cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Microdon analis Macquart
Creators: name: Ricarte, Antonio
name: Rotheray, Graham E.
name: Lyszkowski, Richard M.
name: Hancock, E. Geoffrey
name: Hewitt, Stephen M.
name: Watt, Kenneth R.
name: Horsfield, David
name: Macgowan, Iain
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Syrphidae
Microdon
Microdon analis

description: Microdon analis (Macquart)
Material examined. Leg. A. Ricarte: 3♂ and 1♀, A Fontela, near A Tara, path edge vegetation, 1280 m, 25.v.2012 [NMS]. Leg. R.M. Lyszkowski: 1♂, Formigueiros top, 1635 m, 25.v.2012. Leg. S.M. Hewitt: 1♂, A Fontela, near A Tara, 23.v.2012 [CALMG].
description: Published as part of Ricarte, Antonio, Rotheray, Graham E., Lyszkowski, Richard M., Hancock, E. Geoffrey, Hewitt, Stephen M., Watt, Kenneth R., Horsfield, David & Macgowan, Iain, 2014, The syrphids of Serra do Courel, Northern Spain and description of a new Cheilosia Meigen species (Diptera: Syrphidae), pp. 401-422 in Zootaxa 3793 (4) on page 412, DOI: 10.11646/zootaxa.3793.4.1, http://zenodo.org/record/225393
A Szemerédi type theorem for sets of positive density in approximate lattices
Creators: name: Björklund, Michael
name: Fish, Alexander
Publisher: name: arXiv
Year: 2024
Subjects: subject: Dynamical Systems (math.DS)
subject: Combinatorics (math.CO)
subject: Number Theory (math.NT)
subject: FOS: Mathematics
subject: 11B30, 22D40, 05D10

description: An extension of Szemerédi's Theorem is proved for sets of positive density in approximate lattices in general locally compact and second countable abelian groups. As a consequence, we establish a recent conjecture of Klick, Strungaru and Tcaciuc. Via a novel version of Furstenberg's Correspondence principle, which should be of independent interest, we show that our Szemerédi Theorems can be deduced from a general \emph{transverse} multiple recurrence theorem, which we establish using recent works of Austin.
description: 32 pages
Additional file 3: of Genome-wide analysis of WRKY gene family in the sesame genome and identification of the WRKY genes involved in responses to abiotic stresses
Creators: name: Donghua Li
name: Liu, Pan
name: Jingyin Yu
name: Linhai Wang
name: Komivi Dossa
name: Yanxin Zhang
name: Zhou, Rong
name: Wei, Xin
name: Xiurong Zhang
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology
subject: Computational Biology

description: Conserved motifs of WRKY proteins in sesame. Significant motifs of more than 10 aa in length were predicted using MEME analysis. The motif IDs, consensus sequence lengths in aa, and e-value of each predicted motif are shown. (PDF 234Â kb)
Additional file 3: of Genome-wide analysis of WRKY gene family in the sesame genome and identification of the WRKY genes involved in responses to abiotic stresses
Creators: name: Donghua Li
name: Liu, Pan
name: Jingyin Yu
name: Linhai Wang
name: Komivi Dossa
name: Yanxin Zhang
name: Zhou, Rong
name: Wei, Xin
name: Xiurong Zhang
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Marine Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Virology
subject: Computational Biology

description: Conserved motifs of WRKY proteins in sesame. Significant motifs of more than 10 aa in length were predicted using MEME analysis. The motif IDs, consensus sequence lengths in aa, and e-value of each predicted motif are shown. (PDF 234Â kb)
Performance limits of information engines
Creators: name: Buisson, Johan du
name: Sivak, David A.
name: Bechhoefer, John
Publisher: name: arXiv
Year: 2024
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We review recent studies of a colloidal information engine that consists of a bead in water and held by an optical trap. The bead is ratcheted upward without any apparent external work, by taking advantage of favorable thermal fluctuations. Much of the previous work on such engines aimed to show that accounting for information-processing costs can reconcile the observed motion with the second law of thermodynamics. By contrast, we focus on the factors that limit the performance of such engines by optimizing variously the upward velocity, rate of gravitational free-energy extraction, or ability to track a trajectory. We then consider measurement noise, which degrades engine performance. A naive use of noisy measurements in the feedback algorithm leads to a phase transition at finite signal-to-noise ratio: below the transition, the engine no longer functions. A more sophisticated, `Bayesian' algorithm eliminates the phase transition and improves performance. Finally, operating the information engine in a nonequilibrium environment with extra force fluctuations can enhance the performance by orders of magnitude, even to the point where the energy extracted exceeds that needed to run the information processing. Autonomous implementations of an information engine in such environments could be powered entirely by the additional energy of the bath.
description: 25 pages, 10 figures
Port-Based State Preparation and Applications
Creators: name: Muguruza, Garazi
name: Speelman, Florian
Publisher: name: arXiv
Year: 2024
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We introduce Port-Based State Preparation (PBSP), a teleportation task where Alice holds a complete classical description of the target state and Bob's correction operations are restricted to only tracing out registers. We show a protocol that implements PBSP with error decreasing exponentially in the number of ports, in contrast to the polynomial trade-off for the related task of Port-Based Teleportation, and we prove that this is optimal when a maximally entangled resource state is used.
 As an application, we introduce approximate Universal Programmable Hybrid Processors (UPHP). Here the goal is to encode a unitary as a quantum state, and the UPHP can apply this unitary to a quantum state when knowing its classical description. We give a construction that needs strictly less memory in terms of dimension than the optimal approximate Universal Programmable Quantum Processor achieving the same error. Additionally, we provide lower bounds for the optimal trade-off between memory and error of UPHPs.
description: quantum journal version, minor errors fixed
Microdon mutabilis Linnaeus
Creators: name: Ricarte, Antonio
name: Rotheray, Graham E.
name: Lyszkowski, Richard M.
name: Hancock, E. Geoffrey
name: Hewitt, Stephen M.
name: Watt, Kenneth R.
name: Horsfield, David
name: Macgowan, Iain
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Syrphidae
Microdon
Microdon mutabilis

description: Microdon mutabilis (Linnaeus)
Material examined. Leg. D. Horsfield: 1♂, Moreda valley, herb-rich meadows, 720 m, 23.v.2012 [NMS]. Leg. R.M. Lyszkowski: 1♀, Moreda meadows, 735 m, 23.v.2012 [RL].
description: Published as part of Ricarte, Antonio, Rotheray, Graham E., Lyszkowski, Richard M., Hancock, E. Geoffrey, Hewitt, Stephen M., Watt, Kenneth R., Horsfield, David & Macgowan, Iain, 2014, The syrphids of Serra do Courel, Northern Spain and description of a new Cheilosia Meigen species (Diptera: Syrphidae), pp. 401-422 in Zootaxa 3793 (4) on page 412, DOI: 10.11646/zootaxa.3793.4.1, http://zenodo.org/record/225393
Leptotrombidium (Leptotrombidium) fletcheri
Creators: name: Nielsen, David H.
name: Robbins, Richard G.
name: Rueda, Leopoldo M.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Actinedida
Trombiculidae
Leptotrombidium
Leptotrombidium fletcheri

description: Leptotrombidium (Leptotrombidium) fletcheri (Womersley and Heaslip, 1943):
AUS, ORI
Trombicula fletcheri Womersley and Heaslip, 1943
Leptotrombidium (Leptotrombidium) fletcheri fletcheri, Vercammen-Grandjean & Langston 1976
Leptotrombidium fletcheri, Stekolnikov 2013 [fletcheri group], 2021
Syn.: Leptotrombidium (Leptotrombidium) fletcheri francolini, Wen & Xiang 1984 h
description: Published as part of Nielsen, David H., Robbins, Richard G. & Rueda, Leopoldo M., 2021, Annotated world checklist of the Trombiculidae and Leeuwenhoekiidae (1758 - 2021) (Acari: Trombiculoidea), with notes on nomenclature, taxonomy, and distribution, pp. 1-243 in Zootaxa 4967 (1) on pages 128-129, DOI: 10.11646/zootaxa.4967.1.1, http://zenodo.org/record/4745510
Broken detailed balance and entropy production in directed networks
Creators: name: Nartallo-Kaluarachchi, Ramón
name: Asllani, Malbor
name: Deco, Gustavo
name: Kringelbach, Morten L.
name: Goriely, Alain
name: Lambiotte, Renaud
Publisher: name: arXiv
Year: 2024
Subjects: subject: Physics and Society (physics.soc-ph)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Neurons and Cognition (q-bio.NC)
subject: FOS: Physical sciences
subject: FOS: Biological sciences

description: The structure of a complex network plays a crucial role in determining its dynamical properties. In this work, we show that the the degree to which a network is directed and hierarchically organised is closely associated with the degree to which its dynamics break detailed balance and produce entropy. We consider a range of dynamical processes and show how different directed network features affect their entropy production rate. We begin with an analytical treatment of a 2-node network followed by numerical simulations of synthetic networks using the preferential attachment and Erdös-Renyi algorithms. Next, we analyse a collection of 97 empirical networks to determine the effect of complex real-world topologies. Finally, we present a simple method for inferring broken detailed balance and directed network structure from multivariate time-series and apply our method to identify non-equilibrium dynamics and hierarchical organisation in both human neuroimaging and financial time-series. Overall, our results shed light on the consequences of directed network structure on non-equilibrium dynamics and highlight the importance and ubiquity of hierarchical organisation and non-equilibrium dynamics in real-world systems.
description: 36 pages, 16 figures
Additional file 8: of The dynamic landscape of gene regulation during Bombyx mori oogenesis
Creators: name: Zhang, Qiang
name: Sun, Wei
name: Bang-Yong Sun
name: Xiao, Yang
name: Zhang, Ze
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: The expression profiles of typical genes during oogenesis in D. melanogaster. (A) The expression profiles for typical protein families during oogenesis in D. melanogaster. (B) The expression profiles for ecdysteroid synthesis and metabolism pathways during oogenesis in D. melanogaster. The explanation of gene identities is in the AdditionalÂ file 12. (PDF 655 kb)
Additional file 8: of The dynamic landscape of gene regulation during Bombyx mori oogenesis
Creators: name: Zhang, Qiang
name: Sun, Wei
name: Bang-Yong Sun
name: Xiao, Yang
name: Zhang, Ze
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: The expression profiles of typical genes during oogenesis in D. melanogaster. (A) The expression profiles for typical protein families during oogenesis in D. melanogaster. (B) The expression profiles for ecdysteroid synthesis and metabolism pathways during oogenesis in D. melanogaster. The explanation of gene identities is in the AdditionalÂ file 12. (PDF 655 kb)
Additional file 2: of Genome-wide analysis of WRKY gene family in the sesame genome and identification of the WRKY genes involved in responses to abiotic stresses
Creators: name: Donghua Li
name: Liu, Pan
name: Jingyin Yu
name: Linhai Wang
name: Komivi Dossa
name: Yanxin Zhang
name: Zhou, Rong
name: Wei, Xin
name: Xiurong Zhang
Publisher: name: Figshare
Year: 2017
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Marine Biology
subject: Plant Biology
subject: 60506 Virology

description: Alignment of SiWRKY domain aa sequences. The alignment was performed using Jalview. The conserved WRKY aa and zinc-finger motifs are highlighted in blue. Gaps are indicated by dashes. (PDF 506Â kb)
Deep Common Feature Mining for Efficient Video Semantic Segmentation
Creators: name: Zheng, Yaoyan
name: Yang, Hongyu
name: Huang, Di
Publisher: name: arXiv
Year: 2024
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: Recent advancements in video semantic segmentation have made substantial progress by exploiting temporal correlations. Nevertheless, persistent challenges, including redundant computation and the reliability of the feature propagation process, underscore the need for further innovation. In response, we present Deep Common Feature Mining (DCFM), a novel approach strategically designed to address these challenges by leveraging the concept of feature sharing. DCFM explicitly decomposes features into two complementary components. The common representation extracted from a key-frame furnishes essential high-level information to neighboring non-key frames, allowing for direct re-utilization without feature propagation. Simultaneously, the independent feature, derived from each video frame, captures rapidly changing information, providing frame-specific clues crucial for segmentation. To achieve such decomposition, we employ a symmetric training strategy tailored for sparsely annotated data, empowering the backbone to learn a robust high-level representation enriched with common information. Additionally, we incorporate a self-supervised loss function to reinforce intra-class feature similarity and enhance temporal consistency. Experimental evaluations on the VSPW and Cityscapes datasets demonstrate the effectiveness of our method, showing a superior balance between accuracy and efficiency. The implementation is available at https://github.com/BUAAHugeGun/DCFM.
description: Accepted by IEEE TCSVT
Additional file 2: of Genome-wide analysis of WRKY gene family in the sesame genome and identification of the WRKY genes involved in responses to abiotic stresses
Creators: name: Donghua Li
name: Liu, Pan
name: Jingyin Yu
name: Linhai Wang
name: Komivi Dossa
name: Yanxin Zhang
name: Zhou, Rong
name: Wei, Xin
name: Xiurong Zhang
Publisher: name: Figshare
Year: 2017
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Marine Biology
subject: Plant Biology
subject: Virology

description: Alignment of SiWRKY domain aa sequences. The alignment was performed using Jalview. The conserved WRKY aa and zinc-finger motifs are highlighted in blue. Gaps are indicated by dashes. (PDF 506Â kb)
Myathropa florea Linnaeus
Creators: name: Ricarte, Antonio
name: Rotheray, Graham E.
name: Lyszkowski, Richard M.
name: Hancock, E. Geoffrey
name: Hewitt, Stephen M.
name: Watt, Kenneth R.
name: Horsfield, David
name: Macgowan, Iain
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Syrphidae
Myathropa
Myathropa florea

description: Myathropa florea (Linnaeus)
Material examined. Leg. A. Ricarte: 1♂, meadow along Moreda valley, 720 m, on flowers of Chaerophyllum hirsutum, 29.v.2012 [NMS].
description: Published as part of Ricarte, Antonio, Rotheray, Graham E., Lyszkowski, Richard M., Hancock, E. Geoffrey, Hewitt, Stephen M., Watt, Kenneth R., Horsfield, David & Macgowan, Iain, 2014, The syrphids of Serra do Courel, Northern Spain and description of a new Cheilosia Meigen species (Diptera: Syrphidae), pp. 401-422 in Zootaxa 3793 (4) on page 412, DOI: 10.11646/zootaxa.3793.4.1, http://zenodo.org/record/225393
Böttcher-Wenzel inequality for weighted Frobenius norms and its application to quantum physics
Creators: name: Mayumi, Aina
name: Kimura, Gen
name: Ohno, Hiromichi
name: Chruściński, Dariusz
Publisher: name: arXiv
Year: 2024
Subjects: subject: Mathematical Physics (math-ph)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: By employing a weighted Frobenius norm with a positive matrix $ω$, we introduce natural generalizations of the famous Böttcher-Wenzel (BW) inequality. Based on the combination of the weighted Frobenius norm $\|A\|_ω:= \sqrt{{\rm tr}(A^\ast A ω)}$ and the standard Frobenius norm $\|A\| := \sqrt{{\rm tr}(A^\ast A)}$, there are exactly five possible generalizations, labeled (i) through (v), for the bounds on the norms of the commutator $[A,B]:= AB - BA$. In this paper, we establish the tight bounds for cases (iii) and (v), and propose conjectures regarding the tight bounds for cases (i) and (ii). Additionally, the tight bound for case (iv) is derived as a corollary of case (i). All these bounds (i)-(v) serve as generalizations of the BW inequality. The conjectured bounds for cases (i) and (ii) (and thus also (iv)) are numerically supported for matrices up to size $n=15$. Proofs are provided for $n=2$ and certain special cases. Interestingly, we find applications of these bounds in quantum physics, particularly in the contexts of the uncertainty relation and open quantum dynamics.
description: 18 pages, 2 figures
Additional file 7: of The dynamic landscape of gene regulation during Bombyx mori oogenesis
Creators: name: Zhang, Qiang
name: Sun, Wei
name: Bang-Yong Sun
name: Xiao, Yang
name: Zhang, Ze
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Pharmacology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: The morphological changes of ovaries following hormone and inhibitor treatments. (A-C) The morphological changes observed following the 20E, 30% alcohol and RH-5992 treatments, respectively. (D-G) The morphological changes in the DMSO control and various inhibitors of insulin pathways, LY294002, U0126 and Rapamycin, respectively. (H-I) The quantitative PCR expression results of typical marker genes. The explanation of gene identities is in the AdditionalÂ file 12. (PDF 14262 kb)
DeRO: Dead Reckoning Based on Radar Odometry With Accelerometers Aided for Robot Localization
Creators: name: Do, Hoang Viet
name: Kim, Yong Hun
name: Lee, Joo Han
name: Lee, Min Ho
name: Song, Jin Woo
Publisher: name: arXiv
Year: 2024
Subjects: subject: Robotics (cs.RO)
subject: Signal Processing (eess.SP)
subject: FOS: Computer and information sciences
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: I.2.9

description: In this paper, we propose a radar odometry structure that directly utilizes radar velocity measurements for dead reckoning while maintaining its ability to update estimations within the Kalman filter framework. Specifically, we employ the Doppler velocity obtained by a 4D Frequency Modulated Continuous Wave (FMCW) radar in conjunction with gyroscope data to calculate poses. This approach helps mitigate high drift resulting from accelerometer biases and double integration. Instead, tilt angles measured by gravitational force are utilized alongside relative distance measurements from radar scan matching for the filter's measurement update. Additionally, to further enhance the system's accuracy, we estimate and compensate for the radar velocity scale factor. The performance of the proposed method is verified through five real-world open-source datasets. The results demonstrate that our approach reduces position error by 62% and rotation error by 66% on average compared to the state-of-the-art radar-inertial fusion method in terms of absolute trajectory error.
description: 9 pages, 5 figures, 1 table, IROS 2024
Additional file 1: of Genome-wide analysis of WRKY gene family in the sesame genome and identification of the WRKY genes involved in responses to abiotic stresses
Creators: name: Donghua Li
name: Liu, Pan
name: Jingyin Yu
name: Linhai Wang
name: Komivi Dossa
name: Yanxin Zhang
name: Zhou, Rong
name: Wei, Xin
name: Xiurong Zhang
Publisher: name: Figshare
Year: 2017
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Synteny of subgenomes in the sesame. The green bars represent the sesame chromosomes. The numbers 01â  16 represent LGs within the sesame genome. Black lines on the green bars indicate the locations of sesame genes within the LGs. Colored lines indicate subgenomes in sesame (PDF 1332Â kb)
Neoascia annexa Mueller
Creators: name: Ricarte, Antonio
name: Rotheray, Graham E.
name: Lyszkowski, Richard M.
name: Hancock, E. Geoffrey
name: Hewitt, Stephen M.
name: Watt, Kenneth R.
name: Horsfield, David
name: Macgowan, Iain
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Syrphidae
Neoascia
Neoascia annexa

description: Neoascia annexa (Mueller)
Material examined. Leg. A. Ricarte: 1♂, meadow along Moreda valley, 720 m, 28.v.2012 [NMS].
description: Published as part of Ricarte, Antonio, Rotheray, Graham E., Lyszkowski, Richard M., Hancock, E. Geoffrey, Hewitt, Stephen M., Watt, Kenneth R., Horsfield, David & Macgowan, Iain, 2014, The syrphids of Serra do Courel, Northern Spain and description of a new Cheilosia Meigen species (Diptera: Syrphidae), pp. 401-422 in Zootaxa 3793 (4) on page 412, DOI: 10.11646/zootaxa.3793.4.1, http://zenodo.org/record/225393
Stable tree expressions with Omega-classes and Double Ramification cycles
Creators: name: Blot, Xavier
name: Lewański, Danilo
name: Rossi, Paolo
name: Shadrin, Sergei
Publisher: name: arXiv
Year: 2024
Subjects: subject: Algebraic Geometry (math.AG)
subject: Mathematical Physics (math-ph)
subject: FOS: Mathematics
subject: FOS: Physical sciences

description: We propose a new system of conjectural relations in the tautological ring of the moduli space of curves involving stable rooted trees with level structure decorated by Hodge and Ω-classes and prove these conjectures in different cases.
Additional file 7: of The dynamic landscape of gene regulation during Bombyx mori oogenesis
Creators: name: Zhang, Qiang
name: Sun, Wei
name: Bang-Yong Sun
name: Xiao, Yang
name: Zhang, Ze
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Pharmacology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: The morphological changes of ovaries following hormone and inhibitor treatments. (A-C) The morphological changes observed following the 20E, 30% alcohol and RH-5992 treatments, respectively. (D-G) The morphological changes in the DMSO control and various inhibitors of insulin pathways, LY294002, U0126 and Rapamycin, respectively. (H-I) The quantitative PCR expression results of typical marker genes. The explanation of gene identities is in the AdditionalÂ file 12. (PDF 14262 kb)
On the Development of an RFSoC-Based Ultra-Fast Phasemeter With GHz Bandwidth
Creators: name: Subrahmanya, Shreevathsa Chalathadka
name: Darsow-Fromm, Christian
name: Gerberding, Oliver
Publisher: name: arXiv
Year: 2024
Subjects: subject: Instrumentation and Detectors (physics.ins-det)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Precise measurements of the frequency and phase of an electrical or optical signal play a key role in various branches of science and engineering. Tracking changing laser frequencies is especially demanding when the lasers themselves are noisy or if the frequencies rapidly change because they encode highly dynamic signals in, e.g., Doppler-ranging or dynamic cavity readout. Here, to address these and other possible applications, we report the development of a high signal bandwidth (> 2 GHz) and high tracking bandwidth (2 MHz) multi-channel Phasemeter. The implementation utilizes an all-digital phase-locked loop realized within the field programmable gate array (FPGA) part of a radio frequency system-on-chip (RFSoC), the programmable logic (PL). The new features of the phasemeter are obtained by operating the PL at its timing limits and introducing a multi-demodulation and phase accumulation scheme. We present performance measurements, discuss the role of the high tracking bandwidth for tracking highly dynamic signals, and demonstrate ultra-stable phase locking of a beat note between two widely tunable external cavity diode lasers. We achieve a phase-noise floor in the sub-milli radian regime when comparing two signals, even for GHz frequencies, and demonstrate stable tracking of signals with a frequency change rate of 240 GHz/s.
description: Copyright 2024 The Authors. This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License. For more information, see https://creativecommons.org/licenses/by-nc-nd/4.0/
Neocnemodon brevidens Egger
Creators: name: Ricarte, Antonio
name: Rotheray, Graham E.
name: Lyszkowski, Richard M.
name: Hancock, E. Geoffrey
name: Hewitt, Stephen M.
name: Watt, Kenneth R.
name: Horsfield, David
name: Macgowan, Iain
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Syrphidae
Neocnemodon
Neocnemodon brevidens

description: Neocnemodon brevidens (Egger) #
Material examined. Leg. A. Ricarte: 1♂, meadow along Moreda valley, 720 m, 28.v.2012 [NMS].
description: Published as part of Ricarte, Antonio, Rotheray, Graham E., Lyszkowski, Richard M., Hancock, E. Geoffrey, Hewitt, Stephen M., Watt, Kenneth R., Horsfield, David & Macgowan, Iain, 2014, The syrphids of Serra do Courel, Northern Spain and description of a new Cheilosia Meigen species (Diptera: Syrphidae), pp. 401-422 in Zootaxa 3793 (4) on page 412, DOI: 10.11646/zootaxa.3793.4.1, http://zenodo.org/record/225393
Paragus (Pandasyopthalmus) haemorrhous Meigen
Creators: name: Ricarte, Antonio
name: Rotheray, Graham E.
name: Lyszkowski, Richard M.
name: Hancock, E. Geoffrey
name: Hewitt, Stephen M.
name: Watt, Kenneth R.
name: Horsfield, David
name: Macgowan, Iain
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Syrphidae
Paragus
Paragus haemorrhous

description: Paragus (Pandasyopthalmus) haemorrhous Meigen
Material examined. Leg. SM. Hewitt: 1♀, Devesa da Rogueira, 20.v.2012 [CALMG].
description: Published as part of Ricarte, Antonio, Rotheray, Graham E., Lyszkowski, Richard M., Hancock, E. Geoffrey, Hewitt, Stephen M., Watt, Kenneth R., Horsfield, David & Macgowan, Iain, 2014, The syrphids of Serra do Courel, Northern Spain and description of a new Cheilosia Meigen species (Diptera: Syrphidae), pp. 401-422 in Zootaxa 3793 (4) on page 412, DOI: 10.11646/zootaxa.3793.4.1, http://zenodo.org/record/225393
Leptotrombidium (Leptotrombidium) flureli Vercammen-Grandjean and Langston 1976
Creators: name: Nielsen, David H.
name: Robbins, Richard G.
name: Rueda, Leopoldo M.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Actinedida
Trombiculidae
Leptotrombidium
Leptotrombidium flureli

description: Leptotrombidium (Leptotrombidium) flureli Vercammen-Grandjean and Langston, 1976:
PAL
Leptotrombidium flureli, Stekolnikov 2013 [flureli group]
description: Published as part of Nielsen, David H., Robbins, Richard G. & Rueda, Leopoldo M., 2021, Annotated world checklist of the Trombiculidae and Leeuwenhoekiidae (1758 - 2021) (Acari: Trombiculoidea), with notes on nomenclature, taxonomy, and distribution, pp. 1-243 in Zootaxa 4967 (1) on page 129, DOI: 10.11646/zootaxa.4967.1.1, http://zenodo.org/record/4745510
title: 54. Deutsche Pflanzenschutztagung: in Hamburg, 20. - 23. September 2004
title: Vierundfünfzigste
titleType: AlternativeTitle
Creators: name: :None
Publisher: name: Biologische Bundesanstalt für Land- und Forstwirtschaft
Year: 2004
Subjects: subject: Pflanzenschutz
subject: Plants, Protection ofCongresses
subject: Protection of Congresses Germany
subject: 630

description: Mitteilungen aus der Biologischen Bundesanstalt für Land- und Forstwirtschaft, Berlin-Dahlem, vol. 396
Polarization Dynamics in Paramagnet of Charged Quark-Gluon Plasma
Creators: name: Dong, Lihua
name: Lin, Shu
Publisher: name: arXiv
Year: 2024
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: It is commonly understood that the strong magnetic field produced in heavy ion collisions is short-lived. The electric conductivity of the quark-gluon plasma is unable to significantly extend the life time of magnetic field. We propose an alternative scenario to achieve this: with finite baryon density and spin polarization by the initial magnetic field, the quark-gluon plasma behaves as a paramagnet, which may continue to polarize quark after fading of initial magnetic field. We confirm this picture by calculations in both quantum electrodynamics and quantum chromodynamics. In the former case, we find a splitting in the damping rates of probe fermion with opposite spin component along the magnetic field. In the latter case, we find a similar splitting in damping rate of probe quark in quark-gluon plasma in both high density and low density limits. The splitting provides a way of polarizing strange quarks by the quark-gluon plasma paramagnet consisting of light quarks, which effectively extends the lifetime of magnetic field in heavy ion collisions.
Dynamical systems analysis of a cosmological model with interacting Umami Chaplygin fluid in adiabatic particle creation mechanism: Some bouncing features
Creators: name: Mandal, Goutam
name: Biswas, Sujay Kr.
Publisher: name: arXiv
Year: 2024
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: The present work aims to investigate an interacting Umami Chaplygin gas in the background dynamics of a spatially flat Friedmann-Lemaitre-Robertson-Walker (FLRW) universe when adiabatic particle creation is allowed. Here, the universe is taken to be an open thermodynamical model where the particle is created irreversibly and consequently, the creation pressure comes into the energy-momentum tensor of the material content. The particle creation rate is assumed to have a linear relationship with the Hubble parameter ($Γ\propto H$) and the created particle is dark matter (pressureless). With this creation rate a single fluid model studied and found no phase transition. Then, we studied an interacting two-fluid model where second fluid is taken as perfect fluid equation of state and late-time acceleration is obtained. Next, interacting Umami chaplygin gas is studied in context of particle creation. Dynamical stability of the model is performed. Classical stability of the model is also studied at each critical point. Some critical points exhibit the accelerated de Sitter expansion of the universe at both the early phase as well as the late phase of evolution which is characterized by completely Umami Chaplygin fluid equation of state. Scaling solutions are also described by some other critical points showing late-time accelerated attractors in phase space satisfying present observational data, and solving the coincidence problem. In a specific region of parameters, a sequence of critical points is achieved exhibiting a unified cosmic evolution of the universe starting from early inflation (source point), which is followed by a decelerated intermediate phase (saddle solution), and finally goes through the late-time dark energy dominated universe (stable point). Finally, non-singular bouncing behavior of the universe is also investigated for this model numerically.
description: 40 pages, 15 captioned figures, accepted for publication in Classical and Quantum Gravity
Paragus (Paragus) bicolor Fabricius
Creators: name: Ricarte, Antonio
name: Rotheray, Graham E.
name: Lyszkowski, Richard M.
name: Hancock, E. Geoffrey
name: Hewitt, Stephen M.
name: Watt, Kenneth R.
name: Horsfield, David
name: Macgowan, Iain
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Syrphidae
Paragus
Paragus bicolor

description: Paragus (Paragus) bicolor (Fabricius)
Material examined. Leg. A. Ricarte: 1♂, LU-4501 road, edge vegetation, 1030 m, 28.v.2012 [NMS].
description: Published as part of Ricarte, Antonio, Rotheray, Graham E., Lyszkowski, Richard M., Hancock, E. Geoffrey, Hewitt, Stephen M., Watt, Kenneth R., Horsfield, David & Macgowan, Iain, 2014, The syrphids of Serra do Courel, Northern Spain and description of a new Cheilosia Meigen species (Diptera: Syrphidae), pp. 401-422 in Zootaxa 3793 (4) on page 412, DOI: 10.11646/zootaxa.3793.4.1, http://zenodo.org/record/225393
Click to Grasp: Zero-Shot Precise Manipulation via Visual Diffusion Descriptors
Creators: name: Tsagkas, Nikolaos
name: Rome, Jack
name: Ramamoorthy, Subramanian
name: Mac Aodha, Oisin
name: Lu, Chris Xiaoxuan
Publisher: name: arXiv
Year: 2024
Subjects: subject: Robotics (cs.RO)
subject: Artificial Intelligence (cs.AI)
subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: Precise manipulation that is generalizable across scenes and objects remains a persistent challenge in robotics. Current approaches for this task heavily depend on having a significant number of training instances to handle objects with pronounced visual and/or geometric part ambiguities. Our work explores the grounding of fine-grained part descriptors for precise manipulation in a zero-shot setting by utilizing web-trained text-to-image diffusion-based generative models. We tackle the problem by framing it as a dense semantic part correspondence task. Our model returns a gripper pose for manipulating a specific part, using as reference a user-defined click from a source image of a visually different instance of the same object. We require no manual grasping demonstrations as we leverage the intrinsic object geometry and features. Practical experiments in a real-world tabletop scenario validate the efficacy of our approach, demonstrating its potential for advancing semantic-aware robotics manipulation. Web page: https://tsagkas.github.io/click2grasp
description: 8 pages, 4 figures
Joint-measurability and quantum communication with untrusted devices
Creators: name: Masini, Michele
name: Ioannou, Marie
name: Brunner, Nicolas
name: Pironio, Stefano
name: Sekatski, Pavel
Publisher: name: arXiv
Year: 2024
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Photon loss represents a major challenge for the implementation of quantum communication protocols with untrusted devices, e.g. in the device-independent (DI) or semi-DI approaches. Determining critical loss thresholds is usually done in case-by-case studies. In the present work, we develop a general framework for characterizing the admissible levels of loss and noise in a wide range of scenarios and protocols with untrusted measurement devices. In particular, we present general bounds that apply to prepare-and-measure protocols for the semi-DI approach, as well as to Bell tests for DI protocols. A key step in our work is to establish a general connection between quantum protocols with untrusted measurement devices and the fundamental notions of channel extendibility and joint-measurability, which capture essential aspects of the communication and measurement of quantum information. In particular, this leads us to introduce the notion of partial joint-measurability, which naturally arises within quantum cryptography.
Paragus (Paragus) pecchiolii Rondani
Creators: name: Ricarte, Antonio
name: Rotheray, Graham E.
name: Lyszkowski, Richard M.
name: Hancock, E. Geoffrey
name: Hewitt, Stephen M.
name: Watt, Kenneth R.
name: Horsfield, David
name: Macgowan, Iain
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Syrphidae
Paragus
Paragus pecchiolii

description: Paragus (Paragus) pecchiolii Rondani
Material examined. Leg. D. Horsfield: 1♂, Moreda, 28.v.2012, brooms and herb-rich vegetation (Ruta 1), 1050 m; 1♀, Seoane, Estación Científica, road edge vegetation, 610 m, 22.v.2012 [NMS].
description: Published as part of Ricarte, Antonio, Rotheray, Graham E., Lyszkowski, Richard M., Hancock, E. Geoffrey, Hewitt, Stephen M., Watt, Kenneth R., Horsfield, David & Macgowan, Iain, 2014, The syrphids of Serra do Courel, Northern Spain and description of a new Cheilosia Meigen species (Diptera: Syrphidae), pp. 401-422 in Zootaxa 3793 (4) on page 412, DOI: 10.11646/zootaxa.3793.4.1, http://zenodo.org/record/225393
Paragus strigatus Meigen
Creators: name: Ricarte, Antonio
name: Rotheray, Graham E.
name: Lyszkowski, Richard M.
name: Hancock, E. Geoffrey
name: Hewitt, Stephen M.
name: Watt, Kenneth R.
name: Horsfield, David
name: Macgowan, Iain
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Syrphidae
Paragus
Paragus strigatus

description: Paragus strigatus Meigen
Material examined. Leg. R.M. Lyszkowski: 1♀, Alto do Couto, 1320 m, 26.v.2012 [RL].
description: Published as part of Ricarte, Antonio, Rotheray, Graham E., Lyszkowski, Richard M., Hancock, E. Geoffrey, Hewitt, Stephen M., Watt, Kenneth R., Horsfield, David & Macgowan, Iain, 2014, The syrphids of Serra do Courel, Northern Spain and description of a new Cheilosia Meigen species (Diptera: Syrphidae), pp. 401-422 in Zootaxa 3793 (4) on page 412, DOI: 10.11646/zootaxa.3793.4.1, http://zenodo.org/record/225393
Thin accretion disk and shadow of Kerr-Sen black hole in Einstein-Maxwell-dilaton-axion gravity
Creators: name: Feng, Haiyuan
name: Yang, Rong-Jia
name: Chen, Wei-Qiang
Publisher: name: arXiv
Year: 2024
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We investigate the thin disk and shadow of Kerr-Sen black hole in Einstein-Maxwell-dilaton-axion gravity. The results reveal that as the dilaton parameter $r_2$ increase, the energy flux, the radiation temperature, the spectra luminosity, and the radiative efficiency of the disk all increase. By narrowing down the dilaton parameter range to $0\leqslant \frac{r_2}{M}\leqslant0.4$, we discover that in the high-frequency region, the Kerr-Sen black hole demonstrates higher energy output compared to the Kerr black hole. We also investigated the shadow of Kerr-Sen black hole in a uniform plasma environment. For fixed inclination angle, dilaton, and spin parameters, the shadow increases as the homogeneous plasma parameter $k$ increases. Conversely, when $k $ and $a$ are fixed, an increase in $r_2$ leads to a decrease in the shadow. Finally, we constrain the model parameters with observational data from M87* and Sgr A*.
description: 32 pages,27 figures
Additional file 2: Figure S1. of Integrated application of transcriptomics and metabolomics provides insights into glycogen content regulation in the Pacific oyster Crassostrea gigas
Creators: name: Busu Li
name: Song, Kai
name: Meng, Jie
name: Li, Li
name: Guofan Zhang
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Plant Biology

description: Pipeline for transcriptome analysis. (PDF 195Â kb)
Parasyrphus nigritarsis Zetterstedt
Creators: name: Ricarte, Antonio
name: Rotheray, Graham E.
name: Lyszkowski, Richard M.
name: Hancock, E. Geoffrey
name: Hewitt, Stephen M.
name: Watt, Kenneth R.
name: Horsfield, David
name: Macgowan, Iain
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Syrphidae
Parasyrphus
Parasyrphus nigritarsis

description: Parasyrphus nigritarsis (Zetterstedt)
Material examined. Leg. D. Horsfield: 1♂, Summit Formigueiros, among Erica and broom, 1639m, 29.v.2012 [NMS]. Leg. E.G. Hancock: 2♂, Formigueiros, 1639m, 29.v.2012 [HM]. Leg. S.M. Hewitt: 1♂, Formigueiros, 23.v.2012, [CALMG].
description: Published as part of Ricarte, Antonio, Rotheray, Graham E., Lyszkowski, Richard M., Hancock, E. Geoffrey, Hewitt, Stephen M., Watt, Kenneth R., Horsfield, David & Macgowan, Iain, 2014, The syrphids of Serra do Courel, Northern Spain and description of a new Cheilosia Meigen species (Diptera: Syrphidae), pp. 401-422 in Zootaxa 3793 (4) on page 412, DOI: 10.11646/zootaxa.3793.4.1, http://zenodo.org/record/225393
Defect conformal field theory from Sachdev-Ye-Kitaev interactions
Creators: name: Ge, Yang
name: Jian, Shao-Kai
Publisher: name: arXiv
Year: 2024
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: High Energy Physics - Theory (hep-th)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The coupling between defects and extended critical degrees of freedom gives rise to the intriguing theory known as defect conformal field theory (CFT). In this work, we introduce a novel family of boundary and interface CFTs by coupling $N$ Majorana chains with SYK$_q$ interactions at the defect. Our analysis reveals that the interaction with $q=2$ constitutes a new marginal defect. Employing a versatile saddle-point method, we compute unique entanglement characterizations, including the $g$ function and effective central charge, of the defect CFT. Furthermore, we analytically evaluate the transmission coefficient using CFT techniques. Surprisingly, the transmission coefficient deviates from the universal relation with the effective central charge across the defect at the large $N$ limit, suggesting that our defect CFT extends beyond all known examples of Gaussian defect CFT.
description: 20 pages, 7 figures. Updated to published version
Complexity of emerging magnetic flux during lifetime of solar ephemeral regions
Creators: name: Yang, Hanlin
name: Jin, Chunlan
name: Wang, Zifan
name: Wang, Jingxiu
Publisher: name: arXiv
Year: 2024
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: As a relatively active region, ephemeral region (ER) exhibits highly complex pattern of magnetic flux emergence. We aim to study detailed secondary flux emergences (SFEs) which we define as bipoles that they appear close to ERs and finally coalesce with ERs after a period. We study the SFEs during the whole process from emergence to decay of 5 ERs observed by the Helioseismic and Magnetic Imager (HMI) aboard Solar Dynamics Observatory (SDO) . The maximum unsigned magnetic flux for each ER is around $10^{20}$ Mx. Each ER has tens of SFEs with an average emerging magnetic flux of approximately 5$\times10^{18}$ Mx. The frequency of normalized magnetic flux for all the SFEs follows a power law distribution with an index of -2.08 . The majority of SFEs occur between the positive and negative polarities of ER , and their growth time is concentrated within one hour. The magnetic axis of SFE is found to exhibit a random distribution in the 5 ERs. We suggest that the relationship between SFEs and ERs can be understood by regarding the photospheric magnetic field observations as cross-sections of an emerging magnetic structure. Tracking the ERs' evolution, we propose that these SFEs in ERs may be sequent emergences from the bundle of flux tube of ERs, and that SFEs are partially emerged $Ω$-loops.
description: 12 pages, 9 figures, 1 table and accepted for publication in the Astrophysical Journal
Potential of light-cone sum rules without semiglobal quark-hadron duality
Creators: name: Carvunis, A.
name: Mahmoudi, F.
name: Monceaux, Y.
Publisher: name: arXiv
Year: 2024
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: This work addresses the calculation of local form factors involved in the theoretical predictions of semileptonic $B$-meson decays at low $q^2$. We present a new approach to the method of QCD light-cone sum rule with $B$-meson light-cone distribution amplitudes. In our strategy, we bypass the semiglobal quark-hadron duality (QHD) approximation which usually contributes an unknown and potentially large systematic error to the prediction of form factors. We trade this improvement for an increased reliance on higher-order contributions in perturbation theory. Unlike the systematic error from semiglobal QHD, truncation errors are assessable and systematically improvable, hence allowing robust predictions of form factors. For the transitions $B\to π,ρ,K^{(*)}$, our predictions agree with the literature for all form factors at $q^2=0$.
description: 36 pages, 6 figures, 7 tables. v3: Includes updated bibliography and minor additions in the text. Matches the published version in PRD