cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 3 of An open protocol for modeling T Cell Clonotype repertoires using TCRβ CDR3 sequences
Creators: name: Gurun, Burcu
name: Horton, Wesley
name: Murugan, Dhaarini
name: Zhu, Biqing
name: Leyshock, Patrick
name: Kumar, Sushil
name: Byrne, Katelyn T.
name: Vonderheide, Robert H.
name: Margolin, Adam A.
name: Mori, Motomi
name: Spellman, Paul T.
name: Coussens, Lisa M.
name: Speed, Terence P.
Publisher: name: figshare
Year: 2023
Subjects: subject: Biophysics
subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
classificationCode: 39999
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
classificationCode: 69999
subject: Biological Sciences not elsewhere classified

description: Additional file 3.
A Metal-Strong and Dust-Rich Damped \lya Absorption System toward the Quasar SDSS J115705.52+615521.7
Creators: name: Wang, Jian-Guo
name: Zhou, Hong-Yan
name: Ge, Jian
name: Jiang, Peng
name: Lu, Hong-Lin
name: Prochaska, Jason Xavier
name: Hamann, Fred
name: Wang, Hui-Yuan
name: Wang, Ting-Gui
name: Yuan, WeiMin
Publisher: name: arXiv
Year: 2012
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: (Abridged for arXiv) We report the discovery of an unusual, extremely dust-rich and metal-strong damped \lya absorption system (DLA) at a redshift $z_{a}=2.4596$ toward the quasar SDSS J115705.52+615521.7 (hereafter J1157+6155) with an emission-line redshift $z_{e}=2.5125$. Its neutral hydrogen column density $N_{\hi} = 10^{21.8\pm0.2}$ cm$^{-2}$ is among the highest values measured in quasar DLAs. The measured metal column density is $N_{ZnII}\approx 10^{13.8}$ cm$^{-2}$, which is about 1.5 times larger than the largest value in any previously observed quasar DLAs. The best-fit curve is a MW-like law with a significant broad feature centered around 2175 Å in the rest frame of the absorber. The measured extinction $A_V \approx 0.92$ mag is unprecedentedly high in quasar DLAs. After applying an extinction correction, the $i$ band absolute magnitude of the quasar is as high as $M_{i} \approx -29.4$ mag, placing it one of the most luminous quasars ever known. This discovery is suggestive of the existence of a rare yet important population of dust-rich DLAs with both high metallicities and high column densities, which may have significant impact on the measurement of the cosmic evolution of neutral gas mass density and metallicity.
description: 15 pages, 10 figures, 1 table
Additional file 1 of Endoscopic treatment (endoscopic balloon dilation/self-expandable metal stent) vs surgical resection for the treatment of de novo stenosis in Crohn’s disease (ENDOCIR study): an open-label, multicentre, randomized trial
Creators: name: Loras, Carme
name: Ruiz-Ramirez, Pablo
name: Romero, Juan
name: Andújar, Xavier
name: Bargallo, Josep
name: Bernardos, Esther
name: Boscá-Watts, Marta Maia
name: Brugiotti, Carlo
name: Brunet, Eduard
name: Busquets, David
name: Cerrillo, Elena
name: Cortina, Francisco Javier
name: Díaz-Milanés, Juan Antonio
name: Dueñas, Carmen
name: Farrés, Ramón
name: Golda, Thomas
name: González-Huix, Ferran
name: Gornals, Joan B.
name: Guardiola, Jordi
name: Julià, David
name: Lira, Alba
name: Llaó, Jordina
name: Mañosa, Miriam
name: Marin, Ingrid
name: Millán, Mónica
name: Monfort, David
name: Moro, David
name: Mullerat, Josep
name: Navarro, Mercè
name: Pérez Roldán, Francisco
name: Pijoan, Eva
name: Pons, Vicente
name: Reyes, José
name: Rufas, María
name: Sainz, Empar
name: Sanchiz, Vicente
name: Serracant, Anna
name: Sese, Eva
name: Soto, Cristina
name: Troya, Jose
name: Zaragoza, Natividad
name: Tebé, Cristian
name: Paraira, Marta
name: Sudrià-Lopez, Emma
name: Mayor, Vicenç
name: Fernández-Bañares, Fernando
name: Esteve, Maria
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
classificationCode: 39999
subject: Chemical Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer

description: Additional file 1. SPIRITpirit checklist.
Measurement of CNGS muon neutrino speed with Borexino
Creators: name: Borexino Collaboration
Publisher: name: arXiv
Year: 2012
Subjects: subject: High Energy Physics - Experiment (hep-ex)
subject: Instrumentation and Detectors (physics.ins-det)
subject: FOS: Physical sciences

description: We have measured the speed of muon neutrinos with the Borexino detector using short-bunch CNGS beams. The final result for the difference in time-of-flight between a =17 GeV muon neutrino and a particle moving at the speed of light in vacuum is δt = 0.8 \pm 0.7stat \pm 2.9sys ns, well consistent with zero.
description: 6 pages, 5 figures
Balaena mysticetus Linnaeus 1758
Creators: name: Honacki, James H.
name: Kinman, Kenneth E.
name: Koeppl, James W.
Publisher: name: Zenodo
Year: 1982
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Cetacea
Balaenidae
Balaena
Balaena mysticetus

description: Balaena mysticetus Linnaeus, 1758. Syst. Nat., 10th ed., 1:75. TYPE LOCALITY: Greenland Sea. DISTRIBUTION: Northern Hemisphere, arctic seas. PROTECTED STATUS: CITES - Appendix I as B. mysticetus and U.S. ESA - Endangered as B. mysticetus. ISIS NUMBER: 5301411008001002001.
description: Published as part of James H. Honacki, Kenneth E. Kinman & James W. Koeppl, 1982, Order Cetacea, pp. 290-304 in Mammal Species of the World (1 st Edition), Lawrence, Kansas, USA :Alien Press, Inc. & The Association of Systematics Collections on page 303, DOI: 10.5281/zenodo.7352983
Multi-scale discrete approximations of Fourier integral operators associated with canonical transformations and caustics
Creators: name: de Hoop, Maarten V.
name: Uhlmann, Gunther
name: Vasy, Andras
name: Wendt, Herwig
Publisher: name: arXiv
Year: 2012
Subjects: subject: Numerical Analysis (math.NA)
subject: FOS: Mathematics

description: We develop an algorithm for the computation of general Fourier integral operators associated with canonical graphs. The algorithm is based on dyadic parabolic decomposition using wave packets and enables the discrete approximate evaluation of the action of such operators on data in the presence of caustics. The procedure consists in the construction of a universal operator representation through the introduction of locally singularity-resolving diffeomorphisms, enabling the application of wave packet driven computation, and in the construction of the associated pseudo-differential joint-partition of unity on the canonical graphs. We apply the method to a parametrix of the wave equation in the vicinity of a cusp singularity.
description: 18 pages, 9 figures, to appear in SIAM MMS
Bundles of rank 3 on curves of Clifford index 3
Creators: name: Lange, H.
name: Newstead, P. E.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Algebraic Geometry (math.AG)
subject: FOS: Mathematics
subject: 14H60

description: Two definitions of the Clifford index for vector bundles on a smooth projective curve $C$ of genus $g\ge4$ were introduced in a previous paper by the authors. In another paper the authors obtained results on one of these indices for bundles of rank 3. In this paper we extend these results in the case where $C$ has classical Clifford index 3. In particular we prove Mercat's conjecture for bundles of rank 3 for $g \leq 8$ and $g \geq 13$ when $C$ has classical Clifford index 3. We obtain complete results in the case of genus 7.
description: Final version. Typos corrected and minor style changes
Distance and reddening of the Local Group dwarf irregular galaxy NGC 6822
Creators: name: Fusco, F.
name: Buonanno, R.
name: Bono, G.
name: Cassisi, S.
name: Monelli, M.
name: Pietrinferni, A.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: On the basis of a new photometric analysis of the Local Group dwarf irregular galaxy NCG 6822 based on observations obtained with the Advanced Camera for Surveys onboard the Hubble Space Telescope, we have obtained a new estimate of the extinction of two fields located in the southeast region of the galaxy. Because of significant differences in the distance estimates to NGC 6822 available in literature, we decided to provide an independent determination of the distance to this galaxy based on an updated and self-consistent theoretical calibration of the tip of the red giant branch brightness. As a result we newly determined the distance to NGC 6822 to be equal to ${\rm(m-M)}_0=23.54\pm 0.05$, and compared our measurement with the most recent determinations of this distance.
description: 5 pages, 5 figures, Astronomy & Astrophysics (Research Note), in press (proof correction included)
Additional file 2 of Endoscopic treatment (endoscopic balloon dilation/self-expandable metal stent) vs surgical resection for the treatment of de novo stenosis in Crohn’s disease (ENDOCIR study): an open-label, multicentre, randomized trial
Creators: name: Loras, Carme
name: Ruiz-Ramirez, Pablo
name: Romero, Juan
name: Andújar, Xavier
name: Bargallo, Josep
name: Bernardos, Esther
name: Boscá-Watts, Marta Maia
name: Brugiotti, Carlo
name: Brunet, Eduard
name: Busquets, David
name: Cerrillo, Elena
name: Cortina, Francisco Javier
name: Díaz-Milanés, Juan Antonio
name: Dueñas, Carmen
name: Farrés, Ramón
name: Golda, Thomas
name: González-Huix, Ferran
name: Gornals, Joan B.
name: Guardiola, Jordi
name: Julià, David
name: Lira, Alba
name: Llaó, Jordina
name: Mañosa, Miriam
name: Marin, Ingrid
name: Millán, Mónica
name: Monfort, David
name: Moro, David
name: Mullerat, Josep
name: Navarro, Mercè
name: Pérez Roldán, Francisco
name: Pijoan, Eva
name: Pons, Vicente
name: Reyes, José
name: Rufas, María
name: Sainz, Empar
name: Sanchiz, Vicente
name: Serracant, Anna
name: Sese, Eva
name: Soto, Cristina
name: Troya, Jose
name: Zaragoza, Natividad
name: Tebé, Cristian
name: Paraira, Marta
name: Sudrià-Lopez, Emma
name: Mayor, Vicenç
name: Fernández-Bañares, Fernando
name: Esteve, Maria
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
classificationCode: 39999
subject: Chemical Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer

description: Additional file 2. IBDQ-32, EQ-5D-5L questionnaires and IBD-Control (in Spanish).
Pair excitations and the mean field approximation of interacting Bosons, I
Creators: name: Grillakis, M.
name: Machedon, M.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Mathematical Physics (math-ph)
subject: Analysis of PDEs (math.AP)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: In our previous work \cite{GMM1},\cite{GMM2} we introduced a correction to the mean field approximation of interacting Bosons. This correction describes the evolution of pairs of particles that leave the condensate and subsequently evolve on a background formed by the condensate. In \cite{GMM2} we carried out the analysis assuming that the interactions are independent of the number of particles $N$. Here we consider the case of stronger interactions. We offer a new transparent derivation for the evolution of pair excitations. Indeed, we obtain a pair of linear equations describing their evolution. Furthermore, we obtain apriory estimates independent of the number of particles and use these to compare the exact with the approximate dynamics.
Spatiotemporal change analysis of environmental quality in rare earth mining areas based on long-term Landsat images
Creators: name: Pan, Jiao
name: Li, Hengkai
name: Li, Yingshuang
Publisher: name: figshare
Year: 2021
Subjects: subject: Ecology
subject: FOS: Biological sciences
subject: 50205 Environmental Management
subject: FOS: Earth and related environmental sciences
subject: 50206 Environmental Monitoring
subject: Environmental Science

description: 基于遥感的生态指数（RSEI）模型用于评估稀土矿区环境质量的变化。1986 年至 2019 年的 30 幅 Landsat 图像用于中国定南县灵北矿区的案例研究。
PERCEPTIONS OF ARTIFICIAL INTELLIGENCE IN MENU DEVELOPMENT AND PROFITABILITY IN CULINARY ARTS
Creators: name: HAZIM RYAD MOMANI
name: SAAHERAH BASIL ALKILANY
name: MUTHANA MOHAMMED AMOUSH
name: AMMAR MOHAMMAD AL-RAMADAN
name: Dr. AMER HANI AL-QASSEM
Publisher: name: Zenodo
Year: 2025
Subjects: Artificial Intelligence, Restaurants, Menu Optimization, Profitability, Guest Satisfaction.

description: Abstract

Artificial intelligence (AI) is progressively reshaping the culinary sector by boosting profits and improving menu layouts. This study investigates how AI affects menu management, financial development, and customer contentment. The study collected perspectives from restaurant managers, professional chefs, and AI experts through a qualitative interview-based method. The study examines the perceptions of AI technologies on menu enhancement and operational effectiveness. The results indicate that AI is essential for enhancing menu personalization, maximizing ingredient efficiency, minimizing food waste, and boosting customer satisfaction via tailored dining experiences. AI-powered tools enhance demand prediction, accurate inventory control, and customized menu recommendations, improving profitability and operational effectiveness. The interviews also show that AI promotes customer loyalty by providing tailored experiences and improving the dining experience. The study concludes that AI has demonstrated its effectiveness as a significant asset in the food sector, enhancing efficiency and increasing customer interaction. This study emphasizes incorporating AI into menu management systems for sustainable development. The study recommends that future research examine the cultural differences and impactful views surrounding the application of AI in the food service sector.
Caperea Gray 1864
Creators: name: Honacki, James H.
name: Kinman, Kenneth E.
name: Koeppl, James W.
Publisher: name: Zenodo
Year: 1982
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Cetacea
Balaenidae
Caperea

description: Caperea Gray, 1864. Proc. Zool. Soc. Lond., 1864:202. COMMENT: Neobalaena Gray, 1870, is a junior synonym; see Van Beneden, 1874, Bull. R. Acad. Belg., ser. 2, 37:832. PROTECTED STATUS: CITES - Appendix II as Order Cetacea. ISIS NUMBER: 5301411008002000000.
description: Published as part of James H. Honacki, Kenneth E. Kinman & James W. Koeppl, 1982, Order Cetacea, pp. 290-304 in Mammal Species of the World (1 st Edition), Lawrence, Kansas, USA :Alien Press, Inc. & The Association of Systematics Collections on page 304, DOI: 10.5281/zenodo.7352983
description: {"references": ["Gray, J. E. 1870. Catalogue of monkeys, lemurs and fruit eating bats in the collections of the British Museum. British Museum, London, 137 pp."]}
Children’s and Parents’ Worries About Online Schooling Associated With Children’s Anxiety During Lockdown in Ireland
Creators: name: A. Laffan, Derek
name: Kuldas, Seffetullah
name: Sciacca, Beatrice
name: Norman, James O'Higgins
name: Milosevic, Tijana
Publisher: name: figshare
Year: 2023
Subjects: classificationCode: 520105
subject: Psychological methodology, design and analysis
classificationCode: 520101
subject: Child and adolescent development
classificationCode: 470101
subject: Communication studies
classificationCode: 400902
subject: Digital electronic devices
classificationCode: 520505
subject: Social psychology
classificationCode: 520102
subject: Educational psychology

description: The COVID-19 pandemic has persisted as a worrying time for children who have been using technology for online schooling during lockdown and their parents. This study investigates the extent of children’s and parents’ self-reported worries associated with children’s anxiety during lockdown in Ireland. Data for 461 children and 461 parents were analyzed from the Ireland dataset obtained as part of the Kids’ Digital Lives in COVID-19 Times (KiDiCoTi) international survey. Children reported worries about keeping up with school activities online, getting poor grades, and completing their schoolwork online. Parents reported worries about COVID-19 having a negative influence on their children’s education and their children being exposed to more online risks. Children’s worries about school explained much of the variance of their anxiety to a significant degree, whereas parents’ worries explained that variance to a lesser extent. Implications of these results are discussed in the article.
Nottingham Lie algebras with diamonds of finite and infinite type
Creators: name: Avitabile, Marina
name: Mattarei, Sandro
Publisher: name: arXiv
Year: 2012
Subjects: subject: Rings and Algebras (math.RA)
subject: FOS: Mathematics
subject: 17B50 (Primary) 17B70, 17B65, 17B56 (Secondary)

description: We consider a class of infinite-dimensional, modular, graded Lie algebras, which includes the graded Lie algebra associated to the Nottingham group with respect to its lower central series. We identify two subclasses of Nottingham Lie algebras as loop algebras of finite-dimensional simple Lie algebras of Hamiltonian Cartan type. A property of Laguerre polynomials of derivations, which is related to toral switching, plays a crucial role in our constructions.
description: 17 pages; minor changes from the previous version
Developing equitable OA for books: Building open infrastructure
Creators: name: Barnes, Lucy
Publisher: name: Zenodo
Year: 2023

description: Slides for a presentation given online at '"My heart is an open book": Open Access for longform research' organised by the University of Sussex. The presentation explored Copim's work in building open, community-owned infrastructure for open access books, and how that would be developed as part of Open Book Futures.
Remarks on Hall algebras of triangulated categories
Creators: name: Xiao, Jie
name: Xu, Fan
Publisher: name: arXiv
Year: 2012
Subjects: subject: Quantum Algebra (math.QA)
subject: Category Theory (math.CT)
subject: FOS: Mathematics

description: We introduce the notion of the Drinfeld dual of an algebra and show that Hall algebras defined by Kontsevich-Soibelman in \cite{KS} are the Drinfeld duals of derived Hall algebras defined in \cite{Toen2005} and \cite{XX2006}. Moreover, we construct the motivic analogue of a derived Hall algebra and prove that it is isomorphic to the motivic Hall algebra constructed in \cite{KS}.
description: 19 pages
Laguerre polynomials of derivations
Creators: name: Avitabile, Marina
name: Mattarei, Sandro
Publisher: name: arXiv
Year: 2012
Subjects: subject: Rings and Algebras (math.RA)
subject: FOS: Mathematics
subject: 17A36 (Primary) 33C52, 17B50, 17B65 (Secondary)

description: We introduce a 'grading switching' for arbitrary nonassociative algebras of prime characteristic p, aimed at producing a new grading of an algebra from a given one. We take inspiration from a fundamental tool in the classification theory of modular Lie algebras known as 'toral switching', which relies on a delicate adaptation of the exponential of a derivation. Our grading switching is achieved by evaluating certain generalized Laguerre polynomials of degree p-1, which play the role of generalized exponentials, on a derivation of the algebra. A crucial part of our argument is establishing a congruence for them which is an appropriate analogue of the functional equation exp(x)*exp(y)=exp(x+y) for the classical exponential. Besides having a wider scope, our treatment provides a more transparent explanation of some aspects of the original toral switching, which can be recovered as a special case.
description: 15 pages; minor changes from the previous version
title: Identification of gene markers for in vitro toxicity control testing of pertussis vaccines
Creators: name: Moncassin, Noela
Publisher: name: University of Glasgow
Year: 2005
Subjects: subject: Pharmaceutical sciences, genetics, toxicology.

description: Whole-cell (WCV) and acellular (ACV) pertussis vaccines play an essential role in immunization programs for the prevention of the disease pertussis (whooping cough). Pertussis toxin (PT), one of the Bordetella pertussis toxins, is a major component in both WCV and ACV. The histamine sensitisation test (HIST) is a toxicity test, in mice, used to assure the absence of significant residual PT activity in pertussis vaccines. HIST is a lethal test and large variations in test performance have been observed. The objective of this project was to investigate the gene expression of selected cell lines treated with PT and detoxified pertussis toxin (dPT) using microarray technology and, from the expression profiles obtained, to identify gene markers of the toxicological effects of PT which may form the base to develop an in vitro assay as an alternative to HIST. Two cell types were investigated: human umbilical vein endothelial cells (HUVEC) and bronchial epithelial cells (NL20). Based on morphological and cytotoxicity studies, the cells were treated with PT and dPT at a concentration of 2.5 mug/ml for 6h. The gene expression profiles obtained lead to the speculation that PT could play an important role in the induction of the cell-mediated immunity (up-regulation of: galectin 3, small inducible cytokine subfamily 20, Thy-1 cell surface antigen and CD63 genes) and that PT could also have an important role in the induction of vascular permeability (up-regulation of: platelet-derived growth factor, vascular endothelial growth factor c) and that the effect may take place at the brain level (up- regulation of: glial fibrillary acidic protein, chlorine channel 3, cholinergic receptor). RT PCR study needs further investigation, nevertheless, the ICAM 1 gene (specifically up regulated by PT + TNF-alpha treatment) may serve as a gene marker of PT toxicity. ln addition, data from a cell migration study with endothelial cells suggested that PT could be involved in angiogenesis. The phenotypic and genomic data presented in this study suggest that, in order to develop a replacement for the in vivo HIST control test, an in vitro permeability assay with monolayer endothelial cells may be worth investigating.
Open Source Software and OSPOs: The Connection between Open Science and Sustainable Development Goals (SDGs)
Creators: name: Sayeed, Choudhury
Publisher: name: Zenodo
Year: 2023

description: Sayeed Choudhury presented "Open Source Software and OSPOs: The Connection between Open Science and Sustainable Development Goals (SDGs)" during the 2023 Annual Forum for Open Research in Abu Dhabi, UAE.
Colossal non-saturating linear magnetoresistance in two-dimensional electron systems at a GaAs/AlGaAs heterointerface
Creators: name: Aamir, M. A.
name: Goswami, Srijit
name: Baenninger, Matthias
name: Tripathi, Vikram
name: Pepper, Michael
name: Farrer, Ian
name: Ritchie, David A.
name: Ghosh, Arindam
Publisher: name: arXiv
Year: 2012
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Engineering devices with a large electrical response to magnetic field is of fundamental importance for a range of applications such as magnetic field sensing and magnetic read-heads. We show that a colossal non-saturating linear magnetoresistance (NLMR) arises in two-dimensional electron systems hosted in a GaAs/AlGaAs heterostructure in the strongly insulating regime. When operated at high source-drain bias, the magnetoresistance of our devices increases almost linearly with magnetic field reaching nearly 10,000% at 8 Tesla, thus surpassing many known non-magnetic materials that exhibit giant NLMR. The temperature dependence and mobility analysis indicate that the NLMR has a purely classical origin, driven by nanoscale inhomogeneities. A large NLMR combined with small device dimensions makes these systems a new and attractive candidate for on-chip magnetic field sensing.
description: Main text contains 5 pages, 4 figures; supplementary information is included
Bosonic Fractionalisation Transitions
Creators: name: Adam, Alexander
name: Crampton, Benedict
name: Sonner, Julian
name: Withers, Benjamin
Publisher: name: arXiv
Year: 2012
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: At finite density, charge in holographic systems can be sourced either by explicit matter sources in the bulk or by bulk horizons. In this paper we find bosonic solutions of both types, breaking a global U(1) symmetry in the former case and leaving it unbroken in the latter. Using a minimal bottom-up model we exhibit phase transitions between the two cases, under the influence of a relevant operator in the dual field theory. We also embed solutions and transitions of this type in M-theory, where, holding the theory at constant chemical potential, the cohesive phase is connected to a neutral phase of Schrödinger type via a z=2 QCP.
description: references added. minor changes. version published in JHEP
Using Application Programming Interfaces to automate NO2 Data Collection of the Ukraine Region Using Data From NASA Satellites
Creators: name: Nayak, Priya
name: Anusha
name: Chaowei
Publisher: name: Journal of Student-Scientists' Research
Year: 2022

description: With a rapidly changing environment, tracking long-term changes is vital to understanding the world around us. Creating visualizations is one of the most effective ways to see the changes to the environment, which can be done by acquiring large sets of data. The focus of the research is on nitrogen dioxide(NO2) density in the Ukraine region. This particular region is a hotspot for special research as factors such as war can contribute to a very rapid change in the density of NO2 above the area. The negative impacts of high NO2 density, such as global warming and health issues, make tracking the density all the more important. In the current research, collecting the large amounts of data needed to create the visualizations can be a lengthy and tedious process, with daily data collection requiring multiple steps. The aim is to automate this process, and Application Programming Interfaces(API) are one of the best solutions. APIs can be used to download the data from NASA servers in one simple step. Using APIs, code written in Python is run, simplifying the task of the user to just changing the date range for the data needed to be collected. The use of APIs in data collection simplifies a task that originally took hours, into a task that can be completed in under 5 minutes.
description: Journal of Student-Scientists' Research, Vol. 4 (2022)
Additional file 1 of High mobility group box 1 and a network of other biomolecules influence fatigue in patients with Crohn’s disease
Creators: name: Kvivik, Ingeborg
name: Grimstad, Tore
name: Bårdsen, Kjetil
name: Jonsson, Grete
name: Kvaløy, Jan Terje
name: Omdal, Roald
Publisher: name: figshare
Year: 2023
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 1: Table S1. Full multivariable regression models with fVAS, FSS, and SF-36vs scores respectively as dependent variables.
Kashimpur Central Jail -2
Creators: name: Rahman, Anisur
Publisher: name: figshare
Year: 2023
Subjects: Gender studies not elsewhere classified
Studies of men and masculinities
Gender relations

description: The text discusses the prison system in Bangladesh, specifically the Bangladesh Jail Department. It explains that there is no difference between "prison" and "jail" in Bangladesh and that the prison administration is operated by a combination of laws and rules. The text also describes the history of the prison system in Bangladesh and its current structure, including the number of central and district jails. The author then discusses their own perceptions of prisons before learning about the Bangladesh system, including beliefs about torture, food, and work opportunities for prisoners. They express surprise at the existence of modern technology and digital machines, arrangements for meals, and opportunities for education and treatment. They also describe positive aspects of the prison environment, such as clean surroundings, gardens, and recreational areas. However, the author also acknowledges limitations of the prison system in Bangladesh, including overcrowding, poor hygiene and sanitation, reports of torture, limited access to the library, poor education and medical systems, and a lack of management for psychiatrics. The text also suggests that corruption is a problem in the prison system.
Demonstrating a Driven Reset Protocol of a Superconducting Qubit
Creators: name: Geerlings, K.
name: Leghtas, Z.
name: Pop, I. M.
name: Shankar, S.
name: Frunzio, L.
name: Schoelkopf, R. J.
name: Mirrahimi, M.
name: Devoret, M. H.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Qubit reset is crucial at the start of and during quantum information algorithms. We present the experimental demonstration of a practical method to force qubits into their ground state, based on driving certain qubit and cavity transitions. Our protocol, called the double drive reset of population is tested on a superconducting transmon qubit in a three-dimensional cavity. Using a new method for measuring population, we show that we can prepare the ground state with a fidelity of at least 99.5 % in less than 3 microseconds; faster times and higher fidelity are predicted upon parameter optimization.
description: 5 pages, 4 figures
Brief review on semileptonic B decays
Creators: name: Ricciardi, Giulia
Publisher: name: arXiv
Year: 2012
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We concisely review semileptonic B decays, focussing on recent progress on both theoretical and experimental sides.
description: 18 pages, 2 figures; version to be published in Mod. Phys. Lett. A
A supersymmetric multicritical point in a model of lattice fermions
Creators: name: Bauer, Bela
name: Huijse, Liza
name: Berg, Erez
name: Troyer, Matthias
name: Schoutens, Kareljan
Publisher: name: arXiv
Year: 2012
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We study a model of spinless fermions with infinite nearest-neighbor repulsion on the square ladder which has microscopic supersymmetry. It has been conjectured that in the continuum the model is described by the superconformal minimal model with central charge c=3/2. Thus far it has not been possible to confirm this conjecture due to strong finite-size corrections in numerical data. We trace the origin of these corrections to the presence of unusual marginal operators that break Lorentz invariance, but preserve part of the supersymmetry. By relying mostly on entanglement entropy calculations with the density-matrix renormalization group, we are able to reduce finite-size effects significantly. This allows us to unambiguously determine the continuum theory of the model. We also study perturbations of the model and establish that the supersymmetric model is a multicritical point. Our work underlines the power of entanglement entropy as a probe of the phases of quantum many-body systems.
description: 16 pages, 8 figures
Multiple dark matter scenarios from ubiquitous stringy throats
Creators: name: Chialva, Diego
name: Dev, P. S. Bhupal
name: Mazumdar, Anupam
Publisher: name: arXiv
Year: 2012
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We discuss the possibility of having multiple Kaluza-Klein (KK) dark matter candidates which arise naturally in generic Type-IIB string theory compactification scenarios. These dark matter candidates reside in various throats of the Calabi-Yau manifold. In principle, they can come with varied range of masses in four-dimensions depending upon the hierarchical warping of the throats. We show that consistency with cosmological bounds and four-dimensional effective theory description imposes strong constraints on the parameter space and the geometry of the throats. With a rather model-independent approach, we find that the mass scales allowed for the KK dark matter particles in various throats can vary between 0.1 eV and 10 TeV, depending upon the throat geometry. Thus, there could be simultaneously more than one kind of cold (and possibly warm and hot) dark matter components residing in the Universe. This multiple dark matter scenario could weaken the bound on a conventional supersymmetric dark matter candidate and could also account for extra relativistic degrees of freedom in our Universe.
description: 11 pages plus bibliography, added references, version published by Physical Review D
A UV complete model of Large N Thermal QCD
Creators: name: Chen, Fang
name: Chen, Long
name: Dasgupta, Keshav
name: Mia, Mohammed
name: Trottier, Olivier
Publisher: name: arXiv
Year: 2012
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Many recent works on large N holographic QCD in the planar limit have not considered UV completions, restricting exclusively towards analyzing the IR physics. Due to this, the UV problems like Landau poles and divergences of Wilson loops including instabilities at high temperatures have not been addressed. In some of our recent papers, we have discussed a possible UV completion, which is conformal in the UV and confining in the far IR, that avoids the Landau poles and the Wilson loop divergences. In this paper we give a field theory realization of this including the complete RG flow. We extend our UV complete model to study scenarios both above and below the deconfinement temperature and argue how phase transition in our model should be understood. Interestingly, because of the UV completion, subtle issues like instability due to negative specific heat do not appear. We also briefly elucidate the advantages that our model may have over other models studying large N thermal QCD.
description: LaTex, 8 pages, 3 figures, PRD format; v2: Typos corrected, references and a footnote added
Additional file 2 of High mobility group box 1 and a network of other biomolecules influence fatigue in patients with Crohn’s disease
Creators: name: Kvivik, Ingeborg
name: Grimstad, Tore
name: Bårdsen, Kjetil
name: Jonsson, Grete
name: Kvaløy, Jan Terje
name: Omdal, Roald
Publisher: name: figshare
Year: 2023
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 2: Table S2. Amount of variation explained by each component in an unsupervised principal component analysis of 52 patients with Crohn’s disease.
Correlation Testing in Nuclear Density Functional Theory
Creators: name: Bertolli, M. G.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: Correlation testing provides a quick method of discriminating amongst potential terms to include in a nuclear mass formula or functional and is a necessary tool for further nuclear mass models; however a firm mathematical foundation of the method has not been previously set forth. Here, the necessary justification for correlation testing is developed and more detail of the motivation behind its use is give. Examples are provided to clarify the method analytically and for computational benchmarking. We provide a quantitative demonstration of the method's performance and short-comings, highlighting also potential issues a user may encounter. In concluding we suggest some possible future developments to improve the limitations of the method.
description: Accepted to EPJ-A
Comparative Articular Cartilage Thickness Measures using High-Frequency Ultrasound versus Histology
Creators: name: Subramanyam, Sanjana
name: Charan, Akshay
name: , Caroline
Publisher: name: Journal of Student-Scientists' Research
Year: 2022

description: Osteoarthritis (OA) is the most common form of arthritis, affecting millions worldwide. Although research into treatments is continuously developed, scientists have not been able to find a way to reverse bone alterations due to this condition. Previous studies have shown that an initiating event in OA may involve remodeling of the tidemark, the cartilage-bone interface. Knowledge of factors that induce tidemark remodeling could help further design treatments to slow disease progression. The purpose of this study was to validate the use of Scanning Acoustic Microscopy (SAM) of mature bovine articular cartilage-bone explants to image the tidemark. Bovine explants were SAM scanned by high-frequency ultrasound (HFUS) before and after 1 week of in vitro culture, and cartilage thickness was measured using MATLAB (n=8). Imaged explants were frozen unfixed in OCT (optimal cutting temperature), cryosectioned in tissue arrays and submitted to enzyme staining for diaphorase, alkaline phosphatase, and chemical staining with hematoxylin and von-Kossa before and after DMMB to visualize the cartilage and tidemark. Enzyme staining showed that chondrocyte viability was preserved in the calcified cartilage layer during the 1 week culture period, with variable alkaline phosphatase staining in the cartilage deep zone and calcified cartilage layer. Quantitative histomorphometry using ImageJ (N=8) showed an average cartilage thickness of 1.02 mm (alkaline phosphatase), 1.07 mm (diaphorase) and 1.04 mm (von Kossa). HFUS measures of cartilage thickness were within 110 µm of histomorphometry thickness measures for 7 out of 8 explants before and after 1 week of in vitro culture. This study highlights the potential for HFUS to detect remodeling of the tidemark and calcified cartilage layer in a bovine explant tissue culture model.
description: Journal of Student-Scientists' Research, Vol. 4 (2022)
ПОПЫТКА ДОСТИЖЕНИЯ НОВОГО БАЛАНСА СИЛ В БЛИЖНЕВОСТОЧНОМ РЕГИОНЕ. РЕГИОНАЛЬНАЯ ПОЛИТИКА ПЯТОГО ПРАВИТЕЛЬСТВА НЕТАНЬЯХУ
Creators: name: КАРАСОВА Т.А.
Publisher: name: Свободная мысль
Year: 2021
Subjects: ИЗРАИЛЬ
ОБЪЕДИНЕННЫЕ АРАБСКИЕ ЭМИРАТЫ
БАХРЕЙН
"АВРААМИЧЕСКИЕ СОГЛАШЕНИЯ"
ТРАМП
ПАЛЕСТИНЦЫ

description: После долгого политического кризиса в Израиле в начале 2020 г. было сформировано правительство «национального единства». Премьер Б. Нетаньяху в качестве первого шага объявил план аннексии - односторонние действия, поддержанные администрацией Трампа, по распространению израильского суверенитета на территории Иорданской долины и блок поселений на оккупированном Западном берегу. В августе 2020 г. в Вашингтоне в присутствии Трампа состоялось подписание соглашений о нормализации и установлении дипломатических отношений между Израилем, ОАЭ и Бахрейном, что положило конец долгому периоду табу арабской дипломатии на отношения с Израилем. Ради подписания новых договоров, известных как «Авраамические соглашения», Нетаньяху согласился отложить план аннексии
Caperea marginata
Creators: name: Honacki, James H.
name: Kinman, Kenneth E.
name: Koeppl, James W.
Publisher: name: Zenodo
Year: 1982
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Cetacea
Balaenidae
Caperea
Caperea marginata

description: Caperea marginata (Gray, 1846). Zool. Voy. H.M.S. "Erebus" and "Terror," 1:48. TYPE LOCALITY: Australia, Western Australia. DISTRIBUTION: Southern Hemisphere, temperate waters. PROTECTED STATUS: CITES - Appendix II as Order Cetacea. ISIS NUMBER: 5301411008002001001.
description: Published as part of James H. Honacki, Kenneth E. Kinman & James W. Koeppl, 1982, Order Cetacea, pp. 290-304 in Mammal Species of the World (1 st Edition), Lawrence, Kansas, USA :Alien Press, Inc. & The Association of Systematics Collections on page 304, DOI: 10.5281/zenodo.7352983
Holographic thermalization with radial flow
Creators: name: van der Schee, Wilke
Publisher: name: arXiv
Year: 2012
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: Recently, a lot of effort has been put into describing the thermalization of the quark-gluon plasma using the gauge/gravity duality. In this context we here present a full numerical solution of the early far-from-equilibrium formation of the plasma, which is expanding radially in the transverse plane and is boost invariant along the collision axis. This can model the early stage of a head-on relativistic heavy ion collision. The resulting momentum distribution quickly reaches local equilibrium, after which they can be evolved using ordinary hydrodynamics. We comment on general implications for these hydrodynamic simulations, both for central and non-central collisions, and including fluctuations in the initial state.
description: 4 pages, 6 figures, comparison with a paper by Pratt and Vredevoogd added in version 2
Additional file 3 of High mobility group box 1 and a network of other biomolecules influence fatigue in patients with Crohn’s disease
Creators: name: Kvivik, Ingeborg
name: Grimstad, Tore
name: Bårdsen, Kjetil
name: Jonsson, Grete
name: Kvaløy, Jan Terje
name: Omdal, Roald
Publisher: name: figshare
Year: 2023
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 3: Table S3. Association (coordinates) and contribution of all variables to the first and second component in the unsupervised principal component analysis of 52 patients with Crohn’s disease.
Energy from the gauge invariant observables
Creators: name: Baba, Takayuki
name: Ishibashi, Nobuyuki
Publisher: name: arXiv
Year: 2012
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: For a classical solution |Psi> in Witten's cubic string field theory, the gauge invariant observable  is conjectured to be equal to the difference of the one-point functions of the closed string state corresponding to V, between the trivial vacuum and the one described by |Psi>. For a static solution |Psi>, if V is taken to be the graviton vertex operator with vanishing momentum, the gauge invariant observable is expected to be proportional to the energy of |Psi>. We prove this relation assuming that |Psi> satisfies equation of motion and some regularity conditions. We discuss how this relation can be applied to various solutions obtained recently.
description: 27 pages; v5: minor revision in section 2, results unchanged
Energy Transport in a Shear Flow of Particles in a 2D Dusty Plasma
Creators: name: Feng, Yan
name: Goree, J.
name: Liu, Bin
Publisher: name: arXiv
Year: 2012
Subjects: subject: Plasma Physics (physics.plasm-ph)
subject: Soft Condensed Matter (cond-mat.soft)
subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences

description: A shear flow of particles in a laser-driven two-dimensional (2D) dusty plasma are observed in a further study of viscous heating and thermal conduction. Video imaging and particle tracking yields particle velocity data, which we convert into continuum data, presented as three spatial profiles: mean particle velocity (i.e., flow velocity), mean-square particle velocity, and mean-square fluctuations of particle velocity. These profiles and their derivatives allow a spatially-resolved determination of each term in the energy and momentum continuity equations, which we use for two purposes. First, by balancing these terms so that their sum (i.e., residual) is minimized while varying viscosity $η$ and thermal conductivity $κ$ as free parameters, we simultaneously obtain values for $η$ and $κ$ in the same experiment. Second, by comparing the viscous heating and thermal conduction terms, we obtain a spatially-resolved characterization of the viscous heating.
description: 11 pages, 9 figures, Physical Review E in press (2012)
Measuring Velocities of the Sun’s Ionized Magnetic Loops to Understand Coronal Heating
Creators: name: Chung, Jessica
name: Meraga, Pranav
name: Poland, Art
Publisher: name: Journal of Student-Scientists' Research
Year: 2022

description: Our Sun is the largest laboratory in our solar system, holding information unattainable in any experiment made on Earth. One of the thousands of phenomena in solar physics we are experimenting with is: Why is the outermost atmosphere of the sun, the Corona, far hotter than the surface? Despite the spatial barriers preventing us from encountering the sun, we were able to use remote sensing to derive impactful data using the Extreme-Ultraviolet Imaging Spectrometer (EIS) of the Hinode Satellite. The satellite provided us with spectra of magnetic loops within the Corona. From these spectral lines, we used the tools provided in IDL, an interactive computer language, to fit the spectral lines and utilized the Doppler Shift equation to determine the velocities of plasma in magnetic loops at various points. By documenting the velocities, we have measured an essential variable of the Conservation of Mass, Momentum, and Energy equations, which allows us to determine the heating rate in these loops. Our observations can be compared with theoretical models to understand the source of energy generation in the outer solar atmosphere.
description: Journal of Student-Scientists' Research, Vol. 4 (2022)
Breaking of factorization of two-particle correlations in hydrodynamics
Creators: name: Gardim, Fernando G.
name: Grassi, Frederique
name: Luzum, Matthew
name: Ollitrault, Jean-Yves
Publisher: name: arXiv
Year: 2012
Subjects: subject: Nuclear Theory (nucl-th)
subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: The system formed in ultrarelativistic heavy-ion collisions behaves as a nearly-perfect fluid. This collective behavior is probed experimentally by two-particle azimuthal correlations, which are typically averaged over the properties of one particle in each pair. In this Letter, we argue that much additional information is contained in the detailed structure of the correlation. In particular, the correlation matrix exhibits an approximate factorization in transverse momentum, which is taken as a strong evidence for the hydrodynamic picture, while deviations from the factorized form are taken as a signal of intrinsic, "nonflow" correlations. We show that hydrodynamics in fact predicts factorization breaking as a natural consequence of initial state fluctuations and averaging over events. We derive the general inequality relations that hold if flow dominates, and which are saturated if the matrix factorizes. For transverse momenta up to 5 GeV, these inequalities are satisfied in data, but not saturated. We find at least as large factorization breaking in event-by-event ideal hydrodynamic calculations as in data, and argue that this phenomenon opens a new window on the study of initial fluctuations.
description: 5 pages, 2 figures. Minor revision
Additional file 4 of High mobility group box 1 and a network of other biomolecules influence fatigue in patients with Crohn’s disease
Creators: name: Kvivik, Ingeborg
name: Grimstad, Tore
name: Bårdsen, Kjetil
name: Jonsson, Grete
name: Kvaløy, Jan Terje
name: Omdal, Roald
Publisher: name: figshare
Year: 2023
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 4: Table S4. Amount of variation explained by each component in the model including fVAS in an unsupervised principal component analysis of 52 patients with Crohn’s disease.