cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Condemned Area Chart [1-10] - 1972
Creators: name: No Name Supplied
Publisher: name: New Jersey Department of Environmental Protection (NJDEP)
Year: 1972

description: This chart, part of a series published annually, is a graphic representation of the classification regulations which delineate shellfish growing waters in New Jersey.  Other charts in this series were published as Approved Area Charts: Shellfish Growing Water Classification, New Jersey Water Resources: Shellfish Condemned Area Charts and Shellfish Growing Water Classification Charts.  These classifications result from surveys conducted by the New Jersey Department of Environmental Protection's (NJDEP) Bureau of Marine Water Monitoring, in accordance with the Food and Drug Administration as well as the National Shellfish Sanitation Program guidelines and regulations.  Waters are characterized in one of four ways: approved, seasonal, special restricted and prohibited.  Additional information contained in each year's chart package includes a summary of the changes in water classifications, harvest regulations, as well as other general information that is important for anyone interested in harvesting shellfish in New Jersey.
Acrocercops cyclogramma Meyrick 1921, n. sp.
Creators: name: Prins, Jurate De
name: Brito, Rosângela
name: Moreira, Gilson Rudinei Pires
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Gracillariidae
Acrocercops
Acrocercops cyclogramma

description: Acrocercops cyclogramma Meyrick, 1921
" Acrocercops cyclogramma, n. sp. "— Meyrick, E. 1921. Exotic Microlepidoptera (Marlborough) 2(15): 466. Type locality: Peru, Iquitos.
Type specimens: Holotype ♂, BMNH.
Distribution: Peru (Meyrick 1921: 466).
Larval hostplant(s): Unknown.
description: Published as part of Prins, Jurate De, Brito, Rosângela & Moreira, Gilson Rudinei Pires, 2016, An annotated taxonomic checklist of the Neotropical Gracillariidae (Lepidoptera) with links to the information on host plants and parasitoids, pp. 1-51 in Zootaxa 4158 (1) on page 8, DOI: 10.11646/zootaxa.4158.1.1, http://zenodo.org/record/255480
Analysis of CXCL16/CXCR6 in T cell migration and development
Creators: name: University Of California Office Of The President
Publisher: name: University of California Office of the President
publisherIdentifier: https://ror.org/00dmfq477
publisherIdentifierScheme: ROR
Year: 2024

description: Proper migration in response to microenvironmental cues is important for normal cell and tissue development. Conversely, improper cell migration can contribute to the development of metastatic cancer. Many tumor types express higher than normal levels of chemokine ligands and receptors. CXCL16 is a chemokine ligand that can serve as both chemoattractive and chemorepulsive agents in physiological and pathological situations. CXCL16 is upregulated in some cancers. Likewise, its receptor, CXCR6, is expressed on cells in both solid tumors and leukemias and is associated with metastasis and poor prognosis. However, the regulation of the process which activates CXCL16-mediated cell migration is incompletely understood. ADAM10 (Kuz) is a proteolytic enzyme that can cleave CXCL16 and activate cell migration. Interestingly, ADAM10 is also involved in the activation of signaling through Notch receptors. Notch signaling is dysregulated in many cancer types and is a novel target for new anti-cancer drugs. Our goal is to understand the roles of CXCL16 and CXCR6 in chemotactic migration in a normal tissue, to establish determinants of this migration, and to correlate this directed migration with cell differentiation. Using the mouse thymus as an experimental model, we will test the hypothesis that ADAM-10-activated-Notch signaling influences CXCR6 expression on T cells and that this expression regulates T cell migration during T cell differentiation. Methods include in vitro cell migration assays, fetal thymic organ cultures, immunofluorescent staining of thymus sections, gene expression analysis using quantitative PCR and cell surface marker expression using FACS. Overall, the results from the studies proposed in this project will confirm the hypothesis that Notch, ADAM10 and CXCR6 interactions are important for chemokine-mediated cell movement and set the stage for future studies to examine these interactions in malignancies where these partners are disrupted or overexpressed.
Condemned Area Chart [1-10] - 1973
Creators: name: No Name Supplied
Publisher: name: New Jersey Department of Environmental Protection (NJDEP)
Year: 1973

description: This chart, part of a series published annually, is a graphic representation of the classification regulations which delineate shellfish growing waters in New Jersey.  Other charts in this series were published as Approved Area Charts: Shellfish Growing Water Classification, New Jersey Water Resources: Shellfish Condemned Area Charts and Shellfish Growing Water Classification Charts.  These classifications result from surveys conducted by the New Jersey Department of Environmental Protection's (NJDEP) Bureau of Marine Water Monitoring, in accordance with the Food and Drug Administration as well as the National Shellfish Sanitation Program guidelines and regulations.  Waters are characterized in one of four ways: approved, seasonal, special restricted and prohibited.  Additional information contained in each year's chart package includes a summary of the changes in water classifications, harvest regulations, as well as other general information that is important for anyone interested in harvesting shellfish in New Jersey.
Condemned Area Chart [1-10] - 1974
Creators: name: No Name Supplied
Publisher: name: New Jersey Department of Environmental Protection (NJDEP)
Year: 1974

description: This chart, part of a series published annually, is a graphic representation of the classification regulations which delineate shellfish growing waters in New Jersey.  Other charts in this series were published as Approved Area Charts: Shellfish Growing Water Classification, New Jersey Water Resources: Shellfish Condemned Area Charts and Shellfish Growing Water Classification Charts.  These classifications result from surveys conducted by the New Jersey Department of Environmental Protection's (NJDEP) Bureau of Marine Water Monitoring, in accordance with the Food and Drug Administration as well as the National Shellfish Sanitation Program guidelines and regulations.  Waters are characterized in one of four ways: approved, seasonal, special restricted and prohibited.  Additional information contained in each year's chart package includes a summary of the changes in water classifications, harvest regulations, as well as other general information that is important for anyone interested in harvesting shellfish in New Jersey.
Role of S-nitroso-glutathione reductase in protection against carcinogenic N-nitrosamines
Creators: name: University Of California Office Of The President
Publisher: name: University of California Office of the President
publisherIdentifier: https://ror.org/00dmfq477
publisherIdentifierScheme: ROR
Year: 2024

description: Incidence and mortality for hepatocellular carcinoma (HCC), one of the most common human cancers worldwide, is increasing rapidly in the United States. Genes critical to hepatocarcinogenesis in most of the frequently altered chromosomal regions in HCC have not been identified, and etiologic mechanisms of HCC remain poorly understood. The inducible isoform of NO synthase (iNOS), responsible for high-output production of NO in inflammation and associated with nitrosative stress, is expressed at much elevated levels by hepatic cells in both chronic viral hepatitis (the major risk factor for HCC) and HCC. We recently found that S-nitroso-glutathione reductase (GSNOR), the major GSNO-metabolising activity, regulates the level of S-nitrosylation in vivo, and is critically important for protection against iNOS-derived nitrosative stress. We have generated GSNOR-/- mice as a genetic model to study the role of GSNOR in tumorigenesis. The overall goal of this proposal is to determine if GSNOR is critically important for protection against carcinogenic N-nitrosamines.
Acrocercops cymella Forbes 1931, new species
Creators: name: Prins, Jurate De
name: Brito, Rosângela
name: Moreira, Gilson Rudinei Pires
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Gracillariidae
Acrocercops
Acrocercops cymella

description: Acrocercops cymella Forbes, 1931
" Acrocercops cymella new species "— Forbes, W.T.M. 1931. Journal of the Department of Agriculture of
Porto Rico 15(4): 380–381; pl. 42, fig. 23.
Type locality: Porto Rico, Coamo Springs.
Type specimens: Type nr. 1062 (gender not stated), CU. Distribution: Puerto Rico (Forbes 1931: 381).
Larval hostplant(s): Unknown.
description: Published as part of Prins, Jurate De, Brito, Rosângela & Moreira, Gilson Rudinei Pires, 2016, An annotated taxonomic checklist of the Neotropical Gracillariidae (Lepidoptera) with links to the information on host plants and parasitoids, pp. 1-51 in Zootaxa 4158 (1) on page 8, DOI: 10.11646/zootaxa.4158.1.1, http://zenodo.org/record/255480
Cell-based neovascularization to treat irradiated bone defects
Creators: name: University Of California Office Of The President
Publisher: name: University of California Office of the President
publisherIdentifier: https://ror.org/00dmfq477
publisherIdentifierScheme: ROR
Year: 2024

description: We hypothesize that the local delivery of human endothelial progenitor cells to an irradiated bone defect can effectively promote the formation of a vasculature through angiogenesis and vasculogenesis and enhance bone regeneration. To test our hypothesis, we will complete a series of in vitro studies to characterize the proliferative, metabolic, and angiogenic behavior of these cells at various oxygen tensions. Endothelial colony forming cells (ECFCs), a highly proliferative subpopulation of cells isolated from human cord or peripheral blood, are seeded on polymeric scaffolds formed of poly(lactide-co-glycolide) and cultured in 1%, 3%, or 5% oxygen. Optimal cell loading is determined by examining various cell seeding densities. The capacity of ECFCs to form tubules throughout the scaffold is characterized by placing ECFC-seeded scaffolds in a collagen gel, culturing the constructs for 5 days, and then completing immunohistochemistry (CD31) to observe cellular arrangement. Innate cellular metabolic activity is monitored using a resazurin assay, and cell viability is observed using a LIVE/DEAD assay under confocal microscopy. After determination of the optimal cell seeding density for tubule formation, ECFC-seeded scaffolds are implanted into a bilateral irradiated calvarial defect in a nude rat. The irradiated cranial defect is a model of bone resection after irradiation therapy and provides two sites of treatment, allowing for an internal control (scaffolds lacking cells) in each animal. Neovascularization within the defect area is monitored using ultrasound (US) at 1, 2, and 3 weeks. Ultrasound results are verified by staining retrieved histological samples with human and rat anti-CD31 antibodies, thus allowing us to determine the contribution of human cells to vasculogenesis and validate the joining of human neovessels with rat host vessels. Bone regeneration within the defect area is monitored using microCT at 3, 8, and 12 weeks. The use of noninvasive imaging modalities (US, µCT) allows us to monitor tissue regeneration in the same cohort of animals. The results of these studies have tremendous implications with regards to treatment of malignant tumors by tissue resection subsequent to radiation therapy. As these cells (ECFCs) are readily isolated from peripheral or cord blood, this strategy could be an invaluable therapeutic approach to regenerating bone defects secondary to tumor resection using autologous cells as well as enhancing vascularization for numerous other therapies and clinical applica
Belone svetovidovi Collette & Parin 1970
Creators: name: Golani, Daniel
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Beloniformes
Belonidae
Belone
Belone svetovidovi

description: Belone svetovidovi Collette & Parin, 1970
Belone svetovidovi: Ben-Tuvia, 1971a; Golani, 1996; Golani, 2005.
description: Published as part of Golani, Daniel, 2021, An updated Checklist of the Mediterranean fishes of Israel, with illustrations of recently recorded species and delineation of Lessepsian migrants, pp. 1-108 in Zootaxa 4956 (1) on page 31, DOI: 10.11646/zootaxa.4956.1.1, http://zenodo.org/record/4691195
Role of the candidate breast tumor suppressor Mage-d1 in mammary gland development
Creators: name: University Of California Office Of The President
Publisher: name: University of California Office of the President
publisherIdentifier: https://ror.org/00dmfq477
publisherIdentifierScheme: ROR
Year: 2024

description: Many studies have shown that one of the first changes observed in the development of solid malignant tumors, such as breast tumors, is loss of normal tissue morphology. The large family of Mage genes is known primarily as tumor antigens, presented on the surface of cancer cells with major histocompatibility complex. The normal physiological roles of MAGE proteins, however, is elusive. Studies performed on cultured cells have implicated MAGE-D1 in an array of functions: as a transcriptional regulator of Dlx/Msx homeoproteins in cellular differentiation, as a pro-apoptotic signaling mediator downstream of p75 neurotrophin receptor and UNC5A, as regulator of BRCA2- dependent cell proliferation, and as regulator of cadherin-mediated cell adhesion. Absent from the literature has been the characterization of mice harboring homozygous mutations in Mage genes. In this application, we propose to evaluate the mammary gland phenotype of Mage-d1–/– animals. These animals are viable, but every pup must be foster nursed due to the lack of milk production in post-partum females. Our preliminary expression data demonstrate the expression of MAGE-D1, specifically in luminal epithelial cells. During development, the subcellular localization of MAGE-D1 appears to be dynamic, confined to the nucleus in some cells and in the cytoplasm of others. During lactation, MAGE-D1 is localized in the cytoplasm. Our preliminary analysis of the phenotype during ductal morphogenesis reveals lumens inappropriately filled with cells. Glands of lactating heterozygous animals reveal poorly developed alveoli and severely compromised milk production. The aim of this application is to elucidate the functional role of MAGE-D1 in mammary gland by analyzing the loss-of-function phenotypes. We propose to determine nuclear versus cytoplasmic localization of MAGE-D1 at all stages of gland development, using markers of different cell subtypes to define the cells that have nuclear versus cytoplasmic MAGE-D1. We also propose to histologically evaluate gland morphology, using specific antibodies to determine the status of target proteins implicated in MAGE-D1-dependent processes such as cell adhesion and differentiation. Finally, since we observe defects in cell number in Mage-d1-/- glands, we will assay cell proliferation and apoptosis to establish how excess cells are generated.
Condemned Area Chart [1-10] - 1975
Creators: name: No Name Supplied
Publisher: name: New Jersey Department of Environmental Protection (NJDEP)
Year: 1975

description: This chart, part of a series published annually, is a graphic representation of the classification regulations which delineate shellfish growing waters in New Jersey.  Other charts in this series were published as Approved Area Charts: Shellfish Growing Water Classification, New Jersey Water Resources: Shellfish Condemned Area Charts and Shellfish Growing Water Classification Charts.  These classifications result from surveys conducted by the New Jersey Department of Environmental Protection's (NJDEP) Bureau of Marine Water Monitoring, in accordance with the Food and Drug Administration as well as the National Shellfish Sanitation Program guidelines and regulations.  Waters are characterized in one of four ways: approved, seasonal, special restricted and prohibited.  Additional information contained in each year's chart package includes a summary of the changes in water classifications, harvest regulations, as well as other general information that is important for anyone interested in harvesting shellfish in New Jersey.
Condemned Area Chart [1-10] - 1976
Creators: name: No Name Supplied
Publisher: name: New Jersey Department of Environmental Protection (NJDEP)
Year: 1976

description: This chart, part of a series published annually, is a graphic representation of the classification regulations which delineate shellfish growing waters in New Jersey.  Other charts in this series were published as Approved Area Charts: Shellfish Growing Water Classification, New Jersey Water Resources: Shellfish Condemned Area Charts and Shellfish Growing Water Classification Charts.  These classifications result from surveys conducted by the New Jersey Department of Environmental Protection's (NJDEP) Bureau of Marine Water Monitoring, in accordance with the Food and Drug Administration as well as the National Shellfish Sanitation Program guidelines and regulations.  Waters are characterized in one of four ways: approved, seasonal, special restricted and prohibited.  Additional information contained in each year's chart package includes a summary of the changes in water classifications, harvest regulations, as well as other general information that is important for anyone interested in harvesting shellfish in New Jersey.
Acrocercops demotes Walsingham 1914, sp. n.
Creators: name: Prins, Jurate De
name: Brito, Rosângela
name: Moreira, Gilson Rudinei Pires
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Gracillariidae
Acrocercops
Acrocercops demotes

description: Acrocercops demotes Walsingham, 1914
" Acrocercops demotes, sp. n. "—Walsingham, Lord (Thomas de Grey). 1914. Biologia Centrali-Americana, Lepidoptera-Heterocera 4(1909–1915): 340; pl. 9, fig. 35.
Type locality: Mexico, Tabasco, Teapa.
Type specimens: Holotype ♂, coll. Walsingham nr. 66767, BMNH.
Distribution: Mexico (Walsingham 1914: 340).
Larval hostplant(s): Unknown.
description: Published as part of Prins, Jurate De, Brito, Rosângela & Moreira, Gilson Rudinei Pires, 2016, An annotated taxonomic checklist of the Neotropical Gracillariidae (Lepidoptera) with links to the information on host plants and parasitoids, pp. 1-51 in Zootaxa 4158 (1) on pages 8-9, DOI: 10.11646/zootaxa.4158.1.1, http://zenodo.org/record/255480
Augmenting anti-tumor immunity with novel cytokine complexes
Creators: name: University Of California Office Of The President
Publisher: name: University of California Office of the President
publisherIdentifier: https://ror.org/00dmfq477
publisherIdentifierScheme: ROR
Year: 2024

description: Immunotherapy can be effective in the treatment of select cancer patients with tumors resistant to conventional therapies. For example, the adoptive transfer of tumor-specific T cells, vaccination with tumor antigens, or CTLA4Ig treatment of patients with metastatic melanoma induces objective tumor regression in roughly one third of patients. These successes are particularly impressive because in some patients the responses are both complete and durable. Although these examples highlight the potential of immunotherapy, there are still significant limitations. Foremost, many cancers are not known to be amenable to current immunotherapy regimens. It is also unclear why immunotherapy is so effective but in a limited subset of patients; this may be associated with the tumor’s ability to either evade or suppress the host immune response. Advances in our understanding of how T cells and natural killer cells respond to cancer have made it feasible to consider alternative strategies for improving immune responses. In particular, the administration of exogenous cytokines can dramatically affect the proliferation, survival, and function of tumor-specific lymphocytes. By itself, IL-15 has shown efficacy in augmenting CD8+ T cell and natural killer responses in vivo in a number of systems. Surprisingly, it was recently found that the biological activity of IL-15 could be increased over 50-fold in mice by pre-complexing IL- 15 to its soluble receptor, sIL-15Ra. While this increase in activity was most pronounced for CD8+ memory T cells, enhanced responses in CD4+ memory T cells were also observed. Further, we find NK cell activity to be dramatically increased. In a collaborative pilot study, we have treated mice bearing pancreatic tumors with this cytokine complex and find rapid reduction in the number of tumors and their size. These results suggest that sIL-15Ra/IL-15 complexes provide a novel therapeutic modality for augmenting immune responses. This may be of particular value in the treatment of cancer, where the tumor cells may suppress or evade immunological responses. However, many questions are raised by these exciting preliminarly data. We hypothesize that administration of IL-15/IL-15Ra complexes will result in improved anti-tumor immunity. To assess this we will: Evaluate the ability of sIL-15/IL-15Ra complexes to augment anti-tumor immunity in a mouse model of metastatic breast cancer and investigate the in vivo cellular targets of complex treatment and anti-tumor activity.
Symbolism and significance of bronze rhomboid beads/pendants from Jenné and the Inland Niger Delta, Mali
Creators: name: Graham, Lloyd
Publisher: name: Academia.edu
Year: 2011
Subjects: subject: Body adornment
subject: Mali--Djenné Region
subject: Mali--Djenné
subject: Amulets
subject: Sculpture, Dogon
subject: Art, Dogon

description: Over the last century, numerous hollow bronze/brass rhomboid (i.e., lozenge or diamond-shaped) objects have been excavated from the Inland Niger Delta region of Mali. Cast using the cire perdue technique, these Jenné (Djenné) beads or pendants may date to any time from the 7th to the 19th centuries CE, but most likely to the 17-18th centuries. Their shape and ornamentation suggests a codified and potentially amuletic function. They resemble modern Tuareg amulets in shape, and their serpentine decorations recall the snakes on 13th-15th century CE Jenné-jeno terracottas, but ultimately their symbol repertoire dates back to prehistoric times. The minimalism of their design affords a wealth of interpretative possibilities: the rhomboid as a stylized snake-head, frog belly, human form, or symbol of female generative power. Most of the ornamental motifs – wavy lines, spirals, wheatsheaf/twist motifs – turn out to refer to snakes, so it is tempting to view the Jenné rhomboids as fertility amulets consisting of female shapes adorned with phallic motifs. However, sexual ambiguity pervades to the deepest level, and ultimately all of the symbols have female referents.
Acrocercops desmochares Meyrick 1921, n. sp.
Creators: name: Prins, Jurate De
name: Brito, Rosângela
name: Moreira, Gilson Rudinei Pires
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Gracillariidae
Acrocercops
Acrocercops desmochares

description: Acrocercops desmochares Meyrick, 1921
" Acrocercops desmochares, n. sp. "— Meyrick, E. 1921. Exotic Microlepidoptera (Marlborough) 2(15):
468–469.
Type locality: Brazil, Manaos.
Type specimens: Holotype ♀, BMNH.
Distribution: Brazil (Meyrick 1921: 469). Larval hostplant(s): Unknown.
description: Published as part of Prins, Jurate De, Brito, Rosângela & Moreira, Gilson Rudinei Pires, 2016, An annotated taxonomic checklist of the Neotropical Gracillariidae (Lepidoptera) with links to the information on host plants and parasitoids, pp. 1-51 in Zootaxa 4158 (1) on page 9, DOI: 10.11646/zootaxa.4158.1.1, http://zenodo.org/record/255480
Hyporhamphus picarti
Creators: name: Golani, Daniel
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Beloniformes
Hemiramphidae
Hyporhamphus
Hyporhamphus picarti

description: Hyporhamphus picarti (Valenciennes, 1846)
Hemirhamphus picarti: Hornell, 1935; Bodenheimer, 1937.
Hemiramphus gamberur: Ben-Tuvia, 1953a.
Hyporhamphus xanthopterus: Fowler & Steinitz, 1956.
Hyporhamphus picarti: Ben-Tuvia, 1971a; Golani, 1996; Golani, 2005.
EXOCOETIDAE
description: Published as part of Golani, Daniel, 2021, An updated Checklist of the Mediterranean fishes of Israel, with illustrations of recently recorded species and delineation of Lessepsian migrants, pp. 1-108 in Zootaxa 4956 (1) on page 32, DOI: 10.11646/zootaxa.4956.1.1, http://zenodo.org/record/4691195
New Jersey Water Resources: Shellfish Condemned Area Charts - 1978
Creators: name: No Name Supplied
Publisher: name: New Jersey Department of Environmental Protection (NJDEP)
Year: 1978

description: This chart, part of a series published annually, is a graphic representation of the classification regulations which delineate shellfish growing waters in New Jersey.  Other charts in this series were published as Approved Area Charts: Shellfish Growing Water Classification, Shellfish Growing Water Classification Charts and Condemned Area Chart.  These classifications result from surveys conducted by the New Jersey Department of Environmental Protection's (NJDEP) Bureau of Marine Water Monitoring, in accordance with the Food and Drug Administration as well as the National Shellfish Sanitation Program guidelines and regulations.  Waters are characterized in one of four ways: approved, seasonal, special restricted and prohibited.  Additional information contained in each year's chart package includes a summary of the changes in water classifications, harvest regulations, as well as other general information that is important for anyone interested in harvesting shellfish in New Jersey.
Cheilopogon exsiliens
Creators: name: Golani, Daniel
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Beloniformes
Exocoetidae
Cheilopogon
Cheilopogon exsiliens

description: Cheilopogon exsiliens (Linnaeus, 1771)
Cypsilurus exsiliens: Ben-Tuvia, 1953a; Ben-Tuvia, 1971a.
Cheilopogon exsiliens: Golani, 1996; Golani, 1997 (Heb.); Golani, 2005.
description: Published as part of Golani, Daniel, 2021, An updated Checklist of the Mediterranean fishes of Israel, with illustrations of recently recorded species and delineation of Lessepsian migrants, pp. 1-108 in Zootaxa 4956 (1) on page 32, DOI: 10.11646/zootaxa.4956.1.1, http://zenodo.org/record/4691195
Shellfish Growing Water Classification Charts - 1982
Creators: name: No Name Supplied
Publisher: name: New Jersey Department of Environmental Protection (NJDEP)
Year: 1982

description: This chart, part of a series published annually, is a graphic representation of the classification regulations which delineate shellfish growing waters in New Jersey.  Earlier charts in this series were published as Approved Area Charts: Shellfish Growing Water Classification, New Jersey Water Resources: Shellfish Condemned Area Charts and Condemned Area Chart.  These classifications result from surveys conducted by the New Jersey Department of Environmental Protection's (NJDEP) Bureau of Marine Water Monitoring, in accordance with the Food and Drug Administration as well as the National Shellfish Sanitation Program guidelines and regulations.  Waters are characterized in one of four ways: approved, seasonal, special restricted and prohibited.  Additional information contained in each year's chart package includes a summary of the changes in water classifications, harvest regulations, as well as other general information that is important for anyone interested in harvesting shellfish in New Jersey.
Acrocercops encentris Meyrick 1915, n. sp.
Creators: name: Prins, Jurate De
name: Brito, Rosângela
name: Moreira, Gilson Rudinei Pires
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Gracillariidae
Acrocercops
Acrocercops encentris

description: Acrocercops encentris Meyrick, 1915
" Acrocercops encentris, n. sp. "— Meyrick, E. 1915b. Transactions of the Entomological Society of London
(2): 227.
Type locality: British Guiana [Guyana], Bartica. Type specimens: 7 syntypes (♂ and ♀), BMNH. Distribution: Guyana (Meyrick 1915b: 227).
Larval hostplant(s): Unknown.
description: Published as part of Prins, Jurate De, Brito, Rosângela & Moreira, Gilson Rudinei Pires, 2016, An annotated taxonomic checklist of the Neotropical Gracillariidae (Lepidoptera) with links to the information on host plants and parasitoids, pp. 1-51 in Zootaxa 4158 (1) on page 9, DOI: 10.11646/zootaxa.4158.1.1, http://zenodo.org/record/255480
Shellfish Growing Water Classification Charts - 1983
Creators: name: No Name Supplied
Publisher: name: New Jersey Department of Environmental Protection (NJDEP)
Year: 1983

description: This chart, part of a series published annually, is a graphic representation of the classification regulations which delineate shellfish growing waters in New Jersey.  Earlier charts in this series were published as Approved Area Charts: Shellfish Growing Water Classification, New Jersey Water Resources: Shellfish Condemned Area Charts and Condemned Area Chart.  These classifications result from surveys conducted by the New Jersey Department of Environmental Protection's (NJDEP) Bureau of Marine Water Monitoring, in accordance with the Food and Drug Administration as well as the National Shellfish Sanitation Program guidelines and regulations.  Waters are characterized in one of four ways: approved, seasonal, special restricted and prohibited.  Additional information contained in each year's chart package includes a summary of the changes in water classifications, harvest regulations, as well as other general information that is important for anyone interested in harvesting shellfish in New Jersey.
Acrocercops fasciculata Meyrick 1915, n. sp.
Creators: name: Prins, Jurate De
name: Brito, Rosângela
name: Moreira, Gilson Rudinei Pires
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Gracillariidae
Acrocercops
Acrocercops fasciculata

description: Acrocercops fasciculata Meyrick, 1915
" Acrocercops fasciculata, n. sp. "— Meyrick, E. 1915b. Transactions of the Entomological Society of London
(2): 230–231.
Type locality: British Guiana [Guyana], Bartica. Type specimens: Holotype ♀, BMNH.
Distribution: Guyana (Meyrick 1915b: 231).
Larval hostplant(s): Unknown.
description: Published as part of Prins, Jurate De, Brito, Rosângela & Moreira, Gilson Rudinei Pires, 2016, An annotated taxonomic checklist of the Neotropical Gracillariidae (Lepidoptera) with links to the information on host plants and parasitoids, pp. 1-51 in Zootaxa 4158 (1) on page 9, DOI: 10.11646/zootaxa.4158.1.1, http://zenodo.org/record/255480
Shellfish Growing Water Classification Charts - 1984
Creators: name: No Name Supplied
Publisher: name: New Jersey Department of Environmental Protection (NJDEP)
Year: 1984

description: This chart, part of a series published annually, is a graphic representation of the classification regulations which delineate shellfish growing waters in New Jersey.  Earlier charts in this series were published as Approved Area Charts: Shellfish Growing Water Classification, New Jersey Water Resources: Shellfish Condemned Area Charts and Condemned Area Chart.  These classifications result from surveys conducted by the New Jersey Department of Environmental Protection's (NJDEP) Bureau of Marine Water Monitoring, in accordance with the Food and Drug Administration as well as the National Shellfish Sanitation Program guidelines and regulations.  Waters are characterized in one of four ways: approved, seasonal, special restricted and prohibited.  Additional information contained in each year's chart package includes a summary of the changes in water classifications, harvest regulations, as well as other general information that is important for anyone interested in harvesting shellfish in New Jersey.
Shellfish Growing Water Classification Charts - 1985
Creators: name: No Name Supplied
Publisher: name: New Jersey Department of Environmental Protection (NJDEP)
Year: 1985

description: This chart, part of a series published annually, is a graphic representation of the classification regulations which delineate shellfish growing waters in New Jersey.  Earlier charts in this series were published as Approved Area Charts: Shellfish Growing Water Classification, New Jersey Water Resources: Shellfish Condemned Area Charts and Condemned Area Chart.  These classifications result from surveys conducted by the New Jersey Department of Environmental Protection's (NJDEP) Bureau of Marine Water Monitoring, in accordance with the Food and Drug Administration as well as the National Shellfish Sanitation Program guidelines and regulations.  Waters are characterized in one of four ways: approved, seasonal, special restricted and prohibited.  Additional information contained in each year's chart package includes a summary of the changes in water classifications, harvest regulations, as well as other general information that is important for anyone interested in harvesting shellfish in New Jersey.
Shellfish Growing Water Classification Charts - 1986-1987
Creators: name: No Name Supplied
Publisher: name: New Jersey Department of Environmental Protection (NJDEP)
Year: 1986

description: This chart, part of a series published annually, is a graphic representation of the classification regulations which delineate shellfish growing waters in New Jersey.  Earlier charts in this series were published as Approved Area Charts: Shellfish Growing Water Classification, New Jersey Water Resources: Shellfish Condemned Area Charts and Condemned Area Chart.  These classifications result from surveys conducted by the New Jersey Department of Environmental Protection's (NJDEP) Bureau of Marine Water Monitoring, in accordance with the Food and Drug Administration as well as the National Shellfish Sanitation Program guidelines and regulations.  Waters are characterized in one of four ways: approved, seasonal, special restricted and prohibited.  Additional information contained in each year's chart package includes a summary of the changes in water classifications, harvest regulations, as well as other general information that is important for anyone interested in harvesting shellfish in New Jersey.
Leocratides Ehlers 1908
Creators: name: Salazar-Vallejo, Sergio I.
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Annelida
Polychaeta
Phyllodocida
Hesionidae
Leocratides

description: Leocratides Ehlers, 1908
Leocratides Ehlers, 1908: 63. Chamberlin 1919: 185; Fauvel 1953b: 107; Pettibone 1970: 229–230; Fauchald 1977: 76; Pleijel, 1998: 109–110, 160.
Type species. Leocratides filamentosus Ehlers, 1908 by monotypy.
Diagnosis. Hesioninae with two lateral antennae, and one median antenna on dorsal prostomial surface. Palps biarticulate, palpophores large, massive, palpostyles smaller, blunt. Eyes dark, black or brown, anterior ones larger than posterior ones, sometimes approaching each other in lateral view. Nuchal organs lobes round, projected posteriorly, parallel to divergent, posterior ciliated bands close to each other. Peristomium with dorsolateral tubercles, often lobate, and ventrolateral ones projected, with a ventral ridge usually with large round papillae. Pharynx with upper jaw double, T-shaped, lower jaw single, fang-shaped; neurochaetal blades bidentate, without guards. Parapodia all sesquiramous. Neurochaetae compound falcigers, blades bidentate, without guards.
Remarks. Leocratides Ehlers, 1908 resembles three other Hesioninae genera by having sesquiramous parapodia: Dalhousiella McIntosh, 1908, Elisesione Salazar-Vallejo, 2016, and Hesione Savigny in Lamarck, 1818. Leocratides differs from these genera because it has biarticulate palps (missing in Hesione, simple in Elisesione, biarticulate in Dalhousiella), median antenna (missing in Elisesione and Hesione, present in Dalhousiella), and especially because its pharynx is provided with jaws (missing in the three other genera), being double upper jaws, and single, fang-shaped lower ones.
Further, the nuchal organs lobes, as observed in a syntype of L. filamentosus Ehlers, 1908, the type species, are depressed, divergent, markedly separated middorsally (Fig. 44A, D). There are two other interesting differences in comparison to all other Hesioninae genera, and both might be related to the peristomium. First, there are two complex, dorsolateral tubercles resembling hands by having 3–4 thick digitate lobes as in L. filamentosus Ehlers, 1908, or 1–2 lobes as in L. ehlersi (Horst, 1921). Second, midventrally there is a continuous ridge with 8–10 large, thick, round papillae.
description: Published as part of Salazar-Vallejo, Sergio I., 2020, Revision of Leocrates Kinberg, 1866 and Leocratides Ehlers, 1908 (Annelida, Errantia, Hesionidae), pp. 1-114 in Zootaxa 4739 (1) on pages 73-74, DOI: 10.11646/zootaxa.4739.1.1, http://zenodo.org/record/3672547
Shellfish Growing Water Classification Charts - 1987-1988
Creators: name: No Name Supplied
Publisher: name: New Jersey Department of Environmental Protection (NJDEP)
Year: 1987

description: This chart, part of a series published annually, is a graphic representation of the classification regulations which delineate shellfish growing waters in New Jersey.  Earlier charts in this series were published as Approved Area Charts: Shellfish Growing Water Classification, New Jersey Water Resources: Shellfish Condemned Area Charts and Condemned Area Chart.  These classifications result from surveys conducted by the New Jersey Department of Environmental Protection's (NJDEP) Bureau of Marine Water Monitoring, in accordance with the Food and Drug Administration as well as the National Shellfish Sanitation Program guidelines and regulations.  Waters are characterized in one of four ways: approved, seasonal, special restricted and prohibited.  Additional information contained in each year's chart package includes a summary of the changes in water classifications, harvest regulations, as well as other general information that is important for anyone interested in harvesting shellfish in New Jersey.
Cheilopogon heterurus
Creators: name: Golani, Daniel
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Beloniformes
Exocoetidae
Cheilopogon
Cheilopogon heterurus

description: Cheilopogon heterurus (Rafinesque, 1810)
Cheilopogon heterurus: Golani, 1996; Golani, 1997 (Heb.); Golani, 2005;.
description: Published as part of Golani, Daniel, 2021, An updated Checklist of the Mediterranean fishes of Israel, with illustrations of recently recorded species and delineation of Lessepsian migrants, pp. 1-108 in Zootaxa 4956 (1) on page 32, DOI: 10.11646/zootaxa.4956.1.1, http://zenodo.org/record/4691195
Mechanisms underlying the failure of checkpoint activation in the C. elegans male germ line
Creators: name: University Of California Office Of The President
Publisher: name: University of California Office of the President
publisherIdentifier: https://ror.org/00dmfq477
publisherIdentifierScheme: ROR
Year: 2024

description: Cell cycle deregulation and defective genome-integrity checkpoints are among the hallmarks of cancer. Meiosis is a model process in which to study cell cycle checkpoint functions as programmed double strand break (DSB) formation and repair for meiotic recombination, and chromosome synapsis are under conserved checkpoint surveillance control. Genome integrity is coupled to these processes because failure to repair breaks or correctly synapse homologous chromosomes can lead to high incidence of aneuploidy due to chromosome missegregation. Recently, studies using the nematode, Caenorhabditis elegans, have elucidated differences in checkpoint control during gametogenesis in the two sexes. Apparently, the male germ line of C. elegans lacks the normal surveillance mechanisms that ensure genome integrity. We propose to take advantage of this genetic system to uncover the molecular mechanisms that allow males to bypass the normal checkpoint machinery in the germ line. The asynapsed X-chromosome in males does not activate the synapsis checkpoint. Further, we have shown that chromosome asynapsis of the autosomes does not activate the synapsis checkpoint in the male germ line. Here we propose to determine if an independent DNA damage checkpoint is also inactive during genotoxic stress in the male germ line by monitoring apoptosis upon DNA damage. We will establish if DSBs are induced on the single male X chromosome by assaying RAD-51 foci staining in whole-mount gonads. Interestingly, since no X homolog is present as a repair substrate, a mechanism may exist to channel repair of DSBs to sister chromatids. We will test the hypothesis that X-chromosome-specific chromatin either represses formation of DSBs or alternatively influences homolog versus sister chromatid use by examining the loading of meiosis-specific components on the single male X. We will also examine the consequence of perturbing chromatin structure by down regulating genes that influence chromatin modifications through RNAi. Finally, we propose a mutant screen to identify genes involved in circumventing the normal checkpoint machinery in the male germ line. Given the extensive degree of evolutionary conservation, it is likely that an understanding of these pathways in the germ line of C. elegans will provide general insights into the role of orthologous pathways in humans and how these pathways contribute to the etiology of cancer.
Halobacterium_salinarum_AD88.fasta
Creators: name: Rodriguez-Cruz, Ulises Erick
Publisher: name: figshare
Year: 2024
Subjects: classificationCode: 310403
subject: Biological adaptation

description: Using an approach that includes culture-dependent and culture-independent techniques, we describe the genomic characteristics of the Halobacterium salinarum AD88 strain. Striking differences compared to other Halobacteria were uncovered, as its genomic architecture featured smaller and novel plasmids, divergence within the H. salinarum clade and a single genome duplication. Nevertheless, the basal position of H. salinarum AD88 not only accentuates its potential as a genetically distinctive strain but also raises questions about the evolutionary forces that shaped its divergence, prompting to a reevaluation of our understanding of genome dynamics in halophilic archaea. While phylogenomic methods provide a useful framework for distinguishing species-level differences in archaea, they fail to capture the full complexity of genomic variations. Comparative genomic studies across diverse archaeal taxa have revealed patterns of conservation and divergence in core genes, genes of unknown function, and mobile genetic elements, shaped by both phylogenetic and ecological pressures. Investigating the role of conserved and accessory genes in facilitating ecological specialization and maintaining population structures across evolutionary gradients could illuminate the mechanisms regulating archaeal speciation, offering new insights into how genomic diversity and functional adaptations arise and are maintained in extreme environments. Further exploration of these dynamics through integrative approaches, combining genomics, transcriptomics, and environmental data would advance our ability to refine archaeal taxonomy and deepen our understanding of their evolutionary trajectories.
Acrocercops gemmans Walsingham 1914, sp. n.
Creators: name: Prins, Jurate De
name: Brito, Rosângela
name: Moreira, Gilson Rudinei Pires
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Gracillariidae
Acrocercops
Acrocercops gemmans

description: Acrocercops gemmans Walsingham, 1914
" Acrocercops gemmans, sp. n. "— Walsingham, Lord (Thomas de Grey). 1914. Biologia Centrali- Americana, Lepidoptera-Heterocera 4(1909–1915): 339–340. Type locality: Mexico, Guerrero, Amula, 6000 ft., viii.1918, leg. H.H. Smith. Type specimens: Holotype ♂, coll. Walsingham nr. 66751, BMNH; 8 paratypes nrs. 66752, 66754, 66755,
66757, 66758 in BMNH, nrs. 66753, 66756, 66759 in USNM. Distribution: Mexico (Walsingham 1914: 340).
Larval hostplant(s): Unknown.
description: Published as part of Prins, Jurate De, Brito, Rosângela & Moreira, Gilson Rudinei Pires, 2016, An annotated taxonomic checklist of the Neotropical Gracillariidae (Lepidoptera) with links to the information on host plants and parasitoids, pp. 1-51 in Zootaxa 4158 (1) on page 9, DOI: 10.11646/zootaxa.4158.1.1, http://zenodo.org/record/255480
Shellfish Growing Water Classification Charts - 1988-1989
Creators: name: No Name Supplied
Publisher: name: New Jersey Department of Environmental Protection (NJDEP)
Year: 1988

description: This chart, part of a series published annually, is a graphic representation of the classification regulations which delineate shellfish growing waters in New Jersey.  Earlier charts in this series were published as Approved Area Charts: Shellfish Growing Water Classification, New Jersey Water Resources: Shellfish Condemned Area Charts and Condemned Area Chart.  These classifications result from surveys conducted by the New Jersey Department of Environmental Protection's (NJDEP) Bureau of Marine Water Monitoring, in accordance with the Food and Drug Administration as well as the National Shellfish Sanitation Program guidelines and regulations.  Waters are characterized in one of four ways: approved, seasonal, special restricted and prohibited.  Additional information contained in each year's chart package includes a summary of the changes in water classifications, harvest regulations, as well as other general information that is important for anyone interested in harvesting shellfish in New Jersey.
Hirundichthys rondeletii
Creators: name: Golani, Daniel
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Beloniformes
Exocoetidae
Hirundichthys
Hirundichthys rondeletii

description: Hirundichthys rondeletii (Valenciennes, 1846)
Cypsilurus rondelettii: Ben-Tuvia, 1953a; Ben-Tuvia, 1971a.
Hirundichthys rondeletii: Golani, 1996; Golani, 2005.
* Parexocoetus mento (Valenciennes, 1846)
Parexocoetus brachypterus: Dor, 1959.
Parexocoetus mento: Ben-Tuvia, 1966; Ben-Tuvia, 1971a; Golani, 1996; Golani, 2002a; Golani, et al., 2002; Golani, 2005; Levitt, 2012; Karahan et al., 2017 (Gen.).
Paraexocoetus mento: Ben-Tuvia, 1978; Ben-Tuvia, 1985; Golani & Ben-Tuvia, 1996; Golani, 1998a; Golani, 1998b.
ORDER: BERYCIFORMES
TRACHICHTHYIDAE
description: Published as part of Golani, Daniel, 2021, An updated Checklist of the Mediterranean fishes of Israel, with illustrations of recently recorded species and delineation of Lessepsian migrants, pp. 1-108 in Zootaxa 4956 (1) on pages 32-33, DOI: 10.11646/zootaxa.4956.1.1, http://zenodo.org/record/4691195