cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
title: Remote sensing for the observation of senescence in Conference pear trees
Creators: name: Paladini, Laura
name: Delalieux, Stephanie
name: Tits, Laurent
name: Somers, Ben
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: phenology, senescence, pear, Sentinel-2, remote sensing
subject: 004
subject: 570
subject: 580
subject: 590
subject: 600
subject: 630

description: Leaf senescence in trees is the phenological stage during which nutrient resorption happens. In this process, part of the nutrients is transferred to the perennial organs of the plant, contributing to tree vitality and, in pome fruit trees, to flowering intensity the following year. Another share of the nutrients remains inside leaf litter and enters the agroecosystem’s nutrient cycles. The timing and duration of leaf senescence influences the ratio between the two parts of nutrients and thus influences nutrient cycles in the agroecosystem. Among innovative techniques to investigate these processes, satellite remote sensing has proved a valid tool in natural ecosystems. The same cannot be said about fruit orchards, because of the image quality of the satellites active before Sentinel-2, often deemed insufficient for agricultural studies. The features of Sentinel-2, instead, offer new possibilities for monitoring phenology in agricultural environments. This research aims to study senescence in Conference pear trees, in three regions of Flanders (Belgium). One cloud-free Sentinel-2 image, acquired in the middle of the senescence period, was analysed, by means of different spectral indices. Ground data was collected through a network of 34 webcams with an RGB camera. A visual analysis was performed, to determine the beginning of senescence (the moment in which the first yellow/red leaves appear in the canopy) and the end of senescence (the moment in which the entire canopy turns yellow/red). Webcam data showed that leaf (dis)colouration started between September and October, during a one-month time span. Full discolouration of the canopy, occurring at the end of November, was instead more synchronous. Moreover, some trees only turned yellow, while others showed red leaves, probably a stress indicator. Sentinel-2 data revealed that spectral indices correlate well with the date of the beginning of senescence, thus suggesting that it would possible to map it. These results already offer evidence that monitoring variability in the dynamics of senescence is possible from satellite remote sensing. Current focus is on the link between canopy colour, as it appears in the webcam imagery, and satellite data.
description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World
Flat-Space Chiral Gravity
Creators: name: Bagchi, Arjun
name: Detournay, Stephane
name: Grumiller, Daniel
Publisher: name: arXiv
Year: 2012
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We provide the first evidence for a holographic correspondence between a gravitational theory in flat space and a specific unitary field theory in one dimension lower. The gravitational theory is a flat-space limit of topologically massive gravity in three dimensions at Chern-Simons level k=1. The field theory is a chiral two-dimensional conformal field theory with central charge c=24.
description: 5 pages, v2: minor rearrangements
Titelei
Creators: name: Redaktion, Die
Publisher: name: Germania : Anzeiger der Römisch-Germanischen Kommission des Deutschen Archäologischen Instituts
Year: 2019

description: -
description: Germania : Anzeiger der Römisch-Germanischen Kommission des Deutschen Archäologischen Instituts, Bd. 78 Nr. 1 (2000)
Additional file 1 of The effect of home visits as an additional recruitment step on the composition of the final sample: a cross-sectional analysis in two study centers of the German National Cohort (NAKO)
Creators: name: Krist, Lilian
name: Bedir, Ahmed
name: Fricke, Julia
name: Kluttig, Alexander
name: Mikolajczyk, Rafael
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Science Policy

description: Additional file 1: Supplementary Figure 1. Recruitment process of the German National Cohort (NAKO)
Biautomatic Structures on Groups via Group Actions
Creators: name: Trivedi, Vandit
Publisher: name: The Australian National University
Year: 2022
Subjects: automatic and biautomatic groups
group action
CAT(0) cube complex
systolic simplicial complex

description: Automatic groups are a special class of groups in which the word problem is decidable. It is not known whether every automatic group is biautomatic. The problem of obtaining an automatic or biautomatic structure assumes relevance in the interest of efficient computation in such groups. In this thesis, we introduce automatic and biautomatic groups, after which we consider methods to determine a biautomatic structure on a group through a group action on a geometric object. We conclude with an account of the result that $ \text{Aut}(B_{4}) $ is biautomatic.
Functional Interpretation of Transcriptome and Translatome Dynamics In Cancer
Creators: name: Reixachs, Marina
Publisher: name: The Australian National University
Year: 2023

description: The differential production of transcript isoforms from gene loci is a key cellular mechanism. Yet, its impact on protein production remains an open question. We describe new methodologies developed to address this question in the context of cancer. We present a new computational tool for the translation quantification of individual transcript isoforms using ribosome-protected mRNA fragments. Analysis of samples from glia and glioma uncovered a widespread and evolutionarily conserved impact of differential splicing on translation with potential functional relevance in brain cancer. Furthermore, we describe the analysis of the dynamics of the transcriptome in B-cell acute leukaemia (B-ALL), where a significant proportion of patients still have a dismal prognosis due to yet undetermined mechanisms. We identified an expression signature that is common in patients with fusions associated with poor outcomes. This signature led us to uncover a network of splicing factors potentially controlling the splicing of genes associated with high risk. Our findings provide evidence for a convergent mechanism of aberrant RNA processing that sustains a malignant phenotype in a subset of gene-fusion-driven B-ALL cases.
Inhalt
Creators: name: Redaktion, Die
Publisher: name: Germania : Anzeiger der Römisch-Germanischen Kommission des Deutschen Archäologischen Instituts
Year: 2019

description: -
description: Germania : Anzeiger der Römisch-Germanischen Kommission des Deutschen Archäologischen Instituts, Bd. 78 Nr. 1 (2000)
Deep learning for surrogate modelling of neXtSIM
Creators: name: Durand, Charlotte
name: Finn, Tobias
name: Farchi, Alban
name: Bocquet, Marc
name: Òlason, Einar
Publisher: name: Zenodo
Year: 2023
Subjects: Deep learning
Sea-ice Physics
Sea-ice thickness
Surrogate modeling

description: Contribution to the "11th Sea Ice data assimilation workshop in Oslo". This presentation describes the advance in the work from my PhD.
description: This work is a contribution to the project SASIP (grant no. 353), funded by Schmidt Futures – a philanthropic initiative that seeks to improve societal outcomes through the development of emerging science and technologies.
title: Specimen-GT tool: Ground Truth Annotation tool for herbarium Specimen images
Creators: name: Bouaziz, Bassem
name: Ben Ali, Rochdi
name: Trikki, Abdelaziz
name: Gaikwad, Jitendra
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: 004
subject: 570
subject: 590
subject: 600
subject: 630

description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World, vol. Poster
title: Analyzing the effect of armed conflict, agriculture and fire on the movement and migratory behaviour of white eared kob and Roan antelope in the Boma-Gambella landscape of Ethiopia and South Sudan
Creators: name: Abera, Kassahun
name: Bekele, Afework
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: 004
subject: 570
subject: 580
subject: 590
subject: 600
subject: 630

description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World, vol. Poster
The universality of the Efimov three-body parameter
Creators: name: D'Incao, J. P.
name: Wang, J.
name: Esry, B. D.
name: Greene, C. H.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: Atomic Physics (physics.atom-ph)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: In this paper we discuss the recent discovery of the universality of the three-body parameter (3BP) from Efimov physics. This new result was identified by recent experimental observations in ultracold quantum gases where the value of the s-wave scattering length, $a=a_-$, at which the first Efimov resonance is created was found to be nearly the same for a range of atomic species --- if scaled as $a_-/r_{\rm vdW}$, where $r_{\rm vdW}$ is the van der Waals length. Here, we discuss some of the physical principles related to these observations that emerge from solving the three-body problem with van der Waals interactions in the hyperspherical formalism. We also demonstrate the strong three-body multichannel nature of the problem and the importance of properly accounting for nonadiabatic effects.
description: 5 pages, 2 figures; Presented at the 20th International IUPAP Conference on Few-Body Problems in Physics, 20 - 25 August, 2012, Fukuoka, Japan
title: Extraction of terms highly associated with named rivers
Creators: name: Rojas-García, Juan
name: Batista-Navarro, Riza
name: Faber, Pamela
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: 004
subject: 570
subject: 580
subject: 590
subject: 600
subject: 630

description: EcoLexicon is an electronic, multilingual, terminological knowledge base on environmental sciences, whose flexible design permits the contextualization of data so that they are more relevant to specific subdomains and geographic areas. However, to facilitate the geographic contextualization of concepts such as those belonging to the semantic category of LANDFORM, it is necessary to know what terms are semantically related to each type of landform according to the research papers published by experts, and how those terms are related to each other. This paper describes a semi-automatic method for extracting knowledge about terms related to rivers as a type of landform, from a specialized corpus of English Environmental Science texts. A GeoNames database dump was first applied to automatically match the sequences of words in the corpus which are the proper names of rivers. For all the named rivers recognized in the corpus, their respective geographic coordinates, i.e. longitude and latitude, were automatically retrieved from the GeoNames database dump and then automatically visualized on top of a static map. This type of visualization accounted for the representativeness of the corpus in reference to the location of rivers and the number of times that they were mentioned. Moreover, a hierarchical clustering technique was deployed in order to group the named rivers, based on their latitude and longitude. This allowed us to automatically annotate each river with the geographical area it belongs to. For each river, the contexts in which it appeared were automatically retrieved in such a way that all the contexts contained complete sentences. Subsequently, the subcorpus of contexts was lemmatized. The multi-word terms, automatically collected from EcoLexicon, were automatically matched in the corpus and joined with underscores. Then, a document term matrix of co-occurrences was obtained, and the terms in the columns transformed into binary variables. Finally, the clustering technique ROCK for categorical variables was adopted to group the named rivers, based on the terms related to them, as reflected in the corpus data. The preliminary results show that there is a slight association between the geographical areas of the named rivers and the processes mentioned by researchers affecting them. Once these experimental results were validated by Coastal Engineering experts, the knowledge extracted with this method facilitates the geographical contextualization of EcoLexicon with regard to rivers, in the sense that a specific named river can be linked to its more highly associated terms dealt with in the corpus data.
description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World
Jörg Orschiedt, Manipulationen an menschlichen Skelettresten
Creators: name: Peter-Röcher, Heidi
Publisher: name: Germania : Anzeiger der Römisch-Germanischen Kommission des Deutschen Archäologischen Instituts
Year: 2019

description: Jörg Orschiedt, Manipulationen an menschlichen Skelettresten. Taphonomische Prozesse,
Sekundärbestattungen oder Kannibalismus? Urgeschichtliche Materialhefte, Band 13. Mo
Vince Verlag, Tübingen 1999. ISBN 3-9804834-7-9. 525 Seiten mit
41 Abbildungen, 22 Tabellen, 51 Tafeln und zahlreichen Skelettschemata.
description: Germania : Anzeiger der Römisch-Germanischen Kommission des Deutschen Archäologischen Instituts, Bd. 70 Nr. 2 (2001)
title: Towards FAIR data within the Biodiversity Exploratories
Creators: name: Ostrowski, Andreas
name: Fürstenau, Cornelia
name: Petzold, Eleonora
name: Zander, Franziska
name: König-Ries, Birgitta
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: 004
subject: 570
subject: 580
subject: 590
subject: 600
subject: 630

description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World, vol. Poster
Additional file 2 of The effect of home visits as an additional recruitment step on the composition of the final sample: a cross-sectional analysis in two study centers of the German National Cohort (NAKO)
Creators: name: Krist, Lilian
name: Bedir, Ahmed
name: Fricke, Julia
name: Kluttig, Alexander
name: Mikolajczyk, Rafael
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Science Policy

description: Additional file 2: Supplementary Table 1. Characteristics of participants recruited in waves 1-3 (invitation, 1st, and 2nd reminder vs. 3rd reminder) and participants recruited in waves 4-5 (invitation, 1st, and 2nd reminder vs. home visits)
Incorporating fermions in the Gaussian Effective Potential: the Higgs-Top Sector
Creators: name: Siringo, Fabio
Publisher: name: arXiv
Year: 2012
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: The Higgs-Top model is studied by a non-perturbative variational extension of the Gaussian Effective Potential that incorporates fermions. In the limit of a very strong Yukawa coupling the one-loop result is shown to follow a single-parameter scaling while the gaussian fluctuations give rise to important deviations from scaling and to a reduction of the vev and of the top mass. A good general agreement is found with lattice data when a comparison can be made. The vacuum is shown to be stable for any choice of the Yukawa coupling, at variance with renormalized perturbation theory. Analytical results are provided for few observables like the renormalized mass of the Higgs boson and its wave function renormalization constant. Extensions to gauge theories like QCD are briefly discussed.
description: A brief discussion on vacuum stability and few references have been added in the new version
title: Citizen science and science-policy interface: Towards sustainable forest managements
Creators: name: Kohsaka, Ryo
name: Kajima, Shuichiro
name: Uchiyama, Yuta
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: Citizen science
subject: forest management
subject: policy transfer
subject: participatory monitoring
subject: Japan
subject: 004
subject: 570
subject: 580
subject: 590
subject: 600
subject: 630

description: The forest policy research with quantitative approaches is limited especially in the research fields of policy transfer and science-policy interface at the local government level. As a context of the citizen science and the science-policy interface, the attitudes of the Japanese local governments vary from municipality to municipality. For example, certain local governments proactively introduce participation of citizen in forest policy making and its implementation, while such attitudes or policies are absent for others. Where comes such differences amongst municipalities? This study conducts empirical analysis at local policy level, which has been largely overseen. In concrete terms, trends of adoption of local ordinances of forest planning in Japanese prefectures and participatory monitoring activities in forest lands are reviewed and analyzed. This study examines the relationships between political factors, social economic factors, and policy diffusion. We have looked at the various factors including local demographics, size of administrative areas, government structure, percentage of forest lands and net forestry production in local government to examine the differences. The results reveal the significant impacts of behavior of neighboring local governments. In other words, if a neighboring body acts, others will follow. The perceptions of the governors who are not from conservative political party seems to be a factor to motivate local governments to introduce the local ordinances of forest planning which encourage citizen to participate forest managements and forest policy making processes. Furthermore, participatory monitoring is a useful tool in citizen science and the number of biodiversity monitoring activities is increasing in Japan as well as other Asian countries such as Korea. The local ordinances of forest planning can influence the monitoring activities. The focus of recent monitoring activities based on citizen science in Japan is changing from “scientists use citizens as data collectors” to “citizens as scientists” under the recent development of data science. Alternatively, sharing, collecting and analyzing data in effective manner with participations remains as future challenges for data science.
description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World
Additional file 3 of The effect of home visits as an additional recruitment step on the composition of the final sample: a cross-sectional analysis in two study centers of the German National Cohort (NAKO)
Creators: name: Krist, Lilian
name: Bedir, Ahmed
name: Fricke, Julia
name: Kluttig, Alexander
name: Mikolajczyk, Rafael
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Science Policy

description: Additional file 3: Supplementary Table 2. Comparison of educational levels between NAKO participants (Halle/Saale) and respective census data (all numbers are divided by within-group total)
title: Single-molecule studies of nucleic acid folding and nucleic acid-protein interactions
Creators: name: Pérez González, Daniel Cibrán
Publisher: name: University of St Andrews
Year: 2017

description: Nucleic acids and proteins, some of the building blocks of life, are not static structures but highly dynamic entities that need to interact with one another to meet cellular demands. The work presented in this thesis focuses on the application of highly sensitive fluorescence methods, both at ensemble and single-molecule level, to determine the dynamics and structure of specific biomolecular interactions with nanometer resolution and in temporal scales from nanoseconds to minutes, which includes most biologically relevant processes. The main aims of my PhD can be classified in three areas: i) exploring new fluorescent sensors with increased specificity for certain nucleic acid structures; ii) understanding how some of these nucleic acids sense the presence of small molecules in the cellular environment and trigger gene regulation by altering their structure; and iii) understanding how certain molecular machines, such as helicase proteins, are able to unwind the DNA double helix by using chemical energy in the form of ATP hydrolysis.
title: Beyond Data and Quality – Unleashing the Value of Citizen Contributions
Creators: name: Klan, Friederike
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: Citizen Science
subject: Data Science
subject: FAIR data
subject: data quality
subject: 004
subject: 570
subject: 580
subject: 590
subject: 600
subject: 630

description: Citizen Science projects generate outcomes that have the potential to be highly valuable both for science and society. Those contributions are not restricted to data, but can be other kinds of results, e.g. best practices, new insights or research questions. Letting Citizen Science have a true impact requires us to unleash the value of citizen contributions. This touches a wide range of points and goes beyond mere data quality considerations. Challenges include, but are not restricted to • How cannot just data, but other outcomes of Citizen Science projects be captured and made accessible to others? • How to make sure that citizen contributions are findable, accessible and interpretable by others and how to enable interoperability with other data and knowledge sources (i.e. adhere to the FAIR-Principles)? • How to assess and improve the quality and reliability of Citizen Science outcomes and increase their credibility? • How to make sure that data collected by citizen scientists are useful and relevant for addressing scientific questions? • How to enable citizen scientists to gain and apply insights from project outcomes? This talk is meant as an impulse for further discussion and scholarly exchange on these topics to foster a systematic approach to address these challenges.
description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World
title: Query Processing in Ontology Based Data Access
Creators: name: Askar, Majid
name: Algergawy, Alsayed
name: Soliman, Taysir
name: König-Ries, Birgitta
name: Sewisy, Adel
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: 004
subject: 570
subject: 590
subject: 600
subject: 630

description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World, vol. Poster
Parallel ACO with a Ring Neighborhood for Dynamic TSP
Creators: name: Pintea, Camelia-M.
name: Crisan, Gloria Cerasela
name: Manea, Mihai
Publisher: name: arXiv
Year: 2012
Subjects: subject: Artificial Intelligence (cs.AI)
subject: FOS: Computer and information sciences
subject: I.2.11; G.2.1; G.2.2
subject: 90C27, 68T10, 68T20

description: The current paper introduces a new parallel computing technique based on ant colony optimization for a dynamic routing problem. In the dynamic traveling salesman problem the distances between cities as travel times are no longer fixed. The new technique uses a parallel model for a problem variant that allows a slight movement of nodes within their Neighborhoods. The algorithm is tested with success on several large data sets.
description: 8 pages, 1 figure; accepted J. Information Technology Research
Constraining dark energy using observational growth rate data
Creators: name: Shi, K.
name: Huang, Y. F.
name: Lu, T.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: Observational growth rate data had been derived from observations of redshift distortions in galaxy redshift surveys. Here we use the growth rate data to place constraints on the dark energy model parameters. By performing a joint analysis with the Type Ia supernova, baryon acoustic oscillation and cosmic microwave background data, it is found that the growth rate data are useful for improving the constraints. The joint constraints show that the $Λ$CDM model is still in good agreement with current observations, although a time-variant dark energy still cannot be ruled out. It is argued that the growth rate data are helpful for understanding the dark energy. With more accurate data available in the future, we will have a powerful tool for constraining the cosmological and dark energy parameters.
description: 28 pages, 7 figures, accepted for publication in Physics Letters B
title: Mobile app and platform development in citizen science
Creators: name: Sturm, Ulrike
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: Citizen Science
subject: mobile app and platform development
subject: participant centred design
subject: 004
subject: 570
subject: 580
subject: 590
subject: 600
subject: 630

description: In the past two decades citizen science is increasingly perceived and acknowledged. However data quality concerns, occur when data are provided by many, mostly anonymous people. Data produced by volunteers can have high quality, depending on task difficulty and volunteer experience. Therefore it is especially important to use and develop suitable methods and data collection tools that support participants. Meanwhile digital technologies are more and more used for data collection and management. Hence support for planning, design and data management of mobile apps and platforms in the citizen science community is needed. We developed 43 recommendations during two workshops, where citizen science practitioners with experience in mobile application and web-platform development and implementation came together [1]. I will present these recommendations and demonstrate their implementation using the example of the mobile app “Naturblick”. The smartphone app “Naturblick” was developed with a user centred approach and is being continuously improved based on users’ feedback of both the content and technology. Users are able to identify animals and plants and share observations. For species identification we developed auditory and visual pattern recognition tools and multi-access identification keys for animals and plants. As part of the citizen science project “Forschungsfall Nachtigall” (nightingale research case) participants record nightingale songs with “Naturblick”. The recordings are analysed in regard to song dialects and habitat preferences.
description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World
Additional file 4 of The effect of home visits as an additional recruitment step on the composition of the final sample: a cross-sectional analysis in two study centers of the German National Cohort (NAKO)
Creators: name: Krist, Lilian
name: Bedir, Ahmed
name: Fricke, Julia
name: Kluttig, Alexander
name: Mikolajczyk, Rafael
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Science Policy

description: Additional file 4: Supplementary Table 3. Comparison of educational levels between NAKO participants of Turkish descent (Berlin-Center) and respective census data (all numbers are divided by within-group total)
title: Towards Semantic Data Management in LifeWatch Italy: the Phytoplankton Study Case
Creators: name: Fiore, Nicola
name: Bergami, Caterina
name: Carrubba, Carla
name: Oggioni, Alessandro
name: Rosati, Ilaria
name: Stanca, Elena
name: Tagliolato, Paolo
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: 004
subject: 570
subject: 580
subject: 590
subject: 600
subject: 630

description: LifeWatch Italy, the Italian node of LifeWatch-ERIC, has promoted and stimulated the debate on the use of semantic in the biodiversity data management. Actually, information from biodiversity and ecosystems is very heterogeneous and needs to be better managed in order to improve the actual scientific knowledge, as well as to address the urgent societal challenges concerning environmental issues. Here we present the Phytoplankton Study Case, where the semantic approach was used to address data harmonisation, integration and discovery. An interdisciplinary team of LifeWatch Italy has developed a thesaurus on phytoplankton functional traits and linked its concepts to other existing conceptual schema related to the specific domain. In the meantime, the team has produced the LifeWatch Core Ontology, a customization of the OBOE core ontology, for the semantic description/capture of basic concepts and relationships in ecological studies. This framework ontology is based on 7 main concepts (classes) as Domain, Entity, Observation, Characteristic, Measurement, Protocol, Standard, providing a structured yet generic approach for semantic data annotation, and for developing domain-specific ecological ontologies as the Phytoplankton Trait Ontology (PhyTO). To date, LifeWatch e-Infrastructure stores and manages data and metadata using an mix of Database Management Systems (the Relational MySQL and the NoSQL MONGO DB); for the purpose of the study case, we selected the VIRTUOSO Triple Store as semantic repository and we developed different modules to automate the management workflow. A first software module has been developed to allow the data annotation with classes, subclasses and properties of the PhyTO (i.e. Semantic Annotation). The designed module allows to map metadata and data stored in the LifeWatch Data Portal with the OWL schema of the PhyTO and to produce .rdf output files. A second developed module uses as input the .rdf files and store the data in the VIRTUOSO Graph to make them available for the semantic search. Moreover, a user-friendly search interface (i.e. Java Portlet) has been implemented to retrieve annotated data with queries suggested by the data users. This approach facilitates data discovery and integration, and can provide guidance for, and automate, data aggregation and summary.
description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World
Gervaise Pignat/Ariane Winiger, Les occupations mésolithiques de l’abri du Mollendruz
Creators: name: Schäfer, Dieter
Publisher: name: Germania : Anzeiger der Römisch-Germanischen Kommission des Deutschen Archäologischen Instituts
Year: 2019

description: Rezension zu: Gervaise Pignat/Ariane Winiger, Les occupations mésolithiques de l’abri du Mollendruz.
Abri Freymond commune de Mont-La-Ville (VD, Suisse). Avec des contributions
de Jehanne Affolter, Louis Chaix, Markus Fischer, Philippe Rentzel, Werner Schoch.
Cahiers d’Archéologie Romande No. 72, Lausanne 1998. ISBN 2-
88028-M072-9. 248 Seiten, 16 Tafeln und 220 Abbildungen.
description: Germania : Anzeiger der Römisch-Germanischen Kommission des Deutschen Archäologischen Instituts, Bd. 70 Nr. 2 (2001)
title: PlanktonID – Combining deep learning, in situ imaging and citizen science to resolve the distribution of zooplanktonin major upwelling regions
Creators: name: Kiko, Rainer
name: Christiansen, Svenja
name: Schröder, Simon-Martin
name: Koch, Reinhard
name: Stemmann, Lars
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: Citizen Science
subject: Network
subject: Plankton
subject: Deep Learning
subject: Rhizaria
subject: Global distribution
subject: 004
subject: 570
subject: 580
subject: 590
subject: 600
subject: 630

description: Recent publications revealed the global importance of single-celled zooplankton, belonging to the super group Rhizaria and highlighted the need of in-situ imaging to study these fragile organisms. The advance of in situ plankton imaging techniques leads to increasing amounts of image data sets that require identification to different taxonomic levels. Automatic classification by computer algorithms provides the means for fast data availability, however the accuracy of those algorithms still requires manual identification by humans. We combined state of the art automatic image classification by convolutional neural networks (deep learning) with a citizen science project to classify a large dataset of ~ 3 million images from an Underwater Vision Profiler 5 (UVP5). On our website https://planktonid.geomar.de, citizen scientists can confirm or reject the automatic assignment of UVP5 images to different plankton categories in a memory-like game. Inbuilt quality controls and multiple validations per image enable scientific analysis of the citizen science data. In total more than 500 users have validated more than 300.000 images until now. We will present further data on citizen scientist engagement, data quality assessment and the distribution analysis of large protists (Rhizaria) in the Mauretanian, Benguela and Humboldt Current upwelling systems.
description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World
No Line on the Horizon: On Uniform Acceleration and Gluonic Fields at Strong Coupling
Creators: name: Garcia, J. Antonio
name: Guijosa, Alberto
name: Pulido, Eric J.
Publisher: name: arXiv
Year: 2012
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We study a few assorted questions about the behavior of strings on anti-de Sitter spacetime (AdS), or equivalently, `flux tubes' in strongly-coupled conformal field theories (CFTs). For the case where the `flux tube' is sourced by a uniformly accelerated quark (or, more generally, a quark that asymptotes to uniform acceleration in the remote past), we point out that the dual string embedding known heretofore terminates unphysically at the worldsheet horizon, and identify the correct continuation, which is found to encode a gluonic shock wave. For arbitrary quark motion, we show that, contrary to common understanding, the worldsheet horizon does not in general represent a dividing line between the portions of the string respectively dual to the quark and to the gluonic radiation emitted by it.
description: 1+24 pages, 11 figures; v2: minor changes, including addition of footnote 4
title: Content-based Image Retrieval for Biodiversity: A Comparative Study
Creators: name: Youssef, Nora
name: Algergawy, Alsayed
name: Moawad, Ibrahim
name: M. EL-Horbaty, EL-Sayed
name: Elgohary, Rania
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: 004
subject: 570
subject: 580
subject: 590
subject: 600
subject: 630

description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World, vol. Poster
title: sMon - Trend analysis of German biodiversity data
Creators: name: Bonn, Aletta
name: Eichenberg, David
name: Bruelheide, Helge
name: Jansen, Florian
name: Winter, Marten
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: 004
subject: 570
subject: 580
subject: 590
subject: 600
subject: 630

description: Most biodiversity data are collected by volunteers organised in natural history societies or citizen science projects, often closely aligned with (sub )national agencies and local authorities. Data may be heterogeneous in space, time and quality. Here, we present first results of trend analyses of joint work with German natural history societies and state and national conservation agencies through the sMon synthesis project within iDiv. We combine and harmonize exemplary datasets of different taxa and habitats to evaluate the potentials and limits for analysing changes in the state of biodiversity in Germany. We show trend analyses of occupancy frequency data for 60 dragonfly, 42 grasshopper species and amphibia across 3 federal states 1980-2015, using Bayesian hierarchical trend analyses that build on occupancy detection models. Based on these insights and evaluation of citizen science programmes globally, we derive principles for good practice citizen science project design, data collection and archiving and explore methodologies that can deal with fragmented data of different spatio-temporal resolution and quality. This includes harnessing the potentials offered by modern technology. Combined with experiences of joint working of volunteer experts, agencies and academic scientists, this informs perspectives for future biodiversity monitoring programmes in Germany.
description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World
Inhalt
Creators: name: Redaktion, Die
Publisher: name: Germania : Anzeiger der Römisch-Germanischen Kommission des Deutschen Archäologischen Instituts
Year: 2019

description: -
description: Germania : Anzeiger der Römisch-Germanischen Kommission des Deutschen Archäologischen Instituts, Bd. 80 Nr. 1 (2002)
title: Using and reusing the monumental past in the late antique Mediterranean West, 300-600
Creators: name: Underwood, Douglas R.
Publisher: name: University of St Andrews
Year: 2015

description: Scholarship on late antique cities has largely conceptualized them as singular entities, either decaying or transitioning as Roman imperial power and economic structures shifted. Improved archaeological data from urban sites, accompanied by a number of broad synthetic studies, now allow for fresh exploration of the details of urbanism in this transformative era. This study examines the ways that a select group of public buildings were used and reused in the Mediterranean West between 300 and 600 CE. This examination is primarily carried out through the collection of a broad catalogue of archaeological evidence (supplemented with epigraphic and literary testimony) for the constructions, work projects, abandonments and reuses of key public monuments across the Western Mediterranean region—principally Italy, southern Gaul, Spain, and North Africa west of Cyrenaica. This broad survey is augmented with case studies on select cities. Such an analysis of the late antique histories of baths, aqueducts, and spectacle buildings (theaters, amphitheaters, and circuses) shows that each of the building types had a distinct history and that public monuments were not a unitary group. It also reveals unexpectedly few regional trends, suggesting that these histories were broadly common across the West. Further, this study shows that each building type was reused differently, both in terms of purposes and chronology. Finally, by considering economic, technological, cultural and legal factors affecting patterns of use, abandonment and reuse, this study establishes that the primary cause for the transformations to public building was largely a change in euergetistic practices in late antiquity. Cities with access to imperial or other governmental patronage used and maintained their public monuments longer than those without. Together these observations demonstrate the complexities of urban change in this period and prove that the idea of a single pattern of decline in late antique cities is no longer tenable.
Endopachys bulbosa Cairns & Zibrowius 1997
Creators: name: Cairns, S. D.
Publisher: name: Zenodo
Year: 2004
Subjects: Biodiversity
Taxonomy
Animalia
Cnidaria
Anthozoa
Scleractinia
Dendrophylliidae
Endopachys
Endopachys bulbosa

description: Endopachys bulbosa Cairns & Zibrowius, 1997 Endopachys bulbosa Cairns & Zibrowius, 1997: 186, figs. 27a–g (NT).– Cairns, 1998: 405, figs. 8k,l (WA). New records. None. Types. The holotype is deposited at MNHN; the remaining paratypes are split between MNHN and USNM. Type Locality: 9°02'10"S 132°43'05"E (off Cobourg Peninsula, Northern Territory), 239–250 m.
description: Published as part of Cairns, S. D., 2004, The Azooxanthellate Scleractinia (Coelenterata: Anthozoa) of Australia, pp. 259-329 in Records of the Australian Museum 56 on page 316
description: {"references": ["Cairns, S. D., 1998. Azooxanthellate Scleractinia (Cnidaria: Anthozoa) of Western Australia. Records of the Western Australian Museum 18: 361 - 417, 9 pls."]}
Christine Meyer-Freuler, Vindonissa Feuerwehrmagazin
Creators: name: Eschbaumer, Pia
Publisher: name: Germania : Anzeiger der Römisch-Germanischen Kommission des Deutschen Archäologischen Instituts
Year: 2019

description: Rezension zu: Christine Meyer-Freuler, Vindonissa Feuerwehrmagazin. Die Untersuchungen im mittleren
Bereich des Legionslagers. Mit Beiträgen von Hugo W. Doppler, Cornel Doswald,
Sylvia Fünfschilling sowie Atika Benghezal, Marino Maggetti und Giulio Galetti. Veröffentlichungen
der Gesellschaft Pro Vindonissa, Band 15. Aargauische Kantonsarchäologie,
Brugg 1998. ISBN 3-9521540-1-6. 311 Seiten mit zahlreichen Abbildungen und
Tabellen.
description: Germania : Anzeiger der Römisch-Germanischen Kommission des Deutschen Archäologischen Instituts, Bd. 80 Nr. 1 (2002)
Secular master equation for adiabatically time dependent systems
Creators: name: Kamleitner, I.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Relying only on first principles, we derive a master equation of Lindblad form generally applicable for adiabatically time dependent systems. Our analysis shows that the much debated secular approximation can be valid for slowly time dependent Hamiltonians when performed in an appropriate basis. We apply our approach to the well known Landau-Zener problem where we find that adiabaticity is improved by coupling to a low temperature environment.
description: 5 pages
title: Long-term ecoacoustic monitoring of a pristine coral reef: when data-intensive ecology responds to management objectives
Creators: name: Elise, Simon
name: Couëdel, Marion
name: Marinesque, Sophie
name: Bruggemann, Henrich
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: 004
subject: 570
subject: 580
subject: 600
subject: 630

description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World, vol. Poster
Die Verbreitung und Datierung kupferzeitlicher Silexbeile in Südosteuropa
Creators: name: Klimscha, Florian
Publisher: name: Germania : Anzeiger der Römisch-Germanischen Kommission des Deutschen Archäologischen Instituts
Year: 2019

description: -
description: Germania : Anzeiger der Römisch-Germanischen Kommission des Deutschen Archäologischen Instituts, Bd. 85 Nr. 2 (2007)
title: Dialkoxy-poly(para-phenylenethinylen)e
-
Morphologie und Anwendung
in organischen Feldeffekttransistoren
Creators: name: Schmid, Stefanie
Publisher: name: Heidelberg University Library
Year: 2017

description: Die vorliegende Dissertation beschäftigt sich mit der Darstellung, Untersuchung und Optimierung von PPEs im Hinblick auf ihre Anwendung als Halbleitermaterial in organischen Feldeffekttransistoren (OFETs). Speziell die morphologische Untersuchung der Dünnfilme wurde in den Fokus gerückt.
Zur Synthese der PPEs wurde die Sonogashira-Kupplung verwendet. Diese erlaubte die Einführung verschiedenster funktioneller Gruppen. Die gezielte Auswahl der Monomere erlaubte die Darstellung halbleitender Polymere mit unterschiedlichen elektronischen Eigenschaften, Löslichkeiten und Schmelzpunkten. Eine anschließende systematische Untersuchung der Halbleitereigenschaften im OFET zeigte, dass ein Zusammenhang zwischen der Polymerstruktur, der Kristallinität im Film und der Transistorleistung bestand. Im Vergleich wiesen PPEs mit linearen gegenüber verzweigten Seitenketten eine höhere Ordnung im Film auf und zeigten die höchsten Ladungsträgerbeweglichkeiten. 
Es wurden ausführliche Untersuchungen der vielversprechendsten PPEs, bezüglich ihrer Anwendung im Transistor, durchgeführt. Eine wichtige Rolle spielte die Filmmorphologie, welche auf verschiedene Art und Weisen beeinflusst wurde um eine erhöhte Ordnung der Polymerketten zu erzeugen. Dazu wurde die Abhängigkeit von der Temperatur, dem Substrat und dem Elektrodenmaterial im Transistor ausführlich analysiert. Anschließend wurde das Zusammenspiel verschiedener Komponenten im OFET verglichen und ein für PPEs optimierter Aufbau ausgewählt. Die vorliegende Arbeit lieferte auf diesem Weg ein Grundrezept für den Bau von PPE-basierten OFETs.
Abschließend sollte überprüft werden, ob für ein ‚perfektes‘, einheitliches PPE eine makroskopische Kristallisation des Filmes erreichbar wäre. Hierfür wurden definierte Oligo(para phenylenethinylen)e (OPEs) dargestellt. Das Hauptaugenmerk wurde dabei auf die Anordnung der OPEs im Festkörper und im Film, also auf die Morphologie, gelegt.
title: 'Bettered by the borrower': the use of historical extracts from twelfth-century historical works in three later twelfth- and thirteenth-century historical texts
Creators: name: Edwards, Jane Marian
Publisher: name: University of St Andrews
Year: 2015

description: This thesis takes as its starting point the use of extracts from the works of historical authors who wrote in England in the early to mid twelfth-century. It focuses upon the ways in which their works began to be incorporated into three particular texts in the later twelfth and early thirteenth centuries. Through the medium of individual case studies – De Abbatibus (Abingdon), CCCC 139 (Durham) and The London Collection three elements are explored (i) how mediaeval writers used extracts from the works of others in ways which differed from modern practices with their concerns over charges of plagiarism and unoriginality (ii) how the structural and narrative roles which the use of extracts played within the presentation of these texts (iii) how the application of approaches developed in the twentieth century, which transformed how texts are now analysed, enabled a re-evaluation and re-interpretation of their use of source material with greater sensitivity to their original purposes This analysis casts fresh light upon the how and why these texts were produced and the means by which they fulfilled their purposes and reveals that despite their disparate origins and individual perspectives these three texts share two common features: (i) they follow a common three stage pattern of development (ii) they deal with similar issues: factional insecurities and concerns about the quality of those in power over them – using an historical perspective The analysis also reveals the range of techniques which were at the disposal of the composers of these texts, dispelling any notion that they were either unsophisticated or naïve in their handling of their source materials. Together these texts demonstrate how mediaeval authors used combinations of extracts as a means of responding quickly and flexibly to address particular concerns. Such texts were not regarded as being set in stone but rather as fluid entities which could be recombined at will in order to produce new works as required.
title: Towards automatic identification of elephants in the wild
Creators: name: Körschens, Matthias
name: Barz, Björn
name: Denzler, Joachim
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: 004
subject: 570
subject: 580
subject: 590
subject: 600
subject: 630

description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World, vol. Poster