cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
MOESM3 of Developing item banks to measure three important domains of health-related quality of life (HRQOL) in Singapore
Creators: name: Uy, Elenore
name: Xiao, Lynn
name: Xiaohui Xin
name: Yeo, Joanna
name: Pua, Yong Hao
name: Geok Lee
name: Kwan, Yu
name: Teo, Edmund
name: Janhavi Vaingankar
name: Mythily Subramaniam
name: Chan, Mei
name: Kumar, Nisha
name: Alcey Ang
name: Bautista, Dianne
name: Cheung, Yin
name: Thumboo, Julian
Publisher: name: figshare
Year: 2020
Subjects: subject: Space Science
subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Science Policy

description: Additional file 3. Patient Reported Outcomes Measurement Instrument System (PROMIS) Domain Instruments included in the item library.
"Extreme-Value" Methods Simplified
Creators: name: Botts, Ralph R.
name: Botts, Ralph R.
Publisher: name: Unknown
Year: 1957
Subjects: Research and Development/Tech Change/Emerging Technologies
Research Methods/ Statistical Methods

description: New methods have been devised for fitting skewed statistical distributions that conform to a double exponential model. Such distributions characterize a large class of phenomena of interest to agricultural economists. Distributions of data involving rainfall, temperature, crop yields, crop-hail losses, and others follow this pattern,. The new technique, under the name of the theory of extreme values, makes use of graphics and is much less complex and time-consuming than older methods. But most of the available literature is highly mathematical and not easily understood. This paper presents a nonmathematical explanation for the working agricultural economist.
Etude du couplage optomecanique dans une cavite de grande finesse. Observation du mouvement Brownien d'un miroir
Creators: name: Hadjar, Yassine
Publisher: name: arXiv
Year: 2004
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The topic of this thesis is the theoretical analysis of the optomechanical coupling effects in a high-finesse optical cavity, and the experimental realization of such a device. Radiation pressure exerted by light limits the sensitivity of high precision optical measurements. In particular, the sensitivity of interferometric measurements of gravitational wave is limited by the so called standard quantum limit. cavity with a movable mirror. The internal field stored in such cavity can be orders of magnitude greater than the input field, and it's radiation pressure force can change the physical length of the cavity. In turn, any change in the mirror's position changes the phase of the out put field. This optomechanical coupling leads to an intensity-dependent phase shift for the light equivalent to an optical Kerr effect. Such a device can then be used for squeezing generation or quantum nondemolition measurements. In our experiment, we send a laser beam in to a high-finesse optical cavity with a movable mirror coated on a high Q-factor mechanical resonator. Quantum effects of radiation pressure become therefore, at low temperature, experimentally observable. However, we've shown that the phase of the reflected field is very sensitive to small mirror displacements, which indicate other possible applications of this type of device like high precision displacements measurements. We've been able to observe the Brownian motion of the moving mirror. We've also used an auxiliary intensity modulated laser beam to optically excite the acoustic modes. We've finally obtained a sensitivity of 2x10^(-19) m/sqrt(Hz), in agreement with theoretical prediction.
Ground-state phase diagram of the three-band Hubbard model from density matrix embedding theory
Creators: name: Cui, Zhi-Hao
name: Sun, Chong
name: Ray, Ushnish
name: Zheng, Bo-Xiao
name: Sun, Qiming
name: Chan, Garnet Kin-Lic
Publisher: name: arXiv
Year: 2020
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Superconductivity (cond-mat.supr-con)
subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: We determine the ground-state phase diagram of the three-band Hubbard model across a range of model parameters using density matrix embedding theory. We study the atomic-scale nature of the antiferromagnetic (AFM) and superconducting (SC) orders, explicitly including the oxygen degrees of freedom. All parametrizations of the model display AFM and SC phases, but the decay of AFM order with doping is too slow compared to the experimental phase diagram, and further, coexistence of AFM and SC orders occurs in all parameter sets. The local magnetic moment localizes entirely at the copper sites. The magnetic phase diagram is particularly sensitive to $Δ_{pd}$ and $t_{pp}$, and existing estimates of the charge transfer gap $Δ_{pd}$ appear too large in so-called minimal model parametrizations. The electron-doped side of the phase diagram is qualitatively distinct from hole-doped side and we find an unusual two-peak structure in the SC in the full model parametrization. Examining the SC order at the atomic scale, within the larger scale $d_{x^2 - y^2}$-wave SC pairing order between Cu-Cu and O-O, we also observe a local $p_{x (y)}$ [or $d_{xz (yz)}$]-symmetry modulation of the pair density on the Cu-O bonds. Our work highlights some of the features that arise in a three-band versus one-band picture, the role of the oxygen degrees of freedom in new kinds of atomic-scale SC orders, and the necessity of re-evaluating current parametrizations of the three-band Hubbard model.
description: 14 pages, 11 figures
Additional file 4 of Metabolomics analyses of traditional Chinese medicine formula Shuang Huang Lian by UHPLC-QTOF-MS/MS
Creators: name: Xu, Gang
name: Shu, Yachun
name: Xu, Yan
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology

description: Additional file 4: Table S1. The chemical components identified with both names and formulas in SHL granule preparation form.
MOESM2 of Developing item banks to measure three important domains of health-related quality of life (HRQOL) in Singapore
Creators: name: Uy, Elenore
name: Xiao, Lynn
name: Xiaohui Xin
name: Yeo, Joanna
name: Pua, Yong Hao
name: Geok Lee
name: Kwan, Yu
name: Teo, Edmund
name: Janhavi Vaingankar
name: Mythily Subramaniam
name: Chan, Mei
name: Kumar, Nisha
name: Alcey Ang
name: Bautista, Dianne
name: Cheung, Yin
name: Thumboo, Julian
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Science Policy

description: Additional file 2. PubMed electronic search strategy for quality of life instruments validated in a Singapore, adult population.
Possible singlet to triplet pairing transition in NaxCoO2 H2O
Creators: name: Maska, M. M.
name: Mierzejewski, M.
name: Andrzejewski, B.
name: Foo, M. L.
name: Cava, R. J.
name: Klimczuk, T.
Publisher: name: arXiv
Year: 2004
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We present precise measurements of the upper critical field (Hc2) in the recently discovered cobalt oxide superconductor. We have found that the critical field has an unusual temperature dependence; namely, there is an abrupt change of the slope of Hc2(T) in a weak field regime. In order to explain this result we have derived and solved Gor'kov equations on a triangular lattice. Our experimental results may be interpreted in terms of the field-induced transition from singlet to triplet superconductivity.
description: 6 pages, 5 figures, revtex
Trapezoidal methods for fractional differential equations: theoretical and computational aspects
Creators: name: Garrappa, Roberto
Publisher: name: arXiv
Year: 2019
Subjects: subject: Numerical Analysis (math.NA)
subject: FOS: Mathematics
subject: 34A08, 65L05, 65L20

description: The paper describes different approaches to generalize the trapezoidal method to fractional differential equations. We analyze the main theoretical properties and we discuss computational aspects to implement efficient algorithms. Numerical experiments are provided to illustrate potential and limitations of the different methods under investigation.
MOESM1 of An in vitro toolbox to accelerate anti-malarial drug discovery and development
Creators: name: Charman, Susan
name: Andreu, Alice
name: Barker, Helena
name: Blundell, Scott
name: Campbell, Anna
name: Campbell, Michael
name: Chen, Gong
name: Chiu, Francis
name: Crighton, Elly
name: Kasiram Katneni
name: Morizzi, Julia
name: Patil, Rahul
name: Pham, Thao
name: Ryan, Eileen
name: Saunders, Jessica
name: Shackleford, David
name: White, Karen
name: Almond, Lisa
name: Dickins, Maurice
name: Smith, Dennis
name: Joerg Moehrle
name: Burrows, Jeremy
name: Abla, Nada
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Computational Biology

description: Additional file 1. Additional tables.
Land Clearing and Drainage Data From Airphoto
Creators: name: Dill, Henry W.
name: Dill, Henry W.
Publisher: name: Unknown
Year: 1957
Subjects: Land Economics/Use
Research Methods/ Statistical Methods

description: The obtaining of quantitative data for economic analysis of changes in the agricultural use of land has been a problem in recent years. Field study is a slow and expensive method of providing information. Usually, it requires several experienced persons to collect the data needed. The airphoto interpretation method described in this article supplies suitable data for economic studies with considerable savings in time and cost. With this method, a minimum of personnel is needed.
Blackburneus diminutus
Creators: name: Dellacasa, Marco
name: Dellacasa, Giovanni
name: Gordon, Robert D.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Aphodiidae
Blackburneus
Blackburneus diminutus

description: Blackburneus diminutus (Bates, 1887)
(Fig. 84-88)
 Aphodius diminutus Bates, 1887: 89; Blackwelder 1944: 212.
 Aphodius (Blackburneus) diminutus; Schmidt 1913: 137; Dellacasa 1988: 121.
 Blackburneus diminutus; Dellacasa et al. 2002: 203; Skelley et al. 2007: 2.
 Typelocality. Dueñas, Guatemala.
 Type repository. Natural History Museum, London (type examined).
 Redescription. Length 2.5-3.5 mm; oblong, moderatelyconvex, rather shiny, glabrous. Brownish; head anteriorly, and pronotum sides reddish; elytra shadowy reddish toward base; legs testaceous; antennal club dark brown. Head with epistome feebly convex, superficially microreticulate, coarsely, densely and regularly punctured; clypeus faintly sinuate at middle, round at sides, thinly bordered, edge near imperceptibly bristled; genae round, very shortly bristled, not protruding from the eyes; frontal suture distinct; front coarsely, rather densely and regularly punctured. Pronotum transverse, convex, distinctly, densely and somewhat irregularly punctured; punctationcoarser and denser laterally and basally, lacking along a longitudinalareola on disc; sides thinly bordered, edge glabrous; hind angles obtusely round, with extremelyshort bristles, base almost regularly arcuate. Scutellum very elongate, with curved sides, sparsely punctured and grooved laterally. Elytra oval-elongate, regularly convex, finely but deeply striate; striae feebly crenulate; interstriae moderately convex, superficially microreticulate apically, distinctly, almost coarsely and rather sparsely punctured. Hind tibiae superior apical spur stout, nearly as long as inferior one, distinctly shorter than first tarsal segment; latter longer than following two segments combined. Male: pronotum somewhatmore transverse; metasternalplate distinctlygrooved; aedeagus Fig. 87-88. Female: pronotum somewhat narrower frontward; metasternal plate nearly flat.
 Material examined. EL SALVADOR: Dept. San Miguel, Lake Olomega, 14.VIII.1925, leg. R. A. Stirton (1 ex. CNCI); Cerro Verde, 18.VI.1958, leg. O. L. Cartwright (3 exx., USNM); GUATEMALA: Alta Verapaz, Coban (1 ex., DCGI); Zapote, VI-VII.1932, leg. H. E. Hinton & R. L. Usinger (2 exx., DCGI).
 Distribution. El Salvador, Guatemala.
 Bionomics. Almost unknown. The specimens examined were collected in summer.
description: Published as part of Dellacasa, Marco, Dellacasa, Giovanni & Gordon, Robert D., 2011, Systematic revision of the American taxa belonging to the genera Alloblackburneus Bordat, 2009, and Blackburneus Schmidt, 1913, with description of seven new species (Coleoptera: Scarabaeidae: Aphodiinae), pp. 1-52 in Insecta Mundi 2011 (204) on page 22, DOI: 10.5281/zenodo.10090539
The Ginzburg-Landau Theory and the Surface Energy of a Colour Superconductor
Creators: name: Giannakis, Ioannis
name: Ren, Hai-cang
Publisher: name: arXiv
Year: 2003
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Condensed Matter (cond-mat)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We apply the Ginzburg-Landau theory to the colour superconducting phase of a lump of dense quark matter. We calculate the surface energy of a domain wall separating the normal phase from the super phase with the bulk equilibrium maintained by a critical external magnetic field. Because of the symmetry of the problem, we are able to simplify the Ginzburg-Landau equations and express them in terms of two components of the di-quark condensate and one component of the gauge potential. The equations also contain two dimensionless parameters: the Ginzburg-Landau parameter $κ$ and $ρ$. The main result of this paper is a set of inequalities obeyed by the critical value of the Ginzburg-Landau parameter--the value of $κ$ for which the surface energy changes sign--and its derivative with respect to $ρ$. In addition we prove a number of inequalities of the functional dependence of the surface energy on the parameters of the problem and obtain a numerical solution of the Ginzburg-Landau equations. Finally a criterion for the types of colour superconductivity (type I or type II) is established in the weak coupling approximation.
description: 18 pages, 2 figures, plain Tex
Opportunities for Research in Marketing
Creators: name: DeLoach, D.B.
name: DeLoach, D.B.
Publisher: name: Unknown
Year: 1957
Subjects: subject: Marketing
subject: FOS: Economics and business
subject: Research and Development/Tech Change/Emerging Technologies

description: Among the established purposes of Agricultural Economics Research is the publication of broad reviews of fields of research within the general area of agricultural economics. This is such an article. The author first presented the subject before the Western Agricultural Economics Research Council. Believing that his remarks deserved a wider audience, the Editors have persuaded him to prepare them for presentation here. They reflect his extensive experience and mature thinking on problems important for a forward-looking program of research in the economics of marketing.
Farm Population as a Useful Demographic Concept
Creators: name: Beale, Calvin L.
name: Beale, Calvin L.
Publisher: name: Unknown
Year: 1957
Subjects: Community/Rural/Urban Development
Land Economics/Use
Research and Development/Tech Change/Emerging Technologies

description: In the development of plans for the 1960 Census of Population, the question has been raised as to whether "farm population" should be retained as a distinctive category of enumeration, or if "open country" residents should be enumerated without distinction as to whether their residences are farms. This article presents certain demographic differences that, in the author's view, argue the continuing usefulness of retaining farm residence as a distinct category for enumeration.
Additional file 5 of Gait rehabilitation for foot and ankle impairments in early rheumatoid arthritis: a feasibility study of a new gait rehabilitation programme (GREAT Strides)
Creators: name: Hendry, Gordon J.
name: Bearne, Lindsay
name: Foster, Nadine E.
name: Godfrey, Emma
name: Hider, Samantha
name: Jolly, Lisa
name: Mason, Helen
name: McConnachie, Alex
name: McInnes, Iain B.
name: Patience, Aimie
name: Sackley, Catherine
name: Sekhon, Mandeep
name: Stanley, Bethany
name: van der Leeden, Marike
name: Williams, Anita E.
name: Woodburn, Jim
name: Steultjens, Martijn P. M.
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Science Policy
subject: Mental Health

description: Additional file 5. PROM scores by CWA. Table of mean change at 12-weeks summarised for the candidate primary outcome measures, split by response to the CWA 7-pt Likert scale. Estimated differences (and 95% CI) summarised for the mean change at 12-weeks per 1-unit increase in the CWA. E.g. The estimated difference between those who responded 'No change' versus 'A bit better' or 'A bit better' versus 'Much better'.
Identification of Root Nodule Isolates by 16S-rRNA PCR
Creators: name: Maluk, Marta
name: James, Euan
name: Iannetta, Pete
Publisher: name: Zenodo
Year: 2018
Subjects: Root Nodule
16S-rRNA PCR

description: Identification of Root Nodule Isolates by 16S-rRNA PCR
乳腺癌中胚系PALB2杂交性突变导致单倍剂量不足研究
Creators: name: Li, lifeng
Publisher: name: CNGB
Year: 2020
Subjects: Exome
Variation
Multiisolate
Medical

description: PALB2可能是单倍体功能不全的一个例子，因为单个杂合突变会导致恶性表型。但是，有人认为，PALB2功能拷贝中的继发性体细胞点突变会导致杂合性（LOH）和恶性肿瘤的丧失。我们从196名晚期乳腺癌（ABC）患者和另外480名患有各种家族性癌症的患者中筛选了种系PALB2突变的肿瘤和血液标本。我们分析了28个PALB2胚系突变患者的LOH和突变特征
A gPAV-Based Unconditionally Energy-Stable Scheme for Incompressible Flows with Outflow/Open Boundaries
Creators: name: Lin, L.
name: Liu, X.
name: Dong, S.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Computational Physics (physics.comp-ph)
subject: Computational Engineering, Finance, and Science (cs.CE)
subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: We present an unconditionally energy-stable scheme for approximating the incompressible Navier-Stokes equations on domains with outflow/open boundaries. The scheme combines the generalized Positive Auxiliary Variable (gPAV) approach and a rotational velocity-correction type strategy, and the adoption of the auxiliary variable simplifies the numerical treatment for the open boundary conditions. The discrete energy stability of the proposed scheme has been proven, irrespective of the time step sizes. Within each time step the scheme entails the computation of two velocity fields and two pressure fields, by solving an individual de-coupled Helmholtz (including Poisson) type equation with a constant pre-computable coefficient matrix for each of these field variables. The auxiliary variable, being a scalar number, is given by a well-defined explicit formula within a time step, which ensures the positivity of its computed values. Extensive numerical experiments with several flows involving outflow/open boundaries in regimes where the backflow instability becomes severe have been presented to test the performance of the proposed method and to demonstrate its stability at large time step sizes.
description: 34 pages, 18 figures, 6 tables
Blackburneus erythrinus
Creators: name: Dellacasa, Marco
name: Dellacasa, Giovanni
name: Gordon, Robert D.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Aphodiidae
Blackburneus
Blackburneus erythrinus

description: Blackburneuserythrinus (Bates, 1887)
(Fig. 89-93)
 Aphodius erythrinus Bates, 1887: 89; Blackwelder 1944: 212.
 Aphodius (Blackburneus) erythrinus; Schmidt 1913: 138; Dellacasa 1988: 125.
 Blackburneus erythrinus; Dellacasa et al. 2002: 205; Skelley et al. 2007: 2.
 Type locality. Volcan de Chiriqui, Panama.
 Type repository. Natural History Museum, London (type examined).
 Redescription. Length 3.0- 3.5 mm; shortly oval, strongly convex, rather dull, glabrous. Chestnutbrown; pronotum disc, scutellum and elytral suture darker; legs and antennal club chestnut-brown. Head with epistome nearly flat, densely microreticulate, finely andsparsely punctured; clypeus subsinuate at middle, obtusely round at sides, thinly bordered, edge glabrous and faintly upturned anteriorly; genae round, very shortly ciliate, not protruding from the eyes; frontal suture finely impressed; front strongly microreticulate, finely and sparsely punctured. Pronotum transverse, convex, microreticulate, rather coarsely and irregularly punctured; sides round, thinly bordered, edge glabrous; hind angles obtusely round; base feebly bisinuate. Scutellum elongate, microreticulate, with trace of lateral grooves, sparsely punctured. Elytra shortly oval, convex, distinctly striate; striae superficially punctured, not crenulate; interstriae moderately convex, strongly microreticulate, finely and sparsely but distinctly punctured. Hind tibiae superior apical spur as long as inferior one and shorter than firsttarsal segment; latter longer than following two segments combined. Male: pronotum somewhat more transverse; metasternal plate distinctly grooved; aedeagus Fig. 92-93. Female: pronotum somewhat feebly narrowed frontward; metasternal plate nearly flat.
 Material examined. COSTA RICA: Prov. Limón, Los Diamantes Exper. Station, 17.VII.1964, leg. R. E. Woodruff (in cow dung) (2 exx., CNCI; 4 exx. DCGI; 20 exx., FSCA); Puntarenas, Monteverde, 1200- 1700 m, 2-6.XII.1987, leg. Génier & Bertrand (sweeping) (1 ex., DCGI); PANAMA: Potrerillos, II.1934 (1 ex., USNM).
description: Published as part of Dellacasa, Marco, Dellacasa, Giovanni & Gordon, Robert D., 2011, Systematic revision of the American taxa belonging to the genera Alloblackburneus Bordat, 2009, and Blackburneus Schmidt, 1913, with description of seven new species (Coleoptera: Scarabaeidae: Aphodiinae), pp. 1-52 in Insecta Mundi 2011 (204) on pages 22-23, DOI: 10.5281/zenodo.10090539
Surface plasmon resonance study of the actin-myosin sarcomeric complex and tubulin dimers
Creators: name: Schuessler, Hans A.
name: Kolomenskii, Alexander A.
name: Mershin, Andreas
name: Nanopoulos, D. V.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Biosensors based on the principle of surface plasmon resonance (SPR) detection were used to measure biomolecular interactions in sarcomeres and changes of the dielectric constant of tubulin samples with varying concentration. At SPR, photons of laser light efficiently excite surface plasmons propagating along a metal (gold) film. This resonance manifests itself as a sharp minimum in the reflection of the incident laser light and occurs at a characteristic angle. The dependence of the SPR angle on the dielectric permittivity of the sample medium adjacent to the gold film allows the monitoring of molecular interactions at the surface. We present results of measurements of cross-bridge attachment/detachment within intact mouse heart muscle sarcomeres and measurements on bovine tubulin molecules pertinent to cytoskeletal signal transduction models.
description: Submitted to Journal of Modern Optics *Corresponding author: Andreas Mershin (mershin@physics.tamu.edu)
Writing as a Tool for Economic Research
Creators: name: Colvin, Esther M.
name: Mighell, Ronald L.
name: Colvin, Esther M.
name: Mighell, Ronald L.
Publisher: name: Unknown
Year: 1957
Subjects: Research and Development/Tech Change/Emerging Technologies
Research Methods/ Statistical Methods
Teaching/Communication/Extension/Profession

description: This article calls attention to the usefulness of an often neglected but basic tool of the economist's trade—the art of writing so as to carry ideas as exactly as possible from one mind to another, and sometimes from one part of one mind to another part of the same mind. Writing is a tool both in doing research and in presenting research results.
大数据-NIFTY营养代谢数据分析
Creators: name: 菲, 王
Publisher: name: CNGB
Year: 2020
Subjects: Other
全基因组关联研究的统计性结果(Summary statistics)
Multiisolate

description: 84种营养代谢元素的全基因组关联分析的统计性结果
多区域外显子组和T细胞受体测序揭示皮革胃患者基因组和免疫肿瘤内异质性
Creators: name: 赵, 国峰
Publisher: name: CNGB
Year: 2020
Subjects: Raw sequence reads
Genome sequencing
Exome
Monoisolate
Evolution

description: 皮革胃WES测序4个患者（40个样本）双端fastq原始文件
Additional file 1 of Age-specific transmission dynamics under suppression control measures during SARS-CoV-2 Omicron BA.2 epidemic
Creators: name: Zhu, Wenlong
name: Wen, Zexuan
name: Chen, Yue
name: Gong, Xiaohuan
name: Zheng, Bo
name: Liang, Xueyao
name: Xu, Ao
name: Yao, Ye
name: Wang, Weibing
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Neuroscience
subject: Biotechnology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 1: Table S1. Meanings and initial values of parameters in the age-structured SEIR model. Table S2. Outcomes, parameters and their values used in sensitivity analysis. Figure S1. Patterns of parameters (p_E, p_NAAT, and p_t) variation with date. A: Proportion of untraced exposed persons (p_E). B: Proportion of cases found by NAAT/RAT (p_NAAT). C: Proportion of concentrated isolation among positive NAAT cases (p_t). Figure S2. Values and regularity of p_E (A) and p_NAAT (B) used in sensitivity analysis. Figure S3. Cumulative number of cases in different districts of Shanghai. Figure S4. The potential areas of virus had been spread on different date of the epidemics in Shanghai (A) and Wuhan (B) with different mean transmission distance (namely the radius of each circle: 13.4 km in Shanghai and 4.4 km in Wuhan). The cumulative number of cases was same for each column. Figure S5. Estimated contract matrices at different settings over seven periods in Shanghai. Figure S6. Demographic comparison of population (A), cases (B) and standard incidence (C) for Shanghai and Wuhan. Figure S7. Effective reproductive number (Rt) in the epidemic of Shanghai. Rt was estimated from4-day and 7-day moving average respectively. Figure S8. Epidemic curve of cumulative predicted cases and reported cases estimate by the model with different values of parameters. Figure S9. The proportion of unascertained cases under different proportion of asymptomatic cases (A), proportion of untraced cases (B) and proportion of cases detected by NAAT/RAT (C). Figure S10. Comparation of estimated secondary attack rates (SAR) and estimated reported SAR (SARobs). Blue and red dashed line is overall SAR (24.1%) and overall SARobs (17.4%).
Westlake BioBank for Chinese (WBBC) cohort
Creators: name: 郑厚峰(Houfeng Zheng)
Publisher: name: CNGB
Year: 2020
Subjects: Raw sequence reads
Monoisolate
Medical

description: The Westlake BioBank for Chinese (WBBC) cohort is a population-based prospective study with its major purpose to better understand the effect of genetic and environmental factors on growth and development from adolescents to adults. The dataset comprises a wide range of demographics and anthropometric measures, serological tests, physical activity, sleep quality, age at menarche and bone mineral density.
Three nearby K-giants with planets: Accurate determination of basic parameters, including an analysis of metallicity based on Fe I lines
Creators: name: Lyubimkov, L. S.
name: Petrov, D. V.
name: Poklad, D. B.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: Fundamental parameters are determined for three bright, nearby K-giants, β Gem (K0 III), μ Leo (K2 III), and α Tau (K5 III). It is notable that around all three stars the giant planets have been found. Our results are compared with published high-precision data for benchmark stars included in the Gaia project. Very good agreement was obtained for all three giants with these data for the basic parameters Teff, logg, and M. Special attention was devoted to analysis of the Fe I lines which are the basis of a simultaneous determination of the metallicity index [Fe/H] and microturbulent parameter Vt. The equivalent widths W of the Fe I lines are automatically measured from published spectra for the benchmark stars. An analysis of Fe I lines from the list of "golden lines" selected in a study of benchmark stars led to the conclusion that the excitation potential El of the low level of the lines plays an substantial role in determining [Fe/H] and Vt. It is shown that in the case of the early K-giants β Gem and μ Leo for lines in the range of W from 100 to 300 mÅ there is a dependence of the [Fe/H] and Vt values on El. It is shown that a correct accounting for it leads an ambiguity in the determination of [Fe/H] and Vt for β Gem and μ Leo. In the case of the coolest K-giant α Tau (Aldebaran) with a temperature Teff = 3920K, this effect seems to be less pronounced. Recommendations are given for the Fe I lines selection for [Fe/H] and Vt determination. It is sonfirmed for the example of the three stars studied here that the non-LTE effects in the Fe I lines for the K-giants with normal metallicity are very minor, so they cannot be the reason of the revealed ambiguity in [Fe/H] and Vt values. The low ratios of the carbon 12C/13C and oxygen 16O/17O isotopes confirm that all three giants passed the phase of deep convective mixing.
description: 22 pages, 6 figures, 6 tables
Astrophysics: Extreme emission seen from $γ$-ray bursts
Creators: name: Zhang, Bing
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: Cosmic explosions called $γ$-ray bursts are the most energetic bursting events in the universe. Observations of extremely high-energy emission from two $γ$-ray bursts provide a new way to study these gigantic explosions.
description: appeared in Nature News & Views, author's version
The effect of the spin-orbit interaction on the band gap of half-metals
Creators: name: Mavropoulos, Ph.
name: Sato, K.
name: Zeller, R.
name: Dederichs, P. H.
name: Popescu, V.
name: Ebert, H.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The spin-orbit interaction can cause a nonvanishing density of states (DOS) within the minority-spin band gap of half-metals around the Fermi level. We examine the magnitude of the effect in Heusler alloys, zinc-blende half metals and diluted magnetic semiconductors, using first-principles calculations. We find that the ratio of spin-down to spin-up DOS at the Fermi level can range from below 1% (e.g. 0.5% for NiMnSb) over several percents (4.2% for (Ga,Mn)As) to 13% for MnBi.
description: 5 pages, 3 figures
EOCAD
Creators: name: Shen, Juan
Publisher: name: CNGB
Year: 2019
Subjects: Exome
Monoisolate

description: We submitted nearly 3000 whole exome sequencing samples. The processes of DNA extraction, purification, fragment, hybridization, library construction and sequencing were performed at the Beijing Genomics Institute (BGI) following the manufacturer’s instructions. Briefly, the qualified genomics DNA sample was randomly fragmented by Covaris technology and the size of the library fragments between 150bp and 250bp were got. DNA fragments were hybridized to the exome array (Agilent V5 kit) for enrichment and the captured library was then loaded on BGISEQ-500 sequencing platforms to perform high-throughput sequencing at the BGI. Finally, 100-bp reads were generated and the mean coverage was approximately 125×.
Forschungssupport, nicht nur zum herkömmlichen "Open Access" - Publizieren: Beratungen zum Forschungsdatenmanagement der UB Hildesheim (ONLINE). Data Publications!
Creators: name: Strauch-Davey, Annette
Publisher: name: Zenodo
Year: 2022
Subjects: FDM
Forschungsdaten
Forschungsdatenmanagement
research data
research data management
Open Science

description: Link zu den Beratungen im FDM: https://bbb.uni-hildesheim.de/b/ann-34u-ft7 Nach Anmeldung/Terminabsprache. Forschungsdatenmanagement als Digitaler Ort (in Niedersachsen). https://digitalagentur-niedersachsen.de/universitaetsbibliothek-hildesheim/ DIGITAL ERREICHBAR DIGITALLY AVAILABLE Beratungen nach Vereinbarung im FDM-Raum (BigBlueButton; die Stühle stehen schon bereit !) - https://bbb.uni-hildesheim.de/b/ann-34u-ft7 Consultations by appointment in the RDM room (BigBlueButton; the chairs are already there ! - https://bbb.uni-hildesheim.de/b/ann-34u-ft7 Look after your research data and research software now! Look after it all the way through to the archiving of valuable results in order to permit further research built on that existing data. We give support, training, tools, guidance and infrastructure. Annette Strauch-Davey (UB Hildesheim)
Effects of localization and amplification on distribution of intensity transmitted through random media
Creators: name: Yamilov, Alexey
name: Cao, Hui
Publisher: name: arXiv
Year: 2004
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We numerically study the statistical distribution of intensity transmitted through quasi-one dimensional random media by varying the dimensionless conductance $g$ and the amount of absorption or gain. Markedly non-Rayleigh distribution is found to be well fitted by the analytical formula of Nieuwenhuizen {\it et al}, Phys. Rev. Lett. {\bf 74}, 2674 (1995) with a single parameter $g^\prime$. We show that in the passive random system $g^\prime$ is uniquely related to $g$, while in amplifying/absorbing random media $g^\prime$ also depends on gain/absorption coefficient.
description: 4 pages, 4 figures, 1 table
Effect of Different Afforestation Treatments on Growth of Salix microstachya
Creators: name: WANG Minglin
name: WANG Minglin
Publisher: name: Unknown
Year: 2021
Subjects: subject: Agribusiness
subject: Afforestation treatment, Salix microstachya, Cutting, Research

description: [Objectives] As the desertification of river valleys in Nyingchi City, Tibet is relatively serious, and the area of river valley desertification continues to expand, the effect of different afforestation treatments on Salix microstachya cuttings is discussed. [Methods] The effect of different afforestation treatments on the survival rate and preservation rate of S. microstachya cuttings were investigated. [Results] Different afforestation treatments all improved the survival rate and preservation rate of S. microstachya cuttings to a certain extent, and among all the treatments, mulching treatment showed the most obvious improving effect. [Conclusions] This study provides a direction for the research of afforestation measures in river valleys in Nyingchi.
Absence of Phase Stiffness in the Quantum Rotor Phase Glass
Creators: name: Phillips, Philip
name: Dalidovich, Denis
Publisher: name: arXiv
Year: 2003
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: We analyze here the consequence of local rotational-symmetry breaking in the quantum spin (or phase) glass state of the quantum random rotor model. By coupling the spin glass order parameter directly to a vector potential, we are able to compute whether the system is resilient (that is, possesses a phase stiffness) to a uniform rotation in the presence of random anisotropy. We show explicitly that the O(2) vector spin glass has no electromagnetic response indicative of a superconductor at mean-field and beyond, suggesting the absence of phase stiffness. This result confirms our earlier finding (PRL, {\bf 89}, 27001 (2002)) that the phase glass is metallic, due to the main contribution to the conductivity arising from fluctuations of the superconducting order parameter. In addition, our finding that the spin stiffness vanishes in the quantum rotor glass is consistent with the absence of a transverse stiffness in the Heisenberg spin glass found by Feigelman and Tsvelik (Sov. Phys. JETP, {\bf 50}, 1222 (1979).
description: 8 pages, revised version with added references on the vanishing of the stiffness constant in the Heisenberg spin glass
Replicated Transfer Matrix Analysis of Ising Spin Models on `Small World' Lattices
Creators: name: Nikoletopoulos, T.
name: Coolen, A. C. C.
name: Perez-Castillo, I.
name: Skantzos, N. S.
name: Hatchett, J. P. L.
name: Wemmenhove, B.
Publisher: name: arXiv
Year: 2004
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: We calculate equilibrium solutions for Ising spin models on `small world' lattices, which are constructed by super-imposing random and sparse Poissonian graphs with finite average connectivity c onto a one-dimensional ring. The nearest neighbour bonds along the ring are ferromagnetic, whereas those corresponding to the Poisonnian graph are allowed to be random. Our models thus generally contain quenched connectivity and bond disorder. Within the replica formalism, calculating the disorder-averaged free energy requires the diagonalization of replicated transfer matrices. In addition to developing the general replica symmetric theory, we derive phase diagrams and calculate effective field distributions for two specific cases: that of uniform sparse long-range bonds (i.e. `small world' magnets), and that of (+J/-J) random sparse long-range bonds (i.e. `small world' spin-glasses).
description: 22 pages, LaTeX, IOP macros, eps figures
STaDA: Style Transfer as Data Augmentation
Creators: name: Zheng, Xu
name: Chalasani, Tejo
name: Ghosal, Koustav
name: Lutz, Sebastian
name: Smolic, Aljosa
Publisher: name: arXiv
Year: 2019
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Machine Learning (cs.LG)
subject: FOS: Computer and information sciences

description: The success of training deep Convolutional Neural Networks (CNNs) heavily depends on a significant amount of labelled data. Recent research has found that neural style transfer algorithms can apply the artistic style of one image to another image without changing the latter's high-level semantic content, which makes it feasible to employ neural style transfer as a data augmentation method to add more variation to the training dataset. The contribution of this paper is a thorough evaluation of the effectiveness of the neural style transfer as a data augmentation method for image classification tasks. We explore the state-of-the-art neural style transfer algorithms and apply them as a data augmentation method on Caltech 101 and Caltech 256 dataset, where we found around 2% improvement from 83% to 85% of the image classification accuracy with VGG16, compared with traditional data augmentation strategies. We also combine this new method with conventional data augmentation approaches to further improve the performance of image classification. This work shows the potential of neural style transfer in computer vision field, such as helping us to reduce the difficulty of collecting sufficient labelled data and improve the performance of generic image-based deep learning algorithms.
description: 14th International Conference on Computer Vision Theory and Applications, 2019
Generation of a 3D cardiac model based on 2D echocardiography video data
Creators: name: Amrani, Mounir
Publisher: name: ETH Zurich
Year: 2021

description: Echocardiography is a non-invasive medical imaging tool that serves to assess the cardiac functionality by producing images of the heart’s tissues and chambers using non-ionizing ultrasound waves. We propose a generative model that learns to produce personalized 4D (3D + time) heart models from 3D (2D + time) echocardiograms. We argue that such heart model may facilitate downstream tasks such as disease diagnosis and prediction. Our model is based on 2 Autoencoders and a Cycle GAN. The 2 Autoencoders process sequences of images (echocardiograms) and sequences of meshes (3D heart) to extract low dimensional representations of these sequences. We develop the Autoencoder model for processing sequences of meshes based on [1]. We also develop the Cycle GAN model which translates between the 2 data modalities (image sequences and mesh sequences) by translating between their latent space representations in a cycle-consistent manner. We evaluate the performance of the models we develop qualitatively and quantitatively and show that our full 3D to 4D model achieves promising results.
NIPT of α-thalassemia and β-thalassemia through population-based parental haplotyping
Creators: name: Chen, Chao
Publisher: name: CNGB
Year: 2021
Subjects: Variation
Targeted Locus (Loci)
Multiisolate
Medical

description: Noninvasive prenatal testing (NIPT) of recessive monogenic diseases heavily depends on the correct parental haplotypes. However, family-based genetic haplotyping (FBH) requires pedigrees, and molecular haplotyping remains a major challenge due to its high cost, long processing time, and complex procedure. Here, we propose a new approach termed population-based haplotyping NIPT (PBH-NIPT) using thalassemia as a prototype.
MOESM1 of Developing item banks to measure three important domains of health-related quality of life (HRQOL) in Singapore
Creators: name: Uy, Elenore
name: Xiao, Lynn
name: Xiaohui Xin
name: Yeo, Joanna
name: Pua, Yong Hao
name: Geok Lee
name: Kwan, Yu
name: Teo, Edmund
name: Janhavi Vaingankar
name: Mythily Subramaniam
name: Chan, Mei
name: Kumar, Nisha
name: Alcey Ang
name: Bautista, Dianne
name: Cheung, Yin
name: Thumboo, Julian
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: Additional file 1. In-depth interview probes.
THE WAYS OF RESOLVING ELECTORAL DISPUTES IN REPUBLIC OF UZBEKISTAN
Creators: name: Rajabova, Karima
Publisher: name: Zenodo
Year: 2024

description: Elections are part of democracy, and it is significant to effectively protect the rights and freedoms of citizens in this process. This article examines just such a situation, that is, the concept of election disputes established in the legislation of the Republic of Uzbekistan and the ways for resolving them in order to improve legislation in the field and increase the system of the mechanism for their implementation. In particular, through scientific and legal analysis, a theoretical analysis of election disputes, administrative and judicial procedures for their resolution, their features and implementation procedures are revealed.
Lefschetz Thimbles and Quantum Phases in Zero-Dimensional Bosonic Models
Creators: name: Bharathkumar, R.
name: Joseph, Anosh
Publisher: name: arXiv
Year: 2020
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: In this paper, by analyzing the underlying Lefschetz thimble structure, we study quantum phases in zero-dimensional scalar field theories with complex actions. Using first principles, we derive the Lefschetz thimble equations of these models, and discuss the issues when we apply the same calculations for more complicated systems. We also derive the conditional expressions involving relations among the parameters of the model, that would help us predict quantum phase transitions in these systems.
description: v3: 35 pages, 11 figures. References updated. Published version
Braids, 3-manifolds, elementary particles: number theory and symmetry in particle physics
Creators: name: Asselmeyer-Maluga, Torsten
Publisher: name: arXiv
Year: 2019
Subjects: subject: General Physics (physics.gen-ph)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: In this paper, we will describe a topological model for elementary particles based on 3-manifolds. Here, we will use Thurston's geometrization theorem to get a simple picture: fermions as hyperbolic knot complements (a complement $C(K)=S^{3}\setminus(K\times D^{2})$ of a knot $K$ carrying a hyperbolic geometry) and bosons as torus bundles. In particular, hyperbolic 3-manifolds have a close connection to number theory (Bloch group, algebraic K-theory, quaternionic trace fields), which~will be used in the description of fermions. Here, we choose the description of 3-manifolds by branched covers. Every 3-manifold can be described by a 3-fold branched cover of $S^{3}$ branched along a knot. In case of knot complements, one will obtain a 3-fold branched cover of the 3-disk $D^{3}$ branched along a 3-braid or 3-braids describing fermions. The whole approach will uncover new symmetries as induced by quantum and discrete groups. Using the Drinfeld--Turaev quantization, we will also construct a quantization so that quantum states correspond to knots. Particle properties like the electric charge must be expressed by topology, and we will obtain the right spectrum of possible values. Finally, we will get a connection to recent models of Furey, Stoica and Gresnigt using octonionic and quaternionic algebras with relations to 3-braids (Bilson--Thompson model).
description: 37 pages, 9 Figures The paper was planned to be self-contained. Therefore, I used only minor results and material from the papers 1812.08158, 1801.10419, 1709.03314, 1502.02087, 1006.2230 and 1601.06436
Treatment of Shrimp Effluent by Integrated Culture of Bivalves and Macroalgae
Creators: name: ZHOU Tingting
name: HE Jing
name: LIN Zhihua
name: HE Lin
name: ZHOU Tingting
name: HE Jing
name: LIN Zhihua
name: HE Lin
Publisher: name: Unknown
Year: 2021
Subjects: subject: Agribusiness
subject: Filter-feeding bivalves, IMTA, Gracilaria lichevoides, Aquaculture wastewater, Purification effect, Removal rate

description: [Objectives] To provide a theoretical basis for constructing the best species suitable for local shrimp-bivalves-algae IMTA through the screening of different bivalves and the determination of seaweed density. [Methods] The preliminary studies of different kind of bivalves and macroalgae (Gracilaria lichevoides) used for the purification of shrimp effluent were described. Through the screening of benthic bivalves, the best ratio of integrated culture of bivalves and algae was determined. [Results] Both bivalves and macroalgae had certain purification effects on aquaculture wastewater, but the effects significantly differed from species and breeding density. The removal rate of nutrient declined from Potamocorbula laevis, Sinonovacula constricta, Tegillarca granosa. The mixotrophic culture of 8 ind/L P. laevis and 120 g G. lichevoides had the highest efficiency of purification and removal rates of nutrient: NH4-N: 90.67%, TP: 86.18%, TN: 72.66%, NO3-N: 51.85%, respectively. There was a significant difference between the blank control group and the other three groups (P<0.01). The 8 ind/L + 120 g group was significantly higher than the 4 ind/L + 120 g group (P<0.05) in TP removal rate. Additionally, the difference between four groups was significant in the removal rate of NH4-N and TN (P<0.05), but 2 ind/L + 120 g group and 8 ind/L + 120 g group in the removal rate of NO3-N had no significant difference (P>0.05). [Conclusions] This research provides a reference for the use of filterable shellfish and large seaweed to treat aquaculture wastewater, and also provides the theoretical basis for constructing the local multi-level breeding structure.