cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
The impact of pyrazinamide resistance upon the treatment outcome of patients with multidrug-resistant tuberculosis in Karakalpakstan, Uzbekistan
Creators: name: Kuhlin, Johanna
name: Smith, Chris
name: Atadjan Khaemraev
name: Tigay, Zinaida
name: Parpieva, Nargiza
name: Achar, Jay
name: Hajek, Jan
name: Greig, Jane
name: Cros, Philipp Du
name: Moore, David
Publisher: name: F1000Research
Year: 2017

description: Pyrazinamide (PZA) is regarded an important agent in the management of multi-drug resistant tuberculosis (MDR-TB), and has been shown to reduce treatment duration for drug-sensitive TB. The current WHO recommendation is to include PZA in MDR-TB regimens unless there is evidence of resistance, however large-scale data supporting this recommendation are lacking. This study aimed to assess the effect of PZA resistance upon treatment outcome amongst MDR-TB patients treated with a full intensive phase PZA regimen. It also looks at the effect of PZA treatment duration upon treatment outcome amongst MDR-TB patients with PZA strains of unknown resistance.
Joint production of prime/boost pairs of Fowlpox Virus and Modified Vaccinia Ankara recombinants carrying the same transgene
Creators: name: Soprana, Elisa
name: Panigada, Maddalena
name: Knauf, Mathias
name: Radaelli, Antonia
name: Vigevani, Luisa
name: Palini, Alessio
name: Villa, Chiara
name: Malnati, Mauro
name: Cassina, Giulia
name: Kurth, Reinhard
name: Norley, Stephen
name: Siccardi, Antonio G.
Publisher: name: Robert Koch-Institut, Infektionskrankheiten / Erreger
Year: 2011
Subjects: subject: Cell Line
subject: Humans
subject: Animals
subject: Influenza A Virus
subject: Viral Proteins/genetics
subject: Genetic Vectors
subject: Vaccinia virus/genetics
subject: Chickens
subject: H5N1 Subtype/genetics
subject: Recombinant poxviruses
subject: Prime/boost pairs
subject: Drug Carriers
subject: Fowlpox virus/genetics
subject: Gene Therapy/methods
subject: Transduction Genetic
subject: Transgenes Vaccines Synthetic/genetics
subject: Viral Vaccines/genetics
subject: 610 Medizin

description: Pairs of recombinant MVA (Modified Vaccinia Ankara) and FPV (Fowlpox Virus) expressing the same transgene are reasonable candidates for prime/boost regimens, because cross-reacting immune responses between the two vectors, both non-replicative in mammalian hosts, are very limited. The acceptor virus FPD-Red, a derivative of FPV, carrying a red fluorescent protein gene flanked by the homology regions of MVA deletion III, was constructed. The same MVA Transfer Plasmid Green, designed to insert transgenes into the MVA deletion III locus, can therefore be used to transfer transgenes into both acceptor viruses MVA-Red and FPD-Red with the described recently Red-to-Green gene swapping method. Cells infected by either recombinant virus can be sorted differentially by a simple and reliable FACS-based purification protocol. The procedure is carried out in primary chick embryo fibroblasts grown in serum-free media and was applied to the production of three rMVA/rFPV pairs expressing the H5N1 avian influenza antigens M1, M2 and NP. The viral genes were human codon-optimized and expressed at high levels in both chick and mammalian cells. Both single-step and multiple-step growth analyses showed no significant differences in growth due to the transgenes in either rMVA or rFPV derivatives.
Effectiveness of a comprehensive HIV and tuberculosis prevention, screening and management programme in Malawi prisons
Creators: name: Mendelsohn, Simon
name: Aluda, Caroline
name: Ortuno, Reinaldo
name: Shigayeva, Altynay
name: Hilderbrand, Katherine
name: Goemaere, Eric
Publisher: name: F1000Research
Year: 2017

description: Due to a lack of resources, discrimination and stigma, Malawi prisoners are a neglected population and are deprived of basic healthcare. In 2014 MSF introduced a comprehensive package of interventions to prevent, screen and treat HIV and TB in these prisons. This poster details the three-stage model of care implemented, and reports the results of an investigation into the impact of these interventions on TB case finding and treatment, the HIV cascade of care, and HIV/TB mortality in the prisons.
Supplementary Material from Pigment-dispersing factor neuropeptides act as multifunctional hormones and modulators in tardigrades
Creators: name: Dutta, Soumi
name: Hering, Lars
name: Grollmann, Milena M.
name: Metzendorf, Niklas
name: Gross, Vladimir
name: Arakawa, Kazuharu
name: Neupert, Susanne
name: Stengl, Monika
name: Herberg, Friedrich
name: Mayer, Georg
Publisher: name: The Royal Society
Year: 2025
Subjects: classificationCode: 320999
subject: Neurosciences not elsewhere classified

description: electroninc_supplementary_materials.pdf
HIV treatment outcomes in a conflict setting: results from a five-year programme in the Central African Republic
Creators: name: Crellen, Thomas
name: Kongolo, Dieudonné
name: Zeydner, Joke
name: Pennec, Olivier
name: Gieger, Keri
name: Piening, Turid
name: Ssonko, Charles
name: Siddiqui, Ruby
Publisher: name: F1000Research
Year: 2017

description: The Central African Republic (CAR) has low access to anti-retroviral therapy (ART), facing a number of challenges in healthcare provision including instability and civil conflict, along with a lack of infrastructure outside of the capital Bangui. Consequently, mortality rate per 1000 people living with HIV is the highest in the world. These MSF researchers detail treatment outcomes from a HIV patient cohort on a program of ART provision in a rural setting in CAR for >5 years, reporting a resulting survival rate after 12 months equal to or greater than values reported from studies in more stable African settings.
sj-docx-1-vmj-10.1177_1358863X211020822 – Supplemental material for Effects of structured home-based exercise training on circulating endothelial progenitor cells and endothelial function in patients with intermittent claudication
Creators: name: Pasqualini, Leonella
name: Bagaglia, Francesco
name: Ministrini, Stefano
name: Frangione, Maria Rosaria
name: Leli, Christian
name: Siepi, Donatella
name: Lombardini, Rita
name: Marini, Ettore
name: Naeimi Kararoudi, Meisam
name: Piratinskiy, Alexander
name: Pirro, Matteo
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: Cardiology
subject: 110323 Surgery
subject: FOS: Clinical medicine

description: Supplemental material, sj-docx-1-vmj-10.1177_1358863X211020822 for Effects of structured home-based exercise training on circulating endothelial progenitor cells and endothelial function in patients with intermittent claudication by Leonella Pasqualini, Francesco Bagaglia, Stefano Ministrini, Maria Rosaria Frangione, Christian Leli, Donatella Siepi, Rita Lombardini, Ettore Marini, Meisam Naeimi Kararoudi, Alexander Piratinskiy and Matteo Pirro in Vascular Medicine
Fruit and vegetable intake in Germany
Creators: name: Mensink, Gert
name: Truthmann, Julia
name: Rabenberg, Martina
name: Heidemann, Christin
name: Haftenberger, Marjolein
name: Schienkiewitz, Anja
name: Richter, Almut
Publisher: name: Robert Koch-Institut, Epidemiologie und Gesundheitsberichterstattung
Year: 2013
Subjects: subject: Health survey
subject: Adults
subject: Fruit
subject: Vegetables
subject: ood frequency
subject: 610 Medizin

description: To date, the recommendations of the German Nutrition Society on fruit and vegetable intake have not been met by the majority of the population. In the first wave of the “German Health Interview and Examination Survey for Adults” (DEGS1), which was conducted from 2008 to 2011, food consumption was determined with a validated food frequency questionnaire in a representative random sample of the 18–79-year-old resident population of Germany (n=7,116). The number of portions of fruit and vegetables consumed on average every day and the number of persons meeting the recommended five portions of fruit and vegetables per day were calculated. On average, women consume 3.1 and men 2.4 portions of fruit and vegetables per day. Moreover, 15% of women and 7% of men reach the recommended quantity of five portions per day. Fruit intake increases in both men and women up to the age of 60–69 years. About 39% of women and 25% of men consume at least three portions of fruit and vegetables per day. The proportion of men and women who consume at least three portions per day tends to increase with rising socioeconomic status. Although the intake of fruit has increased slightly compared to previous surveys, the percentage of persons who consume five portions of fruit and vegetables per day is still very low.
Prevalence of depressive symptoms and diagnosed depression among adults in Germany
Creators: name: Busch, Markus
name: Maske, Ulrike
name: Ryl, Livia
name: Schlack, Robert
name: Hapke, Ulfert
Publisher: name: Robert Koch-Institut, Epidemiologie und Gesundheitsberichterstattung
Year: 2013
Subjects: subject: Prevalence
subject: Health survey
subject: Population
subject: Depression
subject: Depressive symptoms
subject: 610 Medizin

description: In the German Health Interview and Examination Survey (DEGS1), current depressive symptoms were assessed with the Patient Health Questionnaire (PHQ-9) in a representative population-based sample of 7,988 adults 18–79 years old. In addition previously diagnosed depression was assessed by physician interview. The prevalence of current depressive symptoms (PHQ-9 ≥10 points) is 8.1% (women 10.2%; men 6.1%). For both sexes, the prevalence is highest among 18- to 29-year-olds and decreases with age. Persons with higher socioeconomic status (SES) are less likely to have current depressive symptoms. The lifetime prevalence of diagnosed depression is 11.6% (women 15.4%; men 7.8%) and is highest among persons 60–69 years old. The 12-month prevalence is 6.0% (women 8.1%; men 3.8%) and is highest among 50–59 year olds. In women, but not in men, prevalences decrease with increasing SES. The results describe the distribution of two important aspects of depression among the adult population in Germany and confirm previously observed associations with age, gender and SES.
Birth Point of Care (POC) HIV polymerase chain reaction testing in a primary care setting, South Africa
Creators: name: Nelson, Aurelie
name: Cassidy, Tali
name: Duran, Laura Trivino
name: Shroufi, Amir
name: Cutsem, Gilles Van
name: Sarah-Jane Steele
name: Cox, Vivian
name: Wedderburn, Catherine
name: Cotton, Mark
name: Giddy, Janet
name: Maritz, Jean
Publisher: name: F1000Research
Year: 2017

description: Birth polymerase chain reaction (PCR) in HIV-exposed infants was introduced in June 2015 in South Africa. Birth Point of Care (POC) PCR aims to prevent attrition between testing and result delivery leading to accelerated ART initiation. However, there is little data on the impact of either birth PCR or POC technology on longer term retention in care. This poster describes the lessons learnt by researchers from implementing POC PRC testing at birth in a South African primary care clinic with 34% HIV antenatal prevalence. It also describes the impact of birth PCR (including POC) on retention in care at 6-10 weeks.
Konstruktion und Validierung eines allgemeinen Index für die Arbeitsbelastung in beruflichen Tätigkeiten anhand von ISCO-88 und KldB-92
Creators: name: Kroll, Lars Eric
Publisher: name: Robert Koch-Institut, Epidemiologie und Gesundheitsberichterstattung
Year: 2011
Subjects: subject: Validierung
subject: Konstruktion
subject: Arbeitsbelastung
subject: ISCO-88
subject: KldB-92
subject: 610 Medizin

description: In diesem Beitrag werden zusammenfassende Skalen zur allgemeinen, physischen und psychosozialen Arbeitsbelastung (ABges, ABphy, ABpsy) auf Basis der Erwerbstätigenbefragung 2006 für die Berufsklassifikationen KldB-92 und ISCO-88 entwickelt und validiert. Ziel ist es, eine leicht anzuwendende Kontrollvariable für Studien bereitzustellen, in denen keine umfangreichen Instrumente zur Messung von Arbeitsbelastungen eingesetzt werden können. Einleitend wird ein Überblick über verschiedene Formen von Arbeitsbelastungen sowie deren Messung gegeben. Anschließend werden die drei Skalen anhand hierarchischer Regressionsmodelle in einem dreistufigen Verfahren entwickelt. Der Index wird zuletzt auf Basis der Daten der BIBB/BAuA-Erwerbstätigenbefragung 2006 und des Telefonischen Gesundheitssurveys „Gesundheit in Deutschland Aktuell“ (GEDA) 2009 des Robert Koch-Instituts anhand von Gesundheitsindikatoren intern und extern validiert. Insgesamt erweist sich der Index bei der Analyse von gesundheitlichen Beeinträchtigungen, von wahrgenommenen Gesundheitsrisiken am Arbeitsplatz und bei der Analyse von krankheitsbedingten Fehlzeiten auf Basis beider Datensätze als aussagekräftig. Er wird daher für Forschungszwecke bereitgestellt und lässt sich anhand der Schlüsselvariablen KldB-92 oder ISCO-88 beliebigen Datensätzen zuspielen.
description: This paper describes the construction and validation of comprehensive scales for overall, physical and psycho-social job demands (ABges, ABphy, ABpsy) that were constructed using a large-scale representative survey from 2006 conducted by the German Federal Institute for Vocational Education and Training (BIBB). The overall goal is to provide comprehensive scales that can be applied in studies that are not able to measure job demands more thoroughly. The scales are based on standard occupational classifications. They were constructed using multilevel regression models in a three-stage procedure. The resulting index has been validated using seven different health indicators with the data of the German BIBB/ BAuA-workforce survey and additional data of the GEDA: German Telephone Health Survey 2008/2009. Results indicated significant associations with health outcomes such as self-perceived health, perceived health risks at work or sick absence days. The index is free to use for scientific research and can be matched to any data source with data on occupations classified by KldB-92 or ISCO-88.
Additional file 1 of Echocardiographic abnormalities and joint hypermobility in Chinese patients with Osteogenesis imperfecta
Creators: name: Mei, Yazhao
name: Jiang, Yunyi
name: Shen, Li
name: Meng, Zheying
name: Zhang, Zhenlin
name: Zhang, Hao
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Virology

description: Supplementary Material 1 Characteristics of OI patients with echocardiographic abnormalities
Supplementary Material from Pigment-dispersing factor neuropeptides act as multifunctional hormones and modulators in tardigrades
Creators: name: Dutta, Soumi
name: Hering, Lars
name: Grollmann, Milena M.
name: Metzendorf, Niklas
name: Gross, Vladimir
name: Arakawa, Kazuharu
name: Neupert, Susanne
name: Stengl, Monika
name: Herberg, Friedrich
name: Mayer, Georg
Publisher: name: The Royal Society
Year: 2025
Subjects: classificationCode: 320999
subject: Neurosciences not elsewhere classified

description: suppl_figure_6.pdf
sj-pdf-1-wso-10.1177_17474930211025436 - Supplemental material for Thrombolysis outcomes according to arterial characteristics of acute ischemic stroke by alteplase dose and blood pressure target
Creators: name: Zhou, Zien
name: Xia, Chao
name: Mair, Grant
name: Delcourt, Candice
name: Yoshimura, Sohei
name: Liu, Xiaosheng
name: Chen, Zengai
name: Malavera, Alejandra
name: Carcel, Cheryl
name: Chen, Xiaoying
name: Wang, Xia
name: Al-Shahi Salman, Rustam
name: Robinson, Thompson G
name: Lindley, Richard I
name: Chalmers, John
name: Wardlaw, Joanna M
name: Parsons, Mark W
name: Demchuk, Andrew M
name: Anderson, Craig S
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: Cardiology
subject: Medicine
subject: Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine

description: Supplemental material, sj-pdf-1-wso-10.1177_17474930211025436 for Thrombolysis outcomes according to arterial characteristics of acute ischemic stroke by alteplase dose and blood pressure target by Zien Zhou, Chao Xia, Grant Mair, Candice Delcourt, Sohei Yoshimura, Xiaosheng Liu, Zengai Chen, Alejandra Malavera, Cheryl Carcel, Xiaoying Chen, Xia Wang, Rustam Al-Shahi Salman, Thompson G Robinson, Richard I Lindley, John Chalmers, Joanna M Wardlaw, Mark W Parsons, Andrew M Demchuk and Craig S Anderson in International Journal of Stroke
sj-docx-1-mdm-10.1177_0272989X211019040 – Supplemental material for The Application of Multicriteria Decision Analysis Methods in Health Care: A Literature Review
Creators: name: Khan, Ilyas
name: Pintelon, Liliane
name: Martin, Harry
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: 111799 Public Health and Health Services not elsewhere classified
subject: 160807 Sociological Methodology and Research Methods
subject: FOS: Sociology

description: Supplemental material, sj-docx-1-mdm-10.1177_0272989X211019040 for The Application of Multicriteria Decision Analysis Methods in Health Care: A Literature Review by Ilyas Khan, Liliane Pintelon and Harry Martin in Medical Decision Making
sj-pdf-1-cep-10.1177_03331024211021792 - Supplemental material for Migraine and the development of additional psychiatric and pain disorders in the transition from adolescence to adulthood
Creators: name: Gerstl, Lucia
name: Tadych, Natalie
name: Heinen, Florian
name: Kainz, Christine
name: Bonfert, Michaela V
name: Hannibal, Iris
name: Huss, Kristina
name: Ruscheweyh, Ruth
name: Straube, Andreas
name: Obermeier, Viola
name: von Kries, Rüdiger
name: Landgraf, Mirjam N
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 110306 Endocrinology
subject: FOS: Clinical medicine
subject: 110904 Neurology and Neuromuscular Diseases
subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: 110319 Psychiatry (incl. Psychotherapy)
subject: Neuroscience

description: Supplemental material, sj-pdf-1-cep-10.1177_03331024211021792 for Migraine and the development of additional psychiatric and pain disorders in the transition from adolescence to adulthood by Lucia Gerstl, Natalie Tadych, Florian Heinen, Christine Kainz, Michaela V Bonfert, Iris Hannibal, Kristina Huss, Ruth Ruscheweyh, Andreas Straube, Viola Obermeier, Rüdiger von Kries and Mirjam N Landgraf in Cephalalgia
Assessment of public health issues of migrants at the Greek-Turkish border, April 2011
Creators: name: Mertens, Elke
name: Rockenschaub, G.
name: Economopoulou, A.
name: Kreidl, P.
Publisher: name: Robert Koch-Institut, Infektionsepidemiologie
Year: 2012
Subjects: subject: Emigration and Immigration
subject: Humans
subject: Female
subject: Public Health
subject: Male
subject: Interviews as Topic
subject: World Health Organization
subject: Greece
subject: Health Status
subject: Social Support
subject: Turkey
subject: Needs Assessment
subject: Health Services Accessibility
subject: Hygiene
subject: Transients and Migrants*/psychology
subject: 610 Medizin

description: A joint mission to assess the public health situation of migrants in Greek detention centres was undertaken in April 2011 by the European Centre for Disease Prevention and Control (ECDC) and the World Health Organization (WHO) Regional Office for Europe. The assessment visit follows the increased migration to the Evros prefecture, Eastern Macedonia and Thrace region, at the Greek-Turkish border where large numbers of migrants are entering Greece via the Evros River, a natural border. Migrants are housed in local detention centres. The main problem in detention centres are the substandard hygiene conditions, especially overcrowding and lack of personal hygiene facilities, lack of basic supplies and lack of access to fresh air and physical exercise. As the migration route via the Evros region is increasingly used since 2009, and due to the unstable political situation in North Africa and the Middle East, an increased influx of migrants was to be expected with the falling water levels of the Evros River in summer, resulting in further deterioration of the already critical situation in the Thrace region’s detention centres.
Infektionsepidemiologische Ausbildungs- und Trainingsprogramme FETP und EPIET
Creators: name: Bremer, Viviane
Publisher: name: Robert Koch-Institut, Infektionsepidemiologie
Year: 2005
Subjects: subject: Surveillance
subject: EPIET
subject: Infektionsepidemiologie
subject: Ausbruchsuntersuchungen
subject: Training
subject: European Centre for Disease Prevention and Control
subject: FETP
subject: Field epidemiology
subject: Outbreak investigations
subject: 610 Medizin

description: Das deutsche Field Epidemiology Training Pro gramme (FETP) und das europäische European Programme for Intervention Epidemiology Training (EPIET) wurden gegründet, um ein Netzwerk von Epidemiologen für die Überwachung und Kontrolle von Infektionskrankheiten auszubilden. Innerhalb von 2 Jahren müssen die Trainees am Robert Koch-Institut oder an europäischen Gastinstituten Ausbruchsuntersuchungen, Surveillance- und Forschungsprojekte durchführen und die Ergebnisse veröffentlichen. Seit 1995 haben 22 FETP und 94 EPIET-Trainees zahlreiche Ausbruchsuntersuchungen, Surveillance- und Forschungsprojekte zu Erregern von z. B. Salmonellosen, der Influenza, SARS und Vogelgrippe durchgeführt und veröffentlicht. Zurzeit sind 70% der FETP- und EPIET-Absolventen auf regionaler, nationaler oder internationaler Ebene in Schlüsselpositionen der Infektionskontrolle tätig. So wohl das deutsche FETP- als auch das europäische EPIET-Programm bieten eine hochwertige, praxisnahe Ausbildung in angewandter Epidemiologie. Die Erfahrung der Absolventen wird in das neue European Centre for Disease Prevention and Control (ECDC) einfließen und die zukünftige Richtung der Infektionsepidemiologie in Deutschland und Europa bestimmen.
description: The German Field Epidemiology Training Programme (FETP) and the European Programme for Intervention Epidemiology Training (EPIET) were founded to develop a network of epidemiologists for the surveillance and control of communicable diseases. During their 2-year training, FETP or EPIET fellows are based at the Robert Koch-Institut or other European host institutes and have to conduct outbreak investigations, carry out surveillance and research projects and publish the results. Since 1995, all 22 FETP and 94 EPIET fellows have conducted and published numerous outbreak investigations, surveillance and research projects, for example on pathogens inducing salmonellosis, influenza, SARS or avian influenza. Currently, 70% of FETP and EPIET alumni are working in key positions in communicable disease control on a regional, national or international level. The German FETP and the European EPIET programme offer high quality practical training in applied epidemiology. The expert knowledge of the alumni of both training programmes will be incorporated into the new European Centre for Disease Control (ECDC) and determine the future direction of infectious disease epidemiology in Germany and Europe.
Supplementary Material from Pigment-dispersing factor neuropeptides act as multifunctional hormones and modulators in tardigrades
Creators: name: Dutta, Soumi
name: Hering, Lars
name: Grollmann, Milena M.
name: Metzendorf, Niklas
name: Gross, Vladimir
name: Arakawa, Kazuharu
name: Neupert, Susanne
name: Stengl, Monika
name: Herberg, Friedrich
name: Mayer, Georg
Publisher: name: The Royal Society
Year: 2025
Subjects: classificationCode: 320999
subject: Neurosciences not elsewhere classified

description: suppl_figure_15.pdf
Citation File Format (Cff) - Specifications
Creators: name: Druskat, Stephan
name: Haines, Robert
name: Baker, James
Publisher: name: Zenodo
Year: 2018
Subjects: citation file format, CFF, citation files, software citation, format, YAML, software sustainability, research software

description: The Citation File Format (CFF) is a human- and machine-readable - and human-writable - format for CITATION files. These files provide citation metadata for (research and scientific) software. The format aims to support use cases for software citation described in [1]. CFF is serialized in YAML 1.2, and is therefore Unicode-based and cross-language (in terms of both natural language scripts and programming languages). This specification, together with the Unicode standard for characters, aims to provide all the information necessary to understand CFF, and to use (i.e., write) and re-use (i.e., read, validate, convert from) it. These specifications are maintained openly at https://github.com/citation-file-format/citation-file-format.

[1] A. M. Smith, D. S. Katz, K. E. Niemeyer, and FORCE11 Software Citation Working Group, “Software citation principles,” PeerJ Computer Science, vol. 2, p. e86, Sep. 2016 [Online]. Available: https://doi.org/10.7717/peerj-cs.86
description: {"references": ["A. M. Smith, D. S. Katz, K. E. Niemeyer, and FORCE11 Software Citation Working Group, \"Software citation principles,\" PeerJ Computer Science, vol. 2, p. e86, Sep. 2016 [Online]. Available: https://doi.org/10.7717/peerj-cs.86", "S. Druskat, \"Track 2 Lightning Talk: Should CITATION files be standardized?\" in Proceedings of the Workshop on Sustainable Software for Science: Practice and Experiences (WSSSPE5.1), 2017 [Online]. Available: https://doi.org/10.6084/m9.figshare.3827058", "R. Wilson, \"Encouraging citation of software - introducing CITATION files.\" 2013 [Online]. Available: https://www.software.ac.uk/blog/2013-09-02-encouraging-citation-software-introducing-citation-files", "O. Ben-Kiki, C. Evans, and I. d\u00f6t Net, \"YAML Ain't Markup Language (YAML) Version 1.2. 3rd Edition, Patched at 2009-10-01.\" 2009 [Online]. Available: http://yaml.org/spec/1.2/spec.html", "J.-M. Hufflen, \"Names in bibtex and mlBibTeX,\" TUGboat, vol. 27, no. 2, pp. 243\u2013253, Nov. 2006 [Online]. Available: https://www.tug.org/TUGboat/tb27-2/tb87hufflen.pdf"]}
Knowledge of viral load and treatment failure amongst patients on second-line and third-line antiretroviral therapy regimens: a mixed methods study in MSF programmes in Malawi, Kenya and Mozambique
Creators: name: Burns, Rose
name: Schramm, Birgit
name: Borges, Joana
name: Vandenbulcke, Alexandra
name: Blasco, Philippe
name: Iza Ciglenecki
name: Jecinta Oruko
name: Szumilin, Elisabeth
name: Mukui, Irene
name: Pasquier, Estelle
name: Molfino, Lucas
name: Carnimeo, Valentina
name: Ankur Rakesh
name: Loide Cossa
name: Ardiet, Denis
name: Thandikile Zimba
name: Thokozani Kalua
name: Paulino, Paula
name: Wringe, Alison
Publisher: name: F1000Research
Year: 2017

description: The number of patients requiring second- and third-line antiretroviral therapy (ART) regimens is increasing in MSF-supported HIV care and treatment programs across Africa. Understanding of the elements on which to base adherence interventions for these treatment-experienced patients is limited. As part of this study researchers investigated patients’ understanding of the relationship between treatment failure, viral load and adherence among those on 2nd and 3rd line ART regimens in MSF programmes in Kenya, Mozambique and Malawi.
Supplementary Material from Pigment-dispersing factor neuropeptides act as multifunctional hormones and modulators in tardigrades
Creators: name: Dutta, Soumi
name: Hering, Lars
name: Grollmann, Milena M.
name: Metzendorf, Niklas
name: Gross, Vladimir
name: Arakawa, Kazuharu
name: Neupert, Susanne
name: Stengl, Monika
name: Herberg, Friedrich
name: Mayer, Georg
Publisher: name: The Royal Society
Year: 2025
Subjects: classificationCode: 320999
subject: Neurosciences not elsewhere classified

description: suppl_figure_4 .pdf
Substrate Polarization Alters the Jahn-Teller Effect in a Single Molecule
Creators: name: Frankerl, Moritz
name: Patera, Laerte L.
name: Giselbrecht, Felix
name: Frederiksen, Thomas
name: Repp, Jascha
name: Donarini, Andrea
Publisher: name: Universität Regensburg
Year: 2025
Subjects: subject: 530 Physik
subject: 540 Chemie

description: Charge-state transitions of a single Cu-phthalocyanine molecule adsorbed on an insulating layer of NaCl on Cu(111) are probed by means of alternate charging scanning tunneling microscopy. Real-space imaging of the electronic transitions reveals the Jahn-Teller distortion occurring upon formation of the first and second anionic charge states. The experimental findings are rationalized by a theoretical many-body model that highlights the crucial role played by the substrate. The latter enhances and stabilizes the intrinsic Jahn-Teller distortion of the negatively charged molecule hosting a degenerate pair of single-particle frontier orbitals. Consequently, two excess electrons are found to occupy, in the ground state, the same localized orbital, despite a larger Coulomb repulsion than the one for the competing delocalized electronic configuration. Control over the charging sequence by varying the applied bias voltage is also predicted.
Additional file 1 of Genetic characterization of schistosome species from cattle in Côte d’Ivoire
Creators: name: Giovanoli Evack, Jennifer
name: Kouadio, Jules N.
name: Achi, Louise Y.
name: Bonfoh, Bassirou
name: N’Goran, Eliézer K.
name: Zinsstag, Jakob
name: Utzinger, Jürg
name: Balmer, Oliver
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1: Table S1. ID, life stage, location of collection and results of genotyping and sequencing of all Schistosoma samples. Table S2. Statistical comparison by linear model of between- versus within-host genetic diversity in Ferkessédougou. Table S3. FST and RST of populations of Schistosoma from within eight cattle hosts. Fig. S1. Determination of best K (largest Delta K) for structure analyses.
The Jvla View Of Nls1S
Creators: name: Berton, Marco
Publisher: name: Zenodo
Year: 2018
Subjects: NLS1

description: I will present the results of the largest radio survey to date dedicated to narrow-line Seyfert 1 galaxies (NLS1). We observed 72 objects with JVLA in A-configuration, obtaining high-resolution maps with unprecedented sensitivity. The sample includes both formally radio-quiet and radio-loud NLS1s, confirming a substantial morphological difference between these two classes at fixed flux sensitivity. Furthermore, I will show how, unlike classical blazars, flat-spectrum radio-loud NLS1s do not show strong diffuse emission, suggesting that NLS1s have underdeveloped radio lobes, possibly because of their young age. Finally, I will discuss these results in the frame of an orientation-based unification of young radio-loud AGN.
sj-pdf-2-trc-10.1177_19400829211023265 - Supplemental material for Ethnozoology Mediating Knowledge About Sea Turtles and Environmental Education Strategies in the North-Central Coast of Rio De Janeiro, Brazil
Creators: name: Rêgo, Raísa da Silva Costa
name: Cutrim, Caio Henrique Gonçalves
name: Miranda, Amanda Soares
name: Campos, Juliana Loureiro Almeida
name: Araújo, Vinícius Albano
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Geography
subject: 120505 Regional Analysis and Development
subject: FOS: Social and economic geography

description: Supplemental material, sj-pdf-2-trc-10.1177_19400829211023265 for Ethnozoology Mediating Knowledge About Sea Turtles and Environmental Education Strategies in the North-Central Coast of Rio De Janeiro, Brazil by Raísa da Silva Costa Rêgo, Caio Henrique Gonçalves Cutrim, Amanda Soares Miranda, Juliana Loureiro Almeida Campos and Vinícius Albano Araújo in Tropical Conservation Science
Structured Light Phenomena: Resonant Fields in Natural Systems – Superseded Version
Creators: name: Delaney, Susan
Publisher: name: Zenodo
Year: 2025
Subjects: subject: Structured Light Phenomena
subject: Harmonic Light Structures
subject: Plasma Physics
subject: Electromagnetic Resonance
subject: Photonic Coherence
subject: Fractal Scaling
subject: Self-Organization
subject: Quantum Cosmology
subject: Heliospheric Physics
subject: Solar Physics
subject: Solar-Terrestrial Coupling
subject: Schumann Resonance
subject: Geomagnetic Anomalies
subject: Environmental Field Interactions
subject: Perceptual Modulation
subject: Nonlocal Coherence
subject: Interdisciplinary Field Theory
subject: Quantum Coherence
subject: Quantum physics
subject: Plasma physics
subject: Solar physics

description: _This version is no longer current. Please refer to : https://doi.org/10.5281/zenodo.15385663 for the final version._

 

This study investigates Structured Light Phenomena (SLP) observed under geomagnetically stable, low-turbulence conditions. Documented events revealed reproducible photonic structures exhibiting radial coherence, quantized spectral bands and phase-locked spatial organization. Analytical models drawn from magnetohydrodynamics, nonlinear optics and quantum field theory describe structured light phenomena as arising from Alfvénic wave propagation, harmonic resonance structuring and plasma-field interactions. Spectral decomposition demonstrates coherence with Schumann resonance harmonics and geomagnetic flux boundaries, supporting the interpretation of structured light phenomena as self-organized macroscopic coherence states arising from nonlocal electromagnetic coupling and atmospheric boundary-layer resonance. These findings establish a quantitative framework linking photonic coherence to mesoscale plasma dynamics, geophysical field structures and resonance-governed energy localization processes. Quantitative models drawn from plasma physics, nonlinear optics and electromagnetic field theory are applied to evaluate and support the observed phenomena.
Accelerated deep self-supervised ptycho-laminography for three-dimensional nanoscale imaging of integrated circuits
Creators: name: Kang, Iksung
name: Jiang, Yi
name: Holler, Mirko
name: Guizar-Sicairos, Manuel
name: Levi, A. F. J.
name: Klug, Jeffrey
name: Vogt, Stefan
name: Barbastathis, George
Publisher: name: arXiv
Year: 2023
Subjects: subject: Image and Video Processing (eess.IV)
subject: Machine Learning (cs.LG)
subject: Optics (physics.optics)
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: FOS: Computer and information sciences
subject: FOS: Physical sciences

description: Three-dimensional inspection of nanostructures such as integrated circuits is important for security and reliability assurance. Two scanning operations are required: ptychographic to recover the complex transmissivity of the specimen; and rotation of the specimen to acquire multiple projections covering the 3D spatial frequency domain. Two types of rotational scanning are possible: tomographic and laminographic. For flat, extended samples, for which the full 180 degree coverage is not possible, the latter is preferable because it provides better coverage of the 3D spatial frequency domain compared to limited-angle tomography. It is also because the amount of attenuation through the sample is approximately the same for all projections. However, both techniques are time consuming because of extensive acquisition and computation time. Here, we demonstrate the acceleration of ptycho-laminographic reconstruction of integrated circuits with 16-times fewer angular samples and 4.67-times faster computation by using a physics-regularized deep self-supervised learning architecture. We check the fidelity of our reconstruction against a densely sampled reconstruction that uses full scanning and no learning. As already reported elsewhere [Zhou and Horstmeyer, Opt. Express, 28(9), pp. 12872-12896], we observe improvement of reconstruction quality even over the densely sampled reconstruction, due to the ability of the self-supervised learning kernel to fill the missing cone.
description: 13 pages, 5 figures, 1 table
Additional file 1 of GDF-15: a novel biomarker of heart failure predicts short-term and long-term heart-failure rehospitalization and short-term mortality in patients with acute heart failure syndrome
Creators: name: Kosum, Paisit
name: Siranart, Noppachai
name: Mattanapojanat, Natthinee
name: Phutinart, Somkiat
name: Kongruttanachok, Narisorn
name: Sinphurmsukskul, Supanee
name: Siwamogsatham, Sarawut
name: Puwanant, Sarinya
name: Ariyachaipanich, Aekarach
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Supplementary Material 1.
Soziale Ungleichheit des Rauchverhaltens in Deutschland
Creators: name: Lampert, Thomas
name: Thamm, Michael
Publisher: name: Robert Koch-Institut, Epidemiologie und Gesundheitsberichterstattung
Year: 2004
Subjects: subject: Soziale Ungleichheit
subject: Rauchen
subject: Tabakkontrollpolitik
subject: Bundes-Gesundheitssurvey 1998
subject: Raucherentwöhnung
subject: Smoking
subject: Smoking cessation
subject: Social inequality
subject: Tobacco control policy
subject: National Health Survey 1998
subject: 610 Medizin

description: Anhand von Daten des Bundes-Gesundheitssurveys 1998 wird der Einfluss alternativer Indikatoren sozialer Ungleichheit auf das Rauchverhalten der 18- bis 79-jährigen Bevölkerung in Deutschland untersucht. Danach rauchen die Angehörigen sozial benachteiligter Bevölkerungsgruppen nicht nur häufiger, ihnen fällt es offenbar auch schwerer, das Rauchen wieder aufzugeben. Besonders deutlich kommt dies im mittleren Lebensalter zum Ausdruck, während im höheren Alter nur noch schwache Unterschiede beobachtet werden können. Multivariate Analysen weisen bei Männern wie Frauen vor allem die Schulbildung als Determinante des Rauchverhaltens aus. Der Einfluss des Einkommens und der beruflichen Stellung ist vergleichsweise gering. Die Ergebnisse sprechen dafür, dass die im Gesundheitsstatus und in der Lebenserwartung zutage tretende Chancenungleichheit zu einem Teil auf unterschiedliche Rauchgewohnheiten zurückzuführen ist, und unterstreichen damit die Notwendigkeit zielgruppenspezifischer Interventionen der Tabakprävention und Tabakkontrollpolitik.
description: Data of the National Health Survey 1998 are used to analyze the impact of alternative indicators of social inequality on smoking of the 18- to 79-year-old population in Germany. The members of socially disadvantaged groups not only smoke more frequently, they show also lower rates in smoking cessation. This is most obvious in middle age while only small differences can be observed at older ages. Multivariate analyses evidence primarily education as a determinant of smoking among men and women. The effects of income and occupational status are fairly small. The results point out that health inequalities can partly be explained by different smoking habits and, therefore, underline the necessity of a differentiated and group-specific tobacco prevention and tobacco control policy.
Supplemental Material, sj-pdf-1-mns-10.1177_20592043211012396 - The Perception of Musical Expression in the Nineteenth Century: The Case of the Glorifying Hymnic*
Creators: name: Hentschel, Frank
name: Kreutz, Gunter
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 190406 Music Composition
subject: FOS: Arts (arts, history of arts, performing arts, music)
subject: 190407 Music Performance
subject: 190409 Musicology and Ethnomusicology

description: Supplemental Material, sj-pdf-1-mns-10.1177_20592043211012396 for The Perception of Musical Expression in the Nineteenth Century: The Case of the Glorifying Hymnic* by Frank Hentschel and Gunter Kreutz in Music & Science
Performance Evaluation of a Next-Generation SX-Aurora TSUBASA Vector Supercomputer
Creators: name: Takahashi, Keichi
name: Fujimoto, Soya
name: Nagase, Satoru
name: Isobe, Yoko
name: Shimomura, Yoichi
name: Egawa, Ryusuke
name: Takizawa, Hiroyuki
Publisher: name: arXiv
Year: 2023
Subjects: subject: Distributed, Parallel, and Cluster Computing (cs.DC)
subject: Performance (cs.PF)
subject: FOS: Computer and information sciences

description: Data movement is a key bottleneck in terms of both performance and energy efficiency in modern HPC systems. The NEC SX-series supercomputers have a long history of accelerating memory-intensive HPC applications by providing sufficient memory bandwidth to applications. In this paper, we analyze the performance of a prototype SX-Aurora TSUBASA supercomputer equipped with the brand-new Vector Engine (VE30) processor. VE30 is the first major update to the Vector Engine processor series, and offers significantly improved memory access performance due to its renewed memory subsystem. Moreover, it introduces new instructions and incorporates architectural advancements tailored for accelerating memory-intensive applications. Using standard benchmarks, we demonstrate that VE30 considerably outperforms other processors in both performance and efficiency of memory-intensive applications. We also evaluate VE30 using applications including SPEChpc, and show that VE30 can run real-world applications with high performance. Finally, we discuss performance tuning techniques to obtain maximum performance from VE30.
description: This paper has been accepted at ISC 2023
title: Muḥammad al-Amīn, at-Tuḥfa an-nādira
title: محمد الأمين، التحفة النادرة
title: Muḥammad al-Amīn, al-Tuḥfaẗ al-nādiraẗ
Creators: name: Al-Amīn, Muḥammad
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2025
Subjects: subject: Bibliographie
subject: Berbères
subject: Manuscrit berbère
subject: Manuscrit arabe
subject: Maroc

description: Contient al-Tuḥfaẗ al-nādiraẗ ilā al-ḥukūmaẗ al-ḥāḍiraẗ - التحفة النادرة إلى الحكومة الحاضرة. Sur le folio 2r : une bibliographie d’autres travaux du même auteur, écrits en anglais et en turc (les titres sont donnés en arabe).
description: Source: Fonds Arsène Roux (1893-1971) conservé au secteur Archives de la recherche de la Médiathèque de la Maison méditerranéenne des sciences de l’homme (MMSH - UAR3125, Aix-Marseille Université/CNRS)
description: Relation: https://calames.abes.fr/pub/ms/Calames-2020924229135481
description: Provenance: Le fonds Arsène Roux (1893-1971) a été créé en 1974 à la suite du legs de la bibliothèque personnelle et des documents d’Arsène Roux par son épouse Emma Roux et sa fille Francette Cismigiu à l’Encyclopédie berbère, sous la responsabilité de Gabriel Camps, directeur du Laboratoire d’anthropologie et de préhistoire des pays de la Méditerranée occidentale (LAPMO) à Aix-en-Provence. En 1995, Gabriel Camps en fait don à l’Institut de recherches sur le monde arabe et musulman (IREMAM - UMR3125, Aix-Marseille Université/CNRS). En 2004, le fonds Roux est déposé à la Médiathèque de la Maison méditerranéenne des sciences de l’homme (MMSH – UMR 7310, Aix-Marseille Université/CNRS), où il est conservé, valorisé et mis à disposition des chercheurs et des étudiants.
description: date: XXe siècle
On the temperature dependence of the density of states of liquids at low energies
Creators: name: Jin, Sha
name: Fan, Xue
name: Stamper, Caleb
name: Mole, Richard A.
name: Yu, Yuanxi
name: Hong, Liang
name: Yu, Dehong
name: Baggioli, Matteo
Publisher: name: arXiv
Year: 2023
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Materials Science (cond-mat.mtrl-sci)
subject: Other Condensed Matter (cond-mat.other)
subject: FOS: Physical sciences

description: We report neutron-scattering measurements of the density of states (DOS) of water and liquid Fomblin in a wide range of temperatures. In the liquid phase, we confirm the presence of a universal low-energy linear scaling of the experimental DOS as a function of the frequency, $g(ω)= a(T) ω$, which persists at all temperatures. The low-frequency scaling of the DOS exhibits a sharp jump at the melting point of water, below which the standard Debye's law, $g(ω) \propto ω^2$, is recovered. On the contrary, in Fomblin, we observe a continuous transition between the two exponents reflecting its glassy dynamics, which is confirmed by structure measurements. More importantly, in both systems, we find that the slope $a(T)$ grows with temperature following an exponential Arrhenius-like form, $a(T) \propto \exp(-\langle E \rangle /T)$. We confirm this experimental trend using molecular dynamics simulations and show that the prediction of instantaneous normal mode (INM) theory for $a(T)$ is in qualitative agreement with the experimental data.
description: v3: revised manuscript
sj-pdf-2-ccp-10.1177_13591045211009591 – Supplemental material for Identifying and managing eating disorders in type 1 diabetes mellitus: An all-Wales study
Creators: name: Tan, Jacinta O A
name: Spector-Hill, Imogen
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 111099 Nursing not elsewhere classified
subject: FOS: Health sciences
subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: 110319 Psychiatry (incl. Psychotherapy)
subject: FOS: Clinical medicine

description: Supplemental material, sj-pdf-2-ccp-10.1177_13591045211009591 for Identifying and managing eating disorders in type 1 diabetes mellitus: An all-Wales study by Jacinta O A Tan and Imogen Spector-Hill in Clinical Child Psychology and Psychiatry
Infektionen des Menschen durch enterohämorrhagische Escherichia coli (EHEC) in der Bundesrepublik Deutschland von 1998 bis 2001
Creators: name: Fruth, Angelika
name: Prager, Rita
name: Friedrich, Alexander W.
name: Kuczius, T.
name: Roggentin, Peter
name: Karch, Helge
name: Ammon, Andrea
name: Bockemühl, Jochen
name: Tschäpe, Helmut
Publisher: name: Robert Koch-Institut, Infektionskrankheiten / Erreger
Year: 2002
Subjects: subject: Inzidenz
subject: Diagnostik
subject: Enterohämorrhagische E. coli
subject: Virulenzspektrum
subject: Incidence
subject: Diagnostics
subject: Enterohemorrhagic E. coli
subject: Virulence pattern
subject: 610 Medizin

description: In der Bundesrepublik Deutschland weisen die intestinalen Infektionen mit enterohämorrhagischen Escherichia coli (EHEC) in den Jahren von 1998 bis 2001 eine außerordentlich große biologische Erregervielfalt auf. Es zeigt sich jedoch keine dramatische Zunahme ihrer klinischen und epidemiologischen Bedeutung. Während Infektionen mit dem Serovar O157:H7 weiter rückläufig sind, treten zunehmend andere EHEC-Erregergruppen wie O26:H11 und O1O3:H2 u.a. als Infektionsursachen auf. Diese große Erregervielfalt weist möglicherweise auf vielfältige Infektionsquellen und -wege hin. Da inzwischen weitere bakterielle Pathogenitätsfaktoren identifiziert wurden (besonders durch die Entschlüsselung des EHEC-Genoms), ist die Differenzierung von humanpathogenen und nicht humanpathogenen Stämmen weiterhin offen. Eine kontinuierliche Überwachung dieser Erregervielfalt und -dynamik, ihrer Ausbreitung und ihrer Infektionswege sowie -quellen bleibt eine wichtige Aufgabe des öffentlichen Gesundheitsdienstes (ÖGD).
description: Intestinal infections in Germany due to enterohemorrhagic E. coli bacteria (EHEC) between 1998 and 2001 reveal a large scale of biological diversity of their pathogens. However, no dramatic increase of their clinical importance and public health implications has been observed. As strains of serovar O157:H7 have continuously declined as causative agents, other serovars such as O26:H11 and O103:H2 have replaced them. The great diversity of the EHEC pathogens might point to a great number of various infection routes and sources. Since recently new pathogenic factors of EHEC bacteria have been detected (especially by the sequencing of the genome of EHEC), it is currently not possible to define a clear-cut difference between human pathogens and nonhuman pathogens. The enhanced surveillance of EHEC pathogens with respect to their biological diversity and dynamics, their epidemic spread, and their infection routes and sources remain an essential task of the public health authorities.