cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
DEVELOPMENT OF CHEMICAL PROTEOMIC APPROACHES TO STUDY VIRAL ENDOCYTOSIS AND PHOSPHOPROTEOMICS
Creators: name: Srivastava, Mayank
Publisher: name: Purdue University Graduate School
Year: 2019
Subjects: Biochemistry and cell biology not elsewhere classified
Analytical chemistry not elsewhere classified
Proteins and peptides
Analytical biochemistry
Virology
Proteomics and intermolecular interactions (excl. medical proteomics)

description: A significant development in mass spectrometry instrumentation and software in the past decade has led to its application in solving complex biological problems. One of the emerging areas is Chemical Proteomics that involves design and use of chemical reagents to probe protein functions in ‘a live cell’ environment. Another aspect of Chemical Proteomics is the identification of target proteins of a drug or small molecule. This is assisted by photoreactive groups, which on exposure to UV light, covalently link the target proteins that can be purified by affinity-based enrichment followed by mass-spectrometric identification. This phenomenon of Photoaffinity labeling (PAL) has been widely used in a broad range of applications. Herein, we have designed chemical tools to study Zika endocytosis and phosphoproteomics. Zika virus has attracted the interest of researchers globally, following its outbreak in 2016. While a significant development has been made in understanding the structure and pathogenesis, the actual mechanism of Zika entry into host cells is largely unknown. We designed a chemical probe to tag the live virus, leading to the identification of the virus receptors and other host factors involved in viral entry. We further validated neural cell adhesion molecule (NCAM1) as a host protein involved in early phase entry of Zika virus into Vero cells. The second aspect is the development of the DIGE (Difference Gel Electrophoresis) technology for phosphoproteomics. Phosphoproteins are known to be involved in various signaling pathways and implicated in multiple diseased states. We designed chemical reagents composed of titanium (IV) ion, diazirine and a fluorophore, to covalently label the phosphoproteins. Cyanine3 and cyanine5 fluorophores were employed to reveal the difference in phosphorylation between samples for the comparative proteomics. Thus far, we have successfully demonstrated the labeling of standard phosphoproteins in both simple and complex protein mixtures, and the future efforts are towards applying the technology to identify phosphoproteins in a cell lysate.
Additional file 2 of Intrauterine growth pattern in Butajira HDSS, Southern Ethiopia: BUNMAP pregnancy cohort
Creators: name: Mengistu, Yalemwork G.
name: Hailemariam, Damen
name: Roro, Meselech A.
name: Endris, Bilal S.
name: Tesfamariam, Kokeb
name: Gebreyesus, Seifu H.
Publisher: name: figshare
Year: 2024
Subjects: Medicine
Cell Biology
Biotechnology
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified
Developmental Biology

description: Additional file 2: S Table 2. Growth chart for fetal biparietal diameter (outer-inner) Butajira Ethiopia, 2018-2019.
sj-pdf-1-sci-10.1177_00368504211031364 – Supplemental material for Evolution of initiation rites during the Austronesian dispersal
Creators: name: Bentley, R Alexander
name: Moritz, William R
name: Ruck, Damian J
name: O’Brien, Michael J
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Supplemental material, sj-pdf-1-sci-10.1177_00368504211031364 for Evolution of initiation rites during the Austronesian dispersal by R Alexander Bentley, William R Moritz, Damian J Ruck and Michael J O’Brien in Science Progress
Supplementary Material 1 - Supplemental material for A Useful Clinical Tool for Psoriasis
Creators: name: Nabieva, Karina
name: Vender, Ronald
Publisher: name: SAGE Journals
Year: 2021
Subjects: Medicine

description: Supplemental material, Supplementary Material 1, for A Useful Clinical Tool for Psoriasis by Karina Nabieva and Ronald Vender in Journal of Cutaneous Medicine and Surgery
Late presentation for HIV care across Europe: update from the Collaboration of Observational HIV Epidemiological Research Europe (COHERE) study, 2010 to 2013
Creators: name: Hamouda, Osamah
name: Gunsenheimer-Bartmeyer, Barbara
Publisher: name: Robert Koch-Institut, Infektionsepidemiologie
Year: 2015
Subjects: subject: Humans
subject: Female
subject: Male
subject: Adult
subject: Middle Aged
subject: Risk Factors
subject: Time Factors
subject: Cohort Studies
subject: HIV Infections/epidemiology
subject: Prevalence
subject: Europe/epidemiology
subject: Incidence
subject: Logistic Models
subject: CD4 Lymphocyte Count
subject: Multivariate Analysis
subject: Cooperative Behavior
subject: Disease Progression
subject: HIV Infections/diagnosis
subject: HIV Seropositivity/epidemiology
subject: Substance Abuse Intravenous/epidemiology
subject: AIDS Serodiagnosis
subject: Delayed Diagnosis/statistics & numerical data
subject: 610 Medizin

description: Late presentation (LP) for HIV care across Europe remains a significant issue. We provide a cross-European update from 34 countries on the prevalence and risk factors of LP for 2010–2013. People aged ≥ 16 presenting for HIV care (earliest of HIV-diagnosis, first clinic visit or cohort enrolment) after 1 January 2010 with available CD4 count within six months of presentation were included. LP was defined as presentation with a CD4 count
Proximate nutritive values, antioxidant capacity, antimicrobial properties and profiling the chemical content of opuntia stricta cladodes and fruit peel by HPLC–DAD-ESI/MS analyses
Creators: name: Elouazkiti, Mohammad
name: Elyacoubi, Houda
name: Gadhi, Chemseddoha
name: Bouamama, Hafida
name: Rochdi, Atmane
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Plant Biology
subject: Virology

description: The study characterises the phenolic compounds in ethanol, butanol, and ethyl acetate extracts from the fruit peels and cladodes of Opuntia stricta (syn. Opuntia dillenii (Ker-Gawl) Haw), from Morocco using UHPLC/DAD/ESI-MS. Additionally, the study evaluates the antimicrobial and antioxidant activities of these extracts. Thirteen phenolic compounds were found in Opuntia stricta extracts, such as flavonoids (kaempferol 3-O-arabinoside, isorhamnetin rhamnosyl-rutinoside, quercetin 3-O-rutinoside, isorhamnetin-3-O-rutinoside, and isorhamnetin) and phenolic acid. The fruit peels were found to contain the highest phenolic content, protein, and total sugars. The antibacterial effect was investigated in vivo. The most active extract was the ethyl acetate extract of fruit peels and cladodes against Staphylococcus aureus and P. aeruginosa, with inhibition zone diameters of 16.2 and 15 mm, respectively, followed by dichloromethane extract, with zone diameters of 13.8 and 14 mm, respectively. Our results revealed higher antioxidant activity for the ethyl acetate and butanol extracts from fruit peels than cladodes.
sj-pdf-1-nms-10.1177_14614448211027393 – Supplemental material for More diverse, more politically varied: How social media, search engines and aggregators shape news repertoires in the United Kingdom
Creators: name: Fletcher, Richard
name: Kalogeropoulos, Antonis
name: Nielsen, Rasmus Kleis
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 200199 Communication and Media Studies not elsewhere classified
subject: FOS: Media and communications

description: Supplemental material, sj-pdf-1-nms-10.1177_14614448211027393 for More diverse, more politically varied: How social media, search engines and aggregators shape news repertoires in the United Kingdom by Richard Fletcher, Antonis Kalogeropoulos and Rasmus Kleis Nielsen in New Media & Society
Additional file 4 of Intrauterine growth pattern in Butajira HDSS, Southern Ethiopia: BUNMAP pregnancy cohort
Creators: name: Mengistu, Yalemwork G.
name: Hailemariam, Damen
name: Roro, Meselech A.
name: Endris, Bilal S.
name: Tesfamariam, Kokeb
name: Gebreyesus, Seifu H.
Publisher: name: figshare
Year: 2024
Subjects: Medicine
Cell Biology
Biotechnology
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified
Developmental Biology

description: Additional file 4: S Table 4. Growth chart for fetal head circumference Butajira Ethiopia, 2018-2019.
sj-pdf-1-cad-10.1177_00111287211029873 – Supplemental material for Understanding Knife Crime and Trust in Police with Young People in East London
Creators: name: Skarlatidou, Artemis
name: Ludwig, Lina
name: Solymosi, Reka
name: Bradford, Ben
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 160299 Criminology not elsewhere classified
subject: FOS: Law

description: Supplemental material, sj-pdf-1-cad-10.1177_00111287211029873 for Understanding Knife Crime and Trust in Police with Young People in East London by Artemis Skarlatidou, Lina Ludwig, Reka Solymosi and Ben Bradford in Crime & Delinquency
Demand-Driven Static Analysis of Heap-Manipulating Programs
Creators: name: Sun, Chenguang
Publisher: name: Purdue University Graduate School
Year: 2019
Subjects: Software engineering not elsewhere classified
Programming languages

description: Modern Java application frameworks present significant challenges for existing static analysis algorithms. Such challenges include large-scale code bases, heap-carried dependency, and asynchronous control flow caused by message passing.Existing analysis algorithms are not suitable to deal with these challenges. One reason is that analyses are typically designed to operate homogeneously on the whole program. This leads to scalability problems when the analysis algorithms are used on applications built as plug-ins of large frameworks, since the framework code is analyzed together with the application code. Moreover, the asynchronous message passing of the actor model adopted by most modern frameworks leads to control flows which are not modeled by existing analyses.This thesis presents several techniques for more powerful debugging and program understanding tools based on slicing. In general, slicing-based techniques aim to discover interesting properties of a large program by only reasoning about the relevant part of the program (typically a small amount of code) precisely, abstracting away the behavior of the rest of the program.The key contribution of this thesis is a demand-driven framework to enable precise and scalable analyses on programs built on large frameworks. A slicing algorithm, which can handle heap-carried dependence, is used to identify the program elements relevant to an analysis query. We instantiated the framework to infer correlations between registration call sites and callback methods, and resolve asynchronous control flows caused by asynchronous message passing.
Additional file 1 of Impact of tooth brushing on oral bacteriota and health care-associated infections among ventilated COVID-19 patients: an intervention study
Creators: name: Gregorczyk-Maga, Iwona
name: Pałka, Anna
name: Fiema, Mateusz
name: Kania, Michal
name: Kujawska, Anna
name: Maga, Paweł
name: Jachowicz-Matczak, Estera
name: Romaniszyn, Dorota
name: Chmielarczyk, Agnieszka
name: Żółtowska, Barbara
name: Wójkowska-Mach, Jadwiga
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1. Appendix A1. Beck Oral Assessment Score (BOAS). Appendix A2. Oral care procedures.
title: Prunier Japonais :
title: Principes directeurs pour la conduite de l’examen de la distinction, de l’homogénéité et de la stabilité.
titleType: Subtitle
Creators: name: International Union For The Protection Of New Varieties Of Plants..,
Publisher: name: International Union for the Protection of New Varieties of Plants
Year: 0
Subjects: Group identity.
New Varieties of Plants
Japanese Plum

description: Ces principes directeurs (“principes directeurs d’examen”) visent à approfondir les principes énoncés dans l’introduction générale (document TG/1/3) et dans les documents TGP qui s’y rapportent afin de donner des indications concrètes détaillées pour l’harmonisation de l’examen de la distinction, de l’homogénéité et de la stabilité (DHS) et, en particulier, à identifier des caractères convenant à l’examen DHS et à la production de descriptions variétales harmonisées.
Comprehensive Computational Analysis of Chromatin-Enriched RNAs Reveal Both Active and Repressive Cis-Regulatory Non-coding RNAs
Creators: name: Sun, Xiangying
Publisher: name: Purdue University Graduate School
Year: 2019
Subjects: Bioinformatics and computational biology not elsewhere classified
Epigenetics (incl. genome methylation and epigenomics)
Genomics

description: Long noncoding RNAs (lncRNAs) localize in the cell nucleus and influence gene expression through a variety of molecular mechanisms. RNA sequencing of two biochemical fractions of nuclei reveals a unique class of lncRNAs, termed chromatin-enriched nuclear RNAs (cheRNAs) that are tightly bound to chromatin and putatively function to cis-activate gene expression. Until now, a rigorous analytic pipeline for nuclear RNA-seq has been lacking. In this study, we survey four computational strategies for nuclear RNA-seq data analysis and show that a new pipeline, Tuxedo, outperforms other approaches. Tuxedo not only assembles a more complete transcriptome, but also identifies cheRNA with higher accuracy. We have used Tuxedo to analyze gold-standard K562 cell datasets and further characterize the genomic features of intergenic cheRNA (icheRNA) and their similarity to those of enhancer RNA (eRNA). Moreover, we quantify the transcriptional correlation of icheRNA and adjacent genes, and suggest that icheRNA may be the cis-acting transcriptional regulator that is more positively associated with neighboring gene expression than eRNA predicted by state-of-art method or CAGE signal. We also explore two novel genomic associations, suggesting cheRNA may have diverse functions. A possible new role of H3K9me3 modification coincident with icheRNA may be associated with active enhancer derived from ancient mobile elements, while a potential cis-repressive function of antisense cheRNA (as-cheRNA) is likely to be involved in transiently modulating cell type-specific cis-regulation.
Additional file 1 of Applications of humic and fulvic acid under saline soil conditions to improve growth and yield in barley
Creators: name: Alsudays, Ibtisam Mohammed
name: Alshammary, Fowzia Hamdan
name: Alabdallah, Nadiyah M.
name: Alatawi, Aishah
name: Alotaibi, Mashael M.
name: Alwutayd, Khairiah Mubarak
name: Alharbi, Maha Mohammed
name: Alghanem, Suliman M. S.
name: Alzuaibr, Fahad Mohammed
name: Gharib, Hany S.
name: Awad-Allah, Mamdouh M. A.
Publisher: name: figshare
Year: 2024
Subjects: subject: Plant Biology
subject: FOS: Biological sciences

description: Supplementary Material 1.
Immunoproteasomal Processing of IsoLG-Adducted Proteins Is Essential for Hypertension
Creators: name: de la Visitación, Néstor
name: Chen, Wei
name: Krishnan, Jaya
name: Van Beusecum, Justin
name: Amarnath, Venkataraman
name: Hennen, Elizabeth
name: Zhao, Shilin
name: Saleem, Mohammad
name: Ao, Mingfang
name: Dikalov, Sergey I.
name: Dikalova, Anna E.
name: Harrison, David
name: Patrick, David
Publisher: name: Health Research Alliance
Year: 2024
Subjects: classificationCode: 320101
subject: Cardiology (incl. cardiovascular diseases)
classificationCode: 321401
subject: Basic pharmacology

description:  
          Background: Hypertension is characterized by CD8+ (cluster differentiation 8) T cell activation and infiltration into peripheral tissues. CD8+  T cell activation requires proteasomal processing of antigenic  proteins. It has become clear that isoLG (isolevuglandin)-adduced  peptides are antigenic in hypertension; however, IsoLGs inhibit the  constitutive proteasome. We hypothesized that immunoproteasomal  processing of isoLG-adducts is essential for CD8+ T cell activation and inflammation in hypertension.     
          Methods: IsoLG adduct processing was studied in murine dendritic cells  (DCs), endothelial cells (ECs), and B8 fibroblasts. The role of the  proteasome and the immunoproteasome in Ang II (angiotensin II)-induced  hypertension was studied in C57BL/6 mice treated with bortezomib  or the immunoproteasome inhibitor PR-957 and by studying mice lacking 3  critical immunoproteasome subunits (triple knockout mouse). We also  examined hypertension in mice lacking the critical immunoproteasome  subunit LMP7 (large multifunctional peptidase 7) specifically in either  DCs or ECs.     
          Results: We found that oxidant stress increases the presence of isoLG  adducts within MHC-I (class I major histocompatibility complex), and  immunoproteasome overexpression augments this. Pharmacological or  genetic inhibition of the immunoproteasome attenuated hypertension and  tissue inflammation. Conditional deletion of LMP7 in either DCs or ECs  attenuated hypertension and vascular inflammation. Finally, we defined  the role of the innate immune receptors STING (stimulator of interferon  genes) and TLR7/8 (toll-like receptor 7/8) as drivers of LMP7 expression  in ECs.     
          Conclusions: These studies define a previously unknown role of the immunoproteasome in DCs and ECs in CD8+ T cell activation. The immunoproteasome in DCs and ECs is critical for isoLG-adduct presentation to CD8+ T cells, and in the endothelium, this guides homing and infiltration of T cells to specific tissues.
Internationale Ebola-Hilfe: Stigmatisierte Helfer
Creators: name: Gertler, Maximilian
name: Höhn, Christoph
name: Kleine, Christian
name: Kratz, Thomas
Publisher: name: Robert Koch-Institut, Biologische Sicherheit
Year: 2015
Subjects: subject: 610 Medizin

description: „Bist Du eigentlich in Quarantäne und ansteckend?“ – „Nein, bin ich nicht!“ Rückkehrer aus dem Ebola-Einsatz kämpfen mit oft irrationalen Ängsten ihrer Umgebung.
sj-docx-1-sjp-10.1177_14034948211024483 – Supplemental material for One Health practices across key agencies in Sweden – Uncovering barriers to cooperation, communication and coordination
Creators: name: Humboldt-Dachroeden, Sarah
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 111799 Public Health and Health Services not elsewhere classified
subject: FOS: Health sciences

description: Supplemental material, sj-docx-1-sjp-10.1177_14034948211024483 for One Health practices across key agencies in Sweden – Uncovering barriers to cooperation, communication and coordination by Sarah Humboldt-Dachroeden in Scandinavian Journal of Public Health
Additional file 7 of Intrauterine growth pattern in Butajira HDSS, Southern Ethiopia: BUNMAP pregnancy cohort
Creators: name: Mengistu, Yalemwork G.
name: Hailemariam, Damen
name: Roro, Meselech A.
name: Endris, Bilal S.
name: Tesfamariam, Kokeb
name: Gebreyesus, Seifu H.
Publisher: name: figshare
Year: 2024
Subjects: Medicine
Cell Biology
Biotechnology
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified
Developmental Biology

description: Additional file 7: S Table 7. Growth chart for fetal femur length/Abdominal circumference ratio, Butajira Ethiopia,2018-2019.
Cost and health impact analysis of herpes zoster vaccination in Norway
Creators: name: Flem, Elmira
name: Graham, Jonathan
name: Yi, Zinan
name: Wisløff, Torbjørn
name: Johnson, Kelly D.
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences

description: A decision analytic model was developed to estimate the cost-effectiveness of a national vaccination program against herpes zoster in Norway. The model analyzed six vaccination scenarios that included the live-attenuated zoster vaccine under different target ages of vaccination (60, 65, and 70 years) compared with no vaccination. A catch-up program implemented in the first year of the vaccination was included in three of the scenarios. The model followed the population of Norway over a 40-year time horizon to estimate costs and outcomes associated with vaccination. Immunization costs, costs related to herpes zoster (both healthcare sector and non-healthcasre sector), the quality of life gains due to avoided cases of herpes zoster, and quality-of-life losses due to vaccine-related adverse events were estimated. A national vaccination program would result in reduction of the number of herpes zoster cases and decreased burden of illness. Vaccinating adults at 65 years of age with catch-up up to 70 years in the first year of the program was the most cost-effective strategy with the incremental cost per quality-adjusted life-year gained at NOK (Norwegian Krone) 245,459 from the societal perspective and NOK 248,637 from the health care system perspective.
sj-pdf-1-imr-10.1177_03000605211025344 - Supplemental material for Life-threatening brachial artery hemorrhage and a lethal outcome in patients with neurofibromatosis type 1: two case reports and a review of the literature
Creators: name: Lee, Jisun
name: Kim, Yook
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: Cardiology
subject: 110599 Dentistry not elsewhere classified
subject: FOS: Clinical medicine
subject: 110305 Emergency Medicine
subject: 110306 Endocrinology
subject: 110308 Geriatrics and Gerontology
subject: 110904 Neurology and Neuromuscular Diseases
subject: 111099 Nursing not elsewhere classified
subject: 111199 Nutrition and Dietetics not elsewhere classified
subject: 111299 Oncology and Carcinogenesis not elsewhere classified
subject: 110314 Orthopaedics
subject: 110604 Sports Medicine
subject: 110315 Otorhinolaryngology
subject: 111702 Aged Health Care
subject: 111403 Paediatrics
subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: 110319 Psychiatry (incl. Psychotherapy)
subject: 111799 Public Health and Health Services not elsewhere classified
subject: 110203 Respiratory Diseases
subject: 160807 Sociological Methodology and Research Methods
subject: FOS: Sociology
subject: 110323 Surgery

description: Supplemental material, sj-pdf-1-imr-10.1177_03000605211025344 for Life-threatening brachial artery hemorrhage and a lethal outcome in patients with neurofibromatosis type 1: two case reports and a review of the literature by Jisun Lee and Yook Kim in Journal of International Medical Research
Additional file 1 of Carbon and energy balance of biotechnological glycolate production from microalgae in a pre-industrial scale flat panel photobioreactor
Creators: name: Wagner, Heiko
name: Schad, Antonia
name: Höhmann, Sonja
name: Briol, Tim Arik
name: Wilhelm, Christian
Publisher: name: figshare
Year: 2024
Subjects: subject: Plant Biology
subject: FOS: Biological sciences

description: Additional file 1: Table S1. Reactor components. Table S2. Theoretical volume activity during one year of production if the duration of the glycolate production phase is doubled compared to the measurements presented in the manuscript. The number of runs will be reduced to 24 runs y−1. Figure S1. Flat panel photobioreactor. A Schematic side view. B Schematic overview. C Photobioreactor in operation. Figure S2. LED emission spectrum at a light intensity of PAR = 250 µ mol photons m−2 s−1.
Unified Field Theory GPT-HMT
Creators: name: McCullough, Nathan Duane
Publisher: name: Zenodo
Year: 2025
Subjects: Unified Field Theory

description: GPT-HMT (Generalized Projection Tensor– Holographic Memory Theory) is a new physical framework that redefines space, matter, time, and energy—not through curvature or quantum probabilities—but through geometric memory and resistance to projection. Where traditional physics treats vacuum as empty and passive, GPT-HMT treats it as active, saturable, and structured. Every particle, force, and field is a projection into this vacuum, and the vacuum pushes back.
Underlying data: Correlation of skin moisture and serum urea level toward dermatology life quality index (DLQI) in chronic kidney disease patients on hemodialysis: A cross-sectional study
Creators: name: Dalimunthe, Dina Arwina
name: Lubis, Flora Marlita
name: Hazlianda, Cut Putri
name: Sinaga, Riana Miranda
name: Salim, Stephanie
Publisher: name: figshare
Year: 2024
Subjects: classificationCode: 320205
subject: Dermatology

description: This is the underlying data (Sample size calculation) for article entitles: Correlation of skin moisture and serum urea level toward dermatology life quality index (DLQI) in chronic kidney disease patients on hemodialysis: A cross-sectional study, by Dalimunthe et al. This file describes the calculation used to estimate the minimum required sample.
The Metagenomics and Metadesign of the Subways and Urban Biomes (MetaSUB) International Consortium inaugural meeting report
Creators: name: Koch-Institut, Robert
Publisher: name: Robert Koch-Institut
Year: 2016
Subjects: subject: Microbiome
subject: Biosynthetic gene clusters
subject: Built environment
subject: Next-generation sequencing
subject: Antimicrobial resistance markers
subject: 610 Medizin

description: The Metagenomics and Metadesign of the Subways and Urban Biomes (MetaSUB) International Consortium is a novel, interdisciplinary initiative comprised of experts across many fields, including genomics, data analysis, engineering, public health, and architecture. The ultimate goal of the MetaSUB Consortium is to improve city utilization and planning through the detection, measurement, and design of metagenomics within urban environments. Although continual measures occur for temperature, air pressure, weather, and human activity, including longitudinal, cross-kingdom ecosystem dynamics can alter and improve the design of cities. The MetaSUB Consortium is aiding these efforts by developing and testing metagenomic methods and standards, including optimized methods for sample collection, DNA/RNA isolation, taxa characterization, and data visualization. The data produced by the consortium can aid city planners, public health officials, and architectural designers. In addition, the study will continue to lead to the discovery of new species, global maps of antimicrobial resistance (AMR) markers, and novel biosynthetic gene clusters (BGCs). Finally, we note that engineered metagenomic ecosystems can help enable more responsive, safer, and quantified cities.
Consumer’s Preferences among Low-Calorie Food Alternatives in Casual Dining Restaurants
Creators: name: Sun, Xiaodi
Publisher: name: Purdue University Graduate School
Year: 2019
Subjects: Marketing management (incl. strategy and customer relations)

description: Obesity is an urgent health problem with restaurants accounting for about half of all food expenditure in the U.S. Understanding consumer’s preferences for low-calorie food could help interested restaurants in the foodservice industry facilitate consumers’ low-calorie choices in a positive way without compromising their ability to efficiently meet consumers’ preferences. The purpose of this study was to (1) investigate consumers’ preferences among four forms of low-calorie food alternatives: reformulation, elimination, resizing, and substitution; and (2) to explore which consumers are likely to choose low-calorie menu items and understand what motivates them to make healthy choices using the theory of planned behavior. Results showed that consumers have a clear preference towards elimination and substitution, rather than resizing and reformulation. The trend that high-calorie ingredients were often eliminated or substituted with healthier ingredients highlighted the importance and effectiveness of menu calorie labeling as consumers may adjust their food choices based on calorie information. Moreover, consumers showed high taste expectations for traditional favorite foods such as pizza and burger. Therefore, the entrée type of menu items is more feasible and amenable to be modified to decrease the calorie content. Marketing practices could be used to educate consumers about new low-calorie alternatives to create the demand and promote these items. Lastly, food choice motives were found to influence consumers’ behavioral intention, indicating that they were meaningful additions to the TPB model.
sj-pdf-1-wox-10.1177_07308884211028277 - Supplemental material for Narrative Continuity/Rupture: Projected Professional Futures amid Pervasive Employment Precarity
Creators: name: Ayala-Hurtado, Elena
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 150310 Organisation and Management Theory
subject: FOS: Economics and business
subject: Sociology
subject: FOS: Sociology

description: Supplemental material, sj-pdf-1-wox-10.1177_07308884211028277 for Narrative Continuity/Rupture: Projected Professional Futures amid Pervasive Employment Precarity by Elena Ayala-Hurtado in Work and Occupations
Recent loss of closed forests is associated with Ebola virus disease outbreaks
Creators: name: Olivero, Jesús
name: Fa, John E.
name: Real, Raimundo
name: Márquez, Ana L.
name: Farfán, Miguel A.
name: Vargas, J. Mario
name: Gaveau, David
name: Salim, Mohammad A.
name: Park, Douglas
name: Suter, Jamison
name: King, Shona
name: Leendertz, Siv Aina
name: Sheil, Douglas
name: Nasi, Robert
Publisher: name: Robert Koch-Institut
Year: 2017
Subjects: subject: 610 Medizin

description: Ebola virus disease (EVD) is a contagious, severe and often lethal form of hemorrhagic fever in humans. The association of EVD outbreaks with forest clearance has been suggested previously but many aspects remained uncharacterized. We used remote sensing techniques to investigate the association between deforestation in time and space, with EVD outbreaks in Central and West Africa. Favorability modeling, centered on 27 EVD outbreak sites and 280 comparable control sites, revealed that outbreaks located along the limits of the rainforest biome were significantly associated with forest losses within the previous 2 years. This association was strongest for closed forests (>83%), both intact and disturbed, of a range of tree heights (5–>19 m). Our results suggest that the increased probability of an EVD outbreak occurring in a site is linked to recent deforestation events, and that preventing the loss of forests could reduce the likelihood of future outbreaks.
Additional file 1 of Cost and economic evidence for asset-based approaches to health improvement and their evaluation methods: a systematic review
Creators: name: Wreford, Alice
name: Birt, Linda
name: Whitty, Jennifer A.
name: Hanson, Sarah
name: Conquer, Susan
name: Wagner, Adam P.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Supplementary Material.
Timeliness in the German surveillance system for infectious diseases: Amendment of the infection protection act in 2013 decreased local reporting time to 1 day
Creators: name: Schumacher, Jakob
name: Diercke, Michaela
name: Salmon, Maëlle
name: Czogiel, Irina
name: Schumacher, Dirk
name: Claus, Hermann
name: Gilsdorf, Andreas
Publisher: name: Robert Koch-Institut, Infektionsepidemiologie
Year: 2017
Subjects: subject: 610 Medizin

description: Time needed to report surveillance data within the public health service delays public health actions. The amendment to the infection protection act (IfSG) from 29 March 2013 requires local and state public health agencies to report surveillance data within one working day instead of one week. We analysed factors associated with reporting time and evaluated the IfSG amendment. Local reporting time is the time between date of notification and date of export to the state public health agency and state reporting time is time between date of arrival at the state public health agency and the date of export. We selected cases reported between 28 March 2012 and 28 March 2014. We calculated the median local and state reporting time, stratified by potentially influential factors, computed a negative binominal regression model and assessed quality and workload parameters. Before the IfSG amendment the median local reporting time was 4 days and 1 day afterwards. The state reporting time was 0 days before and after. Influential factors are the individual local public health agency, the notified disease, the notification software and the day of the week. Data quality and workload parameters did not change. The IfSG amendment has decreased local reporting time, no relevant loss of data quality or identifiable workload-increase could be detected. State reporting time is negligible. We recommend efforts to harmonise practices of local public health agencies including the exclusive use of software with fully compatible interfaces.
sj-doc-1-smo-10.1177_20503121211031126 – Supplemental material for Magnitude and factors associated with anemia among diabetic patients in Ethiopia: A systematic review and meta-analysis
Creators: name: Atlaw, Daniel
name: Tariku, Zerihun
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: Cardiology
subject: 110599 Dentistry not elsewhere classified
subject: FOS: Clinical medicine
subject: 110305 Emergency Medicine
subject: 110306 Endocrinology
subject: 110308 Geriatrics and Gerontology
subject: 110904 Neurology and Neuromuscular Diseases
subject: 111099 Nursing not elsewhere classified
subject: 111199 Nutrition and Dietetics not elsewhere classified
subject: 111299 Oncology and Carcinogenesis not elsewhere classified
subject: 110314 Orthopaedics
subject: 110604 Sports Medicine
subject: 110315 Otorhinolaryngology
subject: 111702 Aged Health Care
subject: 111403 Paediatrics
subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: 110319 Psychiatry (incl. Psychotherapy)
subject: 111799 Public Health and Health Services not elsewhere classified
subject: 110203 Respiratory Diseases
subject: 160807 Sociological Methodology and Research Methods
subject: FOS: Sociology
subject: 110323 Surgery
subject: 70706 Veterinary Medicine
subject: FOS: Veterinary sciences

description: Supplemental material, sj-doc-1-smo-10.1177_20503121211031126 for Magnitude and factors associated with anemia among diabetic patients in Ethiopia: A systematic review and meta-analysis by Daniel Atlaw and Zerihun Tariku in SAGE Open Medicine
Spotlight on measles 2010: Preliminary report of an ongoing measles outbreak in a subpopulation with low vaccination coverage in Berlin, Germany, January- March 2010
Creators: name: Bätzing-Feigenbaum, Jörg
name: Pruckner, U.
name: Beyer, A.
name: Sinn, G.
name: Dinter, A.
name: Mankertz, Annette
name: Siedler, Anette
name: Schubert, A.
name: Suckau, M.
Publisher: name: Robert Koch-Institut
Year: 2010
Subjects: subject: Child
subject: Humans
subject: Germany/epidemiology
subject: Disease Outbreaks/prevention & control
subject: Measles/epidemiology
subject: Vaccination/trends
subject: Measles/prevention & control
subject: Measles Vaccine/therapeutic use
subject: 610 Medizin

description: Since early January 2010, Berlin has been experiencing a measles outbreak with 62 cases as of 31 March. The index case acquired the infection in India. In recent years, measles incidence in Berlin has been lower than the German average and vaccination coverage in school children has increased since 2001. However, this outbreak involves schools and kindergartens with low vaccination coverage and parents with critical attitudes towards vaccination, which makes the implementation of public health interventions challenging.
Etablierung von Referenznetzwerken aus Nationalen Referenzzentren mit assoziierten Konsiliarlaboratorien in Deutschland
Creators: name: Laude, Gabriele
name: Kist, Manfred
name: Krause, Gérard
Publisher: name: Robert Koch-Institut
Year: 2009
Subjects: subject: Konsiliarlaboratorien
subject: Nationale Referenzzentren
subject: National References Centres
subject: Consiliary laboratories
subject: 610 Medizin

description: Das Bundesministerium für Gesundheit fördert in Deutschland seit 1995 Nationale Referenzzentren (NRZ) zur laborgestützten Überwachung ausgewählter Infektionserreger und Syndrome. Die Auswahl erfolgt in Abhängigkeit von der epidemiologischen Relevanz von Erregern oder Syndromen, deren Spezialdiagnostik, Resistenzproblemen und der Notwendigkeit von Maßnahmen des Infektionsschutzes. Gegenwärtig bestehen 18 NRZ, die jeweils für eine Dauer von drei Jahren berufen werden. Zum Ende einer Berufungsphase findet eine Evaluation der NRZ durch ein ausgewähltes Fachgremium statt. Die Bewertung der Arbeit orientiert sich am Aufgabenkatalog für NRZ. Um für ein möglichst breites Spektrum von Krankheitserregern fachliche Kompetenz bereitzustellen, wurden zusätzlich zu den NRZ insgesamt 47 Konsiliarlaboratorien zu weiteren gesundheitsrelevanten Infektionserregern und erregerbedingten klinischen Syndromen mit besonderer infektionsepidemiologischer Bedeutung benannt. Hauptaufgaben sind das Beratungsangebot, insbesondere bei über die Routine hinausgehenden diagnostischen Fragestellungen, sowie spezielle diagnostische Leistungen. Um die bisherigen erfolgreichen Arbeitsleistungen der NRZ und Konsiliarlaboratorien (KL) weiter zu optimieren, ist eine Stärkung der Zusammenarbeit durch Etablierung von Netzwerken vorgesehen. Das Ziel der Netzwerke besteht insbesondere darin, den Erfahrungsaustausch zu diagnostischen Methoden und Präventionsansätzen zu fördern und die Ausstrahlung der Referenzstruktur in die Fläche zu verbessern.
description: The German Federal Ministry of Health has funded National Reference Centres (NRC) for laboratory-based surveillance of selected infection pathogens and infections disease syndromes. This selection is based on the epidemiologic relevance of the pathogens, specific diagnostic requirements, antimicrobial resistance and need for public health measures. Currently there are 18 NRC, nominated for a duration of 3 years. Toward the end of a nomination period, each NRC is evaluated by an expert committee, based on the catalogue of core tasks. In order to expand the spectrum of competencies 47 consiliary laboratories on additional pathogens of special epidemiologic importance have been named. Their main function is to provide information and consultation on special diagnostic issues. In order to further improve the effectiveness and cooperation of the system Networks have been created. The aim of the Networks is to facilitate exchange of diagnostic methods and prevention concepts and to improve the geographic coverage of the services.
Additional file 1 of Sequential deep learning image enhancement models improve diagnostic confidence, lesion detectability, and image reconstruction time in PET
Creators: name: Dedja, Meghi
name: Mehranian, Abolfazl
name: Bradley, Kevin M.
name: Walker, Matthew D.
name: Fielding, Patrick A.
name: Wollenweber, Scott D.
name: Johnsen, Robert
name: McGowan, Daniel R.
Publisher: name: figshare
Year: 2024
Subjects: subject: Artificial Intelligence and Image Processing
subject: FOS: Computer and information sciences

description: Supplementary Material 1
sj-pdf-2-imr-10.1177_03000605211025344 - Supplemental material for Life-threatening brachial artery hemorrhage and a lethal outcome in patients with neurofibromatosis type 1: two case reports and a review of the literature
Creators: name: Lee, Jisun
name: Kim, Yook
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: Cardiology
subject: 110599 Dentistry not elsewhere classified
subject: FOS: Clinical medicine
subject: 110305 Emergency Medicine
subject: 110306 Endocrinology
subject: 110308 Geriatrics and Gerontology
subject: 110904 Neurology and Neuromuscular Diseases
subject: 111099 Nursing not elsewhere classified
subject: 111199 Nutrition and Dietetics not elsewhere classified
subject: 111299 Oncology and Carcinogenesis not elsewhere classified
subject: 110314 Orthopaedics
subject: 110604 Sports Medicine
subject: 110315 Otorhinolaryngology
subject: 111702 Aged Health Care
subject: 111403 Paediatrics
subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: 110319 Psychiatry (incl. Psychotherapy)
subject: 111799 Public Health and Health Services not elsewhere classified
subject: 110203 Respiratory Diseases
subject: 160807 Sociological Methodology and Research Methods
subject: FOS: Sociology
subject: 110323 Surgery

description: Supplemental material, sj-pdf-2-imr-10.1177_03000605211025344 for Life-threatening brachial artery hemorrhage and a lethal outcome in patients with neurofibromatosis type 1: two case reports and a review of the literature by Jisun Lee and Yook Kim in Journal of International Medical Research
The incidence and severe consequences of occupational injuries among informal workers in a developing country
Creators: name: Ronconi, Lucas
name: Anchorena, José
name: Paz, Jorge
Publisher: name: Taylor & Francis
Year: 2025
Subjects: subject: Medicine
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences

description: This article uses novel microdata to estimate the prevalence of occupational injuries among informal workers in a developing country with a segmented labour market like Argentina, and analyses their socio-economic consequences, exploring the heterogeneity according to the formality status of the worker. The results indicate that the prevalence of injuries is roughly similar between informal and formal workers. However, the socio-economic consequences are substantially more severe for informal workers and their families. These consequences include: a reduction in consumption of basic goods and services; and the need for household members – including school-age children and older people – to search for work to compensate for the income drop resulting from the injured worker.
2. A LEI N. 14.133-2021 E A GESTÃO PATRIMONIAL E DESFAZIMENTO DE BENS MÓVEIS INSERVÍVEIS NO ÂMBITO
Creators: name: Ministério Público de Contas do Estado de Minas Gerais
Publisher: name: Zenodo
Year: 2024

description: O artigo pretende examinar os dispositivos da Lei n. 14.133, em vigor desde 1º de abril 2021 (NLCC),em cotejo com os da legislação pretérita (Lei n. 8.666/1993), relacionados ao procedimento de desfazimento debens móveis servíveis e inservíveis, abarcando esclarecimentos sobre bens não patrimoniados e responsáveis pelacondução do procedimento, no âmbito da administração pública federal. A análise dos normativos aponta que odesfazimento de bens é uma poderosa ferramenta de gestão pública, que, alinhada aos princípios da eficiência edo planejamento, pode proporcionar a otimização de recursos, a redução de custos e a renovação do patrimôniopúblico.
title: Porree :
title: Richtlinien für die Durchführung der Prüfung auf Unterscheidbarkeit, Homogenität und Beständigkeit.
titleType: Subtitle
Creators: name: International Union For The Protection Of New Varieties Of Plants..,
Publisher: name: International Union for the Protection of New Varieties of Plants
Year: 0
Subjects: Group identity
Leek
New Varieties of Plants

description: Zweck dieser Richtlinien („Prüfungsrichtlinien“) ist es, die in der Allgemeinen Einführung (Dokument TG/1/3) und deren verbundenen TGP-Dokumenten enthaltenen Grundsätze in detaillierte praktische Anleitung für die harmonisierte Prüfung der Unterscheidbarkeit, der Homogenität und der Beständigkeit (DUS) umzusetzen und insbesondere geeignete Merkmale für die DUS-Prüfung und die Erstellung harmonisierter Sortenbeschreibungen auszuweisen.
sj-pdf-1-cps-10.1177_00104140211024291 – Supplemental Material for Which Jobs for Which Boys? Party Finance and the Politics of State Job Distribution in Africa
Creators: name: Sigman, Rachel
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 160607 International Relations
subject: FOS: Political science

description: Supplemental Material, sj-pdf-1-cps-10.1177_00104140211024291 for Which Jobs for Which Boys? Party Finance and the Politics of State Job Distribution in Africa by Rachel Sigman in Comparative Political Studies
sj-pdf-1-jrt-10.1177_20556683211012885 - Supplemental material for Novel integrative rehabilitation system for the upper extremity: Design and usability evaluation
Creators: name: Burdea, Grigore
name: Kim, Nam
name: Polistico, Kevin
name: Kadaru, Ashwin
name: Roll, Doru
name: Grampurohit, Namrata
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 99999 Engineering not elsewhere classified
subject: FOS: Other engineering and technologies

description: Supplemental material, sj-pdf-1-jrt-10.1177_20556683211012885 for Novel integrative rehabilitation system for the upper extremity: Design and usability evaluation by Grigore Burdea, Nam Kim, Kevin Polistico, Ashwin Kadaru, Doru Roll and Namrata Grampurohit in Journal of Rehabilitation and Assistive Technologies Engineering
The Black Prince of Florence: The Spectacular Life and Treacherous World of Alessandro de’ Medici. Catherine Fletcher. Oxford: Oxford University Press, 2016. xxvii + 308 pp. $29.95.
Creators: name: Gallucci, Mary
Publisher: name: Humanities Commons
Year: 2017
Subjects: subject: Race
subject: Ethnicity
subject: Renaissance
subject: Biography--Study and teaching
subject: Culture--Study and teaching
subject: Blacks--Study and teaching
subject: Italy
subject: Sixteenth century
subject: Seventeenth century
subject: Historiography

description: As the first biography in English of Alessandro de' Medici, this important book raises questions about how historical narratives are constructed and how race has evolved into a critical, if contested, category.
Textual Masculinity and the Exchange of Women in Renaissance Venice. Courtney Quaintance. Toronto: University of Toronto Press, 2015. x + 260 pp. $70.
Creators: name: Gallucci, Mary
Publisher: name: Humanities Commons
Year: 2016
Subjects: subject: Wit and humor
subject: Education
subject: Poetry
subject: Italian literature
subject: Renaissance
subject: Freud, Sigmund, 1856-1939
subject: Women authors

description: I review Quaintance's study of homosocial culture in Renaissance Venice.  I analyze  the issues of gender, sexual violence, and humor discussed in the book.
Additional file 1 of Causal association between helicobacter pylori and atherosclerosis: a two-sample Mendelian randomization
Creators: name: Zhang, Xueyi
name: Shi, Yue
name: Li, Tielin
name: Chang, Ke
name: Gan, Yongyan
name: Feng, Yue
name: Zhou, Xianhua
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Supplementary Material 1.