cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Self-diffusion coefficient of bulk and confined water: a critical review of classical molecular simulation studies
Creators: name: Tsimpanogiannis, Ioannis N.
name: Othonas A. Moultos
name: Franco, Luís F. M.
name: Spera, Marcelle B. De M.
name: Máté Erdős
name: Economou, Ioannis G.
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Biophysics
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy

description: We present a detailed overview of classical molecular simulation studies examining the self-diffusion coefficient of water. The self-diffusion coefficient is directly associated with the calculations of tracer or mutual diffusion coefficient of mixtures and, therefore, is a fundamental transport property, essential for an accurate description of mass transfer processes in biological, geological (i.e. energy or environmentally related), and chemical systems. In the current review we explore two distinct research areas. Namely, we discuss the self-diffusion of water in the bulk phase and under confinement. Different aspects that affect the diffusion process, including the molecular models, the system-size effects, the temperature and pressure conditions and the type of confinement are discussed. Finally, possible directions for future research are outlined.
A Sustainable Collaboratory for Coastal Resilience Research
Creators: name: Shuai Yuan
name: Q. Jim Chen
name: Rion Dooley
name: Brandt, Steven R.
name: Zhu, Ling
Publisher: name: figshare
Year: 2018
Subjects: subject: 90599 Civil Engineering not elsewhere classified
subject: FOS: Civil engineering
subject: Computer Engineering

description: Our goal is to create a cloud-ready repository of open-source coastal modeling tools which enable scientists and engineers to use high performance computers to study a variety of physical and ecological processes. The system we are building leverages Jupyter notebooks, Docker, Singularity, and the Agave Platform to create a platform for running jobs and analyzing data in a way that is (1) intuitive, (2) repeatable, (3) and collaborative. The paper describes the methodology to integrate the four technologies into the system that serves the coastal resilience research collaboratory. Two commonly used open-source numer- ical models are used to demonstrate the utility of the system. Simulation results of ocean waves generated by Hurricane Issac (2012) and coastal wave evolution are presented as an illustration. The sustainability of the collaboratory is discussed in detail.
Quantum supergroups and topological invariants of three - manifolds
Creators: name: Zhang, R. B.
Publisher: name: arXiv
Year: 1994
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Quantum Algebra (math.QA)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: The Reshetikhin - Turaeve approach to topological invariants of three - manifolds is generalized to quantum supergroups. A general method for constructing three - manifold invariants is developed, which requires only the study of the eigenvalues of certain central elements of the quantum supergroup in irreducible representations. To illustrate how the method works, $U_q(gl(2|1))$ at odd roots of unity is studied in detail, and the corresponding topological invariants are obtained.
description: 22 pages
Three and Two Colours Finite Density QCD at Strong Coupling: A New Look
Creators: name: Aloisio, R.
name: Azcoiti, V.
name: Di Carlo, G.
name: Galante, A.
name: Grillo, A. F.
Publisher: name: arXiv
Year: 1999
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: Simulations in finite density, beta=0 lattice QCD by means of the Monomer-Dimer-Polymer algorithm show a signal of first order transition at finite temporal size. This behaviour agrees with predictions of the mean field approximation, but is difficult to reconcile with infinite mass analytical solution. The MDP simulations are considered in detail and severe convergence problems are found for the SU(3) gauge group, in a wide region of chemical potential. Simulations of SU(2) model show discrepancies with MDP results as well.
description: 18 pages, 9 figures, to appear in Nucl. Phys. B
Matrix-free multigrid block-preconditioners for higher order Discontinuous Galerkin discretisations
Creators: name: Bastian, Peter
name: Müller, Eike Hermann
name: Müthing, Steffen
name: Piatkowski, Marian
Publisher: name: arXiv
Year: 2018
Subjects: subject: Numerical Analysis (math.NA)
subject: FOS: Mathematics
subject: D.1.3; G.1.8; G.4
subject: 65F08, 65N30, 65N55, 65Y05, 65Y10, 65Y20

description: Efficient and suitably preconditioned iterative solvers for elliptic partial differential equations (PDEs) of the convection-diffusion type are used in all fields of science and engineering. To achieve optimal performance, solvers have to exhibit high arithmetic intensity and need to exploit every form of parallelism available in modern manycore CPUs. The computationally most expensive components of the solver are the repeated applications of the linear operator and the preconditioner. For discretisations based on higher-order Discontinuous Galerkin methods, sum-factorisation results in a dramatic reduction of the computational complexity of the operator application while, at the same time, the matrix-free implementation can run at a significant fraction of the theoretical peak floating point performance. Multigrid methods for high order methods often rely on block-smoothers to reduce high-frequency error components within one grid cell. Traditionally, this requires the assembly and expensive dense matrix solve in each grid cell, which counteracts any improvements achieved in the fast matrix-free operator application. To overcome this issue, we present a new matrix-free implementation of block-smoothers. Inverting the block matrices iteratively avoids storage and factorisation of the matrix and makes it is possible to harness the full power of the CPU. We implemented a hybrid multigrid algorithm with matrix-free block-smoothers in the high order DG space combined with a low order coarse grid correction using algebraic multigrid where only low order components are explicitly assembled. The effectiveness of this approach is demonstrated by solving a set of representative elliptic PDEs of increasing complexity, including a convection dominated problem and the stationary SPE10 benchmark.
description: 28 pages, 10 figures, 10 tables; accepted for publication in Journal of Computational Physics
Worldwide identification of top research actors -institutions and countries- in physiotherapy. Supplementary material
Creators: name: Carballo-Costa, Lidia
Publisher: name: figshare
Year: 2018
Subjects: subject: 110317 Physiotherapy
subject: FOS: Clinical medicine

description: Worldwide identification of top research actors -institutions and countries- in physiotherapy. Supplementary material
Additional file 3 of Preventive interventions to reduce the burden of rheumatic heart disease in populations at risk: a systematic review protocol
Creators: name: Shimanda, Panduleni Penipawa
name: Shumba, Tonderai Washington
name: Brunström, Mattias
name: Söderberg, Stefan
name: Lindholm, Lars
name: Iipinge, Scholastika Ndatinda
name: Norström, Fredrik
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: FOS: Biological sciences
subject: Computational Biology

description: Additional file 3: Annexure 3.
Labrus lunaris Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Perciformes
Labridae
Labrus
Labrus lunaris

description: Labrus lunaris [spec. nov.]
L. pinna caudae medio truncata, dorsali anique linea purpurea, labiis plicatis. @/D. {8/23}. P. 15. V. {0/6}. A. {2/15}. C. 16.
Gron. mus. 2. n. 180. t. 6. f. 2. Labrus oblongus, cauda bifurca, capite purpurascente. @/D. {8/22}. P. 17. V. 1/6. A. {3/17}. C. 14.
Habitat in Indiis.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 283, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
Molecular dynamics study of deformation mechanisms of poly(vinyl alcohol) hydrogel
Creators: name: Lixin Shi
name: Han, Qiang
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Biophysics
subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Cell Biology
subject: Molecular Biology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Hematology
subject: Computational Biology

description: Molecular dynamics (MD) simulations have been performed on the physically crosslinking poly(vinyl alcohol) (PVA) hydrogel to study the deformation mechanisms under uniaxial tensile conditions. The distributions of hydroxyl oxygens and dihedral angle and the number of hydrogen bonds have been analysed to study the structure of the hydrogel. The water content and temperature dependency of mechanical properties have been investigated. The energy contributions from the partially united atom potential have been calculated as a function of strain. It is found that the stress–strain curve comprises toe region, linear region and yield and failure region which is close to most biomaterials. In the toe and yield region, all the contributions to the internal energy change a little. However, in the linear region, the bond stretching and angle bending energy increase rapidly and mainly dominate the region, and the energy increases more rapidly with the increasing water content but the decreasing temperature. The degree of crosslinking decreases with the increasing deformation. The polymer chains occur significant torsional activity in the toe region. Hydrogen bonds are stable in the toe and yield region, but the hydrogen bonds between hydroxyl groups and waters decrease in the linear region.
Existence of phase transition for percolation using the Gaussian Free Field
Creators: name: Duminil-Copin, Hugo
name: Goswami, Subhajit
name: Raoufi, Aran
name: Severo, Franco
name: Yadin, Ariel
Publisher: name: arXiv
Year: 2018
Subjects: subject: Probability (math.PR)
subject: Mathematical Physics (math-ph)
subject: Group Theory (math.GR)
subject: FOS: Mathematics
subject: FOS: Physical sciences
subject: 82B43, 60K35

description: In this paper, we prove that Bernoulli percolation on bounded degree graphs with isoperimetric dimension $d>4$ undergoes a non-trivial phase transition (in the sense that $p_c<1$). As a corollary, we obtain that the critical point of Bernoulli percolation on infinite quasi-transitive graphs (in particular, Cayley graphs) with super-linear growth is strictly smaller than 1, thus answering a conjecture of Benjamini and Schramm. The proof relies on a new technique consisting in expressing certain functionals of the Gaussian Free Field (GFF) in terms of connectivity probabilities for percolation model in a random environment. Then, we integrate out the randomness in the edge-parameters using a multi-scale decomposition of the GFF. We believe that a similar strategy could lead to proofs of the existence of a phase transition for various other models.
description: 19 pages. The current version has been accepted for publication in the Duke Mathematical Journal
Additional file 4 of Preventive interventions to reduce the burden of rheumatic heart disease in populations at risk: a systematic review protocol
Creators: name: Shimanda, Panduleni Penipawa
name: Shumba, Tonderai Washington
name: Brunström, Mattias
name: Söderberg, Stefan
name: Lindholm, Lars
name: Iipinge, Scholastika Ndatinda
name: Norström, Fredrik
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: FOS: Biological sciences
subject: Computational Biology

description: Additional file 4: Annexure 4.
Perturbative two- and three-loop coefficients from large beta Monte Carlo
Creators: name: Lepage, G. P.
name: Mackenzie, P. B.
name: Shakespeare, N. H.
name: Trottier, H. D.
Publisher: name: arXiv
Year: 1999
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: Perturbative coefficients for Wilson loops and the static quark self-energy are extracted from Monte Carlo simulations at large beta on finite volumes, where all the lattice momenta are large. The Monte Carlo results are in excellent agreement with perturbation theory through second order. New results for third order coefficients are reported. Twisted boundary conditions are used to eliminate zero modes and to suppress Z_3 tunneling.
description: 6 pages, 5 figures. Contributions of Howard Trottier and Paul Mackenzie to Lattice '99
The complete chloroplast genome sequence of Didymocarpus yuenlingensis W. T. Wang 1982
Creators: name: Kuang, Weiqi
name: Zhou, Jianjun
name: Xiang, Lixuan
name: Kerui, Huang
name: Deng, Du
Publisher: name: Taylor & Francis
Year: 2025
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Plant Biology

description: Didymocarpus yuenlingensis, a perennial plant in Gesneriaceae, is mainly found in Hunan, China, growing on stone cliffs. Its classification was traditionally based on morphology, lacking genetic data. This study sequenced its chloroplast genome (153,932 bp, GC 37.55%) and identified 133 genes, including 88 protein-coding genes. Phylogenetic analysis revealed its close relationship with D. sinoprimulinus and D. heucherifolius var. yinzhengii. These findings provide valuable genetic resources for understanding its evolutionary relationships and supporting future research on the Didymocarpus genus.
Mesoscopic model for soft flowing systems with tunable viscosity ratio
Creators: name: Fei, Linlin
name: Scagliarini, Andrea
name: Montessori, Andrea
name: Lauricella, Marco
name: Succi, Sauro
name: Luo, Kai H.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Computational Physics (physics.comp-ph)
subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: We propose a mesoscopic model of binary fluid mixtures with tunable viscosity ratio based on a two-range pseudo-potential lattice Boltzmann method, for the simulation of soft flowing systems. In addition to the short range repulsive interaction between species in the classical single-range model, a competing mechanism between the short-range attractive and mid-range repulsive interactions is imposed within each species. Besides extending the range of attainable surface tension as compared with the single-range model, the proposed scheme is also shown to achieve a positive disjoining pressure, independently of the viscosity ratio. The latter property is crucial for many microfluidic applications involving a collection of disperse droplets with a different viscosity from the continuum phase. As a preliminary application, the relative effective viscosity of a pressure-driven emulsion in a planar channel is computed.
description: 16 pages, 15 figures
title: ADCO, Cartulaire général de Cîteaux, dit de Jean de Cirey, (XVe siècle), tome I, Cart. 185 (11 H 70), f. 0284r
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: cartulaire
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge

description: Cartulaire général de Cîteaux, dit de Jean de Cirey, (XVe siècle), tome I, Archives départementales de la Côte-d'Or, Cart. 185 (11 H 70), f. 0284r, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire général de Cîteaux, dit de Jean de Cirey, (XVe siècle), tome I, Archives départementales de la Côte-d'Or, Cart. 185 (11 H 70), f. 0284r, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
title: 02_1856
Creators: name: Wesley Baldwin, John
name: Baldwin, John W.
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2018
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: L'ensemble de ces notes ont été crée par John Baldwin lors d'une de ses premières périodes de résidence à Paris. Ces documents comprennent tous les magistri qu’il avait pu rencontrer dans ses sources. Aux XIIème et XIIIème siècles, les universités n'existant pas encore, le titre de magister s'il évoque certainement une compétence n'est pas rattaché de façon systématique au passage par les écoles. De surcroît, les magistris sont le plus souvent désignés par leur seul prénom. La lecture de ces données est donc difficile et suppose un long travail pour tenter d'identifier un individu auquel on pourrait rattacher plusieurs mentions. John Baldwin avait donc renoncé à utiliser ces données pour donner un prolongement à sa magnifique étude sur les gradués d'université et leur emploi par les Capétiens et les Plantagenêts. Néanmoins, il a conservé ces données et elles sont potentiellement très utile dans le cadre de Studium, comme le sont toutes les mentions dans les volumes des Fasti Ecclesiae Gallicanae de chanoines portant ce titre de magister sans autres précisions. L'ampleur des dépouillements rend ces données très utiles et nous devons une grande reconnaissance à John Baldwin pour avoir pris la peine de faire photocopier ses fiches et de nous les avoir transmises amicalement.
Les données ainsi que les images des fiches sont accessibles sur le site Internet à l'adresse suivante : http://studium-baldwin.lamop.fr/.
Les transcriptions des fiches ont été effectuées par des étudiants de Paris 1 Panthéon - Sorbonne mais elles n'ont pas été corrigées par la suite.
description: Relation: https://lamop.hypotheses.org/
Modified Gravitational Waves Across Galaxies from Macroscopic Gravity
Creators: name: Montani, Giovanni
name: Moretti, Fabio
Publisher: name: arXiv
Year: 2018
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We analyze the propagation of gravitational waves in a medium containing bounded subsystems ("molecules"), able to induce significant Macroscopic Gravity effects. We establish a precise constitutive relation between the average quadrupole and the amplitudes of a vacuum gravitational wave, via the geodesic deviation equation. Then we determine the modified equation for the wave inside the medium and the associated dispersion relation. A phenomenological analysis shows that anomalous polarizations of the wave emerge with an appreciable experimental detectability if the medium is identified with a typical galaxy. Both the modified dispersion relation (wave velocity less than the speed of light) and anomalous oscillations modes could be detectable by the incoming LISA or pulsar timing arrays experiments, having the appropriate size to see the concerned wavelengths (larger than the molecular size) and the appropriate sensitivity to detect the expected deviation from vacuum General Relativity.
description: 10 pages, comments are welcome
Additional file 20 of DrABC: deep learning accurately predicts germline pathogenic mutation status in breast cancer patients based on phenotype data
Creators: name: Liu, Jiaqi
name: Zhao, Hengqiang
name: Zheng, Yu
name: Dong, Lin
name: Zhao, Sen
name: Huang, Yukuan
name: Huang, Shengkai
name: Qian, Tianyi
name: Zou, Jiali
name: Liu, Shu
name: Li, Jun
name: Yan, Zihui
name: Li, Yalun
name: Zhang, Shuo
name: Huang, Xin
name: Wang, Wenyan
name: Li, Yiqun
name: Wang, Jie
name: Ming, Yue
name: Li, Xiaoxin
name: Xing, Zeyu
name: Qin, Ling
name: Zhao, Zhengye
name: Jia, Ziqi
name: Li, Jiaxin
name: Liu, Gang
name: Zhang, Menglu
name: Feng, Kexin
name: Wu, Jiang
name: Zhang, Jianguo
name: Yang, Yongxin
name: Wu, Zhihong
name: Liu, Zhihua
name: Ying, Jianming
name: Wang, Xin
name: Su, Jianzhong
name: Wang, Xiang
name: Wu, Nan
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Plant Biology

description: Additional file 20. A user guide for the DrABC model.
Labrus opercularis Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Perciformes
Labridae
Labrus
Labrus opercularis

description: Labrus opercularis [spec. nov.]
L. cauda bifida, corpore fasciis 10, maculaque operculorum fuscis. Chin. Lagerstr. 24. @/D. {13/20}. P. 16. V. 1/6. A. {15/28}. C. 16.
Habitat in Asia.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 283, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
An Investigation of the Soft Pion Relation in Quenched Lattice QCD
Creators: name: UKQCD Collaboration
name: Bowler, K. C.
name: Maynard, C. M.
name: Lellouch, L.
name: Nieves, J.
name: Richards, D. G.
name: Del Debbio, L.
name: Flynn, J. M.
name: Lesk, V. I.
Publisher: name: arXiv
Year: 1999
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: A lattice determination of the form factor and decay constants for the semileptonic decay of heavy pseudoscalar (PS) mesons at zero recoil is presented from which the soft pion relation is satisfied. Chiral extrapolation of the form factor is performed at constant $q^2$. Pole dominance is used to extrapolate the form factor in heavy quark mass. At the B mass, the form factor at zero recoil lies somewhat below the ratio of decay constants; the relation remains satisfied within error.
description: 3 pages, 2 figures
title: ADCO, Cartulaire de l'abbaye de Cîteaux dit Cartulare Antiquum t.3 (2e moitié XIIIe siècle), Cart. 168 (11 H 66), f. 0163v
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2010
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: cartulaire

description: Cartulaire de l'abbaye de Cîteaux dit Cartulare Antiquum t.3 (2e moitié XIIIe siècle), Archives départementales de la Côte-d'Or, Cart. 168 (11 H 66), f. 0163v, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire de l'abbaye de Cîteaux dit Cartulare Antiquum t.3 (2e moitié XIIIe siècle), Archives départementales de la Côte-d'Or, Cart. 168 (11 H 66), f. 0163v, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
Additional file 1 of How do studies assess the preventability of readmissions? A systematic review with narrative synthesis
Creators: name: Kneepkens, Eva-Linda
name: Brouwers, Corline
name: Singotani, Richelle Glory
name: de Bruijne, Martine C.
name: Karapinar-Çarkit, Fatma
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Search strategy. (DOCX 14 kb)
Scaling and Eigenmode Tests of the Improved Fat Clover Action
Creators: name: Stephenson, Mark
name: DeTar, Carleton
name: DeGrand, Thomas
name: Hasenfratz, Anna
Publisher: name: arXiv
Year: 1999
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We test a recently proposed improved lattice-fermion action, the fat link clover action, examining indicators of pathological small-quark-mass lattice artifacts ("exceptional configurations") on quenched lattices of spacing 0.12 fm and studying scaling properties of the light hadron spectrum for lattice spacing a=0.09 and 0.16 fm. We show that the action apparently has fewer problems with pathological lattice artifacts than the conventional nonperturbatively improved clover action and its spectrum scales just as well.
description: 15 pp RevTeX, 5 Postscript figures, submitted to Phys. Rev. Rearranged section order and added an analysis of fluctuations of the pion correlator
Adapted metrics for singular hyperbolic flows
Creators: name: Araujo, Vitor
name: Coelho, Vinicius
name: Salgado, Luciana
Publisher: name: arXiv
Year: 2018
Subjects: subject: Dynamical Systems (math.DS)
subject: FOS: Mathematics
subject: 37D30 (Primary), 37D25, 58B20 (Secondary)

description: Singular and sectional hyperbolic sets are the objects of the extension of the classical Smale Hyperbolic Theory to flows having invariant sets with singularities accumulated by regular orbits within the set. It is by now well-known that (partially) hyperbolic sets admit adapted metrics. We show the existence of singular adapted metrics for any singular hyperbolic set with respect to a $C^{1}$ vector field on finite dimensional compact manifolds. Moreover, we obtain 2-sectional adapted metrics for certain open classes of 2-sectional hyperbolic sets and also for any hyperbolic set.
description: 23 pages, 1 figure. Improved the statements of the results and corrected the proof of the main theorem. To appear in Bull. Brazilian Mathematical Society
Six phenanthrenes from the roots of Cymbidium faberi Rolfe. and their biological activities
Creators: name: Lv, Shuang-shuang
name: Fu, Yu
name: Chen, Jun
name: Jiao, Yuan
name: Chen, Sui-qing
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Biochemistry
subject: Pharmacology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Cancer

description: A new phenanthrene compound, 7-(4-hydroxybenzyl)-8-methoxy-9,10- dihydrophenanthrene-2,5-diol (HMD), along with five known compounds (Coelonin, DD, Shancidin, HDP and MDD) were isolated from the roots of Cymbidium faberi Rolfe. (CFR). Their structures were identified using various spectroscopic methods. These compounds were reported for the first time in the genus. All isolated compounds were tested by radical-scavenging ability against 1,1-diphenyl-2-picryl-hydrazyl (DPPH), cytotoxic activity against three human cancer cell lines and inflammatory activity. Among them, Shancidin exhibited the stronger DPPH-scavenging activity (IC50=6.67 ± 0.84 μΜ) and cytotoxic activity against three tumour cell lines. Except for HDP, all compounds dose-dependently suppressed production of NO, TNF-α, IL-6 in LPS induced mouse primary peritoneal macrophage and showed anti-inflammatory activity. Moreover, 18 compounds were identified by UHPLC-LTQ-Orbitrap-MS combined with MS database, which provides a basis for further research.
Additional file 2 of How do studies assess the preventability of readmissions? A systematic review with narrative synthesis
Creators: name: Kneepkens, Eva-Linda
name: Brouwers, Corline
name: Singotani, Richelle Glory
name: de Bruijne, Martine C.
name: Karapinar-Çarkit, Fatma
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Inclusion criteria. (DOCX 85 kb)
SSOR preconditioning in simulations of the QCD Schrödinger functional
Creators: name: Guagnelli, Marco
name: Heitger, Jochen
Publisher: name: arXiv
Year: 1999
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We report on a parallelized implementation of SSOR preconditioning for O(a) improved lattice QCD with Schrödinger functional boundary conditions. Numerical simulations in the quenched approximation at parameters in the light quark mass region demonstrate that a performance gain of a factor $\sim$ 1.5 over even-odd preconditioning can be achieved.
description: 15 pages, latex2e, 4 Postscript figures, uses packages elsart and epsfig
Labrus pavo Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Perciformes
Labridae
Labrus
Labrus pavo

description: Labrus pavo [spec. nov.]
L. viridi caeruleo sanguineo canoque varius, cauda bifida.
Art. gen. 34. syn. 55. Labrus pulchre varius, pinnis pectoralibus rotundatis.
Hasselqv. iter. 344. n. 77. Labrus Pavo. @/B. 6. D. 31. P. 14. V. 6. A. {3/14}. C. 16.
Habitat in M. Mediterraneo ad Syriam.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 283, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
Additional file 1: of How do studies assess the preventability of readmissions? A systematic review with narrative synthesis
Creators: name: Kneepkens, Eva-Linda
name: Brouwers, Corline
name: Singotani, Richelle
name: Bruijne, Martine
name: Karapinar-Ăarkit, Fatma
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Science Policy

description: Search strategy. (DOCX 14 kb)
${\cal H}$-cohomologies versus algebraic cycles
Creators: name: Barbieri-Viale, Luca
Publisher: name: arXiv
Year: 1994
Subjects: subject: Algebraic Geometry (math.AG)
subject: FOS: Mathematics

description: Global intersection theories for smooth algebraic varieties via products in {\it appropriate}\, Poincaré duality theories are obtained. We assume given a (twisted) cohomology theory $H^*$ having a cup product structure and we let consider the ${\cal H}$-cohomology functor $X\leadsto H^{\#}_{Zar}(X,{\cal H}^*)$ where ${\cal H}^*$ is the Zariski sheaf associated to $H^*$. We show that the ${\cal H}$-cohomology rings generalize the classical ``intersection rings'' obtained via rational or algebraic equivalences. Several basic properties e.g.\, Gysin maps, projection formula and projective bundle decomposition, of ${\cal H}$-cohomology are obtained. We therefore obtain, for $X$ smooth, Chern classes $c_{p,i} : K_i(X) \to H^{p-i}(X,{\cal H}^p)$ from the Quillen $K$-theory to ${\cal H}$-cohomologies according with Gillet and Grothendieck. We finally obtain the ``blow-up formula'' $$H^p(X',{\cal H}^q) \cong H^p(X,{\cal H}^q)\oplus \bigoplus_{i=0}^{c-2} H^{p-1-i}(Z,{\cal H}^{q-1-i})$$ where $X'$ is the blow-up of $X$ smooth, along a closed smooth subset $Z$ of pure codimension $c$. Singular cohomology of associated analityc space, étale cohomology, de Rham and Deligne-Beilinson cohomologies are examples for this setting.
description: 51 pages, LaTeX 2.09
$E_2$-cells and mapping class groups
Creators: name: Galatius, Soren
name: Kupers, Alexander
name: Randal-Williams, Oscar
Publisher: name: arXiv
Year: 2018
Subjects: subject: Algebraic Topology (math.AT)
subject: FOS: Mathematics
subject: 57R90, 57R15, 57R56, 55P47

description: We prove a new kind of stabilisation result, "secondary homological stability", for the homology of mapping class groups of orientable surfaces with one boundary component. These results are obtained by constructing CW approximations to the classifying spaces of these groups, in the category of $E_2$-algebras, which have no $E_2$-cells below a certain vanishing line.
description: v2: Final version, to appear in Publ. Math. Inst. Hautes \'Etudes Sci
The complete chloroplast genome of Malva cathayensis M.G.Gilbert, Y.Tang & Dorr 2007 and its phylogenetic analysis
Creators: name: Zhang, Shuming
name: Zhang, Kaihua
name: Jiao, Yuting
name: Liu, Junfei
name: Yuan, Weihan
name: Wang, Liqiang
Publisher: name: Taylor & Francis
Year: 2025
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Malva cathayensis, a wild medicinal and edible Malvaceae species, lacked genomic data until now. In this study, we presented its first complete chloroplast genome (158,793 bp), featuring a quadripartite structure: 87,215 bp LSC, 20,766 bp SSC, and two 25,406 bp IRs. The genome contains 129 genes (85 protein-coding, 36 tRNA, 8 rRNA) with 37.1% GC content. Phylogenetic analysis revealed two Malva clades, with M. cathayensis grouping alongside M. crispa, M. verticillata, and M. parviflora. This study provides essential molecular data for Malva's evolutionary relationships and diversification, enabling future comparative genomic research in this genus.
Additional file 7 of DrABC: deep learning accurately predicts germline pathogenic mutation status in breast cancer patients based on phenotype data
Creators: name: Liu, Jiaqi
name: Zhao, Hengqiang
name: Zheng, Yu
name: Dong, Lin
name: Zhao, Sen
name: Huang, Yukuan
name: Huang, Shengkai
name: Qian, Tianyi
name: Zou, Jiali
name: Liu, Shu
name: Li, Jun
name: Yan, Zihui
name: Li, Yalun
name: Zhang, Shuo
name: Huang, Xin
name: Wang, Wenyan
name: Li, Yiqun
name: Wang, Jie
name: Ming, Yue
name: Li, Xiaoxin
name: Xing, Zeyu
name: Qin, Ling
name: Zhao, Zhengye
name: Jia, Ziqi
name: Li, Jiaxin
name: Liu, Gang
name: Zhang, Menglu
name: Feng, Kexin
name: Wu, Jiang
name: Zhang, Jianguo
name: Yang, Yongxin
name: Wu, Zhihong
name: Liu, Zhihua
name: Ying, Jianming
name: Wang, Xin
name: Su, Jianzhong
name: Wang, Xiang
name: Wu, Nan
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Plant Biology

description: Additional file 7: Figure S5. The Multi-center Validation of the DrABC Model.
Pushing NRQCD to the limit
Creators: name: Stewart, Chris
name: Koniuk, Roman
Publisher: name: arXiv
Year: 1999
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: Lattice NRQCD has proven successful in describing the physics of the upsilon system and B-mesons, though some concerns arise when it is used in simulations of charm quarks. It is certainly possible that the NRQCD expansion is not converging fast enough at this scale. We present some preliminary results on the low-mass breakdown of NRQCD, in particular the behaviour of heavy quarkonium and heavy-light meson spectra as the bare heavy quark mass is decreased well below 1, with the aim of understanding more about the manifestation of this breakdown.
description: Lattice 99 submission, 3 Pages, 3 eps figures
The complete chloroplast genome of Tulipa uniflora (Liliaceae) in Mongolia
Creators: name: Baasanmunkh, Shukherdorj
name: Nyamgerel, Nudkhuu
name: Oyuntsetseg, Batlai
name: Munkhtulga, Dariganga
name: Erst, Andrey
name: Kubentayev, Serik
name: Bayarmaa, Gun-Aajav
name: Yoon, Jung Won
name: Choi, Hyeok Jae
Publisher: name: Taylor & Francis
Year: 2025
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Plant Biology

description: Tulipa uniflora (L.) Besser ex Baker (1874) is distributed throughout China, Mongolia, and Russia (Siberia). This study reports the complete chloroplast genome sequence of T. uniflora based on high-throughput sequencing. The genome has a natural quadripartite structure and is 152,254 bp long with 36.5% GC content. It has 98 unique genes, including 4 rRNA genes, 29 tRNA genes, and 75 protein-coding genes. A total of 77 single-sequence repeats were identified, mostly in intergenic spacer regions. Anticodon recognition patterns revealed 19,717 codons in the protein-coding genes. Based on the whole chloroplast genome, T. uniflora was separated early from Tulipa species.
Additional file 3 of How do studies assess the preventability of readmissions? A systematic review with narrative synthesis
Creators: name: Kneepkens, Eva-Linda
name: Brouwers, Corline
name: Singotani, Richelle Glory
name: de Bruijne, Martine C.
name: Karapinar-Çarkit, Fatma
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Definition of variables. (DOCX 18 kb)
Additional file 4 of How do studies assess the preventability of readmissions? A systematic review with narrative synthesis
Creators: name: Kneepkens, Eva-Linda
name: Brouwers, Corline
name: Singotani, Richelle Glory
name: de Bruijne, Martine C.
name: Karapinar-Çarkit, Fatma
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Characteristics of studies which were excluded based on the inclusion criteria of the flow chart (N=29). (DOCX 24 kb)
Additional file 1: of Development of a core outcome set (COS) and selecting outcome measurement instruments (OMIs) for non-valvular atrial fibrillation in traditional Chinese medicine clinical trials: study protocol
Creators: name: Qiu, Ruijin
name: Li, Min
name: Zhang, Xiaoyu
name: Chen, Shiqi
name: Li, Chengyu
name: Shang, Hongcai
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: Developmental Biology
subject: Cancer
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: The search strategy of the systematic review. (DOCX 13 kb)
Additional file 5 of How do studies assess the preventability of readmissions? A systematic review with narrative synthesis
Creators: name: Kneepkens, Eva-Linda
name: Brouwers, Corline
name: Singotani, Richelle Glory
name: de Bruijne, Martine C.
name: Karapinar-Çarkit, Fatma
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Detailed descriptives of included studies (N=48). (DOCX 33 kb)
Symmetry Breaking, Duality and Fine-Tuning in Hierarchical Spin Models
Creators: name: Godina, J. J.
name: Meurice, Y.
name: Niermann, S.
name: Oktay, M. B.
Publisher: name: arXiv
Year: 1999
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We discuss three questions related to the critical behavior of hierarchical spin models: 1) the hyperscaling relations in the broken symmetry phase; 2) the combined use of dual expansions to calculate the non-universal quantities; 3) the fine-tuning issue in approximately supersymmetric models.
description: 3 pages, 1 figure, Lattice99 (spin)
Potts Flux Tube Model at Nonzero Chemical Potential
Creators: name: Condella, Jac
name: DeTar, Carleton
Publisher: name: arXiv
Year: 1999
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We model the deconfinement phase transition in quantum chromodynamics at nonzero baryon number density and large quark mass by extending the flux tube model (three-state, three-dimensional Potts model) to nonzero chemical potential. In a direct numerical simulation we confirm mean-field-theory predictions that the deconfinement transition does not occur in a baryon-rich environment.
description: 14 pp RevTeX, 10 Postscript figures, submitted to Phys. Rev D. (Corrected some typographical errors.)
Additional file 14 of DrABC: deep learning accurately predicts germline pathogenic mutation status in breast cancer patients based on phenotype data
Creators: name: Liu, Jiaqi
name: Zhao, Hengqiang
name: Zheng, Yu
name: Dong, Lin
name: Zhao, Sen
name: Huang, Yukuan
name: Huang, Shengkai
name: Qian, Tianyi
name: Zou, Jiali
name: Liu, Shu
name: Li, Jun
name: Yan, Zihui
name: Li, Yalun
name: Zhang, Shuo
name: Huang, Xin
name: Wang, Wenyan
name: Li, Yiqun
name: Wang, Jie
name: Ming, Yue
name: Li, Xiaoxin
name: Xing, Zeyu
name: Qin, Ling
name: Zhao, Zhengye
name: Jia, Ziqi
name: Li, Jiaxin
name: Liu, Gang
name: Zhang, Menglu
name: Feng, Kexin
name: Wu, Jiang
name: Zhang, Jianguo
name: Yang, Yongxin
name: Wu, Zhihong
name: Liu, Zhihua
name: Ying, Jianming
name: Wang, Xin
name: Su, Jianzhong
name: Wang, Xiang
name: Wu, Nan
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Plant Biology

description: Additional file 14: Figure S9. Performance of Risk Prediction Models for Breast Cancer Patients with germline Pathogenic Variants in Cancer Predisposition Genes other than BRCA1/2.
Lattice QCD with the Overlap Fermions at Strong Gauge Coupling
Creators: name: Ichinose, Ikuo
name: Nagao, Keiichi
Publisher: name: arXiv
Year: 1999
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We generalize overlap fermion by Narayanan and Neuberger by introducing a hopping parameter t. This lattice fermion has desirable properties as the original overlap fermion. We expand "Dirac" operator of this fermion in powers of t. Higher-order terms of t are long-distance terms and this t-expansion is a kind of the hopping expansion. It is shown that the Ginsparg-Wilson relation is satisfied at each order of t. We show that this t-expansion is useful for study of the strong-coupling gauge theory. We apply this formalism to the lattice QCD and study its chiral phase structure at strong coupling. We find that there are (at least) two phases one of which has desired chiral properties of QCD. Possible phase structure of the lattice QCD with the overlap fermions is proposed.
description: Latex 17 pages, one figure, references added, typo corrected, a final version to appear in Nucl.Phys.B
Additional file 2: of How do studies assess the preventability of readmissions? A systematic review with narrative synthesis
Creators: name: Kneepkens, Eva-Linda
name: Brouwers, Corline
name: Singotani, Richelle
name: Bruijne, Martine
name: Karapinar-Ăarkit, Fatma
Publisher: name: figshare
Year: 2019
Subjects: Medicine
Biotechnology
Developmental Biology
Science Policy

description: Inclusion criteria. (DOCX 85 kb)
Labrus auritus Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Perciformes
Labridae
Labrus
Labrus auritus

description: Labrus auritus [spec. nov.]
L. cauda bifida, operculis branchiarum pinniformibus. @/D. {10/21}. P. 15. V. 6. A. 13. C. 17.
Habitat in Philadelphia. Mus. De Geer.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 283, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
Additional file 15 of DrABC: deep learning accurately predicts germline pathogenic mutation status in breast cancer patients based on phenotype data
Creators: name: Liu, Jiaqi
name: Zhao, Hengqiang
name: Zheng, Yu
name: Dong, Lin
name: Zhao, Sen
name: Huang, Yukuan
name: Huang, Shengkai
name: Qian, Tianyi
name: Zou, Jiali
name: Liu, Shu
name: Li, Jun
name: Yan, Zihui
name: Li, Yalun
name: Zhang, Shuo
name: Huang, Xin
name: Wang, Wenyan
name: Li, Yiqun
name: Wang, Jie
name: Ming, Yue
name: Li, Xiaoxin
name: Xing, Zeyu
name: Qin, Ling
name: Zhao, Zhengye
name: Jia, Ziqi
name: Li, Jiaxin
name: Liu, Gang
name: Zhang, Menglu
name: Feng, Kexin
name: Wu, Jiang
name: Zhang, Jianguo
name: Yang, Yongxin
name: Wu, Zhihong
name: Liu, Zhihua
name: Ying, Jianming
name: Wang, Xin
name: Su, Jianzhong
name: Wang, Xiang
name: Wu, Nan
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Plant Biology

description: Additional file 15: Figure S10. The Contribution of Family Cancer History and Pathological Features to the DrABC Model.
Nanoparticles growth in dynamic plasma
Creators: name: Vekselman, V.
name: Shneider, M. N.
name: Raitses, Y.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Plasma Physics (physics.plasm-ph)
subject: FOS: Physical sciences

description: Coagulation growth kinetics of nanoparticles in plasma is affected by inter-particle electrostatic forces due to charging phenomenon. In stationary plasmas, unipolar charging of particles results in retardation of particles growth and may result in limitation on a particle size. We demonstrate opposite effect of enhanced particles growth in atmospheric pressure non-stationary arc discharge. Modeling of the nanoparticles growth kinetics revealed the formation of bipolar charge distribution. As a result, reversed (attractive) Coulomb forces promote formation of micrometer size particles in a millisecond time scale as observed in experiment.
description: 4 figures and video file showing the growth of nanoparticles in carbon arc