cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Shrunken pore syndrome in heart transplantation: a pore ready to close?
Creators: name: Herou, Erik
name: Mörtsell, Emilie
name: Grubb, Anders
name: Nozohoor, Shahab
name: Zindovic, Igor
name: Ederoth, Per
name: Dardashti, Alain
name: Bjursten, Henrik
Publisher: name: Taylor & Francis
Year: 2025
Subjects: subject: Medicine
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Science Policy

description: Background: A newly discovered renal syndrome, shrunken pore syndrome (SPS), has been shown to increase mortality regardless of renal function. SPS is defined as an estimated glomerular filtration rate (eGFR) of cystatin C ≤ 60% than eGFRcreatinine. We set out to study SPS in relation to the survival of heart transplantation patients with a follow-up of up to 12 years. Methods. This was a single-center cohort study including 253 consecutive patients undergoing heart transplantation. The prevalence of SPS at different time points post-transplantation and its effect on survival was evaluated using Kaplan–Meier’s analysis and multivariable Cox proportional hazards regression. Results. The prevalence of SPS was 7.5% the day after transplantation (D1), which rose to 71% week 4 after surgery. There was no difference in survival for patients with SPS D1 compared to patients without SPS D1. Patients with SPS 4 weeks compared to patients without SPS 4 weeks after transplantation showed a 5- and 10-year survival of 73% vs. 93% (p = .02) and 63% vs. 90% (p = .005), respectively. SPS developed during the postoperative period was also found to be an independent predictor of mortality (HR 4.65; 95% CI 1.36–15.8). Discussion. SPS that developed in the postoperative course after heart transplantation was found to be an independent predictor of mortality with a severe negative impact on 5- and 10-year survival.
Supplemental Material, Find_Out_Stage_3 - Find Out A New Method to Study Abductive Reasoning in Empirical Research
Creators: name: Żelechowska, Dorota
name: Żyluk, Natalia
name: Urbański, Mariusz
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: 111099 Nursing not elsewhere classified
subject: 160807 Sociological Methodology and Research Methods
subject: FOS: Sociology

description: Supplemental Material, Find_Out_Stage_3 for Find Out A New Method to Study Abductive Reasoning in Empirical Research by Dorota Żelechowska, Natalia Żyluk and Mariusz Urbański in International Journal of Qualitative Methods
Tissue-specific effects of exercise as NAD+-boosting strategy: current knowledge and future perspectives
Creators: name: Walzik, David
name: Jonas, Wiebke
name: Joisten, Niklas
name: Belen, Sergen
name: Wüst, Rob C. I.
name: Guillemin, Gilles
name: Zimmer, Philipp
Publisher: name: TU Dortmund
Year: 2023
Subjects: subject: exercise
subject: health
subject: metabolism
subject: NAD+
subject: NADH
subject: nicotinamide adenine dinucleotide
subject: 796
subject: Training
subject: Metabolismus

description: Nicotinamide adenine dinucleotide (NAD+) is an evolutionarily highly conserved coenzyme with multi-faceted cell functions, including energy metabolism, molecular signaling processes, epigenetic regulation, and DNA repair. Since the discovery that lower NAD+ levels are a shared characteristic of various diseases and aging per se, several NAD+-boosting strategies have emerged. Other than pharmacological and nutritional approaches, exercise is thought to restore NAD+ homeostasis through metabolic adaption to chronically recurring states of increased energy demand. In this review we discuss the impact of acute exercise and exercise training on tissue-specific NAD+ metabolism of rodents and humans to highlight the potential value as NAD+-boosting strategy. By interconnecting results from different investigations, we aim to draw attention to tissue-specific alterations in NAD+ metabolism and the associated implications for whole-body NAD+ homeostasis. Acute exercise led to profound alterations of intracellular NAD+ metabolism in various investigations, with the magnitude and direction of changes being strongly dependent on the applied exercise modality, cell type, and investigated animal model or human population. Exercise training elevated NAD+ levels and NAD+ metabolism enzymes in various tissues. Based on these results, we discuss molecular mechanisms that might connect acute exercise-induced disruptions of NAD+/NADH homeostasis to chronic exercise adaptions in NAD+ metabolism. Taking this hypothesis-driven approach, we hope to inspire future research on the molecular mechanisms of exercise as NAD+-modifying lifestyle intervention, thereby elucidating the potential therapeutic value in NAD+-related pathologies.
description: Acta physiologica; 237(3)
Generative AI and Process Systems Engineering: The Next Frontier
Creators: name: Decardi-Nelson, Benjamin
name: Alshehri, Abdulelah S.
name: Ajagekar, Akshay
name: You, Fengqi
Publisher: name: arXiv
Year: 2024
Subjects: subject: Machine Learning (cs.LG)
subject: Artificial Intelligence (cs.AI)
subject: Systems and Control (eess.SY)
subject: Optimization and Control (math.OC)
subject: FOS: Computer and information sciences
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: FOS: Mathematics

description: This article explores how emerging generative artificial intelligence (GenAI) models, such as large language models (LLMs), can enhance solution methodologies within process systems engineering (PSE). These cutting-edge GenAI models, particularly foundation models (FMs), which are pre-trained on extensive, general-purpose datasets, offer versatile adaptability for a broad range of tasks, including responding to queries, image generation, and complex decision-making. Given the close relationship between advancements in PSE and developments in computing and systems technologies, exploring the synergy between GenAI and PSE is essential. We begin our discussion with a compact overview of both classic and emerging GenAI models, including FMs, and then dive into their applications within key PSE domains: synthesis and design, optimization and integration, and process monitoring and control. In each domain, we explore how GenAI models could potentially advance PSE methodologies, providing insights and prospects for each area. Furthermore, the article identifies and discusses potential challenges in fully leveraging GenAI within PSE, including multiscale modeling, data requirements, evaluation metrics and benchmarks, and trust and safety, thereby deepening the discourse on effective GenAI integration into systems analysis, design, optimization, operations, monitoring, and control. This paper provides a guide for future research focused on the applications of emerging GenAI in PSE.
Microsecond timescale conformational dynamics of a small‐molecule ligand within the active site of a protein
Creators: name: Kotschy, Julia
name: Söldner, Benedikt
name: Singh, Himanshu
name: Vasa, Suresh K.
name: Linser, Rasmus
Publisher: name: TU Dortmund
Year: 2023
Subjects: subject: Ligand entropy
subject: Protein complexes
subject: Protein dynamics
subject: Proton detection
subject: Solid-state NMR
subject: 540

description: The possible internal dynamics of non-isotope-labeled small-molecule ligands inside a target protein is inherently difficult to capture. Whereas high crystallographic temperature factors can denote either static disorder or motion, even moieties with very low B-factors can be subject to vivid motion between symmetry-related sites. Here we report the experimental identification of internal μs timescale dynamics of a high-affinity, natural-abundance ligand tightly bound to the enzyme human carbonic anhydrase II (hCAII) even within a crystalline lattice. The rotamer jumps of the ligand's benzene group manifest themselves both, in solution and fast magic-angle spinning solid-state NMR 1H R1ρ relaxation dispersion, for which we obtain further mechanistic insights from molecular-dynamics (MD) simulations. The experimental confirmation of rotameric jumps in bound ligands within proteins in solution or the crystalline state may improve understanding of host-guest interactions in biology and supra-molecular chemistry and may facilitate medicinal chemistry for future drug campaigns.
description: Angewandte Chemie / International edition; 63(5)
Phase-resolved measurement of entangled states via common-path interferometry
Creators: name: Voitiv, Andrew A.
name: Lusk, Mark T.
name: Siemens, Mark E.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Quantum Physics (quant-ph)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: We propose and experimentally demonstrate a method to directly measure the phase of biphoton states using an entangled mode as a collinear reference. The technique is demonstrated with entangled photonic spatial modes in the Laguerre-Gaussian basis, and it is applicable to any pure quantum system containing an exploitable reference state in its entanglement spectrum. As one particularly useful application, we use the new methodology to directly measure the geometric phase accumulation of entangled photons.
Supplemental Material, Revised_CJP_AUD_Manuscript_Oct_31_2019.docx-clean - Clinical Epidemiology of Alcohol Use Disorders in Military Personnel versus the General Population in Canada: Épidémiologie clinique des troubles liés à la consommation d’alcool chez les militaires par opposition à la population générale du Canada
Creators: name: Taillieu, Tamara L.
name: Afifi, Tracie O.
name: Zamorski, Mark A.
name: Turner, Sarah
name: Kristene Cheung
name: Stein, Murray B.
name: Jitender Sareen
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: 110319 Psychiatry (incl. Psychotherapy)
subject: FOS: Clinical medicine

description: Supplemental Material, Revised_CJP_AUD_Manuscript_Oct_31_2019.docx-clean for Clinical Epidemiology of Alcohol Use Disorders in Military Personnel versus the General Population in Canada: Épidémiologie clinique des troubles liés à la consommation d’alcool chez les militaires par opposition à la population générale du Canada by Tamara L. Taillieu, Tracie O. Afifi, Mark A. Zamorski, Sarah Turner, Kristene Cheung, Murray B. Stein and Jitender Sareen in The Canadian Journal of Psychiatry
Supplemental Material, Sumplemental_material - Nice Guys Finish Last? The Effect of Lay Theories on Prosocial Actors’ Motivation and Future Benefits
Creators: name: Zhang, Yue
name: Xuhai Chen
name: Zaijia Liu
name: Yuzhuo Zhang
name: Jiang, Tong
name: Xuqun You
name: Yangmei Luo
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology

description: Supplemental Material, Sumplemental_material for Nice Guys Finish Last? The Effect of Lay Theories on Prosocial Actors’ Motivation and Future Benefits by Yue Zhang, Xuhai Chen, Zaijia Liu, Yuzhuo Zhang, Tong Jiang, Xuqun You and Yangmei Luo in Social Psychological and Personality Science
Additional file 1 of Efficacy and safety of antibiotics for treatment of leptospirosis: a systematic review and network meta-analysis
Creators: name: Ji, Zhenhua
name: Jian, Miaomiao
name: Su, Xuan
name: Pan, Yingyi
name: Duan, Yi
name: Ma, Weijie
name: Zhong, Lei
name: Yang, Jiaru
name: Song, Jieqin
name: Wu, Xinya
name: Gao, Li
name: Ma, Weijiang
name: Kong, Jing
name: Li, Bingxue
name: Chen, Jinjing
name: Liu, Meixiao
name: Fan, Yuxin
name: Peng, Li
name: Dong, Yan
name: Bao, Fukai
name: Liu, Aihua
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences

description: Supplementary Material 1.
An Adaptive Interactive Routing-Packing Strategy for Split Delivery Vehicle Routing Problem with 3D Constraints: Supplementary Material
Creators: name: Zhang, Han
name: Li, Qing
name: Yao, Xin
Publisher: name: Zenodo
Year: 2024

description: Supplementary material of our paper 'An Adaptive Interactive Routing-Packing Strategy for Split Delivery Vehicle Routing Problem with 3D Constraints', accepted by GECCO'24.
Multiderivative time integration methods preserving nonlinear functionals via relaxation
Creators: name: Ranocha, Hendrik
name: Schütz, Jochen
Publisher: name: arXiv
Year: 2023
Subjects: subject: Numerical Analysis (math.NA)
subject: FOS: Mathematics
subject: 65L06, 65M20, 65M70

description: We combine the recent relaxation approach with multiderivative Runge-Kutta methods to preserve conservation or dissipation of entropy functionals for ordinary and partial differential equations. Relaxation methods are minor modifications of explicit and implicit schemes, requiring only the solution of a single scalar equation per time step in addition to the baseline scheme. We demonstrate the robustness of the resulting methods for a range of test problems including the 3D compressible Euler equations. In particular, we point out improved error growth rates for certain entropy-conservative problems including nonlinear dispersive wave equations.
Area-metric gravity revisited
Creators: name: Borissova, Johanna N.
name: Dittrich, Bianca
name: Krasnov, Kirill
Publisher: name: arXiv
Year: 2023
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Area metrics are an intriguing generalization of length metrics which appears in several quantum-gravity approaches. We describe the space of diffeomorphism-invariant area-metric actions quadratic in fluctuations and derivatives. A general theory is found to be specified by four parameters, two of which are mass parameters for the non-length degrees of freedom. We find that a two-parameter subclass of theories exhibits an additional shift symmetry of the kinetic term, and leads to a ghost-free graviton propagator for the effective theory obtained after integrating out the non-length degrees of freedom. One of the two parameters determines the strength of parity violations, the other defines a mass parameter for the non-length degrees of freedom. The same type of action has been found to appear from modified Plebanski theory and in the continuum limit of (effective) spin foams.
 We moreover find that area-metric actions in Lorentzian (but not in Euclidean) signature feature wrong-sign kinetic and mass terms for the non-length degrees of freedom. Nevertheless, despite a coupling of these degrees of freedom to the length metric, the linearized dynamics turns out to be stable for the above subclass of actions.
description: v1: 22 pages; v2: minor modifications, content matches version published in PRD
Additional file 12 of Whole genome-scale assessment of gene fitness of Novosphingobium aromaticavorans during spaceflight
Creators: name: Sharma, Gayatri
name: Zee, Peter C.
name: Zea, Luis
name: Curtis, Patrick D.
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Supplementary Material 12
Photoinduced metallic Volkov-Pankratov states in semi-Dirac material
Creators: name: Islam, SK Firoz
Publisher: name: arXiv
Year: 2023
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We study the emergence of interfacial modes between the two regions of a semi-Dirac type material, which are illuminated by the left and right circularly polarized light, respectively. We show that a smooth boundary between the two regions give rise to an interfacial quantum well which is sensitive to the incoming electron's momentum. The quantum well is found to host the Volkov-Pankratov states which are gapless metallic in nature. Contrary to the inverted mass term, it is the inverted velocity term that induces such states across the boundary. We also note that incident electron can fully pass over the interfacial well without any reflection only at certain light parameters-known as {\it Ramsauer-Townsend} effect. Moreover, we also observe that such modes can even exist across the interface between the irradiated and non-irradiated regions under certain condition.
description: This is published version
Supplemental Material2 - Supplemental material for Rehabilitation with a stabilizing exercise program in triangular fibrocartilage complex lesions with distal radioulnar joint instability: A pilot intervention study
Creators: name: EDJ Bonhof-Jansen
name: GJ Kroon
name: SM Brink
name: JH Van Uchelen
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: 110314 Orthopaedics
subject: FOS: Clinical medicine
subject: 110604 Sports Medicine

description: Supplemental material, Supplemental Material2 for Rehabilitation with a stabilizing exercise program in triangular fibrocartilage complex lesions with distal radioulnar joint instability: A pilot intervention study by EDJ Bonhof-Jansen, GJ Kroon, SM Brink and JH van Uchelen in Hand Therapy
Thermal conductivity of Li$_3$PS$_4$ solid electrolytes with ab initio accuracy
Creators: name: Tisi, Davide
name: Grasselli, Federico
name: Gigli, Lorenzo
name: Ceriotti, Michele
Publisher: name: arXiv
Year: 2024
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The vast amount of computational studies on electrical conduction in solid-state electrolytes is not mirrored by comparable efforts addressing thermal conduction, which has been scarcely investigated despite its relevance to thermal management and (over)heating of batteries. The reason for this lies in the complexity of the calculations: on one hand, the diffusion of ionic charge carriers makes lattice methods formally unsuitable, due to the lack of equilibrium atomic positions needed for normal-mode expansion. On the other hand, the prohibitive cost of large-scale molecular dynamics (MD) simulations of heat transport in large systems at ab initio levels has hindered the use of MD-based methods. In this paper, we leverage recently developed machine-learning potentials targeting different ab initio functionals (PBEsol, r$^2$SCAN, PBE0) and a state-of-the-art formulation of the Green-Kubo theory of heat transport in multicomponent systems to compute the thermal conductivity of a promising solid-state electrolyte, Li$_3$PS$_4$, in all its polymorphs ($α$, $β$, and $γ$). By comparing MD estimates with lattice methods on the low-temperature, nondiffusive $γ$-Li$_3$PS$_4$, we highlight strong anharmonicities and negligible nuclear quantum effects, hence further justifying MD-based methods even for nondiffusive phases. Finally, for the ion-conducting $α$ and $β$ phases, where the multicomponent Green-Kubo MD approach is mandatory, our simulations indicate a weak temperature dependence of the thermal conductivity, a glass-like behavior due to the effective local disorder characterizing these Li-diffusing phases.
description: 11 pages, 5 figures
Supplemental Material1 - Supplemental material for Rare genetic variants in patients with cervical artery dissection
Creators: name: Traenka, Christopher
name: Kloss, Manja
name: Strom, Tim
name: Lyrer, Philippe
name: Brandt, Tobias
name: Bonati, Leo H
name: Grond-Ginsbach, Caspar
name: Engelter, Stefan
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: Cardiology
subject: Medicine
subject: 110904 Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine

description: Supplemental material, Supplemental Material1 for Rare genetic variants in patients with cervical artery dissection by Christopher Traenka, Manja Kloss, Tim Strom, Philippe Lyrer, Tobias Brandt, Leo H Bonati, Caspar Grond-Ginsbach and Stefan Engelter in European Stroke Journal
Total_arrest_Scan_J_Surg_Suppl – Supplemental material for Noninvasive Neuromonitoring of Hypothermic Circulatory Arrest in Aortic Surgery
Creators: name: J. A. Stewart
name: M. O. K. Särkelä
name: T. Salmi
name: J. Wennervirta
name: A. P. Vakkuri
name: T. L. S. Vainikka
name: R. Suojaranta
name: K. Mäki
name: V. H. Ilkka
name: H. Viertiö-Oja
name: U.-S. Salminen
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 110323 Surgery
subject: FOS: Clinical medicine

description: Supplemental material, Total_arrest_Scan_J_Surg_Suppl for Noninvasive Neuromonitoring of Hypothermic Circulatory Arrest in Aortic Surgery by J. A. Stewart, M. O. K. Särkelä, T. Salmi, J. Wennervirta, A. P. Vakkuri, T. L. S. Vainikka, R. Suojaranta, K. Mäki, V. H. Ilkka, H. Viertiö-Oja and U.-S. Salminen in Scandinavian Journal of Surgery
On the Feasibility of Deep Learning Classification from Raw Signal Data in Radiology, Ultrasonography and Electrophysiology
Creators: name: Enyedi, Szilard
Publisher: name: arXiv
Year: 2024
Subjects: subject: Systems and Control (eess.SY)
subject: Neural and Evolutionary Computing (cs.NE)
subject: Quantitative Methods (q-bio.QM)
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: FOS: Computer and information sciences
subject: FOS: Biological sciences

description: Medical imaging is a very useful tool in healthcare, various technologies being employed to non-invasively peek inside the human body. Deep learning with neural networks in radiology was welcome - albeit cautiously - by the radiologist community. Most of the currently deployed or researched deep learning solutions are applied on already generated images of medical scans, use the neural networks to aid in the generation of such images, or use them for identifying specific substance markers in spectrographs. This paper's author posits that if the neural networks were trained directly on the raw signals from the scanning machines, they would gain access to more nuanced information than from the already processed images, hence the training - and later, the inferences - would become more accurate. The paper presents the main current applications of deep learning in radiography, ultrasonography, and electrophysiology, and discusses whether the proposed neural network training directly on raw signals is feasible.
description: Updated 2024.04.14 17:49+3: accepted to the conference, so added IEEE copyright notice to the first page, as per "IEEE Publication Services and Products Board Operations Manual 2024"'s subsection 8.1.9. point D. 6 pages, 5 figures, 1 table, 56 references, submitted to AQTR 2024
Appendix – Supplemental material for Smart Growth at the Ballot Box: Understanding Voting on Affordable Housing and Land Management Referendums
Creators: name: Pearson-Merkowitz, Shanna
name: Lang, Corey
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 160607 International Relations
subject: FOS: Political science
subject: 120599 Urban and Regional Planning not elsewhere classified
subject: FOS: Social and economic geography

description: Supplemental material, Appendix for Smart Growth at the Ballot Box: Understanding Voting on Affordable Housing and Land Management Referendums by Shanna Pearson-Merkowitz and Corey Lang in Urban Affairs Review
Additional file 19 of Whole genome-scale assessment of gene fitness of Novosphingobium aromaticavorans during spaceflight
Creators: name: Sharma, Gayatri
name: Zee, Peter C.
name: Zea, Luis
name: Curtis, Patrick D.
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Supplementary Material 19
Impact of Schumann resonances on the Einstein Telescope and projections for the magnetic coupling function
Creators: name: Janssens, Kamiel
name: Martinovic, Katarina
name: Christensen, Nelson
name: Meyers, Patrick M.
name: Sakellariadou, Mairi
Publisher: name: arXiv
Year: 2021
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: Correlated magnetic noise in the form of Schumann resonances could introduce limitations to the gravitational-wave background searches of future Earth-based gravitational-wave detectors. We consider recorded magnetic activity at a candidate site for the Einstein Telescope, and forecast the necessary measures to ensure that magnetic contamination will not pose a threat to the science goals of this third-generation detector. In addition to global magnetic effects, we study local magnetic noise and the impact it might have on co-located interferometers. We express our results as upper limits on the coupling function of magnetic fields to the interferometer arms, implying that any larger values of magnetic coupling into the strain channel would lead to a reduction in the detectors' sensitivity. For gravitational-wave background searches below $\sim 30$ Hz it will be necessary for the Einstein Telescope magnetic isolation coupling to be two to four orders of magnitude better than that measured in the current Advanced LIGO and Virgo detectors.
description: May 30th 2022 - New version contains updated figures in agreement with erratum: https://doi.org/10.1103/PhysRevD.105.109904
Additional file 1 of Financial stress, health and malnourishment among older adults in India
Creators: name: Banerjee, Kajori
name: Sahoo, Harihar
name: Govil, Dipti
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Science Policy
subject: Mental Health

description: Supplementary Material 1
Fingerprints of anti-Pfaffian topological order in quantum point contact transport
Creators: name: Park, Jinhong
name: Spånslätt, Christian
name: Mirlin, Alexander D.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Despite recent experimental developments, the topological order of the fractional quantum Hall state at filling $ν=5/2$ remains an outstanding question. We study conductance and shot noise in a quantum point contact device in the charge-equilibrated regime and show that, among Pfaffian, particle-hole Praffian, and anti-Pfaffian (aPf) candidate states, the hole-conjugate aPf state is unique in that it can produce a conductance plateau at $G=(7/3)e^2/h$ by two fundamentally distinct mechanisms. We demonstrate that these mechanisms can be distinguished by shot noise measurements on the plateaus. We also determine distinct features of the conductance of the aPf state in the coherent regime. Our results can be used to experimentally single out the aPf order.
description: 7 pages main text (4 figures), 12 pages supplementary (4 figures)
Re-Envisioning Numerical Information Field Theory (NIFTy.re): A Library for Gaussian Processes and Variational Inference
Creators: name: Edenhofer, Gordian
name: Frank, Philipp
name: Roth, Jakob
name: Leike, Reimar H.
name: Guerdi, Massin
name: Scheel-Platz, Lukas I.
name: Guardiani, Matteo
name: Eberle, Vincent
name: Westerkamp, Margret
name: Enßlin, Torsten A.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: Machine Learning (cs.LG)
subject: Machine Learning (stat.ML)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: Imaging is the process of transforming noisy, incomplete data into a space that humans can interpret. NIFTy is a Bayesian framework for imaging and has already successfully been applied to many fields in astrophysics. Previous design decisions held the performance and the development of methods in NIFTy back. We present a rewrite of NIFTy, coined NIFTy.re, which reworks the modeling principle, extends the inference strategies, and outsources much of the heavy lifting to JAX. The rewrite dramatically accelerates models written in NIFTy, lays the foundation for new types of inference machineries, improves maintainability, and enables interoperability between NIFTy and the JAX machine learning ecosystem.
description: 10 pages, 2 figures, published in Journal of Open Source Software (JOSS)
Additional file 1 of Cerebellar connectome alterations and associated genetic signatures in multiple sclerosis and neuromyelitis optica spectrum disorder
Creators: name: Yang, Yuping
name: Li, Junle
name: Li, Ting
name: Li, Zhen
name: Zhuo, Zhizheng
name: Han, Xuemei
name: Duan, Yunyun
name: Cao, Guanmei
name: Zheng, Fenglian
name: Tian, Decai
name: Wang, Xinli
name: Zhang, Xinghu
name: Li, Kuncheng
name: Zhou, Fuqing
name: Huang, Muhua
name: Li, Yuxin
name: Li, Haiqing
name: Li, Yongmei
name: Zeng, Chun
name: Zhang, Ningnannan
name: Sun, Jie
name: Yu, Chunshui
name: Shi, Fudong
name: Asgher, Umer
name: Muhlert, Nils
name: Liu, Yaou
name: Wang, Jinhui
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1: Supplementary Methods. Supplementary Results. Supplementary Discussion. Figure S1. Illustrative representation of cerebellar lobules. Figure S2. The stability of cerebellar modular architecture over different combinations of inter-layer connectivity strength ( $$\upomega$$ ω ) and module resolution ( $$\upgamma$$ γ ). Figure S3. Alterations in cerebellar module-based cortical thickness. Figure S4. Relationships between cerebellar module-based cortical thickness and disease duration, lesion volume and EDSS in MS. Table S1. The number of participants included in each site. Table S2. The number of participants that completed the neuropsychological tests. Table S3. Key imaging parameters in each site. Table S4. Group differences of MRI-based measures. Table S5. Go biological processes associated with the gene sets explaining variance of the cerebellar functional alterations in MS and NMOSD.
Pairing properties of an odd-frequency superfluid Fermi gas
Creators: name: Iwasaki, Shumpei
name: Kawamura, Taira
name: Manabe, Koki
name: Ohashi, Yoji
Publisher: name: arXiv
Year: 2024
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: FOS: Physical sciences

description: We theoretically investigate strong-coupling properties of an odd-frequency Fermi superfluid. This pairing state has the unique property that Cooper pairs are formed between fermions, not at the same time, but at different times. To see whether or not such unequal-time pairs still exhibit bosonic behavior, we examine the space-time structure of the odd-frequency Cooper-pair wavefunction at $T=0$, by employing the combined path-integral formalism with the BCS-Eagles-Leggett-type superfluid theory. In the strong-coupling regime, the odd-frequency pair wavefunction still has different space-time structure from that in the ordinary even-frequency $s$-wave superfluid state, their $\textit{magnitudes}$ are found to become close to each other, except for the equal-time pairing component. In this regime, we also evaluate the superfluid phase transition temperature $T_{\rm c}$ within the framework of the strong-coupling theory developed by Nozières and Schmitt-Rink. The calculated $T_{\rm c}$ in the strong-coupling regime of the odd-frequency system is found to be well described by the Bose-Einstein condensation of tightly bound Bose molecules. Our results indicates that, in spite of vanishing equal-time pairing, odd-frequency Cooper pairs still behave like bosons in the strong-coupling regime, as in the even-frequency $s$-wave superfluid case.
description: 16 pages, 11 figures
Algebraic homotopy classes
Creators: name: Banecki, Juliusz
Publisher: name: arXiv
Year: 2024
Subjects: subject: Algebraic Geometry (math.AG)
subject: FOS: Mathematics
subject: 14P05, 14P25

description: We prove several positive results regarding representation of homotopy classes of spheres and algebraic groups by regular mappings. Most importantly we show that every mapping from a sphere to an orthogonal or a unitary group is homotopic to a regular one. Furthermore we prove that algebraic homotopy classes of spheres form a subgroup of the homotopy group, and that a similar result holds also for cohomotopy groups of arbitrary varieties.
Additional file 1 of Novel likely pathogenic variant in the EYA1 gene causing Branchio oto renal syndrome and the exploration of pathogenic mechanisms
Creators: name: Zhang, Hui
name: Gao, Jian
name: Wang, Hanjun
name: Liu, Mengli
name: Lu, Shuangshuang
name: Xu, Hongen
name: Tang, Wenxue
name: Zheng, Guoxi
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Supplementary Material 1
Supplemental Material, Search_screenshot - Is Exercise a Useful Intervention in the Treatment of Alcohol Use Disorder? Systematic Review and Meta-Analysis
Creators: name: Gür, Fatih
name: Ganime Can Gür
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111799 Public Health and Health Services not elsewhere classified
subject: FOS: Health sciences

description: Supplemental Material, Search_screenshot for Is Exercise a Useful Intervention in the Treatment of Alcohol Use Disorder? Systematic Review and Meta-Analysis by Fatih GÜR and Ganime CAN GÜR in American Journal of Health Promotion
Supplementary_table_2_Characteristics_of_local_advanced_left_colon_cancer_after_PSM – Supplemental material for The main contributor to the upswing of survival in locally advanced colorectal cancer: an analysis of the SEER database
Creators: name: Li, Yuqiang
name: Zhao, Lilan
name: Güngör, Cenap
name: Tan, Fengbo
name: Zhou, Zhongyi
name: Li, Chenglong
name: Song, Xiangping
name: Wang, Dan
name: Pei, Qian
name: Liu, Wenxue
Publisher: name: SAGE Journals
Year: 2019
Subjects: Nutrition and Dietetics not elsewhere classified
Oncology and Carcinogenesis not elsewhere classified
Pharmacology and Pharmaceutical Sciences not elsewhere classified

description: Supplemental material, Supplementary_table_2_Characteristics_of_local_advanced_left_colon_cancer_after_PSM for The main contributor to the upswing of survival in locally advanced colorectal cancer: an analysis of the SEER database by Yuqiang Li, Lilan Zhao, Cenap Güngör, Fengbo Tan, Zhongyi Zhou, Chenglong Li, Xiangping Song, Dan Wang, Qian Pei and Wenxue Liu in Therapeutic Advances in Gastroenterology
Supplementary_table_3_Characteristics_of_local_advanced_rectal_cancer_after_PSM – Supplemental material for The main contributor to the upswing of survival in locally advanced colorectal cancer: an analysis of the SEER database
Creators: name: Li, Yuqiang
name: Zhao, Lilan
name: Güngör, Cenap
name: Tan, Fengbo
name: Zhou, Zhongyi
name: Li, Chenglong
name: Song, Xiangping
name: Wang, Dan
name: Pei, Qian
name: Liu, Wenxue
Publisher: name: SAGE Journals
Year: 2019
Subjects: Nutrition and Dietetics not elsewhere classified
Oncology and Carcinogenesis not elsewhere classified
Pharmacology and Pharmaceutical Sciences not elsewhere classified

description: Supplemental material, Supplementary_table_3_Characteristics_of_local_advanced_rectal_cancer_after_PSM for The main contributor to the upswing of survival in locally advanced colorectal cancer: an analysis of the SEER database by Yuqiang Li, Lilan Zhao, Cenap Güngör, Fengbo Tan, Zhongyi Zhou, Chenglong Li, Xiangping Song, Dan Wang, Qian Pei and Wenxue Liu in Therapeutic Advances in Gastroenterology
Wilson_-_supplementary_-_figures_and_tables – Supplemental material for Improved dendroclimatic calibration using blue intensity in the southern Yukon
Creators: name: R Wilson
name: K Anchukaitis
name: L Andreu-Hayles
name: E Cook
name: R D’Arrigo
name: N Davi
name: L Haberbauer
name: P Krusic
name: B Luckman
name: D Morimoto
name: R Oelkers
name: G Wiles
name: C Wood
Publisher: name: SAGE Journals
Year: 2019
Subjects: Geography
History

description: Supplemental material, Wilson_-_supplementary_-_figures_and_tables for Improved dendroclimatic calibration using blue intensity in the southern Yukon by R Wilson, K Anchukaitis, L Andreu-Hayles, E Cook, R D’Arrigo, N Davi, L Haberbauer, P Krusic, B Luckman, D Morimoto, R Oelkers, G Wiles and C Wood in The Holocene
Additional file 1 of Development of a person-centred care approach for persons with chronic multimorbidity in general practice by means of participatory action research
Creators: name: Bogerd, Mieke JL
name: Slottje, Pauline
name: Bont, Jettie
name: Van Hout, Hein PJ
Publisher: name: figshare
Year: 2024
Subjects: Biological Sciences not elsewhere classified
Cancer
Science Policy
Computational Biology

description: Supplementary Material 1.
Implementation of tunable frequency-dependent stiffness elements via integrated shunted piezoelectric stacks
Creators: name: Van Damme, Bart
name: Weber, Rico
name: Schmied, Jascha U
name: Spierings, Adriaan
name: Bergamini, Andrea
Publisher: name: arXiv
Year: 2024
Subjects: subject: Applied Physics (physics.app-ph)
subject: FOS: Physical sciences

description: Piezoelectric transducers applied on or integrated in structures, combined with appropriate circuits have been extensively investigated as a smart approach to the mitigation of resonant vibrations with high relative amplitudes. \cmt{A resonant shunt circuit consisting of the capacitive piezoelectric transducer and an inductance can be configured to target specific eigenmodes of a structure, if appropriately placed and tuned. Their effect is expressed in terms of mechanical impedance of the host structure, allowing for the exchange of energy between the mechanical and electrical domain, to dramatically affect the dynamic response of the structure. By re-framing the function of resonant shunted piezoelectric transducers as frequency dependent variable stiffness elements, this paper investigates their capability to realize a frequency dependent structural mechanical connectivity, where the load path within a lattice structure can be interrupted at will for specific frequencies by tunable null-stiffness components. Here, we offer the numerical and experimental verification of this idea, by demonstrating the ability to significantly affect the dynamic response of a unit cell of an adaptive lattice metamaterial, even away from a structural resonance. In the latter case, the null-stiffness shunt leads to an additional resonance peak in the truss' dynamic response.} Its realization as additively manufactured component points to the feasibility of such structures in real life.
Additional file 3 of What incentives encourage local communities to collect and upload mosquito sound data by using smartphones? A mixed methods study in Tanzania
Creators: name: Dam, Rinita
name: Mponzi, Winifrida
name: Msaky, Dickson
name: Mwandyala, Tumpe
name: Kaindoa, Emmanuel W.
name: Sinka, Marianne E.
name: Kiskin, Ivan
name: Herreros-Moya, Eva
name: Messina, Janey
name: Shah, Syed Ghulam Sarwar
name: Roberts, Stephen
name: Willis, Kathy J.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Neuroscience
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 3: Demographic questionnaire. Do incentives improve local community collection of mosquito sound data using smartphones. Two case studies in Tanzania and the Democratic Republic of Congo. Demographic Questionnaire.
Supplementary_Methods – Supplemental material for Pilot study of bevacizumab in combination with docetaxel and cyclophosphamide as adjuvant treatment for patients with early stage HER-2 negative breast cancer, including analysis of candidate circulating markers of cardiac toxicity: ICORG 08–10 trial
Creators: name: Gullo, Giuseppe
name: Eustace, Alex J.
name: Canonici, Alexandra
name: Collins, Denis M.
name: Kennedy, Michael J.
name: Grogan, Liam
name: Breathhnach, Oscar
name: McCaffrey, John
name: Maccon Keane
name: Martin, Michael J.
name: Rajnish Gupta
name: Leonard, Gregory
name: O’Connor, Miriam
name: Calvert, Paula M.
name: Donnellan, Paul
name: Walshe, Janice
name: McDermott, Enda
name: Scott, Kathleen
name: Hernando, Andres
name: Parker, Imelda
name: Murray, David W.
name: O’Farrell, Alice C.
name: Ashwini Maratha
name: Dicker, Patrick
name: Mairin Rafferty
name: Murphy, Verena
name: O’Donovan, Norma
name: Gallagher, William M.
name: Ky, Bonnie
name: Tryfonopoulos, Dimitrios
name: Moulton, Brian
name: Byrne, Annette T.
name: Crown, John
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 111299 Oncology and Carcinogenesis not elsewhere classified
subject: FOS: Clinical medicine
subject: 111702 Aged Health Care
subject: FOS: Health sciences
subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: 110203 Respiratory Diseases

description: Supplemental material, Supplementary_Methods for Pilot study of bevacizumab in combination with docetaxel and cyclophosphamide as adjuvant treatment for patients with early stage HER-2 negative breast cancer, including analysis of candidate circulating markers of cardiac toxicity: ICORG 08–10 trial by Giuseppe Gullo, Alex J. Eustace, Alexandra Canonici, Denis M. Collins, Michael J. Kennedy, Liam Grogan, Oscar Breathhnach, John McCaffrey, Maccon Keane, Michael J. Martin, Rajnish Gupta, Gregory Leonard, Miriam O’Connor, Paula M. Calvert, Paul Donnellan, Janice Walshe, Enda McDermott, Kathleen Scott, Andres Hernando, Imelda Parker, David W. Murray, Alice C. O’Farrell, Ashwini Maratha, Patrick Dicker, Mairin Rafferty, Verena Murphy, Norma O’Donovan, William M. Gallagher, Bonnie Ky, Dimitrios Tryfonopoulos, Brian Moulton, Annette T. Byrne and John Crown in Therapeutic Advances in Medical Oncology
Boundary Criticality of the 3D O($N$) Model: From Normal to Extraordinary
Creators: name: Toldin, Francesco Parisen
name: Metlitski, Max A.
Publisher: name: arXiv
Year: 2021
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: It was recently realized that the three-dimensional O($N$) model possesses an extraordinary boundary universality class for a finite range of $N \ge 2$. For a given $N$, the existence and universal properties of this class are predicted to be controlled by certain amplitudes of the normal universality class, where one applies an explicit symmetry breaking field to the boundary. In this Letter, we study the normal universality class for $N = 2, 3$ using Monte Carlo simulations on an improved lattice model and extract these universal amplitudes. Our results are in good agreement with direct Monte Carlo studies of the extraordinary universality class serving as a nontrivial quantitative check of the connection between the normal and extraordinary classes.
description: 16 pages, 2 figures, including Supplemental Material; v2: expanded discussion, 19 pages, 2 figures, including Supplemental Material
Additional file 2 of What incentives encourage local communities to collect and upload mosquito sound data by using smartphones? A mixed methods study in Tanzania
Creators: name: Dam, Rinita
name: Mponzi, Winifrida
name: Msaky, Dickson
name: Mwandyala, Tumpe
name: Kaindoa, Emmanuel W.
name: Sinka, Marianne E.
name: Kiskin, Ivan
name: Herreros-Moya, Eva
name: Messina, Janey
name: Shah, Syed Ghulam Sarwar
name: Roberts, Stephen
name: Willis, Kathy J.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Neuroscience
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 2: Topic guide for community members. HumBug: Developing a mosquito monitoring tool for Least Developed Countries – Focus group/interview guide to engage community members in rural Tanzania in Kiswahili.
Additional file 1 of Femtosecond thin-flap laser assisted in situ keratomileusis for correction of post-penetrating keratoplasty ametropia: long-term outcome
Creators: name: Einollahi, Bahram
name: Rezaei, Javad
name: Sadoughi, Mohammad-Mehdi
name: Feizi, Sepehr
name: Einollahi, Neda
name: Veisi, Amir Reza
name: Hassanpour, Kiana
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Neuroscience
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Supplementary Material 1
Supplemental_Table_1 – Supplemental material for Provider Perspectives on Stressors, Support, and Access to Mental Health Care for Latinx Youth
Creators: name: Rodríguez, Erin M.
name: Smith, Lauren
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 111099 Nursing not elsewhere classified
subject: FOS: Health sciences
subject: 111799 Public Health and Health Services not elsewhere classified
subject: 160807 Sociological Methodology and Research Methods
subject: FOS: Sociology

description: Supplemental material, Supplemental_Table_1 for Provider Perspectives on Stressors, Support, and Access to Mental Health Care for Latinx Youth by Erin M. Rodríguez and Lauren Smith in Qualitative Health Research
Gravitational waves in a cyclic Universe: resilience through cycles and vacuum state
Creators: name: De Angelis, Mariaveronica
name: Smith, Adam
name: Giarè, William
name: van de Bruck, Carsten
Publisher: name: arXiv
Year: 2024
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We present a generalised calculation for the spectrum of primordial tensor perturbations in a cyclic Universe, making no assumptions about the vacuum state of the theory and accounting for the contribution of tensor modes produced in the dark energy phase of the previous cycle. We show that these modes have minimal impact on the spectrum observed in the current cycle, except for corrections on scales as large as the comoving Hubble radius today. These corrections are due to sub-horizon modes produced towards the end of the dark energy phase, persisting into the ekpyrotic phase of the next cycle as additional quanta. In relation to the vacuum state, we argue that non-Bunch-Davies quanta can easily overwhelm the energy density driving the dark energy phase, potentially compromising the model. Therefore, avoiding backreaction effects sets restrictive constraints on deviations away from the Bunch-Davies vacuum during this phase, limiting the overall freedom to consider alternative vacua in the cyclic Universe.
description: 26 pages, 2 figures
Additional file 5 of What incentives encourage local communities to collect and upload mosquito sound data by using smartphones? A mixed methods study in Tanzania
Creators: name: Dam, Rinita
name: Mponzi, Winifrida
name: Msaky, Dickson
name: Mwandyala, Tumpe
name: Kaindoa, Emmanuel W.
name: Sinka, Marianne E.
name: Kiskin, Ivan
name: Herreros-Moya, Eva
name: Messina, Janey
name: Shah, Syed Ghulam Sarwar
name: Roberts, Stephen
name: Willis, Kathy J.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Neuroscience
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 5: Research Participant Experience Survey. Do incentives improve local community collection of mosquito sound data using smartphones? Two case studies in Tanzania and the Democratic Republic of Congo. Research Participant Experience Survey.
erhardt_online_supplement_1 - The Janus-Face of Digitalization: The Relation Between Internet Use and Civic Engagement Reconsidered
Creators: name: Erhardt, Julian
name: Freitag, Markus
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: Science Policy
subject: Sociology
subject: FOS: Sociology

description: erhardt_online_supplement_1 for The Janus-Face of Digitalization: The Relation Between Internet Use and Civic Engagement Reconsidered by Julian Erhardt and Markus Freitag in Social Science Computer Review
Additional file 1 of Direct and accurate miRNA detection based on CRISPR/Cas13a-triggered exonuclease-iii-assisted colorimetric assay
Creators: name: Li, Yunxiao
name: Wang, Qiuxia
name: Wang, Yali
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: Cancer
subject: Computational Biology

description: Additional file 1. Table S1. Sequence information of nucleic acid.