cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Supplemental Material: Visuospatial asymmetries arise from differences in the onset time of perceptual evidence accumulation
Creators: name: Newman, Daniel P.
name: Loughnane, Gerard M.
name: Kelly, Simon P.
name: O‘Connell, Redmond G
name: Bellgrove, Mark A
Publisher: name: figshare
Year: 2017
Subjects: subject: Neuroscience
subject: 170202 Decision Making
subject: FOS: Psychology
subject: 170101 Biological Psychology (Neuropsychology, Psychopharmacology, Physiological Psychology)

description: In accordance with past work, each of the neural signals in the current study was significantly correlated with absolute reaction-times (see Supplemental Figure 1). Note that none of the neural asymmetry predictors were highly correlated with each other (see Supplementary Figure 2).
Thesis_ Michelle Voelker
Creators: name: Voelker, Michelle
Publisher: name: figshare
Year: 2017
Subjects: subject: 91099 Manufacturing Engineering not elsewhere classified
subject: FOS: Electrical engineering, electronic engineering, information engineering

description: Thesis including three papers on cast metal surface inspection standards: Risk assessment for visual inspection, new digital standard, slicing method for determining underlying geometry, subsampling method for determining underlying geometry, proposal for automated inspection tool.
Field-tunable toroidal moment and anomalous Hall effect in noncollinear antiferromagnetic Weyl semimetal Co1/3TaS2
Creators: name: Park, Pyeongjae
name: Kang, Yoon-Gu
name: Kim, Junghyun
name: Lee, Ki Hoon
name: Noh, Han-Jin
name: Han, Myung Joon
name: Park, Je-Geun
Publisher: name: arXiv
Year: 2022
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Combining magnetism with band topology provides various novel phases that are otherwise impossible. Among several cases, noncollinear metallic antiferromagnets can reveal particularly rich topological physics due to their diverse magnetic ground states. However, there are only a few experimental studies due to the lack of suitable materials, especially with triangular lattice antiferromagnets. Here, we report that metallic triangular antiferromagnet Co1/3TaS2 exhibits a substantial anomalous Hall effect (AHE) related to its noncollinear magnetic order. Our first-principles calculations found that hourglass Weyl fermions from the non-symmorphic symmetry trigger AHE. We further show that AHE in Co1/3TaS2 can be characterized by the toroidal moment, a vortex-like multipole component that arises from a combination of chiral lattice and geometrical frustration. Finally, the unusual field-tunability of the toroidal moment puts Co1/3TaS2 as a rare example of a noncollinear metallic antiferromagnet filled with interesting magnetic and topological properties.
description: 20 pages, 4 figures, Accepted for publication in npj Quantum Materials
Recent Progress of Heterostructures Based on Two Dimensional Materials and Wide Bandgap Semiconductors
Creators: name: Liu, Ying
name: Fang, Yanjun
name: Yang, Deren
name: Pi, Xiaodong
name: Wang, Peijian
Publisher: name: arXiv
Year: 2022
Subjects: subject: Applied Physics (physics.app-ph)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Recent progress in the synthesis and assembly of two-dimensional (2D) materials has laid the foundation for various applications of atomically thin layer films. These 2D materials possess rich and diverse properties such as layer-dependent band gaps, interesting spin degrees of freedom, and variable crystal structures. They exhibit broad application prospects in micro-nano devices. In the meantime, the wide bandgap semiconductors (WBS) with an elevated breakdown voltage, high mobility, and high thermal conductivity have shown important applications in high-frequency microwave devices, high-temperature and high-power electronic devices. Beyond the study on single 2D materials or WBS materials, the multi-functional 2D/WBS heterostructures can promote the carrier transport at the interface, potentially providing novel physical phenomena and applications, and improving the performance of electronic and optoelectronic devices. In this review, we overview the advantages of the heterostructures of 2D materials and WBS materials, and introduce the construction methods of 2D/WBS heterostructures. Then, we present the diversity and recent progress in the applications of 2D/WBS heterostructures, including photodetectors, photocatalysis, sensors, and energy related devices. Finally, we put forward the current challenges of 2D/WBS heterostructures and propose the promising research directions in the future.
Where and how does a decay-index profile become saddle-like?
Creators: name: Luo, Runbin
name: Liu, Rui
Publisher: name: arXiv
Year: 2022
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Space Physics (physics.space-ph)
subject: FOS: Physical sciences

description: The decay index of solar magnetic fields is known as an important parameter in regulating solar eruptions from the standpoint of the torus instability. In particular, a saddle-like profile of decay index, which hosts a local torus-stable regime at higher altitudes than where the decay index first exceeds the instability threshold, is found to be associated with some confined or two-step eruptions. To understand the occurrence of such a profile, we employed dipoles to emulate different kinds of photospheric flux distributions. Corroborated by observations of representative active regions (ARs), our major results are: 1) in bipolar configurations the critical height increases away from the AR center along the polarity inversion line (PIL) and its average is roughly half of the centroid distance between opposite polarities; 2) in quadrupolar configurations saddle-like profiles appear above the PIL when the two dipoles oriented in the same direction are significantly more separated in this direction than in the perpendicular direction, and when the two dipoles are oriented differently or have unequal fluxes; 3) saddle-like profiles in quadrupolar configurations are associated with magnetic skeletons such as a null point or a hyperbolic flux tube, and the role of such profiles in eruptions is anticipated to be double-edged if magnetic reconnection is involved.
description: Accepted for publication in ApJ. 19 pages, 6 figures
A política dos memes e os memes da política: proposta metodológica de análise de conteúdo de memes dos debates eleitorais de 2014
Creators: name: Chagas, Viktor
name: Freire, Fernanda
name: Rios, Daniel
name: Dandara Magalhães
Publisher: name: figshare
Year: 2017
Subjects: subject: 200104 Media Studies
subject: FOS: Media and communications

description: Artigo publicado na Revista Intexto, n. 38, 2017.
Additional file 16: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content
Creators: name: Hossain, Zakir
name: Pillai, Bhinu
name: Gruber, Margaret
name: Yu, Min
name: Amyot, Lisa
name: Hannoufa, Abdelali
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Computational Biology

description: Table S10. Targeted transcription factors selected for lignin validation using Arabidopsis mutants. (DOCX 25Â kb)
Additional file 6: of Transcriptional development of phospholipid and lipoprotein metabolism in different intestinal regions of Atlantic salmon (Salmo salar) fry
Creators: name: Jin, Yang
name: Olsen, Rolf
name: Østensen, Mari-Ann
name: Gillard, Gareth
name: Korsvoll, Sven
name: Santi, Nina
name: Gjuvsland, Arne
name: Vik, Jon
name: Torgersen, Jacob
name: Sandve, Simen
name: Olsen, Yngvar
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Plant Biology
subject: Computational Biology

description: Table S1. Transcript per million (TPM) of all gene duplicates in phospholipid and lipoprotein synthesis pathways in stomach, pyloric caeca, and Hindgut of 0.16, 2.5 and 10 g salmon. (DOCX 32 kb)
Working Paper "A febre dos memes de política"
Creators: name: Chagas, Viktor
Publisher: name: figshare
Year: 2017
Subjects: subject: 200104 Media Studies
subject: FOS: Media and communications

description: Trabalho apresentado no 40º Encontro Anual da ANPOCS 2014 (24 a 28 de outubro de 2016), Caxambu, MG
Additional file 17: of Transcriptome profiling of Brassica napus stem sections in relation to differences in lignin content
Creators: name: Hossain, Zakir
name: Pillai, Bhinu
name: Gruber, Margaret
name: Yu, Min
name: Amyot, Lisa
name: Hannoufa, Abdelali
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Plant Biology
subject: Computational Biology

description: Table S11. Selected non-TF genes for lignin validation using Arabidopsis mutants. (DOCX 17Â kb)
Artigo "A política dos memes e os memes da política: proposta metodológica de análise de conteúdo de memes dos debates eleitorais de 2014"
Creators: name: Chagas, Viktor
name: Freire, Fernanda
name: Rios, Daniel
name: Dandara Magalhães
Publisher: name: figshare
Year: 2017
Subjects: subject: 200104 Media Studies
subject: FOS: Media and communications

description: As Eleições 2014 ficaram marcadas no imaginário popular brasileiro como as “eleições dos memes”. Sob o ponto de vista científico, porém, acredita-se que há ainda raras tentativas de compreender o que o fenômeno dos memes, no ambiente da internet, representa para a Comunicação Política. Este trabalho propõe-se a expor resultados preliminares de investigação sobre os usos e as apropriações de memes político-eleitorais. O principal objetivo é desenvolver, a partir de propostas anteriores, uma matriz taxonômica capaz de auxiliar pesquisadores interessados no tema a tratarem dos memes com maior objetividade. Para tanto, procurou-se realizar uma análise de conteúdo sobre memes que circularam durante os debates eleitorais presidenciais em 2014. Os resultados apontam para a necessidade de avaliarmos a produção de sentido de internautas sobre a cena política, percebendo os memes como expressão de uma opinião pública capaz de ler a performance dos candidatos através de comentários sociais nas mídias digitais.
Discussion on ‘Script for the playing of a 7″ phonograph record prepared for readthrough’ between Sarah Jones and Martin Westwood
Creators: name: Jones, Sarah
name: Westwood, Martin
Publisher: name: Taylor & Francis
Year: 2017
Subjects: subject: Biophysics
subject: Biochemistry
subject: Molecular Biology
subject: Neuroscience
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: This article records an email discussion between Martin Westwood and Sarah Jones the protagonist for which was the reading aloud of the ‘Script for the playing of a 7″ phonograph record prepared for readthrough’ at the symposium Headstone to Hard Drive 2 on 7 February 2015 at Central Saint Martins, London. The script that was read from precedes the print version of this article and online it is available as supplementary material. In identifying the potential of documentation, not in the realm of representation but as interception, the discussion posits how the protocols of a script maybe expanded as both a record and a proposition. It goes on to consider how the form of the riddle and riddling inhabits a double-mindedness of oral and aural register alongside the graphic, creating a doubled sense of hearing and seeing.
Additional file 7: of Transcriptional development of phospholipid and lipoprotein metabolism in different intestinal regions of Atlantic salmon (Salmo salar) fry
Creators: name: Jin, Yang
name: Olsen, Rolf
name: Østensen, Mari-Ann
name: Gillard, Gareth
name: Korsvoll, Sven
name: Santi, Nina
name: Gjuvsland, Arne
name: Vik, Jon
name: Torgersen, Jacob
name: Sandve, Simen
name: Olsen, Yngvar
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Plant Biology
subject: Computational Biology

description: Table S1. Log2 fold change (LogFC) and adjusted p value (q) of all gene duplicates in phospholipid and lipoprotein synthesis pathways in stomach, pyloric caeca and hindgut of 2.5 and 10 g salmon both compared to 0.16 g. (DOCX 34 kb)
MATLAB scripts for "Real-time THz imaging with a single-pixel detector"
Creators: name: Stantchev, Rayko
Publisher: name: figshare
Year: 2020
Subjects: subject: 20501 Classical and Physical Optics
subject: FOS: Physical sciences

description: Supplementary MATLAB scripts for [Rayko Stantchev, Xiao Yu, Thierry Blu, Emma Pickwell-MacPherson, "Real-time THz imaging with a single-pixel detector" yet to be published somewhere!]
MATLAB scripts for "Real-time THz imaging with a single-pixel detector"
Creators: name: Stantchev, Rayko
Publisher: name: figshare
Year: 2020
Subjects: subject: 20501 Classical and Physical Optics
subject: FOS: Physical sciences

description: Supplementary MATLAB scripts for [Rayko Stantchev, Xiao Yu, Thierry Blu, Emma Pickwell-MacPherson, "Real-time THz imaging with a single-pixel detector" yet to be published somewhere!]

Data is yet to be uploaded!!!
Emergence de la maladie de Chagas en Suisse: contexte et défis de santé publique
Creators: name: Jackson, Yves-Laurent Julien
Publisher: name: Université de Genève
Year: 2014
Subjects: info:eu-repo/classification/ddc/613
Maladie de Chagas
Maladie tropicale négligée
Migrants
Santé
Contexte socioéconomique
Epidémiologie

description: La maladie de Chagas est l'une des maladies tropicales les plus négligées. Cette infection parasitaire chronique, endémique en Amérique latine, affecte 8-10 millions de personnes. La fin du XXème siècle a vu la migration de plus de 15 millions de personnes à risque vers l'Europe, l'Amérique du Nord et l'Australie, transformant la maladie de Chagas en un problème de santé global. La Suisse, et Genève en particulier, abrite une importante communauté de migrants latinoaméricains. Cette thèse présente les investigations conduites à Genève qui illustrent les dimensions épidémiologiques et sociales de cette émergence et identifie le double fardeau de santé lié au phénomène de transition épidémiologique en cours dans les pays d'origine. Les données locales sont discutées en regard du contexte européen et illustrent les nouveaux défis de santé publique liés à l'hypermobilité des migrants.
Personalized General Internal Medicine:“general, yet personalized”
Creators: name: Guessous, Idris
Publisher: name: Université de Genève
Year: 2014
Subjects: subject: info:eu-repo/classification/ddc/613
subject: General internal medicine
subject: Personalized, individualized
subject: Genetics
subject: FOS: Biological sciences
subject: Shared-decision making
subject: Biological markers
subject: Spatial

description: While the completion of the Human Genome Project has amplified the opportunities of personalized medicine, personalized medicine is not limited to the use of genetic information. This thesis synthetizes the work we have done on different genetic and/or non‐genetic aproaches to personalize general internal medicine. To illustrate the concept of personalized general internal medicine, we use three specific domains commonly encountered in general internal medicine (osteoporosis, cardiovascular disease, and cancer), and present three different approaches to potentially personalized care (biological markers, genetic markers,and shared‐decision making). We discuss the perspectives of using geographic information system and network analysis to personalize general internal medicine. The limitations, challenges, and need to demonstrate the clinical utility of personalized general internal medicine are acknowledged. This thesis is based on work done across a wide spectrum of disease and traits, but with the core motivation of demonstrating that internal medicine is general, yet personalized!
Nanocellulose in green food packaging
Creators: name: Vilarinho, Fernanda
name: Silva, Ana Sanches
name: M. Fátima Vaz
name: Farinha, José Paulo
Publisher: name: Taylor & Francis
Year: 2017
Subjects: subject: Biophysics
subject: Medicine
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Developmental Biology
subject: 111714 Mental Health
subject: FOS: Health sciences

description: The development of packaging materials with new functionalities and lower environmental impact is now an urgent need of our society. On one hand, the shelf-life extension of packaged products can be an answer to the exponential increase of worldwide demand for food. On the other hand, uncertainty of crude oil prices and reserves has imposed the necessity to find raw materials to replace oil-derived polymers. Additionally, consumers' awareness toward environmental issues increasingly pushes industries to look with renewed interest to “green” solutions. In response to these issues, numerous polymers have been exploited to develop biodegradable food packaging materials. Although the use of biopolymers has been limited due to their poor mechanical and barrier properties, these can be enhanced by adding reinforcing nanosized components to form nanocomposites. Cellulose is probably the most used and well-known renewable and sustainable raw material. The mechanical properties, reinforcing capabilities, abundance, low density, and biodegradability of nanosized cellulose make it an ideal candidate for polymer nanocomposites processing. Here we review the potential applications of cellulose based nanocomposites in food packaging materials, highlighting the several types of biopolymers with nanocellulose fillers that have been used to form bio-nanocomposite materials. The trends in nanocellulose packaging applications are also addressed.
Natural background levels of chemical components in groundwater of Hutuo River catchment area, North China Plain
Creators: name: Zhang, Ying
name: Zongyu Chen
name: Jichao Sun
name: Jincui Wang
Publisher: name: Taylor & Francis
Year: 2017
Subjects: subject: Space Science
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Inorganic Chemistry

description: Natural background levels (NBLs) are commonly used to serve as references when assessing the contamination status of groundwater units. In this study, a methodology based on hydrogeochemistry and statistics was proposed to derive NBLs. A comprehensive understanding of the evolution of groundwater chemistry was acquired and the impact of natural and anthropogenic factors was analyzed based on a total of 93 groundwater samples. The hydrogeochemical plots and the Pau Ta criterion were applied to define the anomalies of the monitoring data by calculating the corresponding Mahalanobis distance. The NBLs were defined for the remaining groundwater samples of the three aquifers after excluding the anomalies with certain percentiles such as median and 90% percentile by means of cumulative frequency plots. Analysis of the hydrochemical data shows that for the aquifers studied, rock weathering dominates the evolution of groundwater chemistry in conjunction with cation exchange, and the dissolution of calcite and silicate weathering are responsible for the major chemical constituents of the groundwater. The NBLs established in the present study showed a difference in groundwater among three aquifers due to the distinct geological conditions. The background of nitrate in the groundwater of the unconfined aquifer was acquired according to the cumulative frequency plot. Deeper insight into the geochemical evolution of groundwater and the establishment of NBLs can be beneficial to improve groundwater management for sustainable development in rapidly urbanizing areas.
Fluorine Abundances in the Galactic Nuclear Star Cluster
Creators: name: Guerço, Rafael
name: Ramírez, Solange
name: Cunha, Katia
name: Smith, Verne V.
name: Prantzos, Nikos
name: Sellgren, Kris
name: Daflon, Simone
Publisher: name: arXiv
Year: 2022
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: Abundances of fluorine ($^{19}$F), as well as isotopic ratios of $^{16}$O/$^{17}$O, are derived in a sample of luminous young ($\sim$10$^{7}$--10$^{8}$ yrs) red giants in the Galactic center (with galactocentric distances ranging from 0.6--30 pc), using high-resolution infrared spectra and vibration-rotation lines of H$^{19}$F near $λ$2.3$μ$m. Five of the six red giants are members of the Nuclear star cluster that orbits the central supermassive black hole. Previous investigations of the chemical evolution of $^{19}$F in Galactic thin and thick disk stars have revealed that the nucleosynthetic origins of $^{19}$F may be rather complex, resulting from two, or more, astrophysical sites; fluorine abundances behave as a primary element with respect to Fe abundances for thick disk stars and as a secondary element in thin disk stars. The Galactic center red giants analyzed fall within the thin disk relation of F with Fe, having near-solar, to slightly larger, abundances of Fe ($$=+0.08$\pm$0.04), with a slight enhancement of the F/Fe abundance ratio ($$=+0.28$\pm$0.17). In terms of their F and Fe abundances, the Galactic center stars follow the thin disk population, which requires an efficient source of $^{19}$F that could be the winds from core-He burning Wolf Rayet stars, or thermally-pulsing AGB stars, or a combination of both. The observed increase of [F/Fe] with increasing [Fe/H] found in thin disk and Galactic center stars is not predicted by any published chemical evolution models that are discussed, thus a quantitative understanding of yields from the various possible sources of $^{19}$F remains unknown.
description: 19 pages, 5 figures, 4 tables
MATLAB scripts for "Real-time THz imaging with a single-pixel detector"
Creators: name: Stantchev, Rayko
Publisher: name: figshare
Year: 2020
Subjects: subject: 20501 Classical and Physical Optics
subject: FOS: Physical sciences

description: Supplementary MATLAB scripts for [Rayko Stantchev, Xiao Yu, Thierry Blu, Emma Pickwell-MacPherson, "Real-time THz imaging with a single-pixel detector" yet to be published somewhere!]

Data and scripts will be uploaded after publication!
To mesh or not to mesh: a review of pelvic organ reconstructive surgery
Creators: name: Daellenbach, Patrick Peter
Publisher: name: Université de Genève
Year: 2014
Subjects: info:eu-repo/classification/ddc/618
Pelvic organ prolapse
Pelvic floor reconstructive surgery
Mesh

description: Pelvic organ prolapse (POP) is a major health issue with a lifetime risk of undergoing at least one surgical intervention estimated at close to 10%. In the 1990's, the risk of reoperation after primary standard vaginal procedure was estimated to be as high as 30 to 50%. Based on this estimate of recurrence and in order to reduce the risk of relapse, gynecological surgeons started to use mesh implants in pelvic organ reconstructive surgery with the emergence of new complications, also implying reoperations. With the success of mesh in reducing the risk of recurrence for abdominal hernia (75% reduction), it was hypothesized that its use could proffer similar benefits in POP surgery. Recent studies have nevertheless shown that the risk of POP recurrence requiring reoperation is lower than previously estimated, being closer to 10% rather than 30%. The development of mesh surgery, under considerable pressure and incentives from the marketing industry, was tremendous during the past decade, and preceded any studies supporting its benefit for our patients. Nowadays, randomized trials comparing the use of mesh to native tissue repair in POP surgery have shown better anatomical outcomes, but similar functional outcomes, and that meshes are associated with more complications, in particular for transvaginal mesh implants. POP is not a life-threatening condition, but a functional problem that impairs quality of life for women. The old adage “primum non nocere” is particularly appropriate when dealing with this condition which is currently admitted to be physiological with aging when situated above the landmark of the hymen and requires no treatment when asymptomatic. Each patient and each situation must be treated specifically and the use of mesh needs to be selective and appropriate. Mesh implants are probably an important tool in pelvic reconstructive surgery, but the ideal implant has yet to be found, and the indications for its use still requires caution and discernment. This review explores the reasons behind the introduction of mesh augmentation in pelvic organ prolapse surgery, and aims to clarify the risks, benefits, and above all the recognized indications for its use.
Additional file 1 of Addressing critical knowledge and capacity gaps to sustain CRVS system development
Creators: name: Adair, Tim
name: Richards, Nicola
name: Avita Streatfield
name: Rajasekhar, Megha
name: McLaughlin, Deirdre
name: Lopez, Alan
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Science Policy

description: Additional file 1. CRVS Fellows, Data for Health Initiative.
The drastic effect of the impurity scattering on the electronic and superconducting properties of Cu-doped FeSe
Creators: name: Zajicek, Z.
name: Singh, S. J.
name: Jones, H.
name: Reiss, P.
name: Bristow, M.
name: Martin, A.
name: Gower, A.
name: McCollam, A.
name: Coldea, A. I.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Materials Science (cond-mat.mtrl-sci)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: Non-magnetic impurities in iron-based superconductors can provide an important tool to understand the pair symmetry and they can influence significantly the transport and the superconducting behaviour. Here, we present a study of the role of strong impurity potential in the Fe plane, induced by Cu substitution, on the electronic and superconducting properties of single crystals of FeSe. The addition of Cu quickly suppresses both the nematic and superconducting states, and increases the residual resistivity due to enhanced impurity scattering. Using magnetotransport data up to 35 T for a small amount of Cu impurity, we detect a significant reduction in the mobility of the charge carriers by a factor of ~3. While the electronic conduction is strongly disrupted by Cu substitution, we identify additional signatures of anisotropic scattering which manifest in linear resistivity at low temperatures and $H^{1.6}$ dependence of magnetoresistance. The suppression of superconductivity by Cu substitution is consistent with a sign-changing $s_{\pm}$ order parameter. Additionally, in the presence of compressive strain, the superconductivity is enhanced, similar to FeSe.
description: 16 pages, 9 figures, to appear in Physcial Review B (2022)
Monitoring total-body inflammation and damage in joints and entheses: the first follow-up study of whole-body magnetic resonance imaging in rheumatoid arthritis
Creators: name: MB Axelsen
name: I Eshed
name: M Østergaard
name: ML Hetland
name: JM Møller
name: DV Jensen
name: SB Krintel
name: MS Hansen
name: L Terslev
name: M Klarlund
name: RP Poggenborg
name: L Balding
name: SJ Pedersen
Publisher: name: Taylor & Francis
Year: 2019
Subjects: subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified

description: Objective: To investigate changes in whole-body magnetic resonance imaging (WBMRI) inflammatory and structural lesions in most joints and entheses in patients with rheumatoid arthritis (RA) treated with adalimumab. Methods: WBMRI was obtained at weeks 0, 6, 16, and 52 in a 52 week follow-up study of 37 RA patients starting treatment with adalimumab. Readability and reliability of WBMRI were investigated for 76 peripheral joints, 23 discovertebral units, the sacroiliac joints, and 33 entheses. Changes in WBMRI joint and entheses counts were investigated. Results: The readability of peripheral and axial joints was 82–100%, being less for elbows and small joints of the feet. For entheses, 72–100% were readable, except for entheses at the anterior chest wall, elbow, knee, and plantar fascia. The intrareader agreement was high for bone marrow oedema (BMO), bone erosion (80–100%), and enthesitis (77–100%), and slightly lower for synovitis and soft tissue inflammation (50–100%). All synovitis, BMO, and soft tissue inflammation counts decreased numerically during treatment. The 26-joint synovitis WBMRI count decreased significantly during the first 16 weeks for patients with a good European League Against Rheumatism (EULAR) response (from median 6 to 4, p Conclusions: WBMRI allows simultaneous monitoring of most axial and peripheral joints and entheses in RA patients and can visualize a decrease in inflammatory counts during treatment. This first WBMRI follow-up study of patients with RA encourages further investigation of the usefulness of WBMRI in RA.
Roles of human peripheral circadian system in metabolic diseases and cancer
Creators: name: Dibner, Charna
Publisher: name: Université de Genève
Year: 2014
Subjects: info:eu-repo/classification/ddc/616
Circadian clocks
Metabolism
Type 2 diabetes
Cancer
Bioluminescence

description: Circadian oscillation of biological processes has been described in most of the light-sensitive organisms. There is a growing body of evidence for connection between a number of metabolic pathologies and the circadian clockwork. We have set up the experimental system for long-term recording of circadian reporter oscillations in human primary cultured cells from different tissue types, and revealed the presence of a robust circadian oscillator in human pancreatic islets and islet cells using this approach. The prevalence of obesity and diabetes in modern society is taking on enormous proportions. It is therefore of major importance to identify the molecular basis of circadian rhythmicity in human peripheral tissues in physiological conditions, and upon obesity/T2D. Furthermore, we explored the molecular makeup of human thyroid clock, and its potential roles in thyroid malignancies. This approach might bring new insights into the role of circadian clocks in thyroid cancer, and have important clinical perspectives.
Nanocellulose: a benefit for green food packaging
Creators: name: Vilarinho, Fernanda
name: Sanches-Silva, Ana
name: M. Fátima Vaz
name: Farinha, José Paulo
Publisher: name: Taylor & Francis
Year: 2017
Subjects: subject: Biophysics
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Developmental Biology
subject: 111714 Mental Health
subject: FOS: Health sciences

description: The development of packaging materials with new functionalities and lower environmental impact is now an urgent requisite of our society. On one hand, the shelf-life extension of packaged products can be an answer to the exponential increase of worldwide demand for food. On the other hand, uncertainty of crude oil prices and reserves has imposed the necessity to find raw materials to replace oil-derived polymers. Additionally, consumers' awareness towards environmental issues increasingly pushes industries to look with renewed interest to “green” solutions. In response to these issues, numerous polymers have been exploited to develop biodegradable food packaging materials. Although the use of biopolymers has been limited due to their poor mechanical and barrier properties, these can be enhanced by adding reinforcing nano-sized components to form nanocomposites. Cellulose is probably the most used and well-known renewable and sustainable raw material. The mechanical properties, reinforcing capabilities, abundance, low density and biodegradability of nanosized cellulose make it an ideal candidate for polymer nanocomposites processing. Here we review the potential applications of cellulose based nanocomposites in food packaging materials, highlighting the several types of biopolymers with nanocellulose fillers that have been used to form bio-nanocomposite materials. The trends in nanocellulose packaging applications are also addressed.
Ray Tracing-Guided Design of Plenoptic Cameras
Creators: name: Michels, Tim
name: Koch, Reinhard
Publisher: name: arXiv
Year: 2022
Subjects: subject: Image and Video Processing (eess.IV)
subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Graphics (cs.GR)
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: FOS: Computer and information sciences

description: The design of a plenoptic camera requires the combination of two dissimilar optical systems, namely a main lens and an array of microlenses. And while the construction process of a conventional camera is mainly concerned with focusing the image onto a single plane, in the case of plenoptic cameras there can be additional requirements such as a predefined depth of field or a desired range of disparities in neighboring microlens images. Due to this complexity, the manual creation of multiple plenoptic camera setups is often a time-consuming task. In this work we assume a simulation framework as well as the main lens data given and present a method to calculate the remaining aperture, sensor and microlens array parameters under different sets of constraints. Our ray tracing-based approach is shown to result in models outperforming their pendants generated with the commonly used paraxial approximations in terms of image quality, while still meeting the desired constraints. Both the implementation and evaluation setup including 30 plenoptic camera designs are made publicly available.
description: 9 pages, 9 figures. Accepted at 3DV 2021. 2021 International Conference on 3D Vision (3DV). IEEE, 2021
Additional file 1: of Practice patterns and outcomes for patients with node-negative hormone receptor-positive breast cancer and intermediate 21-gene Recurrence Scores
Creators: name: Chen, Jonathan
name: Wu, Xian
name: Christos, Paul
name: Formenti, Silvia
name: Nagar, Himanshu
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Science Policy

description: Table S1. Chemotherapy receipt by age group, with age separated into three tiers using 35 and 50 years as clinically relevant thresholds. Chemotherapy receipt was significantly dependent on age group in this study (chi-square test, p < 0.001). (DOCX 15 kb)
Simulation of Plenoptic Cameras
Creators: name: Michels, Tim
name: Petersen, Arne
name: Palmieri, Luca
name: Koch, Reinhard
Publisher: name: arXiv
Year: 2022
Subjects: subject: Image and Video Processing (eess.IV)
subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Graphics (cs.GR)
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: FOS: Computer and information sciences

description: Plenoptic cameras enable the capturing of spatial as well as angular color information which can be used for various applications among which are image refocusing and depth calculations. However, these cameras are expensive and research in this area currently lacks data for ground truth comparisons. In this work we describe a flexible, easy-to-use Blender model for the different plenoptic camera types which is on the one hand able to provide the ground truth data for research and on the other hand allows an inexpensive assessment of the cameras usefulness for the desired applications. Furthermore we show that the rendering results exhibit the same image degradation effects as real cameras and make our simulation publicly available.
title: 01_1415
Creators: name: Wesley Baldwin, John
name: Baldwin, John W.
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2018
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: L'ensemble de ces notes ont été crée par John Baldwin lors d'une de ses premières périodes de résidence à Paris. Ces documents comprennent tous les magistri qu’il avait pu rencontrer dans ses sources. Aux XIIème et XIIIème siècles, les universités n'existant pas encore, le titre de magister s'il évoque certainement une compétence n'est pas rattaché de façon systématique au passage par les écoles. De surcroît, les magistris sont le plus souvent désignés par leur seul prénom. La lecture de ces données est donc difficile et suppose un long travail pour tenter d'identifier un individu auquel on pourrait rattacher plusieurs mentions. John Baldwin avait donc renoncé à utiliser ces données pour donner un prolongement à sa magnifique étude sur les gradués d'université et leur emploi par les Capétiens et les Plantagenêts. Néanmoins, il a conservé ces données et elles sont potentiellement très utile dans le cadre de Studium, comme le sont toutes les mentions dans les volumes des Fasti Ecclesiae Gallicanae de chanoines portant ce titre de magister sans autres précisions. L'ampleur des dépouillements rend ces données très utiles et nous devons une grande reconnaissance à John Baldwin pour avoir pris la peine de faire photocopier ses fiches et de nous les avoir transmises amicalement.
Les données ainsi que les images des fiches sont accessibles sur le site Internet à l'adresse suivante : http://studium-baldwin.lamop.fr/.
Les transcriptions des fiches ont été effectuées par des étudiants de Paris 1 Panthéon - Sorbonne mais elles n'ont pas été corrigées par la suite.
description: Relation: https://lamop.hypotheses.org/
Cholest-4-en-3-one attenuates TGF-β responsiveness by inducing TGF-β receptors degradation in Mv1Lu cells and colorectal adenocarcinoma cells
Creators: name: Chen, Chun-Lin
name: Deng-Chyang Wu
name: Min-Yun Liu
name: Lin, Ming-Wei
name: Hung-Tu Huang
name: Yaw-Bin Huang
name: Li-Chai Chen
name: Chen, Yu-Yu
name: Jih-Jung Chen
name: Yang, Pei-Hua
name: Kao, Yu-Chen
name: Chen, Pei-Yu
Publisher: name: Taylor & Francis
Year: 2017
Subjects: subject: Biophysics
subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: Marine Biology
subject: Cancer

description: Purpose: The transforming growth factor-beta (TGF-β) pathway is an important in the initiation and progression of cancer. Due to a strong association between an elevated colorectal cancer risk and increase fecal excretion of cholest-4-en-3-one, we aim to determine the effects of cholest-4-en-3-one on TGF-β signaling in the mink lung epithelial cells (Mv1Lu) and colorectal cancer cells (HT29) in vitro. Methods: The inhibitory effects of cholest-4-en-3-one on TGF-β-induced Smad signaling, cell growth inhibition, and the subcellular localization of TGF-β receptors were investigated in epithelial cells using a Western blot analysis, luciferase reporter assays, DNA synthesis assay, confocal microscopy, and subcellular fractionation. Results: Cholest-4-en-3-one attenuated TGF-β signaling in Mv1Lu cells and HT29 cells, as judged by a TGF-β-specific reporter gene assay of plasminogen activator inhibitor-1 (PAI-1), Smad2/3 phosphorylation and nuclear translocation. We also discovered that cholest-4-en-3-one suppresses TGF-β responsiveness by increasing lipid raft and/or caveolae accumulation of TGF-β receptors and facilitating rapid degradation of TGF-β and thus suppressing TGF-β-induced signaling. Conclusions: Our results suggest that cholest-4-en-3-one inhibits TGF-β signaling may be due, in part to the translocation of TGF-β receptor from non-lipid raft to lipid raft microdomain in plasma membranes. Our findings also implicate that cholest-4-en-3-one may be further explored for its potential role in colorectal cancer correlate to TGF-β deficiency.
Additional file 10: of Lymphocyte subset expression and serum concentrations of PD-1/PD-L1 in sepsis - pilot study
Creators: name: Wilson, Julie
name: Zhao, Yuan
name: Singer, Mervyn
name: Spencer, Jo
name: Shankar-Hari, Manu
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy

description: Figure S5. CD4+ T cell percentage positivity. Comparison of the expression levels as determined by percentage positivity of PD-1, PD-L1 and PD-L2 on CD4+ T cell subsets (CD27+ and CD27-) between patients with sepsis and healthy controls. (DOCX 465Â kb)
Additional file 3: of Practice patterns and outcomes for patients with node-negative hormone receptor-positive breast cancer and intermediate 21-gene Recurrence Scores
Creators: name: Chen, Jonathan
name: Wu, Xian
name: Christos, Paul
name: Formenti, Silvia
name: Nagar, Himanshu
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences

description: Table S2. Utilization of chemotherapy by year. Chemotherapy use has been decreasing steadily over the years (trend from 2010 to 2013, p < 0.001). (DOCX 14 kb)
MOESM1 of The positive role of vitronectin in radiation induced lung toxicity: the in vitro and in vivo mechanism study
Creators: name: Shen, Tian-Le
name: Liu, Mi-Na
name: Zhang, Qin
name: Feng, Wen
name: Yu, Wen
name: Fu, Xiao-Long
name: Cai, Xu-Wei
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Additional file 1: Table S1. Primer sequences for quantitative RT-PCR. Table S2. Primer sequences for construction of VTN-overexpressed and VTN-interfering vectors.
Monitoring total-body inflammation and damage in joints and entheses: the first follow-up study of whole-body magnetic resonance imaging in rheumatoid arthritis
Creators: name: MB Axelsen
name: I Eshed
name: M Østergaard
name: ML Hetland
name: JM Møller
name: DV Jensen
name: SB Krintel
name: MS Hansen
name: L Terslev
name: M Klarlund
name: RP Poggenborg
name: L Balding
name: SJ Pedersen
Publisher: name: Taylor & Francis
Year: 2017
Subjects: subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified

description: Objective: To investigate changes in whole-body magnetic resonance imaging (WBMRI) inflammatory and structural lesions in most joints and entheses in patients with rheumatoid arthritis (RA) treated with adalimumab. Methods: WBMRI was obtained at weeks 0, 6, 16, and 52 in a 52 week follow-up study of 37 RA patients starting treatment with adalimumab. Readability and reliability of WBMRI were investigated for 76 peripheral joints, 23 discovertebral units, the sacroiliac joints, and 33 entheses. Changes in WBMRI joint and entheses counts were investigated. Results: The readability of peripheral and axial joints was 82–100%, being less for elbows and small joints of the feet. For entheses, 72–100% were readable, except for entheses at the anterior chest wall, elbow, knee, and plantar fascia. The intrareader agreement was high for bone marrow oedema (BMO), bone erosion (80–100%), and enthesitis (77–100%), and slightly lower for synovitis and soft tissue inflammation (50–100%). All synovitis, BMO, and soft tissue inflammation counts decreased numerically during treatment. The 26-joint synovitis WBMRI count decreased significantly during the first 16 weeks for patients with a good European League Against Rheumatism (EULAR) response (from median 6 to 4, p Conclusions: WBMRI allows simultaneous monitoring of most axial and peripheral joints and entheses in RA patients and can visualize a decrease in inflammatory counts during treatment. This first WBMRI follow-up study of patients with RA encourages further investigation of the usefulness of WBMRI in RA.