid list of requirements for asset owners, but rather some templates to help them define their data requirements. Of a total of 172 analysed information requirements, only 7 requirements were common in all cases and 16 were common in 2 cases, which represents 4% and 9% of the total. The research addressed a significant research gap regarding the development of operational information requirements for asset owners. Moreover, the paper provides templates to help guide asset owners when defining their data requirements for asset operations in order to derive BIM business value.
Novel pipeline of high-frequency neoantigens heathy donor-based validation in breast cancer
Creators: name: 李, 冬丽
Publisher: name: CNGB
Year: 2019
Subjects: Variation
Multiisolate

description: 乳腺癌是女性最常见的肿瘤，其发病率和死亡率在女性常见肿瘤中均居于首位。即使近来的分子靶向药物，内分泌和多种疗法联合应用的治疗方法对早期乳腺癌起到了很大的作用。但是多数乳腺癌患者在被发现时已经是晚期。近年来，肿瘤免疫细胞治疗发展势头惊人。包括免疫检查点抑制剂PD1/PDL1，过继性免疫疗法CAR-T和个体化疫苗已经在多种癌症的临床应用中疗效显著。新生抗原作为肿瘤免疫细胞治疗的关键因素而被相关领域的研究者所关注和研究。但有效高频新生抗原的发现成为此种疗法的最大阻碍。在我们的这项研究中，我们的目标是能够通过一个高效的方法来识别乳腺癌高频新生抗原。我们利用生物信息技术挖掘数据库中大量乳腺癌测序数据，在注释错意突变的基础上预测乳腺癌新生抗原，并分离健康志愿者的CD8+T细胞在体外验证新生抗原的免疫原性。我们发现，来源于基因TWISTN的新抗原能够诱导特异性CTLs应答，对负载新抗原肽的靶细胞产生杀伤毒性，对野生型肽未产生交叉反应。因此，我们推断，利用这个方法可以快速识别乳腺癌或其他癌症大量新生抗原，建立多种肿瘤新生抗原库，发现癌症共享新生抗原，为肿瘤免疫细胞治疗提供研究基础。
Implementing version control with Git and GitHub as a learning objective in statistics and data science courses
Creators: name: Beckman, Matthew D.
name: Çetinkaya-Rundel, Mine
name: Horton, Nicholas J.
name: Rundel, Colin W.
name: Sullivan, Adam J.
name: Tackett, Maria
Publisher: name: arXiv
Year: 2020
Subjects: subject: Computation (stat.CO)
subject: Other Statistics (stat.OT)
subject: FOS: Computer and information sciences

description: A version control system records changes to a file or set of files over time so that changes can be tracked and specific versions of a file can be recalled later. As such, it is an essential element of a reproducible workflow that deserves due consideration among the learning objectives of statistics and data science courses. This paper describes experiences and implementation decisions of four contributing faculty who are teaching different courses at a variety of institutions. Each of these faculty have set version control as a learning objective and successfully integrated one such system (Git) into one or more statistics courses. The various approaches described in the paper span different implementation strategies to suit student background, course type, software choices, and assessment practices. By presenting a wide range of approaches to teaching Git, the paper aims to serve as a resource for statistics and data science instructors teaching courses at any level within an undergraduate or graduate curriculum.
description: In press, Journal of Statistics and Data Science Education
Off-axis electron holography and microstructure of Ba0.5Sr0.5TiO3 thin film grown on LaAlO3
Creators: name: Tian, H. F.
name: Yu, H. C.
name: Zhu, X. H.
name: Wang, Y. G.
name: Zheng, D. N.
name: Yang, H. X.
name: Li, J. Q.
Publisher: name: arXiv
Year: 2004
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: Epitaxial Ba0.5Sr0.5TiO3 thin films grown on the (001) LaAlO3 substrates with the ferroelectric transition of about 250K have been investigated by TEM and off-axis electron holography. Cross-sectional TEM observations show that the 350nm-thick Ba0.5Sr0.5TiO3 film has a sharp interface with notable misfit dislocations. Off-axis electron holographic measurements reveal that, at low temperatures, the ferroelectric polarization results in systematic accumulations of negative charges on the interface and positive charges on the film surface, and, at room temperature, certain charges could only accumulate at the interfacial dislocations and other defective areas.
description: 14 pages, 4figures, submitted to APL
Using discrete choice models to support strategic decision-making of air transportation service providers
Creators: name: van Eggermond, Michael A.B.
name: Axhausen, Kay W.
Publisher: name: ETH Zurich
Year: 2009
Subjects: info:eu-repo/classification/ddc/380
info:eu-repo/classification/ddc/330
info:eu-repo/classification/ddc/004
Commerce, communications, transport
Economics
Data processing, computer science

description: Arbeitsberichte Verkehrs- und Raumplanung, 546
Additional file 5 of Developing a toolkit for increasing the participation of black, Asian and minority ethnic communities in health and social care research
Creators: name: Farooqi, Azhar
name: Jutlla, Karan
name: Raghavan, Raghu
name: Wilson, Andrew
name: Uddin, Mohammud Shams
name: Akroyd, Carol
name: Patel, Naina
name: Campbell-Morris, Pamela Peggy
name: Farooqi, Aaisha Tasneem
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Marine Biology
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 5.
Genetic testing for Chinese hearing loss patients
Creators: name: guan, liping
Publisher: name: CNGB
Year: 2019
Subjects: Phenotype or Genotype
Variation
Monoisolate
Medical

description: We designed a gene panel containing over 100 deafness genes to assess the ratio of SNVs in known deafness genes contributing to the etiology of both sporadic and familial sensorineural hearing loss patients from China.
Raumnutzung in der Schweiz: Eine historische Raumstruktur-Datenbank
Creators: name: Tschopp, Martin
name: Keller, Peter
name: Axhausen, Kay W.
Publisher: name: ETH Zurich
Year: 2003
Subjects: subject: Raum
subject: Raumstruktur
subject: Demographie
subject: Schweiz
subject: ETH Zürich
subject: Institut für Verkehrsplanung und Transportsysteme (IVT)
subject: Space
subject: spatial structure
subject: Demography
subject: FOS: Sociology
subject: Switzerland
subject: ETH Zurich
subject: Institute for Traffic Planning and Systems (IVT)

description: Arbeitsberichte Verkehrs- und Raumplanung, 165
Ground state phase diagram of 2D electrons in high magnetic field
Creators: name: Shibata, Naokazu
name: Yoshioka, Daijiro
Publisher: name: arXiv
Year: 2003
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: The ground state phase diagram of two-dimensional electrons in high magnetic field is studied by the density matrix renormalization group (DMRG) method. The low energy excitations and pair correlation functions in Landau levels of N=0,1,2 are calculated for wide range of fillings. The obtained results for systems with up to 25 electrons confirm the existence of various electronic states in quantum Hall systems. The ground state phase diagram for N=0,1,2 consisting of incompressible liquids, compressible liquids, charge density waves called stripe, bubble and Wigner crystal is determined.
description: 4 pages, 7 figures, Proceedings of EP2DS-15, to appear in Physica E
采用高通量测序技术研究严重遗传性疾病致病机制研究
Creators: name: 管, 元宁
Publisher: name: CNGB
Year: 2019
Subjects: Raw sequence reads
Genome sequencing
Monoisolate

description: 严重遗传性疾病是指由于遗传因素先天形成，患者全部或部分丧失自主生活能力，后代再发风险高，医学上认为不宜生育的遗传性疾病。从指导婚育角度讲，可分为一下五种情况，致死性的严重遗传性疾病，迟发型严重遗传性疾病，慢性进行性的严重遗传性疾病，表现度不同的严重遗传性疾病，严重遗传性疾病的致病基因携带者，严重遗传病不仅降低人口素质，而且对人的健康造成极大影响。随着人类基因组计划的实现及分子遗传学技术日新月异的进展,目前二代基因测序技术已经广泛应用于遗传性疾病的诊疗中，二代基因测序技术可以定位相应致病基因与突变，从基因层面解释疾病发生机制。
Recent Experiments on the Casimir Effect: Description and Analysis
Creators: name: Lambrecht, Astrid
name: Reynaud, Serge
Publisher: name: arXiv
Year: 2003
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Contribution to the Seminaire Poincare, 2002
description: 8 pages, 5 figures
Targeted molecular proﬁling of genetic alterations of colorectal cancer using next-generation sequencing
Creators: name: 谭, 美华
Publisher: name: CNGB
Year: 2019
Subjects: Raw sequence reads
Monoisolate
Medical

description: Colorectal cancer (CRC) is a major contributor to cancer incidence and mortality in China and also remains a huge challenge to the world. Though the genetic basis of CRC has been well studied, little has been known regarding the uncommonly mutated genes, particularly in the CRC samples from Asian population. In this study, we performed targeted region sequencing on 22 CRC and 10 paired non-cancerous tissues to explore the genetic pattern of CRC samples among Chinese population. Totally 1335 reliable somatic mutations were identified. Mismatch-repair (MMR)-mutant patients showed significantly higher mutation density than MMR wide-type patients. MutSigCV, oncodriveFM and iCAGES simultaneously detected a total of 29 consensus unique driver genes and APC, SMAD4, NF1, ARID5B and NCOR1 were the top five most frequently mutated genes in colorectal cancer patients, the mutation rates were 68%, 36%, 36%, 32% and 27%, respectively. The discoveries in our study can contribute to the future studies in the diagnosis and oncogenesis of colorectal cancer.
The $D^0 - \bar D^0$ mass difference from a dispersion relation
Creators: name: Falk, Adam F.
name: Grossman, Yuval
name: Ligeti, Zoltan
name: Nir, Yosef
name: Petrov, Alexey A.
Publisher: name: arXiv
Year: 2004
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We study the Standard Model prediction for the mass difference between the two neutral D meson mass eigenstates, $Δm$. We derive a dispersion relation based on heavy quark effective theory that relates $Δm$ to an integral of the width difference of heavy mesons, $ΔΓ$, over varying values of the heavy meson mass. Modeling the $m_D$-dependence of certain D decay partial widths, we investigate the effects of SU(3) breaking from phase space on the mass difference. We find that $Δm$ may be comparable in magnitude to $ΔΓ$ in the Standard Model.
description: 16 pages
Rossodes ambreensis Gibon 2013, n. sp.
Creators: name: Gibon, François-Marie
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Trichoptera
Philopotamidae
Rossodes
Rossodes ambreensis

description: Rossodes ambreensis n. sp.
(Fig. 5 E-H)
 MATÉRIEL TYPE. — Holotype: Camp de base du WWF, Parc national de la Montagne d’Ambre, 3.IV.1995, J.-M. Elouard, 1 ♂ (MNHN).
 Paratypes: Même localité et date que l’holotype, 28.III.1994, J.-M. Elouard, 6 ♂♂ (CBGP).
AUTRE MATÉRIEL EXAMINÉ. — Une centaine de mètres en aval de la localité type, 49°10’21”E, 12°31’38”S, 2.IV.1994, J.-M. Elouard, 1 ♂ (CBGP). — En aval de la grande cascade, rivière des Makis (Bassin de l’Antongombato), 49°10’14”E, 12°29’17”S, 2.IV.1994, J.-M. Elouard, 1 ♂ (CBGP).
LOCALITÉ TYPE. — Madagascar, massif de la Montagne d’Ambre, rivière des Makis (Bassin de l’Antongombato), 49°10’09”E, 12°31’40”S.
DISTRIBUTION. — La distribution connue se limite au massif de la Montagne d’Ambre.
ÉTYMOLOGIE. — Cette espèce est nommée en référence au massif de la montagne d’Ambre.
 DIAGNOSE. — La forme du dixième tergite empêche toute confusion avec une autre espèce. Les deux expensions latérales du lobe médian sont caractéristiques; elles sont épaisses en vue latérale et digitiformes en vue dorsale, très différentes des déformations homologues présentes chez R. andohahela n. sp., qui sont minces, bifides et spiniformes.
DESCRIPTION
Taille. Aile antérieure: de 0,60 à 0,61 cm, aile postérieure: de 0,52 à 0,55 cm.
Genitalia mâles. Bord antérieur du neuvième sternite déformé et invaginé dans le huitième, en forme de triangle tronqué (vue latérale). Neuvième tergite fusionné avec la base du dixième. Appendices inférieurs: structure caractéristique du genre, extrémité distale du bord dorso-latéral grossièrement arrondie. Appendices supérieurs insérés à la base du dixième tergite, allongés distalement (longueur à peine inférieure à celle du dixième tergite), élargis à l’extrémité en forme de massue, un ensemble de soies épaisses sur la partie distale. Dixième tergite massif, forme grossièrement triangulaire (vue dorsale), une carène centrale saillante qui se divise en deux gros lobes latéraux terminés par une courte soie. Appareil phallique large et massif (vue latérale), un sclérite phallotrémal et quatre paires d’épines internes effilées et légèrement courbées.
description: Published as part of Gibon, François-Marie, 2013, Une sous-famille caractÉristique des forÊts humides primaires malgaches: les Rossodinae (Trichoptera, Philopotamidae), pp. 151-174 in Zoosystema 35 (2) on pages 160-162, DOI: 10.5252/z2013n2a2, http://zenodo.org/record/5159987