cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Lithium abundance and 6Li/7Li ratio in the active giant HD123351 I. A comparative analysis of 3D and 1D NLTE line-profile fits
Creators: name: Mott, A.
name: Steffen, M.
name: Caffau, E.
name: Spada, F.
name: Strassmeier, K. G.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: Current three-dimensional (3D) hydrodynamical model atmospheres together with NLTE spectrum synthesis, permit to derive reliable atomic and isotopic chemical abundances from high-resolution stellar spectra. Not much is known about the presence of the fragile 6Li isotope in evolved solar-metallicity RGB stars, not to mention its production in magnetically active targets like HD123351. From fits of the observed CFHT spectrum with synthetic line profiles based on 1D and 3D model atmospheres, we seek to estimate the abundance of the 6Li isotope and to place constraints on its origin. We derive A(Li) and the 6Li/7Li isotopic ratio by fitting different synthetic spectra to the Li-line region of a high-resolution CFHT spectrum (R=120 000, S/R=400). The synthetic spectra are computed with four different line lists, using in parallel 3D hydrodynamical CO5BOLD and 1D LHD model atmospheres and treating the line formation of the lithium components in non-LTE (NLTE). We find A(Li)=1.69+/-0.11 dex and 6Li/7Li=8.0+/-4.4 % in 3D-NLTE, using the line list of Meléndez et al. (2012), updated with new atomic data for V I, which results in the best fit of the lithium line profile of HD123351. Two other line lists lead to similar results but with inferior fit qualities. Our 2-sigma detection of the 6Li isotope is the result of a careful statistical analysis and the visual inspection of each achieved fit. Since the presence of a significant amount of 6Li in the atmosphere of a cool evolved star is not expected in the framework of standard stellar evolution theory, non-standard, external lithium production mechanisms, possibly related to stellar activity or a recent accretion of rocky material, need to be invoked to explain the detection of 6Li in HD123351.
description: 16 pages, 11 figures. Accepted for publication in A&A
Fieldwork Manual Template
Creators: name: Fiddicke, Ulrike
name: Pack, L. Kim
Publisher: name: Zenodo
Year: 2018
Subjects: HBM study
fieldwork manual
template
fieldwork
Human Biomonitoring
HBM
HBM4EU
study material

description: The Fieldwork Manual Template aims to deliver a handbook or template for the creation of a structured composition of the documents most important to a (HBM) study. The template essentially provides examples of the content of such a handbook that collates both an in-depth description of the planned study as well as all information necessary for conducting the fieldwork, such as master copies, checklists and questionnaires.
 This document is also included as an annex in HBM4EU Deliverable D7.3.
description: This Fieldwork Manual Template is based on and interconnected with the work done for Deliverable 7.3 and its Annex 1, the Concept for a Study Protocol. We would like to thank all authors mentioned in those documents for their input. This document has been created for the HBM4EU project. HBM4EU has received funding from the European Union's Horizon 2020 research and innovation programme under grant agreement No 733032. This document was originally an annex to a HBM4EU project deliverable. This annex is here provided also as a single file for easier use and accessibility.
Effect of castration regimen on health, performance, and inflammation in beef cattle
Creators: name: Powell, J. G.
name: Roberts, S. L.
name: Hughes, H. D.
name: Richeson, J. T.
Publisher: name: American Association of Bovine Practitioners  Proceedings of the Annual Conference
Year: 2014

description: Castration is a common management procedure for bull calves, and it is routinely performed without analgesia. In the US, there is no approved medication for analgesia in cattle. However, meloxicam is an NSAID that is FDA-approved and prescribed for pain relief in other species, such as companion animals, but its use in food producing animals is extra-label. The study objective was to determine the effects of castration method (surgical vs banding) at feedlot arrival and efficacy of meloxicam administered concurrent to castration compared to a negative control (calves castrated near birth).
description: American Association of Bovine Practitioners Proceedings of the Annual Conference, 2014
Additional file 1: of Unusual presentation of plasmablastic lymphoma involving ovarian mature cystic teratoma: a case report
Creators: name: Hadžisejdić, Ita
name: Babarović, Emina
name: Vranić, Luka
name: Načinović, Antica Duletić
name: Lučin, Ksenija
name: Krašević, Maja
name: Jonjić, Nives
Publisher: name: figshare
Year: 2017
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Developmental Biology
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Timeline table Hadžisejdić et al. case report. (DOC 39 kb)
Bispectral index and hemodynamic effects of a constant rate infusion of propofol combined with fentanyl in calves under spontaneous ventilation
Creators: name: Deschk, M.
name: Trein, T. A.
name: Wagatsuma, J. T.
name: Silva, G. L.
name: Rodrigues, C. A.
name: Santos, P. S. P.
Publisher: name: American Association of Bovine Practitioners  Proceedings of the Annual Conference
Year: 2014

description: Total intravenous anesthesia is an anesthetic modality which is commonly used in cattle due to its practicality, as it eliminates the need for sophisticated equipment and can be used under field conditions, providing adequate anesthesia and analgesia for bovine patients. This study evaluated the bispectral index (BIS) and hemodynamic effects of a constant rate infusion of propofol combined with fentanyl in calves.
description: American Association of Bovine Practitioners Proceedings of the Annual Conference, 2014
Hybrid Transactional Replication: State-Machine and Deferred-Update Replication Combined
Creators: name: Kobus, Tadeusz
name: Kokociński, Maciej
name: Wojciechowski, Paweł T.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Distributed, Parallel, and Cluster Computing (cs.DC)
subject: FOS: Computer and information sciences

description: We propose Hybrid Transactional Replication (HTR), a novel replication scheme for highly dependable services. It combines two schemes: a transaction is executed either optimistically by only one service replica in the deferred update mode (DU), or deterministically by all replicas in the state machine mode (SM); the choice is made by an oracle. The DU mode allows for parallelism and thus takes advantage of multicore hardware. In contrast to DU, the SM mode guarantees abort-free execution, so it is suitable for irrevocable operations and transactions generating high contention. For expressiveness, transactions can be discarded or retried on demand. We formally prove that the higher flexibility of the scheme does not come at the cost of weaker guarantees for clients: HTR satisfies strong consistency guarantees akin to those provided by other popular transactional replication schemes such as Deferred Update Replication. We developed HTR-enabled Paxos STM, an object-based distributed transactional memory system, and evaluated it thoroughly under various workloads. We show the benefits of using a novel oracle, which relies on machine learning techniques for automatic adaptation to changing conditions. In our tests, the ML-based oracle provides up to 50% improvement in throughput when compared to the system running with DU-only or SM-only oracles. Our approach is inspired by a well known algorithm used in the context of the multi-armed bandit problem.
Renormalization of chiral nuclear forces with multiple subtractions in peripheral channels
Creators: name: Batista, E. F.
name: Szpigel, S.
name: Timóteo, V. S.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We analyse the renormalization of the of two-nucleon interaction with multiple subtractions in peripheral waves considering two chiral forces at N3LO. Phase shifts at low energies are then computed with several subtraction points below μ= 10 / fm. We show that for most peripheral waves the phase shifts have nearly no dependence on the renormalization scale. In two cases the phase shifts converge slowly as the renormalization scale approaches μ= 1 / fm and in one case the phase shifts presented oscillations with respect to the subtraction point μ.
description: 21 pages, 12 figures, to appear in the special issue "Few-Body Systems in High Energy Physics" (AHEP)
title: First results of a quantitative study of deep-sea fish on the continental slope of the Bay of Biscay: visual observations and trawling
Creators: name: Trenkel, V. M.
name: Bailly, N.
name: Berthelé, O.
name: Brosseau, O.
name: Causse, R.
name: De Corbière, F.
name: Dugornay, O.
name: Ferrant, A.
name: J.D.M.Gordon
name: Latrouite, D.
name: Le Piver, D.
name: Kergoat, B.
name: Lorance, P.
name: Mahévas, S.
name: Mesnil, B.
name: Poulard, J.-C.
name: Rochet, M.-J.
name: Tracey, D.
name: Vacherot, J.-P.
name: Veron, G.
name: Zibrowius, H.
Publisher: name: ASC 2002 - L - Theme session
Year: 2024
Subjects: Fisheries and aquaculture
Technologies and data

description: No abstracts are to be cited without prior reference to the author.Fish and benthic communities on the continental slopes and in the deep-sea have not received the same attention as those on shelf areas, not least due to their relative inaccessibility. This study, from which initial results are presented, aimed at comparing abundance estimates obtained in three contrasting areas at depths between 1200 and 1500 m in the Bay of Biscay in August 2002 by three methods: visual transects, baited camera and trawling. The study areas differed in terms of substrate type, current conditions and previous exploitation history in order to estimate the impact of these factors on fish density. The use of three different sampling methods gives insights into the relative observability of different species depending on habitat conditions, and contribute to the intercalibration of the three methods. Visual observations along transects using a remotely operated vehicle (Victor 6000) were used to link density estimates to habitat conditions (substrate type and benthic communities), and provide information on species behaviour and small scale habitat preferences. Information on catchability was gleaned from the comparison of species composition in trawls with those from visual observations.
Bell's Inequality and Entanglement in Qubits
Creators: name: Chang, Po-Yao
name: Chu, Su-Kuan
name: Ma, Chen-Te
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Physics (quant-ph)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We propose an alternative evaluation of quantum entanglement by measuring the maximum violation of the Bell's inequality without performing a partial trace operation. This proposal is demonstrated by bridging the maximum violation of the Bell's inequality and the concurrence of a pure state in an $n$-qubit system, in which one subsystem only contains one qubit and the state is a linear combination of two product states. We apply this relation to the ground states of four qubits in the Wen-Plaquette model and show that they are maximally entangled. A topological entanglement entropy of the Wen-Plaquette model could be obtained by relating the upper bound of the maximum violation of the Bell's inequality to the concurrences of a pure state with respect to different bipartitions.
description: 10 pages
Additional file 2: Table S1. of Risk score for first-screening of prevalent undiagnosed chronic kidney disease in Peru: the CRONICAS-CKD risk score
Creators: name: Carrillo-Larco, Rodrigo
name: J. Miranda
name: Gilman, Robert
name: Medina-Lezama, Josefina
name: Chirinos-Pacheco, Julio
name: MuĂąoz-Retamozo, Paola
name: Smeeth, Liam
name: Checkley, William
name: Bernabe-Ortiz, Antonio
Publisher: name: figshare
Year: 2017
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Comparison with other risk scores. (DOCX 14Â kb)
A common origin of magnetism from planets to white dwarfs
Creators: name: Isern, Jordi
name: García-Berro, Enrique
name: Külebi, Baybars
name: Lorén-Aguilar, Pablo
Publisher: name: arXiv
Year: 2017
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: Isolated magnetic white dwarfs have field strengths ranging from kilogauss to gigagauss. However, the origin of the magnetic field has not been hitherto elucidated. Whether these fields are fossil, hence the remnants of original weak magnetic fields amplified during the course of the evolution of their progenitor stars, or are the result of binary interactions or, finally, they are produced by other internal physical mechanisms during the cooling of the white dwarf itself, remains a mystery. At sufficiently low temperatures white dwarfs crystallize. Upon solidification, phase separation of its main constituents, 12C and 16O, and of the impurities left by previous evolution occurs. This process leads to the formation of a Rayleigh-Taylor unstable liquid mantle on top of a solid core. This convective region, as it occurs in Solar System planets like the Earth and Jupiter, can produce a dynamo able to yield magnetic fields of strengths of up to 0.1 MG, thus providing a mechanism that could explain magnetism in single white dwarfs.
description: The Astrophysical Journal Letters, 836:L28 (5pp), 2017 February 20
MOESM3 of d-Î˛-Hydroxybutyrate and melatonin for treatment of porcine hemorrhagic shock and injury: a melatonin dose-ranging study
Creators: name: Wolf, Andrea
name: Mulier, Kristine
name: Sydne Muratore
name: Beilman, Gregory
Publisher: name: figshare
Year: 2017
Subjects: subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology

description: Additional file 3. Urine 8-isoprostane levels during hemorrhagic shock and injury.
Co-administration of meloxicam and gabapentin does not compromise beef bull semen quality
Creators: name: Cain, A. J.
name: Comstock, J. F.
name: King, E. H.
name: Hopper, R. M.
Publisher: name: American Association of Bovine Practitioners  Proceedings of the Annual Conference
Year: 2014

description: Feet and leg soundness are of critical importance for breeding bulls, and lameness is a common problem affecting bulls. Lameness pain in the bovine typically has both inflammatory and neuropathic components, and often coincides with a decline in fertility. As neuropathic pain is refractory to non-steroidal anti-inflammatory drugs (NSAIDs), y-aminobutyric acid (GABA) analogues are commonly used in conjunction with NSAIDs to treat lameness in cattle. Meloxicam, an NSAID, and gabapentin, a GABA analogue, are frequently used extra-label under the supervision of a veterinarian to mitigate pain associated with lameness. Though neither of these compounds is currently labeled for use in bovines in the United States, previous research has indicated that the pharmokinetic profiles of these drugs support further evaluation for clinical use as analgesics in bovines. A decline in fertility is often observed in lame bulls; however, the pathogenesis of this transient subfertility is unknown. Currently, no controlled studies have been conducted to evaluate the effects of meloxicam and gabapentin analgesics on bull fertility. Thus, the objective of the present study was to evaluate the effects of meloxicam and gabapentin combination therapy on beef bull semen quality. It was hypothesized that treatment with meloxicam and gabapentin might have deleterious effects on semen quality.
description: American Association of Bovine Practitioners Proceedings of the Annual Conference, 2014
title: Typology and characterization of European Ecosystem Fisheries Units
Creators: name: Chassot, Emmanuel
name: Gascuel, Didier
name: Laurans, Martial
Publisher: name: ASC 2002 - L - Theme session
Year: 2024
Subjects: Fisheries and aquaculture
Technologies and data

description: No abstracts are to be cited without prior reference to the author.Statistical analyses were carried out in order to define Ecosystem Fisheries Units (EFU) among ICES divisions. The main objective of EFU is to conciliate management areas at an ecosystem scale. In this view, Multiple Correspondence and Factor Analyses on 20 ICES areas for most of the fish stocks reported in the ICES Advisory Committee on Fishery Management (ACFM) were first performed to define potential ecosystem units. Factor analysis on catch data for the most harvested species was also conducted. Hierarchical classifications were then performed to gather areas presenting similar species and stocks compositions and productions. Regrouping ICES areas in a few EFU closer to an ecosystem view permitted to restrict the study to some fisheries units more easily comparable. Ecosystemic indicators are calculated to characterize the EFU: productivity, variability in catches, mean trophic levels of species landed, catches diversity and variability of the Primary Production Required to sustain fisheries. Multivariate analysis on a few indicators was conducted in order to compare the EFU and obtain their typology. Results show significant differences between the predefined units. Some of the EFU are highly productive, stable in the catches and seem to remain quite constant as time goes by. On the other hand, some EFU are showing trends of decrease in the production and in the mean trophic levels of the catches and increase in the diversity of targets. The interest of combining different ecosystem indicators through multivariate analysis and comparing fisheries units among Europe is discussed. Limits of reliability of the available data at this scale of study and pertinence in the choice of the indicators are questioned. Although fisheries history and species targeted can be very different, some EFU seem to show similar trends in regard to the studied indicators. This could be linked to a structure and/or function of the ecosystem that are close. Nevertheless, inference from the fishery to the ecosystem behaviour have to be done with great care.
Fundamental Plane of Black Hole Activity in Quiescent Regime
Creators: name: Xie, Fu-Guo
name: Yuan, Feng
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: A correlation among the radio luminosity ($L_{\rm R}$), X-ray luminosity ($L_{\rm X}$), and black hole mass ($M_{\rm BH}$) in active galactic nuclei (AGNs) and black hole binaries is known to exist and is called the "Fundamental Plane" of black hole activity. Yuan & Cui (2005) predicts that the radio/X-ray correlation index, $ξ_{\rm X}$, changes from $ξ_{\rm X}\approx 0.6$ to $ξ_{\rm X}\approx 1.2-1.3$ when $L_{\rm X}/L_{\rm Edd}$ decreases below a critical value $\sim 10^{-6}$. While many works favor such a change, there are also several works claiming the opposite. In this paper, we gather from literature a largest quiescent AGN (defined as $L_{\rm X}/L_{\rm Edd} < 10^{-6}$) sample to date, consisting of $75$ sources. We find that these quiescent AGNs follow a $ξ_{\rm X}\approx 1.23$ radio/X-ray relationship, in excellent agreement with the Yuan \& Cui prediction. The reason for the discrepancy between the present result and some previous works is that their samples contain not only quiescent sources but also "normal" ones (i.e., $L_{\rm X}/L_{\rm Edd} > 10^{-6}$). In this case, the quiescent sources will mix up with those normal ones in $L_{\rm R}$ and $L_{\rm X}$. The value of $ξ_{\rm X}$ will then be between $0.6$ and $\sim1.3$, with the exact value being determined by the sample composition, i.e., the fraction of the quiescent and normal sources. Based on this result, we propose that a more physical way to study the Fundamental Plane is to replace $L_{\rm R}$ and $L_{\rm X}$ with $L_{\rm R}/L_{\rm Edd}$ and $L_{\rm X}/L_{\rm Edd}$, respectively.
description: 11 pages, 7 figures, accepted for publication in The Astrophysical Journal
Additional file 2: Figure S2. of Intra-tumor heterogeneity in breast cancer has limited impact on transcriptomic-based molecular profiling
Creators: name: Govindasamy-Muralidharan Karthik
name: Rantalainen, Mattias
name: Stålhammar, Gustav
name: Lövrot, John
name: Ullah, Ikram
name: Alkodsi, Amjad
name: Ma, Ran
name: Wedlund, Lena
name: Lindberg, Johan
name: Frisell, Jan
name: Bergh, Jonas
name: Hartman, Johan
Publisher: name: figshare
Year: 2017
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology
subject: Computational Biology

description: Variant allele frequency values for putative driver genes across different regions profiled from (a) patient 15 (b) patient 10 and (c) patient 17. Cellular prevalence values for inferred subclones (clusters) across different regions profiled in (d) patient 5 (e) patient 10 and (f) patient 17. (PDF 1153 kb)
Gap structure of 1D cut and project Hamiltonians
Creators: name: Macé, Nicolas
name: Jagannathan, Anuradha
name: Piéchon, Frédéric
Publisher: name: arXiv
Year: 2017
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: We study the gap properties of nearest neighbors tight binding models on quasiperiodic chains. We argue that two kind of gaps should be distinguished: stable and transient. We show that stable gaps have a well defined quasiperiodic limit. We also show that there is a direct relation between the gap size and the gap label.
description: Issued for the 13th International Conference on Quasicrystals (ICQ13)
Comparison of cardiopulmonary effects of 5 degree reverse Trendelenburg and horizontal positions in dorsally recumbent sevoflurane-anesthetized calves
Creators: name: Araújo, M. J.
name: Deschk, M.
name: Wagatsuma, J. T.
name: Floriano, B. P.
name: Silva, G. L.
name: Santos, P. S. P.
Publisher: name: American Association of Bovine Practitioners  Proceedings of the Annual Conference
Year: 2014

description: The purpose of the study was to compare the cardiopulmonary effects of 5 degree reverse Trendelenburg (“head-up”) to the horizontal position in dorsally recumbent calves anesthetized with sevoflurane.
description: American Association of Bovine Practitioners Proceedings of the Annual Conference, 2014
title: Jacques Leibowitch, "SIDA : une avancée biologique et clinique significative ?"
Creators: name: Leibowitch, Jacques
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020

description: Article et entretien avec Jacques Leibowitch, extrait du Journal de l'avancée médicale, no 162, 1er décembre 1989. Texte imprimé numérisé.
description: Source: http://www.calames.abes.fr/pub/ms/Calames-20193111031798113
title: The Census of Marine Life: Linking the Oceans Past, Present and Future
Creators: name: Dor, R.K. O
name: Decker, C.J.
name: Yarincik, K.
Publisher: name: ASC 2002 - L - Theme session
Year: 2024
Subjects: Fisheries and aquaculture
Technologies and data

description: No abstracts are to be cited without prior reference to the author.The Census of Marine Life: Linking the Oceans Past, Present and Future
Additional file 1: Figure S1. of Risk score for first-screening of prevalent undiagnosed chronic kidney disease in Peru: the CRONICAS-CKD risk score
Creators: name: Carrillo-Larco, Rodrigo
name: J. Miranda
name: Gilman, Robert
name: Medina-Lezama, Josefina
name: Chirinos-Pacheco, Julio
name: MuĂąoz-Retamozo, Paola
name: Smeeth, Liam
name: Checkley, William
name: Bernabe-Ortiz, Antonio
Publisher: name: figshare
Year: 2017
Subjects: subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Marine Biology
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Flow-chart of participants included from the CRONICAS Cohort Study in the development of the risk score. (DOCX 18Â kb)
On-a-chip biosensing based on all-dielectric nanoresonators
Creators: name: Yavas, Ozlem
name: Svedendahl, Mikael
name: Dobosz, Paulina
name: Sanz, Vanesa
name: Quidant, Romain
Publisher: name: arXiv
Year: 2017
Subjects: subject: Applied Physics (physics.app-ph)
subject: FOS: Physical sciences

description: Nanophotonics has become a key enabling technology in biomedicine with great promises in early diagnosis and less invasive therapies. In this context, the unique capability of plasmonic noble metal nanoparticles to concentrate light on the nanometer scale has widely contributed to biosensing and enhanced spectroscopy. Recently, high-refractive index dielectric nanostructures featuring low loss resonances have been proposed as a promising alternative to nanoplasmonics, potentially offering better sensing performances along with full compatibility with the microelectronics industry. In this letter we report the first demonstration of biosensing with silicon nanoresonators integrated in state-of-the-art microfluidics. Our lab-on-a-chip platform enables detecting Prostate Specific Antigen (PSA) cancer marker in human serum with a sensitivity that meets clinical needs. These performances are directly compared with its plasmonic counterpart based on gold nanorods. Our work opens new opportunities in the development of future point-of-care devices towards a more personalized healthcare.
Comparison of 2 gonadorelin formulations and 2 luteolytic agents on pregnancy rates in beef cattle synchronized with a 5-d CO-Synch + CIDR program
Creators: name: Bas, S.
name: Brick, T. A.
name: Starkey, G.
name: Messerschmidt, G.
name: Barragan, A. A.
name: Schuenemann, G. M.
name: Day, M. L.
Publisher: name: American Association of Bovine Practitioners  Proceedings of the Annual Conference
Year: 2014

description: Improving reproductive performance in beef cattle is paramount to maximize beef operations productivity and sustainability. Gonadotropin releasing hormone (GnRH) and luteolytic agents (dinoprost tromethamine and cloprostenol sodium) are commercially available to be used in synchronization programs to allow timed artificial insemination (TAI) of cattle. Recently, a Synchronization Pack™ (Parnell) containing a combination of cloprostenol sodium and gonadorelin acetate was approved by the Food and Drug Administration to be used in TAI synchronization programs in both beef and dairy cattle. However, little research-based evidence on the pregnancy rates that can be achieved in beef cattle using these hormones is available. The objective of the present study was to compare the effect of 2 gonadorelin formulations and 2 luteolytic agents (PGF) injected as part of a 5 day CO-Synch + CIDR program on fixed TAI (FTAI) pregnancy rates (PR) in beef cattle.
description: American Association of Bovine Practitioners Proceedings of the Annual Conference, 2014
Genetic control of plasticity of oil yield for combined abiotic stresses using a joint approach of crop modeling and genome-wide association
Creators: name: Mangin, Brigitte
name: Casadebaig, Pierre
name: Cadic, Eléna
name: Blanchet, Nicolas
name: Boniface, Marie-Claude
name: Carrère, Sébastien
name: Gouzy, Jérôme
name: Legrand, Ludovic
name: Mayjonade, Baptiste
name: Pouilly, Nicolas
name: André, Thierry
name: Coque, Marie
name: Piquemal, Joël
name: Laporte, Marion
name: Vincourt, Patrick
name: Muños, Stéphane
name: Langlade, Nicolas B.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Genomics (q-bio.GN)
subject: FOS: Biological sciences

description: Understanding the genetic basis of phenotypic plasticity is crucial for predicting and managing climate change effects on wild plants and crops. Here, we combined crop modeling and quantitative genetics to study the genetic control of oil yield plasticity for multiple abiotic stresses in sunflower. First we developed stress indicators to characterize 14 environments for three abiotic stresses (cold, drought and nitrogen) using the SUNFLO crop model and phenotypic variations of three commercial varieties. The computed plant stress indicators better explain yield variation than descriptors at the climatic or crop levels. In those environments, we observed oil yield of 317 sunflower hybrids and regressed it with three selected stress indicators. The slopes of cold stress norm reaction were used as plasticity phenotypes in the following genome-wide association study. Among the 65,534 tested SNP, we identified nine QTL controlling oil yield plasticity to cold stress. Associated SNP are localized in genes previously shown to be involved in cold stress responses: oligopeptide transporters, LTP, cystatin, alternative oxidase, or root development. This novel approach opens new perspectives to identify genomic regions involved in genotype-by-environment interaction of a complex traits to multiple stresses in realistic natural or agronomical conditions.
description: 12 pages, 5 figures, Plant, Cell and Environment
The occurrence of flunixin residues in bovine milk samples from the United States
Creators: name: Kissell, L. W.
name: Baynes, R. E.
name: Smith, G. W.
name: Riviere, J. E.
Publisher: name: American Association of Bovine Practitioners  Proceedings of the Annual Conference
Year: 2014

description: Flunixin (FLU) is a non-steroidal anti-inflammatory drug (NSAID) approved in the United States for use in beef and dairy cattle for modulation of inflammation in endotoxemia and for the control of pyrexia associated with bovine respiratory disease and acute bovine mastitis. FLU is labeled for intravenous administration at a dose of 2.2 mg/kg every 24 hours or 0.5 mg/lb (1.1 mg/kg) every 12 hours for up to 3 days. The slaughter withdrawal time is 4 days following the last injection and the milk withdrawal time is 36 hours. Since 2005, the United States Department of Agriculture-Food Safety Inspection Service (USDA-FSIS) has reported an increasing number of residue violations in meat from dairy cattle (USDA-FSIS, 2005-2010). This increase in the number of FLU residue violations has led to FLU becoming the second most common residue violation behind penicillin in cull dairy cattle (USDA-FSIS). In milk the marker residue is a metabolite of FLU, called 5-hydroxy flunixin (50H) and the tolerance for 50H in milk is 2 ppb. Milk samples in the United States are not routinely tested for 50H (National Milk Drug Residue Data Base Fiscal Year 2011 Annual Report). However, due to the significant number of FLU tissue residues violations found in cull dairy cows, there is concern that the same practices which have led to tissue residues may also lead to drug residues in milk.
description: American Association of Bovine Practitioners Proceedings of the Annual Conference, 2014
title: Ecosystem effects of a quickly developed fishery: trends in biomass of demersal resources of Senegal and Guinea
Creators: name: Laurans, Martial
name: Sidibe, Aboubacar
name: Chassot, Emmanuel
name: Gascuel, Didier
Publisher: name: ASC 2002 - L - Theme session
Year: 2024
Subjects: Fisheries and aquaculture
Technologies and data

description: No abstracts are to be cited without prior reference to the author.Fisheries in West Africa have quickly grown during the last decades. From a scientific point of view, this evolution represents a very interesting case study which allows an analysis of ecosystem changes under such growing fisheries. Only biomass trends for Senegal and Guinean demersal resources are considered from commercial statistics as well as scientific data surveys. Time abundance series are estimated since the 70’s using GLM methods, on one hand for a selection of various stocks and on the other hand for total biomass splited into trophic levels and ecological communities. Total biomass has been decreased, the most important decreases were observed for the upper trophic level species and for coastal communities. As a response of species to the fishing pressure, the trophic level is emphasized.
Benefits of intrauterine treatment with cephapirin in dairy cows with endometritis
Creators: name: Tison, N.
name: Bouchard, E.
name: Lefebvre, R. C.
Publisher: name: American Association of Bovine Practitioners  Proceedings of the Annual Conference
Year: 2014

description: Reproductive performance of dairy cows (Sheldon et al, 2006) and farm economic efficiency (Bartlett et al, 1986, Drillich et al, 1994, Guard et al, 1994) are related to the health status of the uterus at the end of the voluntary waiting period. Uterine diseases affect about half of dairy cows in the postpartum period (Klucinski et al, 1990, Leblanc et al, 2008) and cause infertility by disrupting uterine and ovarian functions (William et al, 2005). The hypothesis of the current study was that treatment with antibiotic would improve uterine health and reproductive efficiency in dairy cows with uterine infection. The objective was to assess the efficacy of cephapirin intrauterine treatment preceding a timed Al protocol in lactating cows with purulent vaginal discharge (PVD) and cytological endometritis (CYT).
description: American Association of Bovine Practitioners Proceedings of the Annual Conference, 2014
title: Life history strategies of demersal fishes on the northern Mid-Atlantic Ridge
Creators: name: Clarke, Maurice
name: Hareide, Nils Roar
name: Vinnichenko, Vladimir
name: Duran, Pablo
name: Uiblein, Franz
Publisher: name: ASC 2002 - L - Theme session
Year: 2024
Subjects: Fisheries and aquaculture
Technologies and data

description: No abstracts are to be cited without prior reference to the author.Life history strategies of demersal fishes on the northern Mid-Atlantic Ridge
First test of Verlinde's theory of Emergent Gravity using Weak Gravitational Lensing measurements
Creators: name: Brouwer, Margot M.
name: Visser, Manus R.
name: Dvornik, Andrej
name: Hoekstra, Henk
name: Kuijken, Konrad
name: Valentijn, Edwin A.
name: Bilicki, Maciej
name: Blake, Chris
name: Brough, Sarah
name: Buddelmeijer, Hugo
name: Erben, Thomas
name: Heymans, Catherine
name: Hildebrandt, Hendrik
name: Holwerda, Benne W.
name: Hopkins, Andrew M.
name: Klaes, Dominik
name: Liske, Jochen
name: Loveday, Jon
name: McFarland, John
name: Nakajima, Reiko
name: Sifón, Cristóbal
name: Taylor, Edward N.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Verlinde (2016) proposed that the observed excess gravity in galaxies and clusters is the consequence of Emergent Gravity (EG). In this theory the standard gravitational laws are modified on galactic and larger scales due to the displacement of dark energy by baryonic matter. EG gives an estimate of the excess gravity (described as an apparent dark matter density) in terms of the baryonic mass distribution and the Hubble parameter. In this work we present the first test of EG using weak gravitational lensing, within the regime of validity of the current model. Although there is no direct description of lensing and cosmology in EG yet, we can make a reasonable estimate of the expected lensing signal of low redshift galaxies by assuming a background LambdaCDM cosmology. We measure the (apparent) average surface mass density profiles of 33,613 isolated central galaxies, and compare them to those predicted by EG based on the galaxies' baryonic masses. To this end we employ the ~180 square degrees overlap of the Kilo-Degree Survey (KiDS) with the spectroscopic Galaxy And Mass Assembly (GAMA) survey. We find that the prediction from EG, despite requiring no free parameters, is in good agreement with the observed galaxy-galaxy lensing profiles in four different stellar mass bins. Although this performance is remarkable, this study is only a first step. Further advancements on both the theoretical framework and observational tests of EG are needed before it can be considered a fully developed and solidly tested theory.
description: 14 pages, 3 figures. Accepted for publication in MNRAS. Added references for section 1 and 6
Resilience Hubs and Evacuations: Preparing Edmonton for Extreme Events and Climate Change
Creators: Ciriaco, Thayanne M. G.
Wambura, Veronica
Wong, Stephen D.
Publisher: name: University of Alberta Library
Year: 2024

A changing climate is placing significant strain on urban environments as communities are contending with intensifying and more frequent hazards. Communities are simultaneously facing ongoing and new societal challenges that centre around a need for critical services and resources. To help people not just survive but also thrive, resilience hubs have emerged as a possible solution. These hubs are locations that provide information, resources, and temporary shelter during a range of disasters, but also function in an equally important, everyday role in providing services or programs for the community. Existing guidance, recommendations, and lessons learned from existing resilience hubs offer strong design, programmatic, and development examples. However, transportation has not yet been thoroughly considered, which affects hub placement, infrastructure, and associated evacuation plans. Moreover, choice-making for urban evacuations within the Canadian context is generally sparse, which can inhibit the development of needs-centred evacuation plans and response strategies.

This research aims to provide an early exploration in both of these areas — transportation to/from resilience hubs and urban evacuation choice-making — using Edmonton, Alberta as a case study. To gain the perspective of residents, the research employed a mixed-method approach that collected data via two literature reviews, a large region-wide survey (n=950 people) and focus groups with underserved populations (n=52 people). Using these data, analyses were conducted to provide a holistic overview of transportation needs, behaviour, and guidance related to resilience hubs and urban evacuations.
title: ADCO, Huitième cartulaire de Saint-Étienne de Dijon (1661-1667), Cart. 31 (G 135), 549 folios, f. 0678
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: cartulaire
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge

description: Huitième cartulaire de Saint-Étienne de Dijon (1661-1667), Archives départementales de la Côte-d'Or, Cart. 31 (G 135), 549 folios, f. 0678, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Huitième cartulaire de Saint-Étienne de Dijon (1661-1667), Archives départementales de la Côte-d'Or, Cart. 31 (G 135), 549 folios, f. 0678, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https://manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
MOESM2 of d-Î˛-Hydroxybutyrate and melatonin for treatment of porcine hemorrhagic shock and injury: a melatonin dose-ranging study
Creators: name: Wolf, Andrea
name: Mulier, Kristine
name: Sydne Muratore
name: Beilman, Gregory
Publisher: name: figshare
Year: 2017
Subjects: subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Science Policy

description: Additional file 2. Physiologic parameters and markers of organ function in pigs exposed to hemorrhagic shock, injury and resuscitation.
Subsurface bending and reorientation of tilted vortex lattices in the bulk due to Coulomb-like repulsion at the surface
Creators: name: Herrera, E.
name: Guillamon, I.
name: Galvis, J. A.
name: Correa, A.
name: Fente, A.
name: Vieira, S.
name: Suderow, H.
name: Martinovich, A. Yu.
name: Kogan, V. G.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: We study vortex lattices (VLs) in superconducting weak-pinning platelet-like crystals of $β$-Bi$_{2}$Pd in tilted fields with a Scanning Tunneling Microscope. We show that vortices exit the sample perpendicular to the surface and are thus bent beneath the surface. The structure and orientation of tilted VL in the bulk are, for large tilt angles, strongly affected by Coulomb-type intervortex repulsion at the surface due to stray fields.
Distribution of eigenstate populations and dissipative beating dynamics in uniaxial single-spin magnets
Creators: name: Hatomura, Takuya
name: Barbara, Bernard
name: Miyashita, Seiji
Publisher: name: arXiv
Year: 2017
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Numerical simulations of magnetization reversal of a quantum uniaxial magnet under a swept magnetic field [Hatomura, \textit{et al}., \textit{Quantum Stoner-Wohlfarth Model}, Phys. Rev. Lett. \textbf{116}, 037203 (2016)] are extended. In particular, how the "wave packet" describing the time-evolution of the system is scattered in the successive avoided level crossings is investigated from the viewpoint of the distribution of the eigenstate populations. It is found that the peak of the distribution as a function of the magnetic field does not depend on spin-size $S$, which indicates that the delay of magnetization reversal due to the finite sweeping rate is the same in both the quantum and classical cases. The peculiar synchronized oscillations of all the spin components result in the beating of the spin-length. Here, dissipative effects on this beating are studied by making use of the generalized Lindblad-type master equation. The corresponding experimental situations are also discussed in order to find conditions for experimental observations.
Photoionization of ions with synchrotron radiation: From ions in space to atoms in cages
Creators: name: Schippers, S.
name: Kilcoyne, A. L. D.
name: Phaneuf, R. A.
name: Müller, A.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Atomic Physics (physics.atom-ph)
subject: FOS: Physical sciences

description: The photon-ion merged-beams technique for the photoionization of mass/charge selected ionized atoms, molecules and clusters by x-rays from synchrotron radiation sources is introduced. Examples for photoionization of atomic ions are discussed by going from outer-shell ionization of simple few-electron systems to inner-shell ionization of complex many-electron ions. Fundamental ionization mechanisms are elucidated and the importance of the results for applications in astrophysics and plasma physics is pointed out. Finally, the unique capabilities of the photon-ion merged-beams technique for the study of photoabsorption by nanoparticles are demonstrated by the example of endohedral fullerene ions.
description: 19 pages, 16 figures
Additional file 1: Figure S1. of Intra-tumor heterogeneity in breast cancer has limited impact on transcriptomic-based molecular profiling
Creators: name: Govindasamy-Muralidharan Karthik
name: Rantalainen, Mattias
name: Stålhammar, Gustav
name: Lövrot, John
name: Ullah, Ikram
name: Alkodsi, Amjad
name: Ma, Ran
name: Wedlund, Lena
name: Lindberg, Johan
name: Frisell, Jan
name: Bergh, Jonas
name: Hartman, Johan
Publisher: name: figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Plant Biology

description: Representative immunohistochemical staining (IHC) images of heterogeneous expression patterns of (a) ER (b) PR (c) HER2 and (d) Ki-67 in two patients. Scale bar = 200 μm. Regions with higher protein expression are marked with red arrows and regions with lower protein staining are marked in green arrows. (PDF 568 kb)
Coupling parallel adaptive mesh refinement with a nonoverlapping domain decomposition solver
Creators: name: Kůs, Pavel
name: Šístek, Jakub
Publisher: name: arXiv
Year: 2017
Subjects: subject: Numerical Analysis (math.NA)
subject: Mathematical Software (cs.MS)
subject: FOS: Mathematics
subject: FOS: Computer and information sciences
subject: G.1.8
subject: 65N55

description: We study the effect of adaptive mesh refinement on a parallel domain decomposition solver of a linear system of algebraic equations. These concepts need to be combined within a parallel adaptive finite element software. A prototype implementation is presented for this purpose. It uses adaptive mesh refinement with one level of hanging nodes. Two and three-level versions of the Balancing Domain Decomposition based on Constraints (BDDC) method are used to solve the arising system of algebraic equations. The basic concepts are recalled and components necessary for the combination are studied in detail. Of particular interest is the effect of disconnected subdomains, a typical output of the employed mesh partitioning based on space-filling curves, on the convergence and solution time of the BDDC method. It is demonstrated using a large set of experiments that while both refined meshes and disconnected subdomains have a negative effect on the convergence of BDDC, the number of iterations remains acceptable. In addition, scalability of the three-level BDDC solver remains good on up to a few thousands of processor cores. The largest presented problem using adaptive mesh refinement has over 10^9 unknowns and is solved on 2048 cores.