cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Multi-resolution community detection in massive networks
Creators: name: Han, Jihui
name: Li, Wei
name: Deng, Weibing
Publisher: name: arXiv
Year: 2016
Subjects: subject: Physics and Society (physics.soc-ph)
subject: Social and Information Networks (cs.SI)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: Aiming at improving the efficiency and accuracy of community detection in complex networks, we proposed a new algorithm, which is based on the idea that communities could be detected from subnetworks by comparing the internal and external cohesion of each subnetwork. In our method, similar nodes are firstly gathered into meta-communities, which are then decided to be retained or merged through a multilevel label propagation process, until all of them meet our community criterion. Our algorithm requires neither any priori information of communities nor optimization of any objective function. Experimental results on both synthetic and real-world networks show that, our algorithm performs quite well and runs extremely fast, compared with several other popular algorithms. By tuning a resolution parameter, we can also observe communities at different scales, so this could reveal the hierarchical structure of the network. To further explore the effectiveness of our method, we applied it to the E-Coli transcriptional regulatory network, and found that all the identified modules have strong structural and functional coherence.
description: 21 pages, 9 figures
Additional file 2 of Novel high-resolution targeted sequencing of the cervicovaginal microbiome
Creators: name: Andralojc, Karolina M.
name: Molina, Mariano A.
name: Qiu, Mengjie
name: Spruijtenburg, Bram
name: Rasing, Menno
name: Pater, Bernard
name: Huynen, Martijn A.
name: Dutilh, Bas E.
name: Ederveen, Thomas H. A.
name: Elmelik, Duaa
name: Siebers, Albert G.
name: Loopik, Diede
name: Bekkers, Ruud L. M.
name: Leenders, William P. J.
name: Melchers, Willem J. G.
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 2. List of smMIPs and sequences used for CiRNAseq profiling of the cervicovaginal microbiome (.pdf). List of designed 30 smMIPs with ligation and extension arms that target 434 relevant microbes in the cervicovaginal microbiome at the DNA and RNA levels using CiRNAseq.
The curious case of PDS 11: a nearby, >10 Myr old, classical T Tauri binary system
Creators: name: Mathew, Blesson
name: Manoj, P.
name: Bhatt, B. C.
name: Sahu, D. K.
name: Maheswar, G.
name: Muneer, S.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: We present results of our study of PDS 11 binary system, which belongs to a rare class of isolated, high galactic latitude T Tauri stars. Our spectroscopic analysis reveals that PDS 11 is a M2-M2 binary system with both components showing similar H-alpha emission strength. Both the components appear to be accreting, and are classical T Tauri stars. The lithium doublet Li I 6708 Angstrom, a signature of youth, is present in the spectrum of PDS 11A, but not in PDS 11B. From the application of lithium depletion boundary age-dating method and a comparison with the Li I 6708 equivalent width distribution of moving groups, we estimated an age of 10-15 Myr for PDS 11A. Comparison with pre-main sequence evolutionary models indicates that PDS 11A is a 0.4 solar mass T Tauri star at a distance of 114-131 pc. PDS 11 system does not appear to be associated with any known star forming regions or moving groups. PDS 11 is a new addition, after TWA 30 and LDS 5606, to the interesting class of old, dusty, wide binary classical T Tauri systems in which both components are actively accreting.
description: Accepted for publication in The Astronomical Journal (13 pages, 10 figures)
Nonlinear Optical Response Properties of Aryl - Substituted Boron -Dipyrromethene Dyes: Unidirectional Charge Transfer coupled with Structural Tuning
Creators: name: Misra, Ramprasad
Publisher: name: arXiv
Year: 2016
Subjects: subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: Controlling the nonlinear optical (NLO) response properties at the molecular level is a key to develop strong NLO active materials for technological applications. In this paper, we report quantum chemical investigation of NLO response properties of select aryl-substituted Boron-Dipyrromethene (BODIPY) dyes, a class of intramolecular charge transfer (ICT) probes. Density functional theory (DFT) with long-range corrected CAM-B3LYP functional and cc-pVTZ, 6-31G(d,p) and 6-31+G(d,p) basis sets are employed to compute the electronic structures and NLO response of the aforesaid molecules. Calculations at the second order Møller-Plesset perturbation (MP2) level of theory are performed for comparison. The results suggest that the charge transfer process in these molecules is mostly unidirectional and the total first hyperpolarizability (\b{eta}total) values of these molecules are dominantly dictated by the response in the direction of charge transfer. Alteration of conjugation strength through donor/acceptor substitution as well as twisting of the phenyl ring obtained through incorporation of methyl groups affect the NLO response of thesemolecules. The vector components of first hyperpolarizability (\b{eta}vec) of the probe molecules are also studied to analyze the angle between the vector components of \b{eta}vec and the dipole moment vector. The results presented here are expected to shed light on the origin of NLO response of several aryl-substituted BODIPY dyes and provide means to optimizing it for future technological applications.
description: 4 figures; Contains supporting Information
Visual and Spatial Understanding of Human-Object Interactions
Creators: name: Zhang, Frederic
Publisher: name: The Australian National University
Year: 2024

description: In the context of computer vision, human-object interactions (HOIs) are often characterised as a (subject, predicate, object) triplet, with humans being the subject. As such, to understand HOIs is to localise pairs of interactive instances and recognise the predicates that signify their interactions. This interpretation naturally leads to a graph structure, where humans and objects are represented as nodes while their interactions as edges. We investigate this idea by employing off-the-shelf object detectors to obtain a set of human and object detections, and building a bipartite graph with human nodes on one side of the bipartition and object nodes on the other. Unlike conventional methods, wherein nodes send scaled but otherwise identical messages to each of their neighbours, we propose to condition the message passing between pairs of nodes on their spatial relationships. With spatial conditioning, the proposed method is able to suppress numerous negative pairs due to incompatible spatial relationships, and particularly excels at inferring the correspondence between interactive humans and objects when there are many pairs in the same scene. In addition, we observe that the learned adjacency matrices spontaneously exhibit structures indicative of interactive pairs without explicit supervision. Such emergent properties prompt us to investigate further into the formulation of graphs. Apart from the unary representations (human and object instances), we incorporate human--object pairs into the graph structure by encoding each pair as a node. Utilising the popular transformer architecture, we propose the unary--pairwise transformer, wherein self-attention blocks serve as fully-connected graphs. We observe that when separate self-attention blocks are employed for the unary and pairwise representations, they specialise in complimentary ways. Specifically, the unary layer preferentially increases the scores of positive human--object pairs, while the pairwise layer decreases the scores of negative pairs. Despite the success in graphical modelling of HOIs, their complexity and ambiguity still poses a challenge. Through extensive visualisations, we observe that the commonly used object features are often extracted from object extremities, thus lacking the fine-grained contexts to disambiguate certain interactions. In particular, we identify two types of visual contexts lacking in current feature formulations and propose to enrich the representations with spatially-guided cross-attention, where a carefully designed box-pair positional embeddings serve as spatial biases. With rich visualisations, we demonstrate how the spatial guidance impacts the attention mechanism and supplements the model with key visual cues for the recognition of HOIs.
Additional file 11: Figure S6. of A comparative analysis of nonhost resistance across the two Triticeae crop species wheat and barley
Creators: name: Delventhal, Rhoda
name: Jeyaraman Rajaraman
name: Stefanato, Francesca
name: Rehman, Sajid
name: Aghnoum, Reza
name: McGrann, Graham
name: Bolger, Marie
name: BjĂśrn Usadel
name: Hedley, Pete
name: Boyd, Lesley
name: Niks, Rients
name: Schweizer, Patrick
name: Schaffrath, Ulrich
Publisher: name: figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Hematology
subject: Plant Biology
subject: 60506 Virology

description: Results of k-means clustering followed by hierarchical clustering on the nonhost-related DEGs of wheat and barley in each pathosystem. In an independent approach to identify co-regulated orthologues, a k-means clustering followed by a hierarchical clustering of individual k-means cluster members was carried out for both cereal species and respective interactions. For this, the normalized signal intensity values of host and nonhost DEGs (Fig.Â 2b) of the respective pathosystem were median-centered separately for wheat and barley in Genesis software (release 1.8.0, [88]). The median-centered signal values of both species were pooled for each pathosystem to form a single list, and a k-means clustering analysis was done in Genesis with default settings. Individual k-means clusters were then hierarchical clustered in Genesis with Pearson correlation, average linkage settings. To identify co-regulated regulons, sub-clusters with the occurrence of both wheat and barley probes (left clustering image; nodes with sub-clusters highlighted in color) were manually identified and extracted. A zoomed in image of these sub-clusters is shown on the right. Please note the occurrence of both wheat (A_99_) and barley (CUST_) probe IDs in the same node. In order to determine the gene function relation among these co-regulated wheat and barley DEGs, MapMan (3.5.1R2) and BlastN analyses (default parameters, BLASTN 2.2.29+) were carried out. (PDF 3400Â kb)
What determines the distribution of shallow convective mass flux through cloud base?
Creators: name: Sakradzija, Mirjana
name: Hohenegger, Cathy
Publisher: name: arXiv
Year: 2017
Subjects: subject: Atmospheric and Oceanic Physics (physics.ao-ph)
subject: FOS: Physical sciences

description: The distribution of cloud-base mass flux is studied using large-eddy simulations (LES) of two reference cases, one representing conditions over the tropical ocean, and another one representing mid-latitude conditions over land. To examine what sets the difference between the two distributions, nine additional LES cases are set up as variations of the two reference cases. We find that the total surface heat flux and its changes over the diurnal cycle do not influence the distribution shape. The latter is also not determined by the level of organization in the cloud field. It is instead determined by the ratio of the surface sensible heat flux to the latent heat flux, the Bowen ratio $B$. $B$ sets the thermodynamic efficiency of the moist convective heat cycle, which determines the portion of the total surface heat flux that can be transformed into mechanical work of convection against mechanical dissipation. The thermodynamic moist heat cycle sets the average mass flux per cloud $\langle m \rangle$, and through $\langle m \rangle$ it also controls the shape of the distribution. An expression for $\langle m \rangle$ is derived based on the moist convective heat cycle and is evaluated against LES. This expression can be used in shallow cumulus parameterizations as a physical constraint on the mass flux distribution. The similarity between the mass flux and the cloud area distributions indicate that $B$ also has a role in shaping the cloud area distribution, which could explain its different shapes and slopes observed in previous studies.
description: submitted to J. Atmos. Sci., revised
City Ecosystem Design
Creators: name: Soldati, Margherita
name: Chiappini, Letizia
name: Singh, Apurva
name: Coudard, Antoine
name: Chatel, Élodie
name: Miles, Vicky
Publisher: name: Zenodo
Year: 2022
Subjects: Logistics
Stakeholders
Governance
Material flows

description: This deliverable will illustrate the blueprint of economic loop models for each specific city resource stream: textiles, packaging, wood, plastics, water, agrifood, housing and electricity. The design is the result of the analysis and elaboration of information concerning logistics, system stakeholders, governance and business models.
Exact Diagonalization library for quantum electron models
Creators: name: Iskakov, Sergei
name: Danilov, Michael
Publisher: name: arXiv
Year: 2017
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We present an exact diagonalization C++ template library (EDLib) for solving quantum electron models, including single-band finite Hubbard cluster and multi-orbital impurity Anderson model. The observables that can be computed using EDLib are single particle Green's functions and spin-spin correlation functions. This code provides three different types of Hamiltonian matrix storage that can be chosen based on the model.
Multi-band Photometry of Trans-Neptunian Objects in the Subaru Hyper Suprime-Cam Survey
Creators: name: Terai, Tsuyoshi
name: Yoshida, Fumi
name: Ohtsuki, Keiji
name: Lykawka, Patryk Sofia
name: Takato, Naruhisa
name: Higuchi, Arika
name: Ito, Takashi
name: Komiyama, Yutaka
name: Miyazaki, Satoshi
name: Wang, Shiang-Yu
Publisher: name: arXiv
Year: 2017
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: We present a visible multi-band photometry of trans-Neptunian objects (TNOs) observed by the Subaru Telescope in the framework of Hyper Suprime-Cam Subaru Strategic Program (HSC-SSP) from March in 2014 to September in 2016. We measured the five broad-band (g, r, i, z, and Y) colors over the wavelength range from 0.4 um to 1.0 um for 30 known TNOs using the HSC-SSP survey data covering ~500 deg2 of sky within +/-30 deg of ecliptic latitude. This dataset allows us to characterize the dynamical classes based on visible reflectance spectra as well as to examine the relationship between colors and the other parameters such as orbital elements. Our results show that the hot classical and scattered populations share similar color distributions, while the cold classical population has a reflective decrease toward shorter wavelength below the i band. Based on the obtained color properties, we found that the TNO sample examined in the present work can be separated into two groups by inclination (I), the low-I population consisting of cold classical objects and high-I population consisting of hot classical and scattered objects. The whole sample exhibits an anti-correlation between colors and inclination, but no significant correlation between colors and semi-major axis, perihelion distance, eccentricity, or absolute magnitude. The color-inclination correlation does not seem to be continuous over the entire inclination range. Rather, it is seen only in the high-I population. We found that the low- and high-I populations are distinguishable in the g-i vs. eccentricity plot, but four high-I objects show g-i colors similar to those of the low-I population. If we exclude these four objects, the high-I objects show a positive correlation between g-i and eccentricity and a negative correlation between g-i and inclination with high significance levels.
description: 29 pages, 11 figure, 5 tables, submitted to HSC special issue in PASJ
Symbolic computation with monotone operators
Creators: name: Lauster, Florian
name: Luke, D. Russell
name: Tam, Matthew K.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Optimization and Control (math.OC)
subject: FOS: Mathematics
subject: 47H05, 47N10, 68W30

description: We consider a class of monotone operators which are appropriate for symbolic representation and manipulation within a computer algebra system. Various structural properties of the class (e.g., closure under taking inverses, resolvents) are investigated as well as the role played by maximal monotonicity within the class. In particular, we show that there is a natural correspondence between our class of monotone operators and the subdifferentials of convex functions belonging to a class of convex functions deemed suitable for symbolic computation of Fenchel conjugates which were previously studied by Bauschke & von Mohrenschildt and by Borwein & Hamilton. A number of illustrative examples utilizing the introduced class of operators are provided including computation of proximity operators, recovery of a convex penalty function associated with the hard thresholding operator, and computation of superexpectations, superdistributions and superquantiles with specialization to risk measures.
description: 17 pages, 2 figures
ДЕНДРИТНЫЕ КЛЕТКИ КОЖИ
Creators: name: ГРИЩЕНКО Е.А.
Publisher: name: Аллергология и Иммунология в Педиатрии
Year: 2016

description: The two main populations of dendritic cells (DCs) present in normal human skin are epidermal Langerhans’ cells (LCs) and dermal DCs. DCs are without a doubt important key skin cells that connect information from the environment with the innate and adaptive immune system. Their function is decisive for the initiation and inhibition of immune responses, and therefore they play a central role for both the healthy and diseased states of the skin. The significant contribution of skin DCs to pathogenesis of the atopic dermatitis (AD), allergic, irritant contact dermatitis, psoriasis makes these cells important therapeutic targets.
Additional file 10: Figure S5. of A comparative analysis of nonhost resistance across the two Triticeae crop species wheat and barley
Creators: name: Delventhal, Rhoda
name: Jeyaraman Rajaraman
name: Stefanato, Francesca
name: Rehman, Sajid
name: Aghnoum, Reza
name: McGrann, Graham
name: Bolger, Marie
name: BjĂśrn Usadel
name: Hedley, Pete
name: Boyd, Lesley
name: Niks, Rients
name: Schweizer, Patrick
name: Schaffrath, Ulrich
Publisher: name: figshare
Year: 2017
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Plant Biology
subject: 60506 Virology

description: Numbers of genes found to be differentially regulated between host and nonhost interactions at different time points in wheat or barley after inoculation with adapted and non-adapted isolates of Blumeria, Magnaporthe and Puccinia (according to statistical analysis of microarray data). (PDF 51Â kb)
From Pragmatic to Systematic Software Process Improvement: An Evaluated Approach
Creators: name: Kuhrmann, Marco
name: Fernández, Daniel Méndez
Publisher: name: arXiv
Year: 2017
Subjects: subject: Software Engineering (cs.SE)
subject: FOS: Computer and information sciences

description: Software processes improvement (SPI) is a challenging task, as many different stakeholders, project settings, and contexts and goals need to be considered. SPI projects are often operated in a complex and volatile environment and, thus, require a sound management that is resource-intensive requiring many stakeholders to contribute to the process assessment, analysis, design, realisation, and deployment. Although there exist many valuable SPI approaches, none address the needs of both process engineers and project managers. This article presents an Artefact-based Software Process Improvement & Management approach (ArSPI) that closes this gap. ArSPI was developed and tested across several SPI projects in large organisations in Germany and Eastern Europe. The approach further encompasses a template for initiating, performing, and managing SPI projects by defining a set of 5 key artefacts and 24 support artefacts. We present ArSPI and discus results of its validation indicating ArSPI to be a helpful instrument to set up and steer SPI projects.
description: IET Software, 2015
МЕДИЦИНСКАЯ РЕАБИЛИТАЦИЯ ДЕТЕЙ С БРОНХИАЛЬНОЙ АСТМОЙ
Creators: name: ЛЯН Н.А.
name: ХАН М.А.
Publisher: name: Аллергология и Иммунология в Педиатрии
Year: 2016
Subjects: РЕАБИЛИТАЦИЯ
ДЕТИ
БРОНХИАЛЬНАЯ АСТМА

description: Anti-asthma medication alone cannot be considered a complete treatment for asthma. Drugs have not made an impact on asthma mortality, yet may cause significant side-effects. Physical factors match up well with basic therapy, particularly that they enable to reduce the size and duration of medical drugs application.
СОВРЕМЕННЫЕ ТЕХНОЛОГИИ ОЦЕНКИ КЛИМАТА И ПОГОДЫ ДЛЯ ОПТИМИЗАЦИИ МЕТОДОВ КЛИМАТОТЕРАПИИ В КОМПЛЕКСНОМ САНАТОРНО-КУРОРТНОМ ЛЕЧЕНИИ ДЕТЕЙ С БРОНХИАЛЬНОЙ АСТМОЙ
Creators: name: УЯНАЕВА А.И.
name: ТУПИЦЫНА Ю.Ю.
name: ЧУКИНА И.М.
name: МАКСИМОВА Г.А.
Publisher: name: Аллергология и Иммунология в Педиатрии
Year: 2016

description: Among the natural healing factors important place belongs to bio-climatic resources, which are present at each resort, regardless of their profile. Turning climatotherapy methods in medical and rehabilitation programs have a positive impact on the psycho-emotional state, contribute to the back-up capacity and nonspecific resistance. One of the basic conditions for the effective application of climatic factors in the prevention, treatment and rehabilitation is the knowledge of the physiological mechanisms of their action on the body, as the impact of climate and weather cause responses. For rational and scientifically sound assessment of the use of climate-needed weather conditions derived from meteopoint or modern medical and meteorological systems that monitor weather conditions in real time. Perform automated medical-meteorological monitoring micro-climatic conditions of the territory of a sanatorium complex "Vulan" (Gelendzhik) allowed us to determine bioclimatic potential and the most comfortable weather conditions aerotherapy (air bath) and heliotherapy (sun baths) in the seasonal aspect. Complex use klimatotherapeutic factors in the sanatorium treatment of children with asthma, significantly reduced the number of exacerbations caused by the weather and promote positive changes in the structure of the manifestations meteosensitivity.
ИНТЕРЛЕЙКИН-1 В ЖЕЛУДОЧНОЙ СЛИЗИ У ДЕТЕЙ С ФУНКЦИОНАЛЬНОЙ ДИСПЕПСИЕЙ КАК ПРЕДИКТОР ФОРМИРОВАНИЯ ХРОНИЧЕСКОГО ВОСПАЛЕНИЯ СЛИЗИСТОЙ ОБОЛОЧКИ ЖЕЛУДОЧНО-КИШЕЧНОГО ТРАКТА
Creators: name: ПЕЧКУРОВ Д.В.
name: МИГАЧЕВА Н.Б.
name: АЛЛЕНОВА Ю.Е.
Publisher: name: Аллергология и Иммунология в Педиатрии
Year: 2016

description: Inflammatory potential of the gastrointestinal mucosa is of considerable interest from the point of view of chronic inflammation development in children with functional digestive disorders. Interleukin-1 is a key proinflammatory cytokine. Its level in tissue increases in acute inflammation, and the retention of its active production may be one of the causes and predictors of a chronic inflammation process. In the current study we determined the level of 1L-1 in the gastric mucus in children with different variants of functional dyspepsia (H. pylori-negative and H. pylori positive), as well as in children with identified by esoph-agogastroduodenoscopy erosions or ulcers of the upper gastrointestinal tract. The data indicate significant differences in the levels of 1L-1 in children with different variants of gastrointestinal pathology and dispute the idea that functional dyspepsia can be considered as the initial stage of organic pathology of gastrointestinal tract.
Donor-Transmitted Cancer in Orthotopic Solid Organ Transplant Recipients: A Systematic Review.
Creators: name: Greenhall, George H B
name: Ibrahim, Maria
name: Dutta, Utkarsh
name: Doree, Carolyn
name: Brunskill, Susan J
name: Johnson, Rachel J
name: Tomlinson, Laurie A
name: Callaghan, Chris J
name: Watson, Christopher J E
Publisher: name: Apollo - University of Cambridge Repository
Year: 2021
Subjects: Cancer
Heart transplantation
Liver transplantation
Lung transplantation
Deceased Organ Donors
Donor-transmitted Disease
Humans
Neoplasm Recurrence, Local
Organ Transplantation
Transplants
Tissue Donors
Transplant Recipients

description: Donor-transmitted cancer (DTC) has major implications for the affected patient as well as other recipients of organs from the same donor. Unlike heterotopic transplant recipients, there may be limited treatment options for orthotopic transplant recipients with DTC. We systematically reviewed the evidence on DTC in orthotopic solid organ transplant recipients (SOTRs). We searched MEDLINE, EMBASE, PubMed, Scopus, and Web of Science in January 2020. We included cases where the outcome was reported and excluded donor-derived cancers. We assessed study quality using published checklists. Our domains of interest were presentation, time to diagnosis, cancer extent, management, and survival. There were 73 DTC cases in liver (n = 51), heart (n = 10), lung (n = 10) and multi-organ (n = 2) recipients from 58 publications. Study quality was variable. Median time to diagnosis was 8 months; 42% were widespread at diagnosis. Of 13 cases that underwent re-transplantation, three tumours recurred. Mortality was 75%; median survival 7 months. Survival was worst in transmitted melanoma and central nervous system tumours. The prognosis of DTC in orthotopic SOTRs is poor. Although re-transplantation offers the best chance of cure, some tumours still recur. Publication bias and clinical heterogeneity limit the available evidence. From our findings, we suggest refinements to clinical practice. Systematic Review Registration: https://www.crd.york.ac.uk/prospero/display_record.php?ID=CRD42020165001, Prospero Registration Number: CRD42020165001.
The Imprecisions of Precision Measures in Process Mining
Creators: name: Tax, Niek
name: Lu, Xixi
name: Sidorova, Natalia
name: Fahland, Dirk
name: van der Aalst, Wil M. P.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Databases (cs.DB)
subject: Artificial Intelligence (cs.AI)
subject: Logic in Computer Science (cs.LO)
subject: Software Engineering (cs.SE)
subject: FOS: Computer and information sciences

description: In process mining, precision measures are used to quantify how much a process model overapproximates the behavior seen in an event log. Although several measures have been proposed throughout the years, no research has been done to validate whether these measures achieve the intended aim of quantifying over-approximation in a consistent way for all models and logs. This paper fills this gap by postulating a number of axioms for quantifying precision consistently for any log and any model. Further, we show through counter-examples that none of the existing measures consistently quantifies precision.
title: ADCO, Grènetier de Cîteaux : comptes (1497-1504) (11 H 1172), f. 00518
Creators: name: de la Côte-d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CBMA/CG21/F.PETOT/2019
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: comptes
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge

description: Grènetier de Cîteaux : comptes (1497-1504), Archives départementales de la Côte-d'Or, (11 H 1172). Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Grènetier de Cîteaux : comptes (1497-1504), Archives départementales de la Côte-d'Or, (11 H 1172), f. 00518, in Projet CBMA - Corpus Burgundiae Medii Aevi \[Ressource en ligne\], https:// manuscrits.cbma-project.eu/
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
Effect of nuclear saturation parameters on possible maximum mass of neutron stars
Creators: name: Sotani, Hajime
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: In order to systematically examine the possible maximum mass of neutron stars, which is one of the important properties characterizing the physics in high-density region, I construct neutron star models by adopting phenomenological equations of state with various values of nuclear saturation parameters for low-density region, which are connected to the equation of state for high-density region characterized by the possible maximum sound velocity in medium. I derive an empirical formula for the possible maximum mass of neutron star. If massive neutron stars are observed, it could be possible to get a constraint on the possible maximum sound velocity for high-density region.
description: accepted for publication in PRC
Additional file 5: Table S5. of Robotic assisted gait as a tool for rehabilitation of individuals with spinal cord injury: a systematic review
Creators: name: Ledycnarf Holanda
name: PatrĂ­Cia Silva
name: Thiago Amorim
name: Matheus Lacerda
name: SimĂŁo, Camila
name: Morya, Edgard
Publisher: name: figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Neuroscience
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Computational Biology

description: Studies that presented sensory and motors parameters as outcome measures in individuals with SCI. (PDF 273Â kb)
Baryon number fluctuations in chiral effective models and their phenomenological implications
Creators: name: Almasi, Gabor
name: Friman, Bengt
name: Redlich, Krzysztof
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We study the critical properties of net-baryon-number fluctuations at the chiral restoration transition in a medium at finite temperature and net baryon density. The chiral dynamics of quantum chromodynamics (QCD) is modeled by the Polykov-loop extended Quark-Meson Lagrangian, that includes the coupling of quarks to vector meson and temporal gauge fields. The Functional Renormalization Group is employed to properly account for the $O(4)$ criticality at the phase boundary. We focus on the properties and systematics of ratios of the net-baryon-number cumulants $χ_B^n$, for ${1\leq n\leq 6}$, near the phase boundary. The results are presented in the context of the recent experimental data of the STAR Collaboration on fluctuations of the net proton number in heavy ion collisions at RHIC. We show that the model results for the energy dependence of the cumulant ratios are in good overall agreement with the data, with one exception. At center-of-mass energies below ${19.6\;\mathrm{GeV}}$, we find that the measured fourth-order cumulant deviates considerably from the model results, which incorporate the expected $O(4)$ and $Z(2)$ criticality. We assess the influence of model assumptions and in particular of repulsive vector-interactions, which are used to modify the location of the critical endpoint in the model, on the cumulants ratios. Finally, we discuss a possibility to test to what extent the fluctuations are affected by nonequilibrium dynamics by comparing certain ratios of cumulants.
description: 15 pages, 13 figures
Roland
Creators: name: Quinault, Philippe
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2021
Subjects: Paris
Livret d'Opéra
Tragédie en musique
Académie royale de musique
Première génération d'opéras français

description: Tragédie représentée par l'Académie royale de musique en 1685. Les paroles sont de Philippe Quinault et la musique de Jean-Baptiste Lully. Le livret est consultable de manière publique par un portail qui donne accès simultanément au fac-similé, à une version du corpus qui respecte la graphie d’origine et une version du corpus normalisé exploitable à travers toutes les fonctionnalités de la plateforme TXM : http://fanum-txm.univ-fcomte.fr/txm/?command=edition&path=/LIVRETSOPERA&editions=facs,originale,normalis%C3%A9e&textid=12_ROLAND
description: Bibliographic citation: Cote (ELLIADD) : 12_ROLAND
description: URL TXM : http://fanum-txm.univ-fcomte.fr/txm/?command=edition&path=/LIVRETSOPERA&editions=facs,originale,normalis%C3%A9e&textid=12_ROLAND
Additional file 4: Table S3. of Transcriptomic and metabolic responses of Calotropis procera to salt and drought stress
Creators: name: Mutwakil, Mohammed
name: Hajrah, Nahid
name: Atef, Ahmed
name: Edris, Sherif
name: Mernan Sabir
name: Areej Al-Ghamdi
name: Meshaal Sabir
name: Nelson, Charlotte
name: Makki, Rania
name: Ali, Hani
name: Fotouh El-Domyati
name: Abdulrahman Al-Hajar
name: Gloaguen, Yoann
name: Al-Zahrani, Hassan
name: Sabir, Jamal
name: Jansen, Robert
name: Bahieldin, Ahmed
name: Hall, Neil
Publisher: name: figshare
Year: 2017
Subjects: subject: Physiology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Computational Biology

description: Enriched Biological GO terms in different treatments and time points. Table S4 Enriched Molecular Function GO terms in different treatments and time points. (DOCX 130 kb)
GlnK facilitates the dynamic regulation of bacterial nitrogen assimilation
Creators: name: Gosztolai, Adam
name: Schumacher, Jörg
name: Behrends, Volker
name: Bundy, Jacob G
name: Heydenreich, Franziska
name: Bennett, Mark H
name: Buck, Martin
name: Barahona, Mauricio
Publisher: name: arXiv
Year: 2017
Subjects: subject: Subcellular Processes (q-bio.SC)
subject: Quantitative Methods (q-bio.QM)
subject: FOS: Biological sciences

description: Ammonium assimilation in E. coli is regulated by two paralogous proteins (GlnB and GlnK), which orchestrate interactions with regulators of gene expression, transport proteins and metabolic pathways. Yet how they conjointly modulate the activity of glutamine synthetase (GS), the key enzyme for nitrogen assimilation, is poorly understood. We combine experiments and theory to study the dynamic roles of GlnB and GlnK during nitrogen starvation and upshift. We measure time-resolved in vivo concentrations of metabolites, total and post-translationally modified proteins, and develop a concise biochemical model of GlnB and GlnK that incorporates competition for active and allosteric sites, as well as functional sequestration of GlnK. The model predicts the responses of GS, GlnB and GlnK under time-varying external ammonium level in the wild type and two genetic knock-outs. Our results show that GlnK is tightly regulated under nitrogen-rich conditions, yet it is expressed during ammonium run-out and starvation. This suggests a role for GlnK as a buffer of nitrogen shock after starvation, and provides a further functional link between nitrogen and carbon metabolisms.
ДЕНДРИТНЫЕ КЛЕТКИ КИШЕЧНИКА
Creators: name: ГРИЩЕНКО Е.А.
Publisher: name: Аллергология и Иммунология в Педиатрии
Year: 2016

description: Dendritic cells (DCs) within the intestinal compartments have been extensively studied and much is now known regarding their phenotype. DCs are essential modulators of the immune system as they maintain the balance between immunogenic and tolerogenic immune responses in the intestine. Gut-associated DCs play a key role in the in duction of Treg cells and maintaining immunological tolerance. Dysregulation of DCs function can result in severe intestinal inflammation. Given the pivotal role of DCs in regulating the balance between immunity and tolerance, much effort has been put into the generation of tolerogenic DCs in recent years. The efficacy of treatments for food allergy, such as oral allergen immunotherapy (OIT) or sublingual allergen immunotherapy (SLIT), might be enhanced by the use of adjuvants designed to enhance the tolerogenic properties of DCs.
Shallow Defects and Long Charge-Carrier Lifetimes in Lead-halide Perovskites
Creators: name: Kirchartz, Thomas
name: Krückemeier, Lisa
name: Yan, Genghua
name: Yuan, Ye
name: Rau, Uwe
Publisher: name: Forschungzentrum Jülich
Year: 2023

description: MATSUS, Valencia, Spain, 6 Mar 2023 - 10 Mar 2023
Systemdienstleistungserbringung durch intelligente Gebäude
Creators: name: Kochanneck, Sebastian
Publisher: name: KIT Scientific Publishing
Year: 2019
Subjects: Elektroenergienetze
Energiemanagement
Systemdienstleistungen
Hardware-in-the-Loop
power grids
energy management
system services
hardware-in-the-loop

description: Die vorliegende Arbeit analysiert die Auswirkungen intelligenter Gebäude auf Niederspannungsnetze und nutzt diese um im Kontext einer technisch, topologisch und koordinativ ausgestalteten Netzampel ein Portfolio an Systemdienstleistungen mittels eines regionalen Energiemanagementsystems zu erbringen. Dieses wird mittels Referenzszenarien sowie unter Verwendung eines Software-in-a-Hardware-Loop-Aufbaus und Co-Simulation evaluiert und die Netzdienlichkeit intelligenter Gebäude demonstriert.
On the Use of Variability Operations in the V-Modell XT Software Process Line
Creators: name: Kuhrmann, Marco
name: Fernández, Daniel Méndez
name: Ternité, Thomas
Publisher: name: arXiv
Year: 2017
Subjects: subject: Software Engineering (cs.SE)
subject: FOS: Computer and information sciences

description: Software process lines provide a systematic approach to develop and manage software processes. It defines a reference process containing general process assets, whereas a well-defined customization approach allows process engineers to create new process variants, e.g., by extending or modifying process assets. Variability operations are an instrument to realize flexibility by explicitly declaring required modifications, which are applied to create a procedurally generated company-specific process. However, little is known about which variability operations are suitable in practice. In this article, we present a study on the feasibility of variability operations to support the development of software process lines in the context of the V-Modell XT. We analyze which variability operations are defined and practically used. We provide an initial catalog of variability operations as an improvement proposal for other process models. Our findings show that 69 variability operation types are defined across several metamodel versions of which, however, 25 remain unused. The found variability operations allow for systematically modifying the content of process model elements and the process documentation, and they allow for altering the structure of a process model and its description. Furthermore, we also find that variability operations can help process engineers to compensate process metamodel evolution.
description: Journal of Software: Evolution and Process, 2015
Additional file 2: Text S2. of Total evidence phylogeny and evolutionary timescale for Australian faunivorous marsupials (Dasyuromorphia)
Creators: name: Shimona Kealy
name: Beck, Robin
Publisher: name: figshare
Year: 2017
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: List of morphological characters and specimens examined to score these. (DOCX 35 kb)
Additional file 1 of Factors associated with post-operative delirium in hip fracture patients: what should we care
Creators: name: Kong, Dequn
name: Luo, Weihua
name: Zhu, Zhijun
name: Sun, Sixin
name: Zhu, Jian
Publisher: name: figshare
Year: 2022
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Biotechnology
subject: Ecology
subject: Mental Health
subject: Hematology

description: Additional file 1: Table S1. The variable assignment of multivariate logistic regression.
Measurement-induced operation of two-ion quantum heat machines
Creators: name: Chand, Suman
name: Biswas, Asoka
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We show how one can implement a quantum heat machine by using two interacting trapped ions, in presence of a thermal bath. The electronic states of the ions act like a working substance, while the vibrational mode is modelled as the cold bath. The heat exchange with the cold bath is mimicked by the projective measurement of the electronic states. We show how such measurement in a suitable basis can lead to either a quantum heat engine or a refrigerator, that undergoes a quantum Otto cycle. The local magnetic field is adiabatically changed during the heat cycle. The performance of the heat machine depends upon the interaction strength between the ions, the magnetic fields, and the measurement cost. In our model, the coupling to the hot and the cold baths are never switched off in an alternative fashion during the heat cycle, unlike other existing proposals of quantum heat engines. This makes our proposal experimentally realizable using current tapped-ion technology.
description: 15
Magnetic resonance study of bulk and thin film EuTiO3
Creators: name: Laguta, V. V.
name: Kamba, S.
name: Maryško, M.
name: Andrzejewski, B.
name: Kachlík, M.
name: Maca, K.
name: Lee, J. H.
name: Schlom, D. G.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Magnetic resonance spectra of EuTiO3 in both bulk and thin film form were taken at temperatures from 3-350 K and microwave frequencies from 9.2-9.8 and 34 GHz. In the paramagnetic phase, magnetic resonance spectra are determined by magnetic dipole and exchange interactions between Eu2+ spins. In the film, a large contribution arises from the demagnetization field. From detailed analysis of the linewidth and its temperature dependence, the parameters of spin-spin interactions were determined: the exchange frequency is 15-15.5 GHz and the estimated critical exponent of the spin correlation length is ~ 0.5. In the bulk samples, the spectra exhibited a distinct minimum in the linewidth at the Néel temperature, T_N = 5.5 K, while the resonance field practically does not change even on cooling below T_N. This is indicative of a small magnetic anisotropy ~ 320 G in the antiferromagnetic phase. In the film, the magnetic resonance spectrum is split below T_N into several components due to excitation of the magnetostatic modes, corresponding to a non-uniform precession of magnetization. Moreover, the film was observed to degrade over two years. This was manifested by an increase of defects and a change in the domain structure. The saturated magnetization in the film, estimated from the magnetic resonance spectrum, was about 900 emu/cm3 or 5.5 mu_B/unit cell at T = 3.5 K.
The Lyman Continuum Escape and ISM properties in Tololo 1247-232 - New Insights from HST and VLA
Creators: name: Puschnig, Johannes
name: Hayes, Matthew
name: Östlin, Göran
name: Rivera-Thorsen, Thøger E.
name: Melinder, Jens
name: Cannon, John M.
name: Menacho, Veronica
name: Zackrisson, Erik
name: Bergvall, Nils
name: Leitet, Elisabet
Publisher: name: arXiv
Year: 2017
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: Low- and intermediate mass galaxies are widely discussed as cause of reionization at redshift $z\sim10-6$. However, observational proof of galaxies that are leaking ionizing radiation (Lyman continuum; LyC) is a currently ongoing challenge and the list of LyC emitting candidates is still short. Tololo 1247-232 is among those very few galaxies with recently reported leakage. We performed intermediate resolution ultraviolet (UV) spectroscopy with the Cosmic Origins Spectrograph (COS) onboard the Hubble Space Telescope and confirm ionizing radiation emerging from Tololo 1247-232. Adopting an improved data reduction procedure, we find that LyC escapes from the central stellar clusters, with an escape fraction of 1.5$\pm$0.5% only, i.e. the lowest value reported for the galaxy so far. We further make use of FUV absorption lines of Si II and Si IV as a probe of the neutral and ionized interstellar medium. We find that most of the ISM gas is ionized, likely facilitating LyC escape from density bounded regions. Neutral gas covering as a function of line-of-sight velocity is derived using the apparent optical depth method. The ISM is found to be sufficiently clumpy, supporting the direct escape of LyC photons. We further report on broadband UV and optical continuum imaging as well as narrowband imaging of Ly$α$, H$α$ and H$β$. Using stellar population synthesis, a Ly$α$ escape fraction of 8% was derived. We also performed VLA 21cm imaging. The hydrogen hyperfine transition was not detected, but a deep upper limit atomic gas mass of $\lesssim10^9 M_{\odot}$ could be derived. The upper limit gas fraction defined as $\frac{M_{H I}}{M_*}$ is only 20%. Evidence is found that the H I gas halo is relatively small compared to other Lyman Alpha emitters.
Additional file 21 of Novel high-resolution targeted sequencing of the cervicovaginal microbiome
Creators: name: Andralojc, Karolina M.
name: Molina, Mariano A.
name: Qiu, Mengjie
name: Spruijtenburg, Bram
name: Rasing, Menno
name: Pater, Bernard
name: Huynen, Martijn A.
name: Dutilh, Bas E.
name: Ederveen, Thomas H. A.
name: Elmelik, Duaa
name: Siebers, Albert G.
name: Loopik, Diede
name: Bekkers, Ruud L. M.
name: Leenders, William P. J.
name: Melchers, Willem J. G.
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 21 Supplementary Figure 5. Average analysis of hrHPV cohort. Average analysis of hrHPV negative versus hrHPV positive with CIN2+ demonstrates a strong association of absence and presence of particular microbes. L. acidophilus, L. jensenii and L. crispatus were highly present in hrHPV negative women, but the microbiome seemingly changes to a diverse-anaerobic microbiota in hrHPV positive women with CIN2+.