cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Dithinozercon Berlese 1916
Creators: name: Halliday, R. B.
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Mesostigmata
Dithinozerconidae
Dithinozercon

description: Dithinozercon Berlese, 1916
Thinozercon (Dithinozercon) Berlese, 1916c: 295.
Type species Thinozercon (Dithinozercon) halberti Berlese, 1916c: 295, by original designation.
Notes. According to Hirschmann & Zirngiebl-Nicol (1967), Thinozercon (Dithinozercon) halberti Berlese, 1916 is a synonym of Celaeno infirma Berlese, 1888a: 5 and Apionoseius dubiosus Vitzthum, 1924b: 12.
description: Published as part of Halliday, R. B., 2015, Catalogue of genera and their type species in the mite Suborder Uropodina (Acari: Mesostigmata), pp. 101-147 in Zootaxa 3972 (2) on page 113, DOI: 10.11646/zootaxa.3972.2.1, http://zenodo.org/record/232777
Additional file 4: of Growth-rate dependency of de novo resveratrol
            production in chemostat cultures of an engineered Saccharomyces
                cerevisiae strain
Creators: name: Vos, Tim
name: CortĂŠs, Pilar De La Torre
name: Gulik, Walter Van
name: Pronk, Jack
name: Daran-Lapujade, Pascale
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biophysics
subject: Biochemistry
subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Computational Biology

description: Additional reactions for incorporation of resveratrol biosynthesis in the stoichiometric model.
Whole-genome sequencing reveals two prolonged simultaneous outbreaks involving Pseudomonas aeruginosa high-risk strains ST111 and ST235 with resistance to quaternary ammonium compounds
Creators: name: Rath, A.
name: Kieninger, B.
name: Fritsch, J.
name: Caplunik-Pratsch, A.
name: Blaas, S.
name: Ochmann, M.
name: Pfeifer, M.
name: Hartl, J.
name: Holzmann, T.
name: Schneider-Brachert, W.
Publisher: name: Universität Regensburg
Year: 2024
Subjects: subject: Pseudomonas aeruginosa, Infection control, Outbreak, Water drain, WGS
subject: 610 Medizin

description: Objective
Water-bearing systems are known as frequent Pseudomonas aeruginosa (PA) outbreak sources. However, many older buildings continue to have sanitary facilities in high-risk departments such as the ICU. We present two simultaneous prolonged multi-drug-resistant (MDR) PA outbreaks detected at the ICU of a pulmonology hospital, which were resolved by whole-genome sequencing (WGS).
Methods
Outbreak management and investigations were initiated in August 2019 after detecting two patients with nosocomial VIM-2-positive MDR PA. The investigations involved weekly patient screenings for four months and extensive environmental sampling for 15 months. All patient and environmental isolates were collected and analysed by WGS.
Results
From April to September 2019, we identified 10 patients with nosocomial MDR PA, including five VIM-2-positive strains. VIM-2-positive strains were also detected in nine sink drains, two toilets, and a cleaning bucket. WGS revealed that of 16 VIM-2-positive isolates, 14 were ST111 that carried qacE, or qacEΔ1 genes, whereas 13 isolates clustered (difference of ≤11 alleles by cgMLST). OXA-2 (two toilets), and OXA-2, OXA-74, PER-1 (two patients, three toilets) qacEΔ1-positive ST235 isolates dominated among VIM-2-negative isolates. The remaining seven PA strains were ST17, ST233, ST273, ST309 and ST446. Outbreak containment was achieved by replacing U-bends, and cleaning buckets, and switching from quaternary ammonium compounds (QUATs) to oxygen-releasing disinfectant products.
Conclusion
Comprehension and management of two simultaneous MDR PA outbreaks involving the high-risk strains ST111 and ST235 were facilitated by precise control due to identification of different outbreak sources per strain, and by the in-silico detection of high-level QUATs resistance in all isolates.
Additional file 1 of Phantom and clinical evaluation of the Bayesian penalised likelihood reconstruction algorithm Q.Clear without PSF correction in amyloid PET images
Creators: name: Wagatsuma, Kei
name: Sakata, Muneyuki
name: Miwa, Kenta
name: Hamano, Yumi
name: Kawakami, Hirofumi
name: Kamitaka, Yuto
name: Yamao, Tensho
name: Miyaji, Noriaki
name: Ishibashi, Kenji
name: Tago, Tetsuro
name: Toyohara, Jun
name: Ishii, Kenji
Publisher: name: figshare
Year: 2024
Subjects: subject: Artificial Intelligence and Image Processing
subject: FOS: Computer and information sciences

description: Additional file 1. Table S1: Volume of VOI template in CortexID Suite for amyloid imaging
Diurodinychus Berlese 1916
Creators: name: Halliday, R. B.
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Mesostigmata
Urodinychidae
Diurodinychus

description: Diurodinychus Berlese, 1916
Urodinychus (Diurodinychus) Berlese, 1916a: 27.
Type species Urodiaspis (Diurodinychus) rectangulovatus Berlese, 1916a: 27, by original designation.
description: Published as part of Halliday, R. B., 2015, Catalogue of genera and their type species in the mite Suborder Uropodina (Acari: Mesostigmata), pp. 101-147 in Zootaxa 3972 (2) on page 113, DOI: 10.11646/zootaxa.3972.2.1, http://zenodo.org/record/232777
Additional file 2: Table S2. of Peripheral artery disease and exertional leg symptoms in diabetes patients in Ghana
Creators: name: Kwame Yeboah
name: Puplampu, Peter
name: Ainuson, Joana
name: Akpalu, Josephine
name: Gyan, Ben
name: Amoah, Albert
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Marine Biology
subject: Science Policy
subject: 60506 Virology
subject: Computational Biology

description: Characteristics of study participants by leg symptoms. (DOCX 13Â kb)
Pristidia Deeleman-Reinhold 2001
Creators: name: Yu, Hao
name: Sun, Zixuan
name: Zhang, Guren
Publisher: name: Zenodo
Year: 2012
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Clubionidae
Pristidia

description: Genus Pristidia Deeleman-Reinhold, 2001
Diagnosis. Pristidia species can be easily recognized by the slender body (distinctively long and cylindrical abdomen), in association with the characteristic genital organs. The male palp has a claw-like embolus. The female epigyne has a relatively large and roundish disc, through which spermathecae and bursae are prominently visible; a dark insemination ducts running parallel between spermathecae and bursae; spermathecae located anteriorly and connected to postiorly bursae via short ducts; bursae reveal a creased, ribbed appearance, sandwiched between ventral epigynal plate and semi-translucent dorsal plate (Deeleman-Reinhold 2001).
Distribution. South East Asia (Thailand, Malaysia, Sumatra, Java and Borneo) and China (Jiangxi). The new record presented here extends the known range of this genus to the north.
description: Published as part of Yu, Hao, Sun, Zixuan & Zhang, Guren, 2012, New taxonomic data on the sac spiders (Arachnida: Araneae: Clubionidae) from China, with description of a new species, pp. 44-60 in Zootaxa 3299 on page 45, DOI: 10.5281/zenodo.246146
Additional file 3: of Growth-rate dependency of de novo resveratrol
            production in chemostat cultures of an engineered Saccharomyces
                cerevisiae strain
Creators: name: Vos, Tim
name: CortĂŠs, Pilar De La Torre
name: Gulik, Walter Van
name: Pronk, Jack
name: Daran-Lapujade, Pascale
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biophysics
subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Physiology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology

description: Figure S3. Averaged normalized gene expression of housekeeping genes1 for S. cerevisiae strain FS09322 and CEN.PK113-7D. Dotted bars indicate 20Â % variation around normalized expression. 1Teste MA, Duquenne M, Francois JM, Parrou JL: Validation of reference genes for quantitative expression analysis by real-time RT-PCR in Saccharomyces cerevisiae. BMC Mol Biol 2009, 10:99.
Dobrogensisnenteria Hirschmann 1985
Creators: name: Halliday, R. B.
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Mesostigmata
Nenteriidae
Dobrogensisnenteria

description: Dobrogensisnenteria Hirschmann, 1985
Dobrogensisnenteria Hirschmann, 1985a: 10.
Type species Nenteria dobrogensis Feider & Hutu, 1971: 335, by original designation.
description: Published as part of Halliday, R. B., 2015, Catalogue of genera and their type species in the mite Suborder Uropodina (Acari: Mesostigmata), pp. 101-147 in Zootaxa 3972 (2) on page 113, DOI: 10.11646/zootaxa.3972.2.1, http://zenodo.org/record/232777
Additional file 1: of Association between drug intake and incidence of malignancies in patients with Juvenile Idiopathic Arthritis: a nested case–control study
Creators: name: Barth, Swaantje
name: Schlichtiger, Jenny
name: Bisdorff, Betty
name: Hügle, Boris
name: Michels, Hartmut
name: Radon, Katja
name: Johannes-Peter Haas
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Ecology
subject: Developmental Biology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Intake and duration of rheumatic drugs. (DOCX 28 kb)
Optimal effective concentration combinations (OPECCs) for binary application of membrane-targeting antiseptics and TMPyP-mediated antimicrobial photodynamic therapy
Creators: name: Maisch, Tim
name: Scholz, Konstantin J.
name: Forster, Eva-Maria
name: Wenzl, Verena
name: Auer, David L.
name: Cieplik, Fabian
name: Hiller, Karl-Anton
Publisher: name: Universität Regensburg
Year: 2023
Subjects: subject: Antiseptics · Antimicrobial photodynamic therapy · aPDT · Binary · OPECC · Synergy
subject: 610 Medizin

description: The widespread occurrence of multi-resistant bacteria is a health problem of global dimension. Infections caused by multi-resistant pathogens are difficult to treat and often associated with high mortality. Therefore, new treatment strategies are of interest, such as the use of differently acting antibacterial concepts. One of these new concepts is the use of antiseptics in combination with the antibacterial photodynamic therapy (aPDT). Currently, no method has yet been established as a standard procedure for investigating combined effects and evaluating them in a generally valid and unambiguous manner. The focus of this study was on how cationic antiseptics benzalkonium chloride (BAC) and chlorhexidine digluconate (CHX) behave in a combined application with aPDT using the photosensitizer TMPyP. For this purpose, BAC and CHX were applied in combination with the aPDT using TMPyP in non-lethal concentrations to the three bacteria Escherichia coli, Staphylococcus aureus, and Enterococcus faecalis. The results of the combination experiments with sublethal concentrations of BAC or CHX with the aPDT showed that the binary application had a lethal effect. Irrespective of the bacteria, the reduction in concentrations in OPECC, compared to individual concentrations, was more than 50% for TMPyP, 23–40% for BAC, and 18–43% for CHX. Furthermore, the optimal effective concentration combinations (OPECCs) could be determined. The latter showed that the combined application allowed the reduction of both concentrations compared to the single application.
Dynurella Athias-Binche 1988
Creators: name: Halliday, R. B.
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Mesostigmata
Trachyuropodidae
Dynurella

description: Dynurella Athias-Binche, 1988
Janetiella (Dynurella) Athias-Binche, 1988: 15.
Type species Janetiella (Dynurella) stoechas Athias-Binche, 1988: 15, by monotypy.
description: Published as part of Halliday, R. B., 2015, Catalogue of genera and their type species in the mite Suborder Uropodina (Acari: Mesostigmata), pp. 101-147 in Zootaxa 3972 (2) on page 113, DOI: 10.11646/zootaxa.3972.2.1, http://zenodo.org/record/232777
Endogenous Sox8 is a critical factor for timely remyelination and oligodendroglial cell repletion in the cuprizone model
Creators: name: Freudenstein, David
name: Lippert, Magdalena
name: Popp, Janina Sophie
name: Aprato, Jessica
name: Wegner, Michael
name: Sock, Elisabeth
name: Haase, Stefanie
name: Linker, Ralf A.
name: González Alvarado, María Nazareth
Publisher: name: Universität Regensburg
Year: 2023
Subjects: subject: 610 Medizin

description: Genome-wide association studies identified a single nucleotide polymorphism (SNP) downstream of the transcription factor Sox8, associated with an increased risk of multiple sclerosis (MS). Sox8 is known to influence oligodendrocyte terminal differentiation and is involved in myelin maintenance by mature oligodendrocytes. The possible link of a Sox8 related SNP and MS risk, along with the role of Sox8 in oligodendrocyte physiology prompted us to investigate its relevance during de- and remyelination using the cuprizone model. Sox8−/− mice and wildtype littermates received a cuprizone diet for 5 weeks (wk). Sox8−/− mice showed reduced motor performance and weight compared to wildtype controls. Brains were histologically analysed at the maximum of demyelination (wk 5) and on two time points during remyelination (wk 5.5 and wk 6) for oligodendroglial, astroglial, microglial and myelin markers. We identified reduced proliferation of oligodendrocyte precursor cells at wk 5 as well as reduced numbers of mature oligodendrocytes in Sox8−/− mice at wk 6. Moreover, analysis of myelin markers revealed a delay in remyelination in the Sox8−/− group, demonstrating the potential importance of Sox8 in remyelination processes. Our findings present, for the first time, compelling evidence of a significant role of Sox8 in the context of a disease model.
Additional file 1 of A loss-of-function AGTR1 variant in a critically-ill infant with renal tubular dysgenesis: case presentation and literature review
Creators: name: Al-Maraghi, Aljazi
name: Aamer, Waleed
name: Ziab, Mubarak
name: Aliyev, Elbay
name: Elbashir, Najwa
name: Hussein, Sura
name: Palaniswamy, Sasirekha
name: Anand, Dhullipala
name: Love, Donald R.
name: Charles, Adrian
name: A.S.Akil, Ammira
name: Fakhro, Khalid A.
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Supplementary Material 1.
Analysis of intestinal bacterial diversity and its gene function prediction in black-capped capuchin (Sapajus apella)
Creators: name: Yu, Jinghe
name: Bai, Gaowa
name: He, Yuxing
name: Liu, Mingchao
name: Yang, Xiaofeng
name: Li, Jiao
name: Shen, Yue
name: Lu, Shoufeng
name: Bao, Wuyundalai
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: In this study, we used high-throughput sequencing technology to analyze the diversity and predict gene function of intestinal bacteria from captive black-capped capuchin in two wildlife parks. The results showed that the composition of intestinal gut bacterial diversity was significantly higher in black-capped capuchins monkeys from ES than HT. Moreover, high similarity of intestinal bacteria of black-capped capuchins at the same site was found by sample stratum clustering. Black-capped capuchins intestinal bacteria can be clustered into 2296 ASVs, belonging to 16 phyla, 99 families and 210 genera, respectively. The dominant phyla were Bacteroidota and Firmicutes in the intestinal bacteria of black-capped capuchins, but there were differences in the dominant bacterial families and dominant bacterial genera between ES and HT, and the bacterial families with significant differences had correspondence with bacterial genera. The results provide a basis for the study of intestinal bacteria in black-capped capuchins and the isolation and purification of dominant bacteria. The results of this study fill the gap in the study of intestinal bacterial diversity and its gene functions in black-capped capuchins, and provide a reference for the isolation of dominant bacteria in black-capped capuchins’ intestinal microbes and the discovery and study of novel functional genes.
Bioactive adrenomedullin and interleukin-6 in COVID-19: potential biomarkers of acute kidney injury and critical illness
Creators: name: Leininger, Simon B.
name: Staudner, Stephan T.
name: Vogel, Manuel J.
name: Mustroph, Julian
name: Hubauer, Ute
name: Wallner, Stefan
name: Lehn, Petra
name: Burkhardt, Ralph
name: Meindl, Christine
name: Hanses, Frank
name: Zimmermann, Markus
name: Maier, Lars S.
name: Hupf, Julian
name: Jungbauer, Carsten G.
Publisher: name: Universität Regensburg
Year: 2024
Subjects: subject: COVID-19, SARS-CoV-2, Adrenomedullin, Interleukin-6, Acute Kidney Injury
subject: 610 Medizin

description: Background
The aim of this study was to investigate whether bioactive adrenomedullin (bio-ADM) and interleukin-6 (IL-6) are related to acute kidney injury (AKI) and severe illness in COVID-19 patients.
Methods
153 patients with COVID-19 admitted to the emergency department (ED) were included. Blood samples were collected from each patient at admission. Bio-ADM and IL-6, as well as DPP3 and routinely measured markers were evaluated regarding the endpoints AKI (22/128 hospitalized patients) and a composite endpoint of admission to intensive care unit and/or in-hospital death (n = 26/153 patients).
Results
Bio-ADM and IL-6 were significantly elevated in COVID-19 patients with AKI compared to COVID-19 patients without AKI (each p < 0.001). According to ROC analyses IL-6 and bio-ADM had the largest AUC (0.84 and 0.81) regarding the detection of AKI.
Furthermore, bio-ADM and IL-6 were significantly elevated in COVID-19 patients reaching the composite endpoint (each p < 0.001). Regarding the composite endpoint ROC analysis showed an AUC of 0.89 for IL-6 and 0.83 for bio-ADM in COVID-19 patients.
In the multivariable logistic model bio-ADM and IL-6 presented as independent significant predictors regarding both endpoints AKI and the composite endpoint in COVID-19 patients (as well as creatinine regarding the composite endpoint; each p < 0.05), opposite to leukocytes, C-reactive protein (CRP) and dipeptidyl peptidase 3 (DPP3; each p = n.s.).
Conclusion
Elevated levels of bio-ADM and IL-6 are associated with AKI and critical illness in patients with COVID-19. Therefore, both biomarkers may be potential tools in risk stratification in COVID-19 patients at presentation in the ED.
Investigations of morphological development, digestive enzymes and microbiome of the gastrointestinal tract in goat kids from birth to adulthood
Creators: name: Wu, Qiong
name: Zeng, Deshou
name: Niu, Zhili
name: Yang, Xunye
name: Liu, Yingming
name: Yin, Fuquan
name: Zhao, Zhihui
name: Chai, Jianmin
name: Gao, Zhenhua
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Developmental Biology

description: The development of gastrointestinal tracts in goats after birth is critical for establishment of digestion and absorption function, growth, immunity and health of adults. However, this process from birthday to adulthood is lacking. This study was conducted to determine the anatomical, morphological, physiological and microbiome development of the gastrointestinal tract of Leizhou goats. The weights of rumen, reticulum, omasum and abomasum increased with age. The weights of each intestinal segment increased with age. The length and width of rumen papilla, muscular thickness, cuticle thickness and wall thickness were significantly increased with developmental stage. Consistently, the villus length and width and crypt depth of the small intestine increased significantly with age. The volatile fatty acids (VFAs) concentration in both rumen and caecum increased with ages. Specifically, VFAs were not detected at birthday rumen, while they showed in caecum. The activities of digestive enzymes in both rumen and caecum had a similar pattern with VFAs. The microbial diversity and composition were distinct between the rumen and caecum after birth. We observed a rapid influx of microbes in rumen and caecum at birthday and gradually changed from 1 month of age to adulthood. This study provides insights into feeding and health maintenance strategies.
title: Collective Resistance, Ancestrality and Black Women’s Power
Creators: name: Borges, Luna
name: Dodoo, Melody
name: Tibrewala, Muskan
name: Gabriel, Wellington 'Dinho'
Publisher: name: Fachinformationsdienst für internationale und interdisziplinäre Rechtsforschung
Year: 2024
Subjects: subject: 341

description: Völkerrechtsblog
Additional file 1: of Growth-rate dependency of de novo resveratrol
            production in chemostat cultures of an engineered Saccharomyces
                cerevisiae strain
Creators: name: Vos, Tim
name: CortĂŠs, Pilar De La Torre
name: Gulik, Walter Van
name: Pronk, Jack
name: Daran-Lapujade, Pascale
Publisher: name: Figshare
Year: 2015
Subjects: subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Sociology
subject: FOS: Sociology

description: Figure S1. Specific CO2 production and specific O2 uptake rates of the resveratrol producing S. cerevisiae strain FS09322 and the isogenic strain CEN.PK113-7D. Closed symbols indicate the resveratrol producing S. cerevisiae strain FS09322.Â Open symbols indicate isogenic strain CEN.PK113-7D.Â Each data point represents results from an individual chemostat.
Gryllotalpa Latreille 1802
Creators: name: Tan, Ming Kai
Publisher: name: Zenodo
Year: 2012
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Lathiceridae
Gryllotalpa

description: Genus Gryllotalpa Latreille, 1802
Gryllotalpa Latreille, 1802: 275. Type species: Gryllus Acheta gryllotalpa Linnaeus Curtilla Oken, 1815: 445. Type species: Gryllus Acheta gryllotalpa Linnaeus Austrotalpa Mjöberg, 1913. Type species: Austrotalpa pluvialis Mjöberg
description: Published as part of Tan, Ming Kai, 2012, New species and redescriptions of mole crickets (Orthoptera: Gryllotalpidae: Gryllotalpinae) from Singapore, with key to Singaporean species, pp. 51-60 in Zootaxa 3389 on page 52, DOI: 10.5281/zenodo.211999
Additional file 2: Table S1. of High prevalence and predominance of BRCA1 germline mutations in Pakistani triple-negative breast cancer patients
Creators: name: Rashid, Muhammad
name: Muhammad, Noor
name: Seerat Bajwa
name: Faisal, Saima
name: Tahseen, Muhammad
name: Bermejo, Justo
name: Amin, Asim
name: Loya, Asif
name: Hamann, Ute
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Deleterious BRCA1/2 germline mutations in Pakistani patients with TNBC. (DOCX 24Â kb)
Additional file 1: of Cohort profile: Women’s Healthy Ageing Project (WHAP) - a longitudinal prospective study of Australian women since 1990
Creators: name: Szoeke, Cassandra
name: Coulson, Melissa
name: Campbell, Stephen
name: Dennerstein, Lorraine
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Changes to the instrumentation and assay techniques for blood biomarker analysis across two decades of the Women’s Healthy Ageing Project.ᅟ(DOCX 13 kb)
Gryllotalpa fulvipes Saussure 1877
Creators: name: Tan, Ming Kai
Publisher: name: Zenodo
Year: 2012
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Lathiceridae
Gryllotalpa
Gryllotalpa fulvipes

description: Gryllotalpa fulvipes Saussure, 1877
(Figs. 2 E, 2F, 2I; 6)
Gryllotalpa fulvipes Saussure, 1877: 35
Gryllotalpa nigripennis Chopard, 1929: 368 Material examined. Singapore, 2 males, Bukit Timah Nature Reserve, along Dairy Farm Loop and Hindhede Way, secondary forest, coll. M. K. Tan & J. J. Y. Chan, 3 May.2011, 25 May.2011 (all ZRC).
Remark. This species was collected during the recent survey. This permits the redescription of the species, in particular, the venation of male tegmen according to Béthoux (2012). While the genitalia was not described in Chopard (1968), the illustration is clear and is similar to the new specimens collected from Singapore. Holotype from Singapore was not examined.
Additionally, stridulating male specimens from Singapore were located acoustically and collected from the ground, one of which (from Dairy Farm Loop) was found near the foot of a tree. D. H. Murphy’s specimen was also collected in similar condition. This further shows that this species is not strictly cavernicolous (Chopard, 1968).
Redescription. Habitus as shown in Fig. 6.
Male. Tegmen 1.4 times longer than wide (n=1), reaching end of the 7th abdominal tergite. Venations of right tegmen in dorsal and ventral views as shown in Figs. 2 E & 2F respectively; harp very broad at base, strongly tapering in the medial area (c and CuA+CuPa subparallel), medial and distal area narrow with distal margin obtuse and rounded, with diving vein closer to CuA+CuPa than c; cell 2 small, longer than wide, about as wide as harp at distal end, with 3 veins emerging from CuPaβ and CuPaα2 (1 and 2 respectively); radius vein not diverged into RA and RP. Stridulatory file gently sinuate, medial region slightly arched basally; with about 29 teeth plus 1 indistinct teeth at anterior end (n=1); teeth fairly evenly distributed, particularly the median region, more densely distributed at the ends, particularly the anterior end (Fig. 2 I).
Measurements. See Table 2.
Conservation status. This species was listed as endangered in Singapore and presumed confined to primary forest (Davision et al., 2008). The specimens collected in 2011 represent the first recordings from the secondary forest of Singapore. Male calls were heard frequently at certain nights in May 2011 but were not heard thereafter.
As a result of inappropriate knowledge on the population of this species, it is difficult to assess the conservation status of this mole cricket.
BL PL PW RTL RTW HFL HTL SFL NST Male 20.7 6.8 4.8 8.7 - 7.4 5.0 - - (3 May)
Male 20.3 6.6 5.0 9.0 6.6 7.0 4.8 2.6 29+1 (25 May)
Mean (n = 2) 20.5 6.7 4.9 8.9 - 7.2 4.9 - -
description: Published as part of Tan, Ming Kai, 2012, New species and redescriptions of mole crickets (Orthoptera: Gryllotalpidae: Gryllotalpinae) from Singapore, with key to Singaporean species, pp. 51-60 in Zootaxa 3389 on pages 57-59, DOI: 10.5281/zenodo.211999
Dyscritaspis Camin 1953
Creators: name: Halliday, R. B.
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Mesostigmata
Polyaspididae
Dyscritaspis

description: Dyscritaspis Camin, 1953
Dyscritaspis Camin, 1953: 345.
Type species Dyscritaspis whartoni Camin, 1953: 346, by original designation.
Notes. The genus name has been incorrectly spelled as Dyscritiaspis and Dyskritaspis by some authors.
description: Published as part of Halliday, R. B., 2015, Catalogue of genera and their type species in the mite Suborder Uropodina (Acari: Mesostigmata), pp. 101-147 in Zootaxa 3972 (2) on page 113, DOI: 10.11646/zootaxa.3972.2.1, http://zenodo.org/record/232777
Diagnosing lagophthalmos using artificial intelligence
Creators: name: Knoedler, Leonard
name: Alfertshofer, Michael
name: Simon, Siddharth
name: Prantl, Lukas
name: Kehrer, Andreas
name: Hoch, Cosima C.
name: Knoedler, Samuel
name: Lamby, Philipp
Publisher: name: Universität Regensburg
Year: 2023
Subjects: subject: 610 Medizin

description: Lagophthalmos is the incomplete closure of the eyelids posing the risk of corneal ulceration and blindness. Lagophthalmos is a common symptom of various pathologies. We aimed to program a convolutional neural network to automatize lagophthalmos diagnosis. From June 2019 to May 2021, prospective data acquisition was performed on 30 patients seen at the Department of Plastic, Hand, and Reconstructive Surgery at the University Hospital Regensburg, Germany (IRB reference number: 20-2081-101). In addition, comparative data were gathered from 10 healthy patients as the control group. The training set comprised 826 images, while the validation and testing sets consisted of 91 patient images each. Validation accuracy was 97.8% over the span of 64 epochs. The model was trained for 17.3 min. For training and validation, an average loss of 0.304 and 0.358 and a final loss of 0.276 and 0.157 were noted. The testing accuracy was observed to be 93.41% with a loss of 0.221. This study proposes a novel application for rapid and reliable lagophthalmos diagnosis. Our CNN-based approach combines effective anti-overfitting strategies, short training times, and high accuracy levels. Ultimately, this tool carries high translational potential to facilitate the physician’s workflow and improve overall lagophthalmos patient care.
Additional file 1: of High prevalence and predominance of BRCA1 germline mutations in Pakistani triple-negative breast cancer patients
Creators: name: Rashid, Muhammad
name: Muhammad, Noor
name: Seerat Bajwa
name: Faisal, Saima
name: Tahseen, Muhammad
name: Bermejo, Justo
name: Amin, Asim
name: Loya, Asif
name: Hamann, Ute
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Supplementary methods BRCA mutation analyses. (DOCX 17Â kb)
MOESM3 of Inducible gene expression system by 3-hydroxypropionic acid
Creators: name: Shengfang Zhou
name: Ainala, Satish
name: Eunhee Seol
name: Nguyen, Trinh
name: Sunghoon Park
Publisher: name: Figshare
Year: 2015
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Additional file 3: Table S3. Primers used for RT PCR in this study.
Additional file 2: Table S2. of Bioinformatics approach to predict target genes for dysregulated microRNAs in hepatocellular carcinoma: study on a chemically-induced HCC mouse model
Creators: name: Vecchio, Filippo Del
name: Gallo, Francesco
name: Antinisca Di Marco
name: Mastroiaco, Valentina
name: Caianiello, Pasquale
name: Zazzeroni, Francesca
name: Alesse, Edoardo
name: Tessitore, Alessandra
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer

description: The group of fifteen top target genes inferred from target prediction analysis. A table comprising the fifteen top target genes for the miR 125a-5p, miR-193b, miR-182 and miR-27a, retrieved from at least 50 % of prediction softwares used. (DOCX 11 kb)
MOESM1 of Inducible gene expression system by 3-hydroxypropionic acid
Creators: name: Shengfang Zhou
name: Ainala, Satish
name: Eunhee Seol
name: Nguyen, Trinh
name: Sunghoon Park
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Table S1. Comparison of sequence homologies between C3-operon proteins from P. denitrificans and other organisms.
Eesti kirikute liikmeskonna usulised tõekspidamised ja praktikad uuringu „Elust, usust ja usuelust 2020“ tulemuste põhjal
Creators: name: Soom, Kaido
Publisher: name: Usuteaduslik Ajakiri
Year: 2024

description: The aim of this article is to analyse the worldview of Estonian Christians based on the survey] „Life, Faith and Religion 2020“.


Analysing the results of the survey, it is found that 22% of the Estonian population belongs to a congregation and the number of people belonging to Christian congregations is 19% of the Estonian population. Of those belonging to religious movements, 43% are Lutheran and 35% Orthodox. Lutherans are primarily Estonians and Orthodox Christians non-Estonians. Of the people belonging to a church, 26% were over 70 years old and 36% of Christians have a higher education.
Among the respondents belonging to a congregation, 30% received a lot of religious knowledge at home, indicating that religious socialisation is still functioning. Half of the children of people belonging to the larger churches are unbaptised, indicating a break in socialisation. Furthermore, 81% of Christians believe in the existence of God. Acceptance of non-Christian doctrines has decreased significantly, especially among Christians. Explaining that 72% of Christians have experienced God’s guidance in their lives, with 33% praying daily and 18% attending weekly worship services. Both church members and non-church members expected above all that the church would talk about life and death and eternal issues. This survey shows that 43% of Christians actively participate in the Eucharist. More than three quarters of Christians attach importance to church Rites of passage.
description: Usuteaduslik Ajakiri, Vol. 86 No. 2 (2024)
Kiriku ja rahva ühiselt elamise kunst. Missioloogiline uurimus „Elust, usust ja usuelust 2020“ põhjal
Creators: name: Kurg, Ingmar
Publisher: name: Usuteaduslik Ajakiri
Year: 2024

description: The art of living together as church and people. A Missiological Analysis Based on the ‘On Life, Faith, and Religious Life 2020’ Study


The position of the church in contemporary society has been a constant focus of Estonian EUU research. It turns out that the church has supporters both within and outside the membership. Outside the church, the most positive attitudes are among the group of people who identify themselves as believers in God. This evidence has led to a key conclusion about the future focus of the church. It makes sense for the church to focus its attention and care on supporting people who believe in God. Missiologically, the importance of conviviality, i.e. the art of all parties in society living together, is well known. In this conviviality, i.e. the active communion of Church and people, is a guarantee of truthfulness as parrhesia, that is to say, speaking to one another openly and honestly,
description: Usuteaduslik Ajakiri, Vol. 86 No. 2 (2024)
Hiina serviis ja roosa elevant: kuninga paljast taguotsast surmalähikogemusteni
Creators: name: Karo, Roland
name: Parts, Annabel
Publisher: name: Usuteaduslik Ajakiri
Year: 2024

description: A Rare China Set and the Pink Elephant: from the King’s Naked Butt to Near-Death Experiences


In this paper, we address two interdependent epistemological presumptions in the study of Near-Death Experiences (NDEs), one of which is almost entirely hidden but has an enormous impact on how to interpret the existing empirical evidence. These are: 1) that since consciousness is a brain function, NDEs have to be explained in terms of brain activity; 2) that except for one or another characteristic deviation the rest of the brain works more or less normally during the NDEs. We show that both presumptions run directly against the existing empirical evidence and that neither of them is necessary. We then develop a model that views NDEs on two axes, based on the continuity and discontinuity elements of the reported cases with respect to normal waking consciousness. We arrive at the conclusion that consciousness is better understood as mediated rather than generated by the brain which in turn leads us to propose that traditional substance dualism may deserve more credit than previously believed. The last, highly exploratory section of the paper attempts a „positive program“ on how to interpret the arguments proposed on a broader scale.
description: Usuteaduslik Ajakiri, Vol. 87 No. 3 (2024)
Additional file 1: of Physiological and transcriptional analyses of developmental stages along sugarcane leaf
Creators: name: Mattiello, Lucia
name: Riaño-Pachón, Diego
name: Martins, Marina
name: Cruz, Larissa Da
name: Bassi, Denis
name: Marchiori, Paulo
name: Ribeiro, Rafael
name: Mônica Labate
name: Labate, Carlos
name: Menossi, Marcelo
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: Developmental Biology
subject: Plant Biology
subject: Computational Biology

description: It is comprised by 13 Additional figures and methodologies that complement the data presented in the manuscript. Figure S1. Distribution of leaf length. Figure S2. Phenotype of 60 days-old plants. Figure S3. Planning for sample collection. Additional Methodology of leaf gas exchange and photochemistry evaluation on the B and M segments: on this supplemental topic we described the methodology used to produce Additional Fig. 4 and 5. Figure S4. Light response curves for different leaf segments. Figure S5. Responses of leaf CO2 assimilation to increasing intercellular CO2 concentration (Ci) for different leaf segments. Figure S6. Stomata counting in 2 cm segments of sugarcane leaf. Figure S7. Venn Diagram representing groups of orthologous genes shared between the five species (Sorghum bicolor, Setaria italica, Saccharum sp. SP80-3280, Oryza sativa and Zea mays). Figure S8. Protein content of sugarcane leaf segments. Figure S9. Expression patterns exhibited by the 14 genes identified in all contrasts (Figure 5 on the manuscript). Figure S10. Water content. Figure S11. Phylogenetic tree of the Trehalose 6-Phosphate Synthase family. Figure S12. Expression pattern of cell wall related genes. Figure S13. Expression pattern of genes peaking at segment M. Additional References. References of the Methodology of Gas exchange and fluorescence evaluation. (DOCX 6742 kb)
Additional file 8: of High throughput techniques to reveal the molecular physiology and evolution of digestion in spiders
Creators: name: Fuzita, Felipe
name: Pinkse, Martijn
name: Patane, José
name: Verhaert, Peter
name: Lopes, Adriana
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Ecology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Enrichment analysis of GO terms using Fisher’s exact test. (a) One hour fed versus fasting spiders (transcriptome data). (b) Nine hours fed versus fasting spiders (transcriptome data). (c) All DF samples versus total MD (fasting and fed) proteomes. (PDF 159 kb)
Direct Hospital Costs per Case of Periprosthetic Hip and Knee Joint Infections in Europe — A Systematic Review
Creators: name: Szymski, Dominik
name: Walter, Nike
name: Hierl, Katja
name: Rupp, Markus
name: Alt, Volker
Publisher: name: Universität Regensburg
Year: 2024
Subjects: subject: PJI, periprosthetic infection, costs, hip, knee, DAIR
subject: 610 Medizin

description: Background
The rise of periprosthetic joint infections (PJIs) due to aging populations is steadily increasing the number of arthroplasties and treatment costs. This study analyzed the direct health care costs of PJI for total hip arthroplasty and total knee arthroplasty (TKA) in Europe.
Methods
The databases PubMed, Scopus, Embase, Cochrane, and Google Scholar were systematically screened for direct costs of PJI in Europe. Publications that defined the joint site and the procedure performed were further analyzed. Mean direct health care costs were calculated for debridement, antibiotics, and implant retention (DAIR), one-stage, and 2-stage revisions for hip and knee PJI, respectively. Costs were adjusted for inflation rates and reported in US-Dollar (USD).
Results
Of 1,374 eligible publications, 12 manuscripts were included in the final analysis after an abstract and full-text review. Mean direct costs of $32,933 were identified for all types of revision procedures for knee PJI. The mean direct treatment cost including DAIR for TKA after PJI was $19,476. For 2-stage revisions of TKA, the mean total cost was $37,980. For all types of hip PJI procedures, mean direct hospital costs were $28,904. For hip DAIR, one-stage and 2-stage treatment average costs of $7,120, $44,594, and $42,166 were identified, respectively.
Conclusions
Periprosthetic joint infections are associated with substantial direct health care costs. As detailed reports on the cost of PJI are scarce and of limited quality, more detailed financial data on the cost of PJI treatment are urgently required.
MOESM1 of Metabolic syndrome is independently associated with increased 20-year mortality in patients with stable coronary artery disease
Creators: name: Younis, Arwa
name: Younis, Anan
name: Tzur, Boaz
name: Peled, Yael
name: Shlomo, Nir
name: Goldenberg, Ilan
name: Fisman, Enrique
name: Tenenbaum, Alexander
name: Klempfner, Robert
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Computational Biology

description: Additional file 1: Table S1. Differences between the MetS definitions in terms of their individual components.
Additional file 1: of Uncovering obsessive-compulsive disorder risk genes in a pediatric cohort by high-resolution analysis of copy number variation
Creators: name: Gazzellone, Matthew
name: Zarrei, Mehdi
name: Burton, Christie
name: Walker, Susan
name: Uddin, Mohammed
name: S. Shaheen
name: Coste, Julie
name: Rageen Rajendram
name: Schachter, Reva
name: Colasanto, Marlena
name: Hanna, Gregory
name: Rosenberg, David
name: Soreni, Noam
name: Fitzgerald, Kate
name: Marshall, Christian
name: Buchanan, Janet
name: Merico, Daniele
name: Arnold, Paul
name: Scherer, Stephen
Publisher: name: Figshare
Year: 2016
Subjects: subject: Molecular Biology
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Supplementary Information. (DOCX 292Â kb)
THE POST-COVID TRANSITION FROM ALGEBRA I TO II
Creators: name: Selin Mutlu
Publisher: name: Zenodo
Year: 2024
Subjects: algebra
pandemic
mathematics
self-efficacy
academic self-efficacy

description: This study aimed to determine if A: the COVID-19 pandemic played any role in the academic self-efficacy (ASE) of students taking Algebra II of the Class of 2025 in New York State (NYS), and B: if the change in ASE correlated with students’ work performances, adhering to the Bandura theory of self-efficacy. Prior research indicates that the pandemic has indeed played a role in negatively influencing students' ASE, considering its restriction on learning and the struggle of schools to get back on their feet. Research has yet to be conducted on how the pandemic specifically shaped the ASE of students taking a capstone course, considering that schools shut down when the students took the introductory course. Research has also yet to be conducted on how this change has influenced individual work performance in high school students. Data was collected through the distribution of a survey, including qualitative analysis. Quantitative analysis questions were applied through Likert-scale questions using the ASES and IWPQ scales to determine if the initial hypothesis was true, that the pandemic adversely influenced both scales. A percentage difference test was first used to see if there was any difference between the ASES scores in the survey and another study examining ASES scores before the pandemic. Spearman’s rank coefficient of correlation test was used to see if there was any correlation or significance between the ASES and IWPQ scores received from participants in my survey. Multiple conclusions were made from this study, with one being that there was a significant percent difference between the ASES scores of my survey and the ASES scores of studies performed before the pandemic, proving that the pandemic must play some role in the loss of ASE for students. Secondly, there was a moderately positive correlation between ASES and IWPQ scores, proving that the change in ASE affected a student’s perception of their work performance. This information further adds to the body of knowledge on the correlation between the pandemic and ASE for students, along with its change in work performance, to a more specific extent. More studies should be conducted replicating this research to focus on how the pandemic shaped ASE for different genders, races, or religions, as well as testing on grades below the Class of 2025 since the sudden change in learning algebra might also impact them. If this research is further studied, the limitations found in this research should be considered, such as the smaller sample size analyzed and the limited time to conduct the study. However, they should still be able to yield similar results to this study.
BО'LAJAK TIBBIУОT XОDIMLARINING ASОSIУ TIL MALAKALARINI TAKОMILLASHTIRISH USULLARI
Creators: name: Raximova, Nigora
Publisher: name: Zenodo
Year: 2023

description: Ushbu tezisda bo’lajak tibbiyot xodimlarining asosiy til malakalarini takomillashtirish masalalari muhokama qilingan. Tibbiyotda muvaffaqiyatli faoliyat yuritish uchun kommunikatsiya ko’nikmalari va tibbiy terminologiyani mukammal o’zlashtirish muhim ahamiyatga ega. Maqolada til malakalarini rivojlantirishning o’ziga xos usullari, jumladan, interfaol mashg’ulotlar, simulyatsiyalar, kasbiy muloqot bo’yicha treninglar va lingvistik texnologiyalarni qo’llashning samaradorligi tahlil qilinadi. Shuningdek, til ko’nikmalarining bemorlar bilan muloqotda, ilmiy tadqiqotlarda va xalqaro hamkorlikda tutgan o’rni va bu boradagi dolzarb muammolar yoritilgan.