cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
DNA barcoding elucidates the population genetic diversity of venomous cobra species (Reptilia: Elapidae) in Indo-Bangladesh region
Creators: name: Shantanu Kundu
name: Hmar Tlawmte Lalremsanga
name: Md. Mizanur Rahman
name: Md. Farid Ahsan
name: Biakzuala, Lal
name: Kumar, Vikas
name: Chandra, Kailash
name: A. M. A. M. Zonaed Siddiki
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Inorganic Chemistry
subject: Plant Biology

description: The DNA barcode data of venomous cobra species (Naja naja and Naja kaouthia) are limited in the global database, especially from India and Bangladesh. Owing to the rapid success of DNA barcoding for discriminating a variety of species around the world, the present study aimed to generate the mitochondrial cytochrome c oxidase subunit I (COI) gene information of two morphologically identified deadly elapid species from the Mizoram state in northeast India and Rangpur in northern Bangladesh. The multiple species delimitation methods: Automatic Barcode Gap Discovery (ABGD), General Mixed Yule-Coalescent (GMYC), and Poisson-Tree-Processes (bPTP) revealed 14, 16, and 18 molecular operational taxonomic units (MOTUs) for 12 Naja species. The binocellate cobra, N. naja showed monophyletic clustering in both maximum-likelihood (ML) and Bayesian (BA) trees, single MOTU in ABGD and GMYC, and negligible intra-species genetic distance (0.2%) with two haplotypes. However, the monocellate cobra, N. kaouthia showed paraphyletic and polytomy in ML and BA phylogenies respectively; more than one MOTUs in ABGD, GMYC, and bPTP analyses; and sufficient intra-species genetic distances (0.6–2.3%) with five haplotypes related to the diverse geographical locations in Bangladesh, China, India, and Thailand. By superimposing the executed species delimitation criteria, the present molecular-based investigation concludes the presence of cryptic diversity of N. kaouthia in Indo-Bangladesh, China, and Thailand.
Design of luminescent dinuclear platinum(II) complexes and iridium(III) catalytic hydrogen gas generation
Creators: name: Cinninger, Leander Michael
Publisher: name: The University of Texas at Austin
Year: 2017
Subjects: Dinuclear platinum(II) complexes
Ammonia-borane dehydrogenation
Single crystal x-ray diffraction

description: The use of hydrogen gas as an alternative to a petroleum fuel source has become a primary focus in research in the last decade to decrease global greenhouse gas emissions. However, further improvements in the safe storage of hydrogen gas must be developed before it can become a viable alternative fuel source. One possibility is the use of the non-flammable solid, ammonia-borane, as a form of molecular hydrogen storage. Ammonia-borane can be readily dehydrogenated using transition metal catalysts to generate hydrogen gas. One such dehydrogenation catalyst is the iridium pincer complex, (1,3-OPt-Bu₂)₂C₆H₃)Ir(H)₂, which has been shown to readily react with substituted ammonia-borane to generate hydrogen gas by Heinekey and coworkers. Our focus is to functionalize the iridium catalyst, (1,3-OPt-Bu₂)₂C₆H₃)Ir(H)₂, with capped 3,4-ethylenedioxythiophene groups to determine if functionalization of the ligand with electropolymerizable groups will alter the catalytic activity. The transportation sector along with the production of electricity for lighting applications is estimated to generate 18% of the global greenhouse gas emissions. Thus, efficiency gains in the lighting sector along with alternative fuel sources for transportation would significantly cut the global greenhouse gas emissions. One potential way to more effectively use electricity for lighting applications is the development of more efficient solid-state lighting. One promising new form of solid-state lighting that is currently being developed are light-emitting electrochemical cells (LEECs). Herein is reported the synthesis, characterization, and study of the photophysical properties of a series of novel pyrazolate bridged dinuclear Pt(II) complexes. The incorporation of the 3,5-diphenylpyrazole bridged dinuclear Pt(II) complex into a light-emitting electrochemical cell is also discussed. In developing novel ligands and metal complexes, understanding the solid-state properties of these materials is of fundamental importance. One way in which this may be accomplished is through the use of x-ray crystallography. Single crystals of several novel organic ligands and metal complexes have been grown and their single crystal structures have been determined and fully analyzed for key crystallographic features.
Isotomiella unguiculata Deharveng 1989
Creators: name: Thibaud, Jean-Marc
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Collembola
Entomobryomorpha
Isotomidae
Isotomiella
Isotomiella unguiculata

description: Isotomiella unguiculata Deharveng, 1989 **
Isotomiella unguiculata Deharveng, 1989: 200.
DISTRIBUTION. — Doubs. Source de Pont-les-Moulinset vallée du Cusançin, source des Narines du Diable (Deharveng 1989).
description: Published as part of Thibaud, Jean-Marc, 2017, Catalogue des collemboles de France, pp. 297-436 in Zoosystema 39 (3) on page 359, DOI: 10.5252/z2017n3a1, http://zenodo.org/record/5496272
Study of Three-Nucleon Dynamics in the dp breakup collisions using the WASA detector
Creators: name: Adlarson, P.
name: Augustyniak, W.
name: Bardan, W.
name: Bashkanov, M.
name: Bergmann, F. S.
name: Berlowski, M.
name: Bondar, A.
name: Buscher, M.
name: Calen, H.
name: Ciepal, I.
name: Clement, H.
name: Czerwinski, E.
name: Demmich, K.
name: Engels, R.
name: Erven, A.
name: Erven, W.
name: Eyrich, W.
name: Fedorets, P.
name: Fohl, K.
name: Fransson, K.
name: Goldenbaum, F.
name: Goswami, A.
name: Grigoryev, K.
name: Heijkenskjold, L.
name: Hejny, V.
name: Husken, N.
name: Jarczyk, L.
name: Johansson, T.
name: Kamys, B.
name: Kemmerling, G.
name: Khoukaz, A.
name: Khreptak, A.
name: Kirillov, D. A.
name: Kistryn, S.
name: Kleines, H.
name: Klos, B.
name: Krzemien, W.
name: Kulessa, P.
name: Kupsc, A.
name: Lalwani, K.
name: Lersch, D.
name: Lorentz, B.
name: Magiera, A.
name: Maier, R.
name: Marciniewski, P.
name: Marianski, B.
name: Morsch, H. -P.
name: Moskal, P.
name: Parol, W.
name: del Rio, E. Perez
name: Piskunov, N. M.
name: Prasuhn, D.
name: Pszczel, D.
name: Pysz, K.
name: Ritman, J.
name: Roy, A.
name: Rundel, O.
name: Sawant, S.
name: Schadmand, S.
name: Sefzick, T.
name: Serdyuk, V.
name: Shwartz, B.
name: Skorodko, T.
name: Skurzok, M.
name: Smyrski, J.
name: Sopov, V.
name: Stassen, R.
name: Stepaniak, J.
name: Stephan, E.
name: Sterzenbach, G.
name: Stockhorst, H.
name: Stroher, H.
name: Szczurek, A.
name: Trzcinski, A.
name: Wolke, M.
name: Wronska, A.
name: Wustner, P.
name: Yamamoto, A.
name: Zabierowski, J.
name: Zieli, M. J.
name: Zlomanczuk, J.
name: Zupranski, P.
name: Zurek, M.
name: Deltuva, A.
name: Golak, J.
name: Kozela, A.
name: Skibinski, R.
name: Skwira-Chalot, I.
name: Witala, H.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: Differential cross section for the 1H(d,pp)n breakup reaction at deuteron beam energy of 340 MeV has been measured with the use of WASA detector at COSY-Juelich. The set of proton-proton coincidences registered at Forward Detector has been analysed on dense grid of kinematic variables, giving in total around 5600 data points. The cross section data are compared to theoretical predictions based on the state-of-the-art nucleon-nucleon potentials, combined with three-nucleon force, Coulomb interaction or carried out in a relativistic regime.
Occurrence and Global Properties of Narrow CIV lambda 1549 Absorption Lines in Moderate-Redshift Quasars
Creators: name: Vestergaard, M.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: A statistical study is presented of (a) the frequency of narrow CIV lambda 1549 absorption lines in 1.5 ~50%) of narrow CIV absorbers is detected for the radio-quiet and radio-loud quasars, and a constant ~25% of all the quasars, irrespective of radio type display associated CIV absorbers stronger than a rest equivalent width of 0.5A. Both radio-quiet and radio-loud quasars with narrow absorption lines have systematically redder continua, especially strongly absorbed objects. There is evidence of inclination dependent dust reddening and absorption for the radio quasars. An additional key result is that the most strongly absorbed radio quasars have the largest radio source extent. This result is in stark contrast to a recent study of the low-frequency selected Molonglo survey in which a connection between the strength of the narrow absorbers and the (young) age of the radio source has been proposed. The possible origin of these discrepant results is discussed and may be related to the higher source luminosity for the quasars studied here.
description: 28 pages, including 10 figures and 8 tables. To appear in ApJ, 599, December 2003
Additional file 14 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening
Creators: name: Cramer, Grant
name: Cochetel, Noé
name: Ghan, Ryan
name: Destrac-Irvine, Agnès
name: Delrot, Serge
Publisher: name: figshare
Year: 2020
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Plant Biology
subject: Computational Biology

description: Additional file 14. Transcript profiles of ABA biosynthesis and signaling genes that are differentially expressed between BOD and RNO berry skins.
Cymonomus aequilonius Dell 1971
Creators: name: Ahyong, Shane T.
Publisher: name: Zenodo
Year: 2008
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Decapoda
Cymonomidae
Cymonomus
Cymonomus aequilonius

description: Cymonomus aequilonius Dell, 1971
(Fig. 1F)
 Cymonomus aequilonius Dell, 1971: 59–61, figs 11–15 [type locality: NE of Mayor Island, Bay of Plenty, New Zealand, 37°10’S, 176°23.5’E, 731 m]. — McLay 1988: 92, fig. 17. — Ahyong & Brown 2003: 1372.
 Material examined. Tims Bank, S of Ritchie Hill: NIWA 34966, 1 male (cl 5.9 mm, cw 4.8 mm), 1 female (cl 7.7 mm, cw 6.7 mm), 40°01.29–01.20’S, 178°04.15–04.09’E, 797–804 m, KAH9907/01, 1 Jun 1999.
 Mernoo Bank, Chatham Rise: NIWA 16829, 1 ovigerous female (cl 8.9 mm, cw 8. 2 mm), 44°20.0’S, 173°54.2’E, 675 m, S0161, 28 Oct 1979.
 Remarks. The three specimens reported here represent the first records of C. aequilonius since it was first described, extending the known range south to the Chatham Rise. Among the three species of Cymonomus known from New Zealand, C. aequilonius is distinctive in its rostral length — longer than rather than distinctly shorter than the eyestalks.
 Distribution. Eastern New Zealand: Bay of Plenty south to the Chatham Rise; 675– 804 m.
description: Published as part of Ahyong, Shane T., 2008, Deepwater crabs from seamounts and chemosynthetic habitats off eastern New Zealand (Crustacea: Decapoda: Brachyura), pp. 1-72 in Zootaxa 1708 (1) on pages 12-13, DOI: 10.11646/zootaxa.1708.1.1, http://zenodo.org/record/5107434
Putting a Spin on Language: A Quantum Interpretation of Unary Connectives for Linguistic Applications
Creators: name: Correia, Adriana D.
name: Stoof, Henk T. C.
name: Moortgat, Michael
Publisher: name: arXiv
Year: 2020
Subjects: subject: Computation and Language (cs.CL)
subject: Logic in Computer Science (cs.LO)
subject: Quantum Physics (quant-ph)
subject: FOS: Computer and information sciences
subject: FOS: Physical sciences

description: Extended versions of the Lambek Calculus currently used in computational linguistics rely on unary modalities to allow for the controlled application of structural rules affecting word order and phrase structure. These controlled structural operations give rise to derivational ambiguities that are missed by the original Lambek Calculus or its pregroup simplification. Proposals for compositional interpretation of extended Lambek Calculus in the compact closed category of FVect and linear maps have been made, but in these proposals the syntax-semantics mapping ignores the control modalities, effectively restricting their role to the syntax. Our aim is to turn the modalities into first-class citizens of the vectorial interpretation. Building on the directional density matrix semantics, we extend the interpretation of the type system with an extra spin density matrix space. The interpretation of proofs then results in ambiguous derivations being tensored with orthogonal spin states. Our method introduces a way of simultaneously representing co-existing interpretations of ambiguous utterances, and provides a uniform framework for the integration of lexical and derivational ambiguity.
description: In Proceedings QPL 2020, arXiv:2109.01534
title: Préface_Manuel de l'amateur de reliures armoriées françaises . Vingt-cinquième série
Creators: name: AmateurS
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2021

description: Préface
description: ID_PARA_00987
Structural analysis of disk super star clusters of M82: size and profile shape at intermediate ages
Creators: name: Cuevas-Otahola, B.
name: Mayya, Y. D.
name: Puerari, I.
name: Rosa-Gonzalez, D.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences
subject: 85

description: We present the structural parameters of 99 Super Star Clusters (SSCs) in the Disk of M82. Moffat-EFF, King and Wilson models were fitted using a chi^2 minimisation method to background-subtracted Surface Brightness Profiles (SBPs) in F435W (B), F555W (V), and F814W (I) bands of the Advanced Camera for Surveys (ACS) of the Hubble Space Telescope (HST). The majority of the SSC profiles is best-fitted by the Moffat-EFF profile. The scale parameter rd and the shape parameter gamma in the three filters are identical within the measurement errors. The analysed sample is big enough to allow characterisation of the distributions of core radii Rc and gamma. The obtained distribution of Rc follows a log-normal form, with center and sigma(log(Rc/pc)) being 1.73 pc and 0.25, respectively. The gamma distribution is also log-normal with center and sigma(log(gamma)) being 2.88 and 0.08, respectively. M82 is well-known for the absence of current star formation in its disk, with all disk SSCs older than 50 Myr and hardly any cluster older than ~300 Myr. The derived distributions compare very well with the distributions for intermediate-age clusters in the Large Magellanic Cloud (LMC), which is also a low-mass late-type galaxy similar to M82. On the other hand, the distributions of Rc in both these galaxies are shifted towards larger values as compared to SSCs of similar age in the giant spiral galaxy M83. M82 and LMC also span a narrower range of gamma values as compared to that in M83.
description: Accepted in MNRAS, 17 pages
Controlling chaos in area-preserving maps
Creators: name: Chandre, Cristel
name: Vittot, Michel
name: Elskens, Yves
name: Ciraolo, Guido
name: Pettini, Marco
Publisher: name: arXiv
Year: 2004
Subjects: subject: Chaotic Dynamics (nlin.CD)
subject: FOS: Physical sciences

description: We describe a method of control of chaos that occurs in area-preserving maps. This method is based on small modifications of the original map by addition of a small control term. We apply this control technique to the standard map and to the tokamap.
Additional file 1 of Fluorescent amplification for next generation sequencing (FA-NGS) library preparation
Creators: name: Chiniquy, Jennifer
name: Garber, Megan
name: Aindrila Mukhopadhyay
name: Hillson, Nathan
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 1: Figure S1. Standard NGS and FA-NGS Workflow Comparison: Side-by-side comparison of the Standard NGS workflow (left) and modified FA-NGS workflow (right) highlights how FA-NGS can save time and hands on steps in preparing NGS libraries
Homicide rates in Brazilian state of Rondônia: comparison between 1980-1989 and 2008-2017
Creators: name: Raimondi, Ana Carolina
name: Raimondi, Antonio Marcos
Publisher: name: F1000 Research Limited
Year: 2019

description: The aim of this study is comparing the homicide rates between 1980-1989 and 2008-2017 in Brazilian State of Rondônia.
Additional file 13 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening
Creators: name: Cramer, Grant
name: Cochetel, Noé
name: Ghan, Ryan
name: Destrac-Irvine, Agnès
name: Delrot, Serge
Publisher: name: figshare
Year: 2020
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Computational Biology

description: Additional file 13. A model of the peripheral genes including light sensing genes that interact with core circadian clock genes in BOD and RNO berry skins. Lines represent gene interactions as described in Additional file 12. Red and blue lightning bolts represent the reception of their respective light wavelengths for each gene symbol. Transcript profiles outlined in red highlight significantly higher transcript abundance for the BOD berries.
On the way to understanding the evolutionary history of Deuterostomia
Creators: name: Natsidis, Paschalis
name: Schiffer, Philipp
name: Telford, Maximillian
Publisher: name: F1000 Research Limited
Year: 2019

description: Deuterostomia is one of the two major groups of bilaterian animals. Their monophyly is well-supported in multiple past studies. However, a recent phylogenomics analysis designed to reduce misleading phylogenetic signals repeatedly recovered a polyphyletic Deuterostomia.
Here we aim to sequence and characterisethe genomes of two members of Deuterostomia in order to investigate the evolutionary history of this group using, among others, gene content information.
Candidate Type II Quasars from the Sloan Digital Sky Survey: I. Selection and Optical Properties of a Sample at 0.3
Creators: name: Zakamska, Nadia L.
name: Strauss, Michael A.
name: Krolik, Julian H.
name: Collinge, M. J.
name: Hall, P. B.
name: Hao, L.
name: Heckman, T. M.
name: Ivezic, Z.
name: Richards, G. T.
name: Schlegel, D. J.
name: Schneider, D. P.
name: Strateva, I.
name: Berk, D. E. Vanden
name: Anderson, S. F.
name: Brinkmann, J.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Type II quasars are the long-sought luminous analogs of type II (narrow emission line) Seyfert galaxies, suggested by unification models of active galactic nuclei (AGN) and postulated to account for an appreciable fraction of the cosmic hard X-ray background. We present a sample of 291 type II AGN at redshifts 0.3
description: Accepted to AJ (November issue), 46 pages including 2 tables and 15 figures, the full version of Table 1 is available at http://www.astro.princeton.edu/~nadia/qso2.html
Additional file 1 of Sex differences in muscle activity and motor variability in response to a non-fatiguing repetitive screwing task
Creators: name: Luger, Tessy
name: Seibt, Robert
name: Rieger, Monika
name: Steinhilber, Benjamin
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Computational Biology

description: Additional file 1: Table S1. The values for the different levels of muscle activity for men and women. IQR = interquartile range; RMS10 = 10th percentile or static muscle activity; RMS50 = 50th percentile or median muscle activity; RMS90 = 90th percentile or peak muscle activity; RVE = reference voluntary electrical activity.
Isotomodella alticola
Creators: name: Thibaud, Jean-Marc
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Collembola
Entomobryomorpha
Isotomidae
Isotomodella
Isotomodella alticola

description: Isotomodella alticola (Bagnall, 1949)
Pseudanurophorus alticolus Bagnall, 1949c: 59.
Isotomodella alticola – Potapov & Stebaeva 2002: 443.
DISTRIBUTION. — Hérault. Sableslittoraux, dunesdela Grande- Motte (Thibaud 1995).
Meurthe-et-Moselle. Picard 1962 (Anurophorus alticola).
ÉCOLOGIE. — Picard 1962 (faune psammique).
description: Published as part of Thibaud, Jean-Marc, 2017, Catalogue des collemboles de France, pp. 297-436 in Zoosystema 39 (3) on page 359, DOI: 10.5252/z2017n3a1, http://zenodo.org/record/5496272
Additional file 12 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening
Creators: name: Cramer, Grant
name: Cochetel, Noé
name: Ghan, Ryan
name: Destrac-Irvine, Agnès
name: Delrot, Serge
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases
subject: Plant Biology

description: Additional file 12. Transcript abundance of circadian clock genes from BOD and RNO berry skins. The data are placed on a circadian clock model derived from [4]. Lines in the model represent known interactions between genes; red arrows are positive interactions, black lines are negative interactions, and blue lines indicate direct physical interactions but the direction, positive or negative, is unknown. No lines indicate that there are no known interactions at this time. Transcript profiles outlined in red highlight significantly higher transcript abundance for the BOD berries.
Direct observation of deterministic macroscopic entanglement
Creators: name: Kotler, Shlomi
name: Peterson, Gabriel A.
name: Shojaee, Ezad
name: Lecocq, Florent
name: Cicak, Katarina
name: Kwiatkowski, Alex
name: Geller, Shawn
name: Glancy, Scott
name: Knill, Emanuel
name: Simmonds, Raymond W.
name: Aumentado, José
name: Teufel, John D.
Publisher: name: arXiv
Year: 2020
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Quantum entanglement of mechanical systems emerges when distinct objects move with such a high degree of correlation that they can no longer be described separately. Although quantum mechanics presumably applies to objects of all sizes, directly observing entanglement becomes challenging as masses increase, requiring measurement and control with a vanishingly small error. Here, using pulsed electromechanics, we deterministically entangle two mechanical drumheads with masses of 70 pg. Through nearly quantum-limited measurements of the position and momentum quadratures of both drums, we perform quantum state tomography and thereby directly observe entanglement. Such entangled macroscopic systems are uniquely poised to serve in fundamental tests of quantum mechanics, enable sensing beyond the standard quantum limit, and function as long-lived nodes of future quantum networks.
description: 42 pages, 3 main figures, supplementary materials: text, 4 figures, 3 tables, 7 references
Characterization of α-Galactooligosaccharides formed via Heterologous Expression of α- 2 Galactosidases from Lactobacillus reuteri in Lactococcus lactis
Creators: name: Wang, Yvonne; Black, Brenna A.; Curtis, Jonathan M.; Gänzle, Michael G.
Publisher: name: University of Alberta Libraries
Year: 2014

Abstract
Local Equation of State and Velocity Distributions of a Driven Granular Gas
Creators: name: Herbst, Olaf
name: Müller, Peter
name: Otto, Matthias
name: Zippelius, Annette
Publisher: name: arXiv
Year: 2004
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: We present event-driven simulations of a granular gas of inelastic hard disks with incomplete normal restitution in two dimensions between vibrating walls (without gravity). We measure hydrodynamic quantities such as the stress tensor, density and temperature profiles, as well as velocity distributions. Relating the local pressure to the local temperature and local density, we construct a local constitutive equation. For strong inelasticities the local constitutive relation depends on global system parameters, like the volume fraction and the aspect ratio. For moderate inelasticities the constitutive relation is approximately independent of the system parameters and can hence be regarded as a local equation of state, even though the system is highly inhomogeneous with heterogeneous temperature and density profiles arising as a consequence of the energy injection. Concerning the local velocity distributions we find that they do not scale with the square root of the local granular temperature. Moreover the high-velocity tails are different for the distribution of the x- and the y-component of the velocity, and even depend on the position in the sample, the global volume fraction, and the coefficient of restitution.
description: 14 pages, 14 figures of which Figs. 13a-f and Fig. 14 are archived as separate .gif files due to upload-size limitations. A version of the paper including all figures in better quality can be downloaded at http://www.theorie.physik.uni-goettingen.de/~herbst/download/LocEqSt.ps.gz (3.8 MB, ps.gz) or at http://www.theorie.physik.uni-goettingen.de/~herbst/download/LocEqSt.pdf (4.9 MB, pdf)
Isothermic and S-Willmore Surfaces as Solutions to Blaschke's Problem
Creators: name: Ma, Xiang
Publisher: name: arXiv
Year: 2004
Subjects: subject: Differential Geometry (math.DG)
subject: FOS: Mathematics
subject: 53A05 (53A30, 53A55)

description: We consider the generalization of classical Blaschke's Problem to higher codimension case, characterizing Darboux pair of isothermic surfaces and dual S-Willmore surfaces as the only non-trivial surface pairs that envelop a 2-sphere congruence and conformally correspond to each other. When the sphere congruence is the mean curvature spheres of one envelop surface, it must be a cmc-1 surface in hyperbolic 3-space, or a S-Willmore surface. A study of conformally immersed surface pairs is indicated with discussion on the geometric meaning of new invariants.
description: 11 pages
A comparison of succession in post-industrial ecosystems (PIEs) and old-fields using aerial photos
Creators: name: Spiering, David
name: Larsen, Chris P.S.
name: Potts, Daniel
Publisher: name: F1000 Research Limited
Year: 2019

description: Post-industrial ecosystems (PIEs) occur where plants and animals spontaneously arrive and establish communities on former industrial sites. PIEs can enhance biodiversity, but they are highly dynamic ecosystems with changing habitat value for species, as well as ecosystem function and services (Bonthoux et al. 2014). There is limited research on PIEs compared to other types of abandoned land such as old-fields.
Pathways of succession in PIEs are largely unknown but limited published research reports variability. In contrast, old-fields in temperate latitudes follow a broadly consistent pattern of dominance by herbaceous and then woody plants (Cramer & Hobbs 2007). Given the intensity and extent of industrial disturbances that lead to the formation of PIEs, it is possible that abiotic and biotic thresholds associated with altered soil conditions, impoverished or nonexistent soil seed banks, and limited opportunities for seed dispersal, may lead to either stalled succession or novel vegetation communities, such as occurs on old-fields following extremely intensive farming (Cramer et al. 2008).
Successional rates in PIEs are unknown. Old-fields become communities dominated by woody species in only a few decades (Meiners et al. 2007). The presence of brick, rubble and other waste material (Schadek et al. 2009) may lead to slower rates of succession in PIEs than in old-fields. Also, possible higher levels of soil resources in old-fields compared to PIEs can lead to more rapid competitive exclusion and thus faster rates of succession (Pickett et al. 2009).
We used a novel methodology that combined a chronosequence with a time series of repeat aerial photos, and used those data to parameterize two state-transition models of PIE succession. We compared these results with published literature on PIEs and old-fields, and make the following two predictions.
1. PIEs will follow a successional pattern similar to old-fields, of bare ground to herbaceous cover to woody cover.
2. The rate of succession will be slower in PIEs than in old-fields due to the extreme conditions that can occur in PIEs.
Stability of Quantum Motion: Beyond Fermi-golden-rule and Lyapunov decay
Creators: name: Wang, Wen-ge
name: Casati, G.
name: Li, Baowen
Publisher: name: arXiv
Year: 2003
Subjects: subject: Quantum Physics (quant-ph)
subject: Condensed Matter (cond-mat)
subject: Chaotic Dynamics (nlin.CD)
subject: FOS: Physical sciences

description: We study, analytically and numerically, the stability of quantum motion for a classically chaotic system. We show the existence of different regimes of fidelity decay which deviate from Fermi Golden rule and Lyapunov decay.
description: 5 pages, 5 figures
Isotomodes bisetosus Cassagnau 1959
Creators: name: Thibaud, Jean-Marc
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Collembola
Entomobryomorpha
Isotomidae
Isotomodes
Isotomodes bisetosus

description: Isotomodes bisetosus Cassagnau, 1959 **
Isotomodes bisetosus Cassagnau, 1959b: 84.
DISTRIBUTION. — Hautes-Pyrénées. Orédon, 1800- 2300 m (Cassagnau 1959b, 1961).
Indre. Parc régional de la Brenne (Ponge et al. 2008).
Tarn, Aude. Montagne Noire (Cassagnau 1965).
ÉCOLOGIE. — Cassagnau 1965 (écologie, sol); Ponge etal. 2008 (test perturbation environnement).
description: Published as part of Thibaud, Jean-Marc, 2017, Catalogue des collemboles de France, pp. 297-436 in Zoosystema 39 (3) on page 359, DOI: 10.5252/z2017n3a1, http://zenodo.org/record/5496272
Gandalfus puia McLay 2007
Creators: name: Ahyong, Shane T.
Publisher: name: Zenodo
Year: 2008
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Decapoda
Bythograeidae
Gandalfus
Gandalfus puia

description: Gandalfus puia McLay, 2007
(Fig. 5C)
 Gandalfus puia McLay, 2007: 5–9, figs 1A–F, 2A–G, 3A–B, 4A–B, 5A–D [type locality: Rumble III Seamount, outer Bay of Plenty, New Zealand].
 Material examined. Macauley Caldera: NIWA 18017, male paratype (cl 20.6 mm), 30°12.78’S, 181°33.04’E, 337 m, KOK0505/22, 12 Apr 2005; NIWA 18018, 2 males (cl 11.6–22.6 mm; larger damaged), 30°12.78’S, 181°33.04’E, 337 m, KOK0505/22, 12 Apr 2005.
 Brothers Seamount: NIWA 18019, female paratype (cl 22.4 mm), 34°51.70’S, 179°03.58’E, 1647 m, KOK0506/32, 2 May 2005.
 Rumble III Seamount: NIWA 28855, holotype male (cl 15.5 mm), 35°44.22–44.04’S, 178°29.72–29.63’E, 239–270 m, TAN0107/128, Z10782, 21 May 2005.
 Remarks. Gandalfus puia was recently described in detail by McLay (2007) from specimens collected at hydrothermal vents on Rumble III and Brothers seamounts in the outer Bay of Plenty, and the Macauley Caldera (Kermadec Islands).
 Distribution. The Kermadec Ridge, ranging from the outer Bay of Plenty to the Kermadec Islands; 239– 1647 m.
description: Published as part of Ahyong, Shane T., 2008, Deepwater crabs from seamounts and chemosynthetic habitats off eastern New Zealand (Crustacea: Decapoda: Brachyura), pp. 1-72 in Zootaxa 1708 (1) on page 26, DOI: 10.11646/zootaxa.1708.1.1, http://zenodo.org/record/5107434
Testing the optimistic-pessimistic hypothesis in the Central Amazon
Creators: name: Vaz, Marcel C.
Publisher: name: F1000 Research Limited
Year: 2019

description: Does adult stature of a tree species determine how its saplings behave in the understory? A long-held hypothesis states that saplings of canopy or emergent trees should invest disproportionally into growing tall (optimistic strategy), while those of understory species should start expanding their crown early on (pessimistic strategy). Implicit is the assumption that there is a height-growth, crown-expansion trade-off. Although prior evidence suggests this might be the case, we lack a community-wide test of this hypothesis and assumption, especially in hyperdiverse forests. We sampled 915 saplings from 396 species with diameter at breast height (D) between 1 and 5 cm found in mature stands on the plateau of a 25-ha permanent plot near Manaus, Brazil. For each sapling, we measured plant height and the crown's major and minor projected horizontal axes. Because larger saplings are taller and have wider crowns, we used D to control for their size. For each species, we estimated adult size as the 97.5 percentile of the D distribution in the plot. To test for a vertical-horizontal growth trade-off, we ran a hierarchical, multivariate Bayesian analysis which estimated species-specific relationships (power-law models) between D and height (H-D), and between D and mean crown width (W-D).

After taking saplings' size into account, height and width were negatively correlated, indicating a within-species height-growth, crown-expansion trade-off. This trade-off, however, is not evident between species as H-D parameters were not correlated to any W-D parameters. This indicates that while some species' saplings are both taller and wider than average given their size, others do poorly in both dimensions, which possibly reflects fitness differences among species. Additionally, species-specific slopes were strongly negatively correlated to their intercepts for both H-D and W-D, indicating that species that have a head start in H or W will have a slower long-term growth in that dimension compared to species that start smaller. At the community level, H-D and W-D estimated slopes were both 0.75, the scaling factor predicted by metabolic theory. Finally, adult size was a poor predictor of sapling growth strategies, in accordance with our own observation that some local understory species show clear optimistic strategies while some canopy species present the opposite strategy. Our results therefore undermine the view that saplings behave according to their future adult stature and nuance an intricate, yet more intriguing story about how saplings grow and interact with each other in the understory of tropical forests.
Debris disks around stars in the NIKA2 era
Creators: name: Lestrade, J. -F.
name: Augereau, J. -C.
name: Booth, M.
name: Adam, R.
name: Ade, P.
name: Andre, P.
name: Andrianasolo, A.
name: Aussel, H.
name: Beelen, A.
name: Benoit, A.
name: Bideaud, A.
name: Bourrion, O.
name: Calvo, M.
name: Catalano, A.
name: Comis, B.
name: De Petris, M.
name: Desert, F. -X.
name: Doyle, S.
name: Driessen, E. F. C.
name: Gomez, A.
name: Holland, J. Goupy W.
name: Keruzore, F.
name: Kramer, C.
name: Ladjelate, B.
name: Lagache, G.
name: Leclercq, S.
name: Lefevre, C.
name: Macias-Perez, J. F.
name: Mauskopf, P.
name: Mayet, F.
name: Monfardini, A.
name: Perotto, L.
name: Pisano, G.
name: Ponthieu, N.
name: Reveret, V.
name: Ritacco, A.
name: Romero, C.
name: Roussel, H.
name: Ruppin, F.
name: Schuster, K.
name: Shu, S.
name: Sievers, A.
name: Thebault, P.
name: Tucker, C.
name: Zylka, R.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: The new NIKA2 camera at the IRAM 30m radiotelescope was used to observe three known debris disks in order to constrain the SED of their dust emission in the millimeter wavelength domain. We have found that the spectral index between the two NIKA2 bands (1mm and 2mm) is consistent with the Rayleigh-Jeans regime (lambda^{-2}), unlike the steeper spectra (lambda^{-3}) measured in the submillimeter-wavelength domain for two of the three disks $-$ around the stars Vega and HD107146. We provide a succesful proof of concept to model this spectral inversion in using two populations of dust grains, those smaller and those larger than a grain radius a0 of 0.5mm. This is obtained in breaking the slope of the size distribution and the functional form of the absorption coefficient of the standard model at a0. The third disk - around the star HR8799 - does not exhibit this spectral inversion but is also the youngest.
description: 6 pages, 8 figures, to appear in the proceedings of the international conference entitled mm Universe @ NIKA2, Grenoble (France), June 2019, EPJ Web of conferences
FUSE Survey of the Local Interstellar Medium within 200 Parsec
Creators: name: Lehner, N.
name: Jenkins, E. B.
name: Gry, C.
name: Moos, H. W.
name: Chayer, P.
name: Lacour, S.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present FUSE observations of the interstellar gas toward 30 white dwarf and 1 subdwarf (SdO) stars. These sightlines probe the Local Bubble (LB) and the local interstellar medium (LISM) near the LB. Our survey detected only diffuse H_2 molecular clouds along six sightlines. There is no evidence from this study that H_2 exists well inside the perimeter of the LB. The kinematical temperature for H_2 is less than the usual temperature observed in the local interstellar clouds, implying different gas phases in the LISM. The relative abundance ratios of Si II, P II, and Fe II give insight about the dust content. These ratios vary, but are similar to the depletion patterns observed in warm and halo diffuse clouds in more distant sightlines in the Galaxy. The N I/O I and Ar I/O I ratios are significantly subsolar within the LB. Outside the LB a larger scatter is observed from subsolar to solar. Because Ar and N are only weakly depleted into dust grains if at all, the deficiencies of their neutral forms are likely due to photoionization. The evidence for significant ionization of N (and hence Ar) is strengthened by the detection and measurement of N II, which is a dominant ion for this element toward many sightlines. These observations imply that photoionization is the main ionization mechanism in the LISM and do not support the existence of a highly ionized condition in the past. In view of the variations observed in the different atomic and ionic ratios, the photoionization conditions vary significantly in the LB and the LISM. [Abridged.]
description: Accepted for publication in the ApJ
MPEC 2024-U12 : 2024 UB
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2024
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469
subject: 2024 UB

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
Cryptic diversity in the inshore hagfish, Eptatretus burgeri (Myxinidae, Pisces) from the northwest Pacific
Creators: name: Song, Young Sun
name: Seung-Eun Bae
name: Jung-Ha Kang
name: Jung-Youn Park
name: Jin-Koo Kim
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: Marine Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy

description: The fishery of inshore hagfish (Eptatretus burgeri) is particularly important from the perspective of the eel-skin leather industry in the northwest Pacific. In order to reveal the genetic diversity and population structure of E. burgeri in the northwest Pacific, we analyzed partial nucleotide sequences of three mitochondrial DNA regions (523 bp in COI, 712 bp in ND4 and 617 bp in Cytb) based on specimens collected from six locations in Korea and Japan. The genetic diversities of E. burgeri were higher in Korean locations compared to Japanese ones. AMOVA showed that E. burgeri was completely separated into two groups (group A: southern coast of Korea and western coast of Japan vs. group B: eastern coast of Japan). Furthermore, groups A and B were divided into each two lineages (lineage I: west southern coast of Korea, lineage II: east southern coast of Korea and western coast of Japan, lineage III and IV: eastern coast of Japan). Our molecular results suggest that these two groups and lineages of E. burgeri may be different evolutionary significant unit and management unit, respectively.
On Solving Cycle Problems with Branch-and-Cut: Extending Shrinking and Exact Subcycle Elimination Separation Algorithms
Creators: name: Kobeaga, Gorka
name: Merino, María
name: Lozano, Jose A.
Publisher: name: arXiv
Year: 2020
Subjects: subject: Data Structures and Algorithms (cs.DS)
subject: Combinatorics (math.CO)
subject: FOS: Computer and information sciences
subject: FOS: Mathematics
subject: 05C38, 90C10, 90C57

description: In this paper, we extend techniques developed in the context of the Travelling Salesperson Problem for cycle problems. Particularly, we study the shrinking of support graphs and the exact algorithms for subcycle elimination separation problems. The efficient application of the considered techniques has proved to be essential in the Travelling Salesperson Problem when solving large size problems by Branch-and-Cut, and this has been the motivation behind this work. Regarding the shrinking of support graphs, we prove the validity of the Padberg-Rinaldi general shrinking rules and the Crowder-Padberg subcycle-safe shrinking rules. Concerning the subcycle separation problems, we extend two exact separation algorithms, the Dynamic Hong and the Extended Padberg-Grötschel algorithms, which are shown to be superior to the ones used so far in the literature of cycle problems. The proposed techniques are empirically tested in 24 subcycle elimination problem instances generated by solving the Orienteering Problem (involving up to 15112 vertices) with Branch-and-Cut. The experiments suggest the relevance of the proposed techniques for cycle problems. The obtained average speedup for the subcycle separation problems in the Orienteering Problem when the proposed techniques are used together is around 50 times in medium-sized instances and around 250 times in large-sized instances.
description: 23 pages + 3 appendices
MOESM1 of CD147 as a key mediator of the spleen inflammatory response in mice after focal cerebral ischemia
Creators: name: Jin, Rong
name: Zhong, Wei
name: Liu, Shan
name: Li, Guohong
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Neuroscience
subject: Environmental Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Hematology

description: Additional file 1: Figure S1. Representative dot-plots illustrate the flow cytometry gating strategy for identification of microglia and macrophages in the brain. Ly-6G- immune cells were selected for FACS analysis and both microglia (CD11b + CD45low) and macrophages (CD11b + CD45high) were sorted. All cells were sorted twice to maximize cell purity and used for RT-qPCR. Table S1. The number of animals used in this study.
Additional file 11 of A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening
Creators: name: Cramer, Grant
name: Cochetel, Noé
name: Ghan, Ryan
name: Destrac-Irvine, Agnès
name: Delrot, Serge
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Additional file 11. Representative examples of transcript profiles of some stilbene synthase (STS) genes that were differentially expressed.
Additional file 10 of Fluorescent amplification for next generation sequencing (FA-NGS) library preparation
Creators: name: Chiniquy, Jennifer
name: Garber, Megan
name: Aindrila Mukhopadhyay
name: Hillson, Nathan
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Pharmacology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Plant Biology
subject: Computational Biology

description: Additional file 10: Figure S10. Continuous fluorescence measurements of qPCR: RFU values per cycle number are plotted for 96 plasmid libraries (A) and 96 gDNA libraries (B)
Taxonomic identity of four groups of Glandirana rugosa (Anura, Ranidae) in Japan revealed by the complete mitochondrial genome sequence analysis
Creators: name: Mochizuki, Masatake
name: Nakamura, Yoriko
name: Nakamura, Masahisa
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: 60506 Virology

description: The Japanese Glandirana rugosa phylogenetically consists of four groups. However, the taxonomic identity of these groups still remains unclear. We determined the complete mitogenome sequences of the four groups of G. rugosa. The mitogenomes were 17,394–17,781 bp in length. The phylogenetic analysis clearly showed that the genus Glandirana is monophyletic and that the four groups of G. rugosa are separated into two clusters: one cluster represents G. rugosa, the other cluster may represent a different species.