cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 5: Figure S4. of A gene expression signature identifying transient DNMT1 depletion as a causal factor of cancer-germline gene activation in melanoma
Creators: name: Cannuyer, Julie
name: Tongelen, Aurélie Van
name: Loriot, Axelle
name: Smet, Charles De
Publisher: name: Figshare
Year: 2015
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Even after adjustment for cell proliferation, DNMT1 mRNA expression levels remain lower in CGAS-high melanoma samples. As DNMT1 shows a peak of mRNA expression during the S-phase of the cell cycle, reduced expression of this gene may reflect differences in cell proliferation rates rather than transcriptional down-regulation. To discriminate between these two possibilities, we resorted to a previously described strategy, wherein DNMT1 expression levels were reported to that of another gene (HIST2H4A) showing peak expression during the S-phase (Lee et al. Proc Natl Acad Sci USA, 1996, 93:10366). A) Cell cycle-dependent mRNA expression levels, as provided by Cyclebase, confirm peak expression of DNMT1 and HIST2H4A during the S-phase. B) DNMT1/HIST2H4A expression ratios were calculated (log2), and are represented in CGAS-low and CGAS-high melanoma samples (red bar at median). Statistical analysis was performed with the Mann–Whitney test. mRNA ratios remained lower in CGAS-high melanoma samples, thereby excluding differential proliferation rates as a cause of reduced DNMT1 mRNA expression. (PDF 3940 kb)
Additional file 10: Table S2. of A gene expression signature identifying transient DNMT1 depletion as a causal factor of cancer-germline gene activation in melanoma
Creators: name: Cannuyer, Julie
name: AurĂŠlie Van Tongelen
name: Loriot, Axelle
name: Smet, Charles De
Publisher: name: Figshare
Year: 2015
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: qPCR primers and probes. The sequences of PCR primers and Taqman probes (if used) are provided. (PDF 48 kb)
Trestonia capreola
Creators: name: De Barros, Rafael C.
name: Da Fonseca, Mailson G.
name: Vendramini, Vinicius E.
name: De Arvarenga Julio, Carlos E.
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Trestonia
Trestonia capreola

description: 128. Trestonia capreola (Germar, 1823)
Distribution: Brazil (Maranhão, Bahia, Minas Gerais, Espírito Santo, Rio de Janeiro, São Paulo, Paraná, Santa Catarina, Rio Grande do Sul), Paraguay, Argentina.
Material examined: BRAZIL, Paraná, Céu Azul, 700 m a.s.l., 25 o 04’09”S, 53°39’35”W. Understory, Light trap (Luiz de Queiroz), 1 male, 17.III.2015, R.C. Barros, J.P.B. Pine, B. Piraccini-Silva & D.R. Montanher leg. (MZUEL).
description: Published as part of De Barros, Rafael C., Da Fonseca, Mailson G., Vendramini, Vinicius E. & De Arvarenga Julio, Carlos E., 2019, Species of Lamiinae (Insecta, Coleoptera, Cerambycidae) from east Paraná State (Brazil), with new geographic records, pp. 179-204 in Zootaxa 4545 (2) on page 197, DOI: 10.11646/zootaxa.4545.2.2, http://zenodo.org/record/2618775
Additional file 3: Figure S2. of A gene expression signature identifying transient DNMT1 depletion as a causal factor of cancer-germline gene activation in melanoma
Creators: name: Cannuyer, Julie
name: Tongelen, Aurélie Van
name: Loriot, Axelle
name: Smet, Charles De
Publisher: name: Figshare
Year: 2015
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Overlap between ICCG genes and the set of genes that were down-regulated upon DNMT1 depletion in the Sen et al. study (ref. [28]). The Venn diagram shows exclusive overlap of the Sen set of genes with ICCG genes, but not with PCCG genes. The 21 genes common to ICCG genes and the Sen set of genes are listed. Reference ICCG genes, which were used in subsequent analyses are highlited in bold. The other reference ICCG gene, CDCA7L, is lacking in this list of common genes, because it was initially not represented on the microarray used by Sen et al. (PDF 3940 kb)
Additional file 4: Figure S3. of A gene expression signature identifying transient DNMT1 depletion as a causal factor of cancer-germline gene activation in melanoma
Creators: name: Cannuyer, Julie
name: Tongelen, Aurélie Van
name: Loriot, Axelle
name: Smet, Charles De
Publisher: name: Figshare
Year: 2015
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Exposure of HCT116 cells to DNMT1 inhibitor decitabine leads to down-regulation of cell mitosis/division-associated genes, and these genes show significant overlap with the group of ICCG genes. A) Genes showing transcriptonal up-regulation (fold change ≥4, adjusted p value ≤0.01, n = 165) or down-regulation (fold change ≤0.5, adjusted p value <0.01, n = 172) upon exposure to the DNMT1 inhibitor (GSE30985 dataset) were analyzed for enrichment of ontology terms. B) Overlap between down-regulated genes and ICCG genes was analyzed, and is expressed as observed/expected match ratio (log2). Fisher test was used for statiscal analysis: *p ≤ 0.05. C) Changes of expression observed in cells treated with the DNMT1 inhibitor are given for the 11 reference CG genes, and for ICCG genes (those that overlap with the down-regulated group of genes in the Sen et al. study; see Additional file 3: Figure S2). (PDF 3940 kb)
Quaesticulus Schaufuss 1861
Creators: name: M, José
name: Costas, Salgado
name: Moreda, Lucía Labrada
name: Luque, Carlos G.
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Leiodidae
Quaesticulus

description: Subgenus Quaesticulus Schaufuss, 1861
The following characters define the subgenus Quaesticulus: apices of elytra rounded, not divergent; sutural striae of elytra long and visible; metafemora of males without small tooth on the posterior margin (except Q. adnexus Schaufuss, 1861); internal sac of the aedeagus without robust sclerotized pieces and with a stylet lacking the basal plate; spermatheca with a short spermathecal duct and spermathecal membranous gland. This subgenus can be divided into two groups based on the length / width ratios of antennomeres 8 and 11. The species are distributed between the two groups as follows:
adnexus group (9 species): Quaestus adnexus (Schaufuss, 1861), Q. angustitarsis (Español, 1950), Q. autumnalis (Escalera, 1898), Q. canis (Salgado, 1992), Q. cisnerosii (Pérez-Arcas, 1872), Q. noltei (Coiffait, 1965), Q. pachecoi (Bolívar, 1915), Q. bustilloi Salgado & Fresneda, 2009 and Q. sharpi (Escalera, 1898).
filicornis group (3 species): Quaestus filicornis (Uhagón, 1881), Q. minos (Jeannel, 1909) and Q. pasensis sp. nov.
description: Published as part of M, José, Costas, Salgado, Moreda, Lucía Labrada & Luque, Carlos G., 2010, A new cave-dwelling species of Quaestus Schaufuss, 1861 from the Montes de Pas, Northern Spain (Coleoptera: Leiodidae: Leptodirini), pp. 25-34 in Zootaxa 2484 on page 26, DOI: 10.5281/zenodo.293973
Additional file 2: Table S1. of A gene expression signature identifying transient DNMT1 depletion as a causal factor of cancer-germline gene activation in melanoma
Creators: name: Cannuyer, Julie
name: Tongelen, Aurélie Van
name: Loriot, Axelle
name: Smet, Charles De
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Pharmacology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Cancer
subject: Computational Biology

description: List of 14 genes overexpressed in melanoma cell lines with a CGAS ≥7 (max 10 % FDR). List of 192 PCCG genes. List of 64 ICCG genes. (PDF 52 kb)
Walchia (Walchia) fragilis Schluger 1955
Creators: name: Nielsen, David H.
name: Robbins, Richard G.
name: Rueda, Leopoldo M.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Prostigmata
Trombiculidae
Walchia
Walchia fragilis

description: Walchia (Walchia) fragilis Schluger, 1955:
PAL
Walchia fragilis Schluger 1955
Gahrliepia (Walchia) fragilis, Chen & Hsu 1958 a
Walchia (Walchia) fragilis, Vercammen-Grandjean 1968c [ewingi group]
Walchia (Ventralia) fragilis, Wen 1999 a
description: Published as part of Nielsen, David H., Robbins, Richard G. & Rueda, Leopoldo M., 2021, Annotated world checklist of the Trombiculidae and Leeuwenhoekiidae (1758 - 2021) (Acari: Trombiculoidea), with notes on nomenclature, taxonomy, and distribution, pp. 1-243 in Zootaxa 4967 (1) on page 37, DOI: 10.11646/zootaxa.4967.1.1, http://zenodo.org/record/4745510
Additional file 8: Figure S7. of A gene expression signature identifying transient DNMT1 depletion as a causal factor of cancer-germline gene activation in melanoma
Creators: name: Cannuyer, Julie
name: Tongelen, Aurélie Van
name: Loriot, Axelle
name: Smet, Charles De
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Evidence of cell cycle-associated expression of representative ICCG and non-ICCG genes. A, Cyclebase data of cell cycle mRNA expression peaktime for the 4 representative ICCG genes and the 3 non-ICCG genes (KIF5B, PWP1 and CEP70). B, Relative mRNA levels of the genes were determined by RT-qPCR in BJ-hTERT fibroblasts cultured in the absence of serum during 7 days (− FBS d7). Values derived from 3 independent experiments and are expressed relative to the levels found in cells cultured in the presence of serum (+ FBS). **p <0.01, ***p <0.001, ****p <0.0001. (PDF 3940 kb)
Additional file 6: Figure S5. of A gene expression signature identifying transient DNMT1 depletion as a causal factor of cancer-germline gene activation in melanoma
Creators: name: Cannuyer, Julie
name: Tongelen, Aurélie Van
name: Loriot, Axelle
name: Smet, Charles De
Publisher: name: Figshare
Year: 2015
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: DNMT1 expression levels show no correlation with histological staging or patient survival in cutaneous melanoma. DNMT1 mRNA expression levels and clinical data were obtained from the TCGA dataset of cutaneous melanoma. A) The graphs represents relative DNMT1 mRNA expression (log2 scale) in melanoma tissue samples grouped according to Clark stage (number of samples in each group is indicated between parentheses). Statistical analysis with Anova and Bonferroni’s multiple comparison tests revealed no significant differences. B) Melanoma samples were separated into DNMT1-low (<0.7 fold mean probe intensity level, n = 57) and DNMT1-high (>1,3 fold mean probe intensity level, n = 48), and a Kaplan-Meier plot was obtained for the two corresponding groups of patients. Log rank test revealed no significant difference in survival between the two groups. (PDF 3940 kb)
Additional file 1: Figure S1. of A gene expression signature identifying transient DNMT1 depletion as a causal factor of cancer-germline gene activation in melanoma
Creators: name: Cannuyer, Julie
name: Tongelen, Aurélie Van
name: Loriot, Axelle
name: Smet, Charles De
Publisher: name: Figshare
Year: 2015
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Activation profile of other CG genes in the 45-MelCells dataset. Relative expression values (ratio to mean in all samples) were obtained for all X-linked CG genes listed in Simpson et al. (n = 41; ref. [11]), but excluding the 11 reference CG genes used for determination of the CGAS. The threshold for activation was defined as described in the materials and methods section. A majority of CG genes (n = 26, shown in the upper part) shows preferential activation in melanoma cell lines with a CGAS ≥7. (PDF 3940 kb)
Additional file 7: Figure S6. of A gene expression signature identifying transient DNMT1 depletion as a causal factor of cancer-germline gene activation in melanoma
Creators: name: Cannuyer, Julie
name: Tongelen, Aurélie Van
name: Loriot, Axelle
name: Smet, Charles De
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: Pharmacology
subject: Biotechnology
subject: Evolutionary Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Illustration of selected pTctrl and pTshDNMT1 clones derived from either HNEM-hTERT or BJ-hTERT cells. Light and fluorescence microscopy images of selected clones, either without (− doxy) or after (+ doxy) treatment with 1 μg/mL of doxycycline during 3 days. Selected clones show ~100 % tTFP positive cells after doxycycline exposure. (PDF 3940 kb)
Additional file 9: Figure S8. of A gene expression signature identifying transient DNMT1 depletion as a causal factor of cancer-germline gene activation in melanoma
Creators: name: Cannuyer, Julie
name: AurĂŠlie Van Tongelen
name: Loriot, Axelle
name: Smet, Charles De
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: shRNA-dependent inhibition of RB1, but not of p107 and p130, induces up-regulation of ICCG genes in human fibroblasts. Microarray expression data were extracted from the GSE19864 dataset (Chicas et al., Cancer Cell, 2010, 17:376). Fold change in expression is given for the 21 ICCG genes that overlapped with the Sen set of genes (see Additional file 3: Figure S2), and corresponds to the ratio (log2) of probe intensities between the indicated condition and control cells. (PDF 3940 kb)
Additional file 3: of Does migration â  pay offâ   for foreign-born migrant health workers? An exploratory analysis using the global WageIndicator dataset
Creators: name: Vries, Daniel De
name: Steinmetz, Stephanie
name: Tijdens, Kea
Publisher: name: Figshare
Year: 2016
Subjects: subject: Cell Biology
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy

description: Job titles classified as DOCTORS and job titles classified as NURSES with sample sizes. (DOCX 15 kb)
Additional file 1: of Cognitive biases associated with medical decisions: a systematic review
Creators: name: Saposnik, Gustavo
name: Redelmeier, Donald
name: Ruff, Christian
name: Tobler, Philippe
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Literature search and definitions of cognitive biases and personality traits. (PDF 101 kb)
Additional file 2: of Cognitive biases associated with medical decisions: a systematic review
Creators: name: Saposnik, Gustavo
name: Redelmeier, Donald
name: Ruff, Christian
name: Tobler, Philippe
Publisher: name: Figshare
Year: 2016
Subjects: subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Science Policy

description: Newcastle-Ottawa assessment tool and data quality. (PDF 76 kb)
Additional file 1: of Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism
Creators: name: Fekadu Yadetie
name: Bjørneklett, Silje
name: Garberg, Hilde
name: Oveland, Eystein
name: Berven, Frode
name: Goksøyr, Anders
name: Karlsen, Odd
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry

description: Figure S1. Body weight (A), condition factor (B) and liver-somatic index (C) in control (Ctr), 0.5 mg/kg BW MeHg (0.5 mg) and 2 mg/kg BW MeHg (2 mg) treated Atlantic cod; Figure S2. Histograms illustrating the label-free quantification data. Average abundance of each group minus respective median values was log2 -transformed and plotted for the control (black line), 0.5 mg/kg BW MeHg (red line) and 2 mg/kg BW MeHg (green line) group (Graph Pad Prism using auto bin range and width); Figure S3. SRM-quantification of differential expression for the proteins APOA4, represented by three peptides (A-C), and CATZ (D); Figure S4 - STRING protein-protein interaction network of differentially regulated proteins; Figure S5. Venn diagram showing shared annotations between proteomics and transcriptomics datasets; Figure S6. Networks of combined differentially regulated genes identified in transcriptomics and proteomics analyses in MeHg treated samples; Figure S7. Venn diagram showing shared annotations among liver proteomics, liver transcriptomics and brain proteomics datasets. (DOCX 11788 kb)
Phacellus cuvieri Buquet 1851
Creators: name: De Barros, Rafael C.
name: Da Fonseca, Mailson G.
name: Vendramini, Vinicius E.
name: De Arvarenga Julio, Carlos E.
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Phacellus
Phacellus cuvieri

description: 129. Phacellus cuvieri Buquet, 1851 (Fig. 37)
Distribution: Brazil (Minas Gerais, São Paulo).
Material examined: BRAZIL, Paraná, Foz do Iguaçu, Poço Preto Trail, 250 m a.s.l., 25°37'40"S 54°27'46"W. Collected with entomological net, 1 male, 31.X.2013, R.C. Barros leg. (MZUEL).
New state record for Paraná.
description: Published as part of De Barros, Rafael C., Da Fonseca, Mailson G., Vendramini, Vinicius E. & De Arvarenga Julio, Carlos E., 2019, Species of Lamiinae (Insecta, Coleoptera, Cerambycidae) from east Paraná State (Brazil), with new geographic records, pp. 179-204 in Zootaxa 4545 (2) on page 197, DOI: 10.11646/zootaxa.4545.2.2, http://zenodo.org/record/2618775
Additional file 3: of The bear circadian clock doesn’t ‘sleep’ during winter dormancy
Creators: name: Jansen, Heiko
name: Leise, Tanya
name: Stenhouse, Gordon
name: Pigeon, Karine
name: Kasworm, Wayne
name: Teisberg, Justin
name: Radandt, Thomas
name: Dallmann, Robert
name: Brown, Steven
name: Robbins, Charles
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Figure S1. A. Relationship between activity counts and light intensity for three denning wild bears. B. Relationship between time of light exposure and time of the largest activity bout in the same three bears shown in A. All times local. (PDF 109 kb)
Additional file 5: of The bear circadian clock doesn’t ‘sleep’ during winter dormancy
Creators: name: Jansen, Heiko
name: Leise, Tanya
name: Stenhouse, Gordon
name: Pigeon, Karine
name: Kasworm, Wayne
name: Teisberg, Justin
name: Radandt, Thomas
name: Dallmann, Robert
name: Brown, Steven
name: Robbins, Charles
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Hematology

description: Figure S3. Daily (24 h) activity profiles and scalograms of activity data from two denning pregnant wild bears (A – black bear; B – grizzly bear) before and after birth. Note the general reduction (and eventually loss) of rhythms after parturition. Activity in Panel B post-birth is artificially elevated due a voltage offset being introduced as the battery power was declining in this Actiwatch. (PDF 627 kb)
Additional file 2: of The bear circadian clock doesn’t ‘sleep’ during winter dormancy
Creators: name: Jansen, Heiko
name: Leise, Tanya
name: Stenhouse, Gordon
name: Pigeon, Karine
name: Kasworm, Wayne
name: Teisberg, Justin
name: Radandt, Thomas
name: Dallmann, Robert
name: Brown, Steven
name: Robbins, Charles
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases
subject: Plant Biology

description: Figure S4. Actograms (A) and scalograms (B,C) of a wild female grizzly bear during early denning (winter 2012-B) and mid-winter dormancy to den exit (2013-C) illustrating the lack of rhythmicity and subsequent re-appearance of locomotor rhythmicity prior to and at the time of den emergence (arrow). Day 71 corresponds to Nov. 8, 2012 in panel B. Day 1 corresponds to Jan. 1, 2013 in panel C. * - first day of noticeable entrainment (2012); Arrow – date of den exit based on GPS location fix. (PDF 630 kb)
Additional file 1: of The bear circadian clock doesn’t ‘sleep’ during winter dormancy
Creators: name: Jansen, Heiko
name: Leise, Tanya
name: Stenhouse, Gordon
name: Pigeon, Karine
name: Kasworm, Wayne
name: Teisberg, Justin
name: Radandt, Thomas
name: Dallmann, Robert
name: Brown, Steven
name: Robbins, Charles
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Pharmacology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Plant Biology

description: Table S1. Body weights (kg) of captive bears just prior to entering winter dormancy. (PDF 630 kb)
Polyrhaphis confusa Lane 1978
Creators: name: De Barros, Rafael C.
name: Da Fonseca, Mailson G.
name: Vendramini, Vinicius E.
name: De Arvarenga Julio, Carlos E.
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Polyrhaphis
Polyrhaphis confusa

description: 130. Polyrhaphis confusa Lane, 1978
Distribution: Brazil (Bahia, Minas Gerais, Espírito Santo, Rio de Janeiro, São Paulo, Paraná, Santa Catarina, Rio Grande do Sul).
Material examined: BRAZIL, Paraná, Foz do Iguaçu, Poço Preto Base, 250 m a.s.l., 25°37'40"S 54°27'46"W. Light trap (white sheet), 2 males, 2 females, 16.XII.2014, R.C. Barros, J.P.B. Pine, B. Piraccini-Silva & M.G. Fonseca leg. (MZUEL).
description: Published as part of De Barros, Rafael C., Da Fonseca, Mailson G., Vendramini, Vinicius E. & De Arvarenga Julio, Carlos E., 2019, Species of Lamiinae (Insecta, Coleoptera, Cerambycidae) from east Paraná State (Brazil), with new geographic records, pp. 179-204 in Zootaxa 4545 (2) on page 197, DOI: 10.11646/zootaxa.4545.2.2, http://zenodo.org/record/2618775
Additional file 4: of The bear circadian clock doesn’t ‘sleep’ during winter dormancy
Creators: name: Jansen, Heiko
name: Leise, Tanya
name: Stenhouse, Gordon
name: Pigeon, Karine
name: Kasworm, Wayne
name: Teisberg, Justin
name: Radandt, Thomas
name: Dallmann, Robert
name: Brown, Steven
name: Robbins, Charles
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Plant Biology

description: Figure S2. Frequency distribution of light exposures (minutes at >5lux) for three wild bears fitted with activity and light sensors. Data are grouped into 10 min bins. (PDF 631 kb)
Polyrhaphis grandini Buquet 1853
Creators: name: De Barros, Rafael C.
name: Da Fonseca, Mailson G.
name: Vendramini, Vinicius E.
name: De Arvarenga Julio, Carlos E.
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Polyrhaphis
Polyrhaphis grandini

description: 131. Polyrhaphis grandini Buquet, 1853
Distribution: Brazil (Goiás, Distrito Federal, Mato Grosso do Sul, Minas Gerais, Espírito Santo, Rio de Janeiro, São Paulo, Paraná, Santa Catarina, to Rio Grande do Sul).
Material examined: BRAZIL, Paraná, Foz do Iguaçu, Poço Preto Base, 250 m a.s.l., 25°37'40"S 54°27'46"W. Canopy, Light trap (Luiz de Queiroz), 1 female, 20.IV.2015, R.C. Barros & D.R. Montanher leg. (MZUEL).
description: Published as part of De Barros, Rafael C., Da Fonseca, Mailson G., Vendramini, Vinicius E. & De Arvarenga Julio, Carlos E., 2019, Species of Lamiinae (Insecta, Coleoptera, Cerambycidae) from east Paraná State (Brazil), with new geographic records, pp. 179-204 in Zootaxa 4545 (2) on page 197, DOI: 10.11646/zootaxa.4545.2.2, http://zenodo.org/record/2618775
Additional file 2: of Antidiabetic potential of two medicinal plants used in Gabonese folk medicine
Creators: name: Agnaniet, Huguette
name: Mbot, Elvis
name: Ousmane Keita
name: Jean-Alain Fehrentz
name: Ankli, Anita
name: Gallud, Audrey
name: Garcia, Marcel
name: Gary-Bobo, Magali
name: Lebibi, Jacques
name: Cresteil, Thierry
name: Menut, Chantal
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Plant Biology
subject: FOS: Biological sciences
subject: 60506 Virology

description: Diagram showing inhibition of α-glucosidase by extracts 14 and 15 at three concentrations. α-Glucosidase was incubated with extracts at a concentration of 1, 0.1 and 0.01 mg/mL. Remaining activities in the presence of extracts are expressed as a percentage of enzyme activity incubated in DMSO alone and are the mean ± SE of three separate determinations. 10 mM Acarbose was used as specific inhibitor of α-glucosidase. (PDF 30 kb)
Polyrhaphis spinipennis Laporte 1840
Creators: name: De Barros, Rafael C.
name: Da Fonseca, Mailson G.
name: Vendramini, Vinicius E.
name: De Arvarenga Julio, Carlos E.
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Polyrhaphis
Polyrhaphis spinipennis

description: 132. Polyrhaphis spinipennis Laporte, 1840
Distribution: Brazil (Goiás. Mato Grosso, Mato Grosso do Sul, Bahia, Minas Gerais, Espírito Santo, Rio de Janeiro, São Paulo, Paraná, Santa Catarina, Rio Grande do Sul), Paraguay, Argentina (Misiones), Uruguay.
Material examined: BRAZIL, Paraná, Foz do Iguaçu, Poço Preto Base, 250 m a.s.l., 25°37'40"S 54°27'46"W. Light trap (white sheet), 3 males, 16.XII.2014, R.C. Barros, J.P.B. Pine, B. Piraccini-Silva & M.G. Fonseca leg. (MZUEL).
description: Published as part of De Barros, Rafael C., Da Fonseca, Mailson G., Vendramini, Vinicius E. & De Arvarenga Julio, Carlos E., 2019, Species of Lamiinae (Insecta, Coleoptera, Cerambycidae) from east Paraná State (Brazil), with new geographic records, pp. 179-204 in Zootaxa 4545 (2) on page 203, DOI: 10.11646/zootaxa.4545.2.2, http://zenodo.org/record/2618775
Additional file 1: of Antidiabetic potential of two medicinal plants used in Gabonese folk medicine
Creators: name: Agnaniet, Huguette
name: Mbot, Elvis
name: Ousmane Keita
name: Jean-Alain Fehrentz
name: Ankli, Anita
name: Gallud, Audrey
name: Garcia, Marcel
name: Gary-Bobo, Magali
name: Lebibi, Jacques
name: Cresteil, Thierry
name: Menut, Chantal
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: Science Policy
subject: Plant Biology

description: HPTLC of extracts 10, 14 and 15 using DPPH derivatization reagent. The DPPH test shows some very prominent antioxidant zones. (PDF 17 kb)
Additional file 5: of Antidiabetic potential of two medicinal plants used in Gabonese folk medicine
Creators: name: Agnaniet, Huguette
name: Mbot, Elvis
name: Ousmane Keita
name: Jean-Alain Fehrentz
name: Ankli, Anita
name: Gallud, Audrey
name: Garcia, Marcel
name: Gary-Bobo, Magali
name: Lebibi, Jacques
name: Cresteil, Thierry
name: Menut, Chantal
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: Science Policy
subject: Hematology
subject: Plant Biology
subject: FOS: Biological sciences

description: Preparative HPLC fractionation curve of the raw extract from S. pobeguinii bark (E10). (PDF 189 kb)
MPEC 2024-L73 : 2024 LK1
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2024
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469
subject: 2024 LK1

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
Additional file 3: of Antidiabetic potential of two medicinal plants used in Gabonese folk medicine
Creators: name: Agnaniet, Huguette
name: Mbot, Elvis
name: Ousmane Keita
name: Jean-Alain Fehrentz
name: Ankli, Anita
name: Gallud, Audrey
name: Garcia, Marcel
name: Gary-Bobo, Magali
name: Lebibi, Jacques
name: Cresteil, Thierry
name: Menut, Chantal
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer
subject: Plant Biology
subject: FOS: Biological sciences
subject: 60506 Virology

description: Diagram showing inhibition of β-glucosidase by extracts 14 and 15 at three concentrations. β-Glucosidase was incubated with extracts at a concentration of 1, 0.1 and 0.01 mg/mL. Remaining activities in the presence of extracts are expressed as a percentage of enzyme activity incubated in DMSO alone and are the mean ± SE of three separate determinations. 1 μM Isofagomine was used as specific inhibitor of β-glucosidase. (PDF 30 kb)
Walchia (Walchia) fulleri Vercammen-Grandjean 1971
Creators: name: Nielsen, David H.
name: Robbins, Richard G.
name: Rueda, Leopoldo M.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Prostigmata
Trombiculidae
Walchia
Walchia fulleri

description: Walchia (Walchia) fulleri Vercammen-Grandjean, 1971c:
ORI
Walchia fulleri Vercammen-Grandjean, 1971c
Walchia (Disparunguia) fulleri, Wen 1999 a
Walchia (Walchia) fulleri, Stekolnikov 2021
description: Published as part of Nielsen, David H., Robbins, Richard G. & Rueda, Leopoldo M., 2021, Annotated world checklist of the Trombiculidae and Leeuwenhoekiidae (1758 - 2021) (Acari: Trombiculoidea), with notes on nomenclature, taxonomy, and distribution, pp. 1-243 in Zootaxa 4967 (1) on page 37, DOI: 10.11646/zootaxa.4967.1.1, http://zenodo.org/record/4745510
Additional file 4: of Antidiabetic potential of two medicinal plants used in Gabonese folk medicine
Creators: name: Agnaniet, Huguette
name: Mbot, Elvis
name: Ousmane Keita
name: Jean-Alain Fehrentz
name: Ankli, Anita
name: Gallud, Audrey
name: Garcia, Marcel
name: Gary-Bobo, Magali
name: Lebibi, Jacques
name: Cresteil, Thierry
name: Menut, Chantal
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: Science Policy
subject: Hematology
subject: Plant Biology
subject: FOS: Biological sciences

description: Preparative HPLC fractionation curve of the raw extract from N. diderrichii leaves (E14). (PDF 207 kb)
The Clinical Impact of Continuing to Prescribe Antiretroviral Therapy in Patients with Advanced AIDS Who Manifest No Virologic or Immunologic Benefit
Creators: Wohl, David A.
Kendall, Michelle A.
Feinberg, Judith
Alston-Smith, Beverly
Owens, Susan
Chafey, Suzette
Marco, Michael
Maxwell, Sharon
Benson, Constance
Keiser, Philip
van der Horst, Charles
Jacobson, Mark A.
Publisher: name: Columbia University
Year: 2013
Subjects: subject: HIV (Viruses)
subject: AIDS (Disease)
subject: Drugs
subject: T cells
subject: Immunology
subject: FOS: Clinical medicine

description: Introduction Despite the efficacy and tolerability of modern antiretroviral therapy (ART), many patients with advanced AIDS prescribed these regimens do not achieve viral suppression or immune reconstitution as a result of poor adherence, drug resistance, or both. The clinical outcomes of continued ART prescription for such patients have not been well characterized. Methods We examined the causes and predictors of all-cause mortality, AIDS-defining conditions, and serious non-AIDS-defining events among a cohort of participants in a clinical trial of pre-emptive therapy for CMV disease. We focused on participants who, despite ART had failed to achieve virologic suppression and substantive immune reconstitution. Results 233 ART-receiving participants entered with a median baseline CD4+ T cell count of 30/mm3 and plasma HIV RNA of 5 log10 copies/mL. During a median 96 weeks of follow-up, 24.0% died (a mortality rate of 10.7/100 patient-years); 27.5% reported a new AIDS-defining condition, and 22.3% a new serious non-AIDS event. Of the deaths, 42.8% were due to an AIDS-defining condition, 44.6% were due to a non-AIDS-defining condition, and 12.5% were of unknown etiology. Decreased risk of mortality was associated with baseline CD4+ T cell count ≥25/mm3 and lower baseline HIV RNA. Conclusions Among patients with advanced AIDS prescribed modern ART who achieve neither virologic suppression nor immune reconstitution, crude mortality percentages appear to be lower than reported in cohorts of patients studied a decade earlier. Also, in contrast to the era before modern ART became available, nearly half of the deaths in our modern-era study were caused by serious non-AIDS-defining events. Even among the most advanced AIDS patients who were not obtaining apparent immunologic and virologic benefit from ART, continued prescription of these medications appears to alter the natural history of AIDS—improving survival and shifting the causes of death from AIDS- to non-AIDS-defining conditions.
MPEC 2025-A164 : 2022 CQ1
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2025
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
Rhaphiptera pallens Gounelle 1908
Creators: name: De Barros, Rafael C.
name: Da Fonseca, Mailson G.
name: Vendramini, Vinicius E.
name: De Arvarenga Julio, Carlos E.
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Rhaphiptera
Rhaphiptera pallens

description: 133. Rhaphiptera pallens Gounelle, 1908 (Fig. 38)
Distribution: Brazil (Minas Gerais, Rio de Janeiro, São Paulo).
Material examined: BRAZIL, Paraná, Céu Azul, 700 m a.s.l., 25 o 04’09”S, 53°39’35”W. Canopy, Light trap (Luiz de Queiroz), 1 female, 14.X.2015, R.C. Barros, V.E. Vendramini & J.P.B. Pine leg. (MZUEL).
New state record for Paraná.
description: Published as part of De Barros, Rafael C., Da Fonseca, Mailson G., Vendramini, Vinicius E. & De Arvarenga Julio, Carlos E., 2019, Species of Lamiinae (Insecta, Coleoptera, Cerambycidae) from east Paraná State (Brazil), with new geographic records, pp. 179-204 in Zootaxa 4545 (2) on page 203, DOI: 10.11646/zootaxa.4545.2.2, http://zenodo.org/record/2618775
Additional file 2: of Influence of upper and temporal transconjunctival sclerocorneal incision on marginal reflex distance after cataract surgery
Creators: name: Tamaki, Rikiya
name: Gosho, Masahiko
name: Mizumoto, Kyoichi
name: Kato, Nahoko
name: Zako, Masahiro
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Histograms of the absolute MRD1 and the change from pre-operation in MRD1, We examined the distributions of the absolute MRD1 (left) and the change from pre-operation in MRD1 (right). According to the figure, the two measures were basically normally distributed (p = 0.07 and p = 0.66 by Shapiro-Wilk test, respectively).
MOESM1 of Probabilistic modelling of prospective environmental concentrations of gold nanoparticles from medical applications as a basis for risk assessment
Creators: name: Mahapatra, Indrani
name: Sun, Tian
name: Clark, Julian
name: Dobson, Peter
name: Hungerbuehler, Konrad
name: Owen, Richard
name: Nowack, Bernd
name: Lead, Jamie
Publisher: name: Figshare
Year: 2015
Subjects: subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences

description: Additional file 1. Supporting Information
Tapeina coronata subsp. integra Marinoni 1972
Creators: name: De Barros, Rafael C.
name: Da Fonseca, Mailson G.
name: Vendramini, Vinicius E.
name: De Arvarenga Julio, Carlos E.
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Tapeina
Tapeina coronata
Tapeina coronata integra marinoni, 1972

description: 134. Tapeina coronata integra Marinoni, 1972
Distribution: Brazil (Bahia, Minas Gerais, Espírito Santo, Rio de Janeiro, São Paulo, Paraná, Santa Catarina, Rio Grande do Sul), Paraguay, Argentina (Misiones).
Material examined: BRAZIL, Paraná, Céu Azul, 700 m a.s.l., 25 o 04’09”S, 53°39’35”W. Understory, Light trap (Luiz de Queiroz), 4 males, 14.X.2015, R.C. Barros, J.P.B. Pine & V.E. Vendramini leg. (MZUEL).
description: Published as part of De Barros, Rafael C., Da Fonseca, Mailson G., Vendramini, Vinicius E. & De Arvarenga Julio, Carlos E., 2019, Species of Lamiinae (Insecta, Coleoptera, Cerambycidae) from east Paraná State (Brazil), with new geographic records, pp. 179-204 in Zootaxa 4545 (2) on page 203, DOI: 10.11646/zootaxa.4545.2.2, http://zenodo.org/record/2618775
Additional file 1: of Changes in microbiota during experimental human Rhinovirus infection
Creators: name: J. Hofstra
name: S. Matamoros
name: M. Van De Pol
name: B. De Wever
name: M. Tanck
name: H. Wendt-Knol
name: M. Deijs
name: L. Van Der Hoek
name: K. Wolthers
name: R. Molenkamp
name: C. Visser
name: P. Sterk
name: R. Lutter
name: M. De Jong
Publisher: name: Figshare
Year: 2015
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Bacterial 16S rRNA Gene Sequencing. (DOCX 32 kb)
Ectatomma (Gnamptogenys) tornatum Roger
Creators: name: Forel, A.
Publisher: name: Zenodo
Year: 1905
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Formicidae
Ectatomma
Ectatomma tornatum

description: Ectatomma (Gnamptogenys) tornatum Roger.
- Caracas.
description: Published as part of Forel, A., 1905, Miscellanea myrmicologiques, II (1905)., pp. 155-185 in Annales de la Societe Entomologique de Belgique 49 on page 156
Additional file 7: of Protein relative abundance patterns associated with sucrose-induced dysbiosis are conserved across taxonomically diverse oral microcosm biofilm models of dental caries
Creators: name: Rudney, Joel
name: Pratik Jagtap
name: Reilly, Cavan
name: Ruoqiong Chen
name: Markowski, Todd
name: LeeAnn Higgins
name: Johnson, James
name: Griffin, Timothy
Publisher: name: Figshare
Year: 2015
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Computational Biology

description: Heat map of species-level MEGAN5 LCA assignments. The color key is on a logarithmic scale. The Bray-Curtis distance metric was used to generate the dendrograms. Each column represents a NS, or WS microcosm sample; labels provided for the columns are colored green for NS or red for WS. Each row represents one of the 303 LCA-assigned species. Row labels are not shown, since they would not be legible. Additional file 6 lists all species assignments.
Ectatomma (Acanthoponera) mucronatum Roger
Creators: name: Forel, A.
Publisher: name: Zenodo
Year: 1905
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Formicidae
Ectatomma
Ectatomma mucronatum

description: Ectatomma (Acanthoponera) mucronatum Roger.
- Vene- zuela.
description: Published as part of Forel, A., 1905, Miscellanea myrmicologiques, II (1905)., pp. 155-185 in Annales de la Societe Entomologique de Belgique 49 on page 156
Additional file 10: of Protein relative abundance patterns associated with sucrose-induced dysbiosis are conserved across taxonomically diverse oral microcosm biofilm models of dental caries
Creators: name: Rudney, Joel
name: Pratik Jagtap
name: Reilly, Cavan
name: Ruoqiong Chen
name: Markowski, Todd
name: LeeAnn Higgins
name: Johnson, James
name: Griffin, Timothy
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biophysics
subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology
subject: Computational Biology

description: Heat map of MEGAN5 SEED assignments. The color key is on a logarithmic scale. The Bray-Curtis distance metric was used to generate the dendrograms. Each column represents a NS, or WS microcosm sample; labels provided for the columns are colored green for NS or red for WS. Each row represents one of the 1969 SEED-assigned proteins. Row labels are not shown, since they would not be legible. Additional file 9 lists all protein assignments.