cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
The Vlasov limit and its fluctuations for a system of particles which interact by means of a wave field
Creators: name: Elskens, Yves
name: Kiessling, Michael K. -H.
name: Ricci, Valeria
Publisher: name: arXiv
Year: 2005
Subjects: subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences
subject: 37K99

description: In two recent publications [Commun. PDE, vol.22, p.307--335 (1997), Commun. Math. Phys., vol.203, p.1--19 (1999)], A. Komech, M. Kunze and H. Spohn studied the joint dynamics of a classical point particle and a wave type generalization of the Newtonian gravity potential, coupled in a regularized way. In the present paper the many-body dynamics of this model is studied. The Vlasov continuum limit is obtained in form equivalent to a weak law of large numbers. We also establish a central limit theorem for the fluctuations around this limit.
description: 68 pages. Smaller corrections: two inequalities in sections 3 and two inequalities in section 4, and definition of a Banach space in appendix A1. Presentation of LLN and CLT in section 4.3 improved. Notation improved
Universality in the Critical Behavior of the Correlation Functions in 2d Simplicial Gravity
Creators: name: Jurkiewicz, J.
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: The analogue of the loop-loop correlation function in 2d gravity for the planar connected $ϕ^3$ diagrams is calculated. It is shown that although the discretized formulas are different the scaling limit is the same as for the loop-loop correlation function. The derivation may serve as an alternative definition of the volume-volume correlator of Euclidean quantum gravity in $2d$.
description: 9 pages, LaTeX
Additional file 10: of A comparison of methods used to unveil the genetic and metabolic pool in the built environment
Creators: name: Gomez-Silvan, Cinta
name: Leung, Marcus
name: Grue, Katherine
name: Randeep Kaur
name: Xinzhao Tong
name: Lee, Patrick
name: Andersen, Gary
Publisher: name: figshare
Year: 2018
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Physiology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Figure S2. Correlation network structure between DNA and RNA components of the microbiome. Density plot of intra-genus (red) and inter-genus (blue) correlations within the (A) DNA and (B) RNA components of the microbiome. Plots are faceted for each microbiome component based on whether the correlation is positive or negative. Câ F. Network structure comparison between DNA (blue) and RNA (red) components of the microbiome in terms of (C) degree distribution, and natural connectivity upon removal of network node either (D) randomly or via decreasing order of (E) degree or (F) betweenness centrality. Network structure analyzed using SPIEC-EASI. (PDF 1413Â kb)
Fatiguing STDP: Learning from Spike-Timing Codes in the Presence of Rate Codes
Creators: name: Moraitis, Timoleon
name: Sebastian, Abu
name: Boybat, Irem
name: Gallo, Manuel Le
name: Tuma, Tomas
name: Eleftheriou, Evangelos
Publisher: name: arXiv
Year: 2017
Subjects: subject: Neural and Evolutionary Computing (cs.NE)
subject: Machine Learning (cs.LG)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: Spiking neural networks (SNNs) could play a key role in unsupervised machine learning applications, by virtue of strengths related to learning from the fine temporal structure of event-based signals. However, some spike-timing-related strengths of SNNs are hindered by the sensitivity of spike-timing-dependent plasticity (STDP) rules to input spike rates, as fine temporal correlations may be obstructed by coarser correlations between firing rates. In this article, we propose a spike-timing-dependent learning rule that allows a neuron to learn from the temporally-coded information despite the presence of rate codes. Our long-term plasticity rule makes use of short-term synaptic fatigue dynamics. We show analytically that, in contrast to conventional STDP rules, our fatiguing STDP (FSTDP) helps learn the temporal code, and we derive the necessary conditions to optimize the learning process. We showcase the effectiveness of FSTDP in learning spike-timing correlations among processes of different rates in synthetic data. Finally, we use FSTDP to detect correlations in real-world weather data from the United States in an experimental realization of the algorithm that uses a neuromorphic hardware platform comprising phase-change memristive devices. Taken together, our analyses and demonstrations suggest that FSTDP paves the way for the exploitation of the spike-based strengths of SNNs in real-world applications.
description: 8 pages, 8 figures, presented at IJCNN in May 2017
A New Form of the Spherical Expansion of Zonal Functions and Fourier Transforms of SO(d)-Finite Functions
Creators: name: Bezubik, Agata
name: Strasburger, Aleksander
Publisher: name: arXiv
Year: 2006
Subjects: subject: Mathematical Physics (math-ph)
subject: Classical Analysis and ODEs (math.CA)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: This paper presents recent results obtained by the authors (partly in collaboration with A. Dabrowska) concerning expansions of zonal functions on Euclidean spheres into spherical harmonics and some applications of such expansions for problems involving Fourier transforms of functions with rotational symmetry. The method used to derive the expansion formula is based entirely on differential methods and completely avoids the use of various integral identities commonly used in this context. Some new identities for the Fourier transform are derived and as a byproduct seemingly new recurrence relations for the classical Bessel functions are obtained.
description: Published in SIGMA (Symmetry, Integrability and Geometry: Methods and Applications) at http://www.emis.de/journals/SIGMA/
Identification of spin wave resonances and crystal field transitions in simple chromites RCrO3 (R=Pr, Sm, Er) at ultralow temperatures in the THz spectral region
Creators: name: Massa, Néstor E.
name: Holldack, Karsten
name: Sopracase, Rodolphe
name: Phuoc, Vinh Ta
name: del Campo, Leire
name: Echegut, Patrick
name: Alonso, José Antonio
Publisher: name: arXiv
Year: 2017
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We report on THz absorption spectroscopy combined with high magnetic fields of polycrystalline RCrO3 (R= Pr, Sm, Er) aiming understanding spin wave resonances at their low temperature magnetic phases. Our measurements show that the temperature, and the implicit anisotropies at which the Cr3+ spin reorientation at TSR takes place, are determinant on the ferromagnetic-like (FM) and the antiferromagnetic-like (AFM) spin modes being optically active. It is found that they are dependent on Rare Earth 4f moment and ion size. We also studied temperature and field dependence of crystal field levels in the same spectroscopic region. Pr3+ non-Kramers emerges at 100 K and Zeeman splits. An observed absence of spin wave resonances in PrCrO3 is attributed to Pr3+ remaining paramagnetic. In SmCrO3 near cancelation of the spin and orbital moments is proposed as the possible reason for not detecting Sm3+ ground state transitions. Here, the FM and AFM resonant modes harden when the temperature decreases and split linearly on applied fields at 5 K and below. In ErCrO3 the Er3+ Kramers doublet becomes active at about the TSR onset. Each line further experiences Zeeman splitting under magnetic fields while an spin reversal induced by a 2.5 T field, back to the Gamma4 (Fz) from the Gamma1 phase at 2 K, produces a secondary splitting. The 5 K AFM and FM excitations in ErCrO3 have a concerted frequency-intensity temperature dependence and a shoulder pointing to the Er3+ smaller ion size also disrupting the two magnetic sublattice approximation . Both resonances reduce to one when the temperature is lowered to 2 K in the Gamma1 representation.
description: 50 pages, 14 figures
Additional file 1: of CT-based peritumoral radiomics signatures to predict early recurrence in hepatocellular carcinoma after curative tumor resection or ablation
Creators: name: Shan, Quan-yuan
name: Hu, Hang-tong
name: Feng, Shi-ting
name: Peng, Zhen-peng
name: Chen, Shu-ling
name: Zhou, Qian
name: Li, Xin
name: Xie, Xiao-yan
name: Lu, Ming-de
name: Wang, Wei
name: Kuang, Ming
Publisher: name: figshare
Year: 2019
Subjects: Biochemistry
Medicine
Molecular Biology
Chemical Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified
Developmental Biology
Science Policy

description: Detailed introduction of calibration curves and decision curves, category-free Net Reclassification Index and integrated discrimination improvement. (DOCX 20 kb)
On applicability of differential mixing rules for statistically homogeneous and isotropic dispersions
Creators: name: Semenov, A. K.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Other Condensed Matter (cond-mat.other)
subject: FOS: Physical sciences

description: The classical differential mixing rules are assumed to be independent effective-medium approaches, applicable to certain classes of systems. In the present work, the inconsistency of differential models for macroscopically homogeneous and isotropic systems is illustrated with a model for the effective permittivity of simple dielectric systems of impenetrable balls. The analysis is carried out in terms of the compact group approach reformulated in a way that allows one to analyze the role of different contributions to the permittivity distribution in the system. It is shown that the asymmetrical Bruggeman model (ABM) is physically inconsistent since the electromagnetic interaction between previously added constituents and those being added is replaced by the interaction of the latter with recursively formed effective medium. The overall changes in the effective permittivity due to addition of one constituent include the contributions from both constituents and depend on the system structure before the addition. Ignoring the contribution from one of the constituents, we obtain generalized versions of the original ABM mixing rules. They still remain applicable only in a certain concentration ranges, as is shown with the Hashin-Shtrikman bounds. The results obtained can be generalized to macroscopically homogeneous and isotropic systems with complex permittivities of constituents.
description: 8 pages, 2 figures
Is a doubly quantized vortex dynamically unstable in uniform superfluids?
Creators: name: Takeuchi, Hiromitsu
name: Kobayashi, Michikazu
name: Kasamatsu, Kenichi
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: Other Condensed Matter (cond-mat.other)
subject: FOS: Physical sciences

description: We revisit the fundamental problem of the splitting instability of a doubly quantized vortex in uniform single-component superfluids at zero temperature. We analyze the system-size dependence of the excitation frequency of a doubly quantized vortex through large-scale simulations of the Bogoliubov--de Gennes equation, and find that the system remains dynamically unstable even in the infinite-system-size limit. Perturbation and semi-classical theories reveal that the splitting instability radiates a damped oscillatory phonon as an opposite counterpart of a quasi-normal mode.
description: 8 pages, 6 figures
A Multi-band Study of the remarkable Jet in Quasar 4C+19.44
Creators: name: Harris, Daniel
name: Lee, Nicholas
name: Schwartz, Dan
name: Siemiginowska, Aneta
name: Massaro, Francesco
name: Birkinshaw, Mark
name: Worrall, Diana
name: Cheung, Teddy
name: Gelbord, Jonathan
name: Jorstad, Svetlana
name: Marscher, Alan
name: Landt, Hermine
name: Marshall, Herman
name: Perlman, Eric
name: Stawarz, Lukasz
name: Uchiyama, Yasunobu
name: Urry, C. Megan
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: We present arc-second-resolution data in the radio, IR, optical and X-ray for 4C+19.44 (=PKS 1354+195), the longest and straightest quasar jet with deep X-ray observations. We report results from radio images with half to one arc-second angular resolution at three frequencies, plus HST and Spitzer data. The Chandra data allow us to measure the X-ray spectral index in 10 distinct regions along the 18 arcsec jet and compare with the radio index. The radio and X-ray spectral indices of the jet regions are consistent with a value of $α=0.80$ throughout the jet, to within 2 sigma uncertainties. The X-ray jet structure to the south extends beyond the prominent radio jet and connects to the southern radio lobe, and there is extended X-ray emission in the direction of the unseen counter jet and coincident with the northern radio lobe. This jet is remarkable since its straight appearance over a large distance allows the geometry factors to be taken as fixed along the jet. Using the model of inverse Compton scattering of the cosmic microwave background (iC/CMB) by relativistic electrons, we find that the magnetic field strengths and Doppler factors are relatively constant along the jet. If instead the X-rays are synchrotron emission, they must arise from a population of electrons distinct from the particles producing the radio synchrotron spectrum.
description: Accepted for ApJ
The structure of galactic disks: Studying late-type spiral galaxies using SDSS
Creators: name: Pohlen, M.
name: Trujillo, I.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Using imaging data from the SDSS survey, we present the g' and r' radial stellar light distribution of a complete sample of ~90 face-on to intermediate inclined, nearby, late-type (Sb-Sdm) spiral galaxies. The surface brightness profiles are reliable (1sigma uncertainty less than 0.2 mag) down to mu=~27magsqarcsec. Only ~10% of all galaxies have a normal/standard purely exponential disk down to our noise limit. The surface brightness distribution of the rest of the galaxies is better described as a broken exponential. About 60% of the galaxies have a break in the exponential profile between ~1.5-4.5 times the scalelength followed by a downbending, steeper outer region. Another ~30% shows also a clear break between ~4.0-6.0 times the scalelength but followed by an upbending, shallower outer region. A few galaxies have even a more complex surface brightness distribution. The shape of the profiles correlates with Hubble type. Downbending breaks are more frequent in later Hubble types while the fraction of upbending breaks rises towards earlier types. No clear relation is found between the environment, as characterised by the number of neighbours, and the shape of the profiles of the galaxies.
description: LaTeX, 69 pages, 213 (very low resolution) figures, A&A accepted. Second version to match the accepted one including all referee's comments. Version with full resolution figures (highly recommended, but with 7.6MB) available at http://www.astro.rug.nl/~pohlen/pohlenSDSS.pdf
Modernizing the CMS software stack
Creators: name: Rodozov, Mircho Nikolaev
name: Lange, David
Publisher: name: Zenodo
Year: 2019

description: The CMS experiment relies on a substantial C++ and Python-based software release for its day-to-day production, operations and analysis needs. While very much under active development, this codebase continues to age. At the same time, CMSSW codes are likely to be used for the next two decades, in one form or another. Thus, the "cost" of bugs entering CMSSW continues to increase, both due to the increasing scale of production and analysis activities and due to the increased time to identify bugs in a legacy system. The software integration system for CMSSW must therefore continue to evolve to include modern tools, to provide developers with better information for debugging, and to give code reviewers more tools for code quality evaluation. This talk will describe the approach and results from recent changes to CMSSW including the addition of code formatting checks, the integration of accelerators into build and test procedures, and changing the CMS software base and development platform from Python2 to Python3. We will discuss the continued enhancement of the CMS continuous integration systems based on GitHub and Jenkins as well as the adoption of new code analytics tools.
Additional file 3: of Diabetes mellitus and the risk of gastrointestinal cancer in women compared with men: a meta-analysis of cohort studies
Creators: name: FANG, Hong-Juan
name: SHAN, Shao-Bo
name: ZHOU, Yu-Hao
name: ZHONG, Li-Yong
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy

description: Effect estimate of relationship between diabetes mellitus and gastrointestinal cancer in each included studies. (DOC 174 kb)
Light scalar mesons and two-kaon correlation functions
Creators: name: Achasov, N. N.
name: Kiselev, A. V.
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Experiment (hep-ex)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: It is shown that the recent data on the $K^0_S K^+$ correlation in Pb-Pb interactions agree with the data on the $γγ\toηπ^0$ and $ϕ\toηπ^0γ$ reactions and support the four-quark model of the $a_0(980)$ meson. It is shown that the data does not contradict the validity of the Gaussian assumption. The study of two-kaon correlations could provide more information about light scalar mesons after increasing the accuracy of the experimental and theoretical descriptions.
description: 12 pages, 3 figures. Updated version corresponding to PRD article
MD simulation files for: State-dependent binding of cholesterol and an anionic lipid to the muscle-type Torpedo nicotinic acetylcholine receptor
Creators: name: Ananchenko, Anna
name: Gao, Ruiyan
name: Dehez, Francois
name: Baenziger, John
Publisher: name: Zenodo
Year: 2024

description: Initial and final coordinates from all simulations described in "State-dependent binding of cholesterol and an anionic lipid to the muscle-type Torpedo nicotinic acetylcholine receptor"

Simulation input files provided for coarse-grained and atomistic simulations

Coordinate file names for coarse-grained simulations are named as follows:

[lipid composition]_[state]_r[repeat number]_CG_[initial/final].pdb, with the _initial.pdb or _final.pdb endings corresponding to initial or final coordinates respectively

Coordinate file names for atomistic simulations are named as follows:

[lipid composition]_[state]_r[repeat number]_ATOMISTIC_[initial/final].pdb, with the _initial.pdb or _final.pdb endings corresponding to initial or final coordinates respectively

production_30us_CG.mdp is the molecular dymanics input file used for all coarse-grained simulations (production run), with all simulations done using GROMACS2021.4.

production_250ns.namd is an example molecular dynamics input file used for the apo state in pure POPC simulations, however the same setting were used for all other atomistic simulation production runs. All atomistic simulations were performed using NAMD3.
Testing RIAF model for Sgr A* using the size measurements
Creators: name: Yuan, Feng
name: Shen, Zhi-Qiang
name: Huang, Lei
Publisher: name: arXiv
Year: 2006
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Recent radio observations by the VLBA at 7 and 3.5 mm produced the high-resolution images of the compact radio source located at the center of our Galaxy--Sgr A*, and detected its wavelength-dependent intrinsic sizes at the two wavelengths. This provides us with a good chance of testing previously-proposed theoretical models for Sgr A*. In this {\em Letter}, we calculate the size based on the radiatively inefficient accretion flow (RIAF) model proposed by Yuan, Quataert & Narayan (2003). We find that the predicted sizes after taking into account the scattering of the interstellar electrons are consistent with the observations. We further predict an image of Sgr A* at 1.3 mm which can be tested by future observations.
description: 10 pages, 1 figure; accepted by ApJL
Generalized Christoffel-Darboux formula for skew-orthogonal polynomials and random matrix theory
Creators: name: Ghosh, Saugata
Publisher: name: arXiv
Year: 2006
Subjects: subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: We obtain generalized Christoffel-Darboux (GCD) formula for skew-orthogonal polynomials (SOP). Using this, we present an alternative derivation of the level density and two-point function for Gaussian orthogonal ensembles (GOE) and Gaussian symplectic ensembles (GSE) of random matrices.
description: 8 pages
title: ADCO, Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Cart. 32 (G 136), 745 folios, f. 0673
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: cartulaire
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Archives départementales de la Côte-d'Or, Cart. 32 (G 136), 745 folios, f. 0673, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Archives départementales de la Côte-d'Or, Cart. 32 (G 136), 745 folios, f. 0673, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
Modularization of the LHCb software environment and preparation for heterogeneous resources
Creators: name: Couturier, Ben
name: Clemencic, Marco
Publisher: name: Zenodo
Year: 2019

description: The LHCb software stack has to be run in very different computing environments: the trigger farm at CERN, on the grid, on shared clusters, on software developer's desktops... The old model assumes the availability of CVMFS and relies on custom scripts (a.k.a LbScripts) to configure the environment to build and run the software. It lacks flexibility and does not allow, for example running in container and be very difficult to configure and run on non standard environments. This paper describes the steps taken to modularize this environment to allow for easier development and deployment (as standard python packages), but also added integration with container technology to better support non standard environments.
On the Universality of Certain Non-Renormalizable Contributions in Two-Dimensional Quantum Field Theory
Creators: name: Caselle, M.
name: Pinn, K.
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We consider the question of removing the ultraviolet cutoff in a 2D Quantum Field Theory with an interaction term which is non-renormalizable by power counting. This model arises as the first non-trivial correction beyond the Gaussian approximation of the so called Capillary Wave or Drumhead Model, and is rather important from a physical point of view since it correctly describes the finite size effects of two-dimensional interfaces. Despite the fact that the interaction is non-renormalizable, we prove that for a large class of regularization schemes the finite and divergent parts can be separated in a simple way. Furthermore, the finite part is independent of the choice of cutoff prescription used.
description: 12 pages, LaTeX file, no figures
The Environmental Impact of Lyman-break Galaxies
Creators: name: Tasker, Elizabeth J.
name: Bryan, Greg L.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We perform cosmological simulations of galaxies forming at z=3 using the hydrodynamics grid code, Enzo. By selecting the largest galaxies in the volume to correspond to Lyman-break galaxies, we construct observational spectra of the HI flux distribution around these objects, as well as column densities of CIV and OVI throughout a refined region. We successfully reproduce the most recent observations of the mean HI flux in the close vicinity of Lyman-break galaxies but see no evidence for the proximity effect in earlier observations. While our galaxies do return metals to the IGM, their quantity and volume appears to be somewhat less than observed. We conclude that either we do not adequately resolve galactic winds, or that at least some of the intergalactic metal enrichment is by early epoch objects whose mass is smaller than our minimum resolved halo mass.
description: To be published in ApJL, in press. 4 pages, 4 figures; added references to work by Ferrara to sections 1 and 3.2
Absence of Parity-Flavor Breaking Phase in QCD with two Flavors of Wilson fermions for beta greater than or equal to 5.0
Creators: name: Bitar, Khalil M.
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We present data testing the existence of a parity-flavor breaking phase in simulations of QCD with two flavors of light Wilson fermions. This is done by explicit simulations on lattice sizes of $6^4$, $8^4$ and $10^4$ for a variety of values of $β$ and $κ$ as well as the coefficient, $h$, of an explicit breaking term included in the action. We find that at $β=6/g^2 $ equal to or greater than 5.0 extrapolation in the parameter $h$ as well as in the lattice volume show no indication of a phase where parity and flavor are spontaneously broken in the limit of zero $h$.
description: 14 pages latex file with 19 figures included
Additional file 1: of Integrated genome-wide Alu methylation and transcriptome profiling analyses reveal novel epigenetic regulatory networks associated with autism spectrum disorder
Creators: name: Thanit Saeliw
name: Chayanin Tangsuwansri
name: Surangrat Thongkorn
name: Weerasak Chonchaiya
name: Suphapeetiporn, Kanya
name: Apiwat Mutirangura
name: Tewin Tencomnao
name: Hu, Valerie
name: Tewarit Sarachana
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Demographic information of LCLs used in this study. (DOC 73Â kb)
Flaring Activity of Sgr A* at 43 and 22 GHz: Evidence for Expanding Hot Plasma
Creators: name: Yusef-Zadeh, F.
name: Roberts, D.
name: Wardle, M.
name: Heinke, C. O.
name: Bower, G. C.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We have carried out Very Large Array (VLA) continuum observations to study the variability of Sgr A* at 43 GHz ($λ$=7mm) and 22 GHz ($λ$=13mm). A low level of flare activity has been detected with a duration of $\sim$ 2 hours at these frequencies, showing the peak flare emission at 43 GHz leading the 22 GHz peak flare by $\sim20$ to 40 minutes. The overall characteristics of the flare emission are interpreted in terms of the plasmon model of Van der Laan (1966) by considering the ejection and adiabatically expansion of a uniform, spherical plasma blob due to flare activity. The observed peak of the flare emission with a spectral index $ν^{-α}$ of $α$=1.6 is consistent with the prediction that the peak emission shifts toward lower frequencies in an adiabatically-expanding self-absorbed source. We present the expected synchrotron light curves for an expanding blob as well as the peak frequency emission as a function of the energy spectral index constrained by the available flaring measurements in near-IR, sub-millimeter, millimeter and radio wavelengths. We note that the blob model is consistent with the available measurements, however, we can not rule out the jet of Sgr A*. If expanding material leaves the gravitational potential of Sgr A*, the total mass-loss rate of nonthermal and thermal particles is estimated to be $\le 2\times10^{-8}$ M$_\odot$ yr$^{-1}$. We discuss the implication of the mass-loss rate since this value matches closely with the estimated accretion rate based on polarization measurements.
description: Revised with new Figures 1 and 2, 17 pages, 4 figures, ApJ (in press)
Isospectral Hamiltonians and $W_{1+\infty}$ algebra
Creators: name: Aizawa, N.
name: Sato, H. -T.
Publisher: name: arXiv
Year: 1996
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We discuss a spectrum generating algebra in the supersymmetric quantum mechanical system which is defined as a series of solutions to a specific differential equation. All Hamiltonians have equally spaced eigenvalues, and we realize both positive and negative mode generators of a subalgebra of $W_{1+\infty}$ without use of negative power of raising/lowering operators of the system. All features in the supersymmetric case are generalized to the parasupersymmetric systems of order 2.
description: 15 pages, LaTeX, one postscript figure available by request version appearing in Prog. Theore. Phys
$B$ Spectroscopy from NRQCD with Dynamical Fermions
Creators: name: Collins, S.
name: Heller, U. M.
name: Sloan, J.
name: Shigemitsu, J.
name: Khan, A. Ali
name: Davies, C.
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We present a lattice investigation, partially including the effects of dynamical quarks, of the heavy-light mesons using NRQCD for the heavy quark and the Wilson action for the light quark. We performed an extensive calculation of the spectrum employing a multi-state, multi-exponential fitting analysis which enabled us to extract the $2S{-}1S$ splitting as well as the $^1P_1{-}\bar{S}$ and hyperfine splittings. The Wilson action introduces a large systematic error into the calculation, and within this uncertainty we obtain agreement with experiment. We performed a comprehensive calculation of the heavy-light meson mass, investigating three methods and their range of validity. The agreement found between these methods confirms that Lorentz invariance can be restored at this order in NRQCD by a constant shift to all masses. We calculated spectroscopic quantities over a wide range in heavy quark mass and were able to perform a detailed investigation of heavy quark symmetry around the $b$ quark mass. In particular, we extracted the nonperturbative coefficients of terms in the heavy quark expansion of the meson binding energy. We demonstrate the importance of using tadpole-improved operators in such a calculation.
description: 34 pages, latex, 40 postscript figures
A note on the Zassenhaus product formula
Creators: name: Scholz, Daniel
name: Weyrauch, Michael
Publisher: name: arXiv
Year: 2006
Subjects: subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: We provide a simple method for the calculation of the terms c_n in the Zassenhaus product $e^{a+b}=e^a e^b \prod_{n=2}^{\infty} e^{c_n}$ for non-commuting a and b. This method has been implemented in a computer program. Furthermore, we formulate a conjecture on how to translate these results into nested commutators. This conjecture was checked up to order n=17 using a computer.
The Poet's Love(r)
Creators: name: Babb-Nelsen, Velma Rebecca
Publisher: name: Zenodo
Year: 2023

description: Since Heine and Schumann leave us with so little information about the female perspective, we opted to fill in the blanks. Rebecca Babb-Nelsen, an American soprano and poet living and working in Vienna who has degrees in German literature and vocal performance suggested imagining what the extenuating circumstances might have reasonably been for our unnamed poet's lover, and produced not only a singable English translation of Heine's original text but also poetry in the female voice which tells the story from a new angle. The project, titled The Poet's Love(r) was first presented to the class at the mdw -- University of Music and Performing Arts in Vienna. The overwhelming consensus from the group, and a pleasant realization for our trio in the course of co-creating this project, is that we all grew to understand and therefore better relate to both protagonists thanks to de-invisibilizing the female voice.

The music and poems were recorded at Hemmle Recital Hall of Texas Tech University in November 2021 and will be released in full as a commercial product (CD with booklet) at the end of 2023, along with an open access score which is currently in production. A full recital of the project is planned for March of 2024 in Vienna, Austria. All texts are printed below; both the translations of Heine's texts and original poems were written by soprano, poet and German studies scholar, Rebecca Babb-Nelsen. Several mastered audio tracks are likewise included below, featuring Eric Stokloßa (tenor), Chanda VanderHart (pianist) and Rebecca Babb-Nelsen (recitation). 

The fleshed-out story from both poet and lover is laid out below and conforms spatially in terms of chronology, indicating where both characters' experiences coincide and where they diverge.

Poem texts were then fed into the AI program Dreamer AI Art Generator, which produced a wealth of artistic responses. Some are absoultely bizarre, but many eerily accurate to the intention of the poem.
GRB 060218/SN 2006aj: A Gamma-Ray Burst and Prompt Supernova at z=0.0335
Creators: name: Mirabal, N.
name: Halpern, J. P.
name: An, D.
name: Thorstensen, J. R.
name: Terndrup, D. M.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We report the imaging and spectroscopic localization of GRB 060218 to a low-metallicity dwarf starburst galaxy at z = 0.03345 +/- 0.00006. In addition to making it the second nearest gamma-ray burst known, optical spectroscopy reveals the earliest detection of weak, supernova-like Si II near 5720 Angstroms (0.1c), starting 1.95 days after the burst trigger. UBVRI photometry obtained between 1 and 26 days post-burst confirms the early rise of supernova light, and suggests a short time delay between the gamma-ray burst and the onset of SN 2006aj if the early appearance of a soft component in the X-ray spectrum is understood as a ``shock breakout''. Together, these results verify the long-hypothesized origin of soft gamma-ray bursts in the deaths of massive stars.
description: 5 pages, 2 figures
Mapping the Free Energy of Lithium Solvation in the Protic Ionic Liquid Ethylammonuim Nitrate: A Metadynamics Study
Creators: name: Kachmar, Ali
name: Carignano, Marcelo
name: Laino, Teodoro
name: Iannuzzi, Marcella
name: Hutter, Jürg
Publisher: name: arXiv
Year: 2017
Subjects: subject: Chemical Physics (physics.chem-ph)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Understanding lithium solvation and transport in ionic liquids is important due to their possible application in electrochemical devices. Using first-principles simulations aided by a metadynamics approach we study the free-energy landscape for lithium ions at infinite dilution in ethylammonium nitrate, a protic ionic liquid. We analyze the local structure of the liquid around the lithium cation and obtain a quantitative picture in agreement with experimental findings. Our simulations show that the lowest two free energy minima correspond to conformations with the lithium ion being solvated either by three or four nitrate ions with a transition barrier between them of 0.2 \eV. Other less probable conformations having different solvation pattern are also investigated.
Quantum Spin Systems after DLS1978
Creators: name: Nachtergaele, Bruno
Publisher: name: arXiv
Year: 2006
Subjects: subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences
subject: 82B10; 82B20

description: In their 1978 paper, Dyson, Lieb, and Simon (DLS) proved the existence of Ne'el order at positive temperature for the spin-S Heisenberg antiferromagnet on the d-dimensional hypercubic lattice when either S >= 1 and d >= 3 or S=1/2 and d is sufficiently large. This was the first proof of spontaneous breaking of a continuous symmetry in a quantum model at finite temperature. Since then the ideas of DLS have been extended and adapted to a variety of other problems. In this paper I will present an overview of the most important developments in the study of the Heisenberg model and related quantum lattice systems since 1978, including but not restricted to those directly related to the paper by DLS.
description: Dedicated to Barry Simon and to appear in a festschrift on the occasion of his 60th birthday. v2: corrected typos and references
Lattice Operators for Moments of the Structure Functions and their Transformation under the Hypercubic Group
Creators: name: Goeckeler, M.
name: Horsley, R.
name: Ilgenfritz, E. -M.
name: Perlt, H.
name: Rakow, P.
name: Schierholz, G.
name: Schiller, A.
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: For lattice operators that are relevant to the calculation of moments of nucleon structure functions we investigate the transformation properties under the hypercubic group. We give explicit bases of irreducible subspaces for tensors of rank up to 4.
description: 22 pages, LaTeX, no figures
Combinatorial point for higher spin loop models
Creators: name: Zinn-Justin, P.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Mathematical Physics (math-ph)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Combinatorics (math.CO)
subject: Exactly Solvable and Integrable Systems (nlin.SI)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: Integrable loop models associated with higher representations (spin k/2) of U_q(sl(2)) are investigated at the point q=-e^{iπ/(k+2)}. The ground state eigenvalue and eigenvectors are described. Introducing inhomogeneities into the models allows to derive a sum rule for the ground state entries.
description: latest version adds some references
The Probability of Causation
Creators: name: Dawid, Philip
name: Musio, Monica
name: Murtas, Rossella
Publisher: name: arXiv
Year: 2017
Subjects: subject: Statistics Theory (math.ST)
subject: Methodology (stat.ME)
subject: FOS: Mathematics
subject: FOS: Computer and information sciences
subject: 62A01

description: Many legal cases require decisions about causality, responsibility or blame, and these may be based on statistical data. However, causal inferences from such data are beset by subtle conceptual and practical difficulties, and in general it is, at best, possible to identify the "probability of causation" as lying between certain empirically informed limits. These limits can be refined and improved if we can obtain additional information, from statistical or scientific data, relating to the internal workings of the causal processes. In this paper we review and extend recent work in this area, where additional information may be available on covariate and/or mediating variables.
description: 14 pages, 2 tables, 7 figures
Additional file 2: of Diabetes mellitus and the risk of gastrointestinal cancer in women compared with men: a meta-analysis of cohort studies
Creators: name: FANG, Hong-Juan
name: SHAN, Shao-Bo
name: ZHOU, Yu-Hao
name: ZHONG, Li-Yong
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Biotechnology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy

description: STATA program for calculate the ratio of relative risk. (DOC 37 kb)
Additional file 1: of RNA-Seq reveals the existence of a CDKN1C-E2F1-TP53 axis that is altered in human T-cell lymphoblastic lymphomas
Creators: name: López-Nieva, Pilar
name: Fernández-Navarro, Pablo
name: Vaquero-Lorenzo, Concepción
name: Villa-Morales, María
name: Graña-Castro, Osvaldo
name: Cobos-Fernández, María
name: López-Lorenzo, José
name: Llamas, Pilar
name: González-Sanchez, Laura
name: Sastre, Isabel
name: Pollan, Marina
name: Malumbres, Marcos
name: Santos, Javier
name: Fernández-Piqueras, José
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Hematology

description: Table S1. Characterization of the human sample collection in the exploratory cohort. Lymphomas were diagnosed (see Characterization column) according to World Health Organization Classification of Hematological Malignancies and recommendations from the European. (PDF 205 kb)
Persistent Patterns in Accretion Disks
Creators: name: Amin, Mustafa A.
name: Frolov, Andrei V.
Publisher: name: arXiv
Year: 2006
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present a set of new characteristic frequencies associated with accretion disks around compact objects. These frequencies arise from persistent rotating patterns in the disk that are finite in radial extent and driven purely by the gravity of the central body. Their existence depends on general relativistic corrections to orbital motion and, if observed, could be used to probe the strong gravity region around a black hole. We also discuss a possible connection to the puzzle of quasi-periodic oscillations.
description: 4 pages, 5 figures; MNLaTeX 2.2
Additional file 2 of Users’ experiences with an interactive Evidence to Decision (iEtD) framework: a qualitative analysis
Creators: name: Meneses-Echavez, Jose Francisco
name: Rosenbaum, Sarah
name: Rada, Gabriel
name: Flottorp, Signe
name: Moberg, Jenny
name: Alonso-Coello, Pablo
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Cancer
subject: Science Policy

description: Additional file 2.
Professional Identity and Integrity: SETs’ Perspectives on Pedagogy and Practice
Creators: name: Colvin, Kimberly F
name: Ellis-Robinson, Tammy
Publisher: name: OSF Registries
Year: 2024
Subjects: subject: Education
subject: special education teacher identity

description: Through a series of interviews of three special educators, conducted over a year and a half, we gathered information about their experiences, their sense of integrity, and its relationship to the ethics of the profession at the personal, school, and district level. Interview data offered insight on the dynamic professional special educator teacher identity as it relates to a systems model of identity development. The interviewees were selected from special educators who had responded to a survey about their practices during the COVID pandemic. Findings have implication for professional development, teacher preparation, and policy in special education.
Entangling distant solid-state spins via thermal phonons
Creators: name: Cao, Puhao
name: Betzholz, Ralf
name: Zhang, Shaoliang
name: Cai, Jianming
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Physics (quant-ph)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: The implementation of quantum entangling gates between qubits is essential to achieve scalable quantum computation. Here, we propose a robust scheme to realize an entangling gate for distant solid-state spins via a mechanical oscillator in its thermal equilibrium state. By appropriate Hamiltonian engineering and usage of a protected subspace, we show that the proposed scheme is able to significantly reduce the thermal effect of the mechanical oscillator on the spins. In particular, we demonstrate that a high entangling gate fidelity can be achieved even for a relatively high thermal occupation. Our scheme can thus relax the requirement for ground-state cooling of the mechanical oscillator, and may find applications in scalable quantum information processing in hybrid solid-state architectures.
description: 11 pages, 4 figures
Additional file 1: of Diabetes mellitus and the risk of gastrointestinal cancer in women compared with men: a meta-analysis of cohort studies
Creators: name: FANG, Hong-Juan
name: SHAN, Shao-Bo
name: ZHOU, Yu-Hao
name: ZHONG, Li-Yong
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Science Policy

description: Newcastleâ Ottawa scale for quality assessment of the included studies. (DOC 99 kb)
Light hadron masses with a tadpole-improved next-nearest-neighbour lattice fermion action
Creators: name: Fiebig, H. R.
name: Woloshyn, R. M.
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: Calculations of hadron masses are done in quenched approximation using gauge field and fermion actions which are both corrected for discretization errors to $O(a^2)$ at the classical level and which contain tadpole improvement factors. The fermion action has both nearest-neighbour and next-nearest-neighbour couplings in the kinetic and Wilson terms. Simulations done at lattice spacings of $0.27$ and $0.4$fm yield hadron masses which are already quite close to experimental values. The results are compared to Wilson action calculations done at comparable lattice spacings.
description: 18 pages, 3 postscript figures, revised May 1996
Edge stacking dislocations in two-dimensional bilayers with a small lattice mismatch
Creators: name: Lebedeva, Irina V.
name: Knizhnik, Andrey A.
name: Popov, Andrey M.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Incomplete stacking dislocations are predicted to form at edges of the shorter upper layer in two-dimensional hexagonal bilayers upon stretching the longer bottom layer. A concept of the edge Burgers vector is introduced to describe such dislocations by analogy with the Burgers vector of standard bulk dislocations. Analytical solutions for the structure and energy of edge stacking dislocations in bilayer graphene are obtained depending on the magnitude of elongation and angles between the edge Burgers vector, direction of elongation and edge. The barrier for penetration of stacking dislocations inside the bilayer is estimated. The possibilities to measure the barrier to relative motion of graphene layers and strain of graphene on a substrate by observation of edge stacking dislocations are discussed.
description: 8 pages, 6 figures