cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Emergence of the stripe-domain phase in patterned Permalloy films
Creators: name: Voltan, S.
name: Cirillo, C.
name: Snijders, H. J.
name: Lahabi, K.
name: Garcia-Santiago, A.
name: Hernandez, J. M.
name: Attanasio, C.
name: Aarts, J.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: The occurrence of stripe domains in ferromagnetic Permalloy (Py=Fe$_{20}$Ni$_{80}$) is a well known phenomenon which has been extensively observed and characterized. This peculiar magnetic configuration appears only in films with a thickness above a critical value ($d_{cr}$), which is strongly determined by the sputtering conditions (i.e. deposition rate, temperature, magnetic field). So far, $d_{cr}$ has usually been presented as the boundary between the homogeneous (H) and stripe-domains (SD) regime, respectively below and above $d_{cr}$. In this work we study the transition from the H to the SD regime in thin films and microstructured bridges of Py with different thicknesses. We find there is an intermediate regime, over a quite significant thickness range below d$_{cr}$, which is signaled in confined structures by a quickly changing domain-wall configuration and by a broadening of the magnetoresistance dip at the coercive field. We call this the emerging stripe-domains (ESD) regime. The transition from the ESD to the SD regime is accompanied by a sharp increase of the magnetoresistance ratio at the thickness where stripes appear in MFM.
description: 9 pages, 9 figures
Boas Práticas de Enfermagem em Terapia Nutricional
Creators: name: Da Graça Machado, Maria Clara
name: Couto, Vanessa Macedo
Publisher: name: Zenodo
Year: 2023
Subjects: Zenodo
Gerência de Enfermagem
Terapia Nutricional

description: Produto de Ensino Teórico Prático da Disciplina de Gerência de Enfermagem II Docentes: Érica Brandão de Moraes, Geilsa Soraia Cavalcanti Valente e Lívia Bertasso Araujo Portugal Preceptora: Enfermeira Vanessa Macedo Couto
Additional file 3 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure
Creators: name: Zou, Angela
name: Nadeau, Kerry
name: Xiong, Xuejian
name: Wang, Pauline W.
name: Copeland, Julia K.
name: Lee, Jee Yeon
name: Pierre, James St.
name: Ty, Maxine
name: Taj, Billy
name: Brumell, John H.
name: Guttman, David S.
name: Sharif, Shayan
name: Korver, Doug
name: Parkinson, John
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 3: Supplemental Figure 3. Pie-chart heatmap of metabolic pathways enriched with significantly differentially expressed enzymes through comparisons between diets. There are 35 KEGG metabolic pathways enriched with significantly differentially expressed enzymes which were annotated from either ceca or jejunum samples based on comparisons between diets. Each node in the heatmap is a pie chart showing proportion of enzymes that were significantly up-regulated (orange), significantly down-regulated (blue), and not significantly different (white) with the wheat diet. In addition, the size of each node indicates the number of expressed enzymes in each KEGG pathway.
Nuclear shape phase transition within a conjonction of γ-rigid and γ-stable collective behaviours in deformation dependent mass formalism
Creators: name: Chabab, M.
name: Batoul, A. El
name: Lahbas, A.
name: Oulne, M.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: In this paper, we present a theoretical study of a conjonction of $γ$-rigid and $γ$-stable collective motions in critical point symmetries of the phase transitions from spherical to deformed shapes of nuclei using exactly separable version of the Bohr Hamiltonian with deformation-dependent mass term. The deformation-dependent mass is applied simultaneously to $γ$-rigid and $γ$-stable parts of this famous collective Hamiltonian. Moreover, the $β$ part of the problem is described by means of Davidson potential, while the $γ$-angular part corresponding to axially symmetric shapes is treated by a Harmonic Osillator potential. The energy eigenvalues and normalized eigenfunctions of the problem are obtained in compact forms by making use of the asymptotic iteration method. The combined effect of the deformation-dependent mass and rigidity as well as harmonic oscillator stiffness parameters on the energy spectrum and wave functions is duly investigated. Also, the electric quadrupole transition ratios and energy sprectrum of some $γ$-stable and prolate nuclei are calculated and compared with the experimental data as well as with other theoretical models.
description: 22 pages, 5 figures, 7 tables. arXiv admin note: text overlap with arXiv:1506.05782, arXiv:1103.5935 by other authors
Superresolution optical magnetic imaging and spectroscopy using individual electronic spins in diamond
Creators: name: Jaskula, Jean-Christophe
name: Bauch, Erik
name: Arroyo-Camejo, Silvia
name: Lukin, Mikhail D.
name: Hell, Stefan W.
name: Trifonov, Alexei S.
name: Walsworth, Ronald L.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Quantum Physics (quant-ph)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Nitrogen vacancy (NV) color centers in diamond are a leading modality for both superresolution optical imaging and nanoscale magnetic field sensing. In this work, we solve the remaining key challenge of performing optical magnetic imaging and spectroscopy selectively on multiple NV centers that are located within a diffraction-limited field-of-view. We use spin-RESOLFT microscopy to enable precision nanoscale mapping of magnetic field patterns with resolution down to ~20 nm, while employing a low power optical depletion beam. Moreover, we use a shallow NV to demonstrate the detection of proton nuclear magnetic resonance (NMR) signals exterior to the diamond, with 50 nm lateral imaging resolution and without degrading the proton NMR linewidth.
description: main text: 5 pages, 4 figures. Supplementary Material: 5 pages, 8 figures
Additional file 4 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure
Creators: name: Zou, Angela
name: Nadeau, Kerry
name: Xiong, Xuejian
name: Wang, Pauline W.
name: Copeland, Julia K.
name: Lee, Jee Yeon
name: Pierre, James St.
name: Ty, Maxine
name: Taj, Billy
name: Brumell, John H.
name: Guttman, David S.
name: Sharif, Shayan
name: Korver, Doug
name: Parkinson, John
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 4: Supplemental Figure 4. Principal component analysis based on annotated metabolic enzymes expression in ceca samples. Each node represents an individual ceca sample, with colours and shapes indicating specific treatment types (see inset key).
Analyzing the regulatory framework gaps for gas distribution networks with decreasing natural gas demand in Germany
Creators: name: Oberle, Stella
name: Gnann, Till
name: Wayas, Louis
name: Wietschel, Martin
Publisher: name: Fraunhofer-Gesellschaft
Year: 2023
Subjects: Asset
Purchase year
Depreciation period
Historical purchase value
Day reinstatement value
Regulation parameters

description: The two datasets are supplement to the publication Oberle, Stella; Gnann, Till; Wayas, Louis; Wietschel, Martin "Analyzing the regulatory framework gaps for gas distribution networks with decreasing natural gas demand in Germany" (to be published): German energy system studies, investigating the energy transition pathways to the set climate targets, depict a significant decrease in gas demand. This leads to a discussion about the long-term need of gas distribution networks. The discussion intensified with the war in Ukraine and the subsequent energy price crisis. The German regulatory agency responded to these developments with adjusting the regulatory framework to the current challenges. Up to now, the depreciation period of network components varies between 45 to 65 years, and consequently the monetary capital is tied up for a long time, lowering the flexibility of network operators to react to current challenges. Therefore, the German regulatory agency allows the shortening of depreciation periods of new gas network assets. Nonetheless, it is still unclear how to deal with existing assets at risk of becoming stranded assets and how to regulate the decommissioning of gas networks. Therefore, this paper addresses the research question: “What effect do different regulations for decommissioning of gas distribution networks have on operators and users?”. To answer the question the model MERLIN is applied, which integrates the current and future regulation options into long-term investment decision analysis. The results show a need of shortening the depreciation period of existing assets to avoid stranded assets. Further, partial decommissioning with including the decommission costs in the regulatory framework and hence finance it through the network users, is the most economical attractive option for network operator and users.
Detection of polarized continuum emission of the Dusty S-cluster Object (DSO/G2)
Creators: name: Shahzamanian, Banafsheh
name: Zajacek, Michal
name: Valencia-S., Monica
name: Peissker, Florian
name: Eckart, Andreas
name: Sabha, Nadeen
name: Parsa, Marzieh
Publisher: name: arXiv
Year: 2016
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: A peculiar source in the Galactic center known as the Dusty S-cluster Object (DSO/G2) moves on a highly eccentric orbit around the supermassive black hole with the pericenter passage in the spring of 2014. Its nature has been uncertain mainly because of the lack of any information about its intrinsic geometry. For the first time, we use near-infrared polarimetric imaging data to obtain constraints about the geometrical properties of the DSO. We find out that DSO is an intrinsically polarized source, based on the significance analysis of polarization parameters, with the degree of the polarization of $\sim 30\%$ and an alternating polarization angle as it approaches the position of Sgr A*. Since the DSO exhibits a near-infrared excess of $K_{\rm s}-L'>3$ and remains rather compact in emission-line maps, its main characteristics may be explained with the model of a pre-main-sequence star embedded in a non-spherical dusty envelope.
description: 2 pages, 1 figure, IAU Symposium 322, The Multi-Messenger Astrophysics of the Galactic Centre, Steve Longmore, Geoff Bicknell and Roland Crocker, eds
Additional file 5 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure
Creators: name: Zou, Angela
name: Nadeau, Kerry
name: Xiong, Xuejian
name: Wang, Pauline W.
name: Copeland, Julia K.
name: Lee, Jee Yeon
name: Pierre, James St.
name: Ty, Maxine
name: Taj, Billy
name: Brumell, John H.
name: Guttman, David S.
name: Sharif, Shayan
name: Korver, Doug
name: Parkinson, John
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 5: Supplemental Figure 5. Expression heatmap of metabolic pathways enriched in significantly differentially expressed enzymes. There are 35 KEGG metabolic pathways enriched in significantly differentially expressed enzymes associated with samples from either ceca or jejunum. Changes of the average expression value (log2) of each gene associated with an enzyme in that pathway are indicated by red-green or blue-yellow gradients for ceca and jejunum samples, respectively.
Additional file 6 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure
Creators: name: Zou, Angela
name: Nadeau, Kerry
name: Xiong, Xuejian
name: Wang, Pauline W.
name: Copeland, Julia K.
name: Lee, Jee Yeon
name: Pierre, James St.
name: Ty, Maxine
name: Taj, Billy
name: Brumell, John H.
name: Guttman, David S.
name: Sharif, Shayan
name: Korver, Doug
name: Parkinson, John
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 6: Supplemental Figure 6. Taxonomic contributions to expressed enzymes in metabolic pathways across different AGP treatments and diets with Day40 ceca samples. Glycolysis/Gluconeogenesis, Pentose Phosphate and Tricarboxylic acid (TCA) cycle pathways are shown here integrated with data generated from cecal samples collected at day 40. Each pie chart represents the taxonomic distributions of an enzyme (see key for color code). The size of pie charts indicates the average expression value (with log2 transform) of genes encoding that enzyme. Pie charts with red arrows refer to enzymes that are significantly up-regulated relative to the paired (+/- AGPs) sample. The abbreviations used here can be found in Supplemental Table 11.
Artificial neural networks and fuzzy logic for recognizing alphabet characters and mathematical symbols
Creators: name: Farulla, Giuseppe Airò
name: Armano, Tiziana
name: Capietto, Anna
name: Murru, Nadir
name: Rossini, Rosaria
Publisher: name: arXiv
Year: 2016
Subjects: subject: Neural and Evolutionary Computing (cs.NE)
subject: Machine Learning (cs.LG)
subject: FOS: Computer and information sciences

description: Optical Character Recognition software (OCR) are important tools for obtaining accessible texts. We propose the use of artificial neural networks (ANN) in order to develop pattern recognition algorithms capable of recognizing both normal texts and formulae. We present an original improvement of the backpropagation algorithm. Moreover, we describe a novel image segmentation algorithm that exploits fuzzy logic for separating touching characters.
Study of the pd(dp) -> 3He pi pi reactions close to threshold
Creators: name: Bellemann, F.
name: Berg, A.
name: Bisplinghoff, J.
name: Bohlscheid, G.
name: Ernst, J.
name: Henrich, C.
name: Hinterberger, F.
name: Ibald, R.
name: Jahn, R.
name: Joosten, R.
name: Kilian, K.
name: Kozela, A.
name: Machner, H.
name: Magiera, A.
name: Munkel, J.
name: von Neumann-Cosel, P.
name: von Rossen, P.
name: Schnitker, H.
name: Scho, K.
name: Smyrski, J.
name: Toelle, R.
name: Wilkin, C.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Nuclear Experiment (nucl-ex)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: New experimental data on the pd -> 3He pi+ pi- reaction obtained with the COSY-MOMO detector below the three-pion threshold are presented. The reaction was also studied in inverse kinematics with a deuteron beam and the higher counting rates achieved were especially important at low excess energies. The comparison of these data with inclusive pd -> 3He+X rates allowed estimates also to be made of pi0 pi0 production. The results confirm our earlier findings that close to threshold there is no enhancement at low excitation energies in the pi+ pi- system, where the data seem largely suppressed compared to phase space. Possible explanations for this behavior, such as strong p- waves in the pi+pi- -system or the influence of two-step processes, are explored.
Sodium abundances of AGB and RGB stars in galactic globular clusters I. Analysis and results of NGC 2808
Creators: name: Wang, Y.
name: Primas, F.
name: Charbonnel, C.
name: Van der Swaelmen, M.
name: Bono, G.
name: Chantereau, W.
name: Zhao, G.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: Galactic globular clusters (GC) are known to have multiple stellar populations and be characterised by similar chemical features, e.g. O-Na anti-correlation. While second-population stars, identified by their Na overabundance, have been found from the main sequence turn-off up to the tip of the red giant branch in various Galactic GCs, asymptotic giant branch (AGB) stars have rarely been targeted. The recent finding that NGC 6752 lacks an Na-rich AGB star has thus triggered new studies on AGB stars in GCs, since this result questions our basic understanding of GC formation and stellar evolution theory. In order to compare the Na abundance distributions of AGB and RGB stars in Galactic GCs and investigate whether the presence of Na-rich stars on the AGB is metallicity-dependent, we obtained the high-resolution spectra with the multi-object high-resolution spectrograph FLAMES on ESO/VLT for a sample of AGB and RGB stars in the Galactic GC NGC 2808. The accurate Na abundances were derived for 31 AGB and 40 RGB stars. We find that NGC 2808 has a mean metallicity of -1.11 $\pm$ 0.08 dex, in good agreement with earlier analyses. Comparable Na abundance dispersions are derived for our AGB and RGB samples, with the AGB stars being slightly more concentrated than the RGB stars. The ratios of Na-poor first-population to Na-rich second-population stars are 45:55 in the AGB sample and 48:52 in the RGB sample. NGC 2808 has Na-rich second-population AGB stars, which turn out to be even more numerous - in relative terms - than their Na-poor AGB counterparts and the Na-rich stars on the RGB. Our findings are well reproduced by the fast rotating massive stars scenario and they do not contradict the recent results that there is not an Na-rich AGB star in NGC 6752. NGC 2808 thus joins the larger group of Galactic GCs for which Na-rich second-population stars on the AGB have recently been found.
description: 13 pages, accepted by Astronomy & Astrophysics
Additional file 7 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure
Creators: name: Zou, Angela
name: Nadeau, Kerry
name: Xiong, Xuejian
name: Wang, Pauline W.
name: Copeland, Julia K.
name: Lee, Jee Yeon
name: Pierre, James St.
name: Ty, Maxine
name: Taj, Billy
name: Brumell, John H.
name: Guttman, David S.
name: Sharif, Shayan
name: Korver, Doug
name: Parkinson, John
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 7: Supplemental Figure 7. Taxonomic contributions to expressed enzymes in Purine metabolic pathway across different AGP treatments and diets with Day24 ceca samples. Shown here are the De novo biosynthesis and salvage pathways for purine, integrated with data generated from ceca collected at day 24. Each pie chart represents the taxonomic distributions of an enzyme (see key for color code). The size of pie charts indicates the average expression value (with log2 transform) of genes encoding that enzyme. Pie charts with red arrows refer to enzymes that are significantly up-regulated relative to the paired (+/- AGPs) sample. The abbreviations used here can be found in Supplemental Table 11.
Improved measurement of the hyperfine structure of the laser cooling level $4f^{12}(^3 H_6)5d_{5/2}6s^2$ $(J=9/2)$ in $^{169}$Tm
Creators: name: Fedorov, S. A.
name: Vishnyakova, G. A.
name: Kalganova, E. S.
name: Sukachev, D. D.
name: Golovizin, A. A.
name: Tregubov, D. O.
name: Khabarova, K. Yu.
name: Akimov, A. V.
name: Kolachevsky, N. N.
name: Sorokin, V. N.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Atomic Physics (physics.atom-ph)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: We report on the improved measurement of the hyperfine structure of $4f^{12}(^3 H_6)5d_{5/2}6s^2$ $(J=9/2)$ excited state in Tm-169 which is involved in the second-stage laser cooling of Tm. To measure the absolute value of the hyperfine splitting interval we used Doppler-free frequency modulation saturated absorption spectroscopy of Tm atoms in a vapor cell. The sign of the hyperfine constant was determined independently by spectroscopy of laser cooled Tm atoms. The hyperfine constant of the level equals $A_J=-422.112(32)$ MHz that corresponds to the energy difference between two hyperfine sublevels of $-2110.56(16)$~MHz. In relation to the saturated absorption measurement we quantitatively treat contributions of various mechanisms into the line broadening and shift. We consider power broadening in the case when Zeeman sublevels of atomic levels are taken into account. We also discuss the line broadening due to frequency modulation and relative intensities of transitions in saturated-absorption experiments.
Thermal Conductivity of GaAs/Ge Nanostructures
Creators: name: Jia, Roger
name: Zeng, Lingping
name: Chen, Gang
name: Fitzgerald, Eugene A.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Superlattices are promising low-dimensional nanomaterials for thermoelectric technology that is capable of directly converting low-grade heat energy to useful electrical power. In this work, the thermal conductivities of GaAs/Ge superlattice nanostructures were investigated systematically in relation to their morphologies and interfaces. Thermal conductivities were measured using ultrafast time-domain thermoreflectance and were found to decrease with increasing interface densities, consistent with our understanding of microscopic phonon transport in the particle regime. Lower thermal conductivities were observed in (GaAs)0.77(Ge2)0.23 alloys; transmission electron microscopy study reveals phase separation in the alloys. These alloys can be interpreted as fine nanostructures, with length scales comparable to the periods of very thin superlattices. Our experimental findings help gain fundamental insight into nanoscale thermal transport in superlattices and are also useful for future improvement of thermoelectric performance using superlattice nanostructures.
description: 11 pages, 5 figures
Daily-Dairy-Study Design Preregistration
Creators: name: Schmiedecke, Vivian Maike
name: Fliedner, Karla
name: Salzburg, Sophia
name: Tkaczik, Hannah Marie
name: Haehner, Peter
Publisher: name: OSF Registries
Year: 2023
Subjects: subject: Personality and Social Contexts
subject: Social and Behavioral Sciences
subject: Psychology
subject: FOS: Psychology

description: Preregistration of the study “Perception and Interpretation of Daily Events” (PIDE-Study).
Additional file 8 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure
Creators: name: Zou, Angela
name: Nadeau, Kerry
name: Xiong, Xuejian
name: Wang, Pauline W.
name: Copeland, Julia K.
name: Lee, Jee Yeon
name: Pierre, James St.
name: Ty, Maxine
name: Taj, Billy
name: Brumell, John H.
name: Guttman, David S.
name: Sharif, Shayan
name: Korver, Doug
name: Parkinson, John
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 8: Supplemental Figure 8. Taxonomic contributions to expressed enzymes in Purine metabolic pathway across different AGP treatments and diets with Day40 ceca samples. Shown here are the De novo biosynthesis and salvage pathways for purine, integrated with data generated from ceca collected at day 40. Each pie chart represents the taxonomic distributions of an enzyme (see key for color code). The size of pie charts indicates the average expression value (with log2 transform) of genes encoding that enzyme. Pie charts with red arrows refer to enzymes that are significantly up-regulated relative to the paired (+/- AGPs) sample. The abbreviations used here can be found in Supplemental Table 11.
Monte Carlo methods in continuous time for lattice Hamiltonians
Creators: name: Huffman, Emilie
Publisher: name: arXiv
Year: 2016
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We solve a variety of sign problems for models in lattice field theory using the Hamiltonian formulation, including Yukawa models and simple lattice gauge theories. The solutions emerge naturally in continuous time and use the dual representation for the bosonic fields. These solutions allow us to construct quantum Monte Carlo methods for these problems. The methods could provide an alternative approach to understanding non-perturbative dynamics of some lattice field theories.
description: 7 pages, 1 figure. Lattice 2016 proceedings
Secular resonances with Ceres and Vesta
Creators: name: Tsirvoulis, Georgios
name: Novakovic, Bojan
Publisher: name: arXiv
Year: 2016
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: In this work we explore dynamical perturbations induced by the massive asteroids Ceres and Vesta on main-belt asteroids through secular resonances. First we determine the location of the linear secular resonances with Ceres and Vesta in the main belt, using a purely numerical technique. Then we use a set of numerical simulations of fictitious asteroids to investigate the importance of these secular resonances in the orbital evolution of main-belt asteroids. We found, evaluating the magnitude of the perturbations in the proper elements of the test particles, that in some cases the strength of these secular resonances is comparable to that of known non-linear secular resonances with the giant planets. Finally we explore the asteroid families that are crossed by the secular resonances we studied, and identified several cases where the latter seem to play an important role in their post-impact evolution.
Additional file 9 of Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure
Creators: name: Zou, Angela
name: Nadeau, Kerry
name: Xiong, Xuejian
name: Wang, Pauline W.
name: Copeland, Julia K.
name: Lee, Jee Yeon
name: Pierre, James St.
name: Ty, Maxine
name: Taj, Billy
name: Brumell, John H.
name: Guttman, David S.
name: Sharif, Shayan
name: Korver, Doug
name: Parkinson, John
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 9: Supplemental Figure 9. AGPs disrupt age related changes in metabolite profiles from chicken serum. PCA of metabolomic profiles generated from either AGP+ or AGP- samples. Samples are coloured and grouped based on age of bird from which the sample was taken.
The Bi-directional Moving Structures in a Coronal Bright Point
Creators: name: Li, Dong
name: Ning, Zongjun
name: Su, Yingna
Publisher: name: arXiv
Year: 2016
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: We report the bi-directional moving structures in a coronal bright point (CBP) on 2015 July 14. It is observed by the Atmospheric Imaging Assembly (AIA) onboard Solar Dynamics Observatory (SDO). This CBP has a lifetime of about 10 minutes, and a curved shape. The observations show that many bright structures are moving intermittently outward from the CBP brightness core. Such moving structures are clearly seen at AIA 171, 193, 211, 131, 94, 335 and 304 A, slit-jaw (SJI) 1330 and 1400 A. In order to analyze these moving structures, the CBP is cut along the moving direction with a curved slit from the AIA and SJI images. Then we can obtain the time-distance slices, including the intensity and intensity-derivative diagrams, from which, the moving structures are recognized as the oblique streaks, and they are characterized by the bi-direction, simultaneity, symmetry, and periodicity. The average speed is around 300 km/s, while the typically period is about 90 s. All these features (including the bi-directional flows and their periodicity) can be detected simultaneously at all the 9 wavelengths. This CBP takes place at the site between a small pair of magnetic polarities. High time resolution observations show that they are moving close to each other during its lifetime. These facts support the magnetic reconnection model of the CBP and the bi-directional moving structures could be the observational outflows after the reconnection. Therefore, they can be as the direct observation evidence of the magnetic reconnection.
description: 13 pages, 12 figures, accepted by Ap&SS
Tunable quantum gate between a superconducting atom and a propagating microwave photon
Creators: name: Koshino, K.
name: Inomata, K.
name: Lin, Z. R.
name: Tokunaga, Y.
name: Yamamoto, T.
name: Nakamura, Y.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Quantum Physics (quant-ph)
subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: We propose a two-qubit quantum logic gate between a superconducting atom and a propagating microwave photon. The atomic qubit is encoded on its lowest two levels and the photonic qubit is encoded on its carrier frequencies. The gate operation completes deterministically upon reflection of a photon, and various two-qubit gates (SWAP, $\sqrt{\rm SWAP}$, and Identity) are realized through {\it in situ} control of the drive field. The proposed gate is applicable to construction of a network of superconducting atoms, which enables gate operations between non-neighboring atoms.
description: 8 pages, 4 figures
Multiparticle correlation expansion of relative entropy in lattice systems
Creators: name: D'Alessandro, Marco
Publisher: name: arXiv
Year: 2016
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: This paper deals with the construction of the multiparticle correlation expansion of relative entropy for lattice systems. Thanks to this analysis we are able to express the statistical distance between two systems as a series built over clusters of increasing dimension. Each addend is written in terms of correlation functions and expresses the contribution to the relative entropy due to structural information inside the selected cluster. We present a general procedure for the explicit construction of all the terms of the series. As a first application of this result, we show that the coefficients of the multiparticle correlation expansion of the excess entropy can be computed from our formula, as a particular case.
description: 15 pages
Essential Spectrum of the Weighted Laplacian on Noncompact Manifolds and Applications
Creators: name: Rocha, Adina
Publisher: name: arXiv
Year: 2016
Subjects: subject: Differential Geometry (math.DG)
subject: FOS: Mathematics
subject: 53C21, 53C42, 58J50

description: We obtain upper estimates for the bottom (that is, greatest lower bound) of the essential spectrum of weighted Laplacian operator of a weighted manifold under assumptions of the volume growth of their geodesic balls and spheres. Furthermore, we find examples where the equality occurs in the estimates obtained. As a consequence, we give estimates for the weighted mean curvature of complete noncompact hypersurfaces into weighted manifolds.
“If you were a cow, what would you want?” Findings from participatory workshops with dairy farmers
Creators: name: Mills, Katelyn E.
name: Payne, Penny
name: Saunders, Katie
name: Zobel, Gosia
Publisher: name: AgResearch
Year: 2023
Subjects: Animal welfare

description: When looking to improve animal welfare, it is essential to understand the viewpoints of stakeholders in the industry. Previous research has engaged stakeholders such as farmers, veterinarians, and the public to better understand future dairy industry directions. However, the use of perspective-taking as a tool to overcome farmer’s focus on current barriers to the industry has not been explored. Therefore, the aims of this study were to have farmers take the perspective of the cow, to elicit: (1) farm elements that are essential to create a cow-centric dairy system, and (2) how this system can be achieved in the next 50 years. To do this, we employed participatory methods (photo elicitation, timelining) to generate discussion with 12 New Zealand dairy farmers. Pasture access is frequently cited as an integral component for promoting good welfare in dairy cows, thus, this cohort of farmers was considered a good case study as they all had experience managing cows in grazing systems. Participants were asked to create a cow-centric farm design, and a pathway to implementation. Following thematic analysis of the multiple data sources, the results are presented under the following three themes: (1) cow-centric farm designs (environmental considerations, cow handling and care), (2) timeline to achieve and sequence of implementation (“low hanging fruit” and long-term investments), and (3) assumptions and resources needed (including financial considerations, technology, farmer buy-in, regulations and enforcement and other stakeholder involvement). By better understanding how current industry practice aligns, and also differs, from what the cow would want, we can work towards future management systems that incorporate the requirements of all stakeholders, including the cow. NZBIDA
Bell’s palsy or an aggressive infiltrating basaloid carcinoma post-mRNA vaccination for COVID-19? A case report and review of the literature
Creators: name: Kyriakopoulos, Anthony M.
name: Nigh, Greg
name: McCullough, Peter A.
name: Olivier, Maria D.
name: Seneff, Stephanie
Publisher: name: IfADo - Leibniz Research Centre for Working Environment and Human Factors, Dortmund
Year: 2023
Subjects: mRNA vaccines
basal cell carcinoma
Bell's palsy
exosomes
metastatic malignancy
autoimmunity

description: We report on an aggressive, infiltrating, metastatic, and ultimately lethal basaloid type of carcinoma arising shortly after an mRNA vaccination for COVID-19. The wife of the patient, since deceased, gave the consent for publishing the case. The malignancy was of cutaneous origin and the case showed symptoms consistent with Bell’s palsy and trigeminal neuralgia beginning four days post-vaccination (right side head temporal pain). The temporal pain was suggestive for inflammation and impairment of T cell immune activation. Magnetic Resonance Imaging (MRI) showed a vascular loop on the left lateral aspect of the 5th cranial root exit of cerebellopontine angle constituting presumably a normal variant and was considered as an unrelated factor to the right-sided palsy and pain symptoms that corresponded to cranial nerves V (trigeminal nerve) and VII (facial nerve). In this study we describe all aspects of this case and discuss possible causal links between the rapid emergence of this metastatic cancer and mRNA vaccination. We place this within the context of multiple immune impairments potentially related to the mRNA injections that would be expected to potentiate more aggressive presentation and progression of cancer. The type of malignancy we describe suggests a population risk for occurrence of a large variety of relatively common basaloid phenotype cancer cells, which may have the potential for metastatic disease. This can be avoidable with early diagnosis and adequate treatment. Since facial paralysis/pain is one of the more common adverse neurological events following mRNA injection, careful inspection of cutaneous/soft tissue should be conducted to rule out malignancy. An extensive literature review is carried out, in order to elucidate the toxicity of mRNA vaccination that may have led to the death of this patient. Preventive and precise routine clinical investigations can potentially avoid future mortalities.
description: EXCLI Journal; 22:Doc992; ISSN 1611-2156
Investigating Covalency in Uranyl and its Complexes via Exploration of Electronic Excited States
Creators: name: Armstrong, Sapphire
Publisher: name: Lancaster University
Year: 2022

description: Herein, computational calculation has been used to study the electronic structure and bonding of uranyl ([UO2] 2+) and its complexes at both the ground and electronically excited state geometries. The optically accessible u!u triplet excitation, allowed via spin-orbit coupling, was investigated throughout. Density Functional Theory (DFT) was used for obtaining optimised geometries and corresponding excitation energies for the transitions of interest. Application of the density based analytical tool, Quantum Theory of Atoms in Molecules (QTAIM) on the generated structures enabled rationalisation of the bonding interactions within the complexes. Here, QTAIM analysis was utilised for the first time to probe an excited state structure of an f-element complex. This became significantly important as although trends between the ground and excited state electronic structures were similar, investigation of the excited state resulted in additional findings which would not have been established by investigation of the ground state alone. Investigation of the covalency in uranyl via symmetry-preserving excited states resulted in trends between the type of covalency dependence and the orbitals involved in the excitation to be established. The covalency in the U-Oyl bond was found to decrease upon equatorial complexation, with charge being transferred onto the uranyl oxygen centres highlighting an increase in the ionic nature of the U-Oyl bond. Investigation into the electronic structure and bonding of bent uranyl complexes enabled the design of theoretical complexes, which although found to not be synthetically viable did have a significant O-U-O bend (O-U-O angle 100). Intramolecular proton transfers within uranyl hydroxide analogues were investigated as an alternative method for obtaining cis uranyl. The energy barrier was lowered in the electronic excited state for all complexes, again highlighting the significance of considering the excited state. Throughout this work, the importance of excited state investigation is established, and these results present a promising starting point for further actinide covalency investigations.
A repulsive force in the Einstein theory
Creators: name: Gorkavyi, Nick
name: Vasilkov, Alexander
Publisher: name: arXiv
Year: 2016
Subjects: subject: General Physics (physics.gen-ph)
subject: FOS: Physical sciences

description: The Laser Interferometer Gravitational-Wave Observatory (LIGO) detection of gravitational waves that take away 5 per cent of the total mass of two merging black holes points out on the importance of considering varying gravitational mass of a system in the framework of the Einstein general theory of relativity. We calculate the acceleration of a particle in the non-stationary field of a quasi-spherical system composed of a large number of objects emitting gravitational waves. It is shown that reduction of the gravitational mass of the system due to emitting gravitational waves leads to a repulsive gravitational force that diminishes with time but never disappears. This repulsive force may be related to the observed expansion of the Universe.
description: 6 pages, 2 figures, accepted in MNRAS
Managing and governing integrated research programmes: Lessons from organizational studies
Creators: name: Wever, Mark
name: Romera, Alvaro
name: Wognum, Nel
name: Shah, Syed
Publisher: name: AgResearch
Year: 2023
Subjects: Engineering
Engineering practice and education

description: To solve complex problems, researchers are increasingly working in large, integrated research programmes. Integration of projects within a single programme rather than supporting a range of individual, more autonomous projects, is supposed to lead to several benefits, including: creating and enhancing synergies amongst projects, improving collaboration and knowledge exchanges amongst researchers from different disciplines, realizing efficiency gains, and generating a higher return on investments in R&D. However, often these advantages are insufficiently realized in practice and large-scale integrated programs instead incur high overhead costs, frustrate researchers, and realize insufficient integration and collaboration. Why do integrated programmes sometimes fail to realize their lofty ambitions? In the present paper, we use the literature on governance, management studies, and organizational economics to analyse several key problems plaguing integrated programmes. We argue that these problems can be linked to the implementation of programme management systems and coordination mechanisms that are poorly aligned with the unique characteristics of integrated programmes. We develop guidelines for funding agencies and programme managers to implement systems and mechanisms that are a better fit for purpose and that enhance collaboration. NZBIDA
Topologically twisted renormalization group flow and its holographic dual
Creators: name: Nakayama, Yu
Publisher: name: arXiv
Year: 2016
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Euclidean field theories admit more general deformations than usually discussed in quantum field theories because of mixing between rotational symmetry and internal symmetry (a.k.a topological twist). Such deformations may be relevant, and if the subsequent renormalization group flow leads to a non-trivial fixed point, it generically gives rise to a scale invariant Euclidean field theory without conformal invariance. Motivated by an ansatz studied in cosmological models some time ago, we develop a holographic dual description of such renormalization group flows in the context of AdS/CFT. We argue that the non-trivial fixed points require fine-tuning of the bulk theory in general, but remarkably we find that the $O(3)$ Yang-Mills theory coupled with the four-dimensional Einstein gravity in the minimal manner supports such a background with the Euclidean AdS metric.
description: 13 pages
title: Flexible working and the division of housework and childcare: examining divisions across arrangement and occupational lines (accepted)
Creators: name: Chung, Heejung
name: Booker, Cara
Publisher: name: SAGE
Year: 2022

description: Using the UK Household Longitudinal Study we examine how flexible working is associated with the division of housework and childcare among dual-earner heterosexual couples with young children. Although flexible working may enable better work-family integration, it can also reinforce traditional divisions of domestic labour where women perform more housework and childcare. The degree to which this occurs may vary across arrangements due to differences in the flexibility and permeability of boundaries. We also expect occupational variations but in a paradoxical manner; the constraints and resources workers have may cause the associations to conflict with assumptions based on gender role attitudes. Results show that arrangements that allow more boundary blurring, such as homeworking, are associated with more traditional divisions of childcare but not necessarily of housework. Flexitime, especially for the lower-skilled/paid occupations, enables a more egalitarian division of labour, possibly because it is used to maximise households’ working hours and income.
description: Author's Accepted Manuscript
Extreme eigenvalues of an integral operator
Creators: name: Sobolev, Alexander V.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Spectral Theory (math.SP)
subject: FOS: Mathematics
subject: 45C05, 47B06 (Primary), 47A75, 45M05 (Secondary)

description: We study the family of compact operators $B_α = V A_α V$, $α>0$ in $L^2(\mathbb R^d)$, $d\ge 1$, where $A_α$ is the pseudo-differential operator with symbol $a_α(\boldsymbolξ) = a(α\boldsymbolξ)$, and both functions $a$ and $V$ are real-valued and decay at infinity. We assume that $a$ and $V$ attain their maximal values $A_0>0$, $V_0>0$, only at $\boldsymbolξ= \mathbf 0$ and $\mathbf x = \mathbf 0$. We also assume that a(\boldsymbolξ) = &\ A_0 - Ψ_γ(\boldsymbolξ) + o(|\boldsymbolξ|^γ),\ |\boldsymbolξ|\to 0, V(\mathbf x) = &\ V_0 - Φ_β(\mathbf x) + o(|\mathbf x|^β),\ |\mathbf x|\to 0, with some functions $Ψ_γ(\boldsymbolξ)>0$, $\boldsymbolξ\not =\mathbf 0$ and $Φ_β(\mathbf x) >0$, $\mathbf x\not = \mathbf 0$ that are homogeneous of degree $γ>0$ and $β>0$ respectively. The main result is the following asymptotic formula for the eigenvalues $λ_α^{(n)}$ of the operator $B_α$ (arranged in descending order counting multiplicity) for fixed $n$ and $α\to 0$: λ_α^{(n)} = A_0V_0^2 - μ^{(n)} α^σ + o(α^σ), α\to 0, where $σ^{-1} = γ^{-1}+ β^{-1}$, and $μ^{(n)}$ are the eigenvalues (arranged in ascending order counting multiplicity) of the model operator $T$ with symbol $V_0^2Ψ_γ(\boldsymbolξ) + 2A_0 V_0 Φ_β(\mathbf x)$.
description: 11 pages
Code and Data.zip
Creators: name: Liu, Yuqing
Publisher: name: figshare
Year: 2023
Subjects: classificationCode: 370402
subject: Earth and space science informatics

description: This is the code and data for the paper. The code is implemented by C++. The hardware environment is Intel Core i7 3.70GHz CPU, 16GB RAM. The running environment is Microsoft Windows 10, Clion2021.Instructions: Please enter parameters sequentially in the main function.
A conceptual breakthrough in sphere packing
Creators: name: Cohn, Henry
Publisher: name: arXiv
Year: 2016
Subjects: subject: Metric Geometry (math.MG)
subject: Number Theory (math.NT)
subject: FOS: Mathematics

description: This expository paper describes Viazovska's breakthrough solution of the sphere packing problem in eight dimensions, as well as its extension to twenty-four dimensions by Cohn, Kumar, Miller, Radchenko, and Viazovska.
description: 24 pages, 9 figures
Code and Data.zip
Creators: name: Liu, Yuqing
Publisher: name: figshare
Year: 2023
Subjects: classificationCode: 370402
subject: Earth and space science informatics

description: This is the code and data for the paper. The code is implemented by C++. The hardware environment is Intel Core i7 3.70GHz CPU, 16GB RAM. The running environment is Microsoft Windows 10, Clion2021.