cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Shared learning of powertrain control policies for vehicle fleets
Creators: name: Kerbel, Lindsey
name: Ayalew, Beshah
name: Ivanco, Andrej
Publisher: name: arXiv
Year: 2024
Subjects: subject: Systems and Control (eess.SY)
subject: Artificial Intelligence (cs.AI)
subject: Machine Learning (cs.LG)
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: FOS: Computer and information sciences

description: Emerging data-driven approaches, such as deep reinforcement learning (DRL), aim at on-the-field learning of powertrain control policies that optimize fuel economy and other performance metrics. Indeed, they have shown great potential in this regard for individual vehicles on specific routes or drive cycles. However, for fleets of vehicles that must service a distribution of routes, DRL approaches struggle with learning stability issues that result in high variances and challenge their practical deployment. In this paper, we present a novel framework for shared learning among a fleet of vehicles through the use of a distilled group policy as the knowledge sharing mechanism for the policy learning computations at each vehicle. We detail the mathematical formulation that makes this possible. Several scenarios are considered to analyze the functionality, performance, and computational scalability of the framework with fleet size. Comparisons of the cumulative performance of fleets using our proposed shared learning approach with a baseline of individual learning agents and another state-of-the-art approach with a centralized learner show clear advantages to our approach. For example, we find a fleet average asymptotic improvement of 8.5 percent in fuel economy compared to the baseline while also improving on the metrics of acceleration error and shifting frequency for fleets serving a distribution of suburban routes. Furthermore, we include demonstrative results that show how the framework reduces variance within a fleet and also how it helps individual agents adapt better to new routes.
Additional file 1: of MicroRNA based Pan-Cancer Diagnosis and Treatment Recommendation
Creators: name: Cheerla, Nikhil
name: Gevaert, Olivier
Publisher: name: Figshare
Year: 2017
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: This is a word document that contains a subset of unique treatments generated by the cox scaling method. (DOCX 14 kb)
Criotettix latifrons Hebard 1930
Creators: name: Hollier, John
name: Heads, Sam W.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Tetrigidae
Criotettix
Criotettix latifrons

description: latifrons Hebard, 1930: 578 [Criotettix].
One ♂ paratype. The holotype is in the ANSP.
Criotettix latifrons Hebard, 1930
description: Published as part of Hollier, John & Heads, Sam W., 2014, The type specimens of Orthoptera described by American entomologists in the collection of the Muséum d'histoire naturelle de Genève, pp. 63-76 in Revue suisse de Zoologie 121 (1) on page 71, DOI: 10.5281/zenodo.5822978
Additional file 1: of MicroRNA based Pan-Cancer Diagnosis and Treatment Recommendation
Creators: name: Cheerla, Nikhil
name: Gevaert, Olivier
Publisher: name: Figshare
Year: 2017
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences

description: This is a word document that contains a subset of unique treatments generated by the cox scaling method. (DOCX 14 kb)
Paratettix argillaceus
Creators: name: Hollier, John
name: Heads, Sam W.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Tetrigidae
Paratettix
Paratettix argillaceus

description: longipennis mutabilis Hancock, 1909: 413 [Tetrix].
One ♂ paralectotype. The specimen has been labelled as “longipennis dimorpha Hancock” by Hebard, but the locality “ Victoria Australia ” agrees with that given by Hancock in his description of the variety of T. longipennis. The ♂ lectotype (designated by Key, 1981: 51), is in the OXUM.
A junior synonym of Paratettix argillaceus (Erichson, 1842)
description: Published as part of Hollier, John & Heads, Sam W., 2014, The type specimens of Orthoptera described by American entomologists in the collection of the Muséum d'histoire naturelle de Genève, pp. 63-76 in Revue suisse de Zoologie 121 (1) on page 71, DOI: 10.5281/zenodo.5822978
Additional file 2: of Polymorphisms in the canine monoamine oxidase a (MAOA) gene: identification and variation among five broad dog breed groups
Creators: name: Sacco, James
name: Ruplin, Andrew
name: Skonieczny, Paul
name: Ohman, Michael
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biophysics
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Wolf, coyote and golden jackal sequence read archive (SRA) sequences used to compare with homologous sequences in domestic dogs. (DOCX 12Â kb)
Creating greener software
Creators: name: Olivier, Enrico
Publisher: name: Zenodo
Year: 2024
Subjects: rse

description: Green computing is a very broad term encompassing endeavours such as the development and use of energy efficient hardware, the powering of computing infrastructure with renewable energy sources, the repurposing and recycling of computing assets, to extracting benefit from the excess heat produced by HPC systems for example.
On the software side there are decisions a software engineer can make to create software that is more environmentally friendly. These decisions relate to various aspects of the software engineering process such as design and coding choices, choice of programming language, as well as monitoring and testing. 
Highlighted here are some practical and general considerations to employ during the development cycle that can help lead to more energy efficient software. For illustrative purposes a comparison of the energy efficiency of some coding test cases is also presented.
A recording of this session is available on YouTube: https://youtu.be/MjhhCI0GOU8
MOESM3 of Ovarian cancer: density equalizing mapping of the global research architecture
Creators: name: DĂśrthe BrĂźggmann
name: Pulch, Katharina
name: KlingelhĂśfer, Doris
name: Pearce, Celeste
name: Groneberg, David
Publisher: name: Figshare
Year: 2017
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Neuroscience
subject: Evolutionary Biology
subject: Developmental Biology
subject: Cancer
subject: Science Policy

description: Additional file 3: Table S1. Most publishing journals with number of articles, number of citations and citation rate.
Polysphincta rufipes Gravenhorst 1829
Creators: name: Varga, Oleksandr
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Ichneumonidae
Polysphincta
Polysphincta rufipes

description: Polysphincta rufipes Gravenhorst, 1829
Records. Ukraine (Kasparyan, 1981), Transcarpathian Region (Varga, 2018b).
Material examined. Cherkasy Reg.: 11 ♀, 2 ♂, Zolotonosha Distr., Chekhivka, SN, 22.viii.1984, leg. V. Tolkanitz; 1 ♀, Kaniv Distr., Lukovytsya, SN, 5.vi.1999, leg. A. Kotenko; Odesa Reg.: 1 ♀, Vylkove, SN, 31.v.1980, leg. M. Nesterov; 1 ♂, Tatarbunary, SN, 7.vi.1983; 1 ♀, Danube BR, Prymorske, SN, 12–14.ix.1995; Poltava Reg.: 1 ♀, Myrgorod, Ostriv, SN, 30.viii.1984, leg. A. Kotenko; Volyn Reg.: 1 ♀, Vetly, SN, 10.vi.1977, leg. V. Odnosum; 1 ♀, Zalysytsya, E bank of Lake Orikhove, SN, 8.viii.1998, leg. A. Kotenko.
Distribution. Palaearctic; Ukraine: Cherkasy, Odesa, Poltava, Transcarpathian, and Volyn Regs.
Biology. CMF, CEMF, EEFS, PS. May–September.
description: Published as part of Varga, Oleksandr, 2019, Taxonomy and distribution of pimpline parasitoids (Hymenoptera, Ichneumonidae, Pimplinae) in Ukraine, pp. 1-65 in Zootaxa 4693 (1) on page 28, DOI: 10.11646/zootaxa.4693.1.1, http://zenodo.org/record/3529018
MOESM5 of Ovarian cancer: density equalizing mapping of the global research architecture
Creators: name: DĂśrthe BrĂźggmann
name: Pulch, Katharina
name: KlingelhĂśfer, Doris
name: Pearce, Celeste
name: Groneberg, David
Publisher: name: Figshare
Year: 2017
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy

description: Additional file 5: Table S2. Most cited articles with country of origin, number of citations and journal.
Amphibotettix longipes Hancock 1906
Creators: name: Hollier, John
name: Heads, Sam W.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Tetrigidae
Amphibotettix
Amphibotettix longipes

description: longipes Hancock, 1906: 87 [Amphibotettix].
One ♂ and one ♀ syntype. There is at least one other syntype, referred to as the holotype by Eades et al. (2013), in the ANSP.
Amphibotettix longipes Hancock, 1906
description: Published as part of Hollier, John & Heads, Sam W., 2014, The type specimens of Orthoptera described by American entomologists in the collection of the Muséum d'histoire naturelle de Genève, pp. 63-76 in Revue suisse de Zoologie 121 (1) on page 71, DOI: 10.5281/zenodo.5822978
Additional file 3: Table S5. of Widespread introgression in deep-sea hydrothermal vent mussels
Creators: name: Breusing, Corinna
name: Vrijenhoek, Robert
name: Reusch, Thorsten
Publisher: name: Figshare
Year: 2017
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: Ecology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: 60506 Virology
subject: Computational Biology

description: Genotype frequencies in the HYBRIDLAB data set as inferred by STRUCTURE, INTROGRESS and NEWHYBRIDS. For the NEWHYBRIDS program the mean assignment probability (as proportion) of the chosen genotype category is given, where numbers in brackets give the sample sizes (N) that were used for averaging. (DOCX 28 kb)
Additional file 3: of Learning global health: a pilot study of an online collaborative intercultural peer group activity involving medical students in Australia and Indonesia
Creators: name: Ambrose, Mark
name: Murray, Linda
name: Handoyo, Nicholas
name: Deif Tunggal
name: Cooling, Nick
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: List of topics for peer group discussion. (DOCX 16Â kb)
Additional file 1: Table S1. of Widespread introgression in deep-sea hydrothermal vent mussels
Creators: name: Breusing, Corinna
name: Vrijenhoek, Robert
name: Reusch, Thorsten
Publisher: name: Figshare
Year: 2017
Subjects: subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Bathymodiolus sampling localities along the Mid-Atlantic Ridge. (DOCX 17 kb)
Additional file 1: of Learning global health: a pilot study of an online collaborative intercultural peer group activity involving medical students in Australia and Indonesia
Creators: name: Ambrose, Mark
name: Murray, Linda
name: Handoyo, Nicholas
name: Deif Tunggal
name: Cooling, Nick
Publisher: name: Figshare
Year: 2017
Subjects: subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Pre-RIPPLE student survey. (DOCX 72Â kb)
Otumba marcapata Hancock 1907
Creators: name: Hollier, John
name: Heads, Sam W.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Tetrigidae
Otumba
Otumba marcapata

description: marcapata Hancock, 1907b: 44 [Otumba].
One ♂ and two ♀ syntypes. There is at least one other syntype, referred to as the holotype by Eades et al. (2013), in the ANSP.
Otumba marcapata Hancock, 1907
description: Published as part of Hollier, John & Heads, Sam W., 2014, The type specimens of Orthoptera described by American entomologists in the collection of the Muséum d'histoire naturelle de Genève, pp. 63-76 in Revue suisse de Zoologie 121 (1) on page 71, DOI: 10.5281/zenodo.5822978
Additional file 3: Table S5. of Widespread introgression in deep-sea hydrothermal vent mussels
Creators: name: Breusing, Corinna
name: Vrijenhoek, Robert
name: Reusch, Thorsten
Publisher: name: Figshare
Year: 2017
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: Ecology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Virology
subject: Computational Biology

description: Genotype frequencies in the HYBRIDLAB data set as inferred by STRUCTURE, INTROGRESS and NEWHYBRIDS. For the NEWHYBRIDS program the mean assignment probability (as proportion) of the chosen genotype category is given, where numbers in brackets give the sample sizes (N) that were used for averaging. (DOCX 28 kb)
Additional file 2: of Learning global health: a pilot study of an online collaborative intercultural peer group activity involving medical students in Australia and Indonesia
Creators: name: Ambrose, Mark
name: Murray, Linda
name: Handoyo, Nicholas
name: Deif Tunggal
name: Cooling, Nick
Publisher: name: Figshare
Year: 2017
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy

description: Post-RIPPLE student survey. (DOCX 15Â kb)
Additional file 2: Figure S3. of Anti-allodynic effect of Buja in a rat model of oxaliplatin-induced peripheral neuropathy via spinal astrocytes and pro-inflammatory cytokines suppression
Creators: name: Yongjae Jung
name: Lee, Ji
name: Woojin Kim
name: Yoon, Sang
name: Kim, Sun
Publisher: name: Figshare
Year: 2017
Subjects: subject: Cell Biology
subject: Neuroscience
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Representative co-immunolabeling image of GFAP and Iba-1 positive cells in the spinal dorsal horn. Co-immunolabeling in the same section showed the spatially different distribution of astrocytes (GFAP-positive cells) and microglia (Iba-1 positive cells) in the spinal dorsal horn (a). Separated images for astrocytes (b) and microglia (c) were also presented, respectively. (PDF 236 kb)
Additional file 1: Table S1. of Implementation of short incubation MALDI-TOF MS identification from positive blood cultures in routine diagnostics and effects on empiric antimicrobial therapy
Creators: name: Köck, Robin
name: Wüllenweber, Jörg
name: Horn, Dagmar
name: Lanckohr, Christian
name: Becker, Karsten
name: Idelevich, Evgeny
Publisher: name: Figshare
Year: 2017
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Evaluation of adjustments of antibiotic therapies made by clinicians directly after species identification and before availability of an antibiogram. (DOC 55 kb)
Additional file 1: Table S1. of Implementation of short incubation MALDI-TOF MS identification from positive blood cultures in routine diagnostics and effects on empiric antimicrobial therapy
Creators: name: Köck, Robin
name: Wüllenweber, Jörg
name: Horn, Dagmar
name: Lanckohr, Christian
name: Becker, Karsten
name: Idelevich, Evgeny
Publisher: name: Figshare
Year: 2017
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology
subject: Computational Biology

description: Evaluation of adjustments of antibiotic therapies made by clinicians directly after species identification and before availability of an antibiogram. (DOC 55 kb)
Reliable Student: Addressing Noise in Semi-Supervised 3D Object Detection
Creators: name: Nozarian, Farzad
name: Agarwal, Shashank
name: Rezaeianaran, Farzaneh
name: Shahzad, Danish
name: Poibrenski, Atanas
name: Müller, Christian
name: Slusallek, Philipp
Publisher: name: arXiv
Year: 2024
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Machine Learning (cs.LG)
subject: FOS: Computer and information sciences

description: Semi-supervised 3D object detection can benefit from the promising pseudo-labeling technique when labeled data is limited. However, recent approaches have overlooked the impact of noisy pseudo-labels during training, despite efforts to enhance pseudo-label quality through confidence-based filtering. In this paper, we examine the impact of noisy pseudo-labels on IoU-based target assignment and propose the Reliable Student framework, which incorporates two complementary approaches to mitigate errors. First, it involves a class-aware target assignment strategy that reduces false negative assignments in difficult classes. Second, it includes a reliability weighting strategy that suppresses false positive assignment errors while also addressing remaining false negatives from the first step. The reliability weights are determined by querying the teacher network for confidence scores of the student-generated proposals. Our work surpasses the previous state-of-the-art on KITTI 3D object detection benchmark on point clouds in the semi-supervised setting. On 1% labeled data, our approach achieves a 6.2% AP improvement for the pedestrian class, despite having only 37 labeled samples available. The improvements become significant for the 2% setting, achieving 6.0% AP and 5.7% AP improvements for the pedestrian and cyclist classes, respectively.
description: Accepted at CVPR Workshop L3D-IVU 2023. Code: https://github.com/fnozarian/ReliableStudent
Additional file 2: of Association between diabetes mellitus and multi-drug-resistant tuberculosis: a protocol for a systematic review and meta-analysis
Creators: name: Balewgizie Tegegne
name: Tesfa Habtewold
name: Melkamu Mengesha
name: Burgerhof, Johannes
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Science Policy
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Search strings used and number of identified literature per database. (DOCX 15 kb)
Paratettix azetcus
Creators: name: Hollier, John
name: Heads, Sam W.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Tetrigidae
Paratettix
Paratettix azetcus

description: minutus Hancock, 1902: 134 [Paratettix].
One ♂ syntype. There is at least one other syntype in the ANSP.
A junior synonym of Paratettix azetcus (Saussure, 1861)
description: Published as part of Hollier, John & Heads, Sam W., 2014, The type specimens of Orthoptera described by American entomologists in the collection of the Muséum d'histoire naturelle de Genève, pp. 63-76 in Revue suisse de Zoologie 121 (1) on page 72, DOI: 10.5281/zenodo.5822978
Additional file 2: of Efficacy of gabapentin for prevention of postherpetic neuralgia: study protocol for a randomized controlled clinical trial
Creators: name: Rullán, Manuel
name: Bulilete, Oana
name: Leiva, Alfonso
name: Soler, Aina
name: Roca, Antonia
name: González-Bals, María
name: Lorente, Patricia
name: Llobera, Joan
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: Science Policy

description: Model consent form. (DOC 38 kb)
Eucriotettix magnus
Creators: name: Hollier, John
name: Heads, Sam W.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Tetrigidae
Eucriotettix
Eucriotettix magnus

description: oculatus magnus Hancock, 1907a: 221 [Criotettix].
One ♀ syntype. There is at least one other syntype, referred to as the holotype by Eades et al. (2013), in the ANSP.
Eucriotettix magnus (Hancock, 1907)
description: Published as part of Hollier, John & Heads, Sam W., 2014, The type specimens of Orthoptera described by American entomologists in the collection of the Muséum d'histoire naturelle de Genève, pp. 63-76 in Revue suisse de Zoologie 121 (1) on page 72, DOI: 10.5281/zenodo.5822978
Additional file 7: Figure S7. of Glycine-alanine dipeptide repeat protein contributes to toxicity in a zebrafish model of C9orf72 associated neurodegeneration
Creators: name: Ohki, Yu
name: Wenninger-Weinzierl, Andrea
name: Hruscha, Alexander
name: Asakawa, Kazuhide
name: Kawakami, Koichi
name: Haass, Christian
name: Edbauer, Dieter
name: Schmid, Bettina
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Construction of repeat expressing plasmid in zebrafish. A representative scheme to generate the 80xggggcc repeat containing plasmid. (PDF 1457Â kb)
Additional file 7: Figure S7. of Glycine-alanine dipeptide repeat protein contributes to toxicity in a zebrafish model of C9orf72 associated neurodegeneration
Creators: name: Ohki, Yu
name: Wenninger-Weinzierl, Andrea
name: Hruscha, Alexander
name: Asakawa, Kazuhide
name: Kawakami, Koichi
name: Haass, Christian
name: Edbauer, Dieter
name: Schmid, Bettina
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Construction of repeat expressing plasmid in zebrafish. A representative scheme to generate the 80xggggcc repeat containing plasmid. (PDF 1457Â kb)
Maximizing Patch Coverage for Testing of Highly-Configurable Software without Exploding Build Times
Creators: name: Yıldıran, Necip Fazıl
name: Oh, Jeho
name: Lawall, Julia
name: Gazzillo, Paul
Publisher: name: arXiv
Year: 2024
Subjects: subject: Software Engineering (cs.SE)
subject: FOS: Computer and information sciences

description: The Linux kernel is highly-configurable, with a build system that takes a configuration file as input and automatically tailors the source code accordingly. Configurability, however, complicates testing, because different configuration options lead to the inclusion of different code fragments. With thousands of patches received per month, Linux kernel maintainers employ extensive automated continuous integration testing. To attempt patch coverage, i.e., taking all changed lines into account, current approaches either use configuration files that maximize total statement coverage or use multiple randomly-generated configuration files, both of which incur high build times without guaranteeing patch coverage. To achieve patch coverage without exploding build times, we propose krepair, which automatically repairs configuration files that are fast-building but have poor patch coverage to achieve high patch coverage with little effect on build times. krepair works by discovering a small set of changes to a configuration file that will ensure patch coverage, preserving most of the original configuration file's settings. Our evaluation shows that, when applied to configuration files with poor patch coverage on a statistically-significant sample of recent Linux kernel patches, krepair achieves nearly complete patch coverage, 98.5% on average, while changing less than 1.53% of the original default configuration file in 99% of patches, which keeps build times 10.5x faster than maximal configuration files.
Euparatettix similis Hancock 1907
Creators: name: Hollier, John
name: Heads, Sam W.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Tetrigidae
Euparatettix
Euparatettix similis

description: similis Hancock, 1907a: 238 [Euparatettix].
One ♀ syntype. There is at least one other syntype, referred to as the holotype by Eades et al. (2013), in the ANSP.
Euparatettix similis Hancock, 1907
description: Published as part of Hollier, John & Heads, Sam W., 2014, The type specimens of Orthoptera described by American entomologists in the collection of the Muséum d'histoire naturelle de Genève, pp. 63-76 in Revue suisse de Zoologie 121 (1) on page 72, DOI: 10.5281/zenodo.5822978
Additional file 1: Figure S1. of Glycine-alanine dipeptide repeat protein contributes to toxicity in a zebrafish model of C9orf72 associated neurodegeneration
Creators: name: Ohki, Yu
name: Wenninger-Weinzierl, Andrea
name: Hruscha, Alexander
name: Asakawa, Kazuhide
name: Kawakami, Koichi
name: Haass, Christian
name: Edbauer, Dieter
name: Schmid, Bettina
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Developmental Biology
subject: Cancer

description: RNA foci formation overview. Embryos of the indicated genotypes stained with a Cy3-labeled probe to visualize RNA foci formation by in situ hybridization. Between 13–33 cells per field of view showed RNA foci in the GA80-GFP larvae. All images were taken without DAPI fluorescence. Scale bar 10 μm. (PDF 2702 kb)
Eucriotettix spinilobus
Creators: name: Hollier, John
name: Heads, Sam W.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Tetrigidae
Eucriotettix
Eucriotettix spinilobus

description: spinilobus Hancock, 1904: 129 [Criotettix].
One ♀ syntype. There is at least one other syntype, referred to as the holotype by Eades et al. (2013), in the ANSP.
Eucriotettix spinilobus (Hancock, 1904)
description: Published as part of Hollier, John & Heads, Sam W., 2014, The type specimens of Orthoptera described by American entomologists in the collection of the Muséum d'histoire naturelle de Genève, pp. 63-76 in Revue suisse de Zoologie 121 (1) on page 72, DOI: 10.5281/zenodo.5822978
rOpenSci Statistical Software Peer Review: The importance and challenge of community engagement.
Creators: name: Padgham, Mark
name: Ross, Noam
Publisher: name: Zenodo
Year: 2024
Subjects: rse

description: Research software is commonly developed by an internal "core" set of people, and often funded by grants with defined end dates.  Research software which survives often does so through being adopted and maintained by broader communities beyond that initial core.  Community engagement is thus vital to the success of research software.  rOpenSci is an organization dedicated to "*Transforming science through open data, software & reproducibility*," and does so through actively nurturing a large and diverse community of research software authors and users.  One of our primary activities is peer review for software in the R computer language, which has been running for almost 10 years.  A recent large, multi-year project expanded the scope of peer review to include statistical software, the primary focus of the R language itself.  This project was led and coordinated by our own core set of rOpenSci people, resulting in a comprehensive system for documenting and assessing statistical software.  As with research software, we will best ensure the long-term survival and relevance of our system through fostering a transition towards community-led maintenance.  This talk will describe challenges and successes in our efforts to engage and expand our community to support our statistical software system, and will draw important parallels with the abiding importance of community engagement in research software development.
A recording of this session is available on YouTube: https://youtu.be/7H4FCpZa3w8
Misythus tectatus Hebard 1923
Creators: name: Hollier, John
name: Heads, Sam W.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Tetrigidae
Misythus
Misythus tectatus

description: tectatus Hebard, 1923a: 350 [Misythus].
One ♀ paratype. The holotype is in the ANSP.
Misythus tectatus Hebard, 1923
description: Published as part of Hollier, John & Heads, Sam W., 2014, The type specimens of Orthoptera described by American entomologists in the collection of the Muséum d'histoire naturelle de Genève, pp. 63-76 in Revue suisse de Zoologie 121 (1) on page 72, DOI: 10.5281/zenodo.5822978
Additional file 5: Figure S5. of Glycine-alanine dipeptide repeat protein contributes to toxicity in a zebrafish model of C9orf72 associated neurodegeneration
Creators: name: Ohki, Yu
name: Wenninger-Weinzierl, Andrea
name: Hruscha, Alexander
name: Asakawa, Kazuhide
name: Kawakami, Koichi
name: Haass, Christian
name: Edbauer, Dieter
name: Schmid, Bettina
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Vascular patterning is not affected. The vasculature was analyzed by incrossing with Tg(kdrl:HsHRAS-mCherry)s896 into the GA80-GFP expressing lines. mCherry expressed from the Tg(kdrl:HsHRAS-mCherry)s896 transgene is shown in Ga80-GFP-a transgenic zebrafish not expressing GFP (A) and siblings expressing GFP (B) at 2.5 dpf. Scale bar 20 μm. (PDF 4003 kb)
Polysphincta tuberosa Gravenhorst 1829
Creators: name: Varga, Oleksandr
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Ichneumonidae
Polysphincta
Polysphincta tuberosa

description: Polysphincta tuberosa Gravenhorst, 1829
Records. Ukraine (Kasparyan, 1981), Ivano-Frankivsk and Transcarpathian Regions (Varga, 2018b).
Material examined. Kharkiv Reg.: 2 ♀, Vovchansk Distr., Bochkove, SN, 26.vii.1984; Transcarpathian Reg.: 1 ♀, Rakhiv, SN, 2.viii.1994, leg. A. Kotenko.
Distribution. Holarctic; Ukraine: Ivano-Frankivsk, Kharkiv and Transcarpathian Regs.
Biology. CMF, EEFS. June–October.
description: Published as part of Varga, Oleksandr, 2019, Taxonomy and distribution of pimpline parasitoids (Hymenoptera, Ichneumonidae, Pimplinae) in Ukraine, pp. 1-65 in Zootaxa 4693 (1) on page 28, DOI: 10.11646/zootaxa.4693.1.1, http://zenodo.org/record/3529018
Euparatettix variabilis
Creators: name: Hollier, John
name: Heads, Sam W.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Tetrigidae
Euparatettix
Euparatettix variabilis

description: tenuis Hancock, 1912: 153 [Euparatettix].
Two ♂ and three ♀ syntypes. There is at least one other syntype, referred to as the holotype by Eades et al. (2013), in the ANSP.
A junior synonym of Euparatettix variabilis (Bolivar, 1887)
description: Published as part of Hollier, John & Heads, Sam W., 2014, The type specimens of Orthoptera described by American entomologists in the collection of the Muséum d'histoire naturelle de Genève, pp. 63-76 in Revue suisse de Zoologie 121 (1) on page 72, DOI: 10.5281/zenodo.5822978
Additional file 5: Figure S5. of Glycine-alanine dipeptide repeat protein contributes to toxicity in a zebrafish model of C9orf72 associated neurodegeneration
Creators: name: Ohki, Yu
name: Wenninger-Weinzierl, Andrea
name: Hruscha, Alexander
name: Asakawa, Kazuhide
name: Kawakami, Koichi
name: Haass, Christian
name: Edbauer, Dieter
name: Schmid, Bettina
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences

description: Vascular patterning is not affected. The vasculature was analyzed by incrossing with Tg(kdrl:HsHRAS-mCherry)s896 into the GA80-GFP expressing lines. mCherry expressed from the Tg(kdrl:HsHRAS-mCherry)s896 transgene is shown in Ga80-GFP-a transgenic zebrafish not expressing GFP (A) and siblings expressing GFP (B) at 2.5 dpf. Scale bar 20 μm. (PDF 4003 kb)
Aphemogryllus gracilis Rehn 1918
Creators: name: Hollier, John
name: Heads, Sam W.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Gryllidae
Aphemogryllus
Aphemogryllus gracilis

description: gracilis Rehn, 1918: 210 [Aphemogryllus].
One ♀ paratype. The holotype is in the ANSP.
Aphemogryllus gracilis Rehn, 1918
description: Published as part of Hollier, John & Heads, Sam W., 2014, The type specimens of Orthoptera described by American entomologists in the collection of the Muséum d'histoire naturelle de Genève, pp. 63-76 in Revue suisse de Zoologie 121 (1) on page 72, DOI: 10.5281/zenodo.5822978
Additional file 1: of Geographic variation in selected hospital procedures and services in the Israeli health care system
Creators: name: Mendlovic, Joseph
name: Ethel-Sherry Gordon
name: Ziona Haklai
name: Meron, Jill
name: Afek, Arnon
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Molecular Biology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: (PDF 180 kb)
Orchelimum concinnum Scudder 1862
Creators: name: Hollier, John
name: Heads, Sam W.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Tettigoniidae
Orchelimum
Orchelimum concinnum

description: concinnum Scudder, 1862: 452 [Orchelimum].
One ♂ and one ♀ paralectotype. The lectotype (designated by Rehn & Hebard, 1915: 60) is in the ANSP.
Orchelimum concinnum Scudder, 1862
description: Published as part of Hollier, John & Heads, Sam W., 2014, The type specimens of Orthoptera described by American entomologists in the collection of the Muséum d'histoire naturelle de Genève, pp. 63-76 in Revue suisse de Zoologie 121 (1) on page 72, DOI: 10.5281/zenodo.5822978
Additional file 1: of Current practice of antibiotic prophylaxis for surgical fixation of closed long bone fractures: a survey of 297 members of the Orthopaedic Trauma Association
Creators: name: Gans, Itai
name: Jain, Amit
name: Norachart Sirisreetreerux
name: Haut, Elliott
name: Hasenboehler, Erik
Publisher: name: Figshare
Year: 2017
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Science Policy
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Survey sent to Orthopaedic Trauma Association members to determine perioperative antibiotic use patterns for patients with closed long bone fractures, Septemberâ  December 2015. (DOCX 15Â kb)
MOESM8 of Whole-genome sequence-based genomic prediction in laying chickens with different genomic relationship matrices to account for genetic architecture
Creators: name: Guiyan Ni
name: Cavero, David
name: Fangmann, Anna
name: Erbe, Malena
name: Simianer, Henner
Publisher: name: Figshare
Year: 2017
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences

description: Additional file 8: Figure S5. Predictive ability in a full-sib family with 12 individuals for feed intake based on high-density (HD) array data (top) and whole-genome sequence (WGS) data (bottom) of one replicate. In each plot matrix, the diagonal shows the histograms of DRP and DGV obtained with various G matrices. The upper triangle shows the Spearmanâ  s rank correlation between DGV with different G matrices and DRP. The lower triangle shows the scatter plot of DGV with different G matrices and DRP.
Additional file 1: of Geographic variation in selected hospital procedures and services in the Israeli health care system
Creators: name: Mendlovic, Joseph
name: Ethel-Sherry Gordon
name: Ziona Haklai
name: Meron, Jill
name: Afek, Arnon
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Molecular Biology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Infectious Diseases
subject: FOS: Health sciences

description: (PDF 180 kb)
title: Persönlichkeitsentwicklung durch Kämpfen. Eine quantitative Fragebogenerhebung an Sportstudierenden
titleType: Other
Creators: name: Van der Zander, Julia
name: Karsch, Johannes
Publisher: name: Deutsche Sporthochschule Köln
Year: 2024

description: Ringen und Kämpfen ist nach wie vor trotz Verbindlichkeit ein im Vergleich wenig unterrichtetes Bewegungsfeld, das für Lehramt Sport Studierende größtenteils gänzlich neu ist. Zur Begründung für oder wider das Kämpfen im Sportunterricht werden seit Jahrzehnten immer wieder verschiedene Potenziale sowie Risiken diskutiert. Auf der einen Seite werden durch die körperliche Nähe, die gegenseitige Abhängigkeit sowie das partnerschaftliche Üben Zugewinne im Bereich Empathie, aber auch anderen Persönlichkeitsdimensionen postuliert, wohingehend andererseits begründet durch die kämpferische Interaktion auch Gefahren z.B. hinsichtlich steigender oder eskalierender Aggression vermutet werden.
Die vorliegende Studie möchte die Diskussion mit neuen Erkenntnissen bereichern und untersucht mit einem kontrollierten Prä-Post-Design die Empathie-, Selbstwert- und Aggressionsentwicklung von Sportstudierenden im Rahmen der Teilnahme an einem kampfbezogenen Sportpraxiskurs. Wenngleich sich hierbei keine verallgemeinerbaren Entwicklungen einstellten, zeigt die vorliegende Untersuchung eine Zunahme des Selbstwerts sowie eine geringfügige Abnahme der Aggression der Versuchsgruppe. Die Selbstwertentwicklung geht dabei interessanterweise in großem Maße auf die Teilnehmerinnen zurück. Im ersten Messzeitpunkt zeigt sich weiterhin, dass Proband:innen, die nach eigenen Angaben über eine nicht näher beschriebene Vorerfahrung verfügen, höhere Aggressionswerte haben, als Kommiliton:innen ohne jegliche Vorerfahrung. Diese Ergebnisse stehen einerseits teilweise im Einklang mit bisherigen Befunden, geben andererseits aber auch Anstoß für weitere Forschungsdesiderate und praktische Implikationen.
Conocephalus ictus
Creators: name: Hollier, John
name: Heads, Sam W.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Tettigoniidae
Conocephalus
Conocephalus ictus

description: ictum Scudder, 1875a: 461 [Xiphidium].
One ♂ syntype. There are at least two other syntypes in the ANSP.
Conocephalus ictus (Scudder, 1875).
description: Published as part of Hollier, John & Heads, Sam W., 2014, The type specimens of Orthoptera described by American entomologists in the collection of the Muséum d'histoire naturelle de Genève, pp. 63-76 in Revue suisse de Zoologie 121 (1) on page 72, DOI: 10.5281/zenodo.5822978
ROBOTOTEXNIKADA ARDUINO UNO QURILAMALARINING IMKONIAYATLARI VA QULAYLIKLARI
Creators: name: Qodirov, Farrux
name: Tolipova, Sabina
Publisher: name: Zenodo
Year: 2024

description: Bu maqola robot texnikani qanday ishlashi afzalliklari haqida qisqacha ma’lumot berilgan. Arduino uno qurilamalarining imkoniayatlari haqida ham afzalliklari va uning foydalari haqida tushinchalar bayon qilingan.
Ceraia similis Caudell 1906
Creators: name: Hollier, John
name: Heads, Sam W.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Tettigoniidae
Ceraia
Ceraia similis

description: paraguayensis Rehn, 1907: 385 [Turpilia].
One ♀ syntype. There are further syntypes in the ANSP.
A junior synonym of Ceraia similis Caudell, 1906
description: Published as part of Hollier, John & Heads, Sam W., 2014, The type specimens of Orthoptera described by American entomologists in the collection of the Muséum d'histoire naturelle de Genève, pp. 63-76 in Revue suisse de Zoologie 121 (1) on page 73, DOI: 10.5281/zenodo.5822978
Additional file: of Do childrenâ  s previous dental experience and fear affect their perceived oral health-related quality of life (OHRQoL)?
Creators: name: Merdad, Leena
name: Azza El-Housseiny
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Parent Questionnaire: was directed to the childrenâ  s parents and used to assess the different factors associated with OHRQoL. (PDF 121 kb)
LLMParser: An Exploratory Study on Using Large Language Models for Log Parsing
Creators: name: Ma, Zeyang
name: Chen, An Ran
name: Kim, Dong Jae
name: Chen, Tse-Hsun
name: Wang, Shaowei
Publisher: name: arXiv
Year: 2024
Subjects: subject: Software Engineering (cs.SE)
subject: Artificial Intelligence (cs.AI)
subject: FOS: Computer and information sciences

description: Logs are important in modern software development with runtime information. Log parsing is the first step in many log-based analyses, that involve extracting structured information from unstructured log data. Traditional log parsers face challenges in accurately parsing logs due to the diversity of log formats, which directly impacts the performance of downstream log-analysis tasks. In this paper, we explore the potential of using Large Language Models (LLMs) for log parsing and propose LLMParser, an LLM-based log parser based on generative LLMs and few-shot tuning. We leverage four LLMs, Flan-T5-small, Flan-T5-base, LLaMA-7B, and ChatGLM-6B in LLMParsers. Our evaluation of 16 open-source systems shows that LLMParser achieves statistically significantly higher parsing accuracy than state-of-the-art parsers (a 96% average parsing accuracy). We further conduct a comprehensive empirical analysis on the effect of training size, model size, and pre-training LLM on log parsing accuracy. We find that smaller LLMs may be more effective than more complex LLMs; for instance where Flan-T5-base achieves comparable results as LLaMA-7B with a shorter inference time. We also find that using LLMs pre-trained using logs from other systems does not always improve parsing accuracy. While using pre-trained Flan-T5-base shows an improvement in accuracy, pre-trained LLaMA results in a decrease (decrease by almost 55% in group accuracy). In short, our study provides empirical evidence for using LLMs for log parsing and highlights the limitations and future research direction of LLM-based log parsers.
Harnessing Data Visualization for Public Engagement a Case Study: Air Quality Stripes
Creators: name: Rigby, Richard
name: Illingworth, Malcolm
name: Pringle, Kirsty
name: McQuaid, Jim
Publisher: name: Zenodo
Year: 2024
Subjects: rse

description: Data visualisation can serve as a powerful conduit for communicating complex information to diverse audiences.  Research software engineers are often well placed to help researchers visualise complex datasets in a clear and impactful way.  Such visualisations not only enhance accessibility but also foster public engagement and awareness.
In this work we show an example of such a collaboration.  Inspired by the well known Climate Warming Stripes images which vividly show the global temperature change (https://www.reading.ac.uk/planet/climate-resources/climate-stripes) since 1850, we present the Air Quality Stripes, a series of visualisations which depict historical changes in air pollution concentrations from 1850-2021.  These illustrations, produced from publicly available data (UKESM1 CMIP6 ensemble dataset), clearly show the changing trends in air pollution in different cities.  Overall air pollution in Europe and North America was worst in the 1940-1960s but has responded to increased legislation.  Unfortunately air pollution concentrations in many parts of Africa and Asia are rising at a concerning level. These images are being used to stimulate discussions around air quality and inequality around the globe.  Images were produced using Jupyter notebooks on the JASMIN data service.  Input from an experienced RSE was core to the data manipulation, processing and visualisation required to realise this idea. 
These visualizations serve as catalysts for discussions surrounding air quality and societal inequalities worldwide. This presentation underscores the immense potential for RSEs to actively contribute to translating research into engaging and accessible material, thereby fostering broader awareness and understanding of critical global issues.

A recording of this session is available on YouTube: https://youtu.be/MjhhCI0GOU8