cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
DETERMINANTS OF YIELD GAP IN RAINFED AND IRRIGATED RICE PRODUCTION SYSTEMS – EVIDENCE FROM HOUSEHOLD SURVEY IN KWARA STATE, NIGERIA
Uwarunkowania poziomu plonów ryżu w uprawach nawadnianych naturalnie i sztucznie – na podstawie badań przeprowadzonych w Stanie Kwara w Nigerii
Creators: name: Raphael Olanrewaju Babatunde,
name: Mercy Funke Salami,
name: Muhammed, Baba Abdullahi
name: Raphael Olanrewaju Babatunde,
name: Mercy Funke Salami,
name: Muhammed, Baba Abdullahi
Publisher: name: Unknown
Year: 2017
Subjects: subject: Agricultural and Food Policy
subject: Community/Rural/Urban Development
subject: Crop Production/Industries
subject: Demand and Price Analysis
subject: yield gap,
subject: irrigation,
subject: production systems,
subject: rice

description: The actual yield of rice in Nigeria has not been able to reach its potential. Consequently, the cost of rice importation is alarming. However, rice yield varies under various production systems. Therefore, this study examines the determinants of yield gap in rainfed and irrigated rice production systems in Kwara state, Nigeria. Gross Margin Budgetary analysis, Stochastic Frontier, and Linear Regression Model were respectively used to estimate the profitability, technical efficiency, and determinants of yield gap in both production systems. The result shows that rice production is more profitable and efficient under the irrigated rice production system than the rainfed rice production system. It was also discovered that the significant determinants of yield gap in both production systems vary. However, the size of farm cultivated and the rice variety planted are common significant determinants of yield gap in both systems. This research therefore recommends that irrigation facilities and improved rice variety should be made available to farmers. Additionally, policy makers should formulate policies that would enable rice farmers to have access to larger farm lands.
description: DOI: 10.17306/J.JARD.2017.00286
Vijana Vijiweni II : A cluster-randomized trial to evaluate the efficacy of a microfinance and peer health leadership intervention for HIV and intima
Creators: name: Kajula, Lusajo
name: Balvanz, Peter
name: Kilonzo, Mrema Noel
name: Mwikoko, Gema
name: Yamanis, Thespina
name: Mulawa, Marta I.
name: Kajuna, Deus
name: Hill, Lauren
name: Conserve, Donaldson F.
name: McNaughton Reyes, Heathe Luz
name: Leatherman, Sheila
name: Singh, Basant
name: Maman, Suzanne
Publisher: name: American University
Year: 2023

description: Article published in: BMC Public Health (2016) 16:113.
Additional file 1 of In silico analysis of phylogeny, structure, and function of arsenite oxidase from unculturable microbiome of arsenic contaminated soil
Creators: name: Siddhartha Pal
name: Sengupta, Kriti
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 1. List of accession numbers of proteins and cDNA sequences for all selected 78 arsenite oxidase that was retrieved from NCBI for computational analysis in present study.
Thermal Tachyon Cosmology
Creators: name: Piao, Yun-Song
name: Zhang, Yuan-Zhong
Publisher: name: arXiv
Year: 2003
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We show that in a multi DD branes system with high temperature, there may exist a thermal cosmological phase before usual tachyon inflation. Though this thermal phase can be very transitory, it may has some interesting applications for early tachyon/brane cosmology.
description: 5 pages, no figures. new version with 6 pages, part paragraphs were rewritten and title was slightly changed, to publish in PLB
Strichartz Estimates for Schr{ö}dinger equation with singular and time dependent Potential and Application to NLS
Creators: name: Haque, Saikatul
Publisher: name: arXiv
Year: 2020
Subjects: subject: Analysis of PDEs (math.AP)
subject: FOS: Mathematics
subject: 35Q41, 35Q55, 35P25, 47J35, 35Q40

description: We establish inhomogeneous Strichartz Estimates for the Schr{ö}dinger equation with singular and time dependent potentials for non-admissible pairs. Our work extends the results provided by Vilela [23] and Foschi [6] where they proved the results in the absence of potential. It also extends the works of Pierfelice [20] and Burq, Planchon, Stalker, Tahvildar-Zadeh [3], who proved the estimates for admissible pairs. We also extend the recent work of Mizutani, Zhang, Zheng [17] and as an application of it, we improve the stability result of Kenig-Merle [13], which in turn establishes a proof (alternative to [26]) of existence of scattering solution for the energy critical focusing NLS with inverse square potential.
description: 20 pages, 1 figure
High energy neutrino production in gamma-ray bursts: dependence of the neutrino signal on the jet composition
Creators: name: De Lia, Valentin
name: Tamborra, Irene
Publisher: name: arXiv
Year: 2024
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Heavy nuclei can be synthetized or entrained in gamma-ray bursts (GRBs) with implications on the high-energy neutrino emission. By means of a Monte-Carlo algorithm, we model nuclear cascades and investigate their impact on the neutrino production considering kinetic dominated jets (in the internal shock model, including a dissipative photosphere) as well as Poynting flux dominated jets (for a jet model invoking internal-collision-induced magnetic reconnection and turbulence, ICMART). We find that the ICMART model allows for efficient nuclear cascades leading to an overall larger neutrino fluence than in the other two jet models. The survival of nuclei and inefficient nuclear cascades lead to an overall reduction of the neutrino fluence up to one order of magnitude. However, if nuclei are disintegrated, the neutrino fluence may be comparable to the one emitted from a jet loaded with protons. Exploring the parameter space of jet properties, we conclude that the composition and the bulk Lorentz factor have significant impact on the efficiency of nuclear cascades as well as the spectral shape of the expected neutrino fluence. On the other hand, the neutrino spectral distribution is less sensitive to the power-law index of the accelerated population of protons or heavier nuclei. For what concerns the diffuse emission of neutrinos from GRBs, we find that the uncertainty due to the jet composition can be at most comparable to the one related to the GRB cosmological rate.
description: 38 pages, including 15 figures and 3 appendices. Discussion expanded; results unchanged. Matches version accepted for publication in JCAP
On generalized residue network for deep learning of unknown dynamical systems
Creators: name: Chen, Zhen
name: Xiu, Dongbin
Publisher: name: arXiv
Year: 2020
Subjects: subject: Machine Learning (cs.LG)
subject: Numerical Analysis (math.NA)
subject: Dynamical Systems (math.DS)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences
subject: FOS: Mathematics

description: We present a general numerical approach for learning unknown dynamical systems using deep neural networks (DNNs). Our method is built upon recent studies that identified the residue network (ResNet) as an effective neural network structure. In this paper, we present a generalized ResNet framework and broadly define residue as the discrepancy between observation data and prediction made by another model, which can be an existing coarse model or reduced-order model. In this case, the generalized ResNet serves as a model correction to the existing model and recovers the unresolved dynamics. When an existing coarse model is not available, we present numerical strategies for fast creation of coarse models, to be used in conjunction with the generalized ResNet. These coarse models are constructed using the same data set and thus do not require additional resources. The generalized ResNet is capable of learning the underlying unknown equations and producing predictions with accuracy higher than the standard ResNet structure. This is demonstrated via several numerical examples, including long-term prediction of a chaotic system.
CREDIT ACTIVITIES OF COOPERATIVE BANKS IN POLAND
Działalność kredytowa banków spółdzielczych w Polsce
Creators: name: Anna Bieniasz,
name: Paweł Krysztofiak
name: Anna Bieniasz,
name: Paweł Krysztofiak
Publisher: name: Unknown
Year: 2017
Subjects: subject: Agribusiness
subject: Agricultural Finance
subject: Financial Economics
subject: Political Economy
subject: Risk and Uncertainty
subject: cooperative banks,
subject: credit,
subject: non-performing loans

description: The aim of the study was to analyze the lending activities of cooperative banks in Poland in the years 2010– 2014, in a size of banks. Elaboration is a review, based on the data of the Polish Financial Supervision Authority. Research indicates that the value of own funds of the cooperative banks was reflected in both the volume of lending, and in the structure of loans. Banks with capital of 5 million euro loans for primarily farmers, individuals, and individual entrepreneurs. In turn, the banks with capital of more than 5 million euro were most involved in the financing of small and medium enterprises and individual farmers. Regardless of the size of banks, the most important in lending loans were investment and operating
description: DOI: 10.17306/J.JARD.2017.00282
Vijana Vijiweni II : A cluster-randomized trial to evaluate the efficacy of a microfinance and peer health leadership intervention for HIV and intima
Creators: name: Kajula, Lusajo
name: Balvanz, Peter
name: Kilonzo, Mrema Noel
name: Mwikoko, Gema
name: Yamanis, Thespina
name: Mulawa, Marta I.
name: Kajuna, Deus
name: Hill, Lauren
name: Conserve, Donaldson F.
name: McNaughton Reyes, Heathe Luz
name: Leatherman, Sheila
name: Singh, Basant
name: Maman, Suzanne
Publisher: name: BioMed Central Ltd.
Year: 2023
Subjects: classificationCode: 4206
subject: Public health

description: Article published in: BMC Public Health (2016) 16:113.
Additional file 3 of In silico analysis of phylogeny, structure, and function of arsenite oxidase from unculturable microbiome of arsenic contaminated soil
Creators: name: Siddhartha Pal
name: Sengupta, Kriti
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 3. Cofactors predicted by Cofactory 1.0 for query proteins.
Additional file 4 of Barriers and facilitators to implementation of menu labelling interventions from a food service industry perspective: a mixed methods systematic review
Creators: name: Kerins, Claire
name: McHugh, Sheena
name: McSharry, Jenny
name: Reardon, Caitlin M.
name: Hayes, Catherine
name: Perry, Ivan J.
name: Geaney, Fiona
name: Seery, Suzanne
name: Kelly, Colette
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: Additional file 4. Final codebook and coding assumptions. This file provides the final codebook and coding assumptions used in this review.
Additional file 4 of In silico analysis of phylogeny, structure, and function of arsenite oxidase from unculturable microbiome of arsenic contaminated soil
Creators: name: Siddhartha Pal
name: Sengupta, Kriti
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 4. Homology modelling of representative enzyme obtained from SWISS MODEL.
THE AWARENESS OF THE EU FOOD LABELLING SYSTEM AMONG UNIVERSITY STUDENTS
Znajomość wspólnotowych oznaczeń dla żywności wśród studentów
Creators: name: Izabela Cichocka,
name: Oleniuch, Iwona
name: Izabela Cichocka,
name: Oleniuch, Iwona
Publisher: name: Unknown
Year: 2017
Subjects: subject: Agribusiness
subject: Agricultural and Food Policy
subject: Community/Rural/Urban Development
subject: Consumer/Household Economics
subject: Food Consumption/Nutrition/Food Safety
subject: Health Economics and Policy
subject: certification,
subject: logo,
subject: logotype,
subject: labels,
subject: food,
subject: quality policy

description: A high level of competition combined with food safety related risks gives cause for producers to offer and consumers to seek means of reducing the risk involved in transactions. One such means is a food labelling system. The article presents the results of research aimed at determining the awareness of the food labelling system among young people. A diagnostic survey method was used in the research and a tool constituted an anonymous questionnaire that was completed by 451 students. The awareness may be described as low. The symbol of a green leaf (called EURO-LISTEK in Polish) was recognized by a fifth of the respondents. The awareness of quality symbols was much lower. A few of the respondents named the product on which a symbol was put and the greatest difficulty was to specify the content which a given symbol delivered. The fact that the system of labelling food products is hardly known is particularly troubling since the research was conducted two years after the Agricultural Market Agency launched a campaign promoting the EU system of symbols called “Three Symbols of Taste”. It is recommended that advertising campaigns are designed in such a way as to inform young consumers about the advantages of certified food products as well as to carry out educational activities targeted at young consumers.
description: DOI: 10.17306/J.JARD.2017.00203
A Repeated Game Freeway Lane Changing Model
Creators: name: Kang, Kyungwon
name: Rakha, Hesham A
Publisher: name: arXiv
Year: 2020
Subjects: subject: Physics and Society (physics.soc-ph)
subject: Multiagent Systems (cs.MA)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: Lane changes are complex safety and throughput critical driver actions. Most lane changing models deal with lane-changing maneuvers solely from the merging driver's standpoint and thus ignore driver interaction. To overcome this shortcoming, we develop a game-theoretical decision-making model and validate the model using empirical merging maneuver data at a freeway on-ramp. Specifically, this paper advances our repeated game model in a previous paper by using updated payoff functions. Validation results using the NGSIM empirical data show that the developed game-theoretical model provides better prediction accuracy compared to previous work, with correct predictions approximately 86 percent of the time. In addition, a sensitivity analysis demonstrates the rationality and sensitivity of the model to variations in various factors. To provide evidence of the benefits of the repeated game approach, which takes into account previous decision-making results, a case study is conducted using an agent-based simulation model. The proposed repeated game model produces superior performance to a one-shot game model, when simulating actual freeway merging behaviors. Finally, this lane change model, which captures the collective decision-making between human drivers, can be used to develop automated vehicle driving strategies.
description: The paper has been submitted to Sensors
THE USE OF CLUSTER ANALYSIS IN THE RESEARCH ON SHOPPING PREFERENCES REGARDING REGIONAL PRODUCTS FROM LUBELSKIE VOIVODESHIP
Wykorzystanie analizy skupień w badaniach preferencji zakupowych produktów regionalnych województwa lubelskiego
Creators: name: Jan Czeczelewski,
name: Andrzej Tucki,
name: Czeczelewska, Ewa
name: Jan Czeczelewski,
name: Andrzej Tucki,
name: Czeczelewska, Ewa
Publisher: name: Unknown
Year: 2017
Subjects: subject: Agribusiness
subject: Agricultural and Food Policy
subject: Consumer/Household Economics
subject: Food Consumption/Nutrition/Food Safety
subject: Health Economics and Policy
subject: Institutional and Behavioral Economics
subject: Marketing
subject: FOS: Economics and business
subject: cluster analysis,
subject: regional products,
subject: consumer behaviours

description: An increasing awareness of consumers is reflected in a growing demand for products which are manufactured in a particular way, with unique ingredients, or which are of a particular origin. The analysis of consumers’ preferences makes it possible to define factors which determine the purchase of regional products. The aim of the work was to identify factors which determine the purchase of regional products from Lubelskie Voivodeship on the basis of cluster analysis using Ward’s hierarchical agglomerative clustering method. The research was carried out in 2016 and included 383 individuals. Statistical analysis of results was conducted on the basis of frequency analysis and cluster analysis. According to the respondents, the most frequently purchased regional products included bakery products (47%), dairy products (35.3%), meat (33.3%), and alcoholic beverages (29.4%). Over 53% of the respondents claimed that the prices of regional products are too high, every third person (29.6%) concluded that they are reasonable, while slightly over 3% of the respondents said they are low. Television and the Internet as well as close relatives and friends appeared to be the best forms of reaching the client with information concerning regional products when bringing them out on the market. However, the most common places where regional products were purchased were food fairs and festivals. Every second respondent purchased regional products at least once a month. Additionally, it was revealed that the consumers’ income was not a decisive factor when purchasing regional products. Despite financial stability, individuals who could be defined as “rich” in Polish conditions purchased regional products relatively rarely.
description: DOI: 10.17306/J.JARD.2017.00319
Formation of the first stars and black holes
Creators: name: Haemmerlé, Lionel
name: Mayer, Lucio
name: Klessen, Ralf S.
name: Hosokawa, Takashi
name: Madau, Piero
name: Bromm, Volker
Publisher: name: arXiv
Year: 2020
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: We review the current status of knowledge concerning the early phases of star formation during cosmic dawn. This includes the first generations of stars forming in the lowest mass dark matter halos in which cooling and condensation of gas with primordial composition is possible at very high redshift ($z > 20$), namely metal-free Population III stars, and the first generation of massive black holes forming at such early epochs, the so-called black hole seeds. The formation of black hole seeds as end states of the collapse of Population III stars, or via direct collapse scenarios, is discussed. In particular, special emphasis is given to the physics of supermassive stars as potential precursors of direct collapse black holes, in light of recent results of stellar evolution models, and of numerical simulations of the early stages of galaxy formation. Furthermore, we discuss the role of the cosmic radiation produced by the early generation of stars and black holes at high redshift in the process of reionization.
NON-FARMING ENTREPRENEURSHIP IN THE FARM ACTIVITY DIVERSIFICATION PROCESS
Przedsiębiorczość pozarolnicza w procesach dywersyfikacji działalności gospodarstw rolnych
Creators: name: Adam Czudec,
name: Zając, Dariusz
name: Adam Czudec,
name: Zając, Dariusz
Publisher: name: Unknown
Year: 2017
Subjects: subject: Agribusiness
subject: Agricultural and Food Policy
subject: Agricultural Finance
subject: Community/Rural/Urban Development
subject: Farm Management
subject: nonfarming entrepreneurship,
subject: farmers,
subject: multifunctional agriculture

description: The article shows the scale and reasons of regional disparities in the development of selected activities in multifunctional farmers in Poland, which are a an example of the diversification of farm activities. Moreover, they presented the benefits for farmers as a result of taking up and pursuit of selected multifunctional activities. Empirically, the paper is based on primary and secondary data. The primary data is derived from the findings of a survey carried out among farmers (interview with a questionnaire), whereas the secondary data comes from the Central Statistical Office of Poland. The findings of the research show high regional diversification of the development level of farmers’ nonfarming activity. The highest discrepancy was observed in the case of the percentage of organic farms in the total number of farms. Less intense were those in the case of the share of agritourism farm households, whereas the lowest regional differences were recorded for the farm households holding its own direct sales scheme of farm produce. Another important finding from the survey of the farmers running nonfarming economic activity is that the highest advantages of such activity are the increase in farm household income and improvement of the farm family living standard. However, farmers found it difficult to observe any advantages of nonfarming economic activity in rural areas.
description: DOI: 10.17306/J.JARD.2017.00208
Computing classification of interacting fermionic symmetry-protected topological phases using topological invariants
Creators: name: Ouyang, Yunqing
name: Wang, Qing-Rui
name: Gu, Zheng-Cheng
name: Qi, Yang
Publisher: name: arXiv
Year: 2020
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: High Energy Physics - Theory (hep-th)
subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: In recent years, great success has been achieved on the classification of symmetry-protected topological (SPT) phases for interacting fermion systems by using generalized cohomology theory. However, the explicit calculation of generalized cohomology theory is extremely hard due to the difficulty of computing obstruction functions. In this paper, based on the physical picture of topological invariants and mathematical techniques in homotopy algebra, we develop an algorithm to resolve this hard problem. It is well known that cochains in the cohomology of the symmetry group, which are used to enumerate the SPT phases, can be expressed equivalently in different linear bases, known as the resolutions. By expressing the cochains in a reduced resolution containing much fewer basis than the choice commonly used in previous studies, the computational cost is drastically reduced. In particular, it reduces the computational cost for infinite discrete symmetry groups, like the wallpaper groups and space groups, from infinity to finity. As examples, we compute the classification of two-dimensional interacting fermionic SPT phases, for all 17 wallpaper symmetry groups
description: 6+11 pages, 2 tables. As published in Chin. Phys. Lett
Additional file 3 of Cetuximab PET delineated changes in cellular distribution of EGFR upon dasatinib treatment in triple negative breast cancer
Creators: name: McKnight, Brooke N.
name: Seongho Kim
name: Boerner, Julie L.
name: Nerissa T. Viola
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Cancer
subject: Plant Biology

description: Additional file 3: Fig. S3. Western blots of MDA-MB-231 (A) and MDA-MB-468 (B).
Estimating the Material Properties of Fabric from Video
Creators: name: Bouman, Katherine L.
name: Xiao, Bei
name: Battaglia, Peter
name: Freeman, William T.
Publisher: name: American University
Year: 2023

description: This ICCV2013 paper is the Open Access version, provided by the Computer Vision Foundation. The authoritative version of this paper is available in IEEE Xplore.
Estimating the Material Properties of Fabric from Video
Creators: name: Bouman, Katherine L.
name: Xiao, Bei
name: Battaglia, Peter
name: Freeman, William T.
Publisher: name: Computer Vision Foundation
Year: 2023
Subjects: classificationCode: 46
subject: Information and computing sciences

description: This ICCV2013 paper is the Open Access version, provided by the Computer Vision Foundation. The authoritative version of this paper is available in IEEE Xplore.
Diverse Perspectives, Divergent Models: Cross-Cultural Evaluation of Depression Detection on Twitter
Creators: name: Ali, Nuredin
name: Zhang, Charles Chuankai
name: Mayo, Ned
name: Chancellor, Stevie
Publisher: name: arXiv
Year: 2024
Subjects: subject: Computation and Language (cs.CL)
subject: FOS: Computer and information sciences

description: Social media data has been used for detecting users with mental disorders, such as depression. Despite the global significance of cross-cultural representation and its potential impact on model performance, publicly available datasets often lack crucial metadata related to this aspect. In this work, we evaluate the generalization of benchmark datasets to build AI models on cross-cultural Twitter data. We gather a custom geo-located Twitter dataset of depressed users from seven countries as a test dataset. Our results show that depression detection models do not generalize globally. The models perform worse on Global South users compared to Global North. Pre-trained language models achieve the best generalization compared to Logistic Regression, though still show significant gaps in performance on depressed and non-Western users. We quantify our findings and provide several actionable suggestions to mitigate this issue.
description: 6 pages, 2 figures, NAACL 2024 Main Conference
Explicit solution of the (quantum) elliptic Calogero-Sutherland model
Creators: name: Langmann, Edwin
Publisher: name: arXiv
Year: 2004
Subjects: subject: Mathematical Physics (math-ph)
subject: Exactly Solvable and Integrable Systems (nlin.SI)
subject: FOS: Physical sciences
subject: 81Q05, 35Q58

description: We derive explicit formulas for the eigenfunctions and eigenvalues of the elliptic Calogero-Sutherland model as infinite series, to all orders and for arbitrary particle numbers and coupling parameters. The eigenfunctions obtained provide an elliptic deformation of the Jack polynomials. We prove in certain special cases that these series have a finite radius of convergence in the nome $q$ of the elliptic functions, including the two particle (= Lamé) case for non-integer coupling parameters.
description: v1: 17 pages. The solution is given as series in q but only to low order. v2: 30 pages. Results significantly extended. v3: 35 pages. Paper completely revised: the results of v1 and v2 are extended to all orders
pi^+ - pi^0 mass difference and S parameter in the large N_f QCD
Creators: name: Harada, Masayasu
name: Kurachi, Masafumi
name: Yamawaki, Koichi
Publisher: name: arXiv
Year: 2005
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: In the framework of the Schwinger-Dyson equation and the Bethe-Salpeter equation in the improved ladder approximation, we calculate the S parameter and an analogue of the π^+ - π^0 mass difference Δm_π^2 \equiv m_{π^+}^2 -m_{π^0}^2 as well as the NG boson decay constant f_πon the same footing in the large N_f QCD, through the difference between the vector current correlator Π_{VV} and the axial-vector current correlator Π_{AA}. Approaching the chiral phase transition point α_*\to α_{\rm cr} (=π/4) from the broken phase, where α_* is the the gauge coupling on the infrared fixed point, Δm_π^2 as well as f_π^2 goes to zero with the essential-singularity scaling (Miransky scaling), while the ratio indicates a blowing up enhancement reflecting the characteristic behavior of the large N_f QCD as a walking theory which is expected to scale as Δm_π^2/f_π^2 \sim (α_*/α_{\rm cr}-1)^{-1/2}. On the other hand, the S parameter takes values somewhat smaller than that of the real-life QCD and indicates slightly decreasing tendency as we approach the phase transition point.
description: Change of title & abstract, new reference, new discussions on ultraviolet contributions from outside of those explicitly calculated. 32 pages, 12 figures
Additional file 2 of Cetuximab PET delineated changes in cellular distribution of EGFR upon dasatinib treatment in triple negative breast cancer
Creators: name: McKnight, Brooke N.
name: Seongho Kim
name: Boerner, Julie L.
name: Nerissa T. Viola
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Cancer
subject: Plant Biology

description: Additional file 2: Fig. S2. Binding of [89Zr]Zr-cetuximab displayed as tumor-to-tissue ratios (obtained from image analysis) over time in MDA-MB-231 (A) and MDA-MB-468 (B). Autoradiographs obtained from excised MDA-MB-231(C) and MDA-MB-468 (D).
Machine learning on DNA-encoded libraries: A new paradigm for hit-finding
Creators: name: McCloskey, Kevin
name: Sigel, Eric A.
name: Kearnes, Steven
name: Xue, Ling
name: Tian, Xia
name: Moccia, Dennis
name: Gikunju, Diana
name: Bazzaz, Sana
name: Chan, Betty
name: Clark, Matthew A.
name: Cuozzo, John W.
name: Guié, Marie-Aude
name: Guilinger, John P.
name: Huguet, Christelle
name: Hupp, Christopher D.
name: Keefe, Anthony D.
name: Mulhern, Christopher J.
name: Zhang, Ying
name: Riley, Patrick
Publisher: name: arXiv
Year: 2020
Subjects: subject: Quantitative Methods (q-bio.QM)
subject: Machine Learning (cs.LG)
subject: FOS: Biological sciences
subject: FOS: Computer and information sciences

description: DNA-encoded small molecule libraries (DELs) have enabled discovery of novel inhibitors for many distinct protein targets of therapeutic value through screening of libraries with up to billions of unique small molecules. We demonstrate a new approach applying machine learning to DEL selection data by identifying active molecules from a large commercial collection and a virtual library of easily synthesizable compounds. We train models using only DEL selection data and apply automated or automatable filters with chemist review restricted to the removal of molecules with potential for instability or reactivity. We validate this approach with a large prospective study (nearly 2000 compounds tested) across three diverse protein targets: sEH (a hydrolase), ERα (a nuclear receptor), and c-KIT (a kinase). The approach is effective, with an overall hit rate of {\sim}30% at 30 {\textmu}M and discovery of potent compounds (IC50 <10 nM) for every target. The model makes useful predictions even for molecules dissimilar to the original DEL and the compounds identified are diverse, predominantly drug-like, and different from known ligands. Collectively, the quality and quantity of DEL selection data; the power of modern machine learning methods; and access to large, inexpensive, commercially-available libraries creates a powerful new approach for hit finding.
Optical and Near-Infrared Color Profiles in Nearby Early-Type Galaxies and The Implied Age and Metallicity Gradients
Creators: name: Wu, Hong
name: Shao, Zhengyi
name: Mo, H. J.
name: Xia, Xiaoyang
name: Deng, Zugan
Publisher: name: arXiv
Year: 2004
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present results of age and metallicity gradient analysis inferred from both optical and near-infrared surface photometry. The analysis is based on a sample of 36 nearby early-type galaxies, obtained from the Early Data Release of the Sloan Digital Sky Survey and the Two Micron All Sky Survey. Surface brightness profiles were derived in each band, and used to study the color gradients of the galaxies. Using simple stellar population models with both optical and near infrared colors, we may interpret the color gradients in term of age and metallicity gradients of galaxies. Using $g_Z \equiv d \log Z_{\rm met} / d \log R $ and $g_A = d \log {\rm Age} / d \log R $ to represent the metallicity and age gradients, we found a median value of $g_Z=-0.25\pm 0.03$ for the metallicity gradient, with a dispersion $σ_{g_Z}=0.19\pm0.02$. The corresponding values for the age gradient were $g_A=0.02\pm 0.04$ and $σ_{g_A}=0.25\pm0.03$. These results are in good agreement with recent observational results, as well as with recent simulations that suggest both monolithic collapse and major merger have played important roles in the formation of early-type galaxies. Our results demonstrate the potential of using multi-waveband colors obtained from current and future optical and infrared surveys in constraining the age and metallicity gradients of early-type galaxies.
description: 40 pages, 14 figures. Revised version. Accepted by ApJ
Additional file 5 of In silico analysis of phylogeny, structure, and function of arsenite oxidase from unculturable microbiome of arsenic contaminated soil
Creators: name: Siddhartha Pal
name: Sengupta, Kriti
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 5. Evaluation reports predicted protein models of representative enzyme obtained from SAVES server.
Homogenization of two-phase flow in porous media from Pore to Darcy Scale: A phase-field approach
Creators: name: Metzger, Stefan
name: Knabner, Peter
Publisher: name: arXiv
Year: 2020
Subjects: subject: Fluid Dynamics (physics.flu-dyn)
subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences
subject: 35B27, 76S05, 76D05, 65L60, 35G20, 35Q35

description: We extend the two-scale expansion approach of periodic homogenization to include time scales and thus can tackle the full instationary Navier-Stokes-Cahn-Hilliard model at the pore scale as microscale. Time scale separation allows us to keep microscale dynamics, responsible e.g. for hysteresis, and arrive at a numerically tractable micro-macro model including coupled generalized Darcy's laws.
Looking against the light : How perception of translucency depends on lighting direction
Creators: name: Xiao, Bei
name: Walter, Bruce
name: Gkioulekas, Ioannis
name: Zickler, Todd
name: Adelson, Edward H.
name: Bala, Kavita
Publisher: name: American University
Year: 2023

description: Article published in: Journal of Vision (2014) 14(3):17, 1–22.
In-situ electrochemical fabrication of natural contacts on single nanowires
Creators: name: Wu, Wenhao
name: DiMaria, J. B.
name: Yoo, Han G.
name: Pan, Shanlin
name: Rothberg, L. J.
name: Zhang, Yong
Publisher: name: arXiv
Year: 2003
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: We report a template-based in-situ electrochemical method for fabricating natural electric contacts on single nanowires using a pair of cross-patterned electrodes. Such electric contacts are highly stable upon thermal cycling between room temperature and milli-Kelvin temperatures. Direct imaging of the single-nanowire contacts using scanning electron microscopy is also demonstrated.
description: 13 pages, 4 figures
Additional file 3 of Barriers and facilitators to implementation of menu labelling interventions from a food service industry perspective: a mixed methods systematic review
Creators: name: Kerins, Claire
name: McHugh, Sheena
name: McSharry, Jenny
name: Reardon, Caitlin M.
name: Hayes, Catherine
name: Perry, Ivan J.
name: Geaney, Fiona
name: Seery, Suzanne
name: Kelly, Colette
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: Additional file 3. Standardised data extraction form. This file provides the data extraction form used in this review.
Prior-Informed AGN-Host Spectral Decomposition Using PyQSOFit
Creators: name: Ren, Wenke
name: Guo, Hengxiao
name: Shen, Yue
name: Silverman, John D.
name: Burke, Colin J.
name: Wang, Shu
name: Wang, Junxian
Publisher: name: arXiv
Year: 2024
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We introduce an improved method for decomposing the emission of active galactic nuclei (AGN) and their host galaxies using templates from principal component analysis (PCA). This approach integrates prior information from PCA with a penalized pixel fitting mechanism which improves the precision and effectiveness of the decomposition process. Specifically, we have reduced the degeneracy and over-fitting in AGN-host decomposition, particularly for those with low signal-to-noise ratios (SNR), where traditional methods tend to fail. By applying our method to 76,565 SDSS Data Release 16 quasars with $z<0.8$, we achieve a success rate of $\approx$ 94%, thus establishing the largest host-decomposed spectral catalog of quasars to date. Our fitting results consider the impact of the host galaxy on the overestimation of the AGN luminosity and black hole mass ($M_{\rm BH}$). Furthermore, we obtained stellar velocity dispersion ($σ_*$) measurements for 4,137 quasars. The slope of the $M_{\rm BH}-σ_*$ relation in this subsample is generally consistent with previous quasar studies beyond the local universe. Our method provides a robust and efficient approach to disentangle the AGN and host galaxy components across a wide range of SNRs and redshifts.
description: 21 pages, 9 figures, 2 tables. Accepted by ApJ
Production of light-flavor hadrons in pp collisions at $\sqrt{s}$ = 7 and $\sqrt{s}$ = 13 TeV
Creators: name: ALICE Collaboration
Publisher: name: arXiv
Year: 2020
Subjects: subject: Nuclear Experiment (nucl-ex)
subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: The production of $π^{\pm}$, $\rm{K}^{\pm}$, $\rm{K}^{0}_{S}$, $\rm{K}^{*}(892)^{0}$, $\rm{p}$, $ϕ(1020)$, $Λ$, $Ξ^{-}$, $Ω^{-}$, and their antiparticles was measured in inelastic proton-proton (pp) collisions at a center-of-mass energy of $\sqrt{s}$ = 13 TeV at midrapidity ($|y|<0.5$) as a function of transverse momentum ($p_{\rm{T}}$) using the ALICE detector at the CERN LHC. Furthermore, the single-particle $p_{\rm{T}}$ distributions of $\rm{K}^{0}_{S}$, $Λ$, and $\overlineΛ$ in inelastic pp collisions at $\sqrt{s}$ = 7 TeV are reported here for the first time. The $p_{\rm{T}}$ distributions are studied at midrapidity within the transverse momentum range $0\leq p_{\rm{T}}\leq20$ GeV/$c$, depending on the particle species. The $p_{\rm{T}}$ spectra, integrated yields, and particle yield ratios are discussed as a function of collision energy and compared with measurements at lower $\sqrt{s}$ and with results from various general-purpose QCD-inspired Monte Carlo models. A hardening of the spectra at high $p_{\rm{T}}$ with increasing collision energy is observed, which is similar for all particle species under study. The transverse mass and $x_{\rm{T}}\equiv2p_{\rm{T}}/\sqrt{s}$ scaling properties of hadron production are also studied. As the collision energy increases from $\sqrt{s}$ = 7 to 13 TeV, the yields of non- and single-strange hadrons normalized to the pion yields remain approximately constant as a function of $\sqrt{s}$, while ratios for multi-strange hadrons indicate enhancements. The $p_{\rm{T}}$-differential cross sections of $π^{\pm}$, $\rm{K}^{\pm}$ and $\rm{p}$ ($\overline{\rm{p}}$) are compared with next-to-leading order perturbative QCD calculations, which are found to overestimate the cross sections for $π^{\pm}$ and $\rm{p}$ ($\overline{\rm{p}}$) at high $p_{\rm{T}}$.
description: 54 pages, 18 figures, 8 tables, authors from page 49, published version, figures at http://alice-publications.web.cern.ch/node/6218
Data-driven models and computational tools for neurolinguistics: a language technology perspective
Creators: name: Artemova, Ekaterina
name: Bakarov, Amir
name: Artemov, Aleksey
name: Burnaev, Evgeny
name: Sharaev, Maxim
Publisher: name: arXiv
Year: 2020
Subjects: subject: Machine Learning (cs.LG)
subject: Computation and Language (cs.CL)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: In this paper, our focus is the connection and influence of language technologies on the research in neurolinguistics. We present a review of brain imaging-based neurolinguistic studies with a focus on the natural language representations, such as word embeddings and pre-trained language models. Mutual enrichment of neurolinguistics and language technologies leads to development of brain-aware natural language representations. The importance of this research area is emphasized by medical applications.
description: 37 pages, 1 figure
Looking against the light : How perception of translucency depends on lighting direction
Creators: name: Xiao, Bei
name: Walter, Bruce
name: Gkioulekas, Ioannis
name: Zickler, Todd
name: Adelson, Edward H.
name: Bala, Kavita
Publisher: name: Journal of Vision
Year: 2023
Subjects: classificationCode: 46
subject: Information and computing sciences

description: Article published in: Journal of Vision (2014) 14(3):17, 1–22.
Measurement of isolated photon-hadron correlations in $\sqrt{s_{\rm{NN}}}$ = 5.02 TeV pp and p-Pb collisions
Creators: name: ALICE Collaboration
Publisher: name: arXiv
Year: 2020
Subjects: subject: Nuclear Experiment (nucl-ex)
subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: This paper presents isolated photon-hadron correlations using pp and p-Pb data collected by the ALICE detector at the LHC. For photons with |$η$| < 0.67 and 12 < $p_{\rm{T}}$ < 40 GeV/$c$, the associated yield of charged particles in the range |$η$| < 0.80 and 0.5 < $p_{\rm{T}}$ < 10 GeV/$c$ is presented. These momenta are much lower than previous measurements at the LHC. No significant difference between pp and p-Pb is observed, with PYTHIA 8.2 describing both data sets within uncertainties. This measurement constrains nuclear effects on the parton fragmentation in p-Pb collisions, and provides a benchmark for future studies of Pb-Pb collisions.
description: 25 pages, 5 captioned figures, 2 tables, authors from page 20, published version, figures at http://alice-publications.web.cern.ch/node/6298
CHI 1994-2013 : Mapping Two Decades of Intellectual Progress through Co-word Analysis
Creators: name: Liu, Yong
name: Goncalves, Jorge
name: Ferreira, Denzil
name: Xiao, Bei
name: Hosio, Simo
name: Kostakos, Vassilis
Publisher: name: CHI 2014
Year: 2023
Subjects: classificationCode: 46
subject: Information and computing sciences

description: Conference proceedings.
Kinematics of a simple reciprocal model swimmer at intermediate Reynolds numbers
Creators: name: Dombrowski, Thomas
name: Klotsa, Daphne
Publisher: name: arXiv
Year: 2020
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Biological Physics (physics.bio-ph)
subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences

description: We computationally study the kinematics of a simple model reciprocal swimmer (asymmetric dumbbell) as a function of the Reynolds number (Re) and investigate how the onset and gradual increase of inertia impacts the swimming behavior: a reversal in the swim direction, flow directions, and the swim stroke. We divide the swim stroke into the expansion and compression of the two spheres and relate them to power and recovery strokes. We find that the switch in swim direction also corresponds to a switch in power and recovery strokes. We obtain expressions for the mean swimming velocity by collapsing the net displacement during expansion and compression under power law relationships with respect to Re, the swimmer's amplitude, and the distance between the two spheres. Analyzing the fluid flows, we see the averaged flow field during expansion always resembles a pusher and compression always a puller, but when averaged over the whole cycle, the flow that dominates is the one that occurs during the power stroke. We also relate the power and recovery strokes to the swimming efficiency during times of expansion and compression, and we find that the power stroke is, surprisingly, not always more efficient than the recovery stroke. Our results may have important implications for biology and ultimately the design of artificial swimmers.
A Search for Variable Stars and Planetary Occultations in NGC 2301 II: Variability
Creators: name: Howell, Steve B.
name: VanOutryve, Cassandra
name: Tonry, John L.
name: Everett, Mark E.
name: Schneider, Raelin
Publisher: name: arXiv
Year: 2005
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We performed R-band time series observations of the young, metal rich open cluster NGC 2301 for 12 nights in Feb. 2004. B images were also obtained and color magnitude diagrams, having limits of R=19.5 and B=21.5, were produced. Only asmall effort was made to determine cluster membership as our magnitude limits are far deeper than previously published values. Our photometric precision, for the brightest 5 magnitudes of sources, is 1-2 mmag. We determine that for the $\sim$4000 stars which have time-series data, 56% are variable and of these, approximately 13% are observed to exhibit periodic light curves ranging from tens of minutes to days. We present some examples of the light curves obtained and produce cuts in variability space based on parameters such as color and amplitude. The percentage of variability is approximately equal across all colors with the majority of variables having amplitudes of 0.15 magnitudes or less. In general, redder stars show larger variability amplitudes. We find a smooth decline in the number of periodic variables toward longer period. This decline is probably due to a transition from intrinsic to extrinsic variability and, in part, to our limited observing period of 12 nights. Essentially all the A and F main sequence stars in our sample are variable ($\sim$2 mmag and larger) and most present complex light curves containing multiple periods suggestive of their inclusion in the $δ$Sct and $γ$Dor classes. A variable non-cluster member giant and two variable white dwarf candidates are discussed. Our equational description of variability is shown to be an excellent predictive tool for determining the cumulative fraction of variables that will be observed in a photometric survey. Our entire dataset is available electronically.
description: 25 pages, 21 figures Accepted to PASP
Manipulations of individual molecules by scanning probe microscopy
Creators: name: Dudko, O.
name: Filippov, A. E.
name: Klafter, J.
name: Urbakh, M.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: In this Letter we suggest a new method of manipulating individual molecules with scanning probes using a "pick-up-and put-down" mode. We demonstrate that the number of molecules picked up by the tip and deposited in a different location can be controlled by adjusting the pulling velocity of the tip and the distance of closest approach of the tip to the surface.
RenderToolbox3 : MATLAB tools that facilitate physically based stimulus rendering for vision research
Creators: name: Heasly, Benjamin S.
name: Cottaris, Nicolas P.
name: Lichtman, Daniel P.
name: Xiao, Bei
name: Brainard, David H.
Publisher: name: American University
Year: 2023

description: Article published in: Journal of Vision (2014) 14(2):6, 1–22.
Additional file 2 of Barriers and facilitators to implementation of menu labelling interventions from a food service industry perspective: a mixed methods systematic review
Creators: name: Kerins, Claire
name: McHugh, Sheena
name: McSharry, Jenny
name: Reardon, Caitlin M.
name: Hayes, Catherine
name: Perry, Ivan J.
name: Geaney, Fiona
name: Seery, Suzanne
name: Kelly, Colette
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: Additional file 2. Review search strategy. This file provides the search strategy used in this review.