cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 8: of Contrasting biological potency of particulate matter collected at sites impacted by distinct industrial sources
Creators: name: Thomson, Errol
name: Breznan, Dalibor
name: Karthikeyan, Subramanian
name: MacKinnon-Roy, Christine
name: Vuong, Ngoc
name: Dabek-Zlotorzynska, Ewa
name: Celo, Valbona
name: Charland, Jean-Pierre
name: Kumarathasan, Prem
name: Brook, Jeffrey
name: Vincent, Renaud
Publisher: name: Figshare
Year: 2016
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Ecology
subject: Developmental Biology
subject: Hematology
subject: 60506 Virology

description: Cytotoxic responses of A549 cells to 24 h exposure to size-fractionated particulate matter collected in the vicinity of industrial sites according to the LDH release assay. Lactate dehydrogenase (LDH) release into cell culture supernatants of A549 cells exposed for 24 h to size-fractionated and standard reference particles (left-side) and extracts from corresponding field blank filters that were transported to each site but remained unexposed to ambient air (right side). Data represent LDH release, adjusted for total cellular LDH content. Values are presented as average fold-effect (FE) over control ± standard error (n = 3). HB, Hamilton Beach steel mill; MA, Montréal AIEM petrochemical refinery; MC, Montréal copper smelter; SR, Sarnia petrochemical refinery; SW, Shawinigan aluminum smelter. Size-fractionated and standard reference particles. Three-way ANOVA (Size-fractionated particles): Site x Size (p = 0.002) and Size x Dose (p = 0.018) interactions. Asterisks represent significant pairwise comparisons (Holm-Sidak) as follows: doses within Size significantly different from 0 μg/cm2, or sites within Size significantly different from one another as indicated by brackets (*p
Simulating vacuum arc initiation by coupling emission, heating and plasma processes
Creators: name: Koitermaa, Roni
name: Kyritsakis, Andreas
name: Tiirats, Tauno
name: Zadin, Veronika
name: Djurabekova, Flyura
Publisher: name: arXiv
Year: 2024
Subjects: subject: Plasma Physics (physics.plasm-ph)
subject: Materials Science (cond-mat.mtrl-sci)
subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences

description: Vacuum arcing poses significant challenges for high-field vacuum devices, underscoring the importance of understanding it for their efficient design. A detailed description of the physical mechanisms involved in vacuum arcing is yet to be achieved, despite extensive research. In this work, we further develop the modelling of the physical processes involved in the initiation of vacuum arcing, starting from field emission and leading to plasma onset. Our model concurrently combines particle-in-cell with Monte Carlo collisions (PIC-MCC) simulations of plasma processes with finite element-based calculations of electron emission and the associated thermal effects. Including the processes of evaporation, impact ionization and direct field ionization allowed us to observe the dynamics of plasma buildup from an initially cold cathode surface. We simulated a static nanotip at various local fields to study the thresholds for thermal runaway and plasma initiation, identifying the significance of various interactions. We found that direct field ionization of neutrals has a significant effect at high fields on the order of 10 GV/m. Furthermore, we find that cathode surface interactions such as evaporation, sputtering and bombardment heating play a major role in the initiation of vacuum arcs. Consequently, the inclusion of these interactions in vacuum arc simulations is imperative.
description: 17 pages, 14 figures
Ischnomesus Richardson 1908
Creators: name: Kavanagh, Fiona A.
name: Frutos, Inmaculada
name: Sorbe, Jean Claude
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Isopoda
Ischnomesidae
Ischnomesus

description: Ischnomesus Richardson, 1908
Ischnosoma: G. O. Sars, 1868: 84.
Ischnomesus: Richardson, 1908: 81; Hansen, 1916: 56; Gurjanova, 1932: 40 l; Wolff, 1956: 88; Menzies, 1962: 111; Wolff, 1962: 73; Menzies & George, 1972: 971; Kussakin, 1988: 419; Merrin & Poore, 2003: 290.
Rhabdomesus: Richardson, 1908: 81.
Bactromesus: Wolff, 1962: 83.
Type species: Ischnosoma bispinosum G. O. Sars, 1868 (by monotypy).
Species included: Ischnomesus anacanthus Wolff, 1962; I. andriashevi Birstein, 1960; I. antarcticus Schultz, 1979; I. armatus Hansen, 1916; I. bacilloides (Beddard, 1886); I. bacillopsis (Barnard, 1920); I. bacillus (Beddard, 1886); I. bidens Menzies, 1962; I. birsteini Wolff, 1962; I. bispinosus (G. O. Sars, 1868); I. bruuni Wolff, 1956; I. calcificus Menzies & George, 1972; I. caribbicus Menzies, 1962; I. carolinae Chardy, 1974; I. chardyi Kussakin, 1988; I. decemspinosus Menzies, 1962; I. elegans Menzies, 1962; I. elongatus Birstein, 1963; I. fragilis Birstein, 1971; I. glabra Kensley, 1984; I. gracilis (Birstein, 1960); I. justi Merrin & Poore, 2003; I. latimanus Birstein, 1971; I. magnificus Menzies, 1962; I. multispinis Menzies, 1962; I. norvegicus Svavarsson, 1984; I. paucispinis Menzies, 1962; I. planus Wolff, 1962; I. profundus Hansen, 1916; I. roseus Wolff, 1962; I. simplex Menzies & George, 1972; I. simplissimus Menzies, 1962; I. spaercki Wolff, 1956; I. tasmanensis Merrin & Poore, 2003; I. vinogradovi Birstein, 1963 and I. wolffi Menzies, 1962.
Diagnosis. Pereonites 5–7, pleonite 1 and pleotelson freely articulating. Antennula of at least 6 articles. Maxillipedal palp width equal to or wider than basal endite. Pereopod I carpus with weakly expanded palm. Uropods uniramous, biarticulate.
Remarks. The freely articulating posterior pereonites, pleonite 1 and pleotelson observed in Ischnomesus is a condition presumed to be plesiomorphic, with other genera showing various degrees of fusion of the pereonites (e.g. pereonites 5–7 and pleotelson fused together in genus Haplomesus; see Kavanagh & Wilson 2007). Uniarticulate uropods have been described by Merrin & Poore (2003) for Ischnomesus justi. As this species displays all the other diagnostic characters that characterise Ischnomesus, biarticulate uropods may not be a diagnostic character for the genus. However, as all remaining 35 species and I. harrietae sp. nov. possess uropods with two articles, we have retained it as a generic character until further information on the occurrence of uniarticulate uropods becomes available through the description of additional species.
description: Published as part of Kavanagh, Fiona A., Frutos, Inmaculada & Sorbe, Jean Claude, 2015, Ischnomesus harrietae sp. nov., a new benthic asellote (Crustacea: Isopoda: Ischnomesidae) from bathyal bottoms of the southern Bay of Biscay, pp. 201-217 in Zootaxa 3911 (2) on page 203, DOI: 10.11646/zootaxa.3911.2.3, http://zenodo.org/record/237906
Additional file 7: of Contrasting biological potency of particulate matter collected at sites impacted by distinct industrial sources
Creators: name: Thomson, Errol
name: Breznan, Dalibor
name: Karthikeyan, Subramanian
name: MacKinnon-Roy, Christine
name: Vuong, Ngoc
name: Dabek-Zlotorzynska, Ewa
name: Celo, Valbona
name: Charland, Jean-Pierre
name: Kumarathasan, Prem
name: Brook, Jeffrey
name: Vincent, Renaud
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: Ecology
subject: Developmental Biology
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Cytotoxic responses of A549 cells to 24 h exposure to size-fractionated particulate matter collected in the vicinity of industrial sites according to the resazurin reduction assay. Metabolic reduction of non-fluorescent resazurin in A549 cells exposed for 24 h to size-fractionated and standard reference particles (left-side) and extracts from corresponding field blank filters that were transported to each site but remained unexposed to ambient air (right-side). Values are presented as average fold-effect (FE) over control ± standard error (n = 3 independent experiments). HB, Hamilton Beach steel mill; MA, Montréal AIEM petrochemical refinery; MC, Montréal copper smelter; SR, Sarnia petrochemical refinery; SW, Shawinigan aluminum smelter. Size-fractionated and standard reference particles. Three-way ANOVA (Size-fractionated particles): Site x Size (p
Additional file 7: Table S7. of Molecular alterations induced by a high-fat high-fiber diet in porcine adipose tissues: variations according to the anatomical fat location
Creators: name: Gondret, Florence
name: Vincent, Annie
name: HouĂŠe-Bigot, Magalie
name: Siegel, Anne
name: Lagarrigue, Sandrine
name: Louveau, Isabelle
name: Causeur, David
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Primers used for qPCR analysis. (DOCX 17Â kb)
Additional file 11: of Contrasting biological potency of particulate matter collected at sites impacted by distinct industrial sources
Creators: name: Thomson, Errol
name: Breznan, Dalibor
name: Karthikeyan, Subramanian
name: MacKinnon-Roy, Christine
name: Vuong, Ngoc
name: Dabek-Zlotorzynska, Ewa
name: Celo, Valbona
name: Charland, Jean-Pierre
name: Kumarathasan, Prem
name: Brook, Jeffrey
name: Vincent, Renaud
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Computational Biology

description: Regressions of biological potency against total metals, water-soluble metals, non-water-soluble metals, endotoxin, and PAHs. Table of Pearson correlations and p-values. (PDF 71 kb)
MOESM3 of Global changes in the proteome of Cupriavidus necator H16 during poly-(3-hydroxybutyrate) synthesis from various biodiesel by-product substrates
Creators: name: Sharma, Parveen
name: Jilagamazhi Fu
name: Spicer, Victor
name: Krokhin, Oleg
name: Cicek, Nazim
name: Sparling, Richard
name: Levin, David
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Computational Biology

description: Additional file 3: Figure S2. Linear regression analysis of the log2 expression values for all observed proteins between biological replicates grown with REG-FFA and REG-80 at 24h pi. Log2 expression values observed for biological replicate 1 are plotted on the x-axis, while the corresponding values for biological replicate 2 are plotted on the y-axis.
Ischnomesus
Creators: name: Kavanagh, Fiona A.
name: Frutos, Inmaculada
name: Sorbe, Jean Claude
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Isopoda
Ischnomesidae
Ischnomesus

description: Ischnomesus sp.1
(Fig. 7)
Material examined. One preparatory female (MNHN-IU-2014-4007; BL = 2.8 mm), co-occurring with holotype of I. harrietae in sample TS11-R-N1. Sampling characteristics and environmental data as for this holotype.
Diagnosis. Pereonite 1 with anterolateral pedestal setae. Pereonite 5 and pleotelson with dorsal pedestal setae. Pereopod I carpus wide (length/width ratio = 1.7). Distal margin of pleopod II with simple setae in adult females.
Description. Head length 0.5 width. Pereonite 1 width 0.16 BL. Pereonite 4 length 1.1 width. Pereonite 5 length 2.5 width, 0.3 BL. Pleotelson length 1.3 width. Pereonite 1 with 1 small pair of anterolateral pedestal setae. Pereonite 5 with 10 pairs of dorsal pedestal setae. Pleotelson with 6 pairs of dorsal pedestal setae.
Maxilliped with 2 receptaculi on basal endite. Palp narrower and shorter than basal endite, articles 1–3 expanded, wider than long, with numerous simple setae, article 2 wider than article 1 and 3, articles 4 and 5 longer than wide. Epipod without spines.
Pereopod I weakly carposubchelate. Ischium with 1 posterior robust seta. Merus with 1 posterior robust seta. Carpus with short fringe of fine setae interspersed with 2 posterior robust seta and 11 robust flagellate setae. Carpus with 2 anterior simple setae. Propodus with 4 posterior simple setae and 5 anterior simple setae. Dactylus with 4 simple setae.
Pleopod II (operculum) with narrow proximal neck, laterally convex, broadening posteriorly to rounded corners, posterior margin concave, with 4 simple distal setae (no plumose setae).
Remarks. This preparatory female is the sole representative of this species collected from the surveys listed. Although it has distinctive pedestal setae present on pereonites 1 and 5, it lacks the dorsal and lateral pedestal setae on the other pereonites as observed in I. harrietae. Further material is required for a full description.
description: Published as part of Kavanagh, Fiona A., Frutos, Inmaculada & Sorbe, Jean Claude, 2015, Ischnomesus harrietae sp. nov., a new benthic asellote (Crustacea: Isopoda: Ischnomesidae) from bathyal bottoms of the southern Bay of Biscay, pp. 201-217 in Zootaxa 3911 (2) on page 210, DOI: 10.11646/zootaxa.3911.2.3, http://zenodo.org/record/237906
Design and Flight Demonstration of a Quadrotor for Urban Mapping and Target Tracking Research
Creators: name: Hague, Collin
name: Kakavitsas, Nick
name: Zhang, Jincheng
name: Beam, Chris
name: Willis, Andrew
name: Wolek, Artur
Publisher: name: arXiv
Year: 2024
Subjects: subject: Robotics (cs.RO)
subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Systems and Control (eess.SY)
subject: FOS: Computer and information sciences
subject: FOS: Electrical engineering, electronic engineering, information engineering

description: This paper describes the hardware design and flight demonstration of a small quadrotor with imaging sensors for urban mapping, hazard avoidance, and target tracking research. The vehicle is equipped with five cameras, including two pairs of fisheye stereo cameras that enable a nearly omnidirectional view and a two-axis gimbaled camera. An onboard NVIDIA Jetson Orin Nano computer running the Robot Operating System software is used for data collection. An autonomous tracking behavior was implemented to coordinate the motion of the quadrotor and gimbaled camera to track a moving GPS coordinate. The data collection system was demonstrated through a flight test that tracked a moving GPS-tagged vehicle through a series of roads and parking lots. A map of the environment was reconstructed from the collected images using the Direct Sparse Odometry (DSO) algorithm. The performance of the quadrotor was also characterized by acoustic noise, communication range, battery voltage in hover, and maximum speed tests.
description: 7 pages, 10 figures, To be presented at IEEE SoutheastCon 2024
Additional file 2: Figure S2. of A tissue-specific protein purification approach in Caenorhabditis elegans identifies novel interaction partners of DLG-1/Discs large
Creators: name: Waaijers, Selma
name: MuĂąoz, Javier
name: Berends, Christian
name: JoĂŁo Ramalho
name: Soenita Goerdayal
name: Teck Low
name: Adja Zoumaro-Djayoon
name: Hoffmann, Michael
name: Koorman, Thijs
name: Tas, Roderick
name: Harterink, Martin
name: Seelk, Stefanie
name: Kerver, Jana
name: Hoogenraad, Casper
name: Bossinger, Olaf
name: Baris Tursun
name: Heuvel, Sander Van Den
name: Heck, Albert
name: Boxem, Mike
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: DNA sequence of the C-terminal GTA tag. Relevant regions are highlighted in color. (PDF 88 kb)
A$^3$COSMOS and A$^3$GOODSS: Continuum Source Catalogues and Multi-band Number Counts
Creators: name: Adscheid, Sylvia
name: Magnelli, Benjamin
name: Liu, Daizhong
name: Bertoldi, Frank
name: Delvecchio, Ivan
name: Gruppioni, Carlotta
name: Schinnerer, Eva
name: Traina, Alberto
name: Béthermin, Matthieu
name: Gkogkou, Athanasia
Publisher: name: arXiv
Year: 2024
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: Galaxy submillimetre number counts are a fundamental measurement in our understanding of galaxy evolution models. Most early measurements are obtained via single-dish telescopes with substantial source confusion, whereas recent interferometric observations are limited to small areas. We used a large database of ALMA continuum observations to accurately measure galaxy number counts in multiple (sub)millimetre bands, thus bridging the flux density range between single-dish surveys and deep interferometric studies. We continued the Automated Mining of the ALMA Archive in the COSMOS Field project (A$^3$COSMOS) and extended it with observations from the GOODS-South field (A$^3$GOODSS). The database consists of ~4,000 pipeline-processed continuum images from the public ALMA archive, yielding 2,050 unique detected sources. To infer galaxy number counts, we constructed a method to reduce the observational bias inherent to targeted pointings that dominate the database. This method comprises a combination of image selection, masking, and source weighting. The effective area was calculated by accounting for inhomogeneous wavelengths, sensitivities, and resolutions and for spatial overlap between images. We tested and calibrated our method with simulations. We derived the number counts in a consistent and homogeneous way in four different ALMA bands covering a relatively large area. The results are consistent with number counts from the literature within the uncertainties. In Band 7, at the depth of the inferred number counts, ~40% of the cosmic infrared background is resolved into discrete sources. This fraction, however, decreases with wavelength, reaching ~4% in Band 3. Finally, we used the number counts to test models of dusty galaxy evolution, and find a good agreement within the uncertainties.
description: Published in A&A, 27 pages, 14 figures. Updated to match published version (added missing reference, updated Figure 7, minor textual adjustments; results unchanged). Catalogues are available at the CDS, see https://cdsarc.cds.unistra.fr/viz-bin/cat/J/A+A/685/A1 , and on the A$^3$COSMOS website, see https://sites.google.com/view/a3cosmos
Variational Umbrella Seeding for Calculating Nucleation Barriers
Creators: name: Gispen, Willem
name: Espinosa, Jorge R.
name: Sanz, Eduardo
name: Vega, Carlos
name: Dijkstra, Marjolein
Publisher: name: arXiv
Year: 2024
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: In this work, we introduce Variational Umbrella Seeding, a novel technique for computing nucleation barriers. This new method, a refinement of the original seeding approach, is far less sensitive to the choice of order parameter for measuring the size of a nucleus. Consequently, it surpasses seeding in accuracy, and Umbrella Sampling in computational speed. We test the method extensively and demonstrate excellent accuracy for crystal nucleation of nearly hard spheres and of two distinct models of water: mW and TIP4P/ICE. This method can easily be extended to calculate nucleation barriers for homogeneous melting, condensation, and cavitation.
Additional file 2: Figure S2. of Identification and functional analysis of the geranylgeranyl pyrophosphate synthase gene (crtE) and phytoene synthase gene (crtB) for carotenoid biosynthesis in Euglena gracilis
Creators: name: Kato, Shota
name: Takaichi, Shinichi
name: Ishikawa, Takahiro
name: Asahina, Masashi
name: Senji Takahashi
name: Shinomura, Tomoko
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Plant Biology
subject: 60506 Virology

description: Nucleotide sequence of E. gracilis crtB and its deduced amino acid sequence. (PDF 1130 kb)
Additional file 8: Figure S5.  of A tissue-specific protein purification approach in Caenorhabditis elegans identifies novel interaction partners of DLG-1/Discs large
Creators: name: Waaijers, Selma
name: MuĂąoz, Javier
name: Berends, Christian
name: JoĂŁo Ramalho
name: Soenita Goerdayal
name: Teck Low
name: Adja Zoumaro-Djayoon
name: Hoffmann, Michael
name: Koorman, Thijs
name: Tas, Roderick
name: Harterink, Martin
name: Seelk, Stefanie
name: Kerver, Jana
name: Hoogenraad, Casper
name: Bossinger, Olaf
name: Baris Tursun
name: Heuvel, Sander Van Den
name: Heck, Albert
name: Boxem, Mike
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology

description: a Phylogenetic tree of MAP1-related proteins. Proteins were identified through iterative HMMER searches as implemented in JackHMMER. Three major groups containing the human MAP1A, MAP1B, and MAP1S proteins are color coded. b Sequence alignment of MAPH-1.1 with human MAP1A. (PDF 231 kb)
Additional file 4: Figure S4. of Identification and functional analysis of the geranylgeranyl pyrophosphate synthase gene (crtE) and phytoene synthase gene (crtB) for carotenoid biosynthesis in Euglena gracilis
Creators: name: Kato, Shota
name: Takaichi, Shinichi
name: Ishikawa, Takahiro
name: Asahina, Masashi
name: Senji Takahashi
name: Shinomura, Tomoko
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Plant Biology

description: Phylogenetic relationships of the deduced EgCrtB amino acid sequence and known phytoene synthases. Numbers in parentheses are accession numbers of phytoene synthases. The phylogenetic tree was constructed with the neighbor-joining method using MEGA version 6.0 [59]. Bootstrap values from the percentages of 1000 replications are indicated beside each node. (PDF 988 kb)
Additional file 1: of Pharmacological regimens for eradication of Helicobacter pylori: an overview of systematic reviews and network meta-analysis
Creators: name: Yiqiao Xin
name: Manson, Jan
name: Govan, Lindsay
name: Harbour, Robin
name: Bennison, Jenny
name: Watson, Eleanor
name: Wu, Olivia
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Pharmacology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Search strategy. (DOCX 13Â kb)
Additional file 3: Figure S3. of Identification and functional analysis of the geranylgeranyl pyrophosphate synthase gene (crtE) and phytoene synthase gene (crtB) for carotenoid biosynthesis in Euglena gracilis
Creators: name: Kato, Shota
name: Takaichi, Shinichi
name: Ishikawa, Takahiro
name: Asahina, Masashi
name: Senji Takahashi
name: Shinomura, Tomoko
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Plant Biology

description: Phylogenetic relationships of the deduced EgCrtE amino acid sequence and known GGPP synthases. Numbers in parentheses are accession numbers of GGPP synthases. Sequence data for GGPS of Pyropia umbilicalis [P_umbilicalis_esContig5139] was obtained from NoriBLAST [58]. The phylogenetic tree was constructed with the neighbor-joining method using MEGA version 6.0 [59]. Bootstrap values from the percentages of 1000 replications are indicated beside each node. (PDF 972 kb)
Sylvenomyia fennica Penttinen & Jaschhof, 2009, sp. n.
Creators: name: Penttinen, Jouni
name: Jaschhof, Mathias
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Cecidomyiidae
Sylvenomyia
Sylvenomyia fennica

description: Sylvenomyia fennica sp. n.
(Figs 1 A, 2)
Diagnosis. Males of Sylvenomyia fennica differ from males of Sylvenomyia spinigera, which is a closely similar species, as follows. The hair-shaped translucent sensilla on the antennal flagellum are shorter and fewer. CuA1 is never traceable. The ventral emargination of the gonocoxites is deep-V-shaped (Fig. 2B). The gonostylus is more elongate and less curved; the apical claw is more slender (Fig. 2B). The ejaculatory apodeme bears apically a very large membranous extension (Fig. 2D). The ventrolateral tegmen margins have a scaly surface that in some specimens is more distinctive than in others (Fig. 2D).
Distribution and phenology. Sylvenomyia fennica is apparently widespread throughout Finland and, according to our records, penetrates northwards to 67° N. Adults were collected exclusively in stands of oldgrowth taiga between late June and late August. Most of the specimens were caught by sweepnet, a few others by Malaise trap. Larvae are unknown.
Etymology. The species epithet refers to the distribution range as currently known.
Types. Holotype. Male, Finland, Ok, Kuhmo, Kieverrysjärvet, 63.46N / 29.53E, in mixed taiga (spruce, pine, birch), 17 July 2004, by sweepnet, M. Jaschhof. Paratypes. 1 male, same data as the holotype; 1 male, Finland, Ob, Pudasjärvi, Syöte National Park, 65.46N / 27.44E, in mixed taiga (spruce, aspen, birch), 22 July 2004, by sweepnet, M. Jaschhof. The type material of the new species is deposited in the Zoological Museum, University of Helsinki, Finland.
Further material. Finland: 1 male, St, Ikaalinen, Seitseminen National Park, Multiharju, 61.54N / 23.25E, 2 July–24 Aug. 2004, M. & C. Jaschhof; 2 males, Ta, Tammela, Liesjärvi National Park, 60.39N / 23.54E, 26 June–29 Aug. 2004, M. & C. Jaschhof; 1 male, Tb, Saarijärvi, Pyhä-Häkki National Park, E Poikaaho farm, 62.51N / 25.26E, 4 July–22 Aug. 2004, M. & C. Jaschhof; 1 male, Kb, Lieksa, Jongunjoki Nature Reserve, 3 km S Telio, 63.44N / 29.51E, 18 July 2004, M. Jaschhof; 1 male, same data as the holotype; 3 males, Ok, Kuhmo, Elimyssalo Nature Reserve, S Viiksimo, 64.14N / 30.23E, 18/ 19 July 2004, M. Jaschhof; 1 male, Lk, Kittilä, Pallas-Yllästunturi National Park, S Linkukero, 67.44N / 24.21E, 17/ 18 July 2005, M. Jaschhof.
description: Published as part of Penttinen, Jouni & Jaschhof, Mathias, 2009, On the systematics of Sylvenomyia Mamaev & Zaitzev (Diptera, Cecidomyiidae, " Porricondylinae "), with the description of a new species from Finland, pp. 48-54 in Zootaxa 2032 on pages 52-53, DOI: 10.5281/zenodo.186299
title:  Space Junk
Creators: name: Dolan, Bridget Megan
Publisher: name: Old Dominion University
publisherIdentifier: https://ror.org/04zjtrb98
publisherIdentifierScheme: ROR
Year: 2024

description: Space Junk is a collection of poems that is exploring the relationship between different spaces as well as the act of looking. Additionally, this work aims to create a bridge between the arts and sciences, looking for ways in which the two can exist in harmony. This thesis uses poetry in a variety of forms, often prose poems, and has multiple threads of family, grief, out space itself, and the inner self. By moving through the family space, to the outer space, to the inner space, this work mimics gravitational lensing in the way it curves, but comes back around to the beginning path.
Possible $Σ_c^* \barΣ$ molecular states
Creators: name: Wu, Bing
name: Dong, Xiang-Kun
name: Guo, Feng-Kun
name: Zou, Bing-Song
Publisher: name: arXiv
Year: 2024
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We investigate the possibility of deuteron-like $Σ_c^*\barΣ$ bound states within the one-boson-exchange model and systematically analyze the effects of the contact-range $δ^{3}(\vec{r}\,)$ potential, the tensor term from the vector-meson exchange, and nonlocal potentials due to the dependence on the sum of the initial and final state center-of-mass momenta. We find that the pion-exchange potential including the $δ^{3}(\vec{r}\,)$ term and the tensor term of the $ρ$-exchange potential exhibit comparable magnitudes but opposite signs for any $S$-wave baryon-antibaryon systems. For the $Σ_c^*\barΣ$ system, it is most likely to form bound states with mass around 3.7 GeV in the $I(J^P)=0(2^-)$ and $1(2^-)$ channels.
description: 22 pages, 11 figures
Additional file 5: Figure S5. of Identification and functional analysis of the geranylgeranyl pyrophosphate synthase gene (crtE) and phytoene synthase gene (crtB) for carotenoid biosynthesis in Euglena gracilis
Creators: name: Kato, Shota
name: Takaichi, Shinichi
name: Ishikawa, Takahiro
name: Asahina, Masashi
name: Senji Takahashi
name: Shinomura, Tomoko
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: Plant Biology
subject: 60506 Virology

description: Analysis of phytoene production in E. coli by HPLC. HPLC chromatogram (284 nm) of extracts from E. coli cells carrying (A) pET-EgcrtE, (B) pET-EgcrtB, (C) pAC-PacrtB with pETDuet-1 (vector control), and (D) pACCRT-E [23] with pETDuet-1. Data are representative of three or four experiments with similar results. Phytoene was eluted at 28.6 min (Fig.Â 4). The peak at 21.5 min was not carotenoid. (PDF 1108 kb)
Additional file 3: of Association between parental socioeconomic status with underweight and obesity in children from two Spanish birth cohorts: a changing relationship
Creators: name: Martínez-Vizcaíno, Vicente
name: Solera-Martínez, Montserrat
name: Cavero-Redondo, Iván
name: García-Prieto, Jorge
name: Arias-Palencia, Natalia
name: Notario-Pacheco, Blanca
name: Martínez-Andrés, Maria
name: Mota, Jorge
name: Mairena Sánchez-López
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Marine Biology
subject: Cancer
subject: Science Policy

description: Differences in weight status by parental socio-economic status, controlling for age, by sex. (DOC 46 kb)
Additional file 2: of How do medical specialists value their own intercultural communication behaviour? A reflective practice study
Creators: name: E. Paternotte
name: F. Scheele
name: T. Van Rossum
name: M. Seeleman
name: A. Scherpbier
name: A. Van Dulmen
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Appendix B. Overview of patient characteristics per interviewee. (DOCX 80Â kb)
Additional file 1: of Association between parental socioeconomic status with underweight and obesity in children from two Spanish birth cohorts: a changing relationship
Creators: name: Martínez-Vizcaíno, Vicente
name: Solera-Martínez, Montserrat
name: Cavero-Redondo, Iván
name: García-Prieto, Jorge
name: Arias-Palencia, Natalia
name: Notario-Pacheco, Blanca
name: Martínez-Andrés, Maria
name: Mota, Jorge
name: Mairena Sánchez-López
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Science Policy

description: Differences in weight status by parental socio-economic status, controlling for age in the study, by birth cohort. (DOC 34 kb)
Additional file 1: of Teaser: Individualized benchmarking and optimization of read mapping results for NGS data
Creators: name: Smolka, Moritz
name: Rescheneder, Philipp
name: Schatz, Michael
name: Haeseler, Arndt Von
name: Sedlazeck, Fritz
Publisher: name: Figshare
Year: 2015
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Computational Biology

description: Detailed results shown in the Figures. In addition, it describes the report that is generated by Teaser. (DOCX 1789 kb)
title: Environmental Control in Appalachia: Politics of the Red River Gorge Dam Controversy, 1962-1975
Creators: name: Cook, Kamil
Publisher: name: Rice University
publisherIdentifier: https://ror.org/008zs3103
publisherIdentifierScheme: ROR
Year: 2022

description: In 1962, Congress approved the building of a dam on the Red River in Eastern Kentucky because of recurring floods affecting Powell County, Kentucky. This dam threatened a beautiful and ecologically unique part of the Red River, and, in response, in 1967 a group of environmental activists gathered together to challenge the building of this dam. After a contracted battle involving the Army Corps of Engineers, environmental activists, politicians, and local people, the dam was never built. Along with chronicling this controversy, my thesis explores the changing conceptions of the environment through the 1960s and 1970s and illustrates that Appalachian environmental activism not only existed, but was contemporary with national movements. I do this with the support of newspapers, letters, legal records, bureaucratic reports and more gathered from the Red River Gorge archive at the University of Kentucky and an online newspaper database.
Scolopendromorpha Pocock 1895
Creators: name: Chagas-Junior, Amazonas
name: Edgecombe, Gregory D.
name: Minelli, Alessandro
Publisher: name: Zenodo
Year: 2008
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Chilopoda
Scolopendromorpha

description: Order Scolopendromorpha Pocock, 1895
Diagnosis: Epimorpha with 21, 23, 39 or 43 leg-bearing trunk segments. Eye a cluster of four ocelli, single ocellus or absent. Antenna with 17–34 (usually 17–21) articles. Single tergite covers maxillipede and first legbearing trunk segments. Trunk heterotergy slight, distinct in at least anterior segments. Four laminae of mandible intersect at cruciform suture. Curled appendages along inner margin of telopodite of first maxilla. Tarsus of second maxilla with dorsal brush. Single row of bullet-shaped sensilla at border between labral and clypeal parts of epipharynx. Foregut relatively long, differentiated into crop and gizzard. Muscles attach to dorsal and ventral sides of spiracular pouches. Genital segments retracted above ultimate sternite. Gonopods lacking in female and usually in males, the latter with genital appendage on first genital segment in some species of a few genera. Left ejaculatory duct rudimentary or absent. Spermatophore bean-shaped, with multilayered wall.
Remarks: In light of the discovery of previously unknown variability in trunk segmentation in Scolopendromorpha, the order is rediagnosed with emphasis on strictly autapomorphic characters.
description: Published as part of Chagas-Junior, Amazonas, Edgecombe, Gregory D. & Minelli, Alessandro, 2008, Variability in trunk segmentation in the centipede order Scolopendromorpha: a remarkable new species of Scolopendropsis Brandt (Chilopoda: Scolopendridae) from Brazil, pp. 36-46 in Zootaxa 1888 on page 39, DOI: 10.5281/zenodo.184289
Microscopic modeling of attention-based movement behaviors
Creators: name: Li, Danrui
name: Schwartz, Mathew
name: Sohn, Samuel S.
name: Yoon, Sejong
name: Pavlovic, Vladimir
name: Kapadia, Mubbasir
Publisher: name: arXiv
Year: 2024
Subjects: subject: Physics and Society (physics.soc-ph)
subject: FOS: Physical sciences

description: For transportation hubs, leveraging pedestrian flows for commercial activities presents an effective strategy for funding maintenance and infrastructure improvements. However, this introduces new challenges, as consumer behaviors can disrupt pedestrian flow and efficiency. To optimize both retail potential and pedestrian efficiency, careful strategic planning in store layout and facility dimensions was done by expert judgement due to the complexity in pedestrian dynamics in the retail areas of transportation hubs. This paper introduces an attention-based movement model to simulate these dynamics. By simulating retail potential of an area through the duration of visual attention it receives, and pedestrian efficiency via speed loss in pedestrian walking behaviors, the study further explores how design features can influence the retail potential and pedestrian efficiency in a bi-directional corridor inside a transportation hub. Project webpage: https://danruili.github.io/AttentionMove
description: 27 pages, 13 figures, 6 tables. Published in Transportation Research Part C. For the project webpage, see https://danruili.github.io/AttentionMove/
Additional file 1: Table S1. of Variation in the ribosome interacting loop of the Sec61Îą from Giardia lamblia
Creators: name: Abhishek Sinha
name: Atrayee Ray
name: Sandipan Ganguly
name: Dastidar, Shubhra Ghosh
name: Srimonti Sarkar
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Identity percentage values between different Sec61Îą orthologues. (DOCX 74 kb)
Scolopendropsis Brandt 1841
Creators: name: Chagas-Junior, Amazonas
name: Edgecombe, Gregory D.
name: Minelli, Alessandro
Publisher: name: Zenodo
Year: 2008
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Chilopoda
Scolopendromorpha
Scolopendridae
Scolopendropsis

description: Genus Scolopendropsis Brandt, 1841
Type species: Scolopendra bahiensis (Brandt, 1841), by monotypy.
description: Published as part of Chagas-Junior, Amazonas, Edgecombe, Gregory D. & Minelli, Alessandro, 2008, Variability in trunk segmentation in the centipede order Scolopendromorpha: a remarkable new species of Scolopendropsis Brandt (Chilopoda: Scolopendridae) from Brazil, pp. 36-46 in Zootaxa 1888 on page 39, DOI: 10.5281/zenodo.184289
MOESM9 of DNA microarray of global transcription factor mutant reveals membrane-related proteins involved in n-butanol tolerance in Escherichia coli
Creators: name: Si, Hai-Ming
name: Zhang, Fa
name: Wu, An-Ning
name: Han, Rui-Zhi
name: Guo-Chao Xu
name: Ni, Ye
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Additional file 9: Table S4. Pyruvate and fumarate levels in cell cultures of gcl and glcF overexpression strains with or without butanol.
Romance famoso, en que se refieren las grandes hazañas del valiente Negro en Flandes: Digital Edition
Creators: name: Jacsont Pauline
Publisher: name: Zenodo
Year: 2022
Subjects: Spanish literature
Digital edition
XML-TEI

description: Digital edition of a Spanish pliego de cordel (19th c.). It contains the XML-TEI file of the edition, as well as the files that led to this edition, i.e. the digital facsimiles (raw and retouched), and the transcription produced by the OCR tool e-Scriptorium (ALTO-XML). This digital edition is a part of the research project Desenrollando el cordel / Untangling the cordel / Démêler le cordel (2020-2024), led by the professor Constance Carta at the University of Geneva and supported by the philanthropic Sandoz-Monique de Meuron Family Foundation.
Romance famoso, en que se refieren las grandes hazañas del valiente Negro en Flandes: Digital Edition
Creators: name: Jacsont Pauline
Publisher: name: Zenodo
Year: 2024
Subjects: Spanish literature
Digital edition
XML-TEI

description: Digital edition of a Spanish pliego de cordel (19th c.). It contains the XML-TEI file of the edition, as well as the files that led to this edition, i.e. the digital facsimiles (raw and retouched), and the transcription produced by the OCR tool eScriptorium (ALTO-XML). This digital edition is a part of the research project Desenrollando el cordel / Untangling the cordel / Démêler le cordel (2020-2024), led by professor Constance Carta at the University of Geneva and supported by the philanthropic Sandoz-Monique de Meuron Family Foundation.
Gamification in pharmacy education: What we did and learned in our pilot project
Creators: name: Ho, Certina
name: Wei, Wei
name: Ezekwemba, Victoria
name: Chen, Autumn Qiu Hua
name: Garg, Ananya
name: Lau, Stephanie
name: Ma, Eulaine
Publisher: name: F1000 Research Limited
Year: 2024

description: We identified several user experience (UX) elements for designing engaging games, and patient safety topics that may benefit from knowledge reinforcement. Our Safety Games attained positive reaction/satisfaction and learning/knowledge reinforcement in learners. Our pilot project was a successful proof of concept in using gamification in pharmacy education. This pilot project provided us with an opportunity to identify challenging topics in teaching and learning of patient safety, implement gamification in pharmacy education, and confirm the user engagement and knowledge retention potential of gamification in health profession education.
A Multiscale Fracture Model using Peridynamic Enrichment of Finite Elements within an Adaptive Partition of Unity: Experimental Validation
Creators: name: Birner, Matthias
name: Diehl, Patrick
name: Lipton, Robert
name: Schweitzer, Marc Alexander
Publisher: name: arXiv
Year: 2024
Subjects: subject: Computational Engineering, Finance, and Science (cs.CE)
subject: FOS: Computer and information sciences

description: Partition of unity methods (PUM) are of domain decomposition type and provide the opportunity for multiscale and multiphysics numerical modeling. Within the PUM global-local enrichment scheme [1, 2] different physical models can exist to capture multiscale behavior. For instance, we consider classical linear elasticity globally and local zones where fractures occur. The elastic fields of the undamaged media provide appropriate boundary data for local PD simulations on a subdomain containing the crack tip to grow the crack path. Once the updated crack path is found, the elastic field in the body and surrounding the crack is updated using PUM basis with appropriate enrichment near the crack. The subdomain for the PD simulation is chosen to include the current crack tip as well as nearby features that will influence crack growth. This paper is part II of this series and validates the combined PD/PUM simulator against the experimental results presented in [3]. The presented results show that we can attain good agreement between experimental and simulation data with a local PD subdomain that is moving with the crack tip and adaptively chosen size.
Additional file 1: of Discovery of variant infectious salmon anaemia virus (ISAV) of European genotype in British Columbia, Canada
Creators: name: Kibenge, Molly
name: Iwamoto, Tokinori
name: Yingwei Wang
name: Morton, Alexandra
name: Routledge, Richard
name: Kibenge, Frederick
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Hematology
subject: Plant Biology
subject: 60506 Virology

description: Correlation of mean Ct value with conventional RT-PCR with ISAV segment 8 and HPR primers on cell culture virus. Table showing Correlation of mean C t value with conventional RT-PCR with ISAV segment 8 and HPR primers on cell culture virus. (DOC 33 kb)
Additional file 3: of Comparative analysis of microRNA expression in mouse and human brown adipose tissue
Creators: name: GĂźller, Isabelle
name: McNaughton, Sarah
name: Tamsyn Crowley
name: Gilsanz, Vicente
name: Kajimura, Shingo
name: Watt, Matthew
name: Russell, Aaron
Publisher: name: Figshare
Year: 2015
Subjects: subject: Space Science
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Hematology

description: Table of the 35 mouse BAT-enriched miRNAs and their predicted gene targets involved in cellular growth, proliferation and differentiation. (PDF 447 kb)
Additional file 1: Table S1. of High rate of complete responses to immune checkpoint inhibitors in patients with relapsed or refractory Hodgkin lymphoma previously exposed to epigenetic therapy
Creators: name: Falchi, Lorenzo
name: Sawas, Ahmed
name: Changchun Deng
name: Amengual, Jennifer
name: Colbourn, Donald
name: Lichtenstein, Emily
name: Khan, Karen
name: Schwartz, Lawrence
name: OâConnor, Owen
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Characteristics of the patients included in the present report and the studies from Ansell and colleagues and Armand and colleagues. (DOCX 90Â kb)