cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
title: Einfluss unterschiedlicher Referenztabellen auf die Beurteilung des Wachstumsverlaufs von Kindern mit Kleinwuchs
Creators: name: Doßow, Lauren
name: Mohnike, Klaus
name: Gausche, Ruth
name: Röhl, Friedrich-Wilhelm
Publisher: name: German Medical Science GMS Publishing House
Year: 2017
Subjects: subject: Biometrie
subject: 610 Medical sciences; Medicine

description: Einleitung: Für die Beurteilung der körperlichen Entwicklung von Kindern werden in der Regel „standard deviation scores“ (SDS) benutzt, die durch Bezug auf entsprechende Referenzpopulationen eine alters- und geschlechtsunabhängige Bewertung erlauben. Referenztabellen wurden[zum vollständigen Text gelangen Sie über die oben angegebene URL]
description: 62. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie e.V. (GMDS)
title: Die Planung einer cluster-randomisierten Studie in der Praxis – die "Komm mit in das gesunde Boot" Gesundheitsstudie
Creators: name: Dreyhaupt, Jens
name: Kobel, Susanne
name: Lauer, Romy
name: Mayer, Benjamin
name: Muche, Rainer
Publisher: name: German Medical Science GMS Publishing House
Year: 2017
Subjects: subject: Biometrie
subject: Epidemiologie
subject: 610 Medical sciences; Medicine

description: Einleitung: Cluster-randomisierte Studien sind ein wichtiges Werkzeug zum Erkenntnisgewinn in der medizinischen Forschung [ref:1]. Anstelle einzelner Individuen werden bestehende Gruppen von Individuen randomisiert (Cluster-Randomisierung). Oft wird dies in Situationen praktiziert, in denen[zum vollständigen Text gelangen Sie über die oben angegebene URL]
description: 62. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie e.V. (GMDS)
title: Nearest neighbour Matching in einer epidemiologischen Studie
Creators: name: Schaller, Mathias
name: von Gersdorff, Gero
Publisher: name: German Medical Science GMS Publishing House
Year: 2017
Subjects: subject: Epidemiologie
subject: 610 Medical sciences; Medicine

description: Einleitung: Das QiN Programm ist das Qualitätssicherungsprogramm des KfH (Kuratorium für Dialyse und Nierentransplantation), einem gemeinnützigen Dialyseanbieter in Deutschland. Im Jahr 2013 wurde im Rahmen einer Kooperation mit der 5 Dialysezentren eine Evaluation eines Sportprogammes[zum vollständigen Text gelangen Sie über die oben angegebene URL]
description: 62. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie e.V. (GMDS)
sj-docx-2-saj-10.1177_29767342231221004 – Supplemental material for The Impact of Completing X-Waiver Training and Clinical Addiction Exposure on Internal Medicine Residents Treating Patients With Opioid Use Disorder
Creators: name: Callister, Catherine
name: Porter, Samuel
name: Vatterott, Phillip
name: Keniston, Angela
name: McBeth, Lauren
name: Mann, Sarah
name: Calcaterra, Susan L.
name: Limes, Julia
Publisher: name: SAGE Journals
Year: 2024
Subjects: Public Health and Health Services not elsewhere classified

description: Supplemental material, sj-docx-2-saj-10.1177_29767342231221004 for The Impact of Completing X-Waiver Training and Clinical Addiction Exposure on Internal Medicine Residents Treating Patients With Opioid Use Disorder by Catherine Callister, Samuel Porter, Phillip Vatterott, Angela Keniston, Lauren McBeth, Sarah Mann, Susan L. Calcaterra and Julia Limes in Substance Abuse
Additional file 1 of To jump or not to jump: momentum of jumps in crude oil price volatility prediction
Creators: name: Zhang, Yaojie
name: Wang, Yudong
name: Ma, Feng
name: Wei, Yu
Publisher: name: figshare
Year: 2022
Subjects: subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Plant Biology

description: Additional file 1. Internet Appendix.
sj-docx-1-irp-10.1177_26334895231220277 - Supplemental material for Uncovering determinants of perceived feasibility of TF-CBT through coincidence analysis
Creators: name: Johnson, Clara
name: AlRasheed, Rashed
name: Gray, Christine
name: Triplett, Noah
name: Mbwayo, Anne
name: Weinhold, Andrew
name: Whetten, Kathryn
name: Dorsey, Shannon
Publisher: name: SAGE Journals
Year: 2024
Subjects: Psychology not elsewhere classified

description: Supplemental material, sj-docx-1-irp-10.1177_26334895231220277 for Uncovering determinants of perceived feasibility of TF-CBT through coincidence analysis by Clara Johnson, Rashed AlRasheed, Christine Gray, Noah Triplett, Anne Mbwayo, Andrew Weinhold, Kathryn Whetten and Shannon Dorsey in Implementation Research and Practice
sj-docx-1-rse-10.1177_07419325231220625 – Supplemental material for Perceptions of Local Special Education Administrators on Facilitating Career Development Services in Rural Districts
Creators: name: Schutz, Michele A.
Publisher: name: SAGE Journals
Year: 2024
Subjects: Education
Psychology not elsewhere classified
Special Education and Disability

description: Supplemental material, sj-docx-1-rse-10.1177_07419325231220625 for Perceptions of Local Special Education Administrators on Facilitating Career Development Services in Rural Districts by Michele A. Schutz in Remedial and Special Education
sj-pdf-4-jap-10.1177_10783903231216455 – Supplemental material for Postpartum Depression Screening Scale: Its Availability for Use
Creators: name: Beck, Cheryl Tatano
Publisher: name: SAGE Journals
Year: 2024
Subjects: Nursing not elsewhere classified
Psychology not elsewhere classified
Psychiatry (incl. Psychotherapy)

description: Supplemental material, sj-pdf-4-jap-10.1177_10783903231216455 for Postpartum Depression Screening Scale: Its Availability for Use by Cheryl Tatano Beck in Journal of the American Psychiatric Nurses Association
Reconsidering spaces left-over after planning
Creators: name: Kinoshita, Yohei
Publisher: name: RMIT University
Year: 2024

description: Suburbs in Melbourne present to us a unique context with which a new approach towards urban form can be devised using the existing conditions and opportunities found with infrastructural developments. This thesis contains the investigations on the various 'pathologies' of the urban fabric specifically on the potential use of 'Spaces Left-Over After Planning' as by-product to infrastructural development in relation to the reinvigoration of Melbourne suburbs under the influence of current and future metropolitan growth pressures. The contents of the research aims to demonstrate the potentials for urban diversification followed by densification using the already inherent characteristics of the selected suburbs (Oakleigh, Waverley and Broadmeadows) to facilitate the metropolitan expansion of Melbourne with the intention of encouraging ways in which suburban fabric can reach its matu rity along with new infrastructural developments to foster community engagement.
"Only ChatGPT gets me": An Empirical Analysis of GPT versus other Large Language Models for Emotion Detection in Text
Creators: name: Lecourt, Florian
name: Croitoru, Madalina
name: Todorov, Konstantin
Publisher: name: arXiv
Year: 2025
Subjects: subject: Computation and Language (cs.CL)
subject: Artificial Intelligence (cs.AI)
subject: FOS: Computer and information sciences

description: This work investigates the capabilities of large language models (LLMs) in detecting and understanding human emotions through text. Drawing upon emotion models from psychology, we adopt an interdisciplinary perspective that integrates computational and affective sciences insights. The main goal is to assess how accurately they can identify emotions expressed in textual interactions and compare different models on this specific task. This research contributes to broader efforts to enhance human-computer interaction, making artificial intelligence technologies more responsive and sensitive to users' emotional nuances. By employing a methodology that involves comparisons with a state-of-the-art model on the GoEmotions dataset, we aim to gauge LLMs' effectiveness as a system for emotional analysis, paving the way for potential applications in various fields that require a nuanced understanding of human language.
Additional file 2 of Social determinants of health and disparities in pediatric trauma care: protocol for a systematic review and meta-analysis
Creators: name: Gnanvi, Janyce Eunice
name: Yanchar, Natalie
name: Freire, Gabrielle
name: Beaulieu, Emilie
name: Tardif, Pier-Alexandre
name: Bérubé, Mélanie
name: Macpherson, Alison
name: Pike, Ian
name: Zemek, Roger
name: Gagnon, Isabelle J.
name: Carsen, Sasha
name: Gabbe, Belinda
name: Gnanou, Soualio
name: Duval, Cécile
name: Moore, Lynne
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 2: Table 1. Search strategy in PubMed. Table 2. Search strategy in EMBASE. Table 3. Search strategy in CINAHL. Table 4. Search strategy in PsycINFO. Table 5. Search strategy in Web of Science. Table 6. Search strategy in Academic Search Premier.
Additional file 3 of Social determinants of health and disparities in pediatric trauma care: protocol for a systematic review and meta-analysis
Creators: name: Gnanvi, Janyce Eunice
name: Yanchar, Natalie
name: Freire, Gabrielle
name: Beaulieu, Emilie
name: Tardif, Pier-Alexandre
name: Bérubé, Mélanie
name: Macpherson, Alison
name: Pike, Ian
name: Zemek, Roger
name: Gagnon, Isabelle J.
name: Carsen, Sasha
name: Gabbe, Belinda
name: Gnanou, Soualio
name: Duval, Cécile
name: Moore, Lynne
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 3: Table 1. Inclusion and exclusion criteria.
Additional file 7 of Does the growing of Bt maize change abundance or ecological function of non-target animals compared to the growing of non-GM maize? A systematic review
Creators: name: Meissle, Michael
name: Naranjo, Steven E.
name: Romeis, Jörg
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Biotechnology
subject: Ecology
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy
subject: Plant Biology

description: Additional file 7: Detailed results of statistical meta-analyses (14 Tables, 2 Figures).
Additional file 1 of Evaluation of bone depth, cortical bone, and mucosa thickness of palatal posterior supra-alveolar insertion site for miniscrew placement
Creators: name: Nucera, Riccardo
name: Ciancio, Elia
name: Maino, Giuliano
name: Barbera, Serena
name: Imbesi, Emanuela
name: Bellocchio, Angela Mirea
Publisher: name: figshare
Year: 2022
Subjects: subject: Space Science
subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer

description: Additional file 1. Supplementary Table 1. Inferential Statistics of Total Bone Depth (TBD). Supplementary Table 2. Inferential Statistics of Cortical Bone Thickness (CBT). Supplementary Table 3. Inferential Statistics of Mucosa Thickness (MT).
Computationally investigating and comparing the binding capacity of lactate andmalate dehydrogenases from the Apicomplexa Plasmodium falciparum and Babesiamicroti to Homo sapiens
Creators: name: Roche, Daniel B.
name: Sauer, Lena
name: Schwarz, Ralph T.
name: Usmani-Brown, Sahar
name: Milanesi, Sylvain
name: Mamoun, Choukri Ben
name: Cornillot, Emmanuel
Publisher: name: F1000Research
Year: 2017

description: Both Malate (MDH) and lactate (LDH) dehydrogenases are essential metabolic enzymes, which are structurally homologous, share a similar catalytic mechanism, yet retain specificity for their respective substrates. It has previously been shown that in Babesia microti the lactate dehydrogenase (LDH) results from horizontal gene transfer of an animal host ldh gene 1 . The Babesia microti LDH shows higher homology to human LDH, than LDH from other Apicomplexa. In apicomplexa, the ldh gene result from duplication of an mdh gene and via neofunctionalization acquiring LDH activity 2 . We suspect convergent evolution between the two types of LDH. We also investigate whether the B. microti LDH has moonlight MDH activity in addition to the specificity of the Babesia microti LDH, using the Plasmodium falciparum and Homo sapiens LDH and MDH as controls.
Kernelized rank learning for personalized drug recommendation
Creators: name: He, Xiao
name: Folkman, Lukas
name: Borgwardt, Karsten
Publisher: name: F1000Research
Year: 2017

description: Large-scale screenings of cancer cell lines with detailed molecular profiles against libraries of pharmacological compounds are currently being performed in order to gain a better understanding of the genetic component of drug response and to enhance our ability to recommend therapies given a patient's molecular profile. These comprehensive screens differ from the clinical setting in which (1) medical records only contain the response of a patient to very few drugs, (2) drugs are recommended by doctors based on their expert judgment, and (3) selecting the most promising therapy is often more important than accurately predicting the sensitivity to all potential drugs. Current regression models for drug sensitivity prediction fail to account for these three properties. We present a machine learning approach, named Kernelized Rank Learning (KRL), that ranks drugs based on their predicted effect per patient, circumventing the difficult problem of precisely predicting the sensitivity to the given drug. Our approach outperforms several state-of-the-art predictors in drug recommendation, particularly if the training dataset is sparse. Our work phrases personalized drug recommendation as a new type of machine learning problem with translational potential to the clinic. The Python implementation of KRL and scripts for running our experiments are available at https://github.com/BorgwardtLab/Kernelized-Rank-Learning.
Additional file 10 of Single-cell RNA sequencing of mitotic-arrested prospermatogonia with DAZL::GFP chickens and revealing unique epigenetic reprogramming of chickens
Creators: name: Choi, Hyeon Jeong
name: Jung, Kyung Min
name: Rengaraj, Deivendran
name: Lee, Kyung Youn
name: Yoo, Eunhui
name: Kim, Tae Hyun
name: Han, Jae Yong
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 10: Fig. S6. Violin plots showing expression of genes related to GO terms enriched in each cluster. (A) Violin plots showing expression of genes related to “cellular response to BMP stimulus”, “Wnt signaling pathway”, and “positive regulation of Notch signaling pathway” at E12, E16, and hatch. (B) Violin plots showing expression of genes related to “reproductive process” and “cellular component morphogenesis” at E12, E16, and hatch. (C) Violin plots showing expression of genes related to “lipid biosynthetic process” and “oxidative phosphorylation” at E12, E16, and hatch. (D) Violin plots showing expression of genes related to “positive regulation of cell adhesion” and “protein localization to extracellular region” at E12, E16, and hatch. (E) Violin plots showing expression of genes related to “response to endoplasmic reticulum stress protein recognition by luminal chaperones” at E12, E16, and hatch.
Developing executable BioPAX models of gene regulatory networks
Creators: name: Pavillet, Clara Eléonore
name: Voukantsis, Dimitris
name: Buffa, Francesca
Publisher: name: F1000Research
Year: 2017

description: Gene regulatory networks (GRNs) are complex, and still largely uncharacterized, sets of regulators and interactions that govern cellular processes, such as proliferation, invasion and metabolic adaptation. Virtually simulating biological pathways offers a powerful method to better understand the role of specific genes and pathways in health and disease, and predict cellular responses to perturbations or treatment.

Pathway data collected from the literature is represented computationally in various formats including SBML, SBGN, SIF, to name a few. The BioPAX (Biological Pathway Exchange) language is becoming a widely-used format to work with this data. It aims to offer flexibility and compatibility across computational methods and software to solve the issue of format disagreement from different data providers. Major pathway databases such as Reactome, WikiPathways, and Panther increasingly support file export to BioPAX.

Here, we aim to develop executable gene regulatory networks (GRNs) exploiting BioPAX. Having identified all major pathways repositories, we evaluated whether the file formats offered could be executed with available software tools. Whereas we could easily generate faithful visual representations of the GRNs considered, none of the tools available, including BioPAX supported tools, allowed us to efficiently simulate them. As a starting point, we provide a tool which converts BioPAX (.owl) models into GINML files (.ginml), a variant of GXL. These can be read in commonly used simulators like GINSim, offering a user-friendly interface to work and simulate BioPAX models, previously unavailable.
Additional file 2 of Inflammatory cytokines mediating the effect of oral lichen planus on oral cavity cancer risk: a univariable and multivariable mendelian randomization study
Creators: name: Zheng, Tao
name: Liu, Chengyong
name: Wang, Yetong
name: Zhou, Han
name: Zhou, Rong
name: Zhu, Xuan
name: Zhu, Zibing
name: Tan, Yisi
name: Li, Zhengrui
name: Huang, Xufeng
name: Tan, Jin
name: Zhu, Keke
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: Mathematical Sciences not elsewhere classified

description: Supplementary Material 2
EpiC: assessing epigenetics profiles in cancer samples contaminated by normal cells
Creators: name: Elnaz Saberi Ansari
name: Louis-Brennetot, Caroline
name: Leprovost, Nada
name: Janoueix-Lerosey, Isabelle
name: Schleiermacher, Gudrun
name: Boeva, Valentina
Publisher: name: F1000Research
Year: 2017

description: The aim of this research is to develop a computational method to characterize epigenetic profiles (histone modifications and open chromatin sites) in primary tumor tissues that represent a mixture of cancer and normal cells. This method can be used by researchers studying chromatin remodeling in cancer initiation and progression and searching for epigenetic markers associated with drug sensitivity and overall patient survival.

In this method, the enrichment in histone modifications in a primary tumor is modeled as a linear mixture of the signal coming from the normal and cancer cells. The sample with the lowest contamination level of normal cells is considered as the reference and the algorithm tries to extract the tumor signals from the samples. The data are normalized by the copy number and the tumor purity, which are assessed using the Control-FREEC software, and also by the noise ratio between different experiments. After removing the tumor signal, the remained signal (a mixture of normal cells) is subject to linear decomposition using non-negative matrix factorization algorithm or independent component analysis.

Our method will be validated on both simulated and experimental datasets. During the validation on the simulated data, we will address such questions as the minimal required number of tumor samples, the maximal level of contamination and the maximal number of different contaminating normal cell types. Experimental validation will be done on 16 various neuroblastoma cell lines contaminated with normal cell lines at different rates. ChIP-seq profiles for 3 histone marks for two normal and 19 neuroblastoma cell lines are already available in our lab.

This project is supported by the worldwide cancer research.
Data-driven subspace-based model predictive control
Creators: name: Mardi, Noor Azizi
Publisher: name: RMIT University
Year: 2024

description: The desire to develop control systems that can be rapidly deployed has resulted in the formulation of algorithms that combine system identification with the development of control technique resulting in a single-step implementation. One such algorithm is Subspace Model Predictive Control (SMPC), which is a combination of results from subspace methods in system identification and model predictive control. In this thesis, novel algorithms of SMPC are investigated and developed. More specifically, a data filtering procedure is proposed in the computation of subspace predictor coefficients, resulting in the suppression of non-stationary disturbance in the identification data and incorporation of integrator in the predictive control law. Computational advantages of parameterization of control input trajectory using Laguerre functions are demonstrated and extended to Multi-input and Multi-output (MIMO) systems. By manipulating the unique structure of subspace data matrices, an efficient recursive algorithm for the updating of subspace predictor coefficients is investigated. This efficient algorithm is then extended to SMPC for time-varying systems, with the proposal of a novel recursive control law. The advantage of this implementation is that recursive updating is only performed when there is plant-predictor mismatch, thus input and output signals need not be persistently exciting at all times. Consequently, unnecessary fluctuations of signals are avoided, resulting in a smoother steady-state response. Finally, an implementation of a variable forgetting factor was introduced in order to facilitate faster convergence. These innovative approaches result in more efficient and reliable SMPC algorithms, thus making this design methodology a promising choice for control system design and implementation. Experimental results obtained from Permanent Magnetic Synchronous Machine and DC motor are used to demonstrate the efficacy of the proposed approaches.
Being there: pinning something down
Creators: name: Wright, Georgina
Publisher: name: RMIT University
Year: 2024

description: 'Being There' is about developing appropriate design processes which have the opportunity to give local communities a voice through the language of landscape. My Research aimed to learn from Australia's Indigenous conscience to attain more culturally, ecologically and socially accurate modes of engagement with the landscape throughout design practice. Stretching between Coober Pedy and Tweed Heads 'Being There' has become an exploration into the Landscape Architectural practice of engaging intimately with site and community through grounded techniques. In addition, the work aspires to engage with the idea of evolutionary design processes, which envisage landscape projects as points of open-ended interaction with site and place. 'Being there' is not only about spending time in one place, but also the techniques that these opportunities have given me such as documenting information gleaned through the eyes of local experts. As a practitioner, I can not do this without appropriately engaging in the richness and complexity of place defined and revealed through the challenge of communication. In this mode of design the processes of analysis and consultation act as lenses in curating the existing condition, defining its successes and failures in the cultural terms of people and place. Here, in contrast to my former practice, the intent is that design recovers landscape, rather than recreating it.
Additional file 11 of Single-cell RNA sequencing of mitotic-arrested prospermatogonia with DAZL::GFP chickens and revealing unique epigenetic reprogramming of chickens
Creators: name: Choi, Hyeon Jeong
name: Jung, Kyung Min
name: Rengaraj, Deivendran
name: Lee, Kyung Youn
name: Yoo, Eunhui
name: Kim, Tae Hyun
name: Han, Jae Yong
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 11: Fig. S7. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway-enrichment analysis in all DEGs of each cluster. (A) KEGG pathway-enrichment analysis. (B) DEGs of Cluster 3 and Cluster 4 in the Notch signaling pathway. Yellow indicates DEGs included in cluster 3, and green indicates DEGs included in cluster 4. (C) Violin plots showing expression of genes related to Notch signaling at E12, E16, and hatch.
ПОЧВЕННАЯ МЕЗОФАУНА И МЕТОДЫ ЕЁ ИЗУЧЕНИЯ
Creators: name: ГОДУНОВА ЕВГЕНИЯ ИВАНОВНА, ЧЕНИКАЛОВА ЕЛЕНА ВЛАДИМИРОВНА
Publisher: name: Ставропольское издательство "Параграф" (Ставрополь)
Year: 2018

description: В пособии описаны организмы, составляющие почвенную мезофауну Центрального Предкавказья и методы её изучения. Включает краткие характеристики почвообитающих животных, их биологии и распространения.Приведены способы сбора и выявления почвенной мезофауны. Вторая часть книги содержит сведенья о важнейших вредителях, методы их учёта и прогноза.
Additional file 12 of Single-cell RNA sequencing of mitotic-arrested prospermatogonia with DAZL::GFP chickens and revealing unique epigenetic reprogramming of chickens
Creators: name: Choi, Hyeon Jeong
name: Jung, Kyung Min
name: Rengaraj, Deivendran
name: Lee, Kyung Youn
name: Yoo, Eunhui
name: Kim, Tae Hyun
name: Han, Jae Yong
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 12: Fig. S8. Dynamics of genes associated with DNA methylation involved in gamete generation. (A) Heatmap showing expression of these genes at E12, E16, and hatch. (B) UMAP and violin plot showing expression of TDRD5, MAEL, PRMT7, and TDRD1 at E12, E16, and hatch.
Photonic implementation of an instantaneous frequency measurement
Creators: name: Sarkhosh, Niusha
Publisher: name: RMIT University
Year: 2024

description: With the rapid and ongoing developments in telecommunication and electronic warfare technology, faster and more flexible systems are in demand. Wideband signal processing is thus needed to implement such systems. Microwave photonics has been introduced as a tool for achieving such ultra broadband signal processing.

Instantaneous Frequency Measurement (IFM) receivers play an important role in electronic warfare. They have been developed as a means of obtaining a rapid indication of the presence of a threat and to roughly identify the frequency of the threat signals. They also have the advantages of low-cost, compactness and moderate to good sorting capability in an interference-free environment. The main limitation of the traditional RF IFM receivers is constrained bandwidth. Microwave Photonic IFMs have been considered, but the main disadvantages of photonic realization of the recent IFM receiver is cost.

This work aims to propose and demonstrate low-cost photonic IFM receivers with a broad frequency measurement range. The proposed methods are based on the use of photonic mixing to down-convert the RF modulated optical signals to DC. In a RADAR warning receiver, usually a bank of IFMs is required. Increasing the numbers of IFMs requires an increase in the number of photo-detectors. Thus if low-frequency, low-cost detectors can be used, then the net system cost will be reduced significantly. The concept is proven and the issues arising are analyzed. In the proof of concept system, measurement of the RF frequency required advance knowledge of the RF power. Secondly, the use of co-axial RF cables as delay elements limited the bandwidth and increased bulk.

Using a photonic hybrid approach to achieve orthogonal measurements was demonstrated as a means of dentifying both RF frequency and power simultaneously and independently. Employing all optical mixing removed the need for co-axial RF cables delays using non-linear optical devices such as Semiconductor Optical Amplifier (SOA) and Highly Non-Linear Fiber (HLNF).

The last investigation is to improve the sensitivity of the implemented IFM system. The sensitivity of the implemented system is characterized first and a lock-in technique is employed to improve the sensitivity of the system. The final system achieves a sensitivity of -41 dBm which is comparable with the traditional RF IFM receivers.
Additional file 1 of Correlation between dental and skeletal maturity in Korean children based on dental maturity percentile: a retrospective study
Creators: name: Ong, Seung-Hwan
name: Kim, Hyuntae
name: Song, Ji-Soo
name: Shin, Teo Jeon
name: Hyun, Hong-Keun
name: Jang, Ki-Taeg
name: Kim, Young-Jae
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Environmental Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy
subject: Hematology

description: Supplementary Material 1
sj-pdf-1-sri-10.1177_15533506211047011 – Supplemental Material for Comparison of the Postoperative Complications Between Robotic Total and Distal Gastrectomies for Gastric Cancer Using Clavien–Dindo Classification: A Propensity Score-matched Retrospective Cohort Study of 726 Patients
Creators: name: Li, Zheng-yan
name: Zhao, Yong-liang
name: Qian, Feng
name: Tang, Bo
name: Luo, Zi-yan
name: Wen, Yan
name: Shi, Yan
name: Yu, Pei-wu
Publisher: name: SAGE Journals
Year: 2022
Subjects: Orthopaedics
Sports Medicine
Surgery
Engineering not elsewhere classified
Materials Engineering not elsewhere classified

description: Supplemental Material, sj-pdf-1-sri-10.1177_15533506211047011 for Comparison of the Postoperative Complications Between Robotic Total and Distal Gastrectomies for Gastric Cancer Using Clavien–Dindo Classification: A Propensity Score-matched Retrospective Cohort Study of 726 Patients by Zheng-yan Li, Yong-liang Zhao, Feng Qian, Bo Tang, Zi-yan Luo, Yan Wen, Yan Shi and Pei-wu Yu in Surgical Innovation
Additional file 2 of Correlation between dental and skeletal maturity in Korean children based on dental maturity percentile: a retrospective study
Creators: name: Ong, Seung-Hwan
name: Kim, Hyuntae
name: Song, Ji-Soo
name: Shin, Teo Jeon
name: Hyun, Hong-Keun
name: Jang, Ki-Taeg
name: Kim, Young-Jae
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Environmental Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy
subject: Hematology

description: Supplementary Material 2
sj-docx-1-aut-10.1177_13623613221119749 – Supplemental material for Mental health of autistic adults during the COVID-19 pandemic: The impact of perceived stress, intolerance of uncertainty, and coping style
Creators: name: Evers, Kris
name: Gijbels, Eef
name: Maljaars, Jarymke
name: Rumball, Freya
name: Spain, Debbie
name: Happé, Francesca
name: Noens, Ilse
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: 110319 Psychiatry (incl. Psychotherapy)
subject: FOS: Clinical medicine
subject: 111799 Public Health and Health Services not elsewhere classified
subject: FOS: Health sciences
subject: Education
subject: 130312 Special Education and Disability
subject: FOS: Educational sciences

description: Supplemental material, sj-docx-1-aut-10.1177_13623613221119749 for Mental health of autistic adults during the COVID-19 pandemic: The impact of perceived stress, intolerance of uncertainty, and coping style by Kris Evers, Eef Gijbels, Jarymke Maljaars, Freya Rumball, Debbie Spain, Francesca Happé and Ilse Noens in Autism
Additional file 13 of Single-cell RNA sequencing of mitotic-arrested prospermatogonia with DAZL::GFP chickens and revealing unique epigenetic reprogramming of chickens
Creators: name: Choi, Hyeon Jeong
name: Jung, Kyung Min
name: Rengaraj, Deivendran
name: Lee, Kyung Youn
name: Yoo, Eunhui
name: Kim, Tae Hyun
name: Han, Jae Yong
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 13: Fig. S9. Additional investigation of global DNA methylation of chicken male germ cells from E2.5 to after hatching. (A) Determination of global DNA methylation in left testis germ cells at E12, E16, hatch, and post-hatch (such as 4 d, 1 week, 2 weeks, 3 weeks, and 4 weeks post-hatch) by anti-5-methylcytosine (5-mC) and anti-DAZL antibody immunohistochemistry. As additional images extended in Fig. 6, images of experiments performed in three biologically independent animals each at all time points (from E12 to 3 weeks post-hatch) are shown with images showing a wider field. For each time point, the scale bars are 100 μm, 20 μm, and 10 μm from the left to right, respectively.
The effects of diabetes on vascular function and potential treatment with a flavonol
Creators: name: Leo, Chen Huei
Publisher: name: RMIT University
Year: 2024

description: Endothelial cells, lining all blood vessels, can release both relaxing and contracting factors to modulate the tone of the underlying smooth muscle. Endothelium-dependent relaxation is mediated by multiple factors including nitric oxide (NO), prostacyclin and an unidentified endothelium-derived hyperpolarizing factor (EDHF). Diabetes mellitus is characterized by hyperglycaemia resulting from a defective secretion or action of endogenous insulin. It is well established that diabetes often causes macro- and microvascular complications in human and animal models of diabetes, and several lines of evidence suggest that endothelial dysfunction could play a critical and initiating role in the development of these complications. It remains unclear how the relative contribution of endothelium-derived factors to relaxation were modulated over the course of diabetes-induced hyperglycaemia. The aim of this thesis was to examine the effects of early and later stages of diabetes on vascular function, and to explore the potential use of a flavonol as an alternative treatment for diabetic vascular diseases. This thesis provided further insights in the pathological process underlying endothelial dysfunction in both macro- and microvasculature over the duration of hyperglycaemia. At the early stages of diabetes, hyperglycaemia caused oxidative stress through the increase in NADPH oxidase expression/activity and endothelial NO synthase (eNOS) uncoupling but endothelial function was maintained. At the later stages of diabetes, the increase in NADPH oxidase expression/activity and eNOS uncoupling continued to contribute to oxidative stress, suggesting that the increase in NADPH oxidase expression/activity and eNOS uncoupling are an early contributor to hyperglycaemia-induced endothelial dysfunction. Endothelial dysfunction is associated with an impairment of both NO and EDHF. Short term treatment with a novel antioxidant, 3’,4’-dihydroxyflavonol (DiOHF) in diabetic rats had no effect on the glycaemic levels, indicating that DiOHF improves vascular function via a glucose lowering-independent pathway. The protective actions of DiOHF occur through at least two mechanisms: DiOHF is able to rapidly scavenge ROS and/or inhibit the enzymatic source for superoxide production (i.e. NADPH oxidase and eNOS uncoupling). Treatment with DiOHF improves endothelial function primarily through the preservation of NO function. The ability of DiOHF to inhibit superoxide production derived from NADPH oxidase and eNOS uncoupling makes it a potential adjunctive treatment for diabetic vascular complications.
sj-pdf-1-cre-10.1177_02692155221134477 - Supplemental material for Effect of perioperative pelvic floor muscle training program on incontinence and quality of life after radical prostatectomy: A randomized controlled trial
Creators: name: Gezginci, Elif
name: Goktas, Sonay
name: Ata, Aysenur
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 110904 Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: 110314 Orthopaedics
subject: 110604 Sports Medicine
subject: FOS: Health sciences

description: Supplemental material, sj-pdf-1-cre-10.1177_02692155221134477 for Effect of perioperative pelvic floor muscle training program on incontinence and quality of life after radical prostatectomy: A randomized controlled trial by Elif Gezginci, Sonay Goktas and Aysenur Ata in Clinical Rehabilitation
sj-docx-5-jfm-10.1177_1098612X221128760 – Supplemental material for 2022 AAFP/ISFM Cat Friendly Veterinary Interaction Guidelines: Approach and Handling Techniques
Creators: name: Rodan, Ilona
name: Dowgray, Nathalie
name: Carney, Hazel C
name: Carozza, Ellen
name: Ellis, Sarah LH
name: Heath, Sarah
name: Niel, Lee
name: St Denis, Kelly
name: Taylor, Samantha
Publisher: name: SAGE Journals
Year: 2022
Subjects: Veterinary Medicine

description: Supplemental material, sj-docx-5-jfm-10.1177_1098612X221128760 for 2022 AAFP/ISFM Cat Friendly Veterinary Interaction Guidelines: Approach and Handling Techniques by Ilona Rodan, Nathalie Dowgray, Hazel C Carney, Ellen Carozza, Sarah LH Ellis, Sarah Heath, Lee Niel, Kelly St Denis and Samantha Taylor in Journal of Feline Medicine and Surgery
Additional file 14 of Single-cell RNA sequencing of mitotic-arrested prospermatogonia with DAZL::GFP chickens and revealing unique epigenetic reprogramming of chickens
Creators: name: Choi, Hyeon Jeong
name: Jung, Kyung Min
name: Rengaraj, Deivendran
name: Lee, Kyung Youn
name: Yoo, Eunhui
name: Kim, Tae Hyun
name: Han, Jae Yong
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 14: Fig. S10. Gating strategy for cell cycle analysis of DAZL-expressing cells at hatch and post-hatch.
sj-docx-9-jfm-10.1177_1098612X221128760 – Supplemental material for 2022 AAFP/ISFM Cat Friendly Veterinary Interaction Guidelines: Approach and Handling Techniques
Creators: name: Rodan, Ilona
name: Dowgray, Nathalie
name: Carney, Hazel C
name: Carozza, Ellen
name: Ellis, Sarah LH
name: Heath, Sarah
name: Niel, Lee
name: St Denis, Kelly
name: Taylor, Samantha
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 70706 Veterinary Medicine
subject: FOS: Veterinary sciences

description: Supplemental material, sj-docx-9-jfm-10.1177_1098612X221128760 for 2022 AAFP/ISFM Cat Friendly Veterinary Interaction Guidelines: Approach and Handling Techniques by Ilona Rodan, Nathalie Dowgray, Hazel C Carney, Ellen Carozza, Sarah LH Ellis, Sarah Heath, Lee Niel, Kelly St Denis and Samantha Taylor in Journal of Feline Medicine and Surgery
sj-pdf-1-jfm-10.1177_1098612X221128760 – Supplemental material for 2022 AAFP/ISFM Cat Friendly Veterinary Interaction Guidelines: Approach and Handling Techniques
Creators: name: Rodan, Ilona
name: Dowgray, Nathalie
name: Carney, Hazel C
name: Carozza, Ellen
name: Ellis, Sarah LH
name: Heath, Sarah
name: Niel, Lee
name: St Denis, Kelly
name: Taylor, Samantha
Publisher: name: SAGE Journals
Year: 2022
Subjects: Veterinary Medicine

description: Supplemental material, sj-pdf-1-jfm-10.1177_1098612X221128760 for 2022 AAFP/ISFM Cat Friendly Veterinary Interaction Guidelines: Approach and Handling Techniques by Ilona Rodan, Nathalie Dowgray, Hazel C Carney, Ellen Carozza, Sarah LH Ellis, Sarah Heath, Lee Niel, Kelly St Denis and Samantha Taylor in Journal of Feline Medicine and Surgery
Additional file 1 of Single-cell RNA sequencing of mitotic-arrested prospermatogonia with DAZL::GFP chickens and revealing unique epigenetic reprogramming of chickens
Creators: name: Choi, Hyeon Jeong
name: Jung, Kyung Min
name: Rengaraj, Deivendran
name: Lee, Kyung Youn
name: Yoo, Eunhui
name: Kim, Tae Hyun
name: Han, Jae Yong
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1: Table S1. Samples information of DAZL::GFP chicken germ cells used for scRNA-seq.
Additional file 3 of Correlation between dental and skeletal maturity in Korean children based on dental maturity percentile: a retrospective study
Creators: name: Ong, Seung-Hwan
name: Kim, Hyuntae
name: Song, Ji-Soo
name: Shin, Teo Jeon
name: Hyun, Hong-Keun
name: Jang, Ki-Taeg
name: Kim, Young-Jae
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Environmental Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy
subject: Hematology

description: Supplementary Material 3
Exegesis: strategy and learning: a path to organisational change
Creators: name: Kenny, John
Publisher: name: RMIT University
Year: 2024

description: This Exegesis and the Portfolio document referred to herein report on the outcomes of my research towards a PhD in education (by Project) between mid 2001 and July 2005. The Portfolio contains a collection of ten papers written during the research and also a summary of the key tools and processes resulting from the research. This Exegesis contains the major theoretical arguments leading to the development of the research outcomes, the methodology employed and a description of the organisational context operating during the study. It also draws links between the various data sets as presented in the Portfolio. The research began with a consideration of a major change project at RMIT University: the Implementation of the Distributed Learning System (DLS). The problems associated with this project highlighted the need for holistic organisational approaches to change and the uncertain nature of radical change projects. This led into a consideration of broader questions to do with organisational change and managing uncertainty. The generalisability of the research findings was enhanced by the wide ranging literature review and data from a range of stakeholders. This ultimately led to the development of a 'Maturity Model for Strategy' and a series of associated processes and management tools. These tools are offered as a means of assisting organisations wishing to understand the complexity of the change process. In the end the Maturity Model was applied to the DLS project as a means of illustrating its value in understanding the specific case, in which I was intimately involved.
Additional file 2 of Single-cell RNA sequencing of mitotic-arrested prospermatogonia with DAZL::GFP chickens and revealing unique epigenetic reprogramming of chickens
Creators: name: Choi, Hyeon Jeong
name: Jung, Kyung Min
name: Rengaraj, Deivendran
name: Lee, Kyung Youn
name: Yoo, Eunhui
name: Kim, Tae Hyun
name: Han, Jae Yong
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 2: Fig. S1. Information on quality control of the scRNA-seq. (A) Table showing thresholds of three factors for quality control of the scRNA-seq data in all samples. (B) PCA plots for quality control in samples of three time points (E12, E16, and hatch). In the QC passed plots, light blue droplets represent cells that passed through all QC criteria. nUMI = the number of unique molecular identifier; nGene = the number of detected genes; %mtDNA = proportion of the mitochondrial gene.
The girlie werewolf hall of fame: historical and contemporary figurations of the female lycanthrope
Creators: name: Cininas, Jazmina
Publisher: name: RMIT University
Year: 2024

description: The Girlie Werewolf Hall of Fame: Historical and Contemporary Figurations of the Female Lycanthrope is a visually-based project that identifies individual women, both real and fictional, from throughout Western history who embody diverse aspects of the werewolf legend. The key outcome is a gallery of original reduction linocut portraits which, together, create a novel visual mythography of the female werewolf informed by the myriad incarnations of female lycanthropy while also bringing to light hidden or forgotten narratives. An accompanying exegesis serves to contextualise the portraits within the history of representations of female lycanthropy, including works by contemporary visual artists who explore conflations of lupine and feminine identity.

The original portraits and exegesis that make up The Girlie Werewolf Hall of Fame: Historical and Contemporary Figurations of the Female Lycanthrope have been framed by the following questions:
• Who might fulfil the cultural and/or historical criteria necessary to be identified as a female werewolf
• How might one visually represent the ‘attributes’ that identify an individual as a female werewolf?
• What are some of the ways in which changing representations of female werewolves throughout history serve as barometers for cultural change?

Together, the portraits and the exegesis document the history of female lycanthropy while offering novel possibilities for imagining and interpreting female lycanthropy.
sj-docx-1-jbd-10.1177_01650254221132775 – Supplemental material for The mediating role of loneliness on relations between face-to-face and virtual interactions and psychological well-being across age: A 21-day diary study
Creators: name: Tsang, Vivian H. L.
name: Tse, Dwight C. K.
name: Chu, Li
name: Fung, Helene H.
name: Mai, Chunyan
name: Zhang, Hanyu
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology

description: Supplemental material, sj-docx-1-jbd-10.1177_01650254221132775 for The mediating role of loneliness on relations between face-to-face and virtual interactions and psychological well-being across age: A 21-day diary study by Vivian H. L. Tsang, Dwight C. K. Tse, Li Chu, Helene H. Fung, Chunyan Mai and Hanyu Zhang in International Journal of Behavioral Development