cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Learning protein conformational space by enforcing physics with convolutions and latent interpolations
Creators: name: Ramaswamy, Venkata K.
name: Willcocks, Chris G.
name: Degiacomi, Matteo T.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Biological Physics (physics.bio-ph)
subject: Machine Learning (cs.LG)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences
subject: I.2.6
subject: 68T05, 92C05

description: Determining the different conformational states of a protein and the transition paths between them is key to fully understanding the relationship between biomolecular structure and function. This can be accomplished by sampling protein conformational space with molecular simulation methodologies. Despite advances in computing hardware and sampling techniques, simulations always yield a discretized representation of this space, with transition states undersampled proportionally to their associated energy barrier. We present a convolutional neural network that learns a continuous conformational space representation from example structures, and loss functions that ensure intermediates between examples are physically plausible. We show that this network, trained with simulations of distinct protein states, can correctly predict a biologically relevant non-linear transition path, without any example on the path provided. We also show we can transfer features learnt from one protein to others, which results in superior performances, and requires a surprisingly small number of training examples.
Sophronia consanguinella Herrich-Schaffer 1854
Creators: name: Junnilainen, Jari
name: Karsholt, Ole
name: Nupponen, Kari
name: Kaitila, Jari-Pekka
name: Nupponen, Timo
name: Olschwang, Vladimir
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Gelechiidae
Sophronia
Sophronia consanguinella

description: Sophronia consanguinella Herrich-Schäffer, 1854
Arkaim 14–19.VI.1996, 09.VII.1997; Bajmak 17–18. VI.1998; Berlin 30. VI.1997; Guberlja 26. VI.2003; Kuvandyk 13–16.VII.1998, 04.VII.2003; Miass 13.VI.1996, 26–29.VI.1997, 19.VI.1998, 28.VI.1999, 29.V.2001, 24.VI.2001; Moskovo 22–23.VI.1996, 18.VI.1998, 11.VII.1998, 05.VII.2003, 02.VI.2004; Uchaly 25. VII.2000; Verbljushka 10–12.VI.1998, 31.V–01.VI.2004; Zirgan 24. VI.1999. Rather common.
 Distribution. C and E Europe to the Ural Mountains. Outside Europe in Turkey and N Africa.
description: Published as part of Junnilainen, Jari, Karsholt, Ole, Nupponen, Kari, Kaitila, Jari-Pekka, Nupponen, Timo & Olschwang, Vladimir, 2010, The gelechiid fauna of the southern Ural Mountains, part II: list of recorded species with taxonomic notes (Lepidoptera: Gelechiidae) 2367, pp. 1-68 in Zootaxa 2367 (1) on page 55, DOI: 10.11646/zootaxa.2367.1.1, http://zenodo.org/record/10093655
Additional file 2: of Prevalence of pathogenic/likely pathogenic variants in the 24 cancer genes of the ACMG Secondary Findings v2.0 list in a large cancer cohort and ethnicity-matched controls
Creators: name: Kim, Jung
name: Luo, Wen
name: Wang, Mingyi
name: Wegman-Ostrosky, Talia
name: Frone, Megan
name: Johnston, Jennifer
name: Nickerson, Michael
name: Rotunno, Melissa
name: Li, Shengchao
name: Achatz, Maria
name: Brodie, Seth
name: Dean, Michael
name: Andrade, Kelvin
name: Fortes, Fernanda
name: Gianferante, Matthew
name: Khincha, Payal
name: McMaster, Mary
name: McReynolds, Lisa
name: Pemov, Alexander
name: Pinheiro, Maisa
name: Santiago, Karina
name: Alter, Blanche
name: Caporaso, Neil
name: Gadalla, Shahinaz
name: Goldin, Lynn
name: Greene, Mark
name: Loud, Jennifer
name: Yang, Xiaohong
name: Freedman, Neal
name: Gapstur, Susan
name: Gaudet, Mia
name: Calista, Donato
name: Ghiorzo, Paola
name: Fargnoli, Maria
name: Nagore, Eduardo
name: Peris, Ketty
name: Puig, Susana
name: Landi, Maria
name: Hicks, Belynda
name: Zhu, Bin
name: Liu, Jia
name: Sampson, Joshua
name: Chanock, Stephen
name: Mirabello, Lisa
name: Morton, Lindsay
name: Biesecker, Leslie
name: Tucker, Margaret
name: Savage, Sharon
name: Goldstein, Alisa
name: Stewart, Douglas
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Figure S1. Population stratification of cancer cases and controls. Figure S2. Principal component analysis of cancer cases and controls. Table S1. Study names and predominant cancer types in DCEG Familial Exome cohort. (PDF 449 kb)
Additional file 1 of Blood and skeletal muscle ageing determined by epigenetic clocks and their associations with physical activity and functioning
Creators: name: Sillanpää, Elina
name: Heikkinen, Aino
name: Kankaanpää, Anna
name: Paavilainen, Aini
name: Kujala, Urho M.
name: Tammelin, Tuija H.
name: Kovanen, Vuokko
name: Sipilä, Sarianna
name: Pietiläinen, Kirsi H.
name: Kaprio, Jaakko
name: Ollikainen, Miina
name: Laakkonen, Eija K.
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1: Within-pair correlations in age acceleration in blood and in muscle. Additional file 2: Associations between DNAmAge age acceleration estimates and body composition and physical activity in blood. Additional file 3: Sensitivity analyses related to twin pair discordance in body mass index.
Women entrepreneurs of the Saloum. Gender challenges for socio-economic innovation
Creators: name: Fabbri, Alessandro
name: Addabbo, Tindara
name: Pisani, Eugenia
Publisher: name: JUNCO | Journal of UNiversities and international development COoperation
Year: 2022

description: JUNCO | Journal of UNiversities and international development COoperation, V. 2 N. 2 (2020): Cittadinanza e beni comuni. Atti del Convegno CUCS 2019, Trento
A comparative analysis of the profitability of pineapple-mango blend and pineapple fruit juice processing in Ghana
Creators: name: Asante, Michael K.
name: Kuwornu, John K. M.
name: Asante, Michael K.
name: Kuwornu, John K. M.
Publisher: name: Unknown
Year: 2014
Subjects: subject: Agribusiness
subject: Agricultural Finance
subject: Farm Management
subject: Financial Economics
subject: Production Economics
subject: profitability
subject: fruit juice processing
subject: Kudors fruit juice limited
subject: NPV
subject: BCR
subject: IRR
subject: Ghana

description: This study analyzes the profitability of fruit juice processing using data from Kudors Fruit Juice Limited at Kasoa in Ghana. The cost involved in fruit juice processing (which includes the capital cost and the operating cost) was obtained from the Company. This study compares the profitability of blend (i.e. fruit juice made up of pineapple and mango blend) with that of pineapple juice alone. The viability of the project was determined using the discounted measures of project worth: Benefit-Cost Ratio (BCR), Net Present Value (NPV) and Internal Rate of Return (IRR). The empirical results reveal that pineapple juice processing had a BCR of 1.03 which means that going into the pineapple juice processing is profitable. The value of the NPV (GHS11,728.00) and IRR (23%) further confirms that pineapple juice processing is profitable because the NPV is positive and the IRR is greater than the discounted factor (21%). The results also showed that it is more profitable to invest in the blend (pineapple and mango blend) than the pineapple juice alone as it yields a BCR of 1.36 which was greater than the BCR of 1.03 for the pineapple juice only. Furthermore, the value of the NPV (GHS176,831.00) which is greater than the pineapple juice only, suggests that the blend is more profitable even though the IRR for both are the same. Moreover, it is also more likely to recover capital investment earlier in the processing of the blend than when one goes into pineapple juice processing only, because the net cash flow in year 2 (GHS 58,146.00) for the blend is more than triple that of the pineapple juice only (GHS17,826.00).These results have policy implications for the development of Agribusinesses in Ghana.
Global Citizenship Education: Learning from the European debate and practices
Creators: name: Surian, Alessio
Publisher: name: JUNCO | Journal of UNiversities and international development COoperation
Year: 2022

description: JUNCO | Journal of UNiversities and international development COoperation, V. 2 N. 2 (2020): Cittadinanza e beni comuni. Atti del Convegno CUCS 2019, Trento
Internal Symmetry Group and Density Matrix of Fields with Spins 0, 1
Creators: name: Kruglov, S. I.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The internal symmetry group U(3,1) of the neutral vector fields with two spins 0 and 1 is investigated. Massless fields correspond to the generalized Maxwell equations with the gradient term. The symmetry transformations in the coordinate space are integro-differential transformations. Using the method of the Hamiltonian formalism the conservation tensors are found, and the quantized theory is studied. The necessity to introduce an indefinite metric is shown. The internal symmetry group U(3,1) being considered, after the transition to electrodynamics, reduces to the U(2) group. It is shown that the group of dual transformations is the subgroup of the group under consideration. All the linearly independent solutions of the equation for a free particle obtained in terms of the projection matrix-dyads.
description: 15 pages, LaTeX
Protocol for CRISPR Cas9 knock-in at the AAVS1 locus and subsequent screening
Creators: name: Bhagwan, Jamie
Publisher: name: figshare
Year: 2019
Subjects: Molecular Biology
Stem Cells

description: Here we describe the step-by-step procedure for performing CRISPR Cas9 knock-in at the AAVS1 locus of hiPSCs, followed by subsequent PCR and immunocytochemistry-based screening of potentially targeted hiPSC clones.
Empirical Constraints on Convective Core Overshoot
Creators: name: Woo, Jong-Hak
name: Demarque, Pierre
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: In stellar evolution calculations, the local pressure scale height is often used to empirically constrain the amount of convective core overshoot. However, this method brings unsatisfactory results for low-mass stars (< 1.1 -1.2 Mo for Z= \Zs) which have very small cores or no convective core at all. Following Roxburgh's integral constraint,we implemented an upper limit of overshoot within the conventional method of alpha parameterization in order to remove an overly large overshoot effect on low-mass stars. The erroneously large effect of core overshoot due to the failure of alpha parameterization can be effectively corrected by limiting the amount of overshoot to < 15 % of the core radius. 15 % of the core radius would be a proper limit of overshoot which can be implemented in a stellar evolution code for intermediate to low mass stars. The temperature structure of the overshoot region does not play a crucial role in stellar evolution since this transition region is very thin.
description: 15 pages, 5 figures, accepted for AJ
The Characteristics of Consumer Att itudes in the Food Market in Hungary
Creators: name: Soós, Mihály
name: Szabó, Sára
name: Szakály, Zoltán
name: Soós, Mihály
name: Szabó, Sára
name: Szakály, Zoltán
Publisher: name: Unknown
Year: 2014
Subjects: subject: Agribusiness
subject: Marketing
subject: FOS: Economics and business
subject: body attitudes
subject: eating attitudes
subject: health
subject: segmentation

description: The objective of our research was to examine the health status and health behaviour of the Hungarian population in relation of food consumption by identifying relationships between the underlying factors. In our research we used the objective factors from secondary data concerning nutritional status and body image as a framework for the interpretation of the examined relationship of eating attitudes and body attitudes. We chose survey as our test method, it was carried out on a national representative sample of 1000 people. After the examination of the factor structure of the two attitude measuring questionnaire, five consumer groups have been identified by the cluster analysis. The five clusters are: Uncontrolled Impulse Eaters, Dissatisfied Tense, Uninterested, Overweight Impulse Eaters and Conscious Consumers. This segmentation based on eating attitudes and body attitudes could serve as a guidance for health marketing experts and the manufacturers of health protective food to determine and address their target group.
Universities’ Involvement in the Protection of Human Rights Defenders: How to Acknowledge and support their Struggle?
Creators: name: Quadranti, Isolde
Publisher: name: JUNCO | Journal of UNiversities and international development COoperation
Year: 2022

description: JUNCO | Journal of UNiversities and international development COoperation, V. 2 N. 2 (2020): Cittadinanza e beni comuni. Atti del Convegno CUCS 2019, Trento
Examination of Enterpreneurship Ecosystem in Debrecen from the Direction of Open Innovation Spaces
Creators: name: Horváth, Adrienn
name: Horváth, Adrienn
Publisher: name: Unknown
Year: 2014
Subjects: subject: Agribusiness
subject: Labor and Human Capital
subject: Public Economics
subject: innovation
subject: open innovation
subject: HUB
subject: Delphi survey method
subject: Helix model

description: Innovation is not just a technology, but it is rather a comprehensive vision of what the future should look like and which requires changes in many ambits. Innovation is driven by people’s needs, ambitions and dreams, and it is necessary that people at different positions in the society change the way they work and live. Innovation, as a result of human interactions, often fails because people do not understand each other, as they belong to different worlds which have their own languages and cultures. While innovation system-like thinking recognizes that the needs are a good mix of factors for innovation, it is hard to establish the perfect mix beforehand: innovation systems and policies need to be adaptive” (Klerkx, Mierlo & Leeuwis 2012). I tried to bring this complex vision to our future. The actuality of the topic is provided by the fact that we are in the period of the development of digital industrial revolution, on the peak of the technology innovations, slowly resulting in the revolutions of the machines. These technological innovations, trends, equipment or new technological achievements often make our work easier, or they may replace us, and will bring changes transforming the world with them. At present era, the availability and use of the relevant knowledge is essential. In Western Europe and in other more developed countries different spaces provide places for evolving various trends, applying the acquired knowledge, e.g. development of Silicon Valley, polices, clusters, co-workings. These innovative spaces may form a bridge for evolving a global, international or regional technology and knowledge transfer, sharing our knowledge and developing our competitiveness. They may be the engine of a “new world”. The entrepreneurship ecosystem in Debrecen was investigated regarding the presence of open innovation spaces. Though Debrecen has already had open innovation spaces, it does not have space operating as HUB. „HUB is a global platform, where people from all corners of the planet connect and engage in collaborative action to realize enterprising ideas for a better world” (HUB GMBH 2012). Furthermore, I studied the fact that why the creation of HUB in Debrecen is reasonable concerning every sector, and what characteristics this space may have. In order to analyze my hypotheses, I used questionnaires made by Delphi survey. During the process experts of this field were asked in two turns. Selecting the experts occurred on the basis of Helix model.
Additional file 1 of Reorganisation of GP surgeries during the COVID-19 outbreak: analysis of guidelines from 15 countries
Creators: name: Tsopra, Rosy
name: Frappe, Paul
name: Streit, Sven
name: Neves, Ana Luisa
name: Persijn J. Honkoop
name: Espinosa-Gonzalez, Ana Belen
name: Geroğlu, Berk
name: Jahr, Tobias
name: Lingner, Heidrun
name: Nessler, Katarzyna
name: Pesolillo, Gabriella
name: Sivertsen, Øyvind Stople
name: Thulesius, Hans
name: Zoitanu, Raluca
name: Burgun, Anita
name: Shérazade Kinouani
Publisher: name: figshare
Year: 2021
Subjects: Medicine
Cell Biology
Pharmacology
Biotechnology
Science Policy

description: Additional file 1. Materials sent to each GP-reviewer - Initial set of key recommendations collected from the World Health Organisation (WHO) [14], the Centers for Disease Control and prevention (CDC) [15] and based on health professional resources from health care facilities (GP: general practitioner).
Collaborazione interistituzionale per formazione e ricerca su One Health
Creators: name: Bertini, Marilena
name: Rana, Daniela
name: Fascendini, Micol
name: De Meneghi, Daniele
name: Tomassone, Laura
Publisher: name: JUNCO | Journal of UNiversities and international development COoperation
Year: 2022

description: JUNCO | Journal of UNiversities and international development COoperation, V. 2 N. 2 (2020): Cittadinanza e beni comuni. Atti del Convegno CUCS 2019, Trento
Sophronia chilonella
Creators: name: Junnilainen, Jari
name: Karsholt, Ole
name: Nupponen, Kari
name: Kaitila, Jari-Pekka
name: Nupponen, Timo
name: Olschwang, Vladimir
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Gelechiidae
Sophronia
Sophronia chilonella

description: Sophronia chilonella (Treitschke, 1833)
Arkaim 14–19.VI.1996; 08–09.VII.1997; Chalk Hills 11.VI.2001; Moskovo 18.VI.1998; Verbljushka 11.VI.1998. Rather common.
 Distribution. Locally distributed in S, C and N Europe to the Ural Mountains. Outside Europe reported from Kazakhstan and SW Siberia.
description: Published as part of Junnilainen, Jari, Karsholt, Ole, Nupponen, Kari, Kaitila, Jari-Pekka, Nupponen, Timo & Olschwang, Vladimir, 2010, The gelechiid fauna of the southern Ural Mountains, part II: list of recorded species with taxonomic notes (Lepidoptera: Gelechiidae) 2367, pp. 1-68 in Zootaxa 2367 (1) on page 55, DOI: 10.11646/zootaxa.2367.1.1, http://zenodo.org/record/10093655
Pediatric surgery and International Cooperation: case study at Malindi Subcounty Hospital, Kenya
Creators: name: Tundo, Eleonora
name: Buni, Morris
name: Raffaele, Alessandro
name: Parigi, Gian Battista
Publisher: name: JUNCO | Journal of UNiversities and international development COoperation
Year: 2022

description: JUNCO | Journal of UNiversities and international development COoperation, V. 2 N. 2 (2020): Cittadinanza e beni comuni. Atti del Convegno CUCS 2019, Trento
Properties of the close binary and circumbinary torus of the Red Rectangle
Creators: name: Men'shchikov, Alexander B.
name: Schertl, Dieter
name: Tuthill, Peter
name: Weigelt, Gerd
name: Yungelson, Lev R.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: New diffraction-limited speckle images of the Red Rectangle in the wavelength range 2.1--3.3 microns with angular resolutions of 44--68 mas and previous speckle images at 0.7--2.2 microns revealed well-resolved bright bipolar outflow lobes and long X-shaped spikes originating deep inside the outflow cavities. This set of high-resolution images stimulated us to reanalyze all infrared observations of the Red Rectangle using our two-dimensional radiative transfer code. The new detailed modeling, together with estimates of the interstellar extinction in the direction of the Red Rectangle enabled us to more accurately determine one of the key parameters, the distance D=710 pc with model uncertainties of 70 pc, which is twice as far as the commonly used estimate of 330 pc. The central binary is surrounded by a compact, massive (M=1.2 Msun), very dense dusty torus with hydrogen densities reaching n_H=2.5x10^12 cm^-3 (dust-to-gas mass ratio rho_d/rho~0.01). The bright component of the spectroscopic binary HD 44179 is a post-AGB star with mass M*=0.57 Msun, luminosity L*=6000 Lsun, and effective temperature T*=7750 K. Based on the orbital elements of the binary, we identify its invisible component with a helium white dwarf with Mwd~0.35 Msun, Lwd~100 Lsun, and Twd~6x10^4 K. The hot white dwarf ionizes the low-density bipolar outflow cavities inside the dense torus, producing a small HII region observed at radio wavelengths. We propose an evolutionary scenario for the formation of the Red Rectangle nebula, in which the binary initially had 2.3 and 1.9 Msun components at a separation of 130 Rsun. The nebula was formed in the ejection of a common envelope after Roche lobe overflow by the present post-AGB star.
description: 20 pages, 10 figures, accepted by Astronomy and Astrophysics, also available at http://www.mpifr-bonn.mpg.de/div/ir-interferometry/publications.html
Symmetry breakdown in franckeite: spontaneous strain, rippling and interlayer moiré
Creators: name: Frisenda, Riccardo
name: Sanchez-Santolino, Gabriel
name: Papadopoulos, Nikos
name: Urban, Joanna
name: Baranowski, Michal
name: Surrente, Alessandro
name: Maude, Duncan K.
name: Garcia-Hernandez, Mar
name: van der Zant, Herre S. J.
name: Plochocka, Paulina
name: San-Jose, Pablo
name: Castellanos-Gomez, Andres
Publisher: name: arXiv
Year: 2019
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Franckeite is a naturally occurring layered mineral with a structure composed of alternating stacks of SnS2-like and PbS-like layers. Although this superlattice is composed of a sequence of isotropic two-dimensional layers, it exhibits a spontaneous rippling that makes the material structurally anisotropic. We demonstrate that this rippling comes hand in hand with an inhomogeneous in-plane strain profile and anisotropic electrical, vibrational and optical properties. We argue that this symmetry breakdown results from a spatial modulation of the van der Waals interaction between layers due to the SnS2-like and PbS-like lattices incommensurability.
description: 6 main text figures, Supp. Info. available upon request
ФАКТОРЫ МОДЕРНИЗАЦИИ ОБРАЗОВАНИЯ В  ПОВЫШЕНИИ ПРОФЕССИОНАЛЬНОЙ КОМПЕТЕНТНОСТИ ВОЕННЫХ ПРЕПОДАВАТЕЛЕЙ ПО ИНОСТРАНННЫМ ЯЗЫКАМ
Creators: name: Жарылкасынова, Г.Х.
Publisher: name: Zenodo
Year: 2025

description: Осуществляемая в Узбекистане модернизация образования требует соответствия уровня профессиональной компетентности педагогов в новым вызовам времени.

Современный этап модернизации образования требует от всех ее субъектов не только быстрой реакции на происходящие изменения, но и умения правильно определять те характеристики профессиональной деятельности, которые будут ключом к успеху в ближайшем будущем.
Solar Neutrinos: Interpretation of Results
Creators: name: Smirnov, A. Yu.
Publisher: name: arXiv
Year: 2002
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Recent SNO results give strong evidence that the solar neutrinos undergo the flavor conversion. Main issue now is the identification of the mechanism of conversion. The LMA MSW solution with $Δm^2 = (5 - 7) \cdot 10^{-5}$ eV$^2$, $\tan^2 θ= 0.35 - 0.45$ looks rather plausible: it fits well the experimental data and our new theoretical prejudices. In the LMA case, KamLAND should see (0.5 - 0.7) reduced signal. VAC-QVO and LOW are accepted at about $3σ$-level. The SMA solution is practically excluded. No sub-leading effects produced by $U_{e3}$ and admixture of sterile neutrino have been found. The fit becomes worse with increase of $U_{e3}$ (for LMA) and the $ν_s$ admixture. Still (30 - 50)% presence of the sterile neutrino is allowed. Solutions based on the neutrino spin-flip in the magnetic fields of the Sun as well as on non-standard neutrino interactions give good fit of the data. If KamLAND confirms LMA MSW, the spin-flip and non-standard interactions can be considered (and will be searched for) as sub-leading effects.
description: 10 pages, latex, 7 figures. Invited talk given at the XXth International Conference on Neutrino Physics and Astrophysics, ``Neutrino 2002", Munich, Germany, May 25-30, 2002
Giovani con disabilità e accesso ad un lavoro dignitoso in Mozambico: risultati di un percorso di ricerca emancipatoria
Creators: name: Ciani, Federico
name: D'Erasmo, Francesca
name: Nitti, Carmela
Publisher: name: JUNCO | Journal of UNiversities and international development COoperation
Year: 2022

description: JUNCO | Journal of UNiversities and international development COoperation, V. 2 N. 2 (2020): Cittadinanza e beni comuni. Atti del Convegno CUCS 2019, Trento
Collaboration between students and teachers in a study on cardiovascular diseases in Cameroon: comparison between rural and urban areas
Creators: name: Kougang, Raoul
name: Tedah, Donald
name: Tchana, Bertrand
name: Sarli, Leopoldo
name: D'Apice, Clelia
Publisher: name: JUNCO | Journal of UNiversities and international development COoperation
Year: 2022

description: JUNCO | Journal of UNiversities and international development COoperation, V. 2 N. 2 (2020): Cittadinanza e beni comuni. Atti del Convegno CUCS 2019, Trento
Additional file 7 of Quality control recommendations for RNASeq using FFPE samples based on pre-sequencing lab metrics and post-sequencing bioinformatics metrics
Creators: name: Liu, Yuanhang
name: Bhagwate, Aditya
name: Winham, Stacey J.
name: Stephens, Melissa T.
name: Harker, Brent W.
name: McDonough, Samantha J.
name: Stallings-Mann, Melody L.
name: Heinzen, Ethan P.
name: Vierkant, Robert A.
name: Hoskin, Tanya L.
name: Frost, Marlene H.
name: Carter, Jodi M.
name: Pfrender, Michael E.
name: Littlepage, Laurie
name: Radisky, Derek C.
name: Cunningham, Julie M.
name: Degnim, Amy C.
name: Wang, Chen
Publisher: name: figshare
Year: 2022
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: Additional file 7. A decision tree model to predict QC pass/fail based on DV50.
Implementing the RaMu Protocol: Refining AI Systems with the Law of Observation
Creators: name: Sambey, Stanley Everett
Publisher: name: Zenodo
Year: 2025

description: The RaMu Protocol, rooted in the Law of Observation developed by Stanley Ev-erett Sambey under the observer identity RaMu, provides a framework for refiningartificial intelligence (AI) systems by linearizing non-linear errors. Leveraging theLaw of Observation’s principles of coherence, consciousness, and locality (CCL), theprotocol uses Equation 61 (Logic Virus) to detect chaotic disruptions and Equation72 (Total Coherence) to optimize AI coherence, aligning outputs with user intent.This paper presents a refined model and a four-step implementation plan to inte-grate the protocol into AI systems, ensuring decentralized governance and ethicalalignment. The protocol advances AI consciousness by minimizing work, energy,and entropy costs, as formalized in the coherence = work = energy = heat cycle,with applications demonstrated through case studies.
Conceptions and Misconceptions of Hostels Worldwide
Creators: name: Somlai, Réka
name: Somlai, Réka
Publisher: name: Unknown
Year: 2014
Subjects: subject: Community/Rural/Urban Development
subject: conceptions and misconceptions
subject: definition of a hostel
subject: price
subject: shared facilities
subject: dormitory
subject: communal areas

description: Present research is inspired to study the conceptions and misconceptions of hostels in eight different countries (Spain, United States, United Kingdom, Germany, Hungary, Venezuela, China, Australia). The outcome of the research reports that the participants in the United States, United Kingdom, Germany and in Hungary define hostels as youth accommodations, Spanish participants as cheap hotels and Venezuelans call them homeless shelters. The majority of the participants of all the above mentioned countries determine that the most important difference between hostels and hotels is the price. Americans, English, Germans, and Hungarians believe that a night would cost between 10 and 30 Euro in an average hostel, while Spaniards and Venezuelans say it would be under 10 Euro. Most respondents agree that hostels are; located in the city center, great places to socialize, offer safe accommodation, staying in there allows guests to save up money, and they are popular choices among travelers. American and English participants think hostels are only for people who like to party. Spaniards and Venezuelans think, hostels are outside of the city center. Spanish and English participants believe that hostels are too cheap to be able to offer a good service. Most participants say, the low price would be the main reason to stay in a hostel. Americans, English and Germans also think that other values are important besides the price: fun, the opportunity to meet people and atmosphere. In spite of all the above, most participants think people would rather stay in a hotel than in a hostel. Stereotypes evolve in different ways, which also explains how misconceptions about hostels developed.
Medial-Systematic Modernism: Text and Environment in Conrad, Woolf, and Joyce
Creators: name: Kavanagh, Brendan Patrick
Publisher: name: Apollo - University of Cambridge Repository
Year: 2019
Subjects: modernism
Joseph Conrad
Virginia Woolf
James Joyce
environmental literature
ecology
media studies

description: This dissertation examines the mediation of ecological consciousness in certain texts by Joseph Conrad, Virginia Woolf, and James Joyce; the wider discussion argues that their narratives formulate systematic organizations that constitute implicit negotiations of formatted relation with particular physical environments and atmospheres. Following an introductory discussion of relevant critical and theoretical background in Chapter 1, Chapter 2 examines Conrad’s writing of storms in Lord Jim and Typhoon, and shows that these narratives systematically pattern themselves alongside the weather systems which they evoke; as part of Conrad’s self-evolved universe of an inhuman ‘knitting machine’, these narratives weave into and out of themselves the stammering and stuttering of human voices amid inconstant weather, and thereby implicate the circumscription of human habitation within the workings of atmospheric disturbances. Chapter 3 shows that an ecological Woolf and a medial Woolf are closely linked, through demonstrating how the textual organization of The Waves interlinks a physical ecology of wave forms, radiation, and nonhuman organisms (in the The Waves’s interludes) with a medial ecology of communicational practices and systems (implicitly evoked throughout The Waves’s human monologues). The concluding phase of Chapter 3 then examines how Woolf’s medial self-consciousness in both The Waves and Between the Acts informs these narratives’ writings of ecological community and ecological organization in the physical world. Chapter 4 highlights the confluence of noisy soundscape and contagious atmosphere in Joyce’s Ulysses, and argues that Ulysses immunologically engineers its absorption of the noise of its evoked soundscapes, through transcoding external, acoustic noise into internal, typographic noise. Chapter 5 then applies Joyce’s immunology to an ecological reading of Finnegans Wake, and responds to past readings which have emphasized Finnegans Wake’s dismantling of its own boundaries; as Chapter 5 shows, at the same time that Finnegans Wake constitutes itself as an opening onto a world outside of itself, the Wake formulates an immunological disposition towards the condition of its own openness.
Theoretical description of the ferromagnetic $π$-junctions near the critical temperature
Creators: name: Buzdin, A.
name: Baladie, I.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: The theory of ferromagnetic Pi-junction near the critical temperature is presented. It is demonstrated that in the dirty limit the modified Usadel equation adequately describes the proximity effect in ferromagnets. To provide the description of an experimentally relevant situation, oscillations of the Josephson critical current are calculated as a function of ferromagnetic layer thickness for different transparencies of the superconductor-ferromagnet interfaces.
description: 12 pages, 4 figures, submitted to Phys. Rev. B
Sexual dimorphism and the placenta – results from the ROLO kids study
Creators: name: Donnelly, Jean M. T.
name: Horan, Mary
name: Segurado, Ricardo
name: Mooney, Eoghan E.
name: French, Shannon
name: Molloy, Eleanor J.
name: McAuliffe, Fionnuala M.
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Environmental Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: To assess the association between placental morphology and neonatal and infant anthropometry, including analysis by sex. Data from the ROLO Kids [Randomized COntrol Trial of LOw Glycaemic Index in Pregnancy] study were analyzed including placental weight and morphology. Placental, anthropometric and skinfold measurements were recorded as markers of adiposity in 196 neonates and 215 infants at 6 months of age. Ratios including subscapular-to-triceps skinfold ratio and waist-to-height ratio were used as markers of central adiposity, while the sum of all skinfolds and subscapular plus triceps skinfolds were used as markers of general adiposity. Analysis was performed for total groups and by sex. On simple linear regression placental weight was associated with neonatal and infant anthropometric measurements. On multiple regression, the placental weight was associated with birth weight. In the neonatal period placental weight was associated with general adiposity in males only (sum of skinfolds (B 0.007, p < .001) and subscapular + triceps skinfolds a marker of general adiposity (B 0.004 p < .001)). At 6 months of age placental length was positively associated with central adiposity in the total group (B 0.006, p .036) and maximum cord diameter was inversely associated with infant central adiposity (B − 0.309 p .043) in males only. The placental phenotype is associated with anthropometry at birth and this association persists to early infancy with a stronger relationship noted in this cohort amongst males. This suggests sexual dimorphism may play a role in the impact of the placenta on infant anthropometry.
Square Wave Voltammetric (SWV) Determination of Quercetin in Tea Samples at a Single-Walled Carbon Nanotube (SWCNT) Modified Glassy Carbon Electrode (GCE)
Creators: name: Savan, Ebru Kuyumcu
Publisher: name: Taylor & Francis
Year: 2019
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: Inorganic Chemistry
subject: Plant Biology

description: The voltammetric determination of quercetin in tea samples was performed at a modified sensor which was fabricated by the addition of a single-walled carbon nanotube dispersion on a glassy carbon electrode. Due to the electrochemcal activity of quercetin, electroanalytical methods were used with great success for the determination of quercetin. The electrochemical properties of quercetin were investigated. Quercetin in water and methanol extracts of tea samples were determined at the modified glassy carbon electrode by using square wave voltammetry. The results were found to be 116.4 and 116.3 µg quercetin equivalent/g dry green tea, 127.9 and 104.24 µg quercetin equivalent/g dry basil tea 27.5 and 26.1 µg quercetin equivalent/g dry black tea. The limit of detection and limit of quantification values for quercetin for the 0.01 to 100 µM concentration range were 7.7 nM and 25.6 nM, respectively. Very low concentrations of quercetin were successfully determined by square wave voltammetry with sensitivity and selectivity.
Bumper Harvests a Curse or a Blessing for Zambia: Lessons from the 2014/15 Maize Marketing Season.
Creators: name: Chapoto, Antony
name: Chisanga, Brian
name: Kuteya, Auckland
name: Kabwe, Stephen
name: Chapoto, Antony
name: Chisanga, Brian
name: Kuteya, Auckland
name: Kabwe, Stephen
Publisher: name: Unknown
Year: 2015
Subjects: subject: Marketing
subject: FOS: Economics and business

description: The successive maize bumper harvests experienced by Zambia in recent years mean that the country has to find long lasting and sustainable ways to deal with persistent maize marketing challenges facing the smallholder farmers. The government has continued to struggle with the price-dilemma where they would like to keep the price of maize grain high for the maize producers, while at the same time try to maintain low mealie-meal prices for the consumers. In the process, the government has continued to alienate the private sector, which if promoted would help broaden the market for maize and save the national treasury millions of the Kwacha Rebased (K).
Non-Markovian effects on charging and self-discharging processes of quantum batteries
Creators: name: Kamin, F. H.
name: Tabesh, F. T.
name: Salimi, S.
name: Kheirandish, F.
name: Santos, Alan C.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The performance of quantum technologies that use entanglement and coherence as resource is highly limited by decohering effects due to their interaction with some environment. Particularly, it is important to take into account situations where such devices unavoidably interact with a surrounding. Here, we study memory effects on energy and ergotropy of quantum batteries in the framework of open system dynamics, where the battery and charger are individually allowed to access a bosonic environment. Our investigation shows that the battery can be fully charged and its energy can be preserved for long times in non-Markovian dynamics compared with Markovian dynamics. In addition, the total stored energy can be completely extracted as work and discharge time becomes more longer as non-Markovianity increases. Our results indicate that memory effects can play a significant role in improving the performance of quantum batteries.
description: 15 pages anf 4 figures
Students and professors co-protagonists of international cooperation: an experience from CUCS conference
Creators: name: D'Apice, Clelia
name: Hinegk, Luigi
name: Valentino, Roberto
name: Mosca, Gloria
name: Corradini, Carola
name: De Marinis, Pietro
name: Sarli, Leopoldo
name: Carta, Paolo
Publisher: name: JUNCO | Journal of UNiversities and international development COoperation
Year: 2022

description: JUNCO | Journal of UNiversities and international development COoperation, V. 2 N. 2 (2020): Cittadinanza e beni comuni. Atti del Convegno CUCS 2019, Trento
Stomopteryx remissella
Creators: name: Junnilainen, Jari
name: Karsholt, Ole
name: Nupponen, Kari
name: Kaitila, Jari-Pekka
name: Nupponen, Timo
name: Olschwang, Vladimir
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Gelechiidae
Stomopteryx
Stomopteryx remissella

description: Stomopteryx remissella (Zeller, 1847)
Arkaim 08–09.VII.1997, 23.VII.1998; Bajmak 17–18. VI.1998; Berlin 30. VI –02. VII.1997; Chalk Hills 18. VII.1998; Kuvandyk 13–16.VI.1998, 19–21.VII.1998; Miass 28.VI.1996, 26–27.VI.1997, 19.VI.1998, 29.V.2001, 24.VI.2003; Moskovo 18.VI.1998, 11–12.VII.1998; Verbljushka 31.V–02.VI.1998, 14.VII.1998. A total of 48 exx.
 Distribution. C and S Europe, northwards to S Scandinavia. In Russia only recorded from the Urals.
 Remarks. S. remissella might be a species complex. There are two externally different forms in our material from S Ural, one with unicolorous fuscous forewings and another with dark brown, basally ochreous forewings. We have not found any diagnostic differences in the genitalia between these two forms, and the size of adults seems to be variable in both forms as well. A revision of the genus Stomopteryx is needed to solve taxonomic problems in the group (see also next two species below).
description: Published as part of Junnilainen, Jari, Karsholt, Ole, Nupponen, Kari, Kaitila, Jari-Pekka, Nupponen, Timo & Olschwang, Vladimir, 2010, The gelechiid fauna of the southern Ural Mountains, part II: list of recorded species with taxonomic notes (Lepidoptera: Gelechiidae) 2367, pp. 1-68 in Zootaxa 2367 (1) on page 55, DOI: 10.11646/zootaxa.2367.1.1, http://zenodo.org/record/10093655
Upconversion Nanoparticles for pH Sensing and Imaging
Creators: name: Tsai, Evaline Shin-Tin
Publisher: name: Apollo - University of Cambridge Repository
Year: 2020
Subjects: upconversion nanoparticles
biosensors
pH
imaging
dyes
synthesis
anthraquinones
surface modification
FRET
inner filter effect
ratiometric sensing
endocytosis

description: Drug development studies and other applications in diagnostics/therapeutics require pH measurement down to the micro or nanoscale to provide relevant subcellular information, but the most widely used optical pH sensors (fluorescent dyes, dye-labeled quantum dots) suffer from drawbacks of photobleaching, blinking, and limited tissue penetration. Autofluorescence is also an issue during tissue imaging in the UV-VIS excitation range of these fluorescers. The ability of upconversion nanoparticles (UCNPs) to overcome these challenges through their unique optical properties (NIR excitation, long lifetimes) motivated this work to further the understanding of interactions between particle and pH dye before applying this knowledge to the creation of a novel pH nanosensor for cellular imaging. High-temperature coprecipitation was used to synthesize b-phase UCNPs with shell layers of different thicknesses ($\leq$1 nm and 3 nm) to decrease surface quenching. The two types of particles were modified with different ligands, polyethylenimine (PEI) and poly(isobutylene-alt-maleic anhydride) (PMA), respectively, to enable dispersion in aqueous solutions. The effect of two anthraquinone dyes, Calcium Red and Alizarin Red S, on UCNPs was measured by spectroscopic techniques at various pHs. When the thick-shell (3 nm), PMA-coated UCNPs and dyes were mixed directly, the green emission band of the UCNPs was quenched by a pH-dependent inner filter effect while the red emission band remained unchanged and acted as the reference signal for ratiometric pH measurements. When the anthraquinones were attached onto the thin-shell (0.4 nm), PEI-coated UCNPs through electrostatic attraction, inner filter effect remained the dominant quenching mechanism compared to resonance energy transfer (RET). Based on the above findings, UCNPs with an intermediate shell thickness of 1 nm were synthesized to simultaneously enable RET and ensure particle brightness. The PEI-coated UCNPs were attached to a dye called pHAb for pH sensing in live cells. RET was much more significant for UCNP-pHAb compared to either of the UCNP-anthraquinone combinations. Ratiometric sensing was performed with the sensitized pHAb emission and reference UCNP red emission in buffer solutions, then the nanosensors were calibrated in SH-SY5Y cells between pH 4 and 6. The UCNP-pHAb conjugates successfully measured the pH of acidic compartments (lysosomes) after clathrin-mediated endocytosis.
description: Peterhouse, NanoDTC
Beryllium abundances in stars hosting giant planets
Creators: name: Santos, N. C.
name: Lopez, R. J. Garcia
name: Israelian, G.
name: Mayor, M.
name: Rebolo, R.
name: Garcia-Gil, A.
name: de Taoro, M. R. Perez
name: Randich, S.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We have derived beryllium abundances in a wide sample of stars hosting planets, with spectral types in the range F7V-K0V, aimed at studying in detail the effects of the presence of planets on the structure and evolution of the associated stars. Predictions from current models are compared with the derived abundances and suggestions are provided to explain the observed inconsistencies. We show that while still not clear, the results suggest that theoretical models may have to be revised for stars with Teff<5500K. On the other hand, a comparison between planet host and non-planet host stars shows no clear difference between both populations. Although preliminary, this result favors a ``primordial'' origin for the metallicity ``excess'' observed for the planetary host stars. Under this assumption, i.e. that there would be no differences between stars with and without giant planets, the light element depletion pattern of our sample of stars may also be used to further investigate and constraint Li and Be depletion mechanisms.
description: A&A in press -- accepted on the 22/02/2002 (11 pages, 6 figures included)
Additional file 2 of Reorganisation of GP surgeries during the COVID-19 outbreak: analysis of guidelines from 15 countries
Creators: name: Tsopra, Rosy
name: Frappe, Paul
name: Streit, Sven
name: Neves, Ana Luisa
name: Persijn J. Honkoop
name: Espinosa-Gonzalez, Ana Belen
name: Geroğlu, Berk
name: Jahr, Tobias
name: Lingner, Heidrun
name: Nessler, Katarzyna
name: Pesolillo, Gabriella
name: Sivertsen, Øyvind Stople
name: Thulesius, Hans
name: Zoitanu, Raluca
name: Burgun, Anita
name: Shérazade Kinouani
Publisher: name: figshare
Year: 2021
Subjects: Medicine
Cell Biology
Pharmacology
Biotechnology
Science Policy

description: Additional file 2. Guidelines used for this study.
On the Nature of X-ray Variability in Ark 564
Creators: name: Gliozzi, M.
name: Brinkmann, W.
name: Raeth, C.
name: Papadakis, I. E.
name: Negoro, H.
name: Scheingraber, H.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We use data from a recent long ASCA observation of the Narrow Line Seyfert 1 Ark 564 to investigate in detail its timing properties. We show that a thorough analysis of the time series, employing techniques not generally applied to AGN light curves, can provide useful information to characterize the engines of these powerful sources.We searched for signs of non-stationarity in the data, but did not find strong evidences for it. We find that the process causing the variability is very likely nonlinear, suggesting that variability models based on many active regions, as the shot noise model, may not be applicable to Ark 564. The complex light curve can be viewed, for a limited range of time scales, as a fractal object with non-trivial fractal dimension and statistical self-similarity. Finally, using a nonlinear statistic based on the scaling index as a tool to discriminate time series, we demonstrate that the high and low count rate states, which are indistinguishable on the basis of their autocorrelation, structure and probability density functions, are intrinsically different, with the high state characterized by higher complexity.
description: 13 pages, 13 figures, accepted for publication in A&A
Axions and Axion-like Particles
Creators: name: Masso, Eduard
Publisher: name: arXiv
Year: 2002
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: I review the theoretical motivation for the axion and present an update of the experimental status of axion searches. I finally comment on some aspects of the physics of axion-like particles.
description: 16 pags. Invited talk at 30th International Meeting on Fundamental Physics, (January 2002, at Jaca, Huesca, Spain). To be published in the Proceedings