cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Research report 2013
Creators: name: Korth, Martin
Publisher: name: Universität Ulm
Year: 2016
Subjects: subject: Universities; Germany; Ulm
subject: Research Ulm
subject: DDC 540 / Chemistry & allied sciences
subject: Universities and colleges; Germany
subject: Theoretical chemistry; Research
subject: Universität Ulm
subject: Theoretische Chemie
subject: Forschung

description: Forschungsbericht der Barbara-Mez-Starck Stiftungsprofessur für das Jahr 2013
Using probabilistic neural network to analyze the binary starsSchulte 3, EY Cep, HD 101131, and Haro 1-14c
Creators: name: Pirkhedri, Ali
name: Ghaderi, Kamal
Publisher: name: Research and Development Office, Prince of Songkla University
Year: 2018
Subjects: probabilistic neural network
binary systems
eclipsing
velocity curve

description: Songklanakarin Journal of Science and Technology, 40, 3, 676
Additional file 1 of Genomic analysis of the slope of the reaction norm for body weight in Australian sheep
Creators: name: Waters, Dominic L.
name: Clark, Sam A.
name: Moghaddar, Nasir
name: van der Werf, Julius H.
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1: Table S1. Breed composition of the dataset used to estimate contemporary group effects and reaction norm models.
Farm-Level Risk Factors for Lameness in 659 German Dairy Herds Kept in Loose Housing Systems
Creators: name: Tillack, Anna
name: Merle, Roswitha
name: Müller, Kerstin-Elisabeth
name: Hoedemaker, Martina
name: Jensen, Katharina Charlotte
name: Oehm, Andreas W.
name: Klawitter, Marcus
name: Stock, Annegret
Publisher: name: Freie Universität Berlin
Year: 2024
Subjects: subject: lameness prevalence
subject: dairy cows
subject: cubicle design
subject: feeding management
subject: lameness assessment
subject: 600 Technik, Medizin, angewandte Wissenschaften::630 Landwirtschaft::636 Viehwirtschaft
subject: 600 Technik, Medizin, angewandte Wissenschaften::630 Landwirtschaft::637 Milchverarbeitung und verwandte Produkte

description: Six hundred fifty-nine farms in three regions of Germany (North: n = 240, East: n = 247, and South: n = 172) were included in the study, which aims at determining the association of management-related risk factors with farm-level lameness in German dairy herds. For each risk factor, a generalised linear regression model with negative binomial distribution and logit link was built. Results showed that cows housed in deep-bedded cubicles had a lower risk of being lame than cows housed in other cubicle types. A larger cubicle width was associated with a lower risk of being lame. Feeding a total mixed ration was associated with lower lameness prevalence (compared to feeding a partial mixed ration or single components). For first lactation cows, lameness assessment performed daily (compared to less than daily) and during other work tasks (compared to lameness assessment as a separate work task) were associated with lower risk for lameness. Finally, the present study provided evidence for crucial associations of management-related risk factors with lameness in German dairy cows, especially in the fields of cubicle design, feeding management, and lameness assessment.
Willingness to pay for biological diversity conservation of theLower Mekong River Basin in Thailand: A contingent valuation study
Creators: name: Saksri Rakthai
Publisher: name: Research and Development Office, Prince of Songkla University
Year: 2018
Subjects: willingness to pay
biological diversity conservation
the Lower Mekong River Basin
contingent valuation method

description: Songklanakarin Journal of Science and Technology, 40, 3, 570
Toxins of locus of enterocyte effacement-negative shiga toxin-producing escherichia coli
Creators: name: Krause, Maike
name: Barth, Holger
name: Schmidt, Herbert
Publisher: name: Universität Ulm
Year: 2018
Subjects: subject: LEE-negative STEC
subject: Subtilase Cytotoxin
subject: Cytolethal distending toxin
subject: EHEC-Hly
subject: profiling studies
subject: O104:H4
subject: O113:H21
subject: TS18/08
subject: DDC 570 / Life sciences
subject: Escherichia coli; Pathogenicity
subject: Shiga toxins
subject: Verotoxine
subject: STEC

description: Studies on Shiga toxin-producing Escherichia coli (STEC) typically examine and classify the virulence gene profiles based on genomic analyses. Among the screened strains, a subgroup of STEC which lacks the locus of enterocyte effacement (LEE) has frequently been identified. This raises the question about the level of pathogenicity of such strains. This review focuses on the advantages and disadvantages of the standard screening procedures in virulence profiling and summarizes the current knowledge concerning the function and regulation of toxins encoded by LEE-negative STEC. Although LEE-negative STEC usually come across as food isolates, which rarely cause infections in humans, some serotypes have been implicated in human diseases. In particular, the LEE-negative E. coli O104:H4 German outbreak strain from 2011 and the Australian O113:H21 strain isolated from a HUS patient attracted attention. Moreover, the LEE-negative STEC O113:H21 strain TS18/08 that was isolated from minced meat is remarkable in that it not only encodes multiple toxins, but in fact expresses three different toxins simultaneously. Their characterization contributes to understanding the virulence of the LEE-negative STEC.
Additional file 2 of Genomic analysis of the slope of the reaction norm for body weight in Australian sheep
Creators: name: Waters, Dominic L.
name: Clark, Sam A.
name: Moghaddar, Nasir
name: van der Werf, Julius H.
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 2: Table S2. Descriptive statistics for post-weaning growth rate (PWGR) and post-weaning weight (PWWT).
Additional file 37 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes
Creators: name: Aterido, Adrià
name: López-Lasanta, María
name: Blanco, Francisco
name: Juan-Mas, Antonio
name: García-Vivar, María Luz
name: Erra, Alba
name: Pérez-García, Carolina
name: Sánchez-Fernández, Simón Ángel
name: Sanmartí, Raimon
name: Fernández-Nebro, Antonio
name: Alperi-López, Mercedes
name: Tornero, Jesús
name: Ortiz, Ana María
name: Fernández-Cid, Carlos Marras
name: Palau, Núria
name: Pan, Wenjing
name: Byrne-Steele, Miranda
name: Starenki, Dmytro
name: Weber, Daniel
name: Rodriguez-Nunez, Ivan
name: Han, Jian
name: Myers, Richard M.
name: Marsal, Sara
name: Julià, Antonio
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 37: Figure S9. Clone publicity profile of the study population. Graphical representation of the percentage of clones that are shared by more than two individuals (i.e., publicity degree) at the chain level. The clone publicity profile is separately shown for healthy individuals and rheumatoid arthritis patients. For each condition, the highest number of individuals sharing a clone is annotated on the right side. Abbreviations: CTRL, healthy individuals; N, sample size; RA, rheumatoid arthritis.
Distinct tissue niches direct lung immunopathology via CCL18 and CCL21 in severe COVID-19
Creators: name: Mothes, Ronja
name: Pascual-Reguant, Anna
name: Koehler, Ralf
name: Liebeskind, Juliane
name: Liebheit, Alina
name: Bauherr, Sandy
name: Philipsen, Lars
name: Dittmayer, Carsten
name: Laue, Michael
name: Von Manitius, Regina
name: Elezkurtaj, Sefer
name: Durek, Pawel
name: Heinrich, Frederik
name: Heinz, Gitta A.
name: Guerra, Gabriela M.
name: Obermayer, Benedikt
name: Meinhardt, Jenny
name: Ihlow, Jana
name: Radke, Josefine
name: Heppner, Frank L.
name: Enghard, Philipp
name: Stockmann, Helena
name: Aschman, Tom
name: Schneider, Julia
name: Corman, Victor M.
name: Sander, Leif E.
name: Mashreghi, Mir-Farzin
name: Conrad, Thomas
name: Hocke, Andreas C.
name: Niesner, Raluca A.
name: Radbruch, Helena
name: Hauser, Anja E.
Publisher: name: Freie Universität Berlin
Year: 2023
Subjects: subject: Immunopathogenesis
subject: Infection
subject: SARS-CoV-2
subject: Viral infection
subject: 600 Technik, Medizin, angewandte Wissenschaften::610 Medizin und Gesundheit::616 Krankheiten

description: Prolonged lung pathology has been associated with COVID-19, yet the cellular and molecular mechanisms behind this chronic inflammatory disease are poorly understood. In this study, we combine advanced imaging and spatial transcriptomics to shed light on the local immune response in severe COVID-19. We show that activated adventitial niches are crucial microenvironments contributing to the orchestration of prolonged lung immunopathology. Up-regulation of the chemokines CCL21 and CCL18 associates to endothelial-to-mesenchymal transition and tissue fibrosis within these niches. CCL21 over-expression additionally links to the local accumulation of T cells expressing the cognate receptor CCR7. These T cells are imprinted with an exhausted phenotype and form lymphoid aggregates that can organize in ectopic lymphoid structures. Our work proposes immune-stromal interaction mechanisms promoting a self-sustained and non-resolving local immune response that extends beyond active viral infection and perpetuates tissue remodeling.
Data-driven identification of situated meanings in corpus data using Latent Class Analysis
Creators: name: Rosemeyer, Malte
Publisher: name: Freie Universität Berlin
Year: 2024
Subjects: subject: situated meaning
subject: interaction
subject: modality
subject: periphrasis
subject: Latent Class Analysis
subject: 400 Sprache::410 Linguistik::410 Linguistik

description: Identifying the meanings of grammatical elements in context is a major challenge for corpus-linguistic studies of grammatical variation. This study proposes a novel solution to this problem. I describe the situated meanings of grammatical elements as latent constructs, i.e., social concepts that cannot be observed directly but need to be inferred from the way that speakers behave. I use Latent Class Analysis (LCA) to create a data-driven typology of meanings for three modal periphrases in spoken Spanish and compare this typology to manual classification of the data in terms of modality. My findings show that (a) the situated meanings identified by the LCA do not directly correspond to the modal meanings that are commonly assumed to govern the variation between the three periphrases, and (b) the data-driven typology of meanings explains better the variation between these periphrases.
Additional file 4 of Genomic analysis of the slope of the reaction norm for body weight in Australian sheep
Creators: name: Waters, Dominic L.
name: Clark, Sam A.
name: Moghaddar, Nasir
name: van der Werf, Julius H.
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 4: Table S3. Approximate number of reference animals used for imputation for each SNP panel.
Additional file 6 of Genomic analysis of the slope of the reaction norm for body weight in Australian sheep
Creators: name: Waters, Dominic L.
name: Clark, Sam A.
name: Moghaddar, Nasir
name: van der Werf, Julius H.
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 6: Table S4. Comparisons of additive genetic variance (Table S4a), heritability (Table S4b) and genetic correlations (Table S4c) between the three growth environments (low, average and high).
Implications of innate immunity in post-acute sequelae of non-persistent viral infections
Creators: name: Hirschenberger, Maximilian
name: Hunszinger, Victoria
name: Sparrer, Konstantin Maria Johannes
Publisher: name: Universität Ulm
Year: 2021
Subjects: subject: post-acute sequelae
subject: long COVID
subject: PASC
subject: long hauler syndrome
subject: DDC 610 / Medicine & health
subject: COVID-19; Complications
subject: Inflammation
subject: Immunity, Innate
subject: Cytokines
subject: Interferons
subject: Viruses
subject: Virus diseases
subject: Angeborene Immunität
subject: Viruskrankheit
subject: Komplikation
subject: Entzündung
subject: Cytokine

description: Non-persistent viruses classically cause transient, acute infections triggering immune responses aimed at the elimination of the pathogen. Successful viruses evolved strategies to manipulate and evade these anti-viral defenses. Symptoms during the acute phase are often linked to dysregulated immune responses that disappear once the patient recovers. In some patients, however, symptoms persist or new symptoms emerge beyond the acute phase. Conditions resulting from previous transient infection are termed post-acute sequelae (PAS) and were reported for a wide range of non-persistent viruses such as rota-, influenza- or polioviruses. Here we provide an overview of non-persistent viral pathogens reported to be associated with diverse PAS, among them chronic fatigue, auto-immune disorders, or neurological complications and highlight known mechanistic details. Recently, the emergence of post-acute sequelae of COVID-19 (PASC) or long COVID highlighted the impact of PAS. Notably, PAS of non-persistent infections often resemble symptoms of persistent viral infections, defined by chronic inflammation. Inflammation maintained after the acute phase may be a key driver of PAS of non-persistent viruses. Therefore, we explore current insights into aberrant activation of innate immune signaling pathways in the post-acute phase of non-persistent viruses. Finally, conclusions are drawn and future perspectives for treatment and prevention of PAS are discussed.
Uni Ulm intern - das Ulmer Universitätsmagazin, Nr. 242 (31. Jg.), Januar 2001
Creators: name: (:Unkn) Unknown
Publisher: name: Universität Ulm
Year: 2016
Subjects: subject: Uni Ulm intern
subject: Universities; Germany; Ulm
subject: Ulm / Universität

description: N/A
Additional file 2 of Exposure of human cerebral microvascular endothelial cells hCMEC/D3 to laminar shear stress induces vascular protective responses
Creators: name: Choublier, Nina
name: Taghi, Meryam
name: Menet, Marie-Claude
name: Le Gall, Morgane
name: Bruce, Johanna
name: Chafey, Philippe
name: Guillonneau, François
name: Moreau, Amélie
name: Denizot, Claire
name: Parmentier, Yannick
name: Nakib, Samir
name: Borderie, Didier
name: Bouzinba-Segard, Haniaa
name: Couraud, Pierre-Olivier
name: Bourdoulous, Sandrine
name: Declèves, Xavier
Publisher: name: figshare
Year: 2022
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: Plant Biology

description: Additional file 2: Table S1. Target peptides and selected ions used in the LC-MS/MS multiplexed MRM method analysis, according to the protocol previously reported [95]. Table S2. Characteristics of primary antibodies used for immunostaining. Table S3. Significantly (a) upregulated and (b) downregulated proteins in hCMEC/D3 cells cultured under shear stress (both 5 and 10 dyn.cm-²) for 72 hours compared to the static culture. Selection criteria were |fold change| > 1.2 and both ANOVA and Student t-test p-values < 0.01, plus ON and OFF proteins (respectively annotated + and –).Table S4. Significantly upregulated and downregulated proteins in hCMEC/D3 cells cultured under shear stress (at 5 or 10 dyn.cm-²) for 72 hours compared to the static culture . Selection criteria were |fold change| > 1.2 and both ANOVA and Student t-test p-values < 0.05. Table S5. Upstream regulators identified by Ingenuity Pathway Analysis (Qiagen), and their target molecules. Comparison was made between the proteomes at 5 or 10 dyn.cm-2 shear stress versus static culture) appeared to be upstream regulators according to Ingenuity Pathway Analysis (Qiagen). Figure. S1. Orientation of hCMEC/D3 cells cultured in static condition (blue) or exposed to an SS of 5 dyn/cm² (orange) or 10 dyn/cm² (red), in the Ibidi µ-Slides (solid line). The graph reports the calculations obtained using the OrientationJ plug-in of the FIJI software, as means of the triplicates with or without standard deviation. The 0° angle corresponds to the axis of the channel (as well as the direction of the flow), and the angles – 90° and 90° correspond to the orientation perpendicular to the channel
Additional file 40 of Seven-chain adaptive immune receptor repertoire analysis in rheumatoid arthritis reveals novel features associated with disease and clinically relevant phenotypes
Creators: name: Aterido, Adrià
name: López-Lasanta, María
name: Blanco, Francisco
name: Juan-Mas, Antonio
name: García-Vivar, María Luz
name: Erra, Alba
name: Pérez-García, Carolina
name: Sánchez-Fernández, Simón Ángel
name: Sanmartí, Raimon
name: Fernández-Nebro, Antonio
name: Alperi-López, Mercedes
name: Tornero, Jesús
name: Ortiz, Ana María
name: Fernández-Cid, Carlos Marras
name: Palau, Núria
name: Pan, Wenjing
name: Byrne-Steele, Miranda
name: Starenki, Dmytro
name: Weber, Daniel
name: Rodriguez-Nunez, Ivan
name: Han, Jian
name: Myers, Richard M.
name: Marsal, Sara
name: Julià, Antonio
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 40. Review history.
Comparative characteristics of patients with type 2 diabetes mellitus treated by bariatric surgery versus medical treatment: a multicentre analysis of 277,862 patients from the German/Austrian DPV database
Creators: name: Laubner, Katharina
name: Prinz, Nicole
name: Brückel, Joachim
name: Serwas, Andreas
name: Altmeier, Marcus
name: Welp, Reinhard
name: Krakow, Dietmar
name: Groß, Felix
name: Bollow, Esther
name: Seufert, Jochen
name: Holl, Reinhard
name: DPV Initiative
Publisher: name: Universität Ulm
Year: 2018
Subjects: subject: Medical treatment
subject: DDC 610 / Medicine & health
subject: Diabetes mellitus, Type 2
subject: Bariatric surgery
subject: Therapeutics
subject: Diabetes mellitus Typ 2
subject: Fettsucht
subject: Magenchirurgie
subject: Therapie

description: Introduction: Bariatric surgery is a well-established treatment option for serious obesity and concomitant type 2 diabetes mellitus (T2DM). In this analysis, we investigated predictors for bariatric surgery in everyday clinical practice. Materials and Methods: In the DPV-registry, patients with T2DM from Germany and Austria treated by bariatric surgery were compared to non-surgery controls by descriptive statistics and regression analysis. Results: Among 277,862 patients with T2DM, 0.07% underwent bariatric surgery. Surgery patients were predominantly female [61.20%], younger [median age (Q1;Q3) 54.74 (47.40;61.61) vs. 70.04 (60.36;77.58) years] and had a longer diabetes duration [11.21 (7.15;17.93) vs. 8.36 (2.94;14.91) years]. They had a higher BMI [40.02 vs. 30.61 kg/m2, adjusted p<0.0001] and a slightly lower HbA1c [7.25 vs. 7.56%, adjusted p< 0.05]. There was a trend using more often insulin therapy (52.79 vs.50.08%, n.s.) with no difference in insulin dose/kg × day [0.56 vs. 0.58, n.s.]. Sleeve gastrectomy was performed most frequently, followed by Roux-en-Y gastric bypass, gastric banding, gastric balloon and others. A 2-year follow-up data in 29 patients demonstrated significant reductions in BMI [45.23 to 38.00 kg/m2, p< 0.005] and HbA1c [7.98 to 6.98%, p<0.005],and a trend for reduced insulin requirements [62.07 vs. 44.83%, n.s.]. Conclusion: Despite favourable 2-year outcomes, bariatric surgery is still used rarely in patients with T2DM and obesity. BMI rather than metabolic control seems to represent the major selector for or against bariatric surgery in T2DM.
Supplemental Material - Clinical First-Trimester Prediction Models for Gestational Diabetes Mellitus: A Systematic Review and Meta-Analysis
Creators: name: Huang, Qi-Fang
name: Hu, Yin-Chu
name: Wang, Chong-Kun
name: Huang, Jing
name: Shen, Mei-Di
name: Ren, Li-Hua
Publisher: name: SAGE Journals
Year: 2022
Subjects: Nursing not elsewhere classified

description: Supplemental Material for Clinical First-Trimester Prediction Models for Gestational Diabetes Mellitus: A Systematic Review and Meta-Analysis by Qi-Fang Huang, MSc, RN, Yin-Chu Hu, PhD, RN, Chong-Kun Wang, MSc, RN, Jing Huang, PhD, RN, Mei-Di Shen, PhD, RN, and Li-Hua Ren, MD, PhD in Biological Research For Nursing
Additional file 1 of Using Bayesian state-space models to understand the population dynamics of the dominant malaria vector, Anopheles funestus in rural Tanzania
Creators: name: Ngowo, Halfan S.
name: Okumu, Fredros O.
name: Hape, Emmanuel E.
name: Mshani, Issa H.
name: Ferguson, Heather M.
name: Matthiopoulos, Jason
Publisher: name: figshare
Year: 2022
Subjects: subject: Ecology
subject: FOS: Biological sciences

description: Additional file 1: Figure S1. SSMs model development R codes. Figure S2. Goodness-of-fit: Observed versus predicted unfed, bloodfed and gravid densities across all populations. Adjusted R-squared, intercept and slope values are from a linear model of the predicted against observed values. Dotted lines correspond to 1:1 line. Left column (a,c,d) is data collected from June 2018 to May 2019 and right column (b,d,e) is data from Jan-Dec 2015. Grey area is the period with rainfall. Figure S3.1. Prior (orange histogram) and posterior (blue histogram) distribution of the main baseline and observational parameters in the state-space model. Figure S3.2. Prior (orange histogram) and posterior (blue histogram) distribution of the main environmental covariates parameters in the state-space model.
sj-docx-1-jmh-10.1177_15579883221129349 – Supplemental material for Qualitative Identification of Intervention Preferences to Support Men’s Engagement and Retention in TB Care in South Africa
Creators: name: Medina-Marino, Andrew
name: Bezuidenhout, Dana
name: Ngcelwane, Nondumiso
name: Cornell, Morna
name: Wainberg, Milton
name: Beyrer, Chris
name: Bekker, Linda-Gail
name: Daniels, Joseph
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: 111099 Nursing not elsewhere classified
subject: 111799 Public Health and Health Services not elsewhere classified

description: Supplemental material, sj-docx-1-jmh-10.1177_15579883221129349 for Qualitative Identification of Intervention Preferences to Support Men’s Engagement and Retention in TB Care in South Africa by Andrew Medina-Marino, Dana Bezuidenhout, Nondumiso Ngcelwane, Morna Cornell, Milton Wainberg, Chris Beyrer, Linda-Gail Bekker and Joseph Daniels in American Journal of Men's Health
РАЗВИТИЕ ТВОРЧЕСТВА УЧАЩИХСЯ 1-4 КЛАССОВ НА ОСНОВЕ ИННОВАЦИОННО-КЛАСТЕРНОГО ПОДХОДА
Creators: name: Хамидов, Джамшид
Publisher: name: Zenodo
Year: 2024

description: В данной статье освещается вопрос развития творческих способностей учащихся 1-4 классов на основе инновационного кластерного подхода в современной системе образования.
Entanglement quantification from incomplete measurements: applications using photon-number-resolving weak homodyne detectors
Creators: name: Puentes, Graciana
name: Datta, Animesh
name: Feito, Alvaro
name: Eisert, Jens
name: Plenio, Martin B.
name: Walmsley, Ian A.
Publisher: name: Universität Ulm
Year: 2010
Subjects: subject: DDC 530 / Physics
subject: Quantum computing
subject: Quantentechnologie

description: The certificate of success for a number of important quantum information processing protocols, such as entanglement distillation, is based on the difference in the entanglement content of the system quantum states before and after the protocol. In such cases, effective bounds need to be placed on the entanglement of non-local states consistent with statistics obtained from local measurements. In this paper, we study numerically the ability of a hybrid homodyne detector that combines phase sensitivity and photon-number resolution to set accurate bounds on the entanglement content of two-mode quadrature squeezed states without the need for full state tomography. We show that it is possible to set tight lower bounds on the entanglement of a family of two-mode degaussified states using only a few measurements. This presents a significant improvement over the resource requirements for the experimental demonstration of continuous-variable entanglement distillation, which traditionally relies on full quantum state tomography.
Additional file 2 of Exploiting document graphs for inter sentence relation extraction
Creators: name: Le, Hoang-Quynh
name: Can, Duy-Cat
name: Collier, Nigel
Publisher: name: figshare
Year: 2022
Subjects: subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Science Policy

description: Additional file 2 Appendix B. The full versions of the abstracts that used in Table 8. Examples of errors on the BC5 CDR test set.
Additional file 3 of Multi-Omics integration can be used to rescue metabolic information for some of the dark region of the Pseudomonas putida proteome
Creators: name: Tavis, Steven
name: Hettich, Robert L.
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Computational Biology

description: Additional file 3: Figure S1. On the left are plotted individual PUF metrics. On the right are quantile-quantile plots of the same data. White dots represent measured values black lines represent bootstrap resamples. Figure S2. ROC curve for the functional similarity predictive model (see Fig 1B). Area under the curve is 0.77. Figure S3. Results of the enrichment model for InterProScan features using the same model as the GO enrichement analysis. On the left are plotted samples from the posterior distribution of odds ratios for each element with at least 6 observations in each condition. Black dots represent the median of the posterior and black lines represent 0.1-0.9 quantiles. On the right are plotted the number of proteins annotated with each element. Table S1. A summary of the evidence used in Biocyc GO annotations. Count refers to the number of GO terms supported with each evidence code. Table S2. A summary of the evidence used in the Pseudomonas Genome Database GO annotations. Count refers to the number of GO terms supported with each evidence code. Table S3. A summary of the evidence used in Uniprot GO annotations. Count refers to the number of GO terms supported with each evidence code. Table S4. The vector of scores used in the protein-protein similarity model for the guilt-by-association arm of the analysis. Table S5. Summary statistics used as prediction features for the guilt-by-association annotation model. Table S6. Summary statistics used as prediction features for the structural similarity annotation model. Table S7. Hypothesized functions based on a manual analysis of the data collected for both predictive models and visualizations of RUPEE hit structural alignments using the PDB pairwise structural alignment tool.
Additional file 1 of Exploiting document graphs for inter sentence relation extraction
Creators: name: Le, Hoang-Quynh
name: Can, Duy-Cat
name: Collier, Nigel
Publisher: name: figshare
Year: 2022
Subjects: subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Science Policy

description: Additional file 1 Appendix A. Example of a document subgraph.
Exploring online and in-store purchase willingness: associations with the Big Five personality traits, Trust, and Need for Touch
Creators: name: Hermes, Anna
name: Sindermann, Cornelia
name: Montag, Christian
name: Riedl, René
Publisher: name: Universität Ulm
Year: 2022
Subjects: subject: consumer personality
subject: Big Five
subject: trust
subject: need for touch
subject: willingness to purchase
subject: online shopping
subject: in-store shopping
subject: cross-channel shopping
subject: DDC 150 / Psychology
subject: Personality
subject: E-commerce
subject: Teleshopping
subject: Consumer behavior
subject: Personality assessment
subject: Fünffaktorenmodell der Persönlichkeit
subject: Online-Handel
subject: Verbraucherverhalten

description: Nowadays, customers can utilize both online and in-store retail channels. Consequently, it is crucial for retailers to understand the possible drivers of retail channel selection, including customers’ personalities, degrees of trust, and product touch preferences. Unfortunately, current omnichannel research only scarcely addresses the effects of personality, trust, and desire to touch a product before purchasing it on willingness to purchase and how those effects vary between online and in-store shopping. Thus, we conducted an exploratory study. Our analysis of survey data (N = 1,208)—which controls for respondents’ age, gender, and education—reveals that across both the willingness to purchase in-store and online, a higher level of e-vendor trust is a significant, positive predictor. However, we also identify several channel-related differences, including that Trust Propensity, as well as the Big Five traits of Extraversion, Agreeableness, and Conscientiousness are significantly positively related to in-store, but not online, purchase willingness. We also find that Instrumental Need for Touch (defined as goal-motivated touch of a product) is positively related to in-store, but negatively related to online, purchase willingness. Finally, we highlight opportunities for future research and discuss how retail managers might enhance customer experiences in their physical and online stores.
Additional file 1 of Association of cognitive enhancers and incident seizure risk in dementia: a population-based study
Creators: name: Ha, Junghee
name: Son, Nak-Hoon
name: Park, Young Ho
name: Lee, Eun
name: Kim, Eosu
name: Jung Kim, Woo
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Neuroscience
subject: Pharmacology
subject: Biotechnology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1. Supplementary File.
Additional file 4 of Multi-Omics integration can be used to rescue metabolic information for some of the dark region of the Pseudomonas putida proteome
Creators: name: Tavis, Steven
name: Hettich, Robert L.
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Computational Biology

description: Additional file 4. This file contains the notes from the manual reanalysis of specific proteins in Pseudomonas putida. These proteins were chosen for reanalysis based on either the large number of predicted terms from the automatic models or based on requests from collaborators.
Supplemental Material - Computed tomography-based body composition measures in COPD and their association with clinical outcomes: A systematic review
Creators: name: Nicholson, John M
name: Orsso, Camila E
name: Nourouzpour, Sahar
name: Elangeswaran, Brenawen
name: Chohan, Karan
name: Orchanian-Cheff, Ani
name: Fidler, Lee
name: Mathur, Sunita
name: Rozenberg, Dmitry
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 111702 Aged Health Care
subject: FOS: Health sciences
subject: 110203 Respiratory Diseases
subject: FOS: Clinical medicine

description: Supplemental Material for Computed tomography-based body composition measures in COPD and their association with clinical outcomes: A systematic review by John M Nicholson, Camila E Orsso, Sahar Nourouzpour, Brenawen Elangeswaran, Karan Chohan, Ani Orchanian-Cheff, Lee Fidler, Sunita Mathur and Dmitry Rozenberg in Chronic Respiratory Disease
Focus on quantum tomography
Creators: name: Banaszek, K.
name: Cramer, M.
name: Gross, D.
Publisher: name: Universität Ulm
Year: 2013
Subjects: subject: DDC 530 / Physics
subject: Quantum Systems
subject: Wigner-Gleichung

description: Abstract Quantum tomography has come a long way from early reconstructions of Wigner functions from projections along quadratures to the full characterization of multipartite systems. Now, it is routinely carried out in a wide variety of systems. And yet, many fundamental questions remain unanswered. In recent years, a spate of radical new experimental, theoretical and mathematical developments have occurred. The appeal of the subject lies largely in the breadth of techniques that must be brought together in order to fully understand the problem. This ‘focus on’ collection provides a platform for facilitating the exchange of ideas between the different communities involved in this process.
Additional file 1 of Delivery fidelity of the REACT (REtirement in ACTion) physical activity and behaviour maintenance intervention for community dwelling older people with mobility limitations
Creators: name: Cross, Rosina
name: Greaves, Colin J.
name: Withall, Janet
name: Rejeski, W. Jack.
name: Stathi, Afroditi
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Science Policy
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Additional file 1. Sample REACT Health Behaviour Maintenance Session Plan.
Additional file 2 of Delivery fidelity of the REACT (REtirement in ACTion) physical activity and behaviour maintenance intervention for community dwelling older people with mobility limitations
Creators: name: Cross, Rosina
name: Greaves, Colin J.
name: Withall, Janet
name: Rejeski, W. Jack.
name: Stathi, Afroditi
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Science Policy
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Additional file 2. Fidelity Measure Scoring Instructions.
sj-pdf-2-cph-10.1177_17151635221128263 – Supplemental material for Effectiveness and cost-effectiveness of an intensive and abbreviated individualized smoking cessation program delivered by pharmacists: A pragmatic, mixed-method, randomized trial
Creators: name: Phillips, Leslie C.E.
name: Nguyen, Hai
name: Genge, Terri L.
name: Maddigan, W. Joy
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: FOS: Clinical medicine

description: Supplemental material, sj-pdf-2-cph-10.1177_17151635221128263 for Effectiveness and cost-effectiveness of an intensive and abbreviated individualized smoking cessation program delivered by pharmacists: A pragmatic, mixed-method, randomized trial by Leslie C.E. Phillips, Hai Nguyen, Terri L. Genge and W. Joy Maddigan in Canadian Pharmacists Journal / Revue des Pharmaciens du Canada
Modular PUF coding chain with high-speed Reed-Muller decoder
Creators: name: Mandry, Holger
name: Herkle, Andreas
name: Kürzinger, Ludwig
name: Müelich, Sven
name: Becker, Joachim
name: Fischer, Robert
name: Ortmanns, Maurits
Publisher: name: Universität Ulm
Year: 2019
Subjects: subject: Reed-Muller
subject: PUF
subject: Physical unclonable function
subject: Field programmable gate array
subject: Generalized concatenated codes
subject: DDC 004 / Data processing & computer science
subject: DDC 620 / Engineering & allied operations
subject: Field programmable gate arrays ; Congresses
subject: Integrated circuits
subject: Computer engineering ; Congresses
subject: Transistors, Electronic
subject: RM-Code
subject: Konkatenationscode
subject: Integrierte Schaltung

description: Physical Unclonable Functions (PUFs) offer the possibility to produce unique fingerprints for integrated circuits. As raw PUF responses are affected by noise, some post-processing steps are necessary. We present a coding chain test framework for PUFs on Field Programmable Gate Arrays. The framework allows easy exchange, evaluation and comparison of different PUF implementations, coding algorithms and other chain modules. For a testing framework, the execution time of the evaluated algorithm is a bottleneck, since a huge amount of runs are supposed to be done. Hence, we additionally present a new type of Reed-Muller decoder hardware architecture using parallel modules to speed up the decoding process. The decoding time could be decreased by 95% in comparison to existing implementations at the cost of 41 times higher slice count.
JAPPL-00468-2024 R1 Supplemental Figures and Tables 10.16.24.pdf
Creators: name: Skiles, Chad
name: Boyd, Gerard
name: Gouw, Aaron
name: Robbins, Ethan
name: Minchev, Kiril
name: Ryder, Jeffrey
name: Ploutz-Snyder, Lori L.
name: Trappe, Todd
name: Trappe, Scott
Publisher: name: figshare
Year: 2024
Subjects: classificationCode: 420702
subject: Exercise physiology

description: Supplemental Figures and Tables to JAPPL-00468-2024.
sj-docx-1-pom-10.1177_03057356221122607 – Supplemental material for Written in the face? Facial expressions during pleasant and unpleasant chills
Creators: name: Klepzig, Kai
name: Stender, Katharina
name: Lotze, Martin
name: Hamm, Alfons O.
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: Education
subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology

description: Supplemental material, sj-docx-1-pom-10.1177_03057356221122607 for Written in the face? Facial expressions during pleasant and unpleasant chills by Kai Klepzig, Katharina Stender, Martin Lotze and Alfons O. Hamm in Psychology of Music
Synergistic targeting and resistance to PARP inhibition in DNA damage repair-deficient pancreatic cancer
Creators: name: Gout, Johann
name: Perkhofer, Lukas
name: Morawe, Mareen
name: Arnold, Frank
name: Ihle, Michaela
name: Lange, Sebastian
name: Roger, Elodie
name: Kraus, Johann M.
name: Stifter, Katja
name: Hahn, Stephan A.
name: Zamperone, Andrea
name: Engleitner, Thomas
name: Müller, Martin
name: Walter, Karolin
name: Rodriguez-Aznar, Eva
name: Sainz Jr, Bruno
name: Hermann, Patrick C.
name: Hessmann, Elisabeth
name: Müller, Sebastian
name: Azoitei, Ninel
name: Lechel, Andre
name: Liebau, Stefan
name: Wagner, Martin
name: Simeone, Diane M.
name: Kestler, Hans A.
name: Seufferlein, Thomas
name: Wiesmüller, Lisa
name: Rad, Roland
name: Frappart, Pierre-Olivier
name: Kleger, Alexander
Publisher: name: Universität Ulm
Year: 2020
Subjects: subject: DDC 610 / Medicine & health
subject: DNA Damage
subject: DNS-Schädigung

description: Objective ATM serine/threonine kinase (ATM) is the most frequently mutated DNA damage response gene, involved in homologous recombination (HR), in pancreatic ductal adenocarcinoma (PDAC). Design Combinational synergy screening was performed to endeavour a genotype-tailored targeted therapy. Results Synergy was found on inhibition of PARP, ATR and DNA-PKcs (PAD) leading to synthetic lethality in ATM-deficient murine and human PDAC. Mechanistically, PAD-induced PARP trapping, replication fork stalling and mitosis defects leading to P53-mediated apoptosis. Most importantly, chemical inhibition of ATM sensitises human PDAC cells toward PAD with long-term tumour control in vivo. Finally, we anticipated and elucidated PARP inhibitor resistance within the ATM-null background via whole exome sequencing. Arising cells were aneuploid, underwent epithelial-mesenchymal-transition and acquired multidrug resistance (MDR) due to upregulation of drug transporters and a bypass within the DNA repair machinery. These functional observations were mirrored in copy number variations affecting a region on chromosome 5 comprising several of the upregulated MDR genes. Using these findings, we ultimately propose alternative strategies to overcome the resistance. Conclusion Analysis of the molecular susceptibilities triggered by ATM deficiency in PDAC allow elaboration of an efficient mutation-specific combinational therapeutic approach that can be also implemented in a genotype-independent manner by ATM inhibition.
sj-pdf-2-hpi-10.1177_11207000221130270 – Supplemental material for Operative management of metastatic disease of the acetabulum: review of the literature and prevailing concepts
Creators: name: Christ, Alexander B
name: Bartelstein, Meredith K
name: Kenan, Shachar
name: Ogura, Koichi
name: Fujiwara, Tomohiro
name: Healey, John H
name: Fabbri, Nicola
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 110314 Orthopaedics
subject: FOS: Clinical medicine
subject: 110604 Sports Medicine
subject: FOS: Health sciences

description: Supplemental material, sj-pdf-2-hpi-10.1177_11207000221130270 for Operative management of metastatic disease of the acetabulum: review of the literature and prevailing concepts by Alexander B Christ, Meredith K Bartelstein, Shachar Kenan, Koichi Ogura, Tomohiro Fujiwara, John H Healey and Nicola Fabbri in HIP International
Additional file 3 of Delivery fidelity of the REACT (REtirement in ACTion) physical activity and behaviour maintenance intervention for community dwelling older people with mobility limitations
Creators: name: Cross, Rosina
name: Greaves, Colin J.
name: Withall, Janet
name: Rejeski, W. Jack.
name: Stathi, Afroditi
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Science Policy
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Additional file 3. Scoring of REACT Intervention BCTs and processes on the 11-item fidelity checklist.
Efficiency gains for thermally coupled solar hydrogen production in extreme cold
Creators: name: Kölbach, Moritz
name: Rehfeld, Kira
name: May, Matthias M.
Publisher: name: Universität Ulm
Year: 2021
Subjects: subject: Solare Wasserspaltung
subject: DDC 540 / Chemistry & allied sciences
subject: Hydrogen
subject: Electrolysis
subject: Wasserstoff
subject: Elektrolyse
subject: Fotoelektrochemie

description: Hydrogen produced from water using solar energy constitutes a sustainable alternative to fossil fuels, but solar hydrogen is not yet economically competitive. A major question is whether the approach of coupling photovoltaics via the electricity grid to electrolysis is preferential to higher levels of device integration in ‘artificial leaf’ designs. Here, we scrutinise the effects of thermally coupled solar water splitting on device efficiencies and catalyst footprint for sub-freezing ambient temperatures of −20 °C. These conditions are found for a significant fraction of the year in many world regions. Using a combination of electrochemical experiments and modelling, we demonstrate that thermal coupling broadens the operating window and significantly reduces the required catalyst loading when compared to electrolysis decoupled from photovoltaics. Efficiency benefits differ qualitatively for dual- and triple-junction solar absorbers, which has implications for the general design of outdoor-located photoelectochemical devices. Similar to high-efficiency photovoltaics that reached technological maturity in space, application cases in polar or alpine climates could support the scale-up of solar hydrogen at the global scale.
The power of the middle bit of a #P function
Creators: name: Green, Frederic
name: Köbler, Johannes
name: Toran, Jacobo
Publisher: name: Universität Ulm
Year: 2016
Subjects: subject: DDC 004 / Data processing & computer science
subject: Computational complexity

description: We study the class of languages which can be solved in polynomial time with the additional information of one bit from a #P function. In particular we show that the polynomial hierarchy and the classes ModkP are low for this class. We translate these results to the area of circuit complexity using the concept of a MidBit gate, which is defined to take binary inputs x_1,...,x_n and output the middle bit in the binary representation of the sum over the inputs. We show that every language in ACC can be computed by a family of depth-2 deterministic circuits of quasi-polynomial size with a MidBit gate at the root and AND-gates of poly-logarithmic fan-in at the leaves. This result improves the known upper bounds for the class ACC.
sj-pdf-3-hpi-10.1177_11207000221130270 – Supplemental material for Operative management of metastatic disease of the acetabulum: review of the literature and prevailing concepts
Creators: name: Christ, Alexander B
name: Bartelstein, Meredith K
name: Kenan, Shachar
name: Ogura, Koichi
name: Fujiwara, Tomohiro
name: Healey, John H
name: Fabbri, Nicola
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 110314 Orthopaedics
subject: FOS: Clinical medicine
subject: 110604 Sports Medicine
subject: FOS: Health sciences

description: Supplemental material, sj-pdf-3-hpi-10.1177_11207000221130270 for Operative management of metastatic disease of the acetabulum: review of the literature and prevailing concepts by Alexander B Christ, Meredith K Bartelstein, Shachar Kenan, Koichi Ogura, Tomohiro Fujiwara, John H Healey and Nicola Fabbri in HIP International
Comparison of chloroaluminate melts for aluminum graphite dual‐ion battery application
Creators: name: Hoeppner, Katrin
name: Hahn, Robert
Publisher: name: Universität Ulm
Year: 2020
Subjects: subject: DDC 540 / Chemistry & allied sciences
subject: Electrolytes
subject: Electrochemistry
subject: Elektrochemie
subject: Elektrolyt

description: Let the best electrolyte win! A comparison of aluminum graphite dual-ion cells (AGDICs) electrochemical characteristics employing the conventional 1-ethyl-3-methylimidazolium chloride:aluminum trichloride (EMIMCl : AlCl3) electrolyte and two popular deep eutectic solvents (DESs), namely urea : AlCl3 and acetamide:AlCl3, is shown here. Herein, we report a comparison of aluminum graphite dual-ion cells (AGDICs) electrochemical characteristics employing the conventional 1-ethyl-3-methylimidazolium chloride:aluminum trichloride (EMIMCl : AlCl3) electrolyte and two popular deep eutectic solvents (DESs), namely urea : AlCl3 and acetamide:AlCl3. The three electrolytes′ characteristics have been evaluated in terms of Al-stripping deposition capability and cycling behavior in AGDICs. The results evidence the EMIMCl : AlCl3′s Al-stripping deposition and rate capability in AGDICs superior characteristics addressed to the lower viscosity and higher conductivity with respect to the urea : AlCl3 and acetamide:AlCl3. On the other hand, the urea : AlCl3 guarantees a much higher columbic efficiency in AGDICs, thanks to the superior electrochemical window stability.
Table S1 - Supplemental material for Prevalence and Incidence of Localized Scleroderma: A Qualitative Systematic Review
Creators: name: Mahmood, Farhan
name: Nguyen, Alex
name: Muntyanu, Anastasiya
name: Jfri, Abdulhadi
name: McCuaig, Catherine
name: Chédeville, Gaëlle
name: Piram, Maryam
name: Netchiporouk, Elena
Publisher: name: SAGE Journals
Year: 2022
Subjects: Medicine

description: Supplemental material, Table S1, for Prevalence and Incidence of Localized Scleroderma: A Qualitative Systematic Review by Farhan Mahmood, Alex Nguyen, Anastasiya Muntyanu, Abdulhadi Jfri, Catherine McCuaig, Gaëlle Chédeville, Maryam Piram and Elena Netchiporouk in Journal of Cutaneous Medicine and Surgery