cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1 of Using the theoretical domains framework to inform strategies to support dietitians undertaking body composition assessments in routine clinical care
Creators: name: Jobber, Chloe J. D.
name: Wilkinson, Shelley A.
name: Hughes, Elyssa K.
name: Nave, Fiona
name: van der Meij, Barbara S.
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 1.
Additional file 1 of Comut-viz: efficiently creating and browsing comutation plots online
Creators: name: Duan, Qiaonan
name: Wang, Weiyi
name: Feng, Feiling
name: Jiang, Xiaoqing
name: Chen, Hao
name: Zhang, Dadong
name: Zhang, Tongyi
Publisher: name: figshare
Year: 2023
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Biotechnology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Virology

description: Additional file 1. Detailed illustration of the many components of Comut-viz. The file provides detail illustration of the many components of Comut-viz in three views. It also provides a flow chart to illustrate how Comut-viz works on a high level.
Additional file 2 of Accuracy of pancreatic stone protein for the diagnosis of infection in hospitalized adults: a systematic review and individual patient level meta-analysis
Creators: name: Prazak, Josef
name: Irincheeva, Irina
name: Llewelyn, Martin J.
name: Stolz, Daiana
name: García de Guadiana Romualdo, Luis
name: Graf, Rolf
name: Reding, Theresia
name: Klein, Holger J.
name: Eggimann, Philippe
name: Que, Yok-Ai
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Additional file 2. Approved Study Protocol.
Cyber-physical risks of hacked Internet-connected vehicles
Creators: name: Vivek, Skanda
name: Yanni, David
name: Yunker, Peter J.
name: Silverberg, Jesse L.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Cryptography and Security (cs.CR)
subject: Networking and Internet Architecture (cs.NI)
subject: Physics and Society (physics.soc-ph)
subject: FOS: Computer and information sciences
subject: FOS: Physical sciences

description: The integration of automotive technology with Internet-connectivity promises to both dramatically improve transportation, while simultaneously introducing the potential for new unknown risks. Internet-connected vehicles are like digital data because they can be targeted for malicious hacking. Unlike digital data, however, Internet-connected vehicles are cyber-physical systems that physically interact with each other and their environment. As such, the extension of cybersecurity concerns into the cyber-physical domain introduces new possibilities for self-organized phenomena in traffic flow. Here, we study a scenario envisioned by cybersecurity experts leading to a large number of Internet-connected vehicles being suddenly and simultaneously disabled. We investigate post-hack traffic using agent-based simulations, and discover the critical relevance of percolation for probabilistically predicting the outcomes on a multi-lane road in the immediate aftermath of a vehicle-targeted cyber attack. We develop an analytic percolation-based model to rapidly assess road conditions given the density of disabled vehicles and apply it to study the street network of Manhattan (NY, USA) revealing the city's vulnerability to this particular cyber-physical attack.
description: 11 pages, 4 figures
Additional file 1 of Accuracy of pancreatic stone protein for the diagnosis of infection in hospitalized adults: a systematic review and individual patient level meta-analysis
Creators: name: Prazak, Josef
name: Irincheeva, Irina
name: Llewelyn, Martin J.
name: Stolz, Daiana
name: García de Guadiana Romualdo, Luis
name: Graf, Rolf
name: Reding, Theresia
name: Klein, Holger J.
name: Eggimann, Philippe
name: Que, Yok-Ai
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Additional file 1. Supplemental Tables.
Quality Control, Testing and Deployment Results in NIF ICCS
Creators: name: Woodruff, John P.
name: Casavant, Drew D.
name: Cline, Barry D.
name: Gorvad, Michael R.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Software Engineering (cs.SE)
subject: FOS: Computer and information sciences
subject: D.2.9

description: The strategy used to develop the NIF Integrated Computer Control System (ICCS) calls for incremental cycles of construction and formal test to deliver a total of 1 million lines of code. Each incremental release takes four to six months to implement specific functionality and culminates when offline tests conducted in the ICCS Integration and Test Facility verify functional, performance, and interface requirements. Tests are then repeated on line to confirm integrated operation in dedicated laser laboratories or ultimately in the NIF. Test incidents along with other change requests are recorded and tracked to closure by the software change control board (SCCB). Annual independent audits advise management on software process improvements. Extensive experience has been gained by integrating controls in the prototype laser preamplifier laboratory. The control system installed in the preamplifier lab contains five of the ten planned supervisory subsystems and seven of sixteen planned front-end processors (FEPs). Beam alignment, timing, diagnosis and laser pulse amplification up to 20 joules was tested through an automated series of shots. Other laboratories have provided integrated testing of six additional FEPs. Process measurements including earned-value, product size, and defect densities provide software project controls and generate confidence that the control system will be successfully deployed.
description: Submitted to ICALEPCS 2001
Elaphropeza kranjiensis , Grootaert & Shamshev 2012
Creators: name: Grootaert, Patrick
name: Shamshev, Igor
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Hybotidae
Elaphropeza
Elaphropeza kranjiensis

description: Elaphropeza kranjiensis, Grootaert & Shamshev, 2012
(Figs. 20, 21)
 E. kranjiensis Grootaert & Shamshev, 2012: 109 (male, figs 165–168). Type locality: Singapore, Kranji Nature trail.
 Material examined. Singapore: Semakau Island, 1 female, SMN1, 16 May 2013, mangrove, (reg. 29920, Ma 7006); 1 male, SMN3, 13 June 2013, mangrove, (reg. 29974, Ma 7050); 1 male, SMN3, 24 October 2013, mangrove, (reg. 30221, Ma 7967); 1 male, SMN1, 28 November 2013, mangrove, (reg. 30284, Ma 8035); Sungei Buloh, 1 male, SB1, 19 March 2014, mangrove, (reg. 30488, Ma 8883).
 Diagnosis. Species of the E. ephippiata group; recognised by reddish yellow thorax, scutum brown laterally, scutellum, metanotum, hypopleuron and metapleuron brown; antenna brownish yellow, postpedicel about 2.5 times longer than wide; legs with tibiae yellowish brown, tarsomere 5 brown; haltere brown.
 Description. Length: wing 2.8 mm.
Female (described for the first time): Similar to male except sexual differences (Grootaert & Shamshev, 2012: 109, Figs. 165–168). Gland-like structure between abdominal tergites 4–5 absent; tergite 7 with short posteromarginal setae; segment 8 rather short, broad, yellowish brown, with separated tergite and sternite; tergite 10 narrowly separated along mid line, fused with sternite 10. Cercus small, yellowish brown, with scattered short setae.
 Distribution. Singapore.
description: Published as part of Grootaert, Patrick & Shamshev, Igor, 2015, New species of fast-running flies (Diptera: Empidoidea, Hybotidae, Tachydromiinae) from mangroves in Singapore, pp. 583-609 in Raffles Bulletin of Zoology 63 on page 595, DOI: 10.5281/zenodo.5386822
The Environmental Dependence of the Infrared Luminosity and Stellar Mass Functions
Creators: name: Balogh, Michael
name: Christlein, Daniel
name: Zabludoff, Ann
name: Zaritsky, Dennis
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We investigate the dependence of the galaxy infrared luminosity function (LF) and the associated stellar mass function (SMF) on environment and spectral type using photometry from the Two Micron All Sky Survey and redshifts from the Las Campanas Redshift Survey for galaxies brighter than M_J
description: 14 pages, 13 figures, emulateapj style ApJ, post-referee. Very minor changes, mostly typographical in nature
Additional file 1: of Adult and iPS-derived non-parenchymal cells regulate liver organoid development through differential modulation of Wnt and TGF-Î˛
Creators: name: Goulart, Ernesto
name: Luiz Caires-Junior
name: Kayque Telles-Silva
name: Araujo, Bruno
name: Kobayashi, Gerson
name: Musso, Camila
name: Assoni, Amanda
name: Danyllo Oliveira
name: Caldini, Elia
name: Gerstenhaber, Jonathan
name: Raia, Silvano
name: Lelkes, Peter
name: Mayana Zatz
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Supplementary tables, methods, and figures (DOCX 1729 kb)
Big Bang Nucleosynthesis, Cosmic Microwave Background Anisotropies and Dark Energy
Creators: name: Signore, M.
name: Puy, D.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Over the last decade, cosmological observations have attained a level of precision which allows for very detailed comparison with theoretical predictions. We are beginning to learn the answers to some fundamental questions, using information contained in Cosmic Microwave Background Anisotropy (CMBA) data. In this talk, we briefly review some studies of the current and prospected constraints imposed by CMBA measurements on the neutrino physics and on the dark energy. As it was already announced by Scott (1999), we present some possible "new physics" from the Cosmic Microwave Background.
description: 11 pages, 5 figures, Talk given at 2K1BC Workshop, July 9-12, 2001, Breuil-Cervinia (Italy)
Spin-polarized states of nuclear matter
Creators: name: Zuo, W.
name: Lombardo, U.
name: Shen, C. W.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: The equations of state of spin-polarized nuclear matter and pure neutron matter are studied in the framework of the Brueckner-Hartree-Fock theory including a three-body force. The energy per nucleon $E_A(δ)$ calculated in the full range of spin polarization $δ = \frac{ρ_{\uparrow}-ρ_{\downarrow}}ρ$ for symmetric nuclear matter and pure neutron matter fulfills a parabolic law. In both cases the spin-symmetry energy is calculated as a function of the baryonic density along with the related quantities such as the magnetic susceptibility and the Landau parameter $G_0$. The main effect of the three-body force is to strongly reduce the degenerate Fermi gas magnetic susceptibility even more than the value with only two body force. The EOS is monotonically increasing with the density for all spin-aligned configurations studied here so that no any signature is found for a spontaneous transition to a ferromagnetic state.
description: Contribution to GISELDA Meeting, 14-18 January, 2002 (Frascati), to appear in World Scientific (Singapore)
Visual DCT - Visual EPICS Database Configuration Tool
Creators: name: Sekoranja, M.
name: Hunt, S.
name: Luedeke, A.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Software Engineering (cs.SE)
subject: FOS: Computer and information sciences
subject: K.8.1

description: Visual DCT is an EPICS configuration tool completely written in Java and therefore supported in various systems. It was developed to provide features missing in existing configuration tools as Capfast and GDCT. Visually Visual DCT resembles GDCT - records can be created, moved and linked, fields and links can be easily modified. But Visual DCT offers more: using groups, records can be grouped together in a logical block, which allows a hierarchical design. Additionally indication of data flow direction using arrows makes the design easier to understand. Visual DCT has a powerful DB parser, which allows importing existing DB and DBD files. Output file is also DB file, all comments and record order is preserved and visual data saved as comment, which allows DBs to be edited in other tools or manually. Great effort has been taken and many tricks used to optimize the performance in order to compensate for the fact that Java is an interpreted language.
description: ICALEPCS 2001, THAP029
Chemical Evolution of Bulges
Creators: name: Molla, Mercedes
name: Ferrini, Federico
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We show our results from the application of the Multiphase chemical evolution model to a set of Bulges of spiral galaxies
description: 1 pag, contribution to the Euroconference "The Evolution of Galaxies. I. Observational Clues"
Antarctobiotus koenigi
Creators: name: Pugh, P. J. A.
name: Dartnall, H. J. G.
name: McInnes, S. J.
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Hexanauplia
Harpacticoida
Canthocamptidae
Antarctobiotus
Antarctobiotus koenigi

description: Antarctobiotu s koenigi (Pesta, 1928)
 Atthyella (Canthocamptus) Koenigi Pesta, 1928; Antarctobiotus Konigi (sic: Brehm, 1954).
Description: Pesta (1928). Listed in: Chappuis (1940b); Brehm (1954); Borutskii (1952); Smith and Sayers (1971); Lewis (1972a).
Recorded from: freshwater lakes and/or pools.
Location: South Georgia.
description: Published as part of Pugh, P. J. A., Dartnall, H. J. G. & McInnes, S. J., 2002, The non-marine Crustacea of Antarctica and the Islands of the Southern Ocean: biodiversity and biogeography, pp. 1047-1103 in Journal of Natural History 36 (9) on page 1062, DOI: 10.1080/00222930110039602, http://zenodo.org/record/5300993
Additional file 1: of RNASeq analysis of giant cane reveals the leaf transcriptome dynamics under long-term salt stress
Creators: name: Sicilia, Angelo
name: Testa, Giorgio
name: Santoro, Danilo
name: Cosentino, Salvatore
name: Piero, Angela Lo
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Inorganic Chemistry
subject: Science Policy

description: Figure S1. Effect of salt stress upon G2, G18 and G20 ecotype morpho-biometric and physiological parameters. . a Leaf number per pot. b Stem number per pot. c Main stem height. d SPAD. e Net photosynthesis. f Dry biomass (PDF 97 kb)
Exo-planet detection with the COROT space mission. I. A multi-transit detection criterion
Creators: name: Borde', Pascal
name: Rouan, Daniel
name: Leger, Alain
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present a detection criterion for exo-planets to be used with the space mission COROT. This criterion is based on the transit method, which suggests the observation of star dimming caused by partial occulations by planetary companions. When at least three transits are observed, we show that a cross-correlation technique can yield a detection threshold, thus enabling the evaluation of the number of possible detections, assuming a model for the stellar population in the Galaxy.
description: 7 pages, 4 figures
Additional file 1 of Impact of influenza virus infection on lung microbiome in adults with severe pneumonia
Creators: name: Zhou, Yiguo
name: Du, Juan
name: Wu, Jing-Qin
name: Zhu, Quan-Rong
name: Xie, Ming-Zhu
name: Chen, Lin-Yi
name: Liu, Ya-Qiong
name: Li, Wei
name: Zhou, Ting-Fa
name: Lu, Qing-Bin
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Ecology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Additional file 1. Table S1: Primers and sequence information for PCR used to characterize respiratory viruses. Table S2: Primers, probes and sequence information for PCR used to characterize respiratory bacteria. Fig. S1: Valid tags and OTUs obtained from samples. OUT, operational taxonomic unit. Fig. S2: Top 30 genera (A) and species (B) of bacteria in relative abundance among all the samples. Table S3: Bacteria of statistically significant difference between IFVP group and IFVN group at the genus level. Table S4: Bacteria of statistically significant difference between IFVP group and IFVN group at the species level.
Facilitating Bayesian Continual Learning by Natural Gradients and Stein Gradients
Creators: name: Chen, Yu
name: Diethe, Tom
name: Lawrence, Neil
Publisher: name: arXiv
Year: 2019
Subjects: subject: Machine Learning (cs.LG)
subject: Artificial Intelligence (cs.AI)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: Continual learning aims to enable machine learning models to learn a general solution space for past and future tasks in a sequential manner. Conventional models tend to forget the knowledge of previous tasks while learning a new task, a phenomenon known as catastrophic forgetting. When using Bayesian models in continual learning, knowledge from previous tasks can be retained in two ways: 1). posterior distributions over the parameters, containing the knowledge gained from inference in previous tasks, which then serve as the priors for the following task; 2). coresets, containing knowledge of data distributions of previous tasks. Here, we show that Bayesian continual learning can be facilitated in terms of these two means through the use of natural gradients and Stein gradients respectively.
Nonmesonic weak decay of light hypernuclei with coherent $Σ$ mixing
Creators: name: Sasaki, K.
name: Inoue, T.
name: Oka, M.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: Nonmesonic weak decays of the A=4, and 5 hypernuclei are studied. The short range parts of the hyperon-nucleon weak interactions are described by the direct quark (DQ) weak transition potential, while the longer range interactions are given by the $π$ and $K$ meson exchange processes. Virtual $Σ$ mixings of the coherent type are found to give significant effects on the decay rates of $^4_Λ{\rm He}$. A large violation of the $ΔI = 1/2$ rule is predicted in the J=0 transition amplitudes.
description: 17 pages, 2 figures
Additional file 1 of Effects of a computerised guideline support tool on child healthcare professionalsâ response to suspicions of child abuse and neglect: a community-based intervention trial
Creators: name: Konijnendijk, Annemieke
name: Boere-Boonekamp, Magda
name: Haasnoot, Maria
name: Need, Ariana
Publisher: name: figshare
Year: 2019
Subjects: subject: Neuroscience
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: : Questionnaires for the intervention and control groups. (DOCX 36 kb)
Additional file 1 of Binocular summation of visual acuity and contrast sensitivity in children with intermittent exotropia
Creators: name: Liao, Jun
name: Li, Yueping
name: Zhang, Wei
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology

description: Additional file 1: Supplementary Table 1. The raw measurements for the 21 individuals.
Podocopida Sars 1866
Creators: name: Pugh, P. J. A.
name: Dartnall, H. J. G.
name: McInnes, S. J.
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Ostracoda
Podocopida

description: OrderPODOCOPIDA Sars, 1866   Unknown # 1 (Studer, 1878)   Recorded from: freshwater lakes and/or pools.
Location: Îles Kerguelen.
 Note. Record probably refers to one of the following species. Not listed in table 2.
description: Published as part of Pugh, P. J. A., Dartnall, H. J. G. & McInnes, S. J., 2002, The non-marine Crustacea of Antarctica and the Islands of the Southern Ocean: biodiversity and biogeography, pp. 1047-1103 in Journal of Natural History 36 (9) on page 1066, DOI: 10.1080/00222930110039602, http://zenodo.org/record/5300993
Additional file 3: of Stable prevalence of chronic back disorders across gender, age, residence, and physical activity in Canadian adults from 2007 to 2014
Creators: name: Angarita-Fonseca, Adriana
name: Trask, Catherine
name: Tayyab Shah
name: Bath, Brenna
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: Developmental Biology

description: Pairwise comparison of trend data using the test of parallelism. (DOCX 24 kb)
A Robotic Wide-Angle H-Alpha Survey of the Southern Sky
Creators: name: Gaustad, J. E.
name: McCullough, P. R.
name: Rosing, W.
name: Van Buren, D.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We have completed a robotic wide-angle imaging survey of the southern sky (declination less than +15 degrees) at 656.3 nm wavelength, the H-alpha emission line of hydrogen. Each image of the resulting Southern H-Alpha Sky Survey Atlas (SHASSA) covers an area of the sky 13 degrees square at an angular resolution of approximately 0.8 arcminute, and reaches a sensitivity level of 2 rayleigh (1.2 x 10^-17 erg cm^-2 s^-1 arcsec^-2) per pixel, corresponding to an emission measure of 4 cm^-6 pc, and to a brightness temperature for microwave free-free emission of 12 microkelvins at 30 GHz. Smoothing over several pixels allows features as faint as 0.5 rayleigh to be detected.
description: LATEX, 33 pages, 15 figures. Accepted for publication in PASP, 113, November 2001. Further information at http://amundsen.swarthmore.edu/SHASSA/
Additional file 1 of Genome-based selection and application of food-grade microbes for chickpea milk fermentation towards increased l-lysine content, elimination of indigestible sugars, and improved flavour
Creators: name: Tangyu, Muzi
name: Fritz, Michel
name: Aragao-Börner, Rosa
name: Ye, Lijuan
name: Bogicevic, Biljana
name: Bolten, Christoph J.
name: Wittmann, Christoph
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Table S1. Growth conditions and media used to pre-culture the different strains. Table S2. Microbial growth during chickpea milk fermentation. The data are given as (colony forming units) mL-1. n=3. Table S3. The number of locus in B. amyloliquefaciens NCC 156 and L. paracasei subsp. paracasei NCC 2511 encoding functional enzymes invoving in flavor formation,pyruvate, and butanoate metabolism. Table S4. The number of locus in B. amyloliquefaciens NCC 156 and L. paracasei subsp. paracasei NCC 2511 encoding functional enzymes invoving in carbohydrate degradation and citrate metabolism. Fig. S1. Pre-treatment strategies for the processing of chickpea flour suspensions prior to microbial fermentation. Phase separation for the untreated milk (A), contamination of non-inoculated milk after pasteurization (63°C, 5 h) (B), gelation and phase separation after stronger heating (90°C, 30 min) (C), gelation and phase separation after autoclaving (121°C, 15 min), generation of homogeneous and sterile suspension after a two-step treatment that included combined heating and stirring (2 h, 75°C, 250 rpm) and autoclaving (121 °C, 15 min) (E). The sterility of pasteurized milk (A) and two-step treated milk (D), was evaluated by non-inoculated incubation for 48 h at 37°C. Fig. S2. Genomic repertoire of food-grade microbes linked to l-lysine metabolism: pathways for l-lysine biosynthesis (LSP), pathways competing with l-lysine biosynthesis for carbon precursors (PCP), and pathways for l-lysine degradation (LDP). The presence (yellow) and absence (blue) of corresponding key genes (Fig. 1) is indicated by colour.
Group-theoretic classification of superconducting states of Strontium Ruthenate
Creators: name: Kaba, S. -O.
name: Sénéchal, D.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: The possible superconducting states of strontium ruthenate (Sr$_2$RuO$_4$) are organized into irreducible representations of the point group $D_{4h}$, with a special emphasis on nodes occurring within the superconducting gap. Our analysis covers the cases with and without spin-orbit coupling and takes into account the possibility of inter-orbital pairing within a three-band, tight-binding description of Sr$_2$RuO$_4$. No dynamical treatment if performed: we are confining ourselves to a group-theoretical analysis. The case of uniaxial deformations, under which the point group symmetry is reduced to $D_{2h}$, is also covered. It turns out that nodal lines, in particular equatorial nodal lines, occur in most representations. We also highlight some results specific to multiorbital superconductivity. Among other things, we find that odd inter-orbital pairing allows to combine singlet and triplet superconductivity whithin the same irreducible representation, that pure inter-orbital superconductivity leads to nodal surfaces and that the notion of nodes imposed by symmetry is not clearly defined.
description: 16 pages, 6 figures
Additional file 2: of Stable prevalence of chronic back disorders across gender, age, residence, and physical activity in Canadian adults from 2007 to 2014
Creators: name: Angarita-Fonseca, Adriana
name: Trask, Catherine
name: Tayyab Shah
name: Bath, Brenna
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Cancer

description: Overall and specific crude prevalence of CBD and joinpoint regression analysis. Canadian Community Health Survey, 2007â 2014. (DOCX 28 kb)
Mechanisms behind slow photo-response character of Pulsed Electron Deposited ZnO thin films
Creators: name: Ozdogan, Mehmet
name: Utlu, Gokhan
name: Celebi, Cem
Publisher: name: arXiv
Year: 2019
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Applied Physics (physics.app-ph)
subject: FOS: Physical sciences

description: Zinc Oxide (ZnO) semiconductor is ideal candidates for ultra-violet (UV) photodetector due to its promising optoelectronic properties. Photodetectors based on ZnO nanostructures show very high photoconductivity under UV light, but they are plagued by slow photo-response time as slow as several tens of hours, even more. Most of the studies claimed that atmospheric adsorbates such as water and oxygen create charge traps states on the surface and remarkably increase both the photoconductivity and response time, but there are also limited studies that claiming the defect induced states acting as hole trap centers responsible for these problems. However, the underlying physical mechanism is still unclear. Here we study the effects of both adsorbates and defect-related states on the photo-response character of Pulsed Electron Deposited ZnO thin films. In order to distinguish between these two mechanisms, we have compared the time-dependent photo-response measurements of bare-ZnO and SiO2 encapsulated-ZnO thin film samples taken under UV light and high vacuum. We show that the dominant mechanism of photo-response in ZnO is the adsorption/desorption of oxygen and water molecules even when the measurement is performed in high vacuum. When the samples are encapsulated by a thin SiO2 layer, the adsorption/desorption rates can significantly improve, and the effects of these molecules partially removed.
description: 19 pages, 5 figures
Additional file 2 of Screening of key functional components of Taohong Siwu Decoction on ischemic stroke treatment based on multiobjective optimization approach and experimental validation
Creators: name: Xu, Anqi
name: Li, Wenxing
name: Cai, Jieqi
name: Wen, Zhuohua
name: Wang, Kexin
name: Chen, Yupeng
name: Li, Xifeng
name: Guan, Daogang
name: Duan, Chuanzhi
Publisher: name: figshare
Year: 2023
Subjects: Biochemistry
Medicine
Neuroscience
Pharmacology
Biotechnology
Chemical Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Information Systems not elsewhere classified

description: Additional file 2.
Low momentum nucleon-nucleon potentials with half-on-shell T-matrix equivalence
Creators: name: Bogner, Scott
name: Kuo, T. T. S.
name: Coraggio, L.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We study a method by which realistic nucleon-nucleon potentials V_NN can be reduced, in a physically equivalent way, to an effective low-momentum potential V-low-k confined within a cut-off momentum k-cut. Our effective potential is obtained using the folded-diagram method of Kuo, Lee and Ratcliff, and it is shown to preserve the half-on-shell T-matrix. Both the Andreozzi-Lee-Suzuki and the Andreozzi-Krenciglowa-Kuo iteration methods have been employed in carrying out the reduction. Calculations have been performed for the Bonn A and Paris NN potentials, using various choices for k-cut such as 2 fm-1. The deuteron binding energy, low-energy NN phase shifts, and the low-momentum half-on-shell T-matrix given by V_NN are all accurately reproduced by V-low-k. Possible applications of V-low-k directly to nuclear matter and nuclear structure calculations are discussed.
description: 5 pages, 2 figures, talk presented by TTSK at FB16 International Conference, Taipei, Taiwan March 6-10, 2000
Hierarchical Particle-Mesh: an FFT-accelerated Fast Multipole Method
Creators: name: Gnedin, Nickolay Y.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Computational Physics (physics.comp-ph)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: I describe a modification to the original Fast Multipole Method (FMM) of Greengard & Rokhlin that approximates the gravitation field of an FMM cell as a small uniform grid (a "gridlet") of effective masses. The effective masses on a gridlet are set from the requirement that the multipole moments of the FMM cells are reproduced exactly, hence preserving the accuracy of the gravitational field representation. The calculation of the gravitational field from a multipole expansion can then be computed for all multipole orders simultaneously, with a single Fast Fourier Transform, significantly reducing the computational cost at a given value of the required accuracy. The described approach belongs to the class of "kernel independent" variants of the FMM method and works with any Green function.
description: Accepted for publication in the ApJ
Heuristics for Transmission Expansion Planning in Low-Carbon Energy System Models
Creators: name: Neumann, Fabian
name: Brown, Tom
Publisher: name: arXiv
Year: 2019
Subjects: subject: Optimization and Control (math.OC)
subject: Physics and Society (physics.soc-ph)
subject: FOS: Mathematics
subject: FOS: Physical sciences

description: Governments across the world are planning to increase the share of renewables in their energy systems. The siting of new wind and solar power plants requires close coordination with grid planning, and hence co-optimization of investment in generation and transmission expansion in spatially and temporally resolved models is an indispensable but complex problem. Particularly considerations of transmission expansion planning (TEP) add to the problem's complexity. Even if the power flow equations are linearized, the optimization problem is still bilinear and mixed-integer due to the dependence of line expansion on line impedance and a discrete set of line expansion options. While it is possible to linearize this mixed-integer nonlinear program (MINLP) by applying a big-M disjunctive relaxation, the resulting MILP is still hard to solve using state-of-the-art solvers for large-scale energy system models. In this paper we therefore develop heuristics to incorporate integer transmission expansion and responsive line impedances in energy system models, while retaining the lower computational effort of continuous linear programming (LP) by applying sequential linear programming (SLP) techniques, relaxation and discretization approaches. We benchmark their performance against the results of the exact formulation for a policy-relevant case study of the German transmission system in terms of their speed-up in computation time, deviation from optimal total system cost, and similarity of line expansion. Using heuristics we reduce computation times of joint generation and transmission optimisation by 82% with a maximal total system cost deviation of only 1.5%. The heuristics closely mirror optimal integer line investment of the exact MINLP with considerable time savings for policy-relevant low-carbon energy system optimization models.
description: 8 pages, 7 figures, conference, EEM 2019
Additional file 1 of Whole consultation simulation in undergraduate surgical education: a breast clinic case study
Creators: name: Lee, Alice
name: Abdulhussein, Dalia
name: Fallaha, Mohammad
name: Buckeldee, Olivia
name: Morrice, Rory
name: Leedham-Green, Kathleen
Publisher: name: figshare
Year: 2021
Subjects: subject: Space Science
subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Computational Biology

description: Additional file 1: Table S1. Example of feedback form given to students based on patient-centred outcomes, filled in by the simulated ‘patient’. Table S2. Example of feedback form given to students based on clinical outcomes, filled in by the tutor facilitating the station. Table S3. Anonymised transcripts from the sessions held in November 2019 and January 2020. The students were debriefed in two groups, hence two transcripts per session.
Candonopsis falklandica Vavra 1898
Creators: name: Pugh, P. J. A.
name: Dartnall, H. J. G.
name: McInnes, S. J.
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Ostracoda
Podocopida
Candonidae
Candonopsis
Candonopsis falklandica

description: Candonopsis falklandica Vávra, 1898
Listed in: Ringulet (1955); Smith and Sayers (1971).
Recorded from: freshwater lakes and/or pools.
Location: Falkland Is.
 Family CYPRIDIDAE Baird, 1845 5 Cypridae of authors sensu Bowman and Abele (1982).
description: Published as part of Pugh, P. J. A., Dartnall, H. J. G. & McInnes, S. J., 2002, The non-marine Crustacea of Antarctica and the Islands of the Southern Ocean: biodiversity and biogeography, pp. 1047-1103 in Journal of Natural History 36 (9) on page 1067, DOI: 10.1080/00222930110039602, http://zenodo.org/record/5300993
Stilpon Loew 1859
Creators: name: Grootaert, Patrick
name: Shamshev, Igor
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Hybotidae
Stilpon

description: Genus Stilpon Loew, 1859
 Agatachys Meigen, 1830: 343 (as MS name “ Agatachys flavipes ” of Winthem). Type-species: Tachydromia celeripes Meigen, 1830 (= T. graminum Fallén, 1815) [designation by Coquillett, 1910: 504], by monotypy. Suppressed by the ICZN. (1997: 200 [Opinion 1881]), the history was laid out by Cumming & Evenhuis (1996).
 Stilpon Loew, 1859: 34 (as subgenus of Drapetis Meigen). Typespecies: Tachydromia graminum Fallén, 1815, by subsequent designation Loew, 1864: 5).
 Tetraneurella Dahl, 1909: 362. Type-species: T. beckeri Dahl, 1909 [= Stilpon graminum (Fallén, 1815)], by monotypy.
 Pseudostilpon Séguy, 1950: 83. Type-species: Tachydromia paludosa Perris, 1852, by original designation
description: Published as part of Grootaert, Patrick & Shamshev, Igor, 2015, New species of fast-running flies (Diptera: Empidoidea, Hybotidae, Tachydromiinae) from mangroves in Singapore, pp. 583-609 in Raffles Bulletin of Zoology 63 on page 607, DOI: 10.5281/zenodo.5386822
Additional file 1: of Stable prevalence of chronic back disorders across gender, age, residence, and physical activity in Canadian adults from 2007 to 2014
Creators: name: Angarita-Fonseca, Adriana
name: Trask, Catherine
name: Tayyab Shah
name: Bath, Brenna
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Cancer

description: Overall and specific age-standardized prevalence of CBD and joinpoint regression analysis. Canadian Community Health Survey, 2007â 2014. (DOCX 26 kb)
Application Software Structure Enables Nif Operations Kirby W. Fong
Creators: name: Fong, Kirby W.
name: Estes, Christopher M.
name: Fisher, John M.
name: Shelton, Randy T.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Software Engineering (cs.SE)
subject: FOS: Computer and information sciences
subject: D.2.11

description: The NIF Integrated Computer Control System (ICCS) application software uses a set of service frameworks that assures uniform behavior spanning the front-end processors (FEPs) and supervisor programs. This uniformity is visible both in the way each program employs shared services and in the flexibility it affords for attaching graphical user interfaces (GUIs). Uniformity of structure across applications is desired for the benefit of programmers who will be maintaining the many programs that constitute the ICCS. In this paper, the framework components that have the greatest impact on the application structure are discussed.
description: 3 pages, 1 figure, ICALEPCS 2001 Conference
Equation of State for Cosmological Matter at and beyond QCD and Electroweak Eras
Creators: name: Tawfik, Abdel Nasser
name: Mishustin, Igor
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: Various thermodynamic quantities for baryon-free matter are calculated by combining the most reliable non-perturbative and perturbative calculations, especially the most recent ones including as many quark flavors as possible. We extend these calculations by including other degrees of freedom (dof), such as photons, neutrinos, leptons, electroweak particles, and Higgs bosons, that allows us to consider the temperatures up to the TeV-scale. The calculations show that similar to QCD, the EW phase transition is also a crossover. We have found that while the equation of state for the hadronic matter is linear, $p/ρ\simeq 0.2$, the one for higher temperatures is rather complex; it exhibits two crossover-type phase transitions, corresponding to strong and EW matter. At even larger energy densities, the deduced EoS becomes linear again and close to ideal gas. The combined equation of state can be used for modeling the expansion of the Universe from very early times and through the EW and QCD era.
description: 17 pages, 4 figures, submitted to PRD
title: Method and theory of archaeological spatio-temporal analysis
Creators: name: Cowie, Douglas James
Publisher: name: University of Southampton
Year: 2018

description: Much has been written about spatial analysis, temporal analysis and spatio-temporal analysis of archaeological material. The methods and theories of spatial analysis are a well trodden path, with considerable literature. The methods and theories of temporal analysis are less copious, although there is still a not insignificant quantity of research, weighted slightly more toward the theory than the method. Spatio-temporal analysis can not stake a claim in both of these traditions, it is not the union, but the intersection. Such analysis is required to consider both the spatial and the temporal dimension of the material being analysed.

This thesis evaluates the status quo of the methods and theories of spatio-temporal analysis. It examines current approaches to spatio-temporal analysis through the essential components of theory, method and tools. Following this are two case studies, of very different scales of data set and analysis, drawing on different intellectual traditions within archaeology.

The first study, of Hambledon Hill, demonstrates the application of spatio-temporal analysis to a single site, by enhancing the bayesian modelling of the dates. The second study, of the spread of the Neolithic across central and western Europe, takes a continental scale data set and suggests new spatio-temporal methods of analysis.

All archaeological data, sites and processes operate over both space and time, it is therefore inherently a spatio-temporal discipline. Only through combined analysis can such resources be fully analysed, their full potential to tell us about the past revealed. This thesis identifies the complexities and limitations with current approaches for such combined analysis. It offers instead extensions to existing methods and novel forms of spatio-temporal analysis. It demonstrates that such analysis is equally applicable to small and large scale studies and is not the preserve of individual intellectual traditions.

This thesis is about getting the most out of archaeological data.
Additional file 1 of Decision making in the end-of-life care of patients who are terminally ill with cancer – a qualitative descriptive study with a phenomenological approach from the experience of healthcare workers
Creators: name: Luna-Meza, Angela
name: Godoy-Casasbuenas, Natalia
name: Calvache, José Andrés
name: Díaz-Amado, Eduardo
name: Gempeler Rueda, Fritz E.
name: Morales, Olga
name: Leal, Fabian
name: Gómez-Restrepo, Carlos
name: de Vries, Esther
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Cell Biology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy

description: Additional file 1: Supplementary Table 1. Interview guide.
Morphological properties of 2D symmetric Airy beams extracted from the stationary wave approximation
Creators: name: Camas-Aquino, F.
name: Quinto-Su, P. A.
name: Jáuregui, R.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: We explore the morphological properties of symmetric Airy beams in the paraxial and nonparaxial regimes. We consider a 2D electromagnetic realization with a single transverse component of the electric field, and in the nonparaxial regime, the longitudinal component along the optic axis. The general structure of these beams is analyzed with the combination of several approaches: geometrical optics through the use of caustics, the asymptotic wave properties of the light field using the stationary wave approximation and numerical integration. The geometrical optics approach involves locating the critical points that are later used in the stationary phase approximation. In the paraxial regime the highest order of the roots is 3, while in the nonparaxial regime, the order can be of up to 6. The technique yields conditions to identify interesting features on the beam, like the number of waves interfering constructively/destructively at the critical positions. The results are confirmed by the numerical simulations. In this way it is possible to distinguish and classify phase singularities like optical vortices and dislocations. The developed algorithm could be used to study any structured light field.
description: 10 pages, 18 figures
Additional file 1 of Awareness about FDA announcement on voluntary recall of ranitidine among physicians and pharmacists in and around Chennai, India: a cross-sectional study
Creators: name: Begam, Rukaiah Fatma
name: Ravikumar, Yamuna
name: Velmurugan, Ramaiyan
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1. Questionnaire.
Larger than 80$\,$% Valley Polarization of Free Carriers in Singly-Oriented Single Layer WS$_2$ on Au(111)
Creators: name: Beyer, H.
name: Rohde, G.
name: Čabo, A. Grubišić
name: Stange, A.
name: Jacobsen, T.
name: Bignardi, L.
name: Lizzit, D.
name: Lacovig, P.
name: Sanders, C. E.
name: Lizzit, S.
name: Rossnagel, K.
name: Hofmann, P.
name: Bauer, M.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: We employ time- and angle-resolved photoemission spectroscopy to study the spin- and valley-selective photoexcitation and dynamics of free carriers at the K and K' points in singly-oriented single layer WS$_2$/Au(111). Our results reveal that in the valence band maximum an ultimate valley polarization of free holes of 84$\,$% can be achieved upon excitation with circularly polarized light at room temperature. Notably, we observe a significantly smaller valley polarization for the photoexcited free electrons in the conduction band minimum. Clear differences in the carrier dynamics between electrons and holes imply intervalley scattering processes into dark states being responsible for the efficient depolarization of the excited electron population.
description: 13 pages, 7 figures
Abelian ideals in a Borel subalgebra of a complex simple Lie algebra
Creators: name: Suter, Ruedi
Publisher: name: arXiv
Year: 2002
Subjects: subject: Representation Theory (math.RT)
subject: Combinatorics (math.CO)
subject: FOS: Mathematics
subject: 17B20; 20F55

description: Let g be a complex simple Lie algebra and b a fixed Borel subalgebra of g. We shall describe the abelian ideals of b in a uniform way, that is, independent of the classification of complex simple Lie algebras.
description: 43 pages, LaTeX2e, youngtab.sty
Newnhamia patagonica
Creators: name: Pugh, P. J. A.
name: Dartnall, H. J. G.
name: McInnes, S. J.
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Ostracoda
Podocopida
Notodromadidae
Newnhamia
Newnhamia patagonica

description: Newnhamia patagonica
Recorded from: ponds.
New record: Falkland Is. (Dartnall, personal observation), [S. America?].
description: Published as part of Pugh, P. J. A., Dartnall, H. J. G. & McInnes, S. J., 2002, The non-marine Crustacea of Antarctica and the Islands of the Southern Ocean: biodiversity and biogeography, pp. 1047-1103 in Journal of Natural History 36 (9) on page 1068, DOI: 10.1080/00222930110039602, http://zenodo.org/record/5300993