cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Multiplicative Thom-Sebastiani for Bernstein-Sato polynomials
Creators: name: Lee, Jonghyun
Publisher: name: arXiv
Year: 2024
Subjects: subject: Algebraic Geometry (math.AG)
subject: FOS: Mathematics
subject: 14F10 (Primary)

description: We show that if $f\in \mathcal{O}_X(X)$ and $g\in \mathcal{O}_Y(Y)$ are nonzero regular functions on smooth complex algebraic varieties $X$ and $Y$, then the Bernstein-Sato polynomial of the product function $fg \in \mathcal{O}_{X\times Y}(X \times Y)$ is given by $b_{fg}(s)=b_f(s)b_g(s)$, answering a question of Budur and Popa.
description: 12 pages; v4; minor revisions; final version, to appear in Journal of Algebra
Additional file 7 of LINC00649 underexpression is an adverse prognostic marker in acute myeloid leukemia
Creators: name: Guo, Chao
name: Ya-Yue Gao
name: Ju, Qian-Qian
name: Zhang, Chun-Xia
name: Gong, Ming
name: Li, Zhen-Ling
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Hematology

description: Additional file 7: Figure S3. pan-tissue correlation analysis of RBFOX2 and HOXA genes by R software (version 3.6.0). The X axis stands for -log10(p value), while the Y axis represent Pearson coefficients. The purple dots in the right upper quadrant represent normal tissue types, in which the correlation is significant and positive. The result in normal bone marrow was red dots and annotated by text.
When Text is Not Enough: The Processing of Text and Illustration for Emerging Medical Technologies
Creators: name: Huang, Qian
name: Peng, Wei
Publisher: name: Taylor & Francis
Year: 2022
Subjects: subject: Ecology
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy
subject: Mental Health

description: Text and illustration are two common communication modalities that are used to facilitate public understanding of new medical technologies. However, little is known about how to effectively use text and illustrations in pairs. The effects of using different types of text and illustrations have not been clearly understood. We conducted three studies to examine the effects of displaying text (non-narrative versus narrative) and illustrations (syntactic versus semantic) as a pair on a number of important outcomes. Study 1 showed that when displayed as a pair in juxtaposition, different pairs of text and illustration did not vary uncertainty or attitudes but varied fear. Study 2 found that when displayed in sequential order, different pairs of text and illustrations caused different levels of risk perceptions but their effects on fear were not different. Study 3 replicated Studies 2 with an increased sample size and found both main and interaction effects of text and illustration types. Theoretical and practical implications were discussed.
Additional file 1 of Handling informative dropout in longitudinal analysis of health-related quality of life: application of three approaches to data from the esophageal cancer clinical trial PRODIGE 5/ACCORD 17
Creators: name: Cuer, B.
name: C. Mollevi
name: A. Anota
name: E. Charton
name: B. Juzyna
name: T. Conroy
name: C. Touraine
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy

description: Additional file 1: Figure S1. Compliance in completing the EORTC QLQ-C30. Compliance in completing the entire questionnaire and for the four dimensions QL, PF, PA, and FA (ratio of the number of available questionnaires or scores to the number of expected questionnaires) at each HRQoL assessment visit (V) by treatment arm during radiochemotherapy (RT), chemotherapy (CT), and follow-up.
Quasiparticle scattering interference in cuprate superconductors
Creators: name: Zeng, Minghuan
name: Li, Xiang
name: Wang, Yongjun
name: Feng, Shiping
Publisher: name: arXiv
Year: 2024
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: The quasiparticle scattering interference (QSI) is intimately related to the nature of the quasiparticle and of its interplay with a variety of electronic orders and superconductivity. Here starting from the microscopic octet scattering model, the nature of QSI in cuprate superconductors is studied in the $T$-matrix approach. In particular, a new method of the inversion of matrix is developed to accurately derive the $T$-matrix for various kinds of impurities, and then the obtained $T$-matrix is employed to calculate the local density of states (LDOS). It is shown that the overall features of the LDOS modulation can be described qualitatively by taking into account the quasiparticle scattering from a single impurity on the kinetic-energy-driven homogeneous superconducting-state, where the QSI scattering wave vectors ${\bf q}_{i}$ and the related QSI peak dispersions are internally consistent within the octet scattering model. However, the pronounced QSI peaks in the momentum-space LDOS modulation pattern for a single impurity are smeared heavily in the case for multiple impurities, and then the momentum-space LDOS modulation for multiple impurities exhibits a speckle pattern. Moreover, the momentum-space LDOS modulation for Gaussian-random-distribution of on-site impurity at a relatively large deviation displays a similar behavior of the LDOS modulation for multiple impurities. The theory also indicates that the impurity weight linearly increases with the increase of the impurity-scattering strength for the weak scattering strength and tends to saturate in the strong scattering strength, while it decreases with the increase of the impurity-scattering screening length for the short screening-length and saturates in the long screening-length.
description: 21 pages, 12 figures, added figures, discussions, and references. Accepted for publication in Physical Review B
Additional file 1 of Medicinal plants used in managing diseases of the respiratory system among the Luo community: an appraisal of Kisumu East Sub-County, Kenya
Creators: name: Mailu, James Kiamba
name: Nguta, Joseph Mwanzia
name: Mbaria, James Mucunu
name: Okumu, Mitchel Otieno
Publisher: name: figshare
Year: 2020
Subjects: subject: Plant Biology
subject: FOS: Biological sciences

description: Additional file 1. Summary of the questionnaire used to interview herbalists in Kisumu East Sub County.
Room-temperature optically detected coherent control of molecular spins
Creators: name: Mena, Adrian
name: Mann, Sarah K.
name: Cowley-Semple, Angus
name: Bryan, Emma
name: Heutz, Sandrine
name: McCamey, Dane R.
name: Attwood, Max
name: Bayliss, Sam L.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Quantum Physics (quant-ph)
subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: Benefiting from both molecular tunability and versatile methods for deployment, optically interfaced molecular spins are a promising platform for quantum technologies such as sensing and imaging. Room-temperature optically detected coherent spin control is a key enabler for many applications, combining sensitive readout, versatile spin manipulation, and ambient operation. Here we demonstrate such functionality in a molecular spin system. Using the photoexcited triplet state of organic chromophores (pentacene doped in a para-terphenyl host), we optically detect coherent spin manipulation with photoluminescence contrasts exceeding 10% and microsecond coherence times at room temperature. We further demonstrate how coherent control of multiple triplet sublevels can significantly enhance optical spin contrast, and extend optically detected coherent control to a thermally evaporated thin film, retaining high photoluminescence contrast and coherence times of order one microsecond. These results open opportunities for room-temperature quantum technologies that can be systematically tailored through synthetic chemistry.
description: 9 pages, 4 figures
Online Differentially Private Synthetic Data Generation
Creators: name: He, Yiyun
name: Vershynin, Roman
name: Zhu, Yizhe
Publisher: name: arXiv
Year: 2024
Subjects: subject: Statistics Theory (math.ST)
subject: Data Structures and Algorithms (cs.DS)
subject: Machine Learning (cs.LG)
subject: Probability (math.PR)
subject: FOS: Mathematics
subject: FOS: Computer and information sciences

description: We present a polynomial-time algorithm for online differentially private synthetic data generation. For a data stream within the hypercube $[0,1]^d$ and an infinite time horizon, we develop an online algorithm that generates a differentially private synthetic dataset at each time $t$. This algorithm achieves a near-optimal accuracy bound of $O(\log(t)t^{-1/d})$ for $d\geq 2$ and $O(\log^{4.5}(t)t^{-1})$ for $d=1$ in the 1-Wasserstein distance. This result extends the previous work on the continual release model for counting queries to Lipschitz queries. Compared to the offline case, where the entire dataset is available at once, our approach requires only an extra polylog factor in the accuracy bound.
description: 21 pages
Additional file 1 of Clinical characteristics and associated factors of trigeminal neuralgia: experience from Addis Ababa, Ethiopia
Creators: name: Ayele, Biniyam Alemayehu
name: Abenet Tafesse Mengesha
name: Zewde, Yared Zenebe
Publisher: name: figshare
Year: 2020
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Biotechnology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1. Study questionnaire, semi-structured questionnaire prepared in order to extract the following data: socio-demographic, clinical characteristics, treatment type and dose, and treatment satisfaction.
Additional file 1 of Individual, institutional, and scientific environment factors associated with questionable research practices in the reporting of messages and conclusions in scientific health services research publications
Creators: name: Gerrits, Reinie G.
name: Mulyanto, Joko
name: Wammes, Joost D.
name: Berg, Michael J. Van Den
name: Klazinga, Niek S.
name: Kringos, Dionne S.
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Biotechnology
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1.
Additional file 5 of Individual, institutional, and scientific environment factors associated with questionable research practices in the reporting of messages and conclusions in scientific health services research publications
Creators: name: Gerrits, Reinie G.
name: Mulyanto, Joko
name: Wammes, Joost D.
name: Berg, Michael J. Van Den
name: Klazinga, Niek S.
name: Kringos, Dionne S.
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Biotechnology
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 5.
Performance-Complexity-Latency Trade-offs of Concatenated RS-BCH Codes
Creators: name: Sukmadji, Alvin Y.
name: Kschischang, Frank R.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Information Theory (cs.IT)
subject: FOS: Computer and information sciences

description: Using a generating function approach, a computationally tractable expression is derived to predict the frame error rate arising at the output of the binary symmetric channel when a number of outer Reed--Solomon codes are concatenated with a number of inner Bose--Ray-Chaudhuri--Hocquenghem codes, thereby obviating the need for time-consuming Monte Carlo simulations. Measuring (a) code performance via the gap to the Shannon limit, (b) decoding complexity via an estimate of the number of operations per decoded bit, and (c) decoding latency by the overall frame length, a code search is performed to determine the Pareto frontier for performance-complexity-latency trade-offs.
description: Accepted for publication in the IEEE Transactions on Communications
How does the brain work?
Creators: name: Wolfgang, Stegemann
Publisher: name: Zenodo
Year: 2025

description: Conventional explanations often look at the brain either from a purely physical perspective (as a complex network of electrical signals) or from a psychological perspective (as a site of mental processes). However, neither approach manages to completely bridge the gap between the physical structure of the brain and its mental functions.

In this article, we present an approach based on the concept of "polyvalence coupling" – a principle that could help to look at the mystery of brain function from a completely new perspective.
Additional file 2 of Individual, institutional, and scientific environment factors associated with questionable research practices in the reporting of messages and conclusions in scientific health services research publications
Creators: name: Gerrits, Reinie G.
name: Mulyanto, Joko
name: Wammes, Joost D.
name: Berg, Michael J. Van Den
name: Klazinga, Niek S.
name: Kringos, Dionne S.
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Biotechnology
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 2.
Additional file 4 of Individual, institutional, and scientific environment factors associated with questionable research practices in the reporting of messages and conclusions in scientific health services research publications
Creators: name: Gerrits, Reinie G.
name: Mulyanto, Joko
name: Wammes, Joost D.
name: Berg, Michael J. Van Den
name: Klazinga, Niek S.
name: Kringos, Dionne S.
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Biotechnology
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 4.
MOESM1 of Identification and characterization of genes frequently responsive to Xanthomonas oryzae pv. oryzae and Magnaporthe oryzae infections in rice
Creators: name: Kong, Weiwen
name: Ding, Li
name: Xia, Xue
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Physiology
subject: Environmental Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology
subject: Computational Biology

description: Additional file 1: Figure S1. The number of unique and common differentially expressed genes (DEGs) present in at least three pairs of rice samples infected by Xoo and Mor. (A) Up-regulated genes; (B) Down-regulated genes.
A Systematic Comparison of Contextualized Word Embeddings for Lexical Semantic Change
Creators: name: Periti, Francesco
name: Tahmasebi, Nina
Publisher: name: arXiv
Year: 2024
Subjects: subject: Computation and Language (cs.CL)
subject: FOS: Computer and information sciences

description: Contextualized embeddings are the preferred tool for modeling Lexical Semantic Change (LSC). Current evaluations typically focus on a specific task known as Graded Change Detection (GCD). However, performance comparison across work are often misleading due to their reliance on diverse settings. In this paper, we evaluate state-of-the-art models and approaches for GCD under equal conditions. We further break the LSC problem into Word-in-Context (WiC) and Word Sense Induction (WSI) tasks, and compare models across these different levels. Our evaluation is performed across different languages on eight available benchmarks for LSC, and shows that (i) APD outperforms other approaches for GCD; (ii) XL-LEXEME outperforms other contextualized models for WiC, WSI, and GCD, while being comparable to GPT-4; (iii) there is a clear need for improving the modeling of word meanings, as well as focus on how, when, and why these meanings change, rather than solely focusing on the extent of semantic change.
description: Submitted to NAACL 2024
Additional file 3 of Individual, institutional, and scientific environment factors associated with questionable research practices in the reporting of messages and conclusions in scientific health services research publications
Creators: name: Gerrits, Reinie G.
name: Mulyanto, Joko
name: Wammes, Joost D.
name: Berg, Michael J. Van Den
name: Klazinga, Niek S.
name: Kringos, Dionne S.
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Biotechnology
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 3.
MOESM1 of Genetic predisposition to type 2 diabetes is associated with severity of coronary artery disease in patients with acute coronary syndromes
Creators: name: Zheng, Qiwen
name: Jiang, Jie
name: Huo, Yong
name: Chen, Dafang
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Computational Biology

description: Additional file 1: Table S1. Criteria for diagnosis of STEMI, NSTEMI and UA. Table S2. Characteristics of 42 T2D SNPs and their associations with T2D (adjusted for age, sex and BMI). Table S3. The associations of severity of CAD in relation to unweighted GRS and GRS after excluding SNPs with pleiotropic effects. Figure S1. Distribution of the number of T2D risk increasing risk alleles (X-axis) and the percentage of T2D by the GRS. The columns and left Y-axis indicated the number of the participants according to different GRS; the dots and right Y-axis indicated the percentage of the T2D patients according to different GRS. Figure S2. Distribution of the number of T2D risk increasing risk alleles (X-axis) and the mean fasting glucose by the GRS. The columns and left Y-axis indicated the number of the participants according to different GRS; the dots and error bars indicated mean (Âąâ standard error) fasting glucose according to different GRS. Figure S3. Association of each T2D risk SNP and multi-vessel disease. Data were presented as OR and 95% CI. P values were calculated from logistic regression model with the severity of CAD as dependent variable and each SNP as independent variable in an additive genetic model after adjustment for age and sex. Figure S4. Regional association plots with association between rs1333049 and the severity of CAD. Associations of individual variants are plotted as -log10 P against chromosomal position. The right Y-axis shows the recombination rate estimated from the 1000 Genomes Project CHB and JPT data.
Additional file 3 of Cerebrospinal fluid findings in patients with myelin oligodendrocyte glycoprotein (MOG) antibodies. Part 1: Results from 163 lumbar punctures in 100 adult patients
Creators: name: Jarius, Sven
name: Pellkofer, Hannah
name: Siebert, Nadja
name: Korporal-Kuhnke, Mirjam
name: Hümmert, Martin W.
name: Ringelstein, Marius
name: Rommer, Paulus S.
name: Ayzenberg, Ilya
name: Ruprecht, Klemens
name: Klotz, Luisa
name: Asgari, Nasrin
name: Zrzavy, Tobias
name: Höftberger, Romana
name: Tobia, Rafik
name: Buttmann, Mathias
name: Fechner, Kai
name: Schanda, Kathrin
name: Weber, Martin
name: Asseyer, Susanna
name: Haas, Jürgen
name: Lechner, Christian
name: Kleiter, Ingo
name: Aktas, Orhan
name: Trebst, Corinna
name: Rostasy, Kevin
name: Reindl, Markus
name: Kümpfel, Tania
name: Paul, Friedemann
name: Wildemann, Brigitte
Publisher: name: figshare
Year: 2020
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 3: Supplementary Table 3. CSF findings in MOG-IgG-positive acute longitudinally extensive transverse myelitis (LETM) and MOG-IgG-positive non-longitudinally extensive transverse myelitis (NETM).
Additional file 2 of Cerebrospinal fluid findings in patients with myelin oligodendrocyte glycoprotein (MOG) antibodies. Part 1: Results from 163 lumbar punctures in 100 adult patients
Creators: name: Jarius, Sven
name: Pellkofer, Hannah
name: Siebert, Nadja
name: Korporal-Kuhnke, Mirjam
name: Hümmert, Martin W.
name: Ringelstein, Marius
name: Rommer, Paulus S.
name: Ayzenberg, Ilya
name: Ruprecht, Klemens
name: Klotz, Luisa
name: Asgari, Nasrin
name: Zrzavy, Tobias
name: Höftberger, Romana
name: Tobia, Rafik
name: Buttmann, Mathias
name: Fechner, Kai
name: Schanda, Kathrin
name: Weber, Martin
name: Asseyer, Susanna
name: Haas, Jürgen
name: Lechner, Christian
name: Kleiter, Ingo
name: Aktas, Orhan
name: Trebst, Corinna
name: Rostasy, Kevin
name: Reindl, Markus
name: Kümpfel, Tania
name: Paul, Friedemann
name: Wildemann, Brigitte
Publisher: name: figshare
Year: 2020
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 2: Supplementary Table 2. Variations in OCB positivity over time.
Additional file 7 of Cerebrospinal fluid findings in patients with myelin oligodendrocyte glycoprotein (MOG) antibodies. Part 1: Results from 163 lumbar punctures in 100 adult patients
Creators: name: Jarius, Sven
name: Pellkofer, Hannah
name: Siebert, Nadja
name: Korporal-Kuhnke, Mirjam
name: Hümmert, Martin W.
name: Ringelstein, Marius
name: Rommer, Paulus S.
name: Ayzenberg, Ilya
name: Ruprecht, Klemens
name: Klotz, Luisa
name: Asgari, Nasrin
name: Zrzavy, Tobias
name: Höftberger, Romana
name: Tobia, Rafik
name: Buttmann, Mathias
name: Fechner, Kai
name: Schanda, Kathrin
name: Weber, Martin
name: Asseyer, Susanna
name: Haas, Jürgen
name: Lechner, Christian
name: Kleiter, Ingo
name: Aktas, Orhan
name: Trebst, Corinna
name: Rostasy, Kevin
name: Reindl, Markus
name: Kümpfel, Tania
name: Paul, Friedemann
name: Wildemann, Brigitte
Publisher: name: figshare
Year: 2020
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 7: Supplementary Figure 3. Regression analysis of QAlb and CSF total protein demonstrated a close relationship between the two parameters (r2=0.75, p<0.00001).
Additional file 1 of Cerebrospinal fluid findings in patients with myelin oligodendrocyte glycoprotein (MOG) antibodies. Part 1: Results from 163 lumbar punctures in 100 adult patients
Creators: name: Jarius, Sven
name: Pellkofer, Hannah
name: Siebert, Nadja
name: Korporal-Kuhnke, Mirjam
name: Hümmert, Martin W.
name: Ringelstein, Marius
name: Rommer, Paulus S.
name: Ayzenberg, Ilya
name: Ruprecht, Klemens
name: Klotz, Luisa
name: Asgari, Nasrin
name: Zrzavy, Tobias
name: Höftberger, Romana
name: Tobia, Rafik
name: Buttmann, Mathias
name: Fechner, Kai
name: Schanda, Kathrin
name: Weber, Martin
name: Asseyer, Susanna
name: Haas, Jürgen
name: Lechner, Christian
name: Kleiter, Ingo
name: Aktas, Orhan
name: Trebst, Corinna
name: Rostasy, Kevin
name: Reindl, Markus
name: Kümpfel, Tania
name: Paul, Friedemann
name: Wildemann, Brigitte
Publisher: name: figshare
Year: 2020
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 1: Supplementary Table 1. CSF findings during acute attacks and during remission in the ‘acute MY subgroup’, the ‘acute ON subgroup’ and the ‘acute BRAIN subgroup’ (stratified results from Table 11).
Additional file 6 of Cerebrospinal fluid findings in patients with myelin oligodendrocyte glycoprotein (MOG) antibodies. Part 1: Results from 163 lumbar punctures in 100 adult patients
Creators: name: Jarius, Sven
name: Pellkofer, Hannah
name: Siebert, Nadja
name: Korporal-Kuhnke, Mirjam
name: Hümmert, Martin W.
name: Ringelstein, Marius
name: Rommer, Paulus S.
name: Ayzenberg, Ilya
name: Ruprecht, Klemens
name: Klotz, Luisa
name: Asgari, Nasrin
name: Zrzavy, Tobias
name: Höftberger, Romana
name: Tobia, Rafik
name: Buttmann, Mathias
name: Fechner, Kai
name: Schanda, Kathrin
name: Weber, Martin
name: Asseyer, Susanna
name: Haas, Jürgen
name: Lechner, Christian
name: Kleiter, Ingo
name: Aktas, Orhan
name: Trebst, Corinna
name: Rostasy, Kevin
name: Reindl, Markus
name: Kümpfel, Tania
name: Paul, Friedemann
name: Wildemann, Brigitte
Publisher: name: figshare
Year: 2020
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 6: Supplementary Figure 2. No statistically significant differences in serum IgG, IgM, IgA and albumin levels between the ‘acute MY’, the ‘acute ON’ and the ‘acute BRAIN’ (B) subgroup.
A unifying primary framework for quantum graph neural networks from quantum graph states
Creators: name: Daskin, Ammar
Publisher: name: arXiv
Year: 2024
Subjects: subject: Quantum Physics (quant-ph)
subject: Machine Learning (cs.LG)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: Graph states are used to represent mathematical graphs as quantum states on quantum computers. They can be formulated through stabilizer codes or directly quantum gates and quantum states. In this paper we show that a quantum graph neural network model can be understood and realized based on graph states. We show that they can be used either as a parameterized quantum circuits to represent neural networks or as an underlying structure to construct graph neural networks on quantum computers.
description: short version 6 pages, a few important typos are corrected
Affective Polarization around Measures to Contain the COVID-19 Pandemic: A Survey Experiment
Creators: name: Faas, Thorsten
name: Joly, Philippe
name: Schieferdecker, David
Publisher: name: OSF Registries
Year: 2024
Subjects: subject: Political Science
subject: FOS: Political science
subject: Social and Behavioral Sciences
subject: COVID-19
subject: affective polarization
subject: ideology
subject: interpersonal contacts
subject: political polarization
subject: social distance

description: Affective polarization is the process through which members of opposing political camps develop feelings of animosity towards one another. This phenomenon can happen along partisan lines or be triggered by divisive political events. While the government response to the COVID-19 pandemic is widely perceived in the public as a divisive political issue, only a few studies have assessed its impact on affective polarization. Moreover, it remains unclear how attitudes towards the containment measures map onto and interact with preexisting ideological orientations. In this survey experiment, we will measure respondents’ perceived social distance (1) between people having similar or opposing views towards the containment measures and/or (2) between people having similar or opposing ideological orientations. We will then examine how these two types of conflicts interact in shaping people’s desire to enter into different forms of personal contacts.
Retention Induced Biases in a Recommendation System with Heterogeneous Users
Creators: name: Ma, Shichao
Publisher: name: arXiv
Year: 2024
Subjects: subject: Information Retrieval (cs.IR)
subject: FOS: Computer and information sciences

description: I examine a conceptual model of a recommendation system (RS) with user inflow and churn dynamics. When inflow and churn balance out, the user distribution reaches a steady state. Changing the recommendation algorithm alters the steady state and creates a transition period. During this period, the RS behaves differently from its new steady state. In particular, A/B experiment metrics obtained in transition periods are biased indicators of the RS's long-term performance. Scholars and practitioners, however, often conduct A/B tests shortly after introducing new algorithms to validate their effectiveness. This A/B experiment paradigm, widely regarded as the gold standard for assessing RS improvements, may consequently yield false conclusions. I also briefly touch on the data bias caused by the user retention dynamics.
description: This preprint has not undergone peer review (when applicable) or any post-submission improvements or corrections. The Version of Record of this contribution is published in advances in Bias and Fairness in Information Retrieval. BIAS 2024. Communications in Computer and Information Science, vol 2227. Springer, and is available online at https://doi.org/10.1007/978-3-031-71975-2_2
Additional file 4 of Cerebrospinal fluid findings in patients with myelin oligodendrocyte glycoprotein (MOG) antibodies. Part 1: Results from 163 lumbar punctures in 100 adult patients
Creators: name: Jarius, Sven
name: Pellkofer, Hannah
name: Siebert, Nadja
name: Korporal-Kuhnke, Mirjam
name: Hümmert, Martin W.
name: Ringelstein, Marius
name: Rommer, Paulus S.
name: Ayzenberg, Ilya
name: Ruprecht, Klemens
name: Klotz, Luisa
name: Asgari, Nasrin
name: Zrzavy, Tobias
name: Höftberger, Romana
name: Tobia, Rafik
name: Buttmann, Mathias
name: Fechner, Kai
name: Schanda, Kathrin
name: Weber, Martin
name: Asseyer, Susanna
name: Haas, Jürgen
name: Lechner, Christian
name: Kleiter, Ingo
name: Aktas, Orhan
name: Trebst, Corinna
name: Rostasy, Kevin
name: Reindl, Markus
name: Kümpfel, Tania
name: Paul, Friedemann
name: Wildemann, Brigitte
Publisher: name: figshare
Year: 2020
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 4: Supplementary Table 4. CSF findings in MOG-IgG-positive acute bilateral ON and in MOG-IgG-positive acute unilateral ON.
Additional file 5 of Cerebrospinal fluid findings in patients with myelin oligodendrocyte glycoprotein (MOG) antibodies. Part 1: Results from 163 lumbar punctures in 100 adult patients
Creators: name: Jarius, Sven
name: Pellkofer, Hannah
name: Siebert, Nadja
name: Korporal-Kuhnke, Mirjam
name: Hümmert, Martin W.
name: Ringelstein, Marius
name: Rommer, Paulus S.
name: Ayzenberg, Ilya
name: Ruprecht, Klemens
name: Klotz, Luisa
name: Asgari, Nasrin
name: Zrzavy, Tobias
name: Höftberger, Romana
name: Tobia, Rafik
name: Buttmann, Mathias
name: Fechner, Kai
name: Schanda, Kathrin
name: Weber, Martin
name: Asseyer, Susanna
name: Haas, Jürgen
name: Lechner, Christian
name: Kleiter, Ingo
name: Aktas, Orhan
name: Trebst, Corinna
name: Rostasy, Kevin
name: Reindl, Markus
name: Kümpfel, Tania
name: Paul, Friedemann
name: Wildemann, Brigitte
Publisher: name: figshare
Year: 2020
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 5: Supplementary Figure 1. CSF white cell counts in the ‘acute MY subgroup’, the ‘acute BRAIN subgroup and the ‘acute ON subgroup’.
Additional file 2 of Development and validation of a nomogram to predict survival outcome among epithelial ovarian cancer patients with site-distant metastases: a population-based study
Creators: name: Wang, Bo
name: Wang, Shixuan
name: Ren, Wu
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Additional file 2: Table s1. Demographics and Clinicopathologic Characteristics of Patients with Epithelial Ovarian Cancer.
System-environment quantum information flow
Creators: name: Mendonça, Taysa M.
name: Céleri, Lucas C.
name: Paternostro, Mauro
name: Soares-Pinto, Diogo O.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The return of the information from the environment to the system is a phenomenon can be related to existence of non-Markovian mechanisms in the environment and such transformation of resources can be useful for quantum information applications. Thus, understanding the details of the system-environment information dynamics, i.e., the transference of quantum resources is of key importance to design noise-resilient quantum technologies. In this work, we show how a quantum resource propagates from the main system to an environment, using as model a single qubit coupled to two linear chains of qubits, and also the information dynamics among the environment qubits. In this way, we characterize the propagation of information leaving the main qubit and going through the environment. Finally, we connect the conditions for the emergence of this dynamics to the existence of quantum Darwinism.
Additional file 1 of Development and validation of a nomogram to predict survival outcome among epithelial ovarian cancer patients with site-distant metastases: a population-based study
Creators: name: Wang, Bo
name: Wang, Shixuan
name: Ren, Wu
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Additional file 1: Figure s1. Flow diagram with selection procedure of patients with epithelial ovarian cancer for analysis.
Additional file 3 of Development and validation of a nomogram to predict survival outcome among epithelial ovarian cancer patients with site-distant metastases: a population-based study
Creators: name: Wang, Bo
name: Wang, Shixuan
name: Ren, Wu
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Additional file 3: Table s2. Demographics and Clinicopathologic Characteristics of Patients with Epithelial Ovarian Cancer in the OS and CSS cohort. Abbreviations: OS, overall survival. CSS, cancer specific survival.
Additional file 2: of Benchmark of computational methods for predicting microRNA-disease associations
Creators: name: Huang, Zhou
name: Liu, Leibo
name: Gao, Yuanxu
name: Shi, Jiangcheng
name: Cui, Qinghua
name: Li, Jianwei
name: Zhou, Yuan
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences

description: Supplementary figures. This additional file includes 3 supplementary figures, i.e. Figures S1-S3. (PDF 1430 kb)
MOESM1 of Heterogeneous BCR-ABL1 signal patterns identified by fluorescence in situ hybridization are associated with leukemic clonal evolution and poorer prognosis in BCR-ABL1 positive leukemia
Creators: name: Zhang, Zhanglin
name: Chen, Zhiwei
name: Jiang, Mei
name: Liu, Shuyuan
name: Guo, Yang
name: Wan, Lagen
name: Li, Fei
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Biotechnology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Hematology

description: Additional file 1: Table S1. FISH signal details in BCR-ABL1 positive ALL patients.
Detection of Micromobility Vehicles in Urban Traffic Videos
Creators: name: Sabri, Khalil
name: Djilali, Célia
name: Bilodeau, Guillaume-Alexandre
name: Saunier, Nicolas
name: Bouachir, Wassim
Publisher: name: arXiv
Year: 2024
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: Urban traffic environments present unique challenges for object detection, particularly with the increasing presence of micromobility vehicles like e-scooters and bikes. To address this object detection problem, this work introduces an adapted detection model that combines the accuracy and speed of single-frame object detection with the richer features offered by video object detection frameworks. This is done by applying aggregated feature maps from consecutive frames processed through motion flow to the YOLOX architecture. This fusion brings a temporal perspective to YOLOX detection abilities, allowing for a better understanding of urban mobility patterns and substantially improving detection reliability. Tested on a custom dataset curated for urban micromobility scenarios, our model showcases substantial improvement over existing state-of-the-art methods, demonstrating the need to consider spatio-temporal information for detecting such small and thin objects. Our approach enhances detection in challenging conditions, including occlusions, ensuring temporal consistency, and effectively mitigating motion blur.
description: Accepted at the 21st Conference on Robots and Vision (CRV), 2024
Additional file 1 of Nucleotide diversity of functionally different groups of immune response genes in Old World camels based on newly annotated and reference-guided assemblies
Creators: name: Lado, Sara
name: Elbers, Jean P.
name: Rogers, Mark F.
name: Melo-Ferreira, José
name: Yadamsuren, Adiya
name: Corander, Jukka
name: Horin, Petr
name: Burger, Pamela A.
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1: Supplemental Table 1. Assembly statistics for the CamFer2 and the Camelus ferus genome (new-CamFer) assembly from Ming et al. (2020b) using a genome size of 2.1 Gbp.
MOESM2 of Identification and characterization of genes frequently responsive to Xanthomonas oryzae pv. oryzae and Magnaporthe oryzae infections in rice
Creators: name: Kong, Weiwen
name: Ding, Li
name: Xia, Xue
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Environmental Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Virology
subject: Computational Biology

description: Additional file 2: Figure S2. Analysis on disease resistance mechanism of the up-regulated DRR/DSR proteins by Mor in rice.
Additional file 4 of Nucleotide diversity of functionally different groups of immune response genes in Old World camels based on newly annotated and reference-guided assemblies
Creators: name: Lado, Sara
name: Elbers, Jean P.
name: Rogers, Mark F.
name: Melo-Ferreira, José
name: Yadamsuren, Adiya
name: Corander, Jukka
name: Horin, Petr
name: Burger, Pamela A.
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 4: Supplemental Figure 2. D-GENIES (Cabanettes & Klopp, 2018) dot plot made with Minimap2 [68] whole-genome alignment between CamFer2 and the Camelus ferus genome (new-CamFer) assembly from Ming et al., [12]. Contigs are sorted and matches are filtered using the strong precision setting in D-GENIES.
Village Development and Ceramic Sequence: The Middle to Late Saxon village at Lordship Lane, Cottenham, Cambridgeshire
Creators: name: Mortimer, Richard
name: Hall, David N
Publisher: name: Archaeology Data Service
Year: 2001

description: Proceedings of the Cambridge Antiquarian Society, 89, 5-34
description: Excavations in 1996-97 uncovered some prehistoric (Meso, BA and IA) activity, but no Roman, on a mainly Mid-Late Saxon site. The Mid-Saxon phase saw an extensive ditch system with rectangular post buildings and a single grubenhaus set within ditched and fenced compounds. The Later Saxon phase saw radial pattern growth around an unseen core to the south east of the site. At this stage both the focus of the settlement and the pattern of development changed while respecting and incorporating the earlier settlement enclosure. This may represent the genesis of the nucleated village, forming out of a broader scattered hamlet. It is dated to the eighth or early-ninth century. The pattern was continued into the eleventh century until the abandonment of the area.
Additional file 6 of Nucleotide diversity of functionally different groups of immune response genes in Old World camels based on newly annotated and reference-guided assemblies
Creators: name: Lado, Sara
name: Elbers, Jean P.
name: Rogers, Mark F.
name: Melo-Ferreira, José
name: Yadamsuren, Adiya
name: Corander, Jukka
name: Horin, Petr
name: Burger, Pamela A.
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 6: Supplemental Figure 4. Means with 95% bootstrap confidence intervals (see Methods) of nucleotide diversity for alignments made with (left) non-synonymous SNPs, (right) all SNPs and indels in HC (heavy-chain) antibody (immunoglobulin) genes in DC (domestic camel), DROM (dromedary), and WC (wild camel). Uppercase letters above upper 95% confidence limits indicate groups have different (non-matching letters) or not different (matching letters) means based on non-overlapping confidence intervals.
Additional file 4 of Pediatric Tuina for functional constipation in children: study protocol for a randomized controlled trail
Creators: name: Zhang, Xinghe
name: Hu, Luan
name: Li, Li
name: Wang, Yuanwang
name: Zhang, Can
name: Su, Jinyan
name: Di, Hua
name: Gao, Qing
name: Tai, Xiantao
name: Guo, Taipin
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 4. Instruction of Medilac-Vita.
Additional file 2 of Nucleotide diversity of functionally different groups of immune response genes in Old World camels based on newly annotated and reference-guided assemblies
Creators: name: Lado, Sara
name: Elbers, Jean P.
name: Rogers, Mark F.
name: Melo-Ferreira, José
name: Yadamsuren, Adiya
name: Corander, Jukka
name: Horin, Petr
name: Burger, Pamela A.
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 2: Supplemental Table 2. Means with 95% bootstrap confidence limits (CL, see Methods) of nucleotide diversity for alignments made with non-synonymous and synonymous SNPs and indels and only non-synonymous SNPs in HC (heavy-chain) immunoglobulin genes in DC (domestic camel), DROM (dromedary), and WC (wild camel).
MOESM3 of Benchmark of computational methods for predicting microRNA-disease associations
Creators: name: Huang, Zhou
name: Liu, Leibo
name: Gao, Yuanxu
name: Shi, Jiangcheng
name: Cui, Qinghua
name: Li, Jianwei
name: Zhou, Yuan
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Mathematical Sciences not elsewhere classified

description: Additional file 3. Review history. (DOCX 21 kb)
Additional file 3 of Nucleotide diversity of functionally different groups of immune response genes in Old World camels based on newly annotated and reference-guided assemblies
Creators: name: Lado, Sara
name: Elbers, Jean P.
name: Rogers, Mark F.
name: Melo-Ferreira, José
name: Yadamsuren, Adiya
name: Corander, Jukka
name: Horin, Petr
name: Burger, Pamela A.
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 3: Supplemental Figure 1. RNA-Seq mapping rates.
Additional file 1 of Pediatric Tuina for functional constipation in children: study protocol for a randomized controlled trail
Creators: name: Zhang, Xinghe
name: Hu, Luan
name: Li, Li
name: Wang, Yuanwang
name: Zhang, Can
name: Su, Jinyan
name: Di, Hua
name: Gao, Qing
name: Tai, Xiantao
name: Guo, Taipin
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1. SPIRIT 2013 Checklist.
Additional file 5 of Nucleotide diversity of functionally different groups of immune response genes in Old World camels based on newly annotated and reference-guided assemblies
Creators: name: Lado, Sara
name: Elbers, Jean P.
name: Rogers, Mark F.
name: Melo-Ferreira, José
name: Yadamsuren, Adiya
name: Corander, Jukka
name: Horin, Petr
name: Burger, Pamela A.
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 5: Supplemental Figure 3. Means with 95% bootstrap confidence intervals (see Methods) of nucleotide diversity for alignments made with non-synonymous and synonymous SNPs and indels (a) and only non-synonymous SNPs (b): MHC class I and II genes (top panel), innate (second panel), adaptive (third panel), and the rest of genome genes (bottom panel) for: DROM (dromedary, C. dromedarius), DC (domestic Bactrian camel, C. bactrianus), and WC (wild camel, C. ferus). Uppercase letters above upper 95% confidence limits indicate groups have different (non-matching letters) or not different (matching letters) means based on non-overlapping confidence intervals.
The Topography of Anglo-Saxon Huntingdon: a survey of the archaeological and historical evidence
Creators: name: Spoerry, Paul
Publisher: name: Archaeology Data Service
Year: 2001

description: Proceedings of the Cambridge Antiquarian Society, 89, 35-48
description: First of two articles dealing with the pre-Conquest and the medieval town, two periods which in Huntingdon represent a real material distinction. The relation to Godmanchester on the opposite side of the River Great Ouse is considered.
Deterministic Bethe state preparation
Creators: name: Raveh, David
name: Nepomechie, Rafael I.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We present an explicit quantum circuit that prepares an arbitrary $U(1)$-eigenstate on a quantum computer, including the exact eigenstates of the spin-1/2 XXZ quantum spin chain with either open or closed boundary conditions. The algorithm is deterministic, does not require ancillary qubits, and does not require QR decompositions. The circuit prepares such an $L$-qubit state with $M$ down-spins using $\binom{L}{M}-1$ multi-controlled rotation gates and $2M(L-M)$ CNOT-gates.
description: 14 pages + supplementary material (qiskit code); v2: minor improvements; v3: improvements in the presentation and code, version accepted by Quantum