cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Scientific Exploration of Challenging Planetary Analog Environments with a Team of Legged Robots
Creators: name: Arm, Philip
name: Waibel, Gabriel
name: Preisig, Jan
name: Tuna, Turcan
name: Zhou, Ruyi
name: Bickel, Valentin
name: Ligeza, Gabriela
name: Miki, Takahiro
name: Kehl, Florian
name: Kolvenbach, Hendrik
name: Hutter, Marco
Publisher: name: arXiv
Year: 2023
Subjects: subject: Robotics (cs.RO)
subject: Systems and Control (eess.SY)
subject: FOS: Computer and information sciences
subject: FOS: Electrical engineering, electronic engineering, information engineering

description: The interest in exploring planetary bodies for scientific investigation and in-situ resource utilization is ever-rising. Yet, many sites of interest are inaccessible to state-of-the-art planetary exploration robots because of the robots' inability to traverse steep slopes, unstructured terrain, and loose soil. Additionally, current single-robot approaches only allow a limited exploration speed and a single set of skills. Here, we present a team of legged robots with complementary skills for exploration missions in challenging planetary analog environments. We equipped the robots with an efficient locomotion controller, a mapping pipeline for online and post-mission visualization, instance segmentation to highlight scientific targets, and scientific instruments for remote and in-situ investigation. Furthermore, we integrated a robotic arm on one of the robots to enable high-precision measurements. Legged robots can swiftly navigate representative terrains, such as granular slopes beyond 25 degrees, loose soil, and unstructured terrain, highlighting their advantages compared to wheeled rover systems. We successfully verified the approach in analog deployments at the BeyondGravity ExoMars rover testbed, in a quarry in Switzerland, and at the Space Resources Challenge in Luxembourg. Our results show that a team of legged robots with advanced locomotion, perception, and measurement skills, as well as task-level autonomy, can conduct successful, effective missions in a short time. Our approach enables the scientific exploration of planetary target sites that are currently out of human and robotic reach.
Structural Complexity Of Quantum Networks
Creators: name: Siomau, Michael
Publisher: name: arXiv
Year: 2016
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Quantum network is a set of nodes connected with channels, through which the nodes communicate photons and classical information. Classical structural complexity of a quantum network may be defined through its physical structure, i.e. mutual position of nodes and channels connecting them. We show here that the classical structural complexity of a quantum network does not restrict the structural complexity of entanglement graphs, which may be created in the quantum network with local operations and classical communication. We show, in particular, that 1D quantum network can simulate both simple entanglement graphs such as lattices and random graphs and complex small-world graphs.
description: 5 pages, 1 figure
Ptychotis saxifraga Loret & Barrandon 1876
Creators: name: Jarvis, Charlie
Publisher: name: Zenodo
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Apiales
Apiaceae
Ptychotis
Ptychotis saxifraga

description: Aethusa bunius (Linnaeus) Linnaeus, Systema Vegetabilium, ed. 13: 236. 1774. RCN: 2052. Basionym: Carum bunias L. (1767). Lectotype (Reduron & Jarvis in Jarvis & al. in Taxon 55: 210. 2006): [icon] "Saxifraga Petroselini vel Coriandri folio" in Morison, Pl. Hist. Univ. 3: 274, s. 9, t. 2, f. 16. 1699. Current name:  Ptychotis saxifraga (L.) Loret & Barrandon (Apiaceae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part A), pp. 252-342 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 266, DOI: 10.5281/zenodo.291971
Molecular Pathways and Genomic Landscape of Glioblastoma Stem Cells: Opportunities for Targeted Therapy.
Creators: name: Hersh, Andrew M
name: Gaitsch, Hallie
name: Alomari, Safwan
name: Lubelski, Daniel
name: Tyler, Betty M
Publisher: name: Apollo - University of Cambridge Repository
Year: 2022
Subjects: glioblastoma
stem cell
targeted therapy
molecular pathway

description: Glioblastoma (GBM) is an aggressive tumor of the central nervous system categorized by the World Health Organization as a Grade 4 astrocytoma. Despite treatment with surgical resection, adjuvant chemotherapy, and radiation therapy, outcomes remain poor, with a median survival of only 14-16 months. Although tumor regression is often observed initially after treatment, long-term recurrence or progression invariably occurs. Tumor growth, invasion, and recurrence is mediated by a unique population of glioblastoma stem cells (GSCs). Their high mutation rate and dysregulated transcriptional landscape augment their resistance to conventional chemotherapy and radiation therapy, explaining the poor outcomes observed in patients. Consequently, GSCs have emerged as targets of interest in new treatment paradigms. Here, we review the unique properties of GSCs, including their interactions with the hypoxic microenvironment that drives their proliferation. We discuss vital signaling pathways in GSCs that mediate stemness, self-renewal, proliferation, and invasion, including the Notch, epidermal growth factor receptor, phosphatidylinositol 3-kinase/Akt, sonic hedgehog, transforming growth factor beta, Wnt, signal transducer and activator of transcription 3, and inhibitors of differentiation pathways. We also review epigenomic changes in GSCs that influence their transcriptional state, including DNA methylation, histone methylation and acetylation, and miRNA expression. The constituent molecular components of the signaling pathways and epigenomic regulators represent potential sites for targeted therapy, and representative examples of inhibitory molecules and pharmaceuticals are discussed. Continued investigation into the molecular pathways of GSCs and candidate therapeutics is needed to discover new effective treatments for GBM and improve survival.
Finsler fluid dynamics in $\mathrm{SO}(4)$ symmetric cosmology
Creators: name: Hohmann, Manuel
Publisher: name: arXiv
Year: 2015
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Theory (hep-th)
subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: We discuss the most general Finsler spacetime geometry obeying the cosmological symmetry group $\mathrm{SO}(4)$. On this background geometry we derive the equations of motion for the most general kinetic fluid obeying the same cosmological symmetry. For this purpose we propose a set of coordinates on the tangent bundle of the spacetime manifold which greatly simplifies the cosmological symmetry generators.
description: 6 pages, no figures; to appear in the conference proceedings of the 14th Marcel Grossmann Meeting, World Scientific Publishing Company
Description of Data on the Nimbus 7 LIMS Map Archive Tape: Ozone and Nitric Acid
Creators: name: Remsberg, Ellis E
name: Kurzeja, Robert J
name: Haggard, Kenneth V
name: Ruselll, James M
name: Gordley, Larry L
Publisher: name: Zenodo
Year: 1986
Subjects: subject: data and information
subject: https://id.loc.gov/authorities/subjects/sh2018002590.html
subject: https://id.loc.gov/authorities/subjects/sh85125953.html

description: Description of Data on the Nimbus 7 LIMS Map Archive Tape: Ozone and Nitric Acid
description: Previously curated at: http://cedadocs.ceda.ac.uk/979/ The publish date on this item was its original published date. Main files in this record: Description_of_Data_on_the_Nimbus_7_LIMS_Map_Archive_Tape_Ozone_and_Nitric_Acid.pdf Item originally deposited with Centre for Environmental Data Analysis (CEDA) document repository by Miss Poppy Townsend. Transferred to CEDA document repository community on Zenodo on 2022-11-24
Aethusa cynapium Linnaeus 1753
Creators: name: Jarvis, Charlie
Publisher: name: Zenodo
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Apiales
Apiaceae
Aethusa
Aethusa cynapium

description: Aethusa cynapium Linnaeus, Species Plantarum 1: 256. 1753. "Habitat inter Europae olera." RCN: 2051. Lectotype (Rechinger, Fl. Iranica 162: 345. 1987): Herb. Linn. No. 362.1 (LINN). Generitype of Aethusa Linnaeus. Current name:  Aethusa cynapium L. (Apiaceae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part A), pp. 252-342 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 266, DOI: 10.5281/zenodo.291971
A discrete Liouville identity for numerical reconstruction of Schrödinger potentials
Creators: name: Borcea, Liliana
name: Vasquez, Fernando Guevara
name: Mamonov, Alexander V.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Numerical Analysis (math.NA)
subject: FOS: Mathematics
subject: 35R30, 65N21, 05C22

description: We propose a discrete approach for solving an inverse problem for Schrödinger's equation in two dimensions, where the unknown potential is to be determined from boundary measurements of the Dirichlet to Neumann map. For absorptive potentials, and in the continuum, it is known that by using the Liouville identity we obtain an inverse conductivity problem. Its discrete analogue is to find a resistor network that matches the measurements, and is well understood. Here we show how to use a discrete Liouville identity to transform its solution to that of Schrödinger's problem. The discrete Schrödinger potential given by the discrete Liouville identity can be used to reconstruct the potential in the continuum in two ways. First, we can obtain a direct but coarse reconstruction by interpreting the values of the discrete Schrödinger potential as averages of the continuum Schrödinger potential on a special sensitivity grid. Second, the discrete Schrödinger potential may be used to reformulate the conventional nonlinear output least squares optimization formulation of the inverse Schrödinger problem. Instead of minimizing the boundary measurement misfit, we minimize the misfit between the discrete Schrödinger potentials. This results in a better behaved optimization problem that converges in a single Gauss-Newton iteration, and gives good quality reconstructions of the potential, as illustrated by the numerical results.
description: 20 pages, 8 figures
Defining the KRAS- and ERK-dependent transcriptome in KRAS-mutant cancers
Creators: name: Klomp, Jennifer E
name: Der, Channing J
name: Lee, Hey Min
name: Morales, Alexis J
name: Kopetz, Scott
name: Gautam, Prson
name: Drizyte-Miller, Kristina
name: Tran, Nhan L
name: Lim, Kian-Huat
name: Christensen, James G
name: Hibshman, Priya S
name: Taylor, Khalilah E
name: Wennerberg, Krister
name: Goodwin, Craig M
name: Hover, Laura D
name: Diehl, J Nathaniel
name: Edwards, A Cole
name: Barker, Natalie K
name: Wang-Gillam, Andrea
name: Bryant, Kirsten L
name: Olson, Peter
name: Prevatte, Alex W
name: Stalnecker, Clint A
name: Coker, Oluwadara
name: Peng, Sen
name: Shen, John P
name: Hallin, Jill
name: Klomp, Jeffrey A
name: Lee, Ye S
name: Cox, Adrienne D
name: Graves, Lee M
name: Herring, Laura E
name: Chowdhury, Saikat
Publisher: name: American Association for the Advancement of Science (AAAS)
Year: 2024

description: How the KRAS oncogene drives cancer growth remains poorly understood. Therefore, we established a systemwide portrait of KRAS- and extracellular signal-regulated kinase (ERK)-dependent gene transcription in KRAS-mutant cancer to delineate the molecular mechanisms of growth and of inhibitor resistance. Unexpectedly, our KRAS-dependent gene signature diverges substantially from the frequently cited Hallmark KRAS signaling gene signature, is driven predominantly through the ERK mitogen-activated protein kinase (MAPK) cascade, and accurately reflects KRAS- and ERK-regulated gene transcription in KRAS-mutant cancer patients. Integration with our ERK-regulated phospho- and total proteome highlights ERK deregulation of the anaphase promoting complex/cyclosome (APC/C) and other components of the cell cycle machinery as key processes that drive pancreatic ductal adenocarcinoma (PDAC) growth. Our findings elucidate mechanistically the critical role of ERK in driving KRAS-mutant tumor growth and in resistance to KRAS-ERK MAPK targeted therapies.
Superfast and sub-wavelength orbital rotation of plasmonic particles in focused Gaussian beams
Creators: name: Zhou, Lei-Ming
name: Zhu, Xiaoyu
name: Zheng, Yu
name: Wang, Long
name: Huang, Chan
name: Jiang, Xiaoyun
name: Shi, Yuzhi
name: Sun, Fang-Wen
name: Hu, Jigang
Publisher: name: arXiv
Year: 2023
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: The use of nanophotonics for optical manipulation has continuously attracted interest in both fundamental research and practical applications, due to its significantly enhanced capabilities at the nanoscale. In this work, we showed that plasmonic particles can be trapped at off-axis location in Gaussian beams assisted by surface plasmon resonance. The off-axis displacement can be tuned at the sub-wavelength scale by the incident light beams. Based on these, we propose that a superfast orbital rotation of particles in continuous-wave laser beam can be realized in tightly focused circularly polarized Gaussian beams. The rotation has a tunable orbital radius at the sub-wavelength scale and a superfast rotation speed (more than 10^4 r/s in water under common laboratory conditions). Our work will aid in the development of optically driven nanomachines, and find applications in micro/nano-rheology, micro-fluid mechanics, and biological research at the nanoscale.
description: 5 pages, 5 figures
A guide to the WMO code form FM 94 BUFR
Creators: name: Thorpe, W
Publisher: name: Zenodo
Year: 1995
Subjects: subject: data and information
subject: https://id.loc.gov/authorities/subjects/sh2018002590.html
subject: https://id.loc.gov/authorities/subjects/sh85084334.html

description: A guide to the WMO code form FM 94 BUFR
description: Previously curated at: http://cedadocs.ceda.ac.uk/980/ The publish date on this item was its original published date. Main files in this record: A_guide_to_the_WMO_code_form.pdf Item originally deposited with Centre for Environmental Data Analysis (CEDA) document repository by Miss Poppy Townsend. Transferred to CEDA document repository community on Zenodo on 2022-11-24
Trichopria myrmicae Huggert & Masner 1983
Creators: name: Notton, David G.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Mymaridae
Trichopria
Trichopria myrmicae

description: Trichopria myrmicae Huggert & Masner, 1983: 68, 77, figs 39-49.
Valid name
Trichopria myrmicae Huggert & Masner, 1983.
Summary of types
Paratype ♀.
description: Published as part of Notton, David G., 2014, A catalogue of the types of Diapriinae (Hymenoptera, Diapriidae) at the Natural History Museum, London, pp. 1-123 in European Journal of Taxonomy 75 on page 47, DOI: 10.5852/ejt.2014.75, http://zenodo.org/record/3862773
Walking on exoplanets: Is Star Wars right?
Creators: name: Ballesteros, Fernando J.
name: Luque, Bartolo
Publisher: name: arXiv
Year: 2016
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: As the number of detected extrasolar planets increases, exoplanet databases become a valuable resource, confirming some details about planetary formation, but also challenging our theories with new unexpected properties.
description: 7 pages and 1 figure
The first comprehensive Milky Way stellar mock catalogue for the Chinese Space Station Telescope Survey Camera
Creators: name: Chen, Yang
name: Fu, Xiaoting
name: Liu, Chao
name: Tio, Piero Dal
name: Girardi, Léo
name: Pastorelli, Giada
name: Mazzi, Alessandro
name: Trabucchi, Michele
name: Tian, Hao
name: Fan, Dongwei
name: Marigo, Paola
name: Bressan, Alessandro
Publisher: name: arXiv
Year: 2023
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: The Chinese Space Station Telescope (CSST) is a cutting-edge two-meter astronomical space telescope currently under construction. Its primary Survey Camera (SC) is designed to conduct large-area imaging sky surveys using a sophisticated seven-band photometric system. The resulting data will provide unprecedented data for studying the structure and stellar populations of the Milky Way. To support the CSST development and scientific projects related to its survey data, we generate the first comprehensive Milky Way stellar mock catalogue for the CSST SC photometric system using the TRILEGAL stellar population synthesis tool. The catalogue includes approximately 12.6 billion stars, covering a wide range of stellar parameters, photometry, astrometry, and kinematics, with magnitude reaching down to $g\,=\,27.5$ mag in the AB magnitude system. The catalogue represents our benchmark understanding of the stellar populations in the Milky Way, enabling a direct comparison with the future CSST survey data. Particularly, it sheds light on faint stars that are hidden from current sky surveys. Our crowding limit analysis based on this catalogue provides compelling evidence for the extension of the CSST Optical Survey (OS) to cover low Galactic latitude regions. The strategic extension of the CSST-OS coverage, combined with this comprehensive mock catalogue, will enable transformative science with the CSST.
description: Accepted by Sci. China Phys. Mech. Astron, catalogue at https://nadc.china-vo.org/data/data/csst-trilegal/f, 16 pages, 9 figures
Loneliness and low life satisfaction associated with older adults’ poor oral health
Creators: name: Weintraub, J. A.
name: Preisser, J. S.
name: Moss, K. L.
name: Jones, J. A.
name: Finlayson, T. L.
Publisher: name: Frontiers
Year: 2024

description: To examine the association of older adults’ loneliness, life satisfaction, and other psychological stressors and resources with oral health status. This study merged 2018 data from the Health and Retirement Study (HRS) CORE survey with the HRS-Dental Module, and Psychosocial and Lifestyle Questionnaire–Panel A “Leave Behind” surveys (HRS-LB)(N = 418). Dental Module outcomes of interest were self-rated oral health status (SROH), and oral health-related quality of life (OHQOL). Older adults reported on loneliness, life satisfaction, perceived age, social status, control, mastery, and chronic stressors. Three distinct profiles based on the distribution of loneliness and life satisfaction were previously identified in the combined HRS and HRS-LB study population (N = 4,703) using latent class analysis (LCA). Class A:“Not Lonely/Satisfied” adults had the fewest psychosocial risk factors and most resources; Class C:“Lonely/Unsatisfied” adults exhibited the opposite profile (most risk factors, fewest resources); Class B:“Lonely/Satisfied” adults exhibited loneliness with favorable life satisfaction. Regression models examined associations between LCA classes and fair/poor SROH and the OHQOL scale score and individual items, after adjusting for socio-demographics. About 13% of older adults experienced loneliness, and about 16% reported low life satisfaction. About one-quarter (28%) of older adults reported fair/poor SROH, and they experienced more psychosocial risk factors than their counterparts with better oral health status. Nearly half the older adults were categorized in Class A:“Not Lonely/Satisfied” (n = 201), and about one-quarter each in Class B:“Lonely/Satisfied” (n = 103) and Class C:“Lonely/Unsatisfied” (n = 112). In fully adjusted models, Class B older adults had 1.81 (1.11–2.96) times greater odds of fair/poor SROH, and Class C had 4.64 (2.78–7.73) times greater odds of fair/poor SROH than Class A. Fully adjusted linear regression model results indicated a gradient by LCA class. OHQOL varied; Class A older adults had the best (lowest) OHQOL score (mean = 8.22, 4.37–12.10), Class B scored in the middle (mean = 12.00, 7.61–16.50), while Class C had the worst (highest) OHQOL score (mean = 16.20, 11.80–20.60). Loneliness, as a defining characteristic distinguishing three latent classes of older adults, was associated with more risk factors and poorer oral health outcomes. Loneliness, life satisfaction, perceived age, social status, control, mastery, and chronic stressors vary widely for older adults and matter for oral health and OHQOL.
Constraining the Nordtvedt parameter with the BepiColombo Radioscience experiment
Creators: name: De Marchi, Fabrizio
name: Tommei, Giacomo
name: Milani, Andrea
name: Schettino, Giulia
Publisher: name: arXiv
Year: 2016
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: BepiColombo is a joint ESA/JAXA mission to Mercury with challenging objectives regarding geophysics, geodesy and fundamental physics. The Mercury Orbiter Radioscience Experiment (MORE) is one of the on-board experiments, including three different but linked experiments: gravimetry, rotation and relativity. The aim of the relativity experiment is the measurement of the post-Newtonian parameters. Thanks to accurate tracking between Earth and spacecraft, the results are expected to be very precise. However, the outcomes of the experiment strictly depends on our "knowledge" about solar system: ephemerides, number of bodies (planets, satellites and asteroids) and their masses. In this paper we describe a semi-analytic model used to perform a covariance analysis to quantify the effects, on the relativity experiment, due to the uncertainties of solar system bodies parameters. In particular, our attention is focused on the Nordtvedt parameter $η$ used to parametrize the strong equivalence principle violation. After our analysis we estimated $σ[η]\lessapprox 4.5\times 10^{-5}$ which is about 1~order of magnitude larger than the "ideal" case where masses of planets and asteroids have no errors. The current value, obtained from ground based experiments and lunar laser ranging measurements, is $σ[η]\approx 4.4\times 10^{-4}$. Therefore, we conclude that, even in presence of uncertainties on solar system parameters, the measurement of $η$ by MORE can improve the current precision of about 1~order of magnitude.
Schizophyllum commune Fr.
Creators: name: Jarvis, Charlie
Publisher: name: Zenodo
Year: 2007
Subjects: Biodiversity
Taxonomy
Fungi
Basidiomycota
Agaricomycetes
Agaricales
Schizophyllaceae
Schizophyllum
Schizophyllum commune

description: Agaricus alneus Linnaeus, Species Plantarum 2: 176. 1753. "Habitat in Alno." RCN: 8463. Type not designated. Original material: none traced. Current name:  Schizophyllum commune Fr.: Fr. (Schizophyllaceae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part A), pp. 252-342 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 267, DOI: 10.5281/zenodo.291971
Vortices catapult droplets in atomization
Creators: name: Jerome, J John Soundar
name: Marty, Sylvain
name: Matas, Jean-Philippe
name: Zaleski, Stéphane
name: Hoepffner, Jérôme
Publisher: name: arXiv
Year: 2016
Subjects: subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences

description: A droplet ejection mechanism in planar two-phase mixing layers is examined. Any disturbance on the gas-liquid interface grows into a Kelvin-Helmholtz wave, and the wave crest forms a thin liquid film that flaps as the wave grows downstream. Increasing the gas speed, it is observed that the film breaks up into droplets which are eventually thrown into the gas stream at large angles. In a flow where most of the momentum is in the horizontal direction, it is surprising to observe these large ejection angles. Our experiments and simulations show that a recirculation region grows downstream of the wave and leads to vortex shedding similar to the wake of a backward-facing step. The ejection mechanism results from the interaction between the liquid film and the vortex shedding sequence: a recirculation zone appears in the wake of the wave and a liquid film emerges from the wave crest; the recirculation region detaches into a vortex and the gas flow over the wave momentarily reattaches due to the departure of the vortex; this reattached flow pushes the liquid film down; by now, a new recirculation vortex is being created in the wake of the wave - just where the liquid film is now located; the liquid film is blown up from below by the newly formed recirculation vortex in a manner similar to a bag-breakup event; the resulting droplets are catapulted by the recirculation vortex.
description: accepted for publication (2013)
Corrections of Electron-Phonon coupling for Second-Order Structural Phase Transitions
Creators: name: Graml, Mario
name: Hingerl, Kurt
Publisher: name: arXiv
Year: 2024
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: Structural phase transitions are accompanied by a movement of one nucleus (or a few) in the crystallographic unit cell. If the nucleus movement is continuous, a second order phase transition without latent heat results, whereas an abrupt nucleus displacement indicates a first order phase transition with accompanying latent heat. In this paper an Hamiltonian including electron-phonon coupling (EPC) as proposed by Kristoffel and Konsel\cite{Kristoffel1973} is taken. Contrary to their treatment, both the kinetic energy of the nucleus and its position are treated. The interaction of the many electron system with the single nucleus is taken into account by the Born-Oppenheimer approximation and perturbative expressions for the free energies are derived. The nuclei corrections due to the entangled electrons are found to be minor, but highlight the importance of the symmetry breaking at low temperature. Furthermore the free energy for a canonical ensemble is computed, whereas Kristoffel and Konsel used a grand canonical ensemble, which allows to derive more stringent bounds on the free energy. For the zero-order nucleus correction the shift of the phase transition temperature by evaluating the free energy is deduced.
description: 12 pages, two figures
Additional file 1 of DNA methylation changes in response to neoadjuvant chemotherapy are associated with breast cancer survival
Creators: name: Pedersen, Christine Aaserød
name: Cao, Maria Dung
name: Fleischer, Thomas
name: Rye, Morten B.
name: Knappskog, Stian
name: Eikesdal, Hans Petter
name: Lønning, Per Eystein
name: Tost, Jörg
name: Kristensen, Vessela N.
name: Tessem, May-Britt
name: Giskeødegård, Guro F.
name: Bathen, Tone F.
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Plant Biology

description: Additional file 1. A document displaying supplementary figures.
INTERMAP Product Handbook and Quick Start Guide
Creators: name: INTERMAP
Publisher: name: Zenodo
Year: 2004
Subjects: subject: https://id.loc.gov/authorities/subjects/sh85125953.html
subject: https://id.loc.gov/authorities/subjects/sh85040468.html

description: Intermap's core products are created from X-band IFSAR1 data and are used in a wide range of applications. This chapter explains what they are and gives a quick overview of how they are frequently used. Check 5.0 Core Product Specifications and 6.0 Introduction to Applications for details.
description: Previously curated at: http://cedadocs.ceda.ac.uk/982/ The publish date on this item was its original published date. Main files in this record: INTERMAP_Product_Handbook_and_Quick_Start_Guide_Version_3.3.pdf Item originally deposited with Centre for Environmental Data Analysis (CEDA) document repository by Miss Poppy Townsend. Transferred to CEDA document repository community on Zenodo on 2022-11-24
Marasmius androsaceus
Creators: name: Jarvis, Charlie
Publisher: name: Zenodo
Year: 2007
Subjects: Biodiversity
Taxonomy
Fungi
Basidiomycota
Agaricomycetes
Agaricales
Marasmiaceae
Marasmius
Marasmius androsaceus

description: Agaricus androsaceus Linnaeus, Species Plantarum 2: 1175. 1753. "Habitat in foliis dejectis Pini." RCN: 8412. Type not designated. Original material: [icon] in Vaillant, Bot. Paris.: 69, t. 11, f. 21, 22, 23. 1727; [icon] in Boccone, Mus. Piante Rar. Sicilia: 143, t. 104. 1697. Current name:  Marasmius androsaceus (L.: Fr.) Fr. (Marasmiaceae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part A), pp. 252-342 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 267, DOI: 10.5281/zenodo.291971
Depth-Based Object Tracking Using a Robust Gaussian Filter
Creators: name: Issac, Jan
name: Wüthrich, Manuel
name: Cifuentes, Cristina Garcia
name: Bohg, Jeannette
name: Trimpe, Sebastian
name: Schaal, Stefan
Publisher: name: arXiv
Year: 2016
Subjects: subject: Robotics (cs.RO)
subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: We consider the problem of model-based 3D-tracking of objects given dense depth images as input. Two difficulties preclude the application of a standard Gaussian filter to this problem. First of all, depth sensors are characterized by fat-tailed measurement noise. To address this issue, we show how a recently published robustification method for Gaussian filters can be applied to the problem at hand. Thereby, we avoid using heuristic outlier detection methods that simply reject measurements if they do not match the model. Secondly, the computational cost of the standard Gaussian filter is prohibitive due to the high-dimensional measurement, i.e. the depth image. To address this problem, we propose an approximation to reduce the computational complexity of the filter. In quantitative experiments on real data we show how our method clearly outperforms the standard Gaussian filter. Furthermore, we compare its performance to a particle-filter-based tracking method, and observe comparable computational efficiency and improved accuracy and smoothness of the estimates.
Next-Generation Contraceptive Intravaginal Ring: Comparison of Etonogestrel and Ethinyl Estradiol In Vitro and In Vivo Release from 3D-Printed Intravaginal Ring and NuvaRing
Creators: name: Thorson, Allison L.
name: Young, Isabella C.
name: Benhabbour, Soumya Rahima
name: Vincent, Kathleen L.
name: Janusziewicz, Rima
name: Sellers, Rani S.
name: Sykes, Craig
name: Schauer, Amanda P.
name: Cottrell, Mackenzie L.
Publisher: name: MDPI
Year: 2024

description: Intravaginal rings (IVRs) represent a well-established, woman-controlled and sustained vaginal drug delivery system suitable for a wide range of applications. Here, we sought to investigate the differences in etonogestrel (ENG) and ethinyl estradiol (EE) release from a 3D-printed IVR utilizing continuous liquid interface production (CLIP™) (referred to as CLIPLOW for low drug loading and CLIPHIGH IVRs for high drug loading) and NuvaRing, a commercially available injection molded IVR. We conducted in vitro release studies in simulated vaginal fluid to compare the release of ENG and EE from CLIPLOW IVRs and NuvaRing. CLIPLOW IVRs had a similar hormone dose to NuvaRing and exhibited slightly slower ENG release and greater EE release in vitro compared to NuvaRing. When administered to female sheep, NuvaRing demonstrated greater ENG/EE levels in plasma, vaginal tissue and vaginal fluids compared to CLIPLOW IVR despite similar drug loadings. Leveraging observed hormones levels in sheep from NuvaRing as an effective contraceptive benchmark, we developed a long-acting CLIPHIGH IVR with increased ENG and EE doses that demonstrated systemic and local hormone levels greater than the NuvaRing for 90 days in sheep. No signs of toxicity were noted regarding general health, colposcopy, or histological analysis in sheep after CLIPHIGH IVR administration. Our results provided (1) a comparison of ENG and EE release between a 3D-printed IVR and NuvaRing in vitro and in vivo, (2) a preclinical pharmacokinetic benchmark for vaginally delivered ENG and EE and (3) the generation of a 90-day CLIP IVR that will be utilized in future work to support the development of a long-acting ENG/EE IVR combined with an antiretroviral for the prevention of HIV and unplanned pregnancy.
From 2D to 3D: AISG-SLA Visual Localization Challenge
Creators: name: Gao, Jialin
name: Ong, Bill
name: Lwi, Darld
name: Ng, Zhen Hao
name: Yee, Xun Wei
name: Mak, Mun-Thye
name: Ng, Wee Siong
name: Ng, See-Kiong
name: Teo, Hui Ying
name: Khoo, Victor
name: Bökman, Georg
name: Edstedt, Johan
name: Brodt, Kirill
name: Boittiaux, Clémentin
name: Ferrera, Maxime
name: Konev, Stepan
Publisher: name: arXiv
Year: 2024
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: Research in 3D mapping is crucial for smart city applications, yet the cost of acquiring 3D data often hinders progress. Visual localization, particularly monocular camera position estimation, offers a solution by determining the camera's pose solely through visual cues. However, this task is challenging due to limited data from a single camera. To tackle these challenges, we organized the AISG-SLA Visual Localization Challenge (VLC) at IJCAI 2023 to explore how AI can accurately extract camera pose data from 2D images in 3D space. The challenge attracted over 300 participants worldwide, forming 50+ teams. Winning teams achieved high accuracy in pose estimation using images from a car-mounted camera with low frame rates. The VLC dataset is available for research purposes upon request via vlc-dataset@aisingapore.org.
Wind power and the UK wind resource
Creators: name: Sinden, Graham
Publisher: name: Zenodo
Year: 2005
Subjects: subject: ecology and environment
subject: https://id.loc.gov/authorities/subjects/sh2018002590.html
subject: https://id.loc.gov/authorities/subjects/sh85084334.html

description: The importance of wind power to the UK's renewable electricity supply is predicted to increase in the coming years. Together with this greater reliance on wind power there is a greater need for understanding the characteristics of the UK's wind resource. This report presents information on the characteristics of the UK wind resource, and some of the impacts that wind power will have on the UK electricity network.
description: Previously curated at: http://cedadocs.ceda.ac.uk/983/ The publish date on this item was its original published date. Main files in this record: Wind_power_and_the_UK_wind_resource.pdf Item originally deposited with Centre for Environmental Data Analysis (CEDA) document repository by Miss Poppy Townsend. Transferred to CEDA document repository community on Zenodo on 2022-11-24
Reliable estimation of tree branch lengths using deep neural networks
Creators: name: Schrider, Daniel R.
name: Suvorov, Anton
Publisher: name: Public Library of Science (PLoS)
Year: 2024

description: A phylogenetic tree represents hypothesized evolutionary history for a set of taxa. Besides the branching patterns (i.e., tree topology), phylogenies contain information about the evolutionary distances (i.e. branch lengths) between all taxa in the tree, which include extant taxa (external nodes) and their last common ancestors (internal nodes). During phylogenetic tree inference, the branch lengths are typically co-estimated along with other phylogenetic parameters during tree topology space exploration. There are well-known regions of the branch length parameter space where accurate estimation of phylogenetic trees is especially difficult. Several novel studies have recently demonstrated that machine learning approaches have the potential to help solve phylogenetic problems with greater accuracy and computational efficiency. In this study, as a proof of concept, we sought to explore the possibility of machine learning models to predict branch lengths. To that end, we designed several deep learning frameworks to estimate branch lengths on fixed tree topologies from multiple sequence alignments or its representations. Our results show that deep learning methods can exhibit superior performance in some difficult regions of branch length parameter space. For example, in contrast to maximum likelihood inference, which is typically used for estimating branch lengths, deep learning methods are more efficient and accurate. In general, we find that our neural networks achieve similar accuracy to a Bayesian approach and are the best-performing methods when inferring long branches that are associated with distantly related taxa. Together, our findings represent a next step toward accurate, fast, and reliable phylogenetic inference with machine learning approaches.
Generating potassium abundance variations in the Solar Nebula
Creators: name: Hubbard, Alexander
Publisher: name: arXiv
Year: 2016
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: An intriguing aspect of chondritic meteorites is that they are complementary: while their separate components have wildly varying abundances, bulk chondrites have nearly solar composition. This implies that the nearly-solar reservoirs in which chondrites were born were in turn assembled from sub-reservoirs of differing compositions that birthed the different components. We focus on explaining the potassium abundance variations between chondrules even within a single chondrite, while maintaining the observed CI $^{41}$K to $^{39}$K ratios. This requires physically separating potassium and chondrules while the temperature is high enough for K to be in the gas phase. We examine several mechanisms which could drive the dust through gas and show that to do so locally would have required long (sub-orbital to many orbits) time scales; with shortest potassium depletion time scales occurring in a scenario where chondrules formed high above the midplane and settled out of the evaporated potassium. While orbital time scales are at odds with laboratory chondrule cooling rate estimates, any other model for the origin for the potassium abundance variation has to wrestle with the severe logistical difficulty of generating a plethora of correlated reservoirs which varied strongly in their potassium abundances, but not in their potassium isotope ratios.
description: 11 pages; 4 figures; Accepted for publication, MNRAS
Derivative-based global sensitivity measures and their link with Sobol sensitivity indices
Creators: name: Kucherenko, S.
name: Song, S.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Statistics Theory (math.ST)
subject: Numerical Analysis (math.NA)
subject: Probability (math.PR)
subject: FOS: Mathematics

description: The variance-based method of Sobol sensitivity indices is very popular among practitioners due to its efficiency and easiness of interpretation. However, for high-dimensional models the direct application of this method can be very time consuming and prohibitively expensive to use. One of the alternative global sensitivity analysis methods known as the method of derivative based global sensitivity measures (DGSM) has recently become popular among practitioners. It has a link with the Morris screening method and Sobol sensitivity indices. DGSM are very easy to implement and evaluate numerically. The computational time required for numerical evaluation of DGSM is generally much lower than that for estimation of Sobol sensitivity indices. We present a survey of recent advances in DGSM and new results concerning new lower and upper bounds on the values of Sobol total sensitivity indices. Using these bounds it is possible in most cases to get a good practical estimation of the values of Sobol total sensitivity indices. Several examples are used to illustrate an application of DGSM.
description: Monte Carlo and Quasi-Monte Carlo Methods 2014, conference, Monte Carlo and Quasi-Monte Carlo Methods, R. Cools and D. Nuyens (eds.), Springer Proceedings in Mathematics & Statistics 163, Springer International Publishing Switzerland 2016
Environmental effects of ozone depletion: 1998 Assessment
Creators: name: van der Leun, J C
name: Tang, X
name: Tevini, M
Publisher: name: Zenodo
Year: 1998
Subjects: subject: biology and microbiology
subject: ecology and environment
subject: https://id.loc.gov/authorities/subjects/sh85081263.html
subject: https://id.loc.gov/authorities/subjects/sh85022986.html
subject: https://id.loc.gov/authorities/subjects/sh2018002590.html
subject: https://id.loc.gov/authorities/subjects/sh85084334.html

description: The Montreal Protocol on Substances that Deplete the Ozone Layer requires periodic assessments of available scientific, environmental, technical and economic information. The assessments shall be made at least every four years. Assessments were made in 1989, 1991, 1994, and the present one, in 1998. The 1998 assessment focuses on new information since 1994, but it includes some background of prior information, so that it can be read without having the earlier reports at hand. In 1994, the ozone layer was predicted to become thinner until about 1998, and to recover gradually thereafter. Taking into account new information, the Atmospheric Science Panel now expects that the most vulnerable period for ozone depletion will be extended into the coming two decades. Scientific studies are continuing on the most important effects, and on what can be done to prevent or mitigate these. The present assessment deals with the results of such investigations. These repeatedly give reasons for concern for potential effects, but relatively little progress has been made in quantifying these effects. The more the investigators look into the problems, the more the complexity becomes apparent. Nevertheless, the knowledge is accumulating. In comparison with the earlier assessments on effects of ozone depletion, the present report has a new section, Frequently Asked Questions.
description: Previously curated at: http://cedadocs.ceda.ac.uk/984/ The publish date on this item was its original published date. Main files in this record: Environmental-Effects-Assess98.pdf Item originally deposited with Centre for Environmental Data Analysis (CEDA) document repository by Miss Poppy Townsend. Transferred to CEDA document repository community on Zenodo on 2022-11-24
Lenzites betulina
Creators: name: Jarvis, Charlie
Publisher: name: Zenodo
Year: 2007
Subjects: Biodiversity
Taxonomy
Fungi
Basidiomycota
Agaricomycetes
Polyporales
Coriolaceae
Lenzites
Lenzites betulina

description: Agaricus betulinus Linnaeus, Species Plantarum 2: 1176. 1753. "Habitat in Betulis." RCN: 8465. Type not designated. Original material: none traced. Current name:  Lenzites betulina (L.: Fr.) Fr. (Polyporaceae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part A), pp. 252-342 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 267, DOI: 10.5281/zenodo.291971
ENVISAT-1 Mission & System Summary
Creators: name: ESA
Publisher: name: Zenodo
Year: 1998
Subjects: subject: https://id.loc.gov/authorities/subjects/sh85125953.html
subject: https://id.loc.gov/authorities/subjects/sh85042383.html
subject: https://id.loc.gov/authorities/subjects/sh85084334.html

description: This document provides a brief description of the ENVISAT-1 mission objectives and the underlying system design concept including all its major constituents and its relation to the operation strategy. It also describes the status of the design and development of the system elements.
description: Previously curated at: http://cedadocs.ceda.ac.uk/986/ The publish date on this item was its original published date. Main files in this record: ENVISAT-1_mission_and_system_summary.pdf Item originally deposited with Centre for Environmental Data Analysis (CEDA) document repository by Miss Poppy Townsend. Transferred to CEDA document repository community on Zenodo on 2022-11-24
Neurogalesus carinatus Kieffer 1907
Creators: name: Notton, David G.
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Diapriidae
Neurogalesus
Neurogalesus carinatus

description: Neurogalesus carinatus Kieffer, 1907: 298.
Valid name
Neurogalesus carinatus Kieffer, 1907.
Summary of types
Holotype ♀, BMNH number 9.673, by monotypy.
Primary type data
Type; Mackay/ 3.01; Queensland./ R.E.Turner./ 1907-94; Neurogalesus / carinatus ♀ / type. Kieff./ named by/ J.J.Kieffer.
Type locality
Australia, Queensland, Mackay.
Remarks
This species was described from an unspecified number of females; however, Kieffer describes the scutellum as “vorn beschädigt”, i.e., damaged in front, a rather unusual thing to say. The specimen recognised as the type has been pinned at exactly this point, destroying the basal scutellar pit. Had Kieffer seen any other specimens it is likely they would not have been damaged in precisely this place and he would have described the distinctive bifoveate scutellar pit, so it is considered that he saw only this specimen; hence it is a holotype by monotypy. The holotype is micropinned through the mesosoma and has the head missing. Despite what Kieffer says about its resemblance to a Galesus, this species belongs to the Spilomicrini.
description: Published as part of Notton, David G., 2014, A catalogue of the types of Diapriinae (Hymenoptera, Diapriidae) at the Natural History Museum, London, pp. 1-123 in European Journal of Taxonomy 75 on page 48, DOI: 10.5852/ejt.2014.75, http://zenodo.org/record/3862773
Epitaxial growth and Photoluminescence Excitation spectroscopy of CdSe Quantum Dots in (Zn,Cd)Se barrier
Creators: name: Piwowar, J.
name: Pacuski, W.
name: Smoleński, T.
name: Goryca, M.
name: Bogucki, A.
name: Golnik, A.
name: Nawrocki, M.
name: Kossacki, P.
name: Suffczyński, J.
Publisher: name: arXiv
Year: 2015
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Design, epitaxial growth, and resonant spectroscopy of CdSe Quantum Dots (QDs) embedded in an innovative (Zn,Cd)Se barrier are presented. The (Zn,Cd)Se barrier enables shifting of QDs energy emission down to 1.87 eV, that is below the energy of Mn$^{2+}$ ions internal transition (2.1 eV). This opens a perspective for implementation of epitaxial CdSe QDs doped with several Mn ions as, e. g., the light sources in high quantum yield magnetooptical devices. Polarization resolved Photoluminescence Excitation measurements of individual QDs reveal sharp ($Γ
description: 6 pages, 5 figures
Additional file 1 of Co-deposition of SOD1, TDP-43 and p62 proteinopathies in ALS: evidence for multifaceted pathways underlying neurodegeneration
Creators: name: Trist, Benjamin G.
name: Fifita, Jennifer A.
name: Hogan, Alison
name: Grima, Natalie
name: Smith, Bradley
name: Troakes, Claire
name: Vance, Caroline
name: Shaw, Christopher
name: Al-Sarraj, Safa
name: Blair, Ian P.
name: Double, Kay L.
Publisher: name: figshare
Year: 2022
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Computational Biology

description: Additional file 1: Table S1. Demographic and clinical information for human post-mortem tissue cases. Table S2. Demographic statistics for diagnostic groups. Table S3. Primary antibody details and applications. Table S4. Number of spinal cord motor neurons examined across all cases of each diagnostic group for quantification of each pathology of interest. Fig. S1. No primary controls and spectral validation of fluorescent microscopy workflow.