cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Experimental Test of Universality of the Anderson Transition
Creators: name: Lopez, Matthias
name: Clément, Jean-François
name: Szriftgiser, Pascal
name: Garreau, Jean Claude
name: Delande, Dominique
Publisher: name: arXiv
Year: 2011
Subjects: subject: Quantum Physics (quant-ph)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: We experimentally test the universality of the Anderson three dimensional metal-insulator transition. Nine sets of parameters controlling the microscopic details of this second order phase transition have been tested. The corresponding critical exponents are independent (within $2σ$) of these microscopic details, and the average value $1.63\pm0.05$ is in very good agreement with the numerically predicted value, $ν= 1.58$.
description: 4 pages, 3 figures, 1 table
An explicit bijection between semistandard tableaux and non-elliptic sl_3 webs
Creators: name: Russell, Heather M.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Combinatorics (math.CO)
subject: Geometric Topology (math.GT)
subject: Quantum Algebra (math.QA)
subject: FOS: Mathematics
subject: 05E10, 57M15, 81R50

description: The sl_3 spider is a diagrammatic category used to study the representation theory of the quantum group U_q(sl_3). The morphisms in this category are generated by a basis of non-elliptic webs. Khovanov- Kuperberg observed that non-elliptic webs are indexed by semistandard Young tableaux. They establish this bijection via a recursive growth algorithm. Recently, Tymoczko gave a simple version of this bijection in the case that the tableaux are standard and used it to study rotation and joins of webs. We build on Tymoczko's bijection to give a simple and explicit algorithm for constructing all non-elliptic sl_3 webs.
Groups whose geodesics are locally testable
Creators: name: Hermiller, S.
name: Holt, Derek F.
name: Rees, Sarah
Publisher: name: arXiv
Year: 2011
Subjects: subject: Group Theory (math.GR)
subject: FOS: Mathematics
subject: 20F65, 68Q45

description: A regular set of words is ($k$-)locally testable if membership of a word in the set is determined by the nature of its subwords of some bounded length $k$. In this article we study groups for which the set of all geodesic words with respect to some generating set is ($k$-)locally testable, and we call such groups ($k$-)locally testable. We show that a group is \klt{1} if and only if it is free abelian. We show that the class of ($k$-)locally testable groups is closed under taking finite direct products. We show also that a locally testable group has finitely many conjugacy classes of torsion elements. Our work involved computer investigations of specific groups, for which purpose we implemented an algorithm in \GAP\ to compute a finite state automaton with language equal to the set of all geodesics of a group (assuming that this language is regular), starting from a shortlex automatic structure. We provide a brief description of that algorithm.
Mitochondrial damage control: delineating the mechanisms of mitochondrial repair
Creators: name: UOSELIS, LOUISE MICHELE
Publisher: name: Monash University
Year: 2022
Subjects: classificationCode: 310199
subject: Biochemistry and cell biology not elsewhere classified
classificationCode: 310803
subject: Plant cell and molecular biology
classificationCode: 310902
subject: Animal cell and molecular biology

description: Mitochondrial function is essential for our health. The mitochondrial quality control machinery identifies and remedies dysfunctional mitochondria to protect the health of our mitochondrial network. The PINK1/Parkin pathway of the quality control machinery degrades severely damaged mitochondria, while the mitochondrial unfolded protein response (UPRmt) repairs mitochondria by increasing the production of mito-protective factors during proteostasis stress. While we have a detailed mechanistic understanding of PINK1/Parkin mitophagy, the UPRmt is not well understood in humans. The work in this thesis furthers our mechanistic understanding of the mammalian UPRmt and the signalling interplay between the UPRmt and PINK1/Parkin mitophagy.
Spectroscopic Follow-up of X-ray Sources in the ChaMPlane Survey: Identification of a New Cataclysmic Variable
Creators: name: Servillat, Mathieu
name: Grindlay, J.
name: Berg, M. van den
name: Hong, J.
name: Zhao, P.
name: Allen, B.
Publisher: name: arXiv
Year: 2011
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: We present a multi-object optical spectroscopy follow-up study of X-ray sources in a field along the Galactic Plane (l=327.42 deg, b=2.26 deg) which is part of the Chandra Multi-wavelength Plane survey (ChaMPlane). We obtained spectra for 46 stars, including 15 likely counterparts to X-ray sources, and sources showing an H-alpha color excess. This has led to the identification of a new cataclysmic variable (CV), CXOPS J154305.5-522709, also named ChaMPlane Bright Source 7 (CBS~7), and we identified 8 X-ray sources in the field as active late-type stars. CBS~7 was previously studied in X-rays and showed a hard spectrum and two periods: 1.22+/-0.08 h and 2.43+/-0.26 h. We present here clear evidence that the source is a CV through the detection of H, HeI and HeII emission lines in its optical spectrum. The hard X-ray spectrum and the presence of the HeII 4686 in emission with a large equivalent width suggest a magnetic CV. The near-infrared counterpart is significantly variable, and we found a period consistent with the longest X-ray period at 2.39+/-0.05 h but not the shortest X-ray period. If this period is the orbital period, this would place the system in the CV period gap. The possible orbital period suggests a dM4+/-1 companion star. The distance is then estimated to be ~1 kpc. The system could be a relatively hard and X-ray luminous polar or an intermediate polar, possibly nearly-synchronous.
description: accepted for publication in ApJ; 6 figures, 5 tables, 8 pages with emulateapj style
Characterization of The Functional Role of PEAK1 and PEAK3 Pseudokinases
Creators: name: HOU, JIANMEI
Publisher: name: Monash University
Year: 2022
Subjects: classificationCode: 310111
subject: Signal transduction
classificationCode: 321101
subject: Cancer cell biology
classificationCode: 310199
subject: Biochemistry and cell biology not elsewhere classified

description: The three pseudokinases PEAK1, PEAK2 and the recently identified PEAK3 constitute the PEAK family. Both PEAK1 and PEAK2 function as scaffolds to regulate cell proliferation, migration and invasion. PEAK3 is a novel pseudokinase, whose signalling pathways and function remain poorly characterized. In this thesis, the role of PEAK1 in mammary gland development and PEAK3 signalling mechanisms and function were characterized.
Targeting host factors in infections
Creators: name: JEON, YUSUN
Publisher: name: Monash University
Year: 2022
Subjects: classificationCode: 310799
subject: Microbiology not elsewhere classified
classificationCode: 310199
subject: Biochemistry and cell biology not elsewhere classified
classificationCode: 320499
subject: Immunology not elsewhere classified

description: Staphylococcus aureus is a human pathogen that causes a wide array of infections. Despite the strong epidemiological association of the pore-forming toxin, Panton-Valentine leukocidin (PVL) with S. aureus pathogenesis, the exact mechanism by which PVL kills host cells such as innate immune cells remains poorly understood. In this thesis, I have used a genome-wide CRISPR screen to identify host factors that promote PVL-mediated killing of macrophages. The screen identified the cell surface receptor C5aR1 which binds PVL, but also FBXO11 and HDAC5. The findings suggest that both, FBXO11 and HDAC5, regulate C5aR1 expression and thus susceptibility to PVL. This raises the potential to use existing compounds as therapeutics against S. aureus infections.
Dynamics of colloidal crystals studied by pump-probe experiments at FLASH
Creators: name: Dronyak, R.
name: Gulden, J.
name: Yefanov, O. M.
name: Singer, A.
name: Gorniak, T.
name: Senkbeil, T.
name: Meijer, J. -M.
name: Al-Shemmary, A.
name: Hallmann, J.
name: Mai, D. D.
name: Reusch, T.
name: Dzhigaev, D.
name: Kurta, R. P.
name: Lorenz, U.
name: Petukhov, A. V.
name: Duesterer, S.
name: Treusch, R.
name: Strikhanov, M. N.
name: Weckert, E.
name: Mancuso, A. P.
name: Salditt, T.
name: Rosenhahn, A.
name: Vartanyants, I. A.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: We present a time-resolved infrared (IR) pump and extreme-ultraviolet (XUV) probe diffraction experiment to investigate ultrafast structural dynamics in colloidal crystals with picosecond resolution. The experiment was performed at the FLASH facility at DESY with a fundamental wavelength of 8 nm. In our experiment, the temporal changes of Bragg peaks were analyzed and their frequency components were calculated using Fourier analysis. Periodic modulations in the colloidal crystal were localized at a frequency of about 4-5 GHz. Based on the Lamb theory, theoretical calculations of vibrations of the isotropic elastic polystyrene spheres of 400 nm in size reveal a 5.07 GHz eigenfrequency of the ground (breathing) mode.
description: 12 pages, 3 figures
D3.2 Framework providing definitions, review and operational typology of rural areas in Europe
Creators: name: Féret, Samuel
name: Berchoux, Tristan
name: Requier, Mélanie
name: Abdelhakim, Tahani
name: Slatmö, Elin
name: Chartier, Olivier
name: Nieto, Enrique
name: Miller, David
Publisher: name: Zenodo
Year: 2020

description: This deliverable aims at compiling the existing data, knowledge and policy framework on rural in the EU, so to provide an operational framework for SHERPA multi-actor platforms (MAPs) when they come at describing rural trends, challenges and opportunities in their respective areas. The definition of rural and rurality is a longstanding issue which has been the subject of debates in the scientific literature for a while. While endeavouring to define ‘rurality’, attempts have been made -and still continue- to understand rurality, leading to various typologies of areas based on different quantifiable criteria. In that respect, demography, employment, and accessibility are used as main criteria in statistical categories, which are then used to map the boundaries of the EU rural.
Vivo An Der Hochschule Hannover - Beispiel: Forschungsprojekte
Creators: name: Hauschke, Christian
Publisher: name: Zenodo
Year: 2015
Subjects: cris
fis
forschungsinformationen
vivo
hochschule hannover
forschungsprojekte

description: VIVO-Workshop vom 9.9.2015 an der TIB/UB Hannover

http://blogs.tib.eu/wp/vivo/
MELT - a Translated Domain Specific Language Embedded in the GCC Compiler
Creators: name: Starynkevitch, Basile
Publisher: name: arXiv
Year: 2011
Subjects: subject: Programming Languages (cs.PL)
subject: Software Engineering (cs.SE)
subject: FOS: Computer and information sciences
subject: D.3.4; D.1.1; D.2.4; D.3.2

description: The GCC free compiler is a very large software, compiling source in several languages for many targets on various systems. It can be extended by plugins, which may take advantage of its power to provide extra specific functionality (warnings, optimizations, source refactoring or navigation) by processing various GCC internal representations (Gimple, Tree, ...). Writing plugins in C is a complex and time-consuming task, but customizing GCC by using an existing scripting language inside is impractical. We describe MELT, a specific Lisp-like DSL which fits well into existing GCC technology and offers high-level features (functional, object or reflexive programming, pattern matching). MELT is translated to C fitted for GCC internals and provides various features to facilitate this. This work shows that even huge, legacy, software can be a posteriori extended by specifically tailored and translated high-level DSLs.
description: In Proceedings DSL 2011, arXiv:1109.0323
Defining intercellular communication between tumour cells and carcinoma-associated fibroblasts in prostate cancer
Creators: name: WU, YUNJIAN
Publisher: name: Monash University
Year: 2022
Subjects: classificationCode: 321101
subject: Cancer cell biology
classificationCode: 310199
subject: Biochemistry and cell biology not elsewhere classified
classificationCode: 310803
subject: Plant cell and molecular biology
classificationCode: 310902
subject: Animal cell and molecular biology

description: This study utilised novel proteomics approaches to identify signalling pathways involved in prostate cancer progression, and define relative contribution of proteins from cancer cells and the surrounding tumour microenvironment. Understanding this intercellular communication is essential to discover new biomarkers and therapeutic approaches to improve clinical management of prostate cancer patients.
Follow the Sulfur: Using Yeast Mutants to Study a Metabolic Pathway
Creators: name: O'Connor, Clare
Publisher: name: QUBES Educational Resources
Year: 2021

description:
Students are frequently overwhelmed by the complexity of metabolic pathways and they think they have "learned" the pathway when they have memorized the individual reactions.  This laboratory lesson helps students to understand the significance of individual reactions in the pathways leading to methionine synthesis in the budding yeast, Saccharomyces cerevisiae.  Students appreciate that methionine is one of only two sulfur-containing amino acids, and students do not find it difficult to follow the "yellow" sulfur atom in the pathway. In the lesson, students use three different yeast met strains, each of which lacks a single gene involved in methionine synthesis.  Working in groups of three, students identify the missing MET gene in each of the three deletion strains by analyzing the abilities of the deletion strains to grow on several defined media in which methionine has been replaced with alternative sulfur sources. Students also determine the position of mutant genes in the pathway relative to sulfite reductase, using indicator media that reacts with sulfide, the product of the reaction catalyzed by sulfite reductase. For the analysis, students prepare serial dilutions of yeast cultures and spot the dilution series on agar plates. This lesson is part of a semester-long research investigation into the evolutionary conservation of the genes involved in methionine synthesis. The lesson can also be used as a stand-alone exercise that teaches students about biochemical pathways, while reinforcing basic microbiological techniques.
Diffusion Mechanisms in Lithium Disilicate Melt by Molecular Dynamics Simulation
Creators: name: Gonçalves, Luis G. V.
name: Rino, José P.
Publisher: name: arXiv
Year: 2011
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: In this work we study the diffusion mechanisms in lithium disilicate melt using molecular dynamics simulation, which has an edge over other simulation methods because it can track down actual atomic rearrangements in materials once a realistic interaction potential is applied. Our simulation results of diffusion coefficients show an excellent agreement with experiments. We also demonstrate that our system obeys the famous Stokes-Einstein relation at least down to 1400 K, while a decoupling between relaxation and viscosity takes place at a higher temperature. Additionally, an analysis on the dynamical behavior of slow-diffusing atoms reveals explicitly the presence of dynamical heterogeneities.
description: 5 pages, 5 figures
A novel epigenetic modification regulating telomeric chromatin assembly
Creators: name: BENJAMIN, VINOD
Publisher: name: Monash University
Year: 2022
Subjects: classificationCode: 310199
subject: Biochemistry and cell biology not elsewhere classified
classificationCode: 310803
subject: Plant cell and molecular biology
classificationCode: 310902
subject: Animal cell and molecular biology

description: H3.3 is a histone H3 variant that is evolutionarily conserved between species. H3.3, found at both active and inactive regions of the chromatin, consists of a unique Serine residue at position 31 and, this residue may be modified. However, the function of the H3.3 Serine 31 modification has only been studied at active regions of the chromatin. Thus, this thesis investigates the function of this H3.3 Serine modification at inactive regions of the chromatin. Mutational studies of the Serine residue showed that the modification was important to regulate proteins from modifying inactive chromatin, providing new insights in inactive chromatin regulation.
The interplay of intrinsic and extrinsic bounded noises in genetic networks
Creators: name: Caravagna, Giulio
name: Mauri, Giancarlo
name: d'Onofrio, Alberto
Publisher: name: arXiv
Year: 2012
Subjects: subject: Molecular Networks (q-bio.MN)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Biological Physics (physics.bio-ph)
subject: Quantitative Methods (q-bio.QM)
subject: FOS: Biological sciences
subject: FOS: Physical sciences

description: After being considered as a nuisance to be filtered out, it became recently clear that biochemical noise plays a complex role, often fully functional, for a genetic network. The influence of intrinsic and extrinsic noises on genetic networks has intensively been investigated in last ten years, though contributions on the co-presence of both are sparse. Extrinsic noise is usually modeled as an unbounded white or colored gaussian stochastic process, even though realistic stochastic perturbations are clearly bounded. In this paper we consider Gillespie-like stochastic models of nonlinear networks, i.e. the intrinsic noise, where the model jump rates are affected by colored bounded extrinsic noises synthesized by a suitable biochemical state-dependent Langevin system. These systems are described by a master equation, and a simulation algorithm to analyze them is derived. This new modeling paradigm should enlarge the class of systems amenable at modeling. We investigated the influence of both amplitude and autocorrelation time of a extrinsic Sine-Wiener noise on: $(i)$ the Michaelis-Menten approximation of noisy enzymatic reactions, which we show to be applicable also in co-presence of both intrinsic and extrinsic noise, $(ii)$ a model of enzymatic futile cycle and $(iii)$ a genetic toggle switch. In $(ii)$ and $(iii)$ we show that the presence of a bounded extrinsic noise induces qualitative modifications in the probability densities of the involved chemicals, where new modes emerge, thus suggesting the possibile functional role of bounded noises.
Carl Justi: Velazquez y su siglo
Creators: name: Soehner, Halldor
Publisher: name: Kunstchronik. Monatsschrift für Kunstwissenschaft, Museumswesen und Denkmalpflege
Year: 2019

description: Rezension zu: Carl Justi: Velazquez y su siglo. Traducido del Alemán por Pedro Marrades. Revisión y Apéndice: Despues de Justi. Medio siglo de estudios velazquistas por Juan Antonio Gay a Nuno. Espasa-Calpe, S. A., Madrid, 1953. 917 S. und 256 Abb. 28 X 20 cm.
description: Kunstchronik. Monatsschrift für Kunstwissenschaft, Museumswesen und Denkmalpflege, Bd. 8 Nr. 3 (1955): Kunstchronik. Monatsschrift für Kunstwissenschaft, Museumswesen und Denkmalpflege
A DSEL for Studying and Explaining Causation
Creators: name: Walkingshaw, Eric
name: Erwig, Martin
Publisher: name: arXiv
Year: 2011
Subjects: subject: Programming Languages (cs.PL)
subject: FOS: Computer and information sciences

description: We present a domain-specific embedded language (DSEL) in Haskell that supports the philosophical study and practical explanation of causation. The language provides constructs for modeling situations comprised of events and functions for reliably determining the complex causal relationships that emerge between these events. It enables the creation of visual explanations of these causal relationships and a means to systematically generate alternative, related scenarios, along with corresponding outcomes and causes. The DSEL is based on neuron diagrams, a visual notation that is well established in practice and has been successfully employed for causation explanation and research. In addition to its immediate applicability by users of neuron diagrams, the DSEL is extensible, allowing causation experts to extend the notation to introduce special-purpose causation constructs. The DSEL also extends the notation of neuron diagrams to operate over non-boolean values, improving its expressiveness and offering new possibilities for causation research and its applications.
description: In Proceedings DSL 2011, arXiv:1109.0323
Regulation of humoral immune memory in acute versus chronic viral infection
Creators: name: COOPER, LUCY CAITLIN
Publisher: name: Monash University
Year: 2022
Subjects: classificationCode: 320404
subject: Cellular immunology
classificationCode: 320499
subject: Immunology not elsewhere classified

description: Effective immune memory provides long-lasting protection against repeated pathogen exposure and is a hallmark of successful vaccines. Yet, viral pathogens that are unable to be cleared from the body disrupt the immune system such that the host is unable to form effective immune memory cell populations, including memory B cells. This thesis identified various novel mechanisms by which chronic viral infection disrupts the formation and function of memory B cells. The results of this study may guide the development of effective vaccines and novel therapeutics for chronic viral infections.
Integrative Network Modelling to Advance Systems-level Understanding of Signalling Networks and Identify New Cancer Therapies
Creators: name: GHOMLAGHI, MILAD
Publisher: name: Monash University
Year: 2022
Subjects: classificationCode: 310299
subject: Bioinformatics and computational biology not elsewhere classified
classificationCode: 310199
subject: Biochemistry and cell biology not elsewhere classified

description: Cellular signalling pathways are responsible for receiving, integrating, and processing cellular cues to enact cellular responses. They are essential to the normal functioning of cells and their disruption leads to diseases. Mounting discoveries demonstrates these networks are highly complex and non-linear. A deep understanding of them, therefore, requires systems-based approaches that synergize computational modelling and experimental analyses. The PI3K and Hippo pathways are major signalling pathways that are dysregulated in cancer. The aim of this thesis is to gain a systems-level understanding of these pathways, and their crosstalk using a systems-based approach; and utilise that knowledge to design new therapies.
Generalised Elliptic Functions
Creators: name: England, Matthew
name: Athorne, Chris
Publisher: name: arXiv
Year: 2011
Subjects: subject: Mathematical Physics (math-ph)
subject: Algebraic Geometry (math.AG)
subject: Representation Theory (math.RT)
subject: FOS: Physical sciences
subject: FOS: Mathematics
subject: 14H55, 14K25, 14H40, 14H70

description: We consider multiply periodic functions, sometimes called Abelian functions, defined with respect to the period matrices associated with classes of algebraic curves. We realise them as generalisations of the Weierstras P-function using two different approaches. These functions arise naturally as solutions to some of the important equations of mathematical physics and their differential equations, addition formulae, and applications have all been recent topics of study. The first approach discussed sees the functions defined as logarithmic derivatives of the sigma-function, a modified Riemann theta-function. We can make use of known properties of the sigma function to derive power series expansions and in turn the properties mentioned above. This approach has been extended to a wide range of non hyperelliptic and higher genus curves and an overview of recent results is given. The second approach defines the functions algebraically, after first modifying the curve into its equivariant form. This approach allows the use of representation theory to derive a range of results at lower computational cost. We discuss the development of this theory for hyperelliptic curves and how it may be extended in the future.
description: 16 pages
Georg Scheja, Der Isenheimer Altar des Matthias Grünewald (Mathis Gothart Nithart)
Creators: name: Vetter, Ewald Maria
Publisher: name: Kunstchronik. Monatsschrift für Kunstwissenschaft, Museumswesen und Denkmalpflege
Year: 2020

description: Rezension zu: Georg Scheja, Der Isenheimer Altar des Matthias Grünewald (Mathis Gothart Nithart). Aufnahmen von Bert Koch. Köln, Verlag M. DuMont Schauberg, 1969. 80 Seiten, 38 Abb. und 16 Farbtafeln. DM 34. - .
description: Kunstchronik. Monatsschrift für Kunstwissenschaft, Museumswesen und Denkmalpflege, Bd. 23 Nr. 5 (1970): Kunstchronik. Monatsschrift für Kunstwissenschaft, Museumswesen und Denkmalpflege
Gerard ter Borch
Creators: name: Gerson, Horst
Publisher: name: Kunstchronik. Monatsschrift für Kunstwissenschaft, Museumswesen und Denkmalpflege
Year: 2020

description: Kunstchronik. Monatsschrift für Kunstwissenschaft, Museumswesen und Denkmalpflege, Bd. 27 Nr. 11 (1974): Kunstchronik. Monatsschrift für Kunstwissenschaft, Museumswesen und Denkmalpflege
Herbert Brunner †
Creators: name: Fischer, Manfred Frithjof
Publisher: name: Kunstchronik. Monatsschrift für Kunstwissenschaft, Museumswesen und Denkmalpflege
Year: 2020

description: Kunstchronik. Monatsschrift für Kunstwissenschaft, Museumswesen und Denkmalpflege, Bd. 27 Nr. 12 (1974): Kunstchronik. Monatsschrift für Kunstwissenschaft, Museumswesen und Denkmalpflege
A note on the direct limit of increasing sequences of completely decomposable modules over integral domains
Creators: name: Macías-Díaz, J. E.
Publisher: name: arXiv
Year: 2011
Subjects: subject: Commutative Algebra (math.AC)
subject: Group Theory (math.GR)
subject: FOS: Mathematics
subject: 13C10, 13C05, 13F05, 16D40

description: In this note, we establish conditions under which the union of an increasing sequence of completely decomposable modules over domains are again completely decomposable. In our investigation, the condition of purity of modules is crucial. In fact, the main result reported in this work states that a module is completely decomposable when it is the union of a countable, ascending chain of completely decomposable, pure submodules, providing thus a generalization of Hill's criterion of freeness from abelian group theory.
Secesja w Zakopanem?
Creators: name: Chrudzimska-Uhera, Katarzyna
Publisher: name: Pamiętnik Sztuk Pięknych / Fine Arts Diary
Year: 2019

description: Pamiętnik Sztuk Pięknych / Fine Arts Diary, Bd. 10 (2015): Pamiętnik Sztuk Pięknych / Fine Arts Diary
D4.1 Framework for identification, selection and evaluation of past and ongoing research projects
Creators: name: Panoutsopoulos, Hercules
name: Espejo Garcia, Borja
name: Fountas, Spyros
Publisher: name: Zenodo
Year: 2020

description: Capitalising upon existing knowledge requires the employment of a sound methodological approach able to ensure a systematically exploitation of available research. Within this context, the aim of the present document is to provide a detailed presentation of the SHERPA methodology for taking stock of past and ongoing findings of rural-related research. The SHERPA methodology consists of a total number of four phases with each of these phases comprising a number of appropriately designed steps. Research in the context of SHERPA involves a balanced combination of human labour and technology-supported, automated tasks. As a result, there is potential to take advantage of the experience of domain experts and, at the same time, exploit the power of cutting-edge technologies.
Decomposition of orthogonal matrix and synthesis of two-qubit and three-qubit orthogonal gates
Creators: name: Wei, Hai-Rui
name: Di, Yao-Min
Publisher: name: arXiv
Year: 2012
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The decomposition of matrices associated to two-qubit and three-qubit orthogonal gates is studied, and based on the decomposition the synthesis of these gates is investigated. The optimal synthesis of general two-qubit orthogonal gate is obtained. For two-qubit unimodular orthogonal gate, it requires at most 2 CNOT gates and 6 one-qubit Ry gates. For the general three-qubit unimodular orthogonal gate, it can be synthesized by 16 CNOT gates and 36 one-qubit Ry and Rz gates in the worst case.
description: 7 pages,5 figures
An investigation into the mechanisms and function of alternative polyadenylation in S. cerevisiae
Creators: name: TURNER, RACHAEL EMILY
Publisher: name: Monash University
Year: 2022
Subjects: classificationCode: 310199
subject: Biochemistry and cell biology not elsewhere classified

description: mRNA is the intermediary molecule between proteins and the DNA that encodes them. The 3′ untranslated region of the mRNA is involved in regulating its function and can affect the stability and localisation of the mRNA within the cell as well as how much protein is produced. In this study we show that the length of the 3’ untranslated region in yeast cells can be increased through mutation of the 3’ end processing proteins or treatment with the anti-cancer drug cordycepin, which we show increases the speed at which mRNA are produced.
Systematic characterisation of network structures underlying adaptive resistance and susceptibility to sequential combination treatment in cancer
Creators: name: Rios, Karina Islas
Publisher: name: Monash University
Year: 2021
Subjects: classificationCode: 490102
subject: Biological mathematics
classificationCode: 310299
subject: Bioinformatics and computational biology not elsewhere classified

description: Targeted drugs, such as kinase inhibitors, has revolutionised cancer treatment. However, resistance to these drugs as monotherapies remains a major problem that prevents their full clinical impact. This thesis characterises in an unbiased and systematic manner, the network structures that underlie adaptive drug resistance against single-agent therapy and those that are susceptible to sequential combination therapy. Furthermore, this thesis develops a novel web-based app termed NetScan, which provides an unprecedented ability to ‘scan’, identify and visualise signalling networks with defined topological structure in real human signallome.
Quantum Excitations in Quantum Spin Ice
Creators: name: Ross, Kate A.
name: Savary, Lucile
name: Gaulin, Bruce D.
name: Balents, Leon
Publisher: name: arXiv
Year: 2011
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: Recent work has highlighted remarkable effects of classical thermal fluctuations in the dipolar spin ice compounds, such as "artificial magnetostatics", manifesting as Coulombic power-law spin correlations and particles behaving as diffusive "magnetic monopoles". In this paper, we address quantum spin ice, giving a unifying framework for the study of magnetism of a large class of magnetic compounds with the pyrochlore structure, and in particular discuss Yb2Ti2O7 and extract its full set of Hamiltonian parameters from high field inelastic neutron scattering experiments. We show that fluctuations in Yb2Ti2O7 are strong, and that the Hamiltonian may support a Coulombic "Quantum Spin Liquid" ground state in low field and host an unusual quantum critical point at larger fields. This appears consistent with puzzling features in prior experiments on Yb2Ti2O7. Thus Yb2Ti2O7 is the first quantum spin liquid candidate in which the Hamiltonian is quantitatively known.
description: 16 pages, 3 figures, 14 Supplementary Information pages, 3 supplementary figures
Formes modulaires modulo 2 : structure de l'algèbre de Hecke
Creators: name: Nicolas, Jean-Louis
name: Serre, Jean-Pierre
Publisher: name: arXiv
Year: 2012
Subjects: subject: Number Theory (math.NT)
subject: FOS: Mathematics
subject: 11F33, 11F25

description: Modular forms mod 2 : structure of the Hecke ring We show that the Hecke algebra for modular forms mod 2 of level 1 is isomorphic to the power series ring F2[[x, y]], where x = T3 and y = T5.
description: http://dx.doi.org/10.1016/j.crma.2012.03.019
Phase appearance or disappearance in two-phase flows
Creators: name: Cordier, Floraine
name: Degond, Pierre
name: Kumbaro, Anela
Publisher: name: arXiv
Year: 2011
Subjects: subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: This paper is devoted to the treatment of specific numerical problems which appear when phase appearance or disappearance occurs in models of two-phase flows. Such models have crucial importance in many industrial areas such as nuclear power plant safety studies. In this paper, two outstanding problems are identified: first, the loss of hyperbolicity of the system when a phase appears or disappears and second, the lack of positivity of standard shock capturing schemes such as the Roe scheme. After an asymptotic study of the model, this paper proposes accurate and robust numerical methods adapted to the simulation of phase appearance or disappearance. Polynomial solvers are developed to avoid the use of eigenvectors which are needed in usual shock capturing schemes, and a method based on an adaptive numerical diffusion is designed to treat the positivity problems. An alternate method, based on the use of the hyperbolic tangent function instead of a polynomial, is also considered. Numerical results are presented which demonstrate the efficiency of the proposed solutions.
Selenium Transfer between Kaolinite or Goethite Surfaces, Nutrient Solution and Oryza Sativa
Creators: name: Nothstein, Alexandra Kelly
Publisher: name: Karlsruhe
Year: 2015
Subjects: Selenium
Adsorption
Rice
Kaolinite
Goethite

description: The aim of this study was to describe and quantify Se transfer at the interface between soil and plant. For this purpose, three Se reservoirs were defined: soil, soil solution and plant, represented by kaolinite or goethite, nutrient solution and rice.
First, Se transfer from solution to plant and Se partitioning in the plant was studied; then adsorption-desorption processes of Se onto kaolinite and goethite were investigated.
Finally, a mass balance of the combined experiment was modelled.
title: Food matters: Translating information on what people eat, say they eat, into advice for health
Creators: name: Lara Gallegos, Jose J.
Publisher: name: University of Glasgow
Year: 2005
Subjects: subject: Nutrition.

description: The present dissertation deals with broad issues of scientific importance to the field of Dietetics and Human Nutrition, crossing the frontiers which lie between what people say they eat, what they actually eat, what they should eat, and the ultimate effects of diet composition on health, which must be translated into advice and guidelines. Firstly it addresses veracity. Dietary mis-reporting and its relation with psychological and eating behaviour variables were assessed in adult women of varied BMI. A questionnaire, comprising several well-established psychological and eating behaviour tests and two questions to assess inclination to mis-report, was compiled and validated for understandability. The eating habits and dietary practices of subjects involved in food related occupations were then assessed. The fact that these food skilled groups are potentially influential in other people's food choice, including that of their own families, invited the hypothesis that these groups may have healthier diets than other occupational groups. The third study was therefore designed to assess the effects of salmon consumption on vascular parameters of the metabolic syndrome. The opportunity was used to study the effect of salmon on serum leptin as well, following a report of lower leptin concentrations amongst fish-eaters, suggesting increased leptin sensitivity.
title: The role of followership in leadership
title: An empirical investigation of the nature and impact of followers and their following in organizations
titleType: AlternativeTitle
Creators: name: Ribbat, Mirko
Publisher: name: TU Dortmund
Year: 2024
Subjects: subject: Followership
subject: Führung
subject: Organisation
subject: Arbeit
subject: 150
subject: Führung
subject: Arbeit
subject: Organisation

description: Bisher konzentrierte sich die Führungsforschung auf die Führungskraft und ihren Einfluss auf die Mitarbeitenden und die Organisation. Obwohl der aktive Beitrag von Geführten (d.h. den Followern) als bedeutender Teil von Führung wiederholt hervorgehoben wurde, sind wichtige Fragen bisher noch nicht empirisch überprüft worden. Diese Dissertation konzentrierte sich deshalb auf die Rolle der Follower im Führungskontext. Mit einer empirischen Untersuchung der Natur und des Einflusses von Followern und ihrem Verhalten (d.h. Followership) in Organisationen wurden drei Studien durchgeführt, um sieben Forschungsfragen zu beantworten. Im Zentrum standen dabei zwei der einflussreichsten Followership-Konzepte (d.h. Kelleys [1992] Followership-Stile und die Formale Theorie von Followership von Uhl-Bien et al. [2014]; FTF). Zusammenfassend lässt sich feststellen, dass diese Dissertation neue Erkenntnisse über die Rolle von Followership in Führungsprozessen bietet. Sie liefert empirische Belege für prävalente theoretische Annahmen, die bisher noch nicht getestet wurden, sie entwickelt die Followership-Theorie weiter (Kelley, 1992; Uhl-Bien et al., 2014; Uhl-Bien & Carsten, 2018) und sie zeigt vielversprechende Wege für die zukünftige Followership-Forschung auf.
D4.2 SHERPA online repository design and technical specifications
Creators: name: Panoutsopoulos, Hercules
name: Espejo Garcia, Borja
name: Chartier, Olivier
name: Fountas, Spyros
Publisher: name: Zenodo
Year: 2020

description: The SHERPA online repository system is a core part of the technological infrastructure that will be developed and delivered in SHERPA. The aim of the system is to provide storage capacities for the data that is going to be produced and made available in the context of the SHERPA methodology for identification, selection and evaluation of past and ongoing research projects, as well as facilitate access to this data by stakeholders or any interested party.
Regulation of type 2 immune responses by innate and adaptive immune cells
Creators: name: Zaini, Aidil
Publisher: name: Monash University
Year: 2021
Subjects: classificationCode: 320211
subject: Infectious diseases
classificationCode: 320404
subject: Cellular immunology
classificationCode: 320499
subject: Immunology not elsewhere classified

description: Type 2 immunity is a cornerstone of effective responses against parasites. However, a dysregulated type 2 immune response causes allergy and asthma. Although T helper 2 cells are the key to type 2 immunity, my PhD thesis has expanded this dogma that group innate lymphoid cell 2 (ILC2) and T follicular helper cell (Tfh) are two important players in the regulation of type 2 immune responses. Particularly, a protein c-Rel regulates ILC2-dependent allergic responses, while Tfh cell responses that are highly heterogenous mediate effective responses against parasitic worms, paving the way for new therapeutic strategies for allergy and worm infections.
Tutorial on Online Partial Evaluation
Creators: name: Cook, William R.
name: Lämmel, Ralf
Publisher: name: arXiv
Year: 2011
Subjects: subject: Programming Languages (cs.PL)
subject: FOS: Computer and information sciences

description: This paper is a short tutorial introduction to online partial evaluation. We show how to write a simple online partial evaluator for a simple, pure, first-order, functional programming language. In particular, we show that the partial evaluator can be derived as a variation on a compositionally defined interpreter. We demonstrate the use of the resulting partial evaluator for program optimization in the context of model-driven development.
description: In Proceedings DSL 2011, arXiv:1109.0323
Arctic fire aerosols simulated by a modified version of the ECHAM-HAM global model
Creators: name: Zhong, Qirui
Publisher: name: Zenodo
Year: 2024

description: This file contains modeling outputs generated using a modified version of the global aerosol-climate model ECHAM6.3-HAM2.3. The simulations focus on aerosols originating from biomass burning over the boreal region (>55°N) and cover both the current period (2000–2021) and future projections. The data provide annual summer (June–August) seasonal averages for each year within these periods. The future scenario simulations assume a global warming level of 1°C above present-day temperatures, which results in higher biomass burning emissions in the boreal region. These future simulations are driven by projected biomass burning emissions that remain constant, with meteorological fields nudged to the 2000-2020 period to account for the impacts of transport conditions.

The following aerosol-related variables are provided:

od550er: Aerosol optical depth at a wavelength of 550 nmabs550aer: Absorption aerosol optical depth at 550 nmERE: Effective radiative effect (all-sky condition) at the top of the atmosphere (TOA)ARI: Radiative effect due to aerosol-radiation interactionACI: Radiative effect due to aerosol-cloud interaction

For further information or inquiries, please contact Dr. Qirui Zhong at qrzhong@pku.edu.cn.
Native defects in hybrid C/BN nanostructures
Creators: name: Pruneda, J. M.
Publisher: name: arXiv
Year: 2011
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: First-principles calculations of substitutional defects and vacancies are performed for zigzag-edged hybrid C/BN nanosheets and nanotubes which recently have been proposed to exhibit half-metallic properties. The formation energies show that defects form preferentially at the interfaces between graphene and BN domains rather than in the middle of these domains, and that substitutional defects dominate over vacancies. Chemical control can be used to favor localization of defects at C- B interfaces (nitrogen-rich environment) or C-N interfaces (nitrogen-poor environment). Although large defect concentrations have been considered here (106 cm-1), half-metallic properties can subsist when defects are localized at the C-B interface and for negatively charged defects localized at the C- N interface, hence the promising magnetic properties theoretically predicted for these zigzag-edged nanointerfaces might not be destroyed by point defects if these are conveniently engineered during synthesis.
description: 6 pages, 5 figures
A Biochemical and Structural Investigation into the γδ T Cell Receptor
Creators: name: RICE, MICHAEL THOMAS
Publisher: name: Monash University
Year: 2021
Subjects: classificationCode: 310199
subject: Biochemistry and cell biology not elsewhere classified
classificationCode: 310112
subject: Structural biology (incl. macromolecular modelling)
classificationCode: 320499
subject: Immunology not elsewhere classified
classificationCode: 310803
subject: Plant cell and molecular biology
classificationCode: 310902
subject: Animal cell and molecular biology

description: The human immune system plays a crucial role in health, safeguarding against disease and infection. Central to this protection is the ability of immune cells to distinguish ‘healthy’ and ‘diseased’ cells. However, our understanding of the mechanisms underpinning such recognition is incomplete. My Thesis sought to understand how a class of T cells (γδ T cells) recognise potential infection. Using high-resolution imaging we revealed the molecular mechanisms T cells use to recognise bacterial infection. Complementary work informed how these molecular recognition events may lead to an immune response. These discoveries could pave the way for immunotherapeutic development of such T cells.
Modeling of gyrosynchrotron radio emission pulsations produced by MHD loop oscillations in solar flares
Creators: name: Mossessian, George
name: Fleishman, Gregory D.
Publisher: name: arXiv
Year: 2011
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: A quantitative study of the observable radio signatures of the sausage, kink, and torsional MHD oscillation modes in flaring coronal loops is performed. Considering first non-zero order effect of these various MHD oscillation modes on the radio source parameters such as magnetic field, line of sight, plasma density and temperature, electron distribution function, and the source dimensions, we compute time dependent radio emission (spectra and light curves). The radio light curves (of both flux density and degree of polarization) at all considered radio frequencies are than quantified in both time domain (via computation of the full modulation amplitude as a function of frequency) and in Fourier domain (oscillation spectra, phases, and partial modulation amplitude) to form the signatures specific to a particular oscillation mode and/or source parameter regime. We found that the parameter regime and the involved MHD mode can indeed be distinguished using the quantitative measures derived in the modeling. We apply the developed approach to analyze radio burst recorded by Owens Valley Solar Array and report possible detection of the sausage mode oscillation in one (partly occulted) flare and kink or torsional oscillations in another flare.
description: ApJ, accepted
D4.3 First rural research outcomes retrieval using SHERPA web crawling tool
Creators: name: Espejo Garcia, Borja
name: Panoutsopoulos, Hercules
name: Mouseti, Sofia
name: Chartier, Olivier
Publisher: name: Zenodo
Year: 2020

description: The work presented in this deliverable relates to the iterative development and deployment of a web crawling tool for harvesting project-related data from project programme databases such as CORDIS and LIFE. This work constitutes the instantiation of the ‘Search-Retrieve-Pool’ phase of the SHERPA methodology that has been documented in Deliverable 4.1. The design and development of the crawling application are inextricably linked to the need of collecting specific pieces of information with regards to rural-related projects (also relating to a specific rural sub-topic) as instructed by the SHERPA data model, presented in Deliverable 4.2, and the set of metadata properties proposed for the projects to be stored in the SHERPA repository.
Regulation of the nucleic acid binding of PRC2 by the Polycomblike proteins
Creators: name: OWEN, BRADY MARIE
Publisher: name: Monash University
Year: 2021
Subjects: classificationCode: 310199
subject: Biochemistry and cell biology not elsewhere classified
classificationCode: 310504
subject: Epigenetics (incl. genome methylation and epigenomics)
classificationCode: 310803
subject: Plant cell and molecular biology
classificationCode: 310902
subject: Animal cell and molecular biology

description: Every cell in the body contains the exact same DNA but each cell only uses a proportion of the genes depending on its function. In adults, PRC2 is a molecule which switches off many genes that are only required during embryonic development. Incorrect control of which genes are turned off by PRC2 can lead to cancer. My thesis investigated how PRC2 is targeted to certain genes by its partner protein PHF19. PHF19 causes PRC2 to bind tightly to DNA. This does not depend on the DNA sequence but may depend on the 3D organisation of the DNA in the cell.
Understanding the role of Candida albicans Rpn4 in proteasome assembly and its link to cell membrane stress
Creators: name: Yau, Ka Pui Sharon
Publisher: name: Monash University
Year: 2021
Subjects: classificationCode: 310199
subject: Biochemistry and cell biology not elsewhere classified
classificationCode: 310803
subject: Plant cell and molecular biology
classificationCode: 310902
subject: Animal cell and molecular biology

description: Candida albicans is a highly adaptable human fungal pathogen that can cause superficial to serious infections. Incidences of antifungal resistance are increasing and pose a major concern to our healthcare system. This thesis examines the molecular components and pathways which enables Candida albicans to develop resistance and tolerance following exposure to antifungals.