cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 9 of Remnants of horizontal transfers of Wolbachia genes in a Wolbachia-free woodwasp
Creators: name: Queffelec, Joséphine
name: Postma, Alisa
name: Allison, Jeremy D.
name: Slippers, Bernard
Publisher: name: figshare
Year: 2022
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics

description: Additional file 9: Figure S9. Maximum likelihood tree. It was constructed with the protein sequence of ORF11 compared to similar protein sequences of 10 Wolbachia strains. The branch indicated in red represents the position of ORF11 among other Wolbachia protein sequences. All Wolbachia strains are named after their hosts as follows: wAlbB, Aedes albopictus; wAus, Plutella australiana; wBlon, Brontispa longissima; wCobs, Cardiocondyla obscurior; wDi, Diaphorina citri; wMau, Drosophila mauritiana; wNo, Drosophila simulans; wPip, Culex quinquefasciatus; wPnig, Pentalonia nigronervosa; wStri, Laodelphax striatellus.
Additional file 8 of Remnants of horizontal transfers of Wolbachia genes in a Wolbachia-free woodwasp
Creators: name: Queffelec, Joséphine
name: Postma, Alisa
name: Allison, Jeremy D.
name: Slippers, Bernard
Publisher: name: figshare
Year: 2022
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics

description: Additional file 8: Figure S8. Maximum likelihood tree. It was constructed with the protein sequence of ORF10 compared to similar protein sequences of 21 Wolbachia strains and one protein sequence from Diplorickettsia massiliensis (Gammaproteobacteria: Coxiellaceae). The branch indicated in red represents the position of ORF10 among other Wolbachia protein sequences. All Wolbachia strains are named after their hosts as follows: wAlbB, Aedes albopictus ; wAna, Drosophila ananassae; wAus, Plutella australiana ; wCauA, Carposina sasakii; wCfeJ, Ctenocephalides felis; wCle, Cimex lectularius; wCobs, Cardiocondyla obscurior; wCon, Cylisticus convexus; wDi, Diaphorina citri; wFcan, Folsomia candida; wMau, Drosophila mauritiana; wMel, Drosophila melanogaster; wNfe, Nomada ferruginata; wNo, Drosophila simulans; wOb, Operophtera brumata; wPip, Culex quinquefasciatus; wPnig, Pentalonia nigronervosa; wSan, Drosophila santomea; wStri, Laodelphax striatellus; wVulC, Armadillidium vulgare.
title: ADCO, Cartulaire général de Cîteaux, dit de Jean de Cirey, (XVe siècle), tome IV, Cart. 188 (11 H 73), f. 0101r
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: cartulaire
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: Cartulaire général de Cîteaux, dit de Jean de Cirey, (XVe siècle), tome IV, Archives départementales de la Côte-d'Or, Cart. 188 (11 H 73), f. 0101r, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire général de Cîteaux, dit de Jean de Cirey, (XVe siècle), tome IV, Archives départementales de la Côte-d'Or, Cart. 188 (11 H 73), f. 0101r, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
Quantum phases of disordered three-dimensional Majorana-Weyl fermions
Creators: name: Wilson, Justin H.
name: Pixley, J. H.
name: Goswami, Pallab
name: Sarma, S. Das
Publisher: name: arXiv
Year: 2016
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: The gapless Bogoliubov-de Gennes (BdG) quasiparticles of a clean three dimensional spinless $p_x+ip_y$ superconductor provide an intriguing example of a thermal Hall semimetal (ThSM) phase of Majorana-Weyl fermions in class D of the Altland-Zirnbauer symmetry classification; such a phase can support a large anomalous thermal Hall conductivity and protected surface Majorana-Fermi arcs at zero energy. We study the effect of quenched disorder on such a topological phase with both numerical and analytical methods. Using the kernel polynomial method, we compute the average and typical density of states for the BdG quasiparticles; based on this, we construct the disordered phase diagram. We show for infinitesimal disorder, the ThSM is converted into a diffusive thermal Hall metal (ThDM) due to rare statistical fluctuations. Consequently, the phase diagram of the disordered model only consists of ThDM and thermal insulating phases. Nonetheless, there is a cross-over at finite energies from a ThSM regime to a ThDM regime, and we establish the scaling properties of the avoided quantum critical point which marks this cross-over. Additionally, we show the existence of two types of thermal insulators: (i) a trivial thermal band insulator (ThBI) [or BEC phase] supporting only exponentially localized Lifshitz states (at low energy), and (ii) a thermal Anderson insulator (AI) at large disorder strengths. We determine the nature of the two distinct localization transitions between these two types of insulators and ThDM.We also discuss the experimental relevance of our results for three dimensional, time reversal symmetry breaking, triplet superconducting states.
description: 24 pages, 24 figures
Additional file 7 of Skeletal muscle loss during neoadjuvant chemotherapy predicts poor prognosis in patients with breast cancer
Creators: name: Amitani, Masatsugu
name: Oba, Takaaki
name: Kiyosawa, Nami
name: Morikawa, Hiroki
name: Chino, Tatsunori
name: Soma, Ai
name: Shimizu, Tadafumi
name: Ohno, Koichi
name: Ono, Mayu
name: Ito, Tokiko
name: Kanai, Toshiharu
name: Maeno, Kazuma
name: Ito, Ken-ichi
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 7.
Additional file 7 of Remnants of horizontal transfers of Wolbachia genes in a Wolbachia-free woodwasp
Creators: name: Queffelec, Joséphine
name: Postma, Alisa
name: Allison, Jeremy D.
name: Slippers, Bernard
Publisher: name: figshare
Year: 2022
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics

description: Additional file 7: Figure S7. Maximum likelihood tree. It was constructed with the protein sequence of ORF9 compared to similar protein sequences of 20 Wolbachia strains and one protein sequence from Moorea producens (Cyanobacteria: Oscillatoriaceae). The branch indicated in red represents the position of ORF9 among other Wolbachia protein sequences. All Wolbachia strains are named after their hosts as follows: wAna, Drosophila ananassae; wAu, Drosophila simulans; wBt, Bemisia tabaci; wCfeT, Ctenocephalides felis; wCon, Cylisticus convexus; wDac, Dactylopius coccus; wDi, Diaphorina citri; wInc, Drosophila incompta; wKgib, Kradibia gibbosae; wMeg, Chrysomya megacephala; wMel, Drosophila melanogaster; wOb, Operophtera brumata; wOne, Nasonia oneida; wPip, Culex quinquefasciatus; wPol, Atemnus politus; wSan, Drosophila santomea; wStri, Laodelphax striatellus; wTei, Drosophila teissieri; wVulC, Armadillidium vulgare; wYak, Drosophila yakuba.
Additional file 6 of Skeletal muscle loss during neoadjuvant chemotherapy predicts poor prognosis in patients with breast cancer
Creators: name: Amitani, Masatsugu
name: Oba, Takaaki
name: Kiyosawa, Nami
name: Morikawa, Hiroki
name: Chino, Tatsunori
name: Soma, Ai
name: Shimizu, Tadafumi
name: Ohno, Koichi
name: Ono, Mayu
name: Ito, Tokiko
name: Kanai, Toshiharu
name: Maeno, Kazuma
name: Ito, Ken-ichi
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 6.
Additional file 6 of Remnants of horizontal transfers of Wolbachia genes in a Wolbachia-free woodwasp
Creators: name: Queffelec, Joséphine
name: Postma, Alisa
name: Allison, Jeremy D.
name: Slippers, Bernard
Publisher: name: figshare
Year: 2022
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics

description: Additional file 6: Figure S6. Maximum likelihood tree. It was constructed with the protein sequence of ORF7 compared to similar protein sequences of 22 Wolbachia strains and one protein sequence from Holospora undulata (Alphaproteobacteria: Holosporaceae). The branch indicated in red represents the position of ORF7 among other Wolbachia protein sequences. All Wolbachia strains are named after their hosts as follows: wBt, Bemisia tabaci; wCauA, Carposina sasakii; wCfeT, Ctenocephalides felis; wCobs, Cardiocondyla obscurior; wCon, Cylisticus convexus; wDac, Dactylopius coccus; wDi, Diaphorina citri; wFcan, Folsomia candida; wGmo, Glossina morsitans; wInc, Drosophila incompta; wKgib, Kradibia gibbosae; wLug, Nilaparvata lugens; wMau, Drosophila mauritiana; wMeg, Chrysomya megacephala; wNleu, Nomada leucophthalma; wNo, Drosophila simulans; wNpa, Nomada panzeri; wPip, Culex quinquefasciatus; wPnig, Pentalonia nigronervosa; wStri, Laodelphax striatellus; wVulC, Armadillidium vulgare.
Additional file 5 of Skeletal muscle loss during neoadjuvant chemotherapy predicts poor prognosis in patients with breast cancer
Creators: name: Amitani, Masatsugu
name: Oba, Takaaki
name: Kiyosawa, Nami
name: Morikawa, Hiroki
name: Chino, Tatsunori
name: Soma, Ai
name: Shimizu, Tadafumi
name: Ohno, Koichi
name: Ono, Mayu
name: Ito, Tokiko
name: Kanai, Toshiharu
name: Maeno, Kazuma
name: Ito, Ken-ichi
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 5.
MOESM3 of Mapping the evidence on health equity considerations in economic evaluations of health interventions: a scoping review protocol
Creators: name: Besar Saâ€™aid, Hafizah
name: Mathew, Sharon
name: Richardson, Marina
name: Bielecki, Joanna
name: Sander, Beate
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Environmental Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Information Systems not elsewhere classified
subject: Cancer
subject: Computational Biology

description: Additional file 3. Search strategy for grey literature. (docx 16kb)
Additional file 3: Figure S2. of Selective proliferative response of microglia to alternative polarization signals
Creators: name: Pepe, Giovanna
name: Maglie, Marcella De
name: Minoli, Lucia
name: Villa, Alessandro
name: Maggi, Adriana
name: Vegeto, Elisabetta
Publisher: name: figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Molecular Biology
subject: Pharmacology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Marine Biology
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Plant Biology

description: In vitro proliferative and polarization responses of macrophages to IL-4, CSF-1 and E2. A) The expression of proliferation (Ki67, Cdk1 and Ccnb2) and M2 polarization (Arg1, Fizz1, Mrc1) genes was analyzed in primary cultures of peritoneal macrophages following treatment with 20 ng/ml IL-4 (black bars) or 20 ng/ml CSF-1 (gray bars). B) The expression of proliferation (Ki67, Cdk1 and Ccnb2) and M2 polarization (Arg1, Vegfα) genes was analyzed in primary cultures of peritoneal macrophages following vehicle (0.01% EtOH) or 10−5 M E2 treatments. Bars represent the mean ± SEM of 3 independent experiments, each performed in triplicate Data sets for each gene were calculated using the 2-ddCt method with respect to the mean value of the vehicle group. Bars represent mean values ± SEM (n = 3). Student’s unpaired t-test, *p
Herstellung dünner Folien aus Lithium-Lanthan-Titanat zur Anwendung als Festkörperelektrolyt
Creators: name: Schröckert, Felix
Publisher: name: KIT Scientific Publishing
Year: 2022
Subjects: Keramik
Foliengießen
Festkörperelektrolyt
Lithium-Ionen-Batterie
Lithium-Lanthan-Titanat
ceramics
tape casting
solid electrolyte
lithium ion battery
lithium lanthanum titanate

description: In dieser Arbeit wird die Herstellung einer dünnen Schicht aus Lithium-Lanthan-Titanat durch Foliengießen zur Anwendung in einer Lithium-Ionen-Festkörperbatterie beschrieben. Der Einfluss der Zusammensetzung des Schlickers auf seine Fließeigenschaften wird untersucht. Die hergestellten Schichten werden sowohl einzeln als auch in Verbindung mit einer Composite-Anode aus Lithium-Titanat charakterisiert Ihre Eignung für die Anwendung in einer Festkörperbatterie wird demonstriert.
Stagnant Shells in the Vicinity of the Dusty Wolf-Rayet-OB Binary WR 112
Creators: name: Lau, R. M.
name: Hankins, M. J.
name: Schödel, R.
name: Sanchez-Bermudez, J.
name: Moffat, A. F. J.
name: Ressler, M. E.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We present high spatial resolution mid-infrared images of the nebula around the late-type carbon-rich Wolf-Rayet (WC)-OB binary system WR~112 taken by the recently upgraded VLT spectrometer and imager for the mid-infrared (VISIR) with the PAH1, NeII\_2, and Q3 filters. The observations reveal a morphology resembling a series of arc-like filaments and broken shells. Dust temperatures and masses are derived for each of the identified filamentary structures, which exhibit temperatures ranging from $179_{-6}^{+8}$ K at the exterior W2 filament to $355_{-25}^{+37}$ K in the central 3". The total dust mass summed over the features is $2.6\pm0.4\times10^{-5}$ $\mathrm{M}_\odot$. A multi-epoch analysis of mid-IR photometry of WR~112 over the past $\sim20$ yr reveals no significant variability in the observed dust temperature and mass. The morphology of the mid-IR dust emission from WR~112 also exhibits no significant expansion from imaging data taken in 2001, 2007, and 2016, which disputes the current interpretation of the nebula as a high expansion velocity ($\sim1200$ km s$^{-1}$) "pinwheel"-shaped outflow driven by the central WC-OB colliding-wind binary. An upper limit of $\lesssim120$ km s$^{-1}$ is derived for the expansion velocity assuming a distance of $4.15$ kpc. The upper limit on the average total mass-loss rate from the central 3" of WR~112 is estimated to be $\lesssim8\times10^{-6}$ $\mathrm{M}_\odot$ yr$^{-1}$. We leave its true nature as an open question, but propose that the WR~112 nebula may have formed in the outflow during a previous red or yellow supergiant phase of the central Wolf-Rayet star.
description: 7 pages, 3 figures, 2 tables, Accepted for publication in ApJL
Additional file 4 of Skeletal muscle loss during neoadjuvant chemotherapy predicts poor prognosis in patients with breast cancer
Creators: name: Amitani, Masatsugu
name: Oba, Takaaki
name: Kiyosawa, Nami
name: Morikawa, Hiroki
name: Chino, Tatsunori
name: Soma, Ai
name: Shimizu, Tadafumi
name: Ohno, Koichi
name: Ono, Mayu
name: Ito, Tokiko
name: Kanai, Toshiharu
name: Maeno, Kazuma
name: Ito, Ken-ichi
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 4.
Choice Bracketing revisited: Replication and extensions Registered Report of seven experiments reviewed in Read et al. (1999)
Creators: name: Feldman, Gilad
name: Lam, Wong Chun
Publisher: name: OSF Registries
Year: 2023
Subjects: subject: Social and Behavioral Sciences
subject: choice
subject: decision making
subject: registered report
subject: replication

description: Please see "Stage 1" for preprint, Qualtircs survey, and simulated data and code
Additional file 5 of Remnants of horizontal transfers of Wolbachia genes in a Wolbachia-free woodwasp
Creators: name: Queffelec, Joséphine
name: Postma, Alisa
name: Allison, Jeremy D.
name: Slippers, Bernard
Publisher: name: figshare
Year: 2022
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics

description: Additional file 5: Figure S5. Maximum likelihood tree. It was constructed with the protein sequence of ORF6 compared to similar protein sequences of 23 Wolbachia strains and one protein sequence from Holospora undulata (Alphaproteobacteria: Holosporaceae) (out group). The branch indicated in red represents the position of ORF6 among other Wolbachia protein sequences. All Wolbachia strains are named after their hosts as follows: wAna, Drosophila ananassae; wBt, Bemisia tabaci; wCauA, Carposina sasakii; wCobs, Cardiocondyla obscurior; wCon, Cylisticus convexus; wDac, Dactylopius coccus; wDi, Diaphorina citri; wFcan, Folsomia candida; wKgib, Kradibia gibbosae; wLug, Nilaparvata lugens; wMau, Drosophila mauritiana; wMeg, Chrysomya megacephala; wMelPop, Drosophila melanogaster; wNfe, Nomada ferruginata; wNo, Drosophila simulans; wOne, Nasonia oneida; wPip, Culex quinquefasciatus; wPip_Mol, Culex molestus; wPnig, Pentalonia nigronervosa; wStri, Laodelphax striatellus; wTei, Drosophila teissieri; wVulC, Armadillidium vulgare; wYak, Drosophila yakuba.
Additional file 3 of Skeletal muscle loss during neoadjuvant chemotherapy predicts poor prognosis in patients with breast cancer
Creators: name: Amitani, Masatsugu
name: Oba, Takaaki
name: Kiyosawa, Nami
name: Morikawa, Hiroki
name: Chino, Tatsunori
name: Soma, Ai
name: Shimizu, Tadafumi
name: Ohno, Koichi
name: Ono, Mayu
name: Ito, Tokiko
name: Kanai, Toshiharu
name: Maeno, Kazuma
name: Ito, Ken-ichi
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 3.
Additional file 4 of Remnants of horizontal transfers of Wolbachia genes in a Wolbachia-free woodwasp
Creators: name: Queffelec, Joséphine
name: Postma, Alisa
name: Allison, Jeremy D.
name: Slippers, Bernard
Publisher: name: figshare
Year: 2022
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics

description: Additional file 4: Figure S4. Maximum likelihood tree. It was constructed with the protein sequence of ORF4 compared to similar protein sequences of seven Wolbachia strains and one protein sequence from Legionella pneumophila (Gammaproteobacteria: Legionellaceae) (out group). The branch indicated in red represents the position of ORF4 among other Wolbachia protein sequences. All Wolbachia strains are named after their hosts as follows: wAu, Drosophila simulans; wDac, Dactylopius coccus; wHa, Drosophila simulans; wMelPop, Drosophila melanogaster; wOne, Nasonia oneida; wUni, Muscidifurax uniraptor; wVulC, Armadillidium vulgare.
Hydrogenation of claddings in the new developed HOKI oven and performance of the long-term bundle test under dry storage conditions in the framework of the SPIZWURZ project
Creators: name: Stuckert, Juri
name: Rössger, Conrado
name: Moch, Jürgen
name: Grosse, Mirco
name: Weick, Sarah
Publisher: name: Karlsruher Institut für Technologie (KIT)
Year: 2023
Subjects: dry storage of spent nuclear fuel
reorientation of zirconium hydrides

description: During the dry storage of spent nuclear fuel, the initially dissolved hydrogen precipitates as hydrides in the metallic matrix. The orientation of hydrides influences the crack propagation and depends mainly on the hoop stress. In the frame of the SPIZWURZ project, the reorientation of zirconium hydrides in cladding tubes is being investigated under conditions similar to dry storage. For the long-term SPIZWURZ bundle experiment, 21 zirconium alloy tubes were charged with hydrogen to 100 and 300 wppm in the special developed HOKI tube oven as homogeneously as possible along a length of 1.3 m. The developed process allows a stepwise and controlled hydrogen absorption through the specially treated inner surface of claddings placed in the oven heated to 450 °C. The hydrogenation was carried out by successively supplying fixed masses of hydrogen, initially increasing the pressure in the tube sample from the achieved vacuum level to about 0.5 bar. Because of absorption, this pressure dropped to a predetermined vacuum level within a few minutes. During hydrogenation and subsequent heat treatment processes, the outer surface of the tube was exposed to a flow of oxygen to create an outer oxide layer more than 1 μm thick, which served as a barrier to hydrogen accumulating in the tube wall. After the hydrogen loading of the samples, the axial distribution of hydrogen was determined by laser scanning profilometry. This method makes it possible to use the correlation between the swelling of the rod diameter and the hydrogen concentration. This correlation was obtained by hot extraction of hydrogen from pre-hydrogenated reference samples. A long-term bundle test with hydrogenated and pressurized cladding tubes began on 12.05.2023 and will last until mid-January 2024. The peak cladding temperature decreased in steps of about 15 K from 400 to 200 °C currently (the average cooling rate is about 0.9 K/day).
BPS submodels of the Skyrme model
Creators: name: Adam, C.
name: Sanchez-Guillen, J.
name: Wereszczynski, A.
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We show that the standard Skyrme model without pion mass term can be expressed as a sum of two BPS submodels, i.e., of two models whose static field equations, independently, can be reduced to first order equations. Further, these first order (BPS) equations have nontrivial solutions, at least locally. These two submodels, however, cannot have common solutions. Our findings also shed some light on the rational map approximation. Finally, we consider certain generalisations of the BPS submodels.
description: Latex, 12 pages
Additional file 2 of Skeletal muscle loss during neoadjuvant chemotherapy predicts poor prognosis in patients with breast cancer
Creators: name: Amitani, Masatsugu
name: Oba, Takaaki
name: Kiyosawa, Nami
name: Morikawa, Hiroki
name: Chino, Tatsunori
name: Soma, Ai
name: Shimizu, Tadafumi
name: Ohno, Koichi
name: Ono, Mayu
name: Ito, Tokiko
name: Kanai, Toshiharu
name: Maeno, Kazuma
name: Ito, Ken-ichi
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 2.
Additional file 3 of Remnants of horizontal transfers of Wolbachia genes in a Wolbachia-free woodwasp
Creators: name: Queffelec, Joséphine
name: Postma, Alisa
name: Allison, Jeremy D.
name: Slippers, Bernard
Publisher: name: figshare
Year: 2022
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics

description: Additional file 3: Figure S3. Maximum likelihood tree. It was constructed with the protein sequence of ORF3 compared to similar protein sequences of two Wolbachia strains and one protein sequence from Mastigocladopsis repens (Cyanobacteria: Symphyonemataceae) (out group). The branch indicated in red represents the position of ORF3 among other protein sequences. The two Wolbachia strains are named after their hosts as follows: wFcan, Folsomia candida; wVulC, Armadillidium vulgare.
Additional file 1: of Coping with Unusual ExperienceS for 12â 18 year olds (CUES+): a transdiagnostic randomised controlled trial of the effectiveness of cognitive therapy in reducing distress associated with unusual experiences in adolescent mental health services: study protocol for a randomised controlled trial
Creators: name: Jolley, Suzanne
name: Browning, Sophie
name: Corrigall, Richard
name: Laurens, Kristin
name: Hirsch, Colette
name: Bracegirdle, Karen
name: Gin, Kimberley
name: Muccio, Francesca
name: Stewart, Catherine
name: Partha Banerjea
name: Kuipers, Elizabeth
name: Garety, Philippa
name: Byrne, Majella
name: Onwumere, Juliana
name: Achilla, Evanthia
name: McCrone, Paul
name: Emsley, Richard
Publisher: name: figshare
Year: 2017
Subjects: subject: Medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Coping with unusual experiences for 12â 18 year olds (CUES+): SPIRIT Checklist. (DOC 122 kb)
Neutrino mass matrices with one texture equality and one vanishing neutrino mass
Creators: name: Han, Jinzhong
name: Wang, Ruihong
name: Wang, Weijian
name: Wei, Xing-Ning
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: In the light of latest data of neutrino oscillation experiments, we carry out a systematic investigation on the texture structures of Majorana neutrino mass matrix $M_ν$, which contain one vanishing neutrino mass and an equality between two matrix elements. Among 15 logically possible patterns, it is found that for norm order ($m_{3}>m_{2}>m_{1}=0$) of neutrino masses only five of them are compatible with recent experimental data at the $3σ$ level, while for inverted order ($m_{2}>m_{1}>m_{3}=0$) ten patterns is phenomenologically allowed. In the numerical analysis, we perform a scan over the parameter space of all viable patterns to get a large sample of scattering points. We present the implications of each allowed pattern for three mixing angles $(θ_{12},θ_{2},θ_{3})$, leptonic CP violation and neutrinoless double-beta decay, predicting strong correlations between oscillation parameters. The theoretical realization of a concrete example is discussed in the framework of Froggatt-Nielsen mechanism.
Additional file 1 of Skeletal muscle loss during neoadjuvant chemotherapy predicts poor prognosis in patients with breast cancer
Creators: name: Amitani, Masatsugu
name: Oba, Takaaki
name: Kiyosawa, Nami
name: Morikawa, Hiroki
name: Chino, Tatsunori
name: Soma, Ai
name: Shimizu, Tadafumi
name: Ohno, Koichi
name: Ono, Mayu
name: Ito, Tokiko
name: Kanai, Toshiharu
name: Maeno, Kazuma
name: Ito, Ken-ichi
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 1.
Soft-proton exchange on Magnesium-oxide-doped substrates a route toward efficient and power-resistant nonlinear converters
Creators: name: Lunghi, T.
name: Doutre, F.
name: Legoff, G.
name: Ayenew, G.
name: Tronche, H.
name: Tanzilli, S.
name: Baldi, P.
name: De Micheli, M.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Despite its attractive features, Congruent-melted Lithium Niobate (CLN) suffers from Photo-Refractive Damage (PRD). This light-induced refractive-index change hampers the use of CLN when high-power densities are in play, a typical regime in integrated optics. The resistance to PRD can be largely improved by doping the lithium-niobate substrates with magnesium oxide. However, the fabrication of waveguides on MgO-doped substrates is not as effective as for CLN: either the resistance to PRD is strongly reduced by the waveguide fabrication process (as it happens in Ti-indiffused waveguides) or the nonlinear conversion efficiency is lowered (as it occurs in annealed-proton exchange). Here we fabricate, for the first time, waveguides starting from MgO-doped substrates using the Soft-Proton Exchange (SPE) technique and we show that this third way represents a promising alternative. We demonstrate that SPE allows to produce refractive-index profiles almost identical to those produced on CLN without reducing the nonlinearity in the substrate. We also prove that the SPE does not affect substantially the resistance to PRD. Since the fabrication recipe is identical between CLN and MgO-doped substrates, we believe that SPE might outperform standard techniques to fabricate robust and efficient waveguides for high-intensity-beam confinement.
Additional file 1: of Effects of treatment changes on asthma phenotype prevalence and airway neutrophil function
Creators: name: Brooks, Collin
name: Dalen, Christine Van
name: Harding, Elizabeth
name: Hermans, Ian
name: Douwes, Jeroen
Publisher: name: figshare
Year: 2017
Subjects: subject: Space Science
subject: Medicine
subject: Molecular Biology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Methods S1. Details of the safety protocol for the sub-optimisation of treatment, skin-prick testing, sputum induction and processing, and sputum flow cytometry. Table S1. Number of participants in the change in treatment study using ICS and/or LABA. (DOCX 30Â kb)
Additional file 2 of Remnants of horizontal transfers of Wolbachia genes in a Wolbachia-free woodwasp
Creators: name: Queffelec, Joséphine
name: Postma, Alisa
name: Allison, Jeremy D.
name: Slippers, Bernard
Publisher: name: figshare
Year: 2022
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics

description: Additional file 2: Figure S2. Maximum likelihood tree. It was constructed with the protein sequence of ORF2 compared to similar protein sequences of 12 Wolbachia strains and one protein sequence from Herpetosiphon llansteffanense (Terrabacteria: Herpetosiphonales) (out group). The branch indicated in red represents the position of ORF2 among other Wolbachia protein sequences. All Wolbachia strains are named after their hosts as follows: wAna, Drosophila ananassae; wCauA, Carposina sasakii; wCobs, Cardiocondyla obscurior; wCon, Cylisticus convexus; wHa, Drosophila simulans; wKgib, Kradibia gibbosae; wLug, Nilaparvata lugens; wMelPop, Drosophila melanogaster; wPnig, Pentalonia nigronervosa; wUni, Muscidifurax uniraptor; wTpre, Trichogramma pretiosum; wVulC, Armadillidium vulgare.
اولویت بندی عوامل تأثیرگذار مهندسی مجدد فرایند کسب و کار بر چابكی سازمان (مورد مطالعه: شرکت برق منطقه ای آذربایجان)
Creators: name: شهرام بگ زاده
name: یعسوب نجفیان
Publisher: name: figshare
Year: 2020
Subjects: subject: 180110 Criminal Law and Procedure
subject: FOS: Law

description: هدف از پژوهش حاضر اولویت بندی عوامل تأثیرگذار مهندسی مجدد فرایند کسب و کار بر چابكی سازمان انجام شد که جامعه آماری این پژوهش شامل تمام کارکنان شرکت برق منطقه ای آذربایجان بود که تعداد آنها بر اساس آمار 98، 2300 نفر می باشد. با استفاده از فرمول كوكران و به روش تصادفي 329 نفر به عنوان نمونه آماری انتخاب شد. پرسشنامه مورد استفاده در این پژوهش شامل پرسشنامه 55 سوالی محمودی و همکاران (1393) بود. برای تجزیه و تحلیل داده ها، از نرم افزار SPSS استفاده شد و با روش SAW اجزای مهندسی مجدد فرایند کسب و کار از نظر میزان تأثیر بر چابکی سازمانی رتبه بندی گردید. نتایج نشان داد که که اجزای مهندسی مجدد فرایند کسب و کار بر چابكی سازمان تاثیر معناداری دارد و تاثیرات رهبری و توانمندسازی با ضرایب استاندارد 0.60 و 0.50 نسبت به سایر متغیرها بر چابکی سازمان بسیار بیشتر بود و متغیرهای ارتباطات و همسویی استراتژیک با ضرایب 0.28 و 0.19 کم ترین تاثیر را بر چابکی سازمان دارند. همچنین براساس نتایج اولویت بندی عناصر، جزء رهبری اولویت اول را به خود اختصاص داد و عوامل فرهنگی در آخرین اولویت قرار گرفته است
Additional file 1 of Remnants of horizontal transfers of Wolbachia genes in a Wolbachia-free woodwasp
Creators: name: Queffelec, Joséphine
name: Postma, Alisa
name: Allison, Jeremy D.
name: Slippers, Bernard
Publisher: name: figshare
Year: 2022
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics

description: Additional file 1: Figure S1. Maximum likelihood tree. It was constructed with the protein sequence of ORF1 compared to similar protein sequences of 11 Wolbachia strains and one protein sequence from Diplorickettsia massiliensis (Gammaproteobacteria: Coxiellaceae) (out group). The branch indicated in red represents the position of ORF1 among other Wolbachia protein sequences. All Wolbachia strains are named after their hosts as follows: wAus, Plutella australiana; wCauA, Carposina sasakii; wDi, Diaphorina citri; wNfla, Nomada flava; wNleu, Nomada leucophthalma; wNo, Drosophila simulans; wNpa, Nomada panzeri; wPip, Culex quinquefasciatus; wPnig, Pentalonia nigronervosa; wStri, Laodelphax striatellus; wVulC, Armadillidium vulgare.
Correlation, Breit and Quantum Electrodynamics effects on energy level and transition properties of W$^{54+}$ ion
Creators: name: Ding, XiaoBin
name: Sun, Rui
name: Koike, Fumihiro
name: Kato, Daiji
name: Murakami, Izumi
name: Sakaue, Hiroyuki A
name: Dong, Chenzhong
Publisher: name: arXiv
Year: 2017
Subjects: subject: Atomic Physics (physics.atom-ph)
subject: FOS: Physical sciences

description: The electron correlation effects and Breit interaction as well as Quantum Electro-Dynamics (QED) effects were expected to have important contribution to the energy level and transition properties of heavy highly charged ions. The ground states [Ne]$3s^{2}3p^{6}3d^{2}$ and first excited states [Ne]3s$^{2}3p^{5}3d^{3}$ of W$^{54+}$ ion have been studied by using Multi-Configuration Dirac-Fock method with the implementation of Grasp2K package. A restricted active space was employed to investigate the correlation contribution from different models. The Breit interaction and QED effects were taken into account in the relativistic configuration interaction calculation with the converged wavefunction. It is found that the correlation contribution from 3s and 3p orbital have important contribution to the energy level, transition wavelength and probability of the ground and the first excited state of W$^{54+}$ ion.
Additional file 2: Figure S1. of Selective proliferative response of microglia to alternative polarization signals
Creators: name: Pepe, Giovanna
name: Maglie, Marcella De
name: Minoli, Lucia
name: Villa, Alessandro
name: Maggi, Adriana
name: Vegeto, Elisabetta
Publisher: name: figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: Pharmacology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases
subject: Plant Biology

description: In vitro polarization responses of microglia to IL-4 and CSF-1. A) The expression of M2 polarization genes (Arg1 and Mrc1) was analyzed in primary cultures of microglia following the treatment with vehicle (veh; open boxes), 20 ng/ml IL-4 (closed boxes) or 20 ng/ml CSF-1 (gray boxes). B) The expression of IL-4Rα was analyzed either in microglia cells obtained by immunosorting from the brain of vehicle or IL-4 icv-injected mice (ex vivo) or in primary cultures of microglia (in vitro) as specified above. Bars represent the mean ± SEM of 3 independent experiments, each performed in triplicate. Data sets for each gene were calculated using the 2-ddCt method with respect to the mean value of the vehicle group. Bars represent mean values ± SEM (n = 3). Student’s unpaired t-test, *p
Additional file 11 of Remnants of horizontal transfers of Wolbachia genes in a Wolbachia-free woodwasp
Creators: name: Queffelec, Joséphine
name: Postma, Alisa
name: Allison, Jeremy D.
name: Slippers, Bernard
Publisher: name: figshare
Year: 2022
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics

description: Additional file 11: Table S1. PCR cycling protocol. Tm = Annealing temperature specific to the primer pair (Table 2); * T° decreases by 0.5°C at the start of each cycle.
The signal of ill-defined CPT weakening entanglement in the $B_d$ system
Creators: name: Bernabeu, Jose
name: Botella, Francisco J.
name: Mavromatos, Nick E.
name: Nebot, Miguel
Publisher: name: arXiv
Year: 2016
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: In the presence of quantum gravity fluctuations (space-time foam), the CPT operator may be ill-defined. Its perturbative treatment leads to a modification of the Einstein-Podolsky-Rosen correlation of the neutral meson system by adding an Entanglement-weakening term of the wrong exchange symmetry, the $ω$-effect. In the current paper we identify how to probe the complex $ω$ in the entangled $B_d$-system using Flavour(f)-CP(g) eigenstate decay channels: the connection between the Intensities for the two time-ordered decays (f, g) and (g, f) is lost. Appropriate observables are constructed allowing independent experimental determinations of Re($ω$) and Im($ω$), disentangled from CPT violation in the evolution Hamiltonian Re($θ$) and Im($θ$). 2-$σ$ tensions for both Re($θ$) and Im($ω$) are shown to be uncorrelated.
description: 18 pages, 4 figures, 1 table
Additional file 1: Table S1. of Differences in global gene expression in muscle tissue of Nellore cattle with divergent meat tenderness
Creators: name: Fonseca, Larissa
name: Gimenez, Daniele
name: Danielly Dos Santos Silva
name: Barthelson, Roger
name: Baldi, Fernando
name: Ferro, Jesus
name: Albuquerque, Lucia
Publisher: name: figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Samples number (N), classification of the sample, shear force (kgf/cm2), number of transcripts aligned in pairs (N reads), and percentage of transcripts aligned in pairs (% reads). (DOCX 16 kb)
International Workshop on Digital Twins for Smart Health
Creators: name: Deng, Jun
name: Ding, Ying
name: Achenie, Luke
name: Liu, Jinwei
name: Pan, Shimei
name: Purushotham, Sanjay
Publisher: name: ACM
Year: 2023
Subjects: Multiscale modeling
Healthcare applications
Digital twin

description: WWW '23 Companion: Companion Proceedings of the ACM Web Conference 2023
Identifying Partisan Slant in News Articles and Twitter during Political Crises
Creators: name: Karamshuk, Dmytro
name: Lokot, Tetyana
name: Pryymak, Oleksandr
name: Sastry, Nishanth
Publisher: name: arXiv
Year: 2017
Subjects: subject: Social and Information Networks (cs.SI)
subject: FOS: Computer and information sciences

description: In this paper, we are interested in understanding the interrelationships between mainstream and social media in forming public opinion during mass crises, specifically in regards to how events are framed in the mainstream news and on social networks and to how the language used in those frames may allow to infer political slant and partisanship. We study the lingual choices for political agenda setting in mainstream and social media by analyzing a dataset of more than 40M tweets and more than 4M news articles from the mass protests in Ukraine during 2013-2014 - known as "Euromaidan" - and the post-Euromaidan conflict between Russian, pro-Russian and Ukrainian forces in eastern Ukraine and Crimea. We design a natural language processing algorithm to analyze at scale the linguistic markers which point to a particular political leaning in online media and show that political slant in news articles and Twitter posts can be inferred with a high level of accuracy. These findings allow us to better understand the dynamics of partisan opinion formation during mass crises and the interplay between main- stream and social media in such circumstances.
description: International Conference on Social Informatics (SocInfo 2016)
Spectral shapes of forbidden argon beta decays as background component for rare-event searches
Creators: name: Kostensalo, J.
name: Suhonen, J.
name: Zuber, K.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Nuclear Theory (nucl-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: The spectral shape of the electrons from the two first-forbidden unique beta- decays of Ar-39 and Ar-42 were calculated for the first time to the next-to-leading order. Especially the spectral shape of the Ar-39 decay can be used to characterise this background component for dark matter searches based on argon. Alternatively, due to the low thresholds of these experiments, the spectral shape can be investigated over a wide energy range with high statistics and thus allow a sensitive comparison with the theoretical predictions. This might lead to interesting results for the ratio of the weak vector and axial-vector constants in nuclei.
description: 9 pages, 6 figures, submitted
Additional file 1: Table S1. of Selective proliferative response of microglia to alternative polarization signals
Creators: name: Pepe, Giovanna
name: Maglie, Marcella De
name: Minoli, Lucia
name: Villa, Alessandro
name: Maggi, Adriana
name: Vegeto, Elisabetta
Publisher: name: figshare
Year: 2017
Subjects: subject: Medicine
subject: Molecular Biology
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Oligonucleotides used in real time PCR assays. (PDF 182 kb)
Spin currents, spin torques, and the concept of spin superfluidity
Creators: name: Rückriegel, Andreas
name: Kopietz, Peter
Publisher: name: arXiv
Year: 2017
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: In magnets with non-collinear spin configuration the expectation value of the conventionally defined spin current operator contains a contribution which renormalizes an external magnetic field and hence affects only the precessional motion of the spin polarization. This term, which has been named angular spin current by Sun and Xie [Phys. Rev B 72, 245305 (2005)], does not describe the translational motion of magnetic moments. We give a prescription how to separate these two types of spin transport and show that the translational movement of the spin is always polarized along the direction of the local magnetization. We also show that at vanishing temperature the classical magnetic order parameter in magnetic insulators cannot carry a translational spin current, and elucidate how this affects the interpretation of spin supercurrents.
description: 8 pages, 3 figures
Discrete Knot Ejection from the Jet in a Nearby Low Luminosity Active Galactic Nucleus, M81*
Creators: name: King, Ashley L.
name: Miller, Jon M.
name: Bietenholz, Michael
name: Gültekin, Kayhan
name: Reynolds, Mark T.
name: Mioduszewski, Amy
name: Rupen, Michael
name: Bartel, Norbert
Publisher: name: arXiv
Year: 2016
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: Observational constraints of relativistic jets from black holes has largely come from the most powerful and extended jets\cite{Jorstad05,Asada14}, leaving the nature of the low luminosity jets a mystery\cite{Falcke04}. M81* is one of the nearest low-luminosity jets, which underwent an extremely large radio flare in 2011, allowing us to study compact core emission with unprecedented sensitivity and linear resolution. Utilizing a multi-wavelength campaign, we were able to track the flare as it re-brightened and became optically thick. Simultaneous X-ray observations indicated the radio re-brightening was preceded by a low energy X-ray flare at least $t_{\rm delay}>12\ {\rm days}$ prior. Associating the time delay between the two bands as the cooling time in a synchrotron flare\cite{Urry97,Bai03}, we find the magnetic field strength was $1.9
description: 38 pages, 7 figures, published in Nature Physics
Additional file 1: of Sensitive detection of HIV-1 resistance to Zidovudine and impact on treatment outcomes in low- to middle-income countries
Creators: name: Gibson, Richard
name: Nickel, Gabrielle
name: Crawford, Michael
name: Kyeyune, Fred
name: Venner, Colin
name: Immaculate Nankya
name: Nabulime, Eva
name: Ndashimye, Emmanuel
name: Poon, Art
name: Salata, Robert
name: Kityo, Cissy
name: Mugyenyi, Peter
name: QuiĂąones-Mateu, Miguel
name: Arts, Eric
Publisher: name: figshare
Year: 2017
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: FOS: Biological sciences

description: Multilingual abstracts in the five official working languages of the United Nations. (PDF 667Â kb)
Additional file 1 of Dissimilarity of microbial diversity of pond water, shrimp intestine and sediment in Aquamimicry system
Creators: name: Zeng, Shenzheng
name: Khoruamkid, Sukontorn
name: Kongpakdee, Warinphorn
name: Wei, Dongdong
name: Yu, Lingfei
name: Wang, Hao
name: Deng, Zhixuan
name: Weng, Shaoping
name: Huang, Zhijian
name: He, Jianguo
name: Satapornvanit, Kriengkrai
Publisher: name: figshare
Year: 2020
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 1: Table S1. Average shrimp weight performance every 15 days (g). Table S2. Average shrimp length performance every 15 days (cm). Figure S1. Microbial composition of water, intestine and sediment habitats at phylum level. Figure S2. Microbial composition of water, intestine and sediment habitats at genus level. Figure S3. Effect of culture stages and water physical chemical factors on microbial community.