cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Dynamic and Energetic Stabilization of Persistent Currents in Bose-Einstein Condensates
Creators: name: Law, K. J. H.
name: Neely, T. W.
name: Kevrekidis, P. G.
name: Anderson, B. P.
name: Bradley, A. S.
name: Carretero-Gonzalez, R.
Publisher: name: arXiv
Year: 2014
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: Pattern Formation and Solitons (nlin.PS)
subject: FOS: Physical sciences

description: We study conditions under which vortices in a highly oblate harmonically trapped Bose-Einstein condensate (BEC) can be stabilized due to pinning by a blue-detuned Gaussian laser beam, with particular emphasis on the potentially destabilizing effects of laser beam positioning within the BEC. Our approach involves theoretical and numerical exploration of dynamically and energetically stable pinning of vortices with winding number up to $S=6$, in correspondence with experimental observations. Stable pinning is quantified theoretically via Bogoliubov-de Gennes excitation spectrum computations and confirmed via direct numerical simulations for a range of conditions similar to those of experimental observations. The theoretical and numerical results indicate that the pinned winding number, or equivalently the winding number of the superfluid current about the laser beam, decays as a laser beam of fixed intensity moves away from the BEC center. Our theoretical analysis helps explain previous experimental observations, and helps define limits of stable vortex pinning for future experiments involving vortex manipulation by laser beams.
description: 8 pages 5 figures
Transfer of different types of optical qubits over a lossy environment
Creators: name: Kim, Hoyong
name: Park, Jinwoo
name: Jeong, Hyunseok
Publisher: name: arXiv
Year: 2014
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We compare three different types of optical qubits for information transfer via quantum teleportation and direction transmission under photon losses. The three types of qubits are (1) qubits using the vacuum and the single-photon (VSP) states, (2) single-photon qubits using polarization degrees of freedom, i.e., polarized single-photon (PSP) qubits, and (3) coherent-state qubits that use two coherent states with opposite phases as the qubit basis. Our analysis shows that the teleportation scheme outperforms the direct transmission for most of cases as far as fidelities are concerned. Overall, VSP qubits are found to be the most efficient for both the direct transmission and teleportation under photon loss effects. The coherent-state qubits are more robust than PSP qubits either when their amplitudes are small as $|α| \lesssim 1.22$ or when photon loss effects are strong. Our results would provide useful and timely information for the development of practical optical quantum information processing particularly in the context of hybrid architectures.
description: 6 pages, 4 figures, minor revisions, to be published in Phys. Rev. A
Direct bandgap silicon quantum dots achieved via electronegative capping
Creators: name: Poddubny, A. N.
name: Dohnalová, K.
Publisher: name: arXiv
Year: 2014
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: We propose a novel concept of achieving silicon quantum dots with radiative rates enhanced by more than two orders of magnitude up to the values characteristic for direct band gap semiconductors. Our tight-binding simulations show how the surface engineering can dramatically change the density of confined electrons in real- and $k$-space and give rise to the new conduction band levels in $Γ$-valley, thus promoting the direct radiative transitions. The effect may be realized by covering the silicon dots with covalently bonded electronegative ligands, such as alkyl or teflon chains and/or by embedding in highly electronegative medium.
description: 5 pages, 3 figures+ Supplementary Materials
Modes and Mode Volumes of Leaky Optical Cavities and Plasmonic Nanoresonators
Creators: name: Kristensen, Philip Trøst
name: Hughes, Stephen
Publisher: name: arXiv
Year: 2013
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Optics (physics.optics)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Electromagnetic cavity modes in photonic and plasmonic resonators offer rich and attractive regimes for tailoring the properties of light-matter interactions. Yet there is a disturbing lack of a precise definition for what constitutes a cavity mode, and as a result their mathematical properties remain largely unspecified. The lack of a definition is evidenced in part by the diverse nomenclature at use - "resonance", "leaky mode", "quasimode", to name but a few - suggesting that the dissipative nature of cavity modes somehow makes them different from other modes, but an explicit distinction is rarely made. This perspective article aims to introduce the reader to some of the subtleties and working definitions that can be rigorously applied when describing the modal properties of leaky optical cavities and plasmonic nanoresonators. We describe some recent development in the field, including {calculation methods for quasinormal modes of both photonic and plasmonic resonators and the concept of a generalized effective mode volume, and we} illustrate the theory with several representative cavity structures from the fields of photonic crystals and nanoplasmonics.
description: Accepted for publication in ACS Photonics as a perspectives article
Production cross section of neutron-rich isotopes with radioactive and stable beams
Creators: name: Mun, Myeong-Hwan
name: Adamian, G. G.
name: Antonenko, N. V.
name: Oh, Yongseok
name: Kim, Youngman
Publisher: name: arXiv
Year: 2014
Subjects: subject: Nuclear Theory (nucl-th)
subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: The production cross section of neutron-rich isotopes of Ca, Zn, Te, Xe, and Pt are predicted in the diffusive multi-nucleon transfer reactions with stable and radioactive beams. With these isotopes one can treat the neutron shell evolution beyond N = 28, 50, 82, and 126. Because of the small cross sections, the production of nuclei near the neutron drip line requires the optimal choice of reaction partners and bombarding energies.
description: 7pages, 7 figures, REVTeX
Indicator factsheet - Fitness for transport of equine animals
Creators: name: Schenkenfelder, Josef
name: Winckler, Christoph
Publisher: name: EURCAW Ruminants & Equines
Year: 2024
Subjects: Animal welfare
transport
fitness
equine
indicator

description: Livestock are transported for a number of reasons and in most cases this is an unfamiliar and threatening event in an animal’s life, which can lead to distress, injury or even death if not properly planned and executed. Council Regulation (EC) No 1/2005 specifies that no animal shall be transported unless it is fit for the intended journey. Currently no agreed scientific definition of the concept of fitness for transport exists but a number of welfare consequences have been identified as being highly relevant to the welfare during transport. In this Indicator factsheet methods for assessing whether an equine animal is fit for transportation and recommendations for inspection are described.
Master's thesis recital (bassoon)
Creators: name: Gray, Khalil
Publisher: name: The University of Texas at Austin
Year: 2023
Subjects: Bassoon and piano music
Sonatas (Bassoon and piano)
Chamber music

description: Double helix / Brandon -- Bassoon sonata, op.168 / Saint-Saens -- Ciranda das sete notas / Villa-Lobos -- Fantasiestücke, op.73 / Schumann
ΜΟΧΕ: «Αράντα, Αντόνιο ντε», τόμ. 3, σ. 222.
Creators: name: Vasileiadis, Pavlos D.
Publisher: name: Zenodo
Year: 2014
Subjects: Pavlos Vasileiadis
Aranda, Antonio de
Αράντα, Αντόνιο ντε
Παύλος Βασιλειάδης

description: English title: “Aranda, Antonio de,” Encyclopedia ΜΟΧΕ vol. 3, p. 222. ISBN SET 9789608094598
Association between TLR2, TLR4, and TLR5 genetic variants and the risk of hepatocellular carcinoma in Moroccan population
Creators: name: Zerrad, Chaimaa
name: Lkhider, Mustapha
name: Belkouchi, Abdelkader
name: Tanouti, Ikram-Allah
name: Badre, Wafaa
name: Tahiri, Mohamed
name: Ayassi, Sarra
name: Marchio, Agnès
name: Pineau, Pascal
name: Benjelloun, Soumaya
name: Ezzikouri, Sayeh
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Environmental Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Virology

description: Hepatocellular carcinoma (HCC) is the fifth most common human malignancy and the fourth most frequent cause of cancer-related deaths worldwide. Toll-like receptors (TLRs), are known to play a key role in hepatocarcinogenesis through induction of inflammation. We aimed to investigate the association between TLR2 rs3804099, TLR4 rs4986790, rs4986791, and rs11536889 and TLR5 rs5744174 and HCC risk in a total of 306 Moroccan subjects, including 152 HCC patient and 154 controls using a TaqMan allelic discrimination assay. Our result showed that the frequency of TLR4 rs11536889 C allele was higher in control group than in HCC patients (OR = 0.52, 95% CI = 0.30-0.88, p = 0.01). Moreover, under the dominant model, we observed that CG/CC genotypes were protective factors against HCC risk (OR = 0.51, 95% CI = 0.28-0.91, p = 0.02). However, no significant differences were found in the allele and genotype frequencies of TLR4 rs4986790 and rs4986791, between HCC patients and controls. Similarly, genotypic frequencies of TLR2 and TLR5 polymorphisms did not differ significantly between HCC patients and controls. However, TLR4 haplotype analysis revealed that ACC haplotype may be protective of HCC risk in patients with HCC (OR = 0.53, 95% CI = 0.31-0.92, p = 0.02). In conclusion, our result suggest that TLR4 rs11536889 polymorphism and ACC haplotype may decrease risk of hepatocellular carcinoma in Moroccan population
Ultra-weak sector, Higgs boson mass, and the dilaton
Creators: name: Allison, Kyle
name: Hill, Christopher T.
name: Ross, Graham G.
Publisher: name: arXiv
Year: 2014
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The Higgs boson mass may arise from a portal coupling to a singlet field $σ$ which has a very large VEV $f \gg m_\text{Higgs}$. This requires a sector of "ultra-weak" couplings $ζ_i$, where $ζ_i \lesssim m_\text{Higgs}^2 / f^2$. Ultra-weak couplings are technically naturally small due to a custodial shift symmetry of $σ$ in the $ζ_i \rightarrow 0$ limit. The singlet field $σ$ has properties similar to a pseudo-dilaton. We engineer explicit breaking of scale invariance in the ultra-weak sector via a Coleman-Weinberg potential, which requires hierarchies amongst the ultra-weak couplings.
description: 6 pages
Additional file 10 of Molecular intrinsic subtypes, genomic, and immune landscapes of BRCA-proficient but HRD-high ER-positive/HER2-negative early breast cancers
Creators: name: Ballot, Elise
name: Galland, Loïck
name: Mananet, Hugo
name: Boidot, Romain
name: Arnould, Laurent
name: Desmoulins, Isabelle
name: Mayeur, Didier
name: Kaderbhai, Courèche
name: Ilie, Silvia
name: Hennequin, Audrey
name: Bergeron, Anthony
name: Derangère, Valentin
name: Ghiringhelli, François
name: Truntzer, Caroline
name: Ladoire, Sylvain
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 10: Supplemental figure 9 (S9): Violin plots representing the number of pathogenic or likely pathogenic somatic mutations associated with homologous recombination (HR) according to HRD and BRCA 1/2 mutational status in ER+/HER2- tumors (n = 606).
Additional file 11 of Molecular intrinsic subtypes, genomic, and immune landscapes of BRCA-proficient but HRD-high ER-positive/HER2-negative early breast cancers
Creators: name: Ballot, Elise
name: Galland, Loïck
name: Mananet, Hugo
name: Boidot, Romain
name: Arnould, Laurent
name: Desmoulins, Isabelle
name: Mayeur, Didier
name: Kaderbhai, Courèche
name: Ilie, Silvia
name: Hennequin, Audrey
name: Bergeron, Anthony
name: Derangère, Valentin
name: Ghiringhelli, François
name: Truntzer, Caroline
name: Ladoire, Sylvain
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 11: Supplemental table 2: Factors associated with Overall survival by univariate and multivariate analysis using Cox models with lasso penalty.
Additional file 12 of Molecular intrinsic subtypes, genomic, and immune landscapes of BRCA-proficient but HRD-high ER-positive/HER2-negative early breast cancers
Creators: name: Ballot, Elise
name: Galland, Loïck
name: Mananet, Hugo
name: Boidot, Romain
name: Arnould, Laurent
name: Desmoulins, Isabelle
name: Mayeur, Didier
name: Kaderbhai, Courèche
name: Ilie, Silvia
name: Hennequin, Audrey
name: Bergeron, Anthony
name: Derangère, Valentin
name: Ghiringhelli, François
name: Truntzer, Caroline
name: Ladoire, Sylvain
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 12: Supplemental figure 10 (S10): Overall survival and progression-free interval according to BRCA 1/2 mutated status and HRD score level in ER+/HER2- tumors (n = 606). All variables were adjusted on T and N stages. A–B. Forest plots of hazard ratio (HR) for the association of the clinical variables and immune scores with overall survival (A) and progression-free interval (B) according to BRCA 1/2 mutational status and HRD score level. Red lines: patients with BRCA mutated tumors, green lines: patients with BRCA WT HRD-high tumors, blue lines: patients with BRCA WT HRD-low tumors. Horizontal lines represent 95% CI. Each point represents estimated HR. The dashed vertical line indicates HR = 1. *: Wald-test p-value < 0.05.
Effect of Change of Rail Profile on Rolling Contact Fatigue at Wheel-Rail Interface
Creators: name: Teklebrhan Abebe
Publisher: name: Zenodo
Year: 2017

description: The general objective of this thesis is to analyze effect of change of radiuses curvature of Rail profile on contact fatigue stress using analytic and finite element software’s. The formulation in this study aims primarily at determination of stresses and fatigue parameters by varying contact area arising from variation in radiuses curvature of Rail profile. A change in radiuses curvature of Rail profile brings in a change in contact area and stresses. The theoretical models are based on the normal problem (Hertz theory) correspondingly, variations in the results in terms of principal stresses and fatigue parameters such as equivalent stresses, fatigue damage, and expected fatigue life with changes in radiuses curvature of Rail profile are obtained. Comparisons of different radiuses curvature of Rail profile are taken place. Better radiuses curvature of Rail profile is suggested. Results obtained are expected to help understand the rail wheel configuration dependence on the stress deformation pattern and fatigue parameters. This may help an appropriate selection of radiuses curvature of Rail profile in the optimization process.
Additional file 1 of Molecular intrinsic subtypes, genomic, and immune landscapes of BRCA-proficient but HRD-high ER-positive/HER2-negative early breast cancers
Creators: name: Ballot, Elise
name: Galland, Loïck
name: Mananet, Hugo
name: Boidot, Romain
name: Arnould, Laurent
name: Desmoulins, Isabelle
name: Mayeur, Didier
name: Kaderbhai, Courèche
name: Ilie, Silvia
name: Hennequin, Audrey
name: Bergeron, Anthony
name: Derangère, Valentin
name: Ghiringhelli, François
name: Truntzer, Caroline
name: Ladoire, Sylvain
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 1: Supplemental Table 1: Characteristics of patients under study, whole cohort and ER+/HER2- cohort.
Strong disorder renormalization group primer and the superfluid-insulator transition
Creators: name: Refael, Gil
name: Altman, Ehud
Publisher: name: arXiv
Year: 2014
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: This brief review introduces the method and application of real-space renormalization group to strongly disordered quantum systems. The focus is on recent applications of the strong disorder renormalization group to the physics of disordered-boson systems and the superfluid-insulator transition in one dimension. The fact that there is also a well understood weak disorder theory for this problem allows to illustrate what aspects of the physics change at strong disorder. In particular the strong disorder RG analysis suggests that the transitions at weak disorder and strong disorder belong to distinct universality classes, but this question remains under debate and is not fully resolved to date. Further applications of the strong disorder renormalization group to higher-dimensional Bose systems and to bosons coupled to dissipation are also briefly reviewed.
Additional file 2 of Molecular intrinsic subtypes, genomic, and immune landscapes of BRCA-proficient but HRD-high ER-positive/HER2-negative early breast cancers
Creators: name: Ballot, Elise
name: Galland, Loïck
name: Mananet, Hugo
name: Boidot, Romain
name: Arnould, Laurent
name: Desmoulins, Isabelle
name: Mayeur, Didier
name: Kaderbhai, Courèche
name: Ilie, Silvia
name: Hennequin, Audrey
name: Bergeron, Anthony
name: Derangère, Valentin
name: Ghiringhelli, François
name: Truntzer, Caroline
name: Ladoire, Sylvain
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 2: Supplemental figure 1 (S1): A–C. Violin plots representing the distribution of HRD score (A) and signature 3 (C) according to BRCA 1/2 mutational status in the whole cohort (n=928). B–D. Violin plots representing the distribution of HRD score (B) and signature 3 (D) according to PAM50 subtypes and Estrogen Receptor (ER) status considering the whole cohort (n=928). *: Wilcoxon p-value < 0.05.
Compiled Body of Works in Field Epidemiology
Creators: name: Dinku, Daniel Tamirat
Publisher: name: Zenodo
Year: 2017

description: This document contains a two years Field Epidemiology Training Program outputs which is equivalent with thesis to be submitted to graduate school of public health for partial fulfillment of master degree in Field Epidemiology. It includes reports of diseases outbreak investigations, public health surveillance data analysis, surveillance system evaluation, narrative summary of disaster situation report, manuscripts, abstracts, and training reports. Accordingly the document is organized to ten chapters; chapter one contains diseases outbreak investigations. I conducted two outbreak investigations as first Author and the investigations were conducted using case control study design. Investigation report contains abstract, introduction, methods, discussions, conclusion, recommendations, acknowledgement and references separately.
Additional file 3 of Molecular intrinsic subtypes, genomic, and immune landscapes of BRCA-proficient but HRD-high ER-positive/HER2-negative early breast cancers
Creators: name: Ballot, Elise
name: Galland, Loïck
name: Mananet, Hugo
name: Boidot, Romain
name: Arnould, Laurent
name: Desmoulins, Isabelle
name: Mayeur, Didier
name: Kaderbhai, Courèche
name: Ilie, Silvia
name: Hennequin, Audrey
name: Bergeron, Anthony
name: Derangère, Valentin
name: Ghiringhelli, François
name: Truntzer, Caroline
name: Ladoire, Sylvain
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 3: Supplemental figure 2 (S2): Distributions of HRD score and S3 proportion according to BRCA 1/2 mutational status considering the whole cohort (n = 928) or by breast cancer subtypes (standard pathological classification or PAM50 subtypes). A–B. Violin plots representing the distribution of HRD score (A) and signature 3 proportion (B) according to breast cancer standard pathological classification and BRCA 1/2 mutational status. *: Wilcoxon p-value < 0.05. C–D. Violin plots representing the distribution of HRD score (C) and signature 3 proportion (D) according to PAM50 subtypes and BRCA 1/2 mutational status. *: Wilcoxon p-value < 0.05. E–F. Violin plots representing the distribution of HRD (E) and signature 3 proportion (F) score according to BRCA 1/2 mutational status.
Investigation of the X-ray Emission of the Large Arcade Flare of 2 March 1993
Creators: name: Jakimiec, Jerzy
name: Tomczak, Michal
Publisher: name: arXiv
Year: 2013
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: A large arcade flare of 2 March 1993 has been investigated using X-ray observations recorded by the {\sl Yohkoh} and GOES satellites and the {\sl Compton Gamma Ray Observatory}. We analyzed quasi-periodicity of the hard-X-ray (HXR) pulses in the flare impulsive phase and found close similarity between the quasi-periodic sequence of the pulses with that observed in another large arcade flare of 2 November 1991. This similarity helped to explain the strong HXR pulses which were recorded at the end of the impulsive phase, as due to an inflow of dense plasma (coming from the chromospheric evaporation) into the acceleration volume inside the cusp. In HXR images a high flaring loop was seen with a triangular cusp structure at the top, where the electrons were efficiently accelerated. The sequence of HXR images allowed us to investigate complicated changes in the precipitation of the accelerated electrons toward the flare footpoints. We have shown that all these impulsive-phase observations can be easily explained in terms of the model of electron acceleration in oscillating magnetic traps located within the cusp structure. Some soft-X-ray (SXR) images were available for the late decay phase. They show a long arcade of SXR loops. Important information about the evolution of the flare during the slow decay phase is contained in the time variation of the temperature, $T(t)$, and emission measure, EM$(t)$. This information is the following: i) weak heating occurs during the slow decay phase and it slowly decreases; ii) the decrease in the heating determines slow and smooth decrease in EM; iii) the coupling between the heating and the amount of the hot plasma makes the flare evolve along a sequence of quasi-steady states during the slow decay phase (QSS evolution).
description: 21 pages, 12 figures, accepted for Solar Physics
Additional file 4 of Molecular intrinsic subtypes, genomic, and immune landscapes of BRCA-proficient but HRD-high ER-positive/HER2-negative early breast cancers
Creators: name: Ballot, Elise
name: Galland, Loïck
name: Mananet, Hugo
name: Boidot, Romain
name: Arnould, Laurent
name: Desmoulins, Isabelle
name: Mayeur, Didier
name: Kaderbhai, Courèche
name: Ilie, Silvia
name: Hennequin, Audrey
name: Bergeron, Anthony
name: Derangère, Valentin
name: Ghiringhelli, François
name: Truntzer, Caroline
name: Ladoire, Sylvain
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 4: Supplemental figure 3 (S3): A. Violin plots representing the distribution of HRD score according to PAM50 subtypes and BRCA 1/2 mutational status in ER+/HER2- tumors (n = 606). *: Wilcoxon p-value < 0.05. B. Violin plots representing the distribution of signature 3 proportion according to PAM50 subtypes and BRCA 1/2 mutational status in ER+/HER2- tumors (n=606). *: Wilcoxon p-value < 0.05.
Double Spin Asymmetries through QCD Instantons
Creators: name: Qian, Yachao
name: Zahed, Ismail
Publisher: name: arXiv
Year: 2014
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We revisit the large instanton contribution to the gluon Pauli form factor of the constituent quark noted by Kochelev. We check that it contributes sizably to the single spin asymmetry in polarized $p_\uparrow p \rightarrow πX$. We use it to predict a large double spin asymmetry in doubly polarized $p_\uparrow p_\uparrow\rightarrow ππX$.
description: 7 pages, 9 figures
Additional file 5 of Molecular intrinsic subtypes, genomic, and immune landscapes of BRCA-proficient but HRD-high ER-positive/HER2-negative early breast cancers
Creators: name: Ballot, Elise
name: Galland, Loïck
name: Mananet, Hugo
name: Boidot, Romain
name: Arnould, Laurent
name: Desmoulins, Isabelle
name: Mayeur, Didier
name: Kaderbhai, Courèche
name: Ilie, Silvia
name: Hennequin, Audrey
name: Bergeron, Anthony
name: Derangère, Valentin
name: Ghiringhelli, François
name: Truntzer, Caroline
name: Ladoire, Sylvain
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 5: Supplemental figure 4 (S4): A. Donuts representing the repartition of HRD score, PAM50 subtype, BRCA 1/2 mutations, Signature 3 proportion and ER status in the whole cohort (n=928). B–D. Diagrams representing the proportion of the different PAM50 subtypes among the BRCA 1/2 mutated (B), BRCA 1/2 WT HRD-high (C) and BRCA 1/2 WT HRD-low (D) populations in ER+/HER2- tumors (n = 606). *: Wilcoxon p-value < 0.05.
Additional file 6 of Molecular intrinsic subtypes, genomic, and immune landscapes of BRCA-proficient but HRD-high ER-positive/HER2-negative early breast cancers
Creators: name: Ballot, Elise
name: Galland, Loïck
name: Mananet, Hugo
name: Boidot, Romain
name: Arnould, Laurent
name: Desmoulins, Isabelle
name: Mayeur, Didier
name: Kaderbhai, Courèche
name: Ilie, Silvia
name: Hennequin, Audrey
name: Bergeron, Anthony
name: Derangère, Valentin
name: Ghiringhelli, François
name: Truntzer, Caroline
name: Ladoire, Sylvain
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 6: Supplemental figure 5 (S5): Association between HRD score and proliferation signature. A. Dot plot representing HRD score (Y-axis) given proliferation score (X-axis). B. Boxplots representing the distribution of proliferation score according to HRD status. *: Wilcoxon p-value < 0.05. C. Boxplots representing the distribution of proliferation score according to PAM50 and HRD status. *: Wilcoxon p-value < 0.05.
Additional file 7 of Molecular intrinsic subtypes, genomic, and immune landscapes of BRCA-proficient but HRD-high ER-positive/HER2-negative early breast cancers
Creators: name: Ballot, Elise
name: Galland, Loïck
name: Mananet, Hugo
name: Boidot, Romain
name: Arnould, Laurent
name: Desmoulins, Isabelle
name: Mayeur, Didier
name: Kaderbhai, Courèche
name: Ilie, Silvia
name: Hennequin, Audrey
name: Bergeron, Anthony
name: Derangère, Valentin
name: Ghiringhelli, François
name: Truntzer, Caroline
name: Ladoire, Sylvain
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 7: Supplemental figure 6 (S6): Association of genomic features quantifying tumor HRD and immunological characterization in ER+/HER2- tumors (n = 606). Violin plots representing the distribution of HRD, TAI, LST and LOH scores (A), signature 3 proportion (B), and immune signatures (C) according to HRD level and BRCA 1/2 mutational status in ER+/HER2- tumors. *: Wilcoxon p-value < 0.05.
Additional file 8 of Molecular intrinsic subtypes, genomic, and immune landscapes of BRCA-proficient but HRD-high ER-positive/HER2-negative early breast cancers
Creators: name: Ballot, Elise
name: Galland, Loïck
name: Mananet, Hugo
name: Boidot, Romain
name: Arnould, Laurent
name: Desmoulins, Isabelle
name: Mayeur, Didier
name: Kaderbhai, Courèche
name: Ilie, Silvia
name: Hennequin, Audrey
name: Bergeron, Anthony
name: Derangère, Valentin
name: Ghiringhelli, François
name: Truntzer, Caroline
name: Ladoire, Sylvain
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 8: Supplemental figure 7 (S7). Boxplots representing the distribution of BRCA2 gene expression according to HRD and BRCA 1/2 mutational status in ER+/HER2- tumors (n = 606). *: Wilcoxon p-value < 0.05.
Valley dynamics probed through charged and neutral exciton emission in monolayer WSe2
Creators: name: Wang, G.
name: Bouet, L.
name: Lagarde, D.
name: Vidal, M.
name: Balocchi, A.
name: Amand, T.
name: Marie, X.
name: Urbaszek, B.
Publisher: name: arXiv
Year: 2014
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Optical interband transitions in monolayer transition metal dichalcogenides such as WSe2 and MoS2 are governed by chiral selection rules. This allows efficient optical initialization of an electron in a specific K-valley in momentum space. Here we probe the valley dynamics in monolayer WSe2 by monitoring the emission and polarization dynamics of the well separated neutral excitons (bound electron hole pairs) and charged excitons (trions) in photoluminescence. The neutral exciton photoluminescence intensity decay time is about 4ps, whereas the trion emission occurs over several tens of ps. The trion polarization dynamics shows a partial, fast initial decay within tens of ps before reaching a stable polarization of about 20%, for which a typical valley polarization decay time larger than 1ns can be inferred. This is a clear signature of stable, optically initialized valley polarization.
description: 16 pages, 9 figures
Public Auditing and Data Dynamics for Storage Security in Cloud Computing
Creators: name: Gosavi, Hemalata A.
name: Umale, Manish R.
Publisher: name: arXiv
Year: 2014
Subjects: subject: Cryptography and Security (cs.CR)
subject: Distributed, Parallel, and Cluster Computing (cs.DC)
subject: FOS: Computer and information sciences

description: Cloud computing has been envisioned as the next generation architecture of IT Enterprise. Using Cloud Storage,users can remotely store their data and enjoy the on demand high quality applications and services from a shared pool of configurable computing resources, without the burden local copy data storage and maintenance. It moves the application of software data stored to the centralized large data centers, where the management of the data stored services may not be completely trusted. There are many new security challenges and the problems taken into account for ensuring the integrity of data storage in Cloud Computing. In particular, we consider the task of allowing a third party auditor (TPA) to perform verifies the integrity of the dynamic data stored in the cloud.
description: 04 pages, 8 figures, "Published with International Journal of Engineering Trends and Technology (IJETT)". arXiv admin note: text overlap with arXiv:1211.1457 by other authors
Additional file 9 of Molecular intrinsic subtypes, genomic, and immune landscapes of BRCA-proficient but HRD-high ER-positive/HER2-negative early breast cancers
Creators: name: Ballot, Elise
name: Galland, Loïck
name: Mananet, Hugo
name: Boidot, Romain
name: Arnould, Laurent
name: Desmoulins, Isabelle
name: Mayeur, Didier
name: Kaderbhai, Courèche
name: Ilie, Silvia
name: Hennequin, Audrey
name: Bergeron, Anthony
name: Derangère, Valentin
name: Ghiringhelli, François
name: Truntzer, Caroline
name: Ladoire, Sylvain
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 9: Supplemental figure 8 (S8): Boxplots representing the distribution of BRCA 1 (A, C, E, G) and BRCA 2 (B, D, F, H) gene expression according to HRD and BRCA 1/2 mutational status in ER+/HER2- tumors (n = 606) represented by PAM50 subtype. *: Wilcoxon p-value < 0.05.
Additional file 1 of Birth preparedness and complication readiness among husbands and its association with skilled birth attendance in southern Ethiopia
Creators: name: Yeshitila, Yordanos Gizachew
name: Memah, Peter
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases
subject: Computational Biology

description: Supplementary Material 1
Dynamical Chaotic Inflation in the Light of BICEP2
Creators: name: Harigaya, Keisuke
name: Ibe, Masahiro
name: Schmitz, Kai
name: Yanagida, Tsutomu T.
Publisher: name: arXiv
Year: 2014
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: The measurement of a large tensor-to-scalar ratio by the BICEP2 experiment, r = 0.20 (-0.05)(+0.07), severely restricts the landscape of viable inflationary models and shifts attention once more towards models featuring large inflaton field values. In this context, chaotic inflation based on a fractional power-law potential that is dynamically generated by the dynamics of a strongly coupled supersymmetric gauge theory appears to be particularly attractive. We revisit this class of inflation models and find that, in the light of the BICEP2 measurement, models with a non-minimal gauge group behind the dynamical model seem to be disfavored, while the model with the simplest group, i.e. SU(2), is consistent with all results. We also discuss how the dynamical model can be distinguished from the standard chaotic inflation model based on a quadratic inflaton potential.
description: 5 pages, 3 figures; v2: additional plots, more references, extended discussion on the effects of foreground subtraction
$ϕ^2$ Inflation at its Endpoint
Creators: name: Creminelli, Paolo
name: Nacir, Diana López
name: Simonović, Marko
name: Trevisan, Gabriele
name: Zaldarriaga, Matias
Publisher: name: arXiv
Year: 2014
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: In the simplest inflationary model $V=\frac12 m^2ϕ^2$, we provide a prediction accurate up to $1\%$ for the spectral index $n_s$ and the tensor-to-scalar ratio $r$ assuming instantaneous reheating and a standard thermal history: $n_s = 0.9668\pm0.0003$ and $r=0.131\pm 0.001$. This represents the simplest and most informative point in the $(n_s,r)$ plane. The result is independent of the details of reheating (or preheating) provided the conversion to radiation is sufficiently fast. A slower reheating or a modified post-inflationary evolution push towards smaller $n_s$ (and larger $r$), so that our prediction corresponds to the maximum $n_s$ (and minimum $r$) for the quadratic potential. We also derive similar results for a general $V \propto ϕ^p$ potential.
description: 5 pages, 3 figures
First results of the experiment to search for double beta decay of 106Cd with 106CdWO4 crystal scintillator in coincidence with four crystals HPGe detector
Creators: name: Tretyak, V. I.
name: Belli, P.
name: Bernabei, R.
name: Brudanin, V. B.
name: Cappella, F.
name: Caracciolo, V.
name: Cerulli, R.
name: Chernyak, D. M.
name: Danevich, F. A.
name: d'Angelo, S.
name: Incicchitti, A.
name: Laubenstein, M.
name: Mokina, V. M.
name: Poda, D. V.
name: Polischuk, O. G.
name: Podviyanuk, R. B.
name: Tupitsyna, I. A.
Publisher: name: arXiv
Year: 2013
Subjects: subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: An experiment to search for double beta processes in 106Cd by using cadmium tungstate crystal scintillator enriched in 106Cd (106CdWO4) in coincidence with the four crystals HPGe detector GeMulti is in progress at the STELLA facility of the Gran Sasso underground laboratory of INFN (Italy). The 106CdWO4 scintillator is viewed by a low-background photomultiplier tube through a lead tungstate crystal light-guide produced from deeply purified archaeological lead to suppress gamma quanta from the photomultiplier tube. Here we report the first results of the experiment after 3233 hours of the data taking. A few new improved limits on double beta processes in 106Cd are obtained, in particular T1/2(2nuECb+) > 8.4e20 yr at 90% C.L.
description: 4 p., contribution to Proc. of Int. Workshop on Radiopure Scintillators RPSCINT 2013, 17-20.09.2013, Kyiv, Ukraine; to be published in EPJ Web of Conferences
Magnetic Control of Ferroelectric Polarization in a Self-formed Single Magnetoelectric Domain of Multiferroic Ba3NbFe3Si2O14
Creators: name: Lee, Nara
name: Choi, Young Jai
name: Cheong, Sang-Wook
Publisher: name: arXiv
Year: 2014
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We have discovered strong magnetoelectric (ME) effects in the single chiral-helical magnetic state of single-crystalline langasite Ba3NbFe3Si2O14 that is crystallographically chiral. The ferroelectric polarization, predominantly aligned along the a axis below the Neel temperature of ~27 K, changes in a highly non-linear fashion in the presence of in-plane magnetic fields (H) perpendicular to the a axis (H//b*). This ME effect as well as smaller ME effects in other directions exhibit no poling dependence, suggesting the presence of a self-formed single ME domain. In addition, these ME effects accompany no-measurable hysteresis, which is crucial for many technological applications.
Additional file 1 of An analysis of past and future heatwaves based on a heat-associated mortality threshold: towards a heat health warning system
Creators: name: Kapwata, Thandi
name: Gebreslasie, Michael T.
name: Wright, Caradee Y.
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 1. Full names of codes used for districts.
Additional file 2 of An analysis of past and future heatwaves based on a heat-associated mortality threshold: towards a heat health warning system
Creators: name: Kapwata, Thandi
name: Gebreslasie, Michael T.
name: Wright, Caradee Y.
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 2. Heatwave characteristics from 2014 - 2019 as defined using threshold of 12.8 oC and duration of two days or more.
Additional file 3 of An analysis of past and future heatwaves based on a heat-associated mortality threshold: towards a heat health warning system
Creators: name: Kapwata, Thandi
name: Gebreslasie, Michael T.
name: Wright, Caradee Y.
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 3. Heatwave characteristics for period 2020 – 2039 using data simulated from RCP 4.5 projections.
Additional file 4 of An analysis of past and future heatwaves based on a heat-associated mortality threshold: towards a heat health warning system
Creators: name: Kapwata, Thandi
name: Gebreslasie, Michael T.
name: Wright, Caradee Y.
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 4. Heatwave characteristics for period 2020 – 2039 using data simulated from RCP 8.5 projections.
Vertex-Detector R&D for CLIC
Creators: name: Dannheim, Dominik
Publisher: name: arXiv
Year: 2013
Subjects: subject: Instrumentation and Detectors (physics.ins-det)
subject: High Energy Physics - Experiment (hep-ex)
subject: Accelerator Physics (physics.acc-ph)
subject: FOS: Physical sciences

description: A detector concept based on hybrid planar pixel-detector technology is under development for the CLIC vertex detector. It comprises fast, low-power and small-pitch readout ASICs implemented in 65 nm CMOS technology (CLICpix) coupled to ultra-thin sensors via low-mass interconnects. The power dissipation of the readout chips is reduced by means of power pulsing, allowing for a cooling system based on forced gas flow. In this paper the CLIC vertex-detector requirements are reviewed and the current status of R&D on sensors, readout and detector integration is presented.
description: 12 pages, 7 figures. Talk presented at the 13th Topical Seminar on Innovative Particle and Radiation Detectors (IPRD13), 7 - 10 October 2013, Siena, Italy
Additional file 1 of Revisiting revitalization: exploring how structural determinants moderate pathways between neighborhood change and health
Creators: name: Mui, Yeeli
name: Headrick, Gabby
name: Chien, Jessie
name: Pollack, Craig
name: Saleem, Haneefa T.
Publisher: name: figshare
Year: 2022
Subjects: subject: Sociology
subject: FOS: Sociology

description: Supplementary Material 1: Interview guide.
Blowup for $C^{2}$ Solutions of the N-dimensional Euler-Poisson Equations in Newtonian Cosmology
Creators: name: Yuen, Manwai
Publisher: name: arXiv
Year: 2014
Subjects: subject: Mathematical Physics (math-ph)
subject: Analysis of PDEs (math.AP)
subject: FOS: Physical sciences
subject: FOS: Mathematics
subject: 35B30, 35B44, 35Q35, 85A05, 85A40

description: Pressureless Euler-Poisson equations with attractive forces are standard models in Newtonian cosmology. In this article, we further develop the spectral dynamics method and apply a novel spectral-dynamics-integration method to study the blowup conditions for $C^{2}$ solutions with a bounded domain, $\left\Vert X(t)\right\Vert \leq X_{0}$, where $\left\Vert\cdot\right\Vert $ denotes the volume and $X_{0}$ is a positive constant. In particular, we show that if the cosmological constant $Λ
description: 10 Pages
Time resolved spectroscopy of SGR J1550-5418 bursts detected with Fermi/GBM
Creators: name: Younes, G.
name: Kouveliotou, C.
name: van der Horst, A. J.
name: Baring, M. G.
name: Granot, J.
name: Watts, A. L.
name: Bhat, P. N.
name: Collazzi, A.
name: Gehrels, N.
name: Gorgone, N.
name: Gogus, E.
name: Gruber, D.
name: Grunblatt, S.
name: Huppenkothen, D.
name: Kaneko, Y.
name: von Kienlin, A.
name: van der Klis, M.
name: Lin, L.
name: Mcenery, J.
name: van Putten, T.
name: Wijers, R. A. M. J.
Publisher: name: arXiv
Year: 2014
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: We report on time-resolved spectroscopy of the 63 brightest bursts of SGR J1550-5418, detected with Fermi/Gamma-ray Burst Monitor during its 2008-2009 intense bursting episode. We performed spectral analysis down to 4 ms time-scales, to characterize the spectral evolution of the bursts. Using a Comptonized model, we find that the peak energy, E_peak, anti-correlates with flux, while the low-energy photon index remains constant at -0.8 up to a flux limit F~10^-5 erg s-1 cm-2. Above this flux value the E_peak-flux correlation changes sign, and the index positively correlates with flux reaching 1 at the highest fluxes. Using a two black-body model, we find that the areas and fluxes of the two emitting regions correlate positively. Further, we study here for the first time, the evolution of the temperatures and areas as a function of flux. We find that the area-kT relation follows lines of constant luminosity at the lowest fluxes, R^2 \propto kT^-4, with a break at higher fluxes ($F>10^-5.5 erg s-1 cm-2). The area of the high-kT component increases with flux while its temperature decreases, which we interpret as due to an adiabatic cooling process. The area of the low-kT component, on the other hand, appears to saturate at the highest fluxes, towards R_max~30 km. Assuming that crust quakes are responsible for SGR bursts and considering R_max as the maximum radius of the emitting photon-pair plasma fireball, we relate this saturation radius to a minimum excitation radius of the magnetosphere, and put a lower limit on the internal magnetic field of SGR J1550-5418, B_int>~4.5x10^15 G.
description: 11 Pages, 6 Figures, accpeted for publication in ApJ
AGN Absorption Linked to Host Galaxies
Creators: name: Juneau, Stéphanie
Publisher: name: arXiv
Year: 2013
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: Multiwavelength identification of AGN is crucial not only to obtain a more complete census, but also to learn about the physical state of the nuclear activity (obscuration, efficiency, etc.). A panchromatic strategy plays an especially important role when the host galaxies are star-forming. Selecting far-Infrared galaxies at 0.3
description: Proceedings to be published for the IAU Symposium 304: Multiwavelength AGN Surveys and Studies. 4 pages. 2 figures. v2: Fixed a reference
Analyzing Dynamic Performance of Fright Rail Wagon Using Multibody Simulation (SIMPACK)
Creators: name: Henok Chala
Publisher: name: Zenodo
Year: 2015

description: Complex nonlinear interaction phenomena between rail wagon and track significantly influence the dynamic performance. Thus to alleviate the drawback arise due to poor vehicle riding behavior, predicting parameter that quantify performance and certifying the wagon have inevitable significant. The objective of the study is to model and simulate dynamic performance of X4K container carrier freight wagon with 48 DOF on selected Ethio- Djibouti 1.8 km horizontal track i.e. continuous straight, transitional and circular track using Simpack 9.6 having considered critical operation maneuver i.e. 100Km/hr maximum wagon running speed and 93 ton total load. The obtained simulation result indicated; maximum derailment coefficient (Y/Q=0.24098), maximum lateral track shift force ∑Fy=72,438.5N, ride quality index WZ(vertical)=2.5769 & WZ(lateral)=2.1786 and maximum wear index Γw=360.47N during curve negotiation have been found.