cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Explosive Nucleosynthesis in Near-Chandrasekhar Mass White Dwarf Models for Type Ia Supernovae: Dependence on Model Parameters
Creators: name: Leung, Shing-Chi
name: Nomoto, Ken'ichi
Publisher: name: arXiv
Year: 2017
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: We present two-dimensional hydrodynamics simulations of near-Chandrasekhar mass white dwarf (WD) models for Type Ia supernovae (SNe Ia) using the turbulent deflagration model with deflagration-detonation transition (DDT). We perform a parameter survey for 41 models to study the effects of the initial central density (i.e., WD mass), metallicity, flame shape, DDT criteria, and turbulent flame formula for a much wider parameter space than earlier studies. The final isotopic abundances of $^{11}$C to $^{91}$Tc in these simulations are obtained by post-process nucleosynthesis calculations. The survey includes SNe Ia models with the central density from $5 \times 10^8$ g cm$^{-3}$ to $5 \times 10^9$ g cm$^{-3}$ (WD masses of 1.30 - 1.38 $M_\odot$), metallicity from 0 to 5 $Z_{\odot}$, C/O mass ratio from 0.3 - 1.0 and ignition kernels including centered and off-centered ignition kernels. We present the yield tables of stable isotopes from $^{12}$C to $^{70}$Zn as well as the major radioactive isotopes for 33 models. Observational abundances of $^{55}$Mn, $^{56}$Fe, $^{57}$Fe and $^{58}$Ni obtained from the solar composition, well-observed SNe Ia and SN Ia remnants are used to constrain the explosion models and the supernova progenitor. The connection between the pure turbulent deflagration model and the subluminous SNe Iax is discussed. We find that dependencies of the nucleosynthesis yields on the metallicity and the central density (WD mass) are large. To fit these observational abundances and also for the application of galactic chemical evolution modeling, these dependencies on the metallicity and WD mass should be taken into account.
description: 53 pages, 43 figures. Accepted for publication in Astrophysical Journal. Tables and figures updated to be consistent with other works. Also table magnified for better vision
Mochizuki-Trooshin type theorem for Sturm-Liouville problem on time scales
Creators: name: Adalar, İbrahim
name: Ozkan, A. Sinan
Publisher: name: arXiv
Year: 2019
Subjects: subject: Classical Analysis and ODEs (math.CA)
subject: Spectral Theory (math.SP)
subject: FOS: Mathematics

description: In this paper, we consider an interior inverse Sturm-Liouville problem on time scale T and give a Mochizuki-Trooshin type theorem.
Additional file 10 of Splicing factor SRSF1 promotes breast cancer progression via oncogenic splice switching of PTPMT1
Creators: name: Du, Jun-Xian
name: Luo, Yi-Hong
name: Zhang, Si-Jia
name: Wang, Biao
name: Chen, Cong
name: Zhu, Gui-Qi
name: Zhu, Ping
name: Cai, Cheng-Zhe
name: Wan, Jing-Lei
name: Cai, Jia-Liang
name: Chen, Shi-Ping
name: Dai, Zhi
name: Zhu, Wei
Publisher: name: figshare
Year: 2021
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Computational Biology

description: Additional file 10: Supplementary Table 6
Weak saturation and weak amalgamation property
Creators: name: Di Liberti, Ivan
Publisher: name: arXiv
Year: 2017
Subjects: subject: Category Theory (math.CT)
subject: Logic (math.LO)
subject: FOS: Mathematics

description: The two model-theoretic concepts of weak saturation and weak amalgamation property are studied in the context of accessible categories. We relate these two concepts providing sufficient conditions for existence and uniqueness of weakly saturated objects of an accessible category K. We discuss the implications of this fact in classical model theory.
description: 9 pages
Amplitude recursions with an extra marked point
Creators: name: Broedel, Johannes
name: Kaderli, Andre
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Number Theory (math.NT)
subject: FOS: Physical sciences
subject: FOS: Mathematics
subject: 81T30, 14D05

description: The recursive calculation of Selberg integrals by Aomoto and Terasoma using the Knizhnik-Zamolodchikov equation and the Drinfeld associator makes use of an auxiliary point and facilitates the recursive evaluation of string amplitudes at genus zero: open-string N-point amplitudes can be obtained from those at N-1 points. We establish a similar formalism at genus one, which allows the recursive calculation of genus-one Selberg integrals using an extra marked point in a differential equation of Knizhnik-Zamolodchikov-Bernard type. Hereby genus-one Selberg integrals are related to genus-zero Selberg integrals. Accordingly, N-point open-string amplitudes at genus one can be obtained from (N+2)-point open-string amplitudes at tree level. The construction is related to and in accordance with various recent results in intersection theory and string theory.
description: v2: replaced with published version
Concluding Henrietta Leavitt's Work on Classical Cepheids in the Magellanic System and Other Updates of the OGLE Collection of Variable Stars
Creators: name: Soszyński, I.
name: Udalski, A.
name: Szymański, M. K.
name: Wyrzykowski, Ł.
name: Ulaczyk, K.
name: Poleski, R.
name: Pietrukowicz, P.
name: Kozlowski, S.
name: Skowron, D.
name: Skowron, J.
name: Mróz, P.
name: Pawlak, M.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: More than a century ago, Henrietta Leavitt discovered the first Cepheids in the Magellanic Clouds together with the famous period-luminosity relationship revealed by these stars, which soon after revolutionized our view of the Universe. Over the years, the number of known Cepheids in these galaxies has steadily increased with the breakthrough in the last two decades thanks to the new generation of large-scale long-term sky variability surveys. Here we present the final upgrade of the OGLE Collection of Cepheids in the Magellanic System which already contained the vast majority of known Cepheids. The updated collection now comprises 9649 classical and 262 anomalous Cepheids. Type-II Cepheids will be updated shortly. Thanks to high completeness of the OGLE survey the sample of classical Cepheids includes virtually all stars of this type in the Magellanic Clouds. Thus, the OGLE survey concludes the work started by Leavitt. Additionally, the OGLE sample of RR Lyrae stars in the Magellanic System has been updated. It now counts 46 443 variables. A collection of seven anomalous Cepheids in the halo of our Galaxy detected in front of the Magellanic Clouds is also presented. OGLE photometric data are available to the astronomical community from the OGLE Internet Archive. The time-series photometry of all pulsating stars in the OGLE Collection has been supplemented with new observations.
description: 11 pages, 3 figures
Planar Thermal Hall Effect in Weyl Semimetals
Creators: name: Nandy, S.
name: Taraphder, A.
name: Tewari, Sumanta
Publisher: name: arXiv
Year: 2017
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Weyl semimetals are intriguing topological states of matter that support various anomalous magneto-transport phenomena. One such phenomenon is a negative longitudinal ($\mathbf{\nabla} T \parallel \mathbf{B}$) magneto-thermal resistivity, which arises due to chiral magnetic effect (CME). In this paper we show that another fascinating effect induced by CME is the planar thermal Hall effect (PTHE), i.e., appearance of an in-plane transverse temperature gradient when the current due to $\mathbf{\nabla} T$ and the magnetic field $\mathbf{B}$ are not aligned with each other. Using semiclassical Boltzmann transport formalism in the relaxation time approximation we compute both longitudinal magneto-thermal conductivity (LMTC) and planar thermal Hall conductivity (PTHC) for a time reversal symmetry breaking WSM. We find that both LMTC and PTHC are quadratic in B in type-I WSM whereas each follows a linear-B dependence in type-II WSM in a configuration where $\mathbf{\nabla} T$ and B are applied along the tilt direction. In addition, we investigate the Wiedemann-Franz law for an inversion symmetry broken WSM (e.g., WTe$_{2}$) and find that this law is violated in these systems due to both chiral anomaly and CME.
description: 9 pages, 5 figures Version accepted in Phys. Rev. B
Measurement of resistance coefficients of pendulum motion with balls of various sizes
Creators: name: Lee, Kyung-Ryul
name: Ju, Young-Gu
Publisher: name: arXiv
Year: 2020
Subjects: subject: Physics Education (physics.ed-ph)
subject: Classical Physics (physics.class-ph)
subject: FOS: Physical sciences

description: In order to obtain the damping and resistance coefficients of a pendulum, we constructed an optical system containing a photogate for measuring the speed of the pendulum at the lowest point of motion. The photogate consisted of a photoresistor, a laser, a mechanical body, and a pendulum ball. A 3D printer was used to produce the mechanical body and pendulum balls of various sizes. Furthermore, we used Arduino to automate measurement of the speed at the lowest point of motion and increase the precision. We found that the resistance coefficient was proportional to the size of the balls, regardless of the ball mass, in agreement with the drag equation for a small Reynolds number.
description: 20 pages, 7 figures
title: ADCO, Cartulaire de Cîteaux dit Cartularium Vetus (milieu XIIIe siècle) et Notices du XIIe siècle, Cart. 169 (11 H 63), f. 0102r
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2011
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Chartes de la Bourgogne du Moyen Âge
subject: cartulaire
subject: LaMOP
subject: Corpus Burgundiae Medii Aevi
subject: Laboratoire de Médiévistique Occidentale de Paris

description: Cartulaire de Cîteaux dit Cartularium Vetus (milieu XIIIe siècle) et Notices du XIIe siècle, Archives départementales de la Côte-d'Or, Cart. 169 (11 H 63), f. 0102r, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire de Cîteaux dit Cartularium Vetus (milieu XIIIe siècle) et Notices du XIIe siècle, Archives départementales de la Côte-d'Or, Cart. 169 (11 H 63), f. 0102r, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
Additional file 4: of The Cambridge Prognostic Groups for improved prediction of disease mortality at diagnosis in primary non-metastatic prostate cancer: a validation study
Creators: name: V. Gnanapragasam
name: O. Bratt
name: K. Muir
name: L. Lee
name: H. Huang
name: P. Stattin
name: A. Lophatananon
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Cell Biology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: Computational Biology

description: Table S4. Distribution of the Singapore study cohort (n = 2550) by age, PSA at presentation, biopsy Grade Group (GG) and clinical stage (PSA in ng/ml). (DOCX 15 kb)
Fiber-coupled pillar array as a highly pure and stable single-photon source
Creators: name: Odashima, Satoru
name: Sasakura, Hirotaka
name: Nakajima, Hideaki
name: Kumano, Hidekazu
Publisher: name: arXiv
Year: 2017
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: A highly pure and stable single-photon source is prepared that comprises a well-designed pillar array in which each pillar contains only a few InAs quantum dots. A nano-pillar in this array is in direct contact with a fiber end surface and cooled in a liquid-He bath. Auto-correlation measurement shows that this source provides an average $g^{(2)}(0)$ value of 0.0174 in the measured excitation-power range. This photon source and fiber coupling are quite rigid against external disturbances such as cooling-heating cycles and vibration, with long-term stability.
description: 16 pages, 5 figures
Microscope Projection Photolithography Based on Liquid Crystal Microdisplay
Creators: name: Ju, Young-Gu
name: Kim, Hyeon-Jun
name: Ko, Young-Min
Publisher: name: arXiv
Year: 2020
Subjects: subject: Physics Education (physics.ed-ph)
subject: FOS: Physical sciences

description: We developed a microdisplay-based microscope projection photolithography (MDMPP) technique in which a liquid crystal (LC) microdisplay is used as a reconfigurable photomask for a microscope projector. The LC microdisplay provides a significant advantage in terms of cost and speed since patterns can be generated through software instead of redesigning and fabricating glass photomasks. The constructed MDMPP system could produce line patterns as narrow as 2.4 um, smaller than that specified by the diffraction limit, with the aid of a 4X objective lens. The achievement of a linewidth smaller than the theoretical limit may be ascribed to a combination of overexposure and the underetching effect, in addition to the good optical performance of the system. In a diffraction experiment performed with fabricated slits, the application of the MDMPP technique helped provide various patterns of the slits, demonstrating the potential usefulness of the MDMPP system in undergraduate optics courses. We expect that MDMPP can contribute to the field of physics education and various areas of research, such as chemistry and biology, in the future.
description: 14 pages, 8 figures, 6 tables
TeCNO: Surgical Phase Recognition with Multi-Stage Temporal Convolutional Networks
Creators: name: Czempiel, Tobias
name: Paschali, Magdalini
name: Keicher, Matthias
name: Simson, Walter
name: Feussner, Hubertus
name: Kim, Seong Tae
name: Navab, Nassir
Publisher: name: arXiv
Year: 2020
Subjects: subject: Image and Video Processing (eess.IV)
subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Machine Learning (cs.LG)
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: FOS: Computer and information sciences

description: Automatic surgical phase recognition is a challenging and crucial task with the potential to improve patient safety and become an integral part of intra-operative decision-support systems. In this paper, we propose, for the first time in workflow analysis, a Multi-Stage Temporal Convolutional Network (MS-TCN) that performs hierarchical prediction refinement for surgical phase recognition. Causal, dilated convolutions allow for a large receptive field and online inference with smooth predictions even during ambiguous transitions. Our method is thoroughly evaluated on two datasets of laparoscopic cholecystectomy videos with and without the use of additional surgical tool information. Outperforming various state-of-the-art LSTM approaches, we verify the suitability of the proposed causal MS-TCN for surgical phase recognition.
description: 10 pages, 2 figures
title: ADCO, Comptes du Petit-Cîteaux (1477-1491) (11 H 1179), f. 00450
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Archives Départementales De La Côte D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CBMA/CG21/F.PETOT/2019
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: cartulaire
subject: comptes
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge

description: Comptes du Petit-Cîteaux (1477-1491), Archives départementales de la Côte-d'Or, (11 H 1179). Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Comptes du Petit-Cîteaux (1477-1491), Archives départementales de la Côte-d'Or, (11 H 1179), f. 00450, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https://manuscrits.cbma-project.eu/
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
Systemically delivered antibody-labeled magnetic iron oxide nanoparticles are less toxic than plain nanoparticles when activated by alternating magnetic fields
Creators: name: Yang, Chun-Ting
name: Korangath, Preethi
name: Stewart, Jackie
name: Hu, Chen
name: Fu, Wei
name: Grüttner, Cordula
name: Beck, Sarah E.
name: Lin, Feng-Huei
name: Ivkov, Robert
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Pharmacology
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Hematology

description: Toxicity from off-target heating with magnetic hyperthermia (MHT) is generally assumed to be understood. MHT research focuses on development of more potent heating magnetic iron oxide nanoparticles (MIONs), yet our understanding of factors that define biodistribution following systemic delivery remains limited. Preclinical development relies on mouse models, thus understanding off-target heating with MHT in mice provides critical knowledge for clinical development. Eight-week old female nude mice received a single tail vein injection of bionized nanoferrite (BNF) MIONs or a counterpart labeled with a polyclonal human antibody (BNF-IgG) at 1 mg, 3 mg or 5 mg Fe/mouse on day 1. On day 3, mice were exposed to an alternating magnetic field (AMF) having amplitude of 32, 48 or 64 kA/m at ∼145 kHz for 20 min. Twenty-four hours later, blood, livers and spleens were harvested and analyzed. Damage to livers was apparent by histology and serum liver enzymes following MHT with BNF or BNF-IgG at doses ≥3 mg Fe and AMF amplitudes ≥48 kA/m. Differences between effects with BNF vs. BNF-IgG at a dose of 3 mg Fe were noted in all measures, with less damage and increased survival occurring in mice injected with BNF-IgG. Necropsies revealed severe damage to duodenum and upper small intestines, likely the immediate cause of death at the highest MHT doses. Results demonstrate that the MION coating affects biodistribution, which in turn determines off-target effects. Developments to improve heating capabilities of MIONs may be clinically irrelevant without better control of biodistribution.
And you thought that was a dog! How auditory information alters visual perception
Creators: name: Williams, Jamal
Publisher: name: Open Science Framework
Year: 2022
Subjects: subject: Cognition and Perception
subject: Social and Behavioral Sciences
subject: Psychology
subject: FOS: Psychology

description: Enclosed in this registration are the experimental scripts, stimuli, and data files needed to (1) replicate the original project and to (2) replicate the original analyses.
Nanosized Monoatomic Palladium Metallic Glass
Creators: name: He, Dong Sheng
name: Huang, Yi
name: Myers, Benjamin D.
name: Isheim, Dieter
name: Fan, Xinyu
name: Deng, Yunsheng
name: Xie, Lin
name: Han, Shaobo
name: Qiu, Yang
name: Huang, Li
name: Dravid, Vinayak P.
name: He, Jiaqing
Publisher: name: arXiv
Year: 2020
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Physically vitrifying single-element metallic glass requires ultrahigh cooling rates, which are still unachievable for most of the closest-packed metals. Here, we report a facile synthetic strategy for creating mono-atomic palladium metallic glass nanoparticles with a purity of 99.35 +/- 0.23 at% from palladium-silicon liquid droplets using a cooling rate below 1000 K/s. In-situ environmental transmission electron microscopy directly detected the leaching of silicon. Further hydrogen absorption experiment showed that this palladium metallic glass expanded little upon hydrogen uptake, exhibiting a great potential application for hydrogen separation. Our results provide insight into the formation of mono-atomic metallic glass at nanoscale.
description: Nano Res. (2022)
Additional file 1: Table S1. of Association of low blood pressure with suicidal ideation: a cross-sectional study of 10,708 adults with normal or low blood pressure in Korea
Creators: name: Kyung-In Joung
name: Cho, Sung-Il
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Marine Biology

description: Association of high blood pressure with suicidal ideation, crude and five multiple covariate models. Both prehypertensive and hypertensive group were also examined to see whether those blood pressure have associations with suicidal ideation by using multivariate logistic regression. In contrast to low BP group, no significant associations were shown in all covariates models. (DOCX 18Â kb)
Uncertainties in supernova input rates drive qualitative differences in simulations of galaxy evolution
Creators: name: Keller, Benjamin W.
name: Kruijssen, J. M. Diederik
Publisher: name: arXiv
Year: 2020
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: Feedback from core collapse supernovae (SNe), the final stage of evolution of massive stars, is a key element in galaxy formation theory. The energy budget of SN feedback, as well as the duration over which SNe occur, are constrained by stellar lifetime models and the minimum mass star that ends its life as a SN. Simplifying approximations for this SN rate are ubiquitous in simulation studies. We show here how the choice of SN budget and timings ($t_0$ for the delay between star formation and the first SN, $τ_{\rm SN}$ for the duration of SN injection, and the minimum SN progenitor mass) drive changes in the regulation of star formation and outflow launching. Extremely long delays for instantaneous injection of SN energy $(t_0 << 20\;\rm{Myr})$ reduces star formation and drive stronger outflows compared smaller delays. This effect is primarily driven by enhanced clustering of young stars. With continuous injection of energy, longer SN durations results in a larger fraction of SN energy deposited in low ambient gas densities, where cooling losses are lower. This is effect is particularly when driven by the choice of the minimum SN progenitor mass, which also sets the total SN energy budget. These underlying uncertainties mean that despite advances in the sub-grid modeling of SN feedback, serious difficulties in constraining the strength of SN feedback remain. We recommend future simulations use realistic SN injection durations, and bound their results using SN energy budgets and durations for minimum SN progenitors of $7M_\odot$ and $9M_\odot$.
description: Replaced with final MNRAS published version
A multivariate integral representation on $\mathrm{GL}_2 \times \mathrm{GSp}_4$ inspired by the pullback formula
Creators: name: Pollack, Aaron
name: Shah, Shrenik
Publisher: name: arXiv
Year: 2017
Subjects: subject: Number Theory (math.NT)
subject: Representation Theory (math.RT)
subject: FOS: Mathematics

description: We give a two variable Rankin-Selberg integral inspired by consideration of Garrett's pullback formula. For a globally generic cusp form on $\mathrm{GL}_2\times \mathrm{GSp}_4$, the integral represents the product of the $\mathrm{Std}\times \mathrm{Spin}$ and $\mathbf{1} \times \mathrm{Std}$ $L$-functions. We prove a result concerning an Archimedean principal series representation in order to verify a case of Jiang's first-term identity relating certain non-Siegel Eisenstein series on symplectic groups. Using it, we obtain a new proof of a known result concerning possible poles of these $L$-functions.
description: Final version. To appear in Trans. Amer. Math. Soc
Spontaneous emergence of rogue waves in partially coherent waves: a quantitative experimental comparison between hydrodynamics and optics
Creators: name: Koussaifi, Rebecca El
name: Tikan, Alexey
name: Toffoli, Alessandro
name: Randoux, Stephane
name: Suret, Pierre
name: Onorato, Miguel
Publisher: name: arXiv
Year: 2017
Subjects: subject: Pattern Formation and Solitons (nlin.PS)
subject: Fluid Dynamics (physics.flu-dyn)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Rogue waves are extreme and rare fluctuations of the wave field that have been discussed in many physical systems. Their presence substantially influences the statistical properties of an incoherent wave field. Their understanding is fundamental for the design of ships and offshore platforms. Except for very particular meteorological conditions, waves in the ocean are characterised by the so-called JONSWAP (Joint North Sea Wave Project) spectrum. Here we compare two unique experimental results: the first one has been performed in a 270-meter wave tank and the other in optical fibers. In both cases, waves characterised by a JONSWAP spectrum and random Fourier phases have been launched at the input of the experimental device. The quantitative comparison, based on an appropriate scaling of the two experiments, shows a very good agreement between the statistics in hydrodynamics and optics. Spontaneous emergence of heavy tails in the probability density function of the wave amplitude is observed in both systems. The results demonstrate the universal features of rogue waves and provide a fundamental and explicit bridge between two important fields of research. Numerical simulations are also compared with experimental results.
Appendice : Effet de la menace sur la cécité inattentionnelle - The gorilla (Appendix : Threat effect on inattentional blindness - The Gorilla)
Creators: name: Ourouk, Scylla Gautier Lucas
name: Croizet, Jean-Claude
name: Normand, Alice
Publisher: name: Open Science Framework
Year: 2022
Subjects: subject: Social and Behavioral Sciences

description: Le but de cette recherche est d'étudier l'effet de focalisation induit par une menace (une menace physique ici : la peur d'un son intense), et notamment les conséquence de ce resserrement attentionnel sur une tâche d'inattentional blindness (The Gorilla).
Additional file 3: of Genome-wide identification of cyclophilin genes in Gossypium hirsutum and functional characterization of a CYP with antifungal activity against Verticillium dahliae
Creators: name: Yang, Jun
name: Wang, Guoning
name: Ke, Huifeng
name: Zhang, Yan
name: Ji, Lianlian
name: Huang, Lizhi
name: Zhang, Chunying
name: Wang, Xingfen
name: Ma, Zhiying
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Plant Biology

description: Table S3. Putative CYPs identified in V. dahliae strain VdLs.17 (DOCX 13 kb)
Minimum size of 21-cm simulations
Creators: name: Kaur, Harman Deep
name: Gillet, Nicolas
name: Mesinger, Andrei
Publisher: name: arXiv
Year: 2020
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: Cosmic 21cm interferometry is set to revolutionize our understanding of the Epoch of Reionization (EoR) and the Cosmic Dawn (CD). However, the signal has structure on a huge range of scales, requiring large simulation boxes to statistically capture the relevant fields. In this work we quantify the minimum box size for simulating the power spectrum (PS) of the cosmic 21cm signal. We perform multiple realizations of the initial conditions, for a range of box sizes. We quantify convergence with respect to a mock observation of box length 1.1 Gpc, with thermal noise computed for a 1000h observation with SKA1-low. We find that simulations of box lengths 200-300 Mpc underestimate the large-scale power during the CD by ~7-9 % on average. We conclude that box lengths of $L\gtrsim250$ Mpc are needed to converge at the level of
description: 9 pages, 6 figures, published in MNRAS
Analytical formulation for the modulation of the time-resolved dynamical Franz-Keldysh effect by the electron excitation in dielectrics
Creators: name: Otobe, T.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Analytical formulation of sub-cycle modulation (SCM) of dielectrics including electron excitation is presented. The SCM is sensitive to not only the time-resolved dynamical Franz-Keldysh effect (Tr-DFKE) [T. Otobe, et al., Phys. Rev. B 93, 045124 (2016)], which is the nonlinear response without the electron excitation, but also the excited electrons. The excited electrons enhance the modulation with even-harmonics of pump laser frequency, and generate the odd-harmonics components. The new aspect of SCM is a consequence of i) the interference between the electrons excited by the pump laser and those excited by the probe pulse laser and ii) oscillation of the generated wave packed by the pump laser. When the probe- and pump-pulse polarizations are parallel, the enhancement of the even harmonics and the generation of the odd harmonics modulation appear. However, if the polarizations are orthogonal, the effect arising from the electron excitations becomes weak. By comparing the parabolic and cosine band models, I found that the electrons under the intense laser field move as quasi-free particles.
Additional file 5: of “Candidatus Paraporphyromonas polyenzymogenes” encodes multi-modular cellulases linked to the type IX secretion system
Creators: name: A. Naas
name: L. Solden
name: A. Norbeck
name: H. Brewer
name: L. Hagen
name: I. Heggenes
name: A. McHardy
name: R. Mackie
name: L. Paša-Tolić
name: M. Arntzen
name: V. Eijsink
name: N. Koropatkin
name: M. Hess
name: K. Wrighton
name: P. Pope
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Physiology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Figure S3. Exemplar GH5-containing gene clusters in Ca. MH11 genomes. (DOCX 145 kb)
Revisiting the Context Window for Cross-lingual Word Embeddings
Creators: name: Ri, Ryokan
name: Tsuruoka, Yoshimasa
Publisher: name: arXiv
Year: 2020
Subjects: subject: Computation and Language (cs.CL)
subject: FOS: Computer and information sciences

description: Existing approaches to mapping-based cross-lingual word embeddings are based on the assumption that the source and target embedding spaces are structurally similar. The structures of embedding spaces largely depend on the co-occurrence statistics of each word, which the choice of context window determines. Despite this obvious connection between the context window and mapping-based cross-lingual embeddings, their relationship has been underexplored in prior work. In this work, we provide a thorough evaluation, in various languages, domains, and tasks, of bilingual embeddings trained with different context windows. The highlight of our findings is that increasing the size of both the source and target window sizes improves the performance of bilingual lexicon induction, especially the performance on frequent nouns.
description: ACL2020
Localization transition induced by learning in random searches
Creators: name: Falcón-Cortés, Andrea
name: Boyer, Denis
name: Giuggioli, Luca
name: Majumdar, Satya N.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Neurons and Cognition (q-bio.NC)
subject: FOS: Physical sciences
subject: FOS: Biological sciences

description: We solve an adaptive search model where a random walker or Lévy flight stochastically resets to previously visited sites on a $d$-dimensional lattice containing one trapping site. Due to reinforcement, a phase transition occurs when the resetting rate crosses a threshold above which non-diffusive stationary states emerge, localized around the inhomogeneity. The threshold depends on the trapping strength and on the walker's return probability in the memoryless case. The transition belongs to the same class as the self-consistent theory of Anderson localization. These results show that similarly to many living organisms and unlike the well-studied Markovian walks, non-Markov movement processes can allow agents to learn about their environment and promise to bring adaptive solutions in search tasks.
description: 5 pages, 5 figures + 4 pages of Supplemental Information. Accepted in Physical Review Letters
Deformations of overconvergent isocrystals on the projective line
Creators: name: Agrawal, Shishir
Publisher: name: arXiv
Year: 2017
Subjects: subject: Algebraic Geometry (math.AG)
subject: FOS: Mathematics

description: Let $k$ be a perfect field of positive characteristic and $Z$ an effective Cartier divisor in the projective line over $k$ with complement $U$. In this note, we establish some results about the formal deformation theory of overconvergent isocrystals on $U$ with fixed "local monodromy" along $Z$. En route, we show that a Hochschild cochain complex governs deformations of a module over an arbitrary associative algebra. We also relate this Hochschild cochain complex to a de Rham complex in order to understand the deformation theory of a differential module over a differential ring.
description: 59 pages; fixed typos, improved exposition; comments welcome!
Convexity properties of presymplectic moment maps
Creators: name: Lin, Yi
name: Sjamaar, Reyer
Publisher: name: arXiv
Year: 2017
Subjects: subject: Symplectic Geometry (math.SG)
subject: FOS: Mathematics

description: The convexity and Morse-theoretic properties of moment maps in symplectic geometry typically fail for presymplectic manifolds. We find a condition on presymplectic moment maps that prevents these failures. Our result applies for instance to Prato's quasifolds and to Hamiltonian actions on contact manifolds and cosymplectic manifolds.
description: reference added
On partitions with $k$ corners not containing the staircase with one more corner
Creators: name: Briand, Emmanuel
Publisher: name: arXiv
Year: 2020
Subjects: subject: Combinatorics (math.CO)
subject: FOS: Mathematics
subject: 05A17

description: We give three proofs of the following result conjectured by Carriegos, De Castro-Garc\'ıa and Muñoz Castañeda in their work on enumeration of control systems: when $\binom{k+1}{2} \le n < \binom{k+2}{2}$, there are as many partitions of $n$ with $k$ corners as pairs of partitions $(α, β)$ such that $\binom{k+1}{2} + |α| + |β| = n$.
description: 11 pages, 4 figures. Minor changes
Optical EVPA rotations in blazars: testing a stochastic variability model with RoboPol data
Creators: name: Kiehlmann, S.
name: Blinov, D.
name: Pearson, T. J.
name: Liodakis, I.
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: We identify rotations of the polarization angle in a sample of blazars observed for three seasons with the RoboPol instrument. A simplistic stochastic variability model is tested against this sample of rotation events. The model is capable of producing samples of rotations with parameters similar to the observed ones, but fails to reproduce the polarization fraction at the same time. Even though we can neither accept nor conclusively reject the model, we point out various aspects of the observations that are fully consistent with a random walk process.
description: 17 pages, 18 figures, 4 tables. Accepted 2017 August 17 for publication in MNRAS
Large deviations for continuous time random walks
Creators: name: Wang, Wanli
name: Barkai, Eli
name: Burov, Stanislav
Publisher: name: arXiv
Year: 2020
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: Recently observation of random walks in complex environments like the cell and other glassy systems revealed that the spreading of particles, at its tails, follows a spatial exponential decay instead of the canonical Gaussian. We use the widely applicable continuous time random walk model and obtain the large deviation description of the propagator. Under mild conditions that the microscopic jump lengths distribution is decaying exponentially or faster i.e. Lévy like power law distributed jump lengths are excluded, and that the distribution of the waiting times is analytical for short waiting times, the spreading of particles follows an exponential decay at large distances, with a logarithmic correction. Here we show how anti-bunching of jump events reduces the effect, while bunching and intermittency enhances it. We employ exact solutions of the continuous time random walk model to test the large deviation theory.
description: 19 pages and 14 figures
Relativistic quantum bouncing particles in a homogeneous gravitational field
Creators: name: Rohim, Ar
name: Ueda, Kazushige
name: Yamamoto, Kazuhiro
name: Lin, Shih-Yuin
Publisher: name: arXiv
Year: 2020
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: In this paper, we study the relativistic effect on the wave functions for a bouncing particle in a gravitational field. Motivated by the equivalence principle, we investigate the Klein-Gordon and Dirac equations in Rindler coordinates with the boundary conditions mimicking a uniformly accelerated mirror in Minkowski space. In the nonrelativistic limit, all these models in the comoving frame reduce to the familiar eigenvalue problem for the Schrödinger equation with a fixed floor in a linear gravitational potential, as expected. We find that the transition frequency between two energy levels of a bouncing Dirac particle is greater than the counterpart of a Klein-Gordon particle, while both are greater than their nonrelativistic limit. The different corrections to eigen-energies of particles of different nature are associated with the different behaviors of their wave functions around the mirror boundary.
description: 18 pages, 3 figures, 2 tables, published version
title: White paper on microbial anti-cancer therapy and prevention
Creators: name: Forbes, Neil S.
name: Coffin, Robert S.
name: Deng, Liang
name: Evgin, Laura
name: Fiering, Steve
name: Giacalone, Matthew
name: Gravekamp, Claudia
name: Gulley, James L.
name: Gunn, Hal
name: Hoffman, Robert M.
name: Kaur, Balveen
name: McFadden, Grant
name: Al., Et.
Publisher: name: University of Massachusetts Amherst
Year: 2018

description: In this White Paper, we discuss the current state of microbial cancer therapy. This paper resulted from a meeting (‘Microbial Based Cancer Therapy’) at the US National Cancer Institute in the summer of 2017. Here, we define ‘Microbial Therapy’ to include both oncolytic viral therapy and bacterial anticancer therapy. Both of these fields exploit tumor-specific infectious microbes to treat cancer, have similar mechanisms of action, and are facing similar challenges to commercialization. We designed this paper to nucleate this growing field of microbial therapeutics and increase interactions between researchers in it and related fields. The authors of this paper include many primary researchers in this field. In this paper, we discuss the potential, status and opportunities for microbial therapy as well as strategies attempted to date and important questions that need to be addressed. The main areas that we think will have the greatest impact are immune stimulation, control of efficacy, control of delivery, and safety. There is much excitement about the potential of this field to treat currently intractable cancer. Much of the potential exists because these therapies utilize unique mechanisms of action, difficult to achieve with other biological or small molecule drugs. By better understanding and controlling these mechanisms, we will create new therapies that will become integral components of cancer care.
A Market Mechanism for Virtual Inertia
Creators: name: Poolla, Bala Kameshwar
name: Bolognani, Saverio
name: Na, Li
name: Dörfler, Florian
Publisher: name: arXiv
Year: 2017
Subjects: subject: Optimization and Control (math.OC)
subject: FOS: Mathematics

description: One of the recognized principal issues brought along by the steadfast migration towards power electronic interfaced energy sources is the loss of rotational inertia. In conventional power systems, the inertia of the synchronous machines plays a crucial role in safeguarding against any drastic variations in frequency by acting as a buffer in the event of large and sudden power generation-demand imbalances. In future power electronic-based power systems, the same role can be played by strategically located virtual inertia devices. However, the question looms large as to how the system operators would procure and pay for these devices. In this article, we propose a market mechanism inspired by the ancillary service markets in power supply. We consider a linear network reduced power system model along with a robust $\mathcal{H}_2$ performance metric penalizing the worst-case primary control effort. With a social welfare maximization problem for the system operator as a benchmark, we construct a market mechanism in which bids are invited from agents providing virtual inertia, who in turn are compensated via a Vickrey-Clarke-Groves payment rule. The resulting mechanism ensures truthful bidding to be the dominant bidding strategy and guarantees non-negative payoffs for the agents. A three-region case study is considered in simulations, and a comparison with a regulatory approach to the same problem is presented.
title: ADCO, Boursier de Cîteaux : comptes (1489-1493) (11 H 1166), f. 00234
Creators: name: de la Côte-d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CBMA/CG21/F.PETOT/2019
name: Petot, Frédéric
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: comptes
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge

description: Boursier de Cîteaux : comptes (1489-1493), Archives départementales de la Côte-d'Or, (11 H 1166). Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Boursier de Cîteaux : comptes (1489-1493), Archives départementales de la Côte-d'Or, (11 H 1166), f. 00234, in Projet CBMA - Corpus Burgundiae Medii Aevi \[Ressource en ligne\], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
Extremal problems and results related to Gallai-colorings
Creators: name: Li, Xihe
name: Broersma, Hajo
name: Wang, Ligong
Publisher: name: arXiv
Year: 2020
Subjects: subject: Combinatorics (math.CO)
subject: FOS: Mathematics
subject: 05C15, 05C35, 05C55, 05D10

description: A Gallai-coloring (Gallai-$k$-coloring) is an edge-coloring (with colors from $\{1, 2, \ldots, k\}$) of a complete graph without rainbow triangles. Given a graph $H$ and a positive integer $k$, the $k$-colored Gallai-Ramsey number $GR_k(H)$ is the minimum integer $n$ such that every Gallai-$k$-coloring of the complete graph $K_n$ contains a monochromatic copy of $H$. In this paper, we consider two extremal problems related to Gallai-$k$-colorings. First, we determine upper and lower bounds for the maximum number of edges that are not contained in any rainbow triangle or monochromatic triangle in a $k$-edge-coloring of $K_n$. Second, for $n\geq GR_k(K_3)$, we determine upper and lower bounds for the minimum number of monochromatic triangles in a Gallai-$k$-coloring of $K_{n}$, yielding the exact value for $k=3$. Furthermore, we determine the Gallai-Ramsey number $GR_k(K_4+e)$ for the graph on five vertices consisting of a $K_4$ with a pendant edge.
description: 20 pages, 1 figure
Additional file 3 of Splicing factor SRSF1 promotes breast cancer progression via oncogenic splice switching of PTPMT1
Creators: name: Du, Jun-Xian
name: Luo, Yi-Hong
name: Zhang, Si-Jia
name: Wang, Biao
name: Chen, Cong
name: Zhu, Gui-Qi
name: Zhu, Ping
name: Cai, Cheng-Zhe
name: Wan, Jing-Lei
name: Cai, Jia-Liang
name: Chen, Shi-Ping
name: Dai, Zhi
name: Zhu, Wei
Publisher: name: figshare
Year: 2021
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Computational Biology

description: Additional file 3: Supplementary Figure 3. PTPMT1 splicing switch are required for cell growth and migration in vitro. (A) qRT-PCR for testing the inhibitory effects of siPTPMT1-1/2 specific targeting to PTPMT1-L in T47D cell lines. (B) Cell proliferation assay is performed using cells described in (A). (C) Clonogenic survival assay for control (pLKO.1) and treated (shPTPMT1-L) cells are conducted and then quantified in the bar graph. (D) The cell cycle of control (pLKO.1) and treated (shPTPMT1-L) cells are analyzed by flow cytometry and the relative cell population of each cell cycle phase is quantified in the bar graph. (E) qRT-PCR for testing overexpressing efficiency of PTPMT1-L/S plasmids in T47D cell line. (F, G) Cell proliferation assay and clonogenic survival assay for control (pCMV) and overexpression (PTPMT1-L/S) cells. (H) Measurement of cell migration by wound-healing assays using MCF7/MDA-MB-231 cells transfected with PTPMT1-L/S or control plasmids.