cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 3 of Association between the oxidative stress gene polymorphism and chronic obstructive pulmonary disease risk: a meta-analysis
Creators: name: Zhou, Ting
name: Zuo, Qiunan
name: Chen, Mengchun
name: Zhao, Yingying
name: Li, Xiaohui
name: Guo, Shujin
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 3.
Fully Nonlinear Singularly perturbed models with non-homogeneous degeneracy
Creators: name: Silva, João V.
name: Júnior, Elzon C.
name: Ricarte, Gleydson C.
Publisher: name: arXiv
Year: 2021
Subjects: subject: Analysis of PDEs (math.AP)
subject: FOS: Mathematics

description: In our work we study non-variational, nonlinear singularly perturbed elliptic models enjoying a double degeneracy character with prescribed boundary value in a domain. In such a scenario, we establish the existence of solutions. We also prove that solutions are locally (uniformly) Lipschitz continuous, and they grow in a linear fashion. Moreover, solutions and their free boundaries possess a sort of measure-theoretic and weak geometric properties. Moreover, for a restricted class of non-linearities, we prove the finiteness of the (N-1)-dimensional Hausdorff measure of level sets. We also address a complete analysis concerning the asymptotic limit as the singular parameter, which is related to one-phase solutions of inhomogeneous nonlinear free boundary problems in flame propagation and combustion theory.
sj-docx-1-anp-10.1177_00048674211068393 – Supplemental material for The impact of the COVID-19 pandemic on hospital-treated self-harm in Sydney (Australia)
Creators: name: Sperandei, Sandro
name: Page, Andrew
name: Bandara, Piumee
name: Reis, Arianne
name: Saheb, Rowena
name: Gaur, Pankaj
name: Munasinghe, Sithum
name: Worne, Kathryn
name: Fozzard, Carolyn
name: Brakoulias, Vlasios
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: 110319 Psychiatry (incl. Psychotherapy)
subject: FOS: Clinical medicine
subject: Neuroscience

description: Supplemental material, sj-docx-1-anp-10.1177_00048674211068393 for The impact of the COVID-19 pandemic on hospital-treated self-harm in Sydney (Australia) by Sandro Sperandei, Andrew Page, Piumee Bandara, Arianne Reis, Rowena Saheb, Pankaj Gaur, Sithum Munasinghe, Kathryn Worne, Carolyn Fozzard and Vlasios Brakoulias in Australian & New Zealand Journal of Psychiatry
Additional file 6 of Hypoxia-induced AFAP1L1 regulates pathological neovascularization via the YAP-DLL4-NOTCH axis
Creators: name: Ren, Jun-Song
name: Bai, Wen
name: Ding, Jing-Juan
name: Ge, Hui-Min
name: Wang, Su-Yu
name: Chen, Xi
name: Jiang, Qin
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Cancer

description: Additional file 6: Table S2. The target sequence of plasmid and constructed virus
Additional file 1 of Recognition of refractory Mycoplasma pneumoniae pneumonia among Myocoplasma pneumoniae pneumonia in hospitalized children: development and validation of a predictive nomogram model
Creators: name: Li, Meng
name: Wei, Xiang
name: Zhang, Shan-Shan
name: Li, Shan
name: Chen, Su-Hong
name: Shi, Su-Jie
name: Zhou, Shao-Hong
name: Sun, Da-Quan
name: Zhao, Qian-Ye
name: Xu, Yan
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1. TRIPOD checklist: prediction model development and validation.
Additional file 2 of Recognition of refractory Mycoplasma pneumoniae pneumonia among Myocoplasma pneumoniae pneumonia in hospitalized children: development and validation of a predictive nomogram model
Creators: name: Li, Meng
name: Wei, Xiang
name: Zhang, Shan-Shan
name: Li, Shan
name: Chen, Su-Hong
name: Shi, Su-Jie
name: Zhou, Shao-Hong
name: Sun, Da-Quan
name: Zhao, Qian-Ye
name: Xu, Yan
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 2. The Criteria of MPP.
Supplementary document for Josephson oscillations of edge quasi-solitons in a photonic-topological coupler - 5487315.pdf
Creators: name: Bazhan, Nataliia
name: Yakimenko, Aleksander
name: Malomed, Boris
Publisher: name: Optica Publishing Group
Year: 2021
Subjects: subject: 20503 Nonlinear Optics and Spectroscopy
subject: FOS: Physical sciences

description: Supplemental document.
sj-pdf-1-wso-10.1177_1747493021995271 - Supplemental material for Pre-stroke physical activity and admission stroke severity: A systematic review
Creators: name: Hung, Stanley H
name: Ebaid, Deena
name: Kramer, Sharon
name: Werden, Emilio
name: Baxter, Helen
name: Campbell, Bruce CV
name: Brodtmann, Amy
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: Cardiology
subject: Medicine
subject: 110904 Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine

description: Supplemental material, sj-pdf-1-wso-10.1177_1747493021995271 for Pre-stroke physical activity and admission stroke severity: A systematic review by Stanley H Hung, Deena Ebaid, Sharon Kramer, Emilio Werden, Helen Baxter, Bruce CV Campbell and Amy Brodtmann: the ATACH Trial Investigators and the SAMURAI Investigators in International Journal of Stroke
Poincaré series for surfaces with boundary
Creators: name: Chaubet, Yann
Publisher: name: arXiv
Year: 2021
Subjects: subject: Differential Geometry (math.DG)
subject: Dynamical Systems (math.DS)
subject: FOS: Mathematics
subject: 37C30, 53C22

description: We show that the Poincaré series counting orthogeodesics of a negatively curved surface with totally geodesic boundary extends meromorphically to the whole complex plane, as well as the series counting geodesic arcs linking two points; we also give their value at zero.
title: LBNL Open Power Data
Creators: name: Peisert, Sean; McParland, Chuck; Boverhof, Joshua; Gentz, Reinhard; Elbashandy, Abdelrahman; Gunter, Dan
Publisher: name: Lawrence Berkeley National Laboratory
Year: 2017
Subjects: energy conservation
energy use management

description: The dataset stored at https://powerdata-explore.lbl.gov is a set of power measurements and annotations, and an interface for exploring and downloading that data. The power measurements are collected by micro-phasor measurement units (µPMUs) [Powa, VMCMA14] and PQube3 power quality meters [Powb] manufactured by Power Standards Laboratory in
Alameda, CA and located at Lawrence Berkeley National Laboratory, as well as other sites.
This white paper describes the datasets, how to view and download the data and associated
metadata.
Additional file 3 of Recognition of refractory Mycoplasma pneumoniae pneumonia among Myocoplasma pneumoniae pneumonia in hospitalized children: development and validation of a predictive nomogram model
Creators: name: Li, Meng
name: Wei, Xiang
name: Zhang, Shan-Shan
name: Li, Shan
name: Chen, Su-Hong
name: Shi, Su-Jie
name: Zhou, Shao-Hong
name: Sun, Da-Quan
name: Zhao, Qian-Ye
name: Xu, Yan
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 3. R Software usage.
Additional file 4 of Recognition of refractory Mycoplasma pneumoniae pneumonia among Myocoplasma pneumoniae pneumonia in hospitalized children: development and validation of a predictive nomogram model
Creators: name: Li, Meng
name: Wei, Xiang
name: Zhang, Shan-Shan
name: Li, Shan
name: Chen, Su-Hong
name: Shi, Su-Jie
name: Zhou, Shao-Hong
name: Sun, Da-Quan
name: Zhao, Qian-Ye
name: Xu, Yan
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 4. R Software Pmsampasize usage.
sj-docx-1-jtr-10.1177_00472875211067548 – Supplemental material for The Matching Effect of Destinations’ Crisis Communication
Creators: name: Zhang, Jiangchi
name: Xie, Chaowu
name: Chen, Yanying
name: Dai, You-De
name: Yi-Jun, Wang
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 150310 Organisation and Management Theory
subject: FOS: Economics and business
subject: 150402 Hospitality Management

description: Supplemental material, sj-docx-1-jtr-10.1177_00472875211067548 for The Matching Effect of Destinations’ Crisis Communication by Jiangchi Zhang, Chaowu Xie, Yanying Chen, You-De Dai and Wang Yi-Jun in Journal of Travel Research
sj-pdf-1-cmx-10.1177_10775595211064207 – Supplemental Material for Child Maltreatment and Substance Use: A Behavior Genetic Analysis
Creators: name: Azimi, Andia M.
name: Connolly, Eric J.
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 160299 Criminology not elsewhere classified
subject: FOS: Law

description: Supplemental Material, sj-pdf-1-cmx-10.1177_10775595211064207 for Child Maltreatment and Substance Use: A Behavior Genetic Analysis by Andia M. Azimi1 and Eric J. Connolly in Child Maltreatment
Additional file 6 of GMP-grade human neural progenitors delivered subretinally protect vision in rat model of retinal degeneration and survive in minipigs
Creators: name: Lu, Bin
name: Avalos, Pablo
name: Svendsen, Soshana
name: Zhang, Changqing
name: Nocito, Laura
name: Jones, Melissa K.
name: Pieplow, Cosmo
name: Saylor, Joshua
name: Ghiam, Sean
name: Block, Amanda
name: Fernandez, Michael
name: Ljubimov, Alexander V.
name: Small, Kent
name: Liao, David
name: Svendsen, Clive N.
name: Wang, Shaomei
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Pharmacology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Hematology

description: Additional file 6: Fig S3. GLP study animal physiology. Body weight of male and female rats, as well as weight from brains, hearts, lungs, kidneys, lymph nodes and spleens from GLP study. There is no difference among cell-treated groups and vehicle control group.
Supplementary document for Bulk-edge correspondence and trapping at a non-Hermitian topological interface - 5557326.pdf
Creators: name: Longhi, Stefano
Publisher: name: Optica Publishing Group
Year: 2021
Subjects: subject: 20599 Optical Physics not elsewhere classified
subject: FOS: Physical sciences

description: (i) The proofs of theorems I and II stated in the main manuscript and (ii) the bulk-edge correspondence for the discrete photonic quantum walk interface.
Additional file 1 of Machine learning model for the prediction of gram-positive and gram-negative bacterial bloodstream infection based on routine laboratory parameters
Creators: name: Zhang, Fan
name: Wang, Hao
name: Liu, Liyu
name: Su, Teng
name: Ji, Bing
Publisher: name: figshare
Year: 2023
Subjects: subject: Space Science
subject: Medicine
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Table S1. Distribution of patients’ demographics characteristics and routine laboratory parameters in Qilu Hospital cohort.
Detecting Entanglement Generating Circuits in Cloud-Based Quantum Computing
Creators: name: Seong, Jiheon
name: Bae, Joonwoo
Publisher: name: arXiv
Year: 2021
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Entanglement, a direct consequence of elementary quantum gates such as controlled-NOT or Toffoli gates, is a key resource that leads to quantum advantages. In this work, we establish the framework of certifying entanglement generation in cloud-based quantum computing services. Namely, we present the construction of quantum circuits that certify entanglement generation in a circuit-based quantum computing model. The framework relaxes the assumption of the so-called qubit allocation, which is the step in a cloud service to relate physical qubits in hardware to a circuit proposed by a user. Consequently, the certification is valid no matter how unsuccessful qubit allocations may be in cloud computing or how untrustful the service may be in qubit allocations. We then demonstrate the certification of entanglement generation on two and three qubits in the IBMQ and IonQ services. Remarkably, entanglement generation is successfully certified in the IonQ service that does not provide a command of qubit allocations. The capabilities of entanglement generation in the circuits of IBMQ and IonQ are also quantified. We envisage that the proposed framework is applied when cloud-based quantum computing services are exploited for practical computation and information tasks, for which our results would find if it is possible to achieve quantum advantages.
description: 14 pages including 6 figures
Supplementary document for Bulk-edge correspondence and trapping at a non-Hermitian topological interface - 5557326.pdf
Creators: name: Longhi, Stefano
Publisher: name: Optica Publishing Group
Year: 2021
Subjects: subject: 20599 Optical Physics not elsewhere classified
subject: FOS: Physical sciences

description: The Supplemental document contains (i) the proofs of theorems I and II stated in the main manuscript, and (ii) the bulk-edge corrrespondence for the discrete photonic quantum walk interface.
Additional file 2 of Machine learning model for the prediction of gram-positive and gram-negative bacterial bloodstream infection based on routine laboratory parameters
Creators: name: Zhang, Fan
name: Wang, Hao
name: Liu, Liyu
name: Su, Teng
name: Ji, Bing
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 2: Figure S1. Interface of the prediction system based on the RF and DT models. A: Prediction interface based on Quick Prediction (for the DT model); B: prediction interface based on General Prediction (for the RF model).
Additional file 1 of Home-based cardio-oncology rehabilitation using a telerehabilitation platform in hematological cancer survivors: a feasibility study
Creators: name: Filakova, Katerina
name: Janikova, Andrea
name: Felsoci, Marian
name: Dosbaba, Filip
name: Su, Jing Jing
name: Pepera, Garyfallia
name: Batalik, Ladislav
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Science Policy

description: Supplementary Material 1
Additional file 2 of Transcriptomic analysis identifies CYP27A1 as a diagnostic marker for the prognosis and immunity in lung adenocarcinoma
Creators: name: Yin, Yi
name: He, Muqun
name: Huang, Yunjian
name: Xie, Xianhe
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Hematology
subject: Virology

description: Additional file 2: Table S2. Sequences of primer used quantitative real-time PCR. Figure S1. Validation of the prognostic value of CYP27A1 in independent datasets. Prognostic analysis of CYP27A1 in GSE41271 dataset (A), GSE11969 dataset (B), and Kaplan-Meier plotter (C). Figure S2. Validation of the diagnostic value of CYP27A1 in independent datasets. ROC curves of CYP27A1 in TNMplot.com analysis platform (A), GSE11969 dataset (B), and GSE30219 dataset (C). Figure S3. Immune cell infiltrates analysis of CYP27A1 in GSE11969 dataset. (A) The histogram presents the proportion of 24 immune cell types between the CYP27A1 low expression group and CYP27A1 high expression group. (B) The histogram presents the Stromal sore, Immune score, and ESTIMATE score between the CYP27A1 low expression group and CYP27A1 high expression group. (C) Correlation analysis between 24 immune cell types level and CYP27A1 expression in GSE11969 dataset.
The degree of ill-posedness of composite linear ill-posed problems with focus on the impact of the non-compact Hausdorff moment operator
Creators: name: Hofmann, Bernd
name: Mathé, Peter
Publisher: name: arXiv
Year: 2021
Subjects: subject: Numerical Analysis (math.NA)
subject: FOS: Mathematics
subject: 47A52, 47B06, 65J20, 44A60

description: We consider compact composite linear operators in Hilbert space, where the composition is given by some compact operator followed by some non-compact one possessing a non-closed range.
 Focus is on the impact of the non-compact factor on the overall behaviour of the decay rates of the singular values of the composition. Specifically, the composition of the compact integration operator with the non-compact Hausdorff moment operator is considered. We show that the singular values of the composition decay faster than the ones of the integration operator, providing a first example of this kind. However, there is a gap between available lower bounds for the decay rate and the obtained result. Therefore we conclude with a discussion.
description: 2 figures Added Remark 6, relating current problem to reconstruction of derivative from Legendre Polynomials
Additional file 2 of Impact of clonal hematopoiesis in COVID-19 patients at high risk for adverse clinical outcomes
Creators: name: Smith, Cathy
name: Burugula, Bala B.
name: Jones, Morgan A.
name: Li, Qing
name: Kitzman, Jacob O.
name: Wong, Terrence N.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Pharmacology
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 2: Figure S1. Demographics of hospitalized COVID-19 patients. Figure S2. Overall survival of COVID-19 patients from their day of initial hospitalization at Michigan Medicine. Figure S3. Elevation of systemic inflammatory markers and leukocytosis in hospitalized COVID-19 patients.
Additional file 1 of Classification of geologic materials used in the Sukhothai Historical Park of Thailand using a portable X-ray fluorescence analyzer and petrographic analysis
Creators: name: Singtuen, Vimoltip
name: Jansamut, Supaporn
name: Pongsaisri, Nucharee
name: Phajuy, Burapha
Publisher: name: figshare
Year: 2024
Subjects: subject: Geology
subject: FOS: Earth and related environmental sciences

description: Additional file 1: S1. Chemical analysis of phyllitic rocks in Sukhothai Historical Park and Wat Khao Noi old quarry.
Uniform Poincaré inequality in o-minimal structures
Creators: name: Valette, Anna
name: Valette, Guillaume
Publisher: name: arXiv
Year: 2021
Subjects: subject: Analysis of PDEs (math.AP)
subject: FOS: Mathematics
subject: 26D10, 32B20, 46E35

description: We first define the trace on a domain $Ω$ which is definable in an o-minimal structure. We then show that every function $u\in W^{1,p}(Ω)$ vanishing on the boundary in the trace sense satisfies Poincaré inequality. We finally show, given a definable family of domains $(Ω_t)_{t\in \mathbb{R}^k}$, that the constant of this inequality remains bounded, if so does the volume of $Ω_t$.
sj-docx-1-nvs-10.1177_08997640211065500 – Supplemental material for Capital Structure and Debt Maturity in Nonprofit Organizations
Creators: name: Garcia-Rodriguez, Inigo
name: Romero-Merino, M. Elena
name: Santamaria-Mariscal, Marcos
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 150310 Organisation and Management Theory
subject: FOS: Economics and business
subject: 160509 Public Administration
subject: FOS: Political science

description: Supplemental material, sj-docx-1-nvs-10.1177_08997640211065500 for Capital Structure and Debt Maturity in Nonprofit Organizations by Inigo Garcia-Rodriguez, M. Elena Romero-Merino and Marcos Santamaria-Mariscal in Nonprofit and Voluntary Sector Quarterly
Additional file 1 of Bronchial epithelial gene expression and interstitial lung abnormalities
Creators: name: Menon, Aravind A.
name: Lee, Minyi
name: Ke, Xu
name: Putman, Rachel K.
name: Hino, Takuya
name: Rose, Jonathan A.
name: Duan, Fenghai
name: Ash, Samuel Y.
name: Cho, Michael H.
name: O’Connor, George T.
name: Dupuis, Josée
name: Hatabu, Hiroto
name: Lenburg, Marc E.
name: Billatos, Ehab S.
name: Hunninghake, Gary M.
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 1: Table S1. Institutional Review Board committee names and project approval numbers for each center for the DECAMP Study.
sj-docx-2-han-10.1177_15589447211064358 – Supplemental material for Magnetic Resonance Angiography of the Hand Vasculature in Patients With Systemic Sclerosis and Systemic Lupus Erythematosus
Creators: name: Asadourian, Paul A.
name: Chen, Aaron Z.
name: Aristega Almeida, Bryan
name: Gordon, Jessica K.
name: Burge, Alissa J.
name: Fufa, Duretti T.
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: Medicine
subject: 110314 Orthopaedics
subject: FOS: Clinical medicine
subject: 110604 Sports Medicine
subject: FOS: Health sciences

description: Supplemental material, sj-docx-2-han-10.1177_15589447211064358 for Magnetic Resonance Angiography of the Hand Vasculature in Patients With Systemic Sclerosis and Systemic Lupus Erythematosus by Paul A. Asadourian, Aaron Z. Chen, Bryan Aristega Almeida, Jessica K. Gordon, Alissa J. Burge and Duretti T. Fufa in HAND
sj-docx-1-epm-10.1177_00131644211068801 – Supplemental material for Bias for Treatment Effect by Measurement Error in Pretest in ANCOVA Analysis
Creators: name: Miyazaki, Yasuo
name: Kamata, Akihito
name: Uekawa, Kazuaki
name: Sun, Yizhi
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 160807 Sociological Methodology and Research Methods
subject: FOS: Sociology
subject: Education
subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology

description: Supplemental material, sj-docx-1-epm-10.1177_00131644211068801 for Bias for Treatment Effect by Measurement Error in Pretest in ANCOVA Analysis by Yasuo Miyazaki, Akihito Kamata, Kazuaki Uekawa and Yizhi Sun in Educational and Psychological Measurement
Additional file 2 of Bronchial epithelial gene expression and interstitial lung abnormalities
Creators: name: Menon, Aravind A.
name: Lee, Minyi
name: Ke, Xu
name: Putman, Rachel K.
name: Hino, Takuya
name: Rose, Jonathan A.
name: Duan, Fenghai
name: Ash, Samuel Y.
name: Cho, Michael H.
name: O’Connor, George T.
name: Dupuis, Josée
name: Hatabu, Hiroto
name: Lenburg, Marc E.
name: Billatos, Ehab S.
name: Hunninghake, Gary M.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 2: Figure S1. Study design diagram.
sj-docx-1-msj-10.1177_13524585211069926 – Supplemental material for Gene–environment interactions increase the risk of pediatric-onset multiple sclerosis associated with ozone pollution
Creators: name: Ziaei, Amin
name: Lavery, Amy M
name: Shao, Xiaorong MA
name: Adams, Cameron
name: Casper, T Charles
name: Rose, John
name: Candee, Meghan
name: Weinstock-Guttman, Bianca
name: Aaen, Greg
name: Harris, Yolanda
name: Graves, Jennifer
name: Benson, Leslie
name: Gorman, Mark
name: Rensel, Mary
name: Mar, Soe
name: Lotze, Tim
name: Greenberg, Benjamin
name: Chitnis, Tanuja
name: Hart, Janace
name: Waldman, Amy T
name: Barcellos, Lisa F
name: Waubant, Emmanuelle
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 110904 Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: 111702 Aged Health Care
subject: FOS: Health sciences

description: Supplemental material, sj-docx-1-msj-10.1177_13524585211069926 for Gene–environment interactions increase the risk of pediatric-onset multiple sclerosis associated with ozone pollution by Amin Ziaei, Amy M Lavery, Xiaorong MA Shao, Cameron Adams, T Charles Casper, John Rose, Meghan Candee, Bianca Weinstock-Guttman, Greg Aaen, Yolanda Harris, Jennifer Graves, Leslie Benson, Mark Gorman, Mary Rensel, Soe Mar, Tim Lotze, Benjamin Greenberg, Tanuja Chitnis, Janace Hart, Amy T Waldman, Lisa F Barcellos and Emmanuelle Waubant in Multiple Sclerosis Journal
Additional file 1 of Clinical presentations and treatment outcomes of Hashimoto encephalopathy at Siriraj Hospital – Thailand’s largest national tertiary referral center
Creators: name: Dumrikarnlert, Chaisak
name: Thakolwiboon, Smathorn
name: Senanarong, Vorapun
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Neuroscience
subject: Immunology
subject: FOS: Clinical medicine
subject: Mental Health
subject: Hematology
subject: Computational Biology

description: Supplementary Material 1
History of North Dakota: Women's Hockey, Higher Ed & the UND Budget
Creators: name: Caraher, William
Publisher: name: unknown
Year: 2018
Subjects: subject: Education, Higher--Finance--Planning
subject: Educational change
subject: Education, Higher
subject: Higher education and state

description: This is a class on the recent budget cuts at the University of North Dakota. The class has four goals:

1. To become more familiar with the complexities of the modern university and UND, in particular.
2. To encourage critical thinking about the institutional structure of higher education in the U.S. in a historical
context and local context.
3. To understand the relationship between the institutional organization and the purpose of the university.
4. To produce a short guide to the UND budget for students that allows them to be more critical consumers
and participants in university life.
Multiplicity structure of the arc space of a fat point
Creators: name: Manssour, Rida Ait El
name: Pogudin, Gleb
Publisher: name: arXiv
Year: 2021
Subjects: subject: Algebraic Geometry (math.AG)
subject: Symbolic Computation (cs.SC)
subject: Commutative Algebra (math.AC)
subject: Combinatorics (math.CO)
subject: FOS: Mathematics
subject: FOS: Computer and information sciences
subject: 12H05, 13D40, 05A17

description: The equation $x^m = 0$ defines a fat point on a line. The algebra of regular functions on the arc space of this scheme is the quotient of $k[x, x', x^{(2)}, \ldots]$ by all differential consequences of $x^m = 0$. This infinite-dimensional algebra admits a natural filtration by finite dimensional algebras corresponding to the truncations of arcs. We show that the generating series for their dimensions equals $\frac{m}{1 - mt}$. We also determine the lexicographic initial ideal of the defining ideal of the arc space. These results are motivated by nonreduced version of the geometric motivic Poincaré series, multiplicities in differential algebra, and connections between arc spaces and the Rogers-Ramanujan identities. We also prove a recent conjecture put forth by Afsharijoo in the latter context.
Towards Interactive Reinforcement Learning with Intrinsic Feedback
Creators: name: Poole, Benjamin
name: Lee, Minwoo
Publisher: name: arXiv
Year: 2021
Subjects: subject: Artificial Intelligence (cs.AI)
subject: Human-Computer Interaction (cs.HC)
subject: Machine Learning (cs.LG)
subject: FOS: Computer and information sciences

description: Reinforcement learning (RL) and brain-computer interfaces (BCI) have experienced significant growth over the past decade. With rising interest in human-in-the-loop (HITL), incorporating human input with RL algorithms has given rise to the sub-field of interactive RL. Adjacently, the field of BCI has long been interested in extracting informative brain signals from neural activity for use in human-computer interactions. A key link between these fields lies in the interpretation of neural activity as feedback such that interactive RL approaches can be employed. We denote this new and emerging medium of feedback as intrinsic feedback. Despite intrinsic feedback's ability to be conveyed automatically and even unconsciously, proper exploration surrounding this key link has largely gone unaddressed by both communities. Thus, to help facilitate a deeper understanding and a more effective utilization, we provide a tutorial-style review covering the motivations, approaches, and open problems of intrinsic feedback and its foundational concepts.
description: Name change and vast rewrites of the paper
Additional file 1 of Comparative transcriptomic profiling of the two-stage response of rice to Xanthomonas oryzae pv. oryzicola interaction with two different pathogenic strains
Creators: name: Bi, Yunya
name: Yu, Yue
name: Mao, Shuaige
name: Wu, Tao
name: Wang, Tao
name: Zhou, Ying
name: Xie, Kabin
name: Zhang, Hua
name: Liu, Li
name: Chu, Zhaohui
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Supplementary Material 1. Additional file 1. Supplementary figures (Figure S1: GO analysis of the common DEGs at 12 h post inoculation with HGA4 and RS105; Figure S2: Histogram of the ratio of common DEGs at 3 dpi after inoculation with HGA4 and RS105; Figure S3: Expression levels determined by qRT‒PCR. Figure S4: Important KEGG pathways related to plant disease resistance mechanism.)
Additional file 4 of Bronchial epithelial gene expression and interstitial lung abnormalities
Creators: name: Menon, Aravind A.
name: Lee, Minyi
name: Ke, Xu
name: Putman, Rachel K.
name: Hino, Takuya
name: Rose, Jonathan A.
name: Duan, Fenghai
name: Ash, Samuel Y.
name: Cho, Michael H.
name: O’Connor, George T.
name: Dupuis, Josée
name: Hatabu, Hiroto
name: Lenburg, Marc E.
name: Billatos, Ehab S.
name: Hunninghake, Gary M.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 4: Table S3. List of differentially expressed genes that met p < 0.01 among those without probable or definite UIP pattern of ILA as compared to those without ILA.
Supplementary document for Self mode-locking in a high-power hybrid silicon nitride integrated laser - 5558141.pdf
Creators: name: Klaver, Yvan
name: Epping, Jörn
name: Roeloffzen, Chris
name: Marpaung, David
Publisher: name: Optica Publishing Group
Year: 2021
Subjects: Uncategorized

description: Expression for the transfer function of the cavity, tunability range of the MLL repetition rate, and extended figures of the phase response and time traces at all output ports.
How Big Data can expose a nascent White (House) Nationalism
Creators: name: Slodounik, Aaron
Publisher: name: London School of Economics US Centre
Year: 2017
Subjects: subject: History
subject: Digital humanities
subject: Mass media--Study and teaching
subject: United States
subject: Art
subject: Civil rights
subject: Area studies

description: This essay examines how implicit meaning within contemporary political discourse can be made explicit by applying insights from my dissertation on the nineteenth-century French Symbolist artist Paul Gauguin. Through pattern seeking and a creative application of the criteria of "actual malice" (established by the Supreme Court case New York Times v. Sullivan) we can begin to see instances of actual bias against identity groups protected by the Civil Rights Act of 1964. I argue that watchdog groups and other researchers will likely find a pattern of malice if they apply this method to Donald Trump's written and verbal statements made during the campaign.
Smooth actions of connected compact Lie groups with a free point are determined by two vector fields
Creators: name: Turiel, F. J.
name: Viruel, A.
Publisher: name: arXiv
Year: 2021
Subjects: subject: Differential Geometry (math.DG)
subject: FOS: Mathematics
subject: 57R25, 57S15

description: Consider a smooth action $\mathbf G\times M \rightarrow M$ of a compact connected Lie group $\mathbf G$ on a connected manifold $M$. Assume the existence of a point of $M$ whose isotropy group has a single element (free point). Then we prove that there exist two complete vector field $X,X_1$ such that their group of automorphisms equals $\mathbf G$ regarded as a group of diffeomorphisms of $M$ (the existence of a free point implies that the action of $\mathbf G$ is effective). Moreover, some examples of effective actions with no free point where this result fails are exhibited.
description: 30 pages, no figures. V2: Major revision. Exposition improved and added a new section presenting some open questions
On the ordinary Hecke orbit conjecture
Creators: name: van Hoften, Pol
Publisher: name: arXiv
Year: 2021
Subjects: subject: Number Theory (math.NT)
subject: Algebraic Geometry (math.AG)
subject: FOS: Mathematics
subject: Primary 11G18, Secondary 14G35

description: We prove the ordinary Hecke orbit conjecture for Shimura varieties of Hodge type at primes of good reduction. We make use of the global Serre-Tate coordinates of Chai as well as recent results of D'Addezio about the $p$-adic monodromy of isocrystals. The new ingredients in this paper are a general monodromy theorem for Hecke-stable subvarieties for Shimura varieties of Hodge type, and a rigidity result for the formal completions of ordinary Hecke orbits. Along the way we show that classical Serre--Tate coordinates can be described using unipotent formal groups, generalising results of Howe.
description: 44 pages; v3 is a minorly revised version of v1; main results unchanged
Additional file 1 of A method for generating synthetic longitudinal health data
Creators: name: Mosquera, Lucy
name: El Emam, Khaled
name: Ding, Lei
name: Sharma, Vishal
name: Zhang, Xue Hua
name: Kababji, Samer El
name: Carvalho, Chris
name: Hamilton, Brian
name: Palfrey, Dan
name: Kong, Linglong
name: Jiang, Bei
name: Eurich, Dean T.
Publisher: name: figshare
Year: 2024
Subjects: subject: Information Systems
subject: FOS: Computer and information sciences

description: Additional file 1: Appendix 1. Data Pre-Processing. Appendix 2. Random Cohort Utility Assessment. Appendix 3. Optimal Model Parameters.
sj-pdf-4-lup-10.1177_09612033211045056 – Supplemental Material for Premature rupture of membranes – A cause of foetal complications among lupus: A cohort study, systematic review and meta-analysis
Creators: name: dos Santos, Flávia Cunha
name: Ignacchiti, Marcela Lacerda
name: Rodrigues, Bruna
name: Velarde, Luis Guillermo
name: Levy, Roger Abramino
name: de Jesús, Guilherme Ramires
name: de Jesús, Nilson Ramires
name: de Andrade, Carlos Augusto Ferreira
name: Klumb, Evandro Mendes
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 111702 Aged Health Care
subject: FOS: Health sciences

description: Supplemental Material, sj-pdf-4-lup-10.1177_09612033211045056 for Premature rupture of membranes – A cause of foetal complications among lupus: A cohort study, systematic review and meta-analysis by Flávia Cunha dos Santos, Marcela Lacerda Ignacchiti, Bruna Rodrigues, Luis Guillermo Velarde, Roger Abramino Levy, Guilherme Ramires de Jesús, Nilson Ramires de Jesús, Carlos Augusto Ferreira de Andrade and Evandro Mendes Klumb in Lupus
Additional file 1 of Exploring patients’ perspectives: a mixed methods study on Outpatient Parenteral Antimicrobial Therapy (OPAT) experiences
Creators: name: Peter, Sophie
name: Oberröhrmann, Charlotte
name: Pfaff, Holger
name: Lehmann, Clara
name: Schmidt-Hellerau, Kirsten
name: Brandes, Vanessa
name: Leisse, Charlotte
name: Lindemann, Christoph Heinrich
name: Ihle, Peter
name: Küpper-Nybelen, Jutta
name: Hagemeier, Anna
name: Scholten, Nadine
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mental Health

description: Supplementary Material 1.
Additional file 2 of Exploring patients’ perspectives: a mixed methods study on Outpatient Parenteral Antimicrobial Therapy (OPAT) experiences
Creators: name: Peter, Sophie
name: Oberröhrmann, Charlotte
name: Pfaff, Holger
name: Lehmann, Clara
name: Schmidt-Hellerau, Kirsten
name: Brandes, Vanessa
name: Leisse, Charlotte
name: Lindemann, Christoph Heinrich
name: Ihle, Peter
name: Küpper-Nybelen, Jutta
name: Hagemeier, Anna
name: Scholten, Nadine
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mental Health

description: Supplementary Material 2.
Spatio-temporally graded causality: a model
Creators: name: Jura, Bartosz
Publisher: name: arXiv
Year: 2022
Subjects: subject: Neurons and Cognition (q-bio.NC)
subject: Mathematical Physics (math-ph)
subject: History and Philosophy of Physics (physics.hist-ph)
subject: FOS: Biological sciences
subject: FOS: Physical sciences

description: In this paper we consider a claim that in the natural world there is no fact of the matter about the spatio-temporal separation of events. In order to make sense of such a notion and construct useful models of the world, it is proposed to use elements of a non-classical logic. Specifically, a model is proposed here, according to which causality can be considered to be spatio-temporally graded. It is outlined how this can be described using the formalism of fuzzy sets theory, with the degree of causality varying between 1, that is no separation between causes and effects, and 0, that is perfect separation between causes and their effects as in classical 'billiard balls' models of physical systems, namely such based on the notion of ideal mathematical point. Our model posits that subjective moments of time are like fuzzy sets, with their extension determined by local degrees of causality, resulting from information integration processes extended gradually in space and time. This, we argue, is how a notion of causality could be, to a certain degree, spared and reconciled with a variant of Bergsonian duration theory as formulated in the theory of continuous change. Relation of the proposed viewpoint to other theories, as well as possible solutions it suggests to various problems, in particular the measurement problem, are also discussed.
description: 7 pages, 1 figure; added references, extended discussion; rephrased abstract, added brief summary section
Robust phase retrieval with complexity-guidance for coherent X-ray imaging
Creators: name: Butola, Mansi
name: Rajora, Sunaina
name: Khare, Kedar
Publisher: name: arXiv
Year: 2022
Subjects: subject: Image and Video Processing (eess.IV)
subject: Medical Physics (physics.med-ph)
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: FOS: Physical sciences

description: Reconstruction of a stable and reliable solution from noisy incomplete Fourier intensity data recorded in a coherent X-ray imaging (CXI) experiment is a challenging problem. The Relaxed Averaged Alternating Reflections (RAAR) algorithm that is concluded with a number of Error Reduction (ER) iterations is a popular choice. The RAAR-ER algorithm is usually employed for several hundreds of times starting with independent random guesses to obtain trial solutions that are then averaged to obtain the phase retrieval transfer function (PRTF). In this paper, we examine the phase retrieval solution obtained using the RAAR-ER methodology from perspective of the complexity parameter that was introduced by us in recent works. We observe that a single run of the RAAR-ER algorithm produces a solution with higher complexity compared to what is expected based on the complexity parameter as manifested by spurious high frequency grainy artifacts in the solution that do not seem to go away completely even after a number of trial solutions are averaged. We then describe a CG-RAAR (Complexity Guided RAAR) phase retrieval method that can effectively address this inconsistency problem and provides artifact-free solutions. The CG-RAAR methodology is first illustrated with simulated unblocked noisy Fourier intensity data and later applied to centrally-blocked noisy cyanobacterium data which is available from the CXIDB database. Our simulation and experimental results using CG-RAAR suggest two important improvements over the popular RAAR-ER algorithm. The CG-RAAR solutions after the averaging procedure is more reliable in the sense that it contains smallest features consistent with the resolution estimated by the PRTF curve. Secondly, since the single run of the CG-RAAR solution does not have grainy artifacts, the number of trial solutions needed for the averaging process is reduced.
Additional file 1 of e-Consent in UK academic-led clinical trials: current practice, challenges and the need for more evidence
Creators: name: Mitchell, E. J.
name: Appelbe, D.
name: Bravery, A.
name: Culliford, L.
name: Evans, H.
name: Farrin, A. J.
name: Gillies, K.
name: Hood, K.
name: Love, S. B.
name: Sydes, M. R.
name: Williamson, P. R.
name: Wakefield, N.
Publisher: name: figshare
Year: 2024
Subjects: Medicine
Pharmacology
Biotechnology
Cancer
Science Policy

description: Additional file 1. Survey questionnaire.
Klein bottles in lens spaces
Creators: name: Geiges, Hansjörg
name: Thies, Norman
Publisher: name: arXiv
Year: 2022
Subjects: subject: Geometric Topology (math.GT)
subject: FOS: Mathematics
subject: 57R40, 57K30, 57M99

description: Bredon and Wood have given a complete answer to the embeddability question for nonorientable surfaces in lens spaces. They formulate their result in terms of a recursive formula that determines, for a given lens space, the minimal genus of embeddable nonorientable surfaces. Here we give a direct proof that, amongst lens spaces as target manifolds, the Klein bottle embeds into $L(4n,2n\pm 1)$ only. We describe four explicit realisations of these embeddings.
description: 14 pages, 8 figures; v2: minor changes, one figure added
Additional file 2 of e-Consent in UK academic-led clinical trials: current practice, challenges and the need for more evidence
Creators: name: Mitchell, E. J.
name: Appelbe, D.
name: Bravery, A.
name: Culliford, L.
name: Evans, H.
name: Farrin, A. J.
name: Gillies, K.
name: Hood, K.
name: Love, S. B.
name: Sydes, M. R.
name: Williamson, P. R.
name: Wakefield, N.
Publisher: name: figshare
Year: 2024
Subjects: Medicine
Pharmacology
Biotechnology
Cancer
Science Policy

description: Additional file 2. Existing guidance.
Additional file 1 of Cholesterol mediates the effects of single and multiple environmental phenols in urine on obesity
Creators: name: Yu, Ting
name: Zhang, Yuqing
name: Yuan, Jiali
name: Zhang, Yue
name: Li, Jing
name: Huang, Zhenyao
Publisher: name: figshare
Year: 2024
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: Computational Biology

description: Supplementary Material 1
title: Allocative Efficiency and the Productivity Slowdown
title: Allocative Efficiency and Aggregate Productivity Growth in Canada and the United States
titleType: AlternativeTitle
Creators: name: Shao, Lin
name: Tang, Rongsheng
Publisher: name: Bank of Canada
Year: 2021

description: This paper evaluates the contribution of cross-sector allocative efficiency to the productivity slowdown in the US during the 1970s and 2000s. We extend the framework of Oberfield (2013) to derive sufficient statistics for allocative efficiency and decompose aggregate productivity growth in a multi-sector economy with or without input-output linkages. We find that approximately two-thirds of the productivity slowdown can be explained by the lack of improvement in allocative efficiency. Furthermore, data shows that increased sector-level volatility is associated with the deterioration of allocative efficiency.
description: Dans cette étude, nous évaluons dans quelle mesure l’efficience allocative intersectorielle contribue au ralentissement de la productivité aux États-Unis durant les années 1970 et 2000. Nous enrichissons le cadre conçu par Oberfield (2013) pour établir des statistiques suffisantes concernant l’efficience allocative et décomposer la croissance de la productivité globale dans une économie multisectorielle comportant ou non des liens entre les intrants et les extrants. Nous constatons qu’environ les deux tiers du ralentissement de la productivité découlent de l’absence de gain d’efficience allocative. De plus, les données indiquent qu’une volatilité sectorielle accrue est associée à la détérioration de l’efficience allocative.
sj-docx-1-jre-10.1177_15562646211007216 - Supplemental material for A Little Goes a Long Way: Adapting an Ethics Training Program to Work for Smaller Universities
Creators: name: Stenmark, Cheryl K.
name: Miller, Robert
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 160807 Sociological Methodology and Research Methods
subject: FOS: Sociology

description: Supplemental material, sj-docx-1-jre-10.1177_15562646211007216 for A Little Goes a Long Way: Adapting an Ethics Training Program to Work for Smaller Universities by Cheryl K. Stenmark and Robert Miller in Journal of Empirical Research on Human Research Ethics
sj-docx-1-ets-10.1177_00472395211023383 - Supplemental material for Feedback From Medical and Biology Students on Distance Learning: Focus on a Useful Interactive Software, Wooclap®
Creators: name: Marin, Julie
name: Brichler, Ségolène
name: Lecuyer, Hervé
name: Carbonnelle, Etienne
name: Lescat, Mathilde
Publisher: name: SAGE Journals
Year: 2022
Subjects: Education

description: Supplemental material, sj-docx-1-ets-10.1177_00472395211023383 for Feedback From Medical and Biology Students on Distance Learning: Focus on a Useful Interactive Software, Wooclap® by Julie Marin, Ségolène Brichler, Hervé Lecuyer, Etienne Carbonnelle and Mathilde Lescat in Journal of Educational Technology Systems
Additional file 4 of Genome-wide mapping of signatures of selection using a high-density array identified candidate genes for growth traits and local adaptation in chickens
Creators: name: Mastrangelo, Salvatore
name: Ben-Jemaa, Slim
name: Perini, Francesco
name: Cendron, Filippo
name: Biscarini, Filippo
name: Lasagna, Emiliano
name: Penasa, Mauro
name: Cassandro, Martino
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 4: Table S1. Genomic regions identified using Rsb statistic in the comparisons between the heavy vs light and Northern vs Southern Italy chicken populations.