cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Age-varying Associations of Depressive Symptoms and Heavy Episodic Drinking Throughout Adulthood Among People with HIV and Receiving care in Cameroon Within a National “treat all” Policy
Creators: name: Adedimeji, A.
name: Anastos, K.
name: Yone-Pefura, E.W.
name: Lancaster, K.E.
name: Yotebieng, M.
name: Nash, D.
name: Parcesepe, A.M.
name: Remch, M.
name: Ajeh, R.
name: Edmonds, A.
name: Dzudie, A.
name: Nsame, D.
Publisher: name: Springer
Year: 2022

description: Comorbid depression and heavy episodic drinking (HED) may threaten the success of “treat all” policies in sub-Saharan Africa as the population of people with HIV (PWH) ages. We investigated associations between depressive symptoms and heavy episodic drinking (HED) and the extent the relationship differed across ages among PWH receiving HIV care in Cameroon. We conducted a retrospective analysis of 18-60-year-old PWH on antiretroviral therapy in Cameroon from January 2016 to March 2020. Age-varying effect modelling was conducted to assess associations between depressive symptoms and HED across ages and by gender. Prevalence of depression and HED was highest at ages 20 and 25, respectively. After age 25, the magnitude of the association between depressive symptoms and HED was significant and increased until age 30 (aOR: 1.88, 95% CI: 1.48, 2.39), with associations remaining significant until age 55 (aOR: 1.64, 95% CI: 1.17, 2.29). Women had more variability and higher magnitudes of associations between depressive symptoms and HED than men. The interrelationship between depressive symptoms and HED was significant throughout most of adulthood for PWH receiving HIV care in Cameroon. Understanding age and gender trends in these associations can guide integration efforts in HIV care settings.
title: Humboldt Bay Municipal Water District annual maintenance activities
titleType: AlternativeTitle
title: Endangered Species Act Section 7(a)(2) Biological Opinion and Magnuson–Stevens Fishery Conservation and Management Act Essential Fish Habitat Response for the Humboldt Bay Municipal Water District’s Maintenance in the Mad River in Humboldt and Trinity Counties, California (SPN-2003-286620)
Creators: name: United States. National Marine Fisheries Service. West Coast Region
Publisher: name: United States. National Marine Fisheries Service. West Coast Region
Year: 2022

description: WCRO-2022-01004
Additional file 2: of Small RNA discovery in the interaction between barley and the powdery mildew pathogen
Creators: name: Hunt, Matt
name: Sagnik Banerjee
name: Surana, Priyanka
name: Meiling Liu
name: Fuerst, Greg
name: Mathioni, Sandra
name: Meyers, Blake
name: Nettleton, Dan
name: Wise, Roger
Publisher: name: Figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology

description: Figure S2. PhasiRNA size distributions for genotype-specific phasing. (PDF 382 kb)
title: OGS GLIDER DATA QUALITY CONTROL
Creators: name: R. Gerin
Publisher: name: OGS (Istituto Nazionale di Oceanografia e di Geofisica Sperimentale), Division of Oceanography
Year: 2021
Subjects: subject: Beach Litter data

description: This document describes the processing and quality control procedure for SeaGliders (SG554 and SG661) and Slocum gliders (unit 402 and unit 403) data files.
title: Kurze Videobeiträge zur thüringischen Flurnamenforschung
Creators: name: :None
Publisher: name: Thüringer Universitäts- und Landesbibliothek Jena
Year: 2021
Subjects: subject: 430
subject: 943

description: Thüringer Flurnamenportal: Flurnamen als Brücke zwischen Gesellschaft und Wissenschaft ; Online-Tagung
Global weak solutions for Kolmogorov-Vicsek type equations with orientational interactions
Creators: name: Gamba, Irene M.
name: Kang, Moon-Jin
Publisher: name: arXiv
Year: 2015
Subjects: subject: Analysis of PDEs (math.AP)
subject: FOS: Mathematics

description: We study the global existence and uniqueness of weak solutions to kinetic Kolmogorov-Vicsek models that can be considered a non-local non-linear Fokker-Planck type equation describing the dynamics of individuals with orientational interactions. This model is derived from the discrete Couzin-Vicsek algorithm as mean-field limit \cite{B-C-C,D-M}, which governs the interactions of stochastic agents moving with a velocity of constant magnitude, i.e. the the corresponding velocity space for these type of Kolmogorov-Vicsek models are the unit sphere. Our analysis for $L^p$ estimates and compactness properties take advantage of the orientational interaction property meaning that the velocity space is a compact manifold.
fo'o ds loZJs"B LdkmV dqekj u`isUnzukFk 'kkgnso % O;fDrRo ,oa ÑfrRo
Creators: name: Iadt Dqekj
Publisher: name: Zenodo
Year: 2022

description: >kj[k.M dh /kjrh us ,d ls c<+dj ,d egkiq#"kksa dks tUe fn;k gSA ;gk¡ ds fuoklh izÑfr izseh jgs gSa] mlls dgha c<+dj Lora=rk ds fnokus Hkh] ;gk¡ ds lqe/kqj ck¡lqjh] ekanj vkSj uxkM+ksa ds Lojksa ds lkFk xhr&u`R; esa jaxs jgrs gSa] rks ogha viuh ekr`Hkwfe dh j{kk ds fy, ouksa ds jktk 'ksj dh Hkkafr ngkM+ ekjdj 'k=qvksa dh Nkrh esa rhj cs/kus dks Hkh rRij jgrs gSaA fiNM+k dgk tkus okyk ;g >kj[k.M viuh vktknh ds fy, lnSo tkx#d jgk gSA ;gk¡ dh /kjrh esa izkÑfrd lainkvksa dk cgqewY; HkaMkj gS] ;gk¡ ds fuoklh Lora=rk izseh FksA >kj[k.M dh ;g riksHkwfe ouokfl;ksa dh fof'k"V lkaLÑfrd thou&n'kZu dks iYyfor ,oa iq"ifir fd;k gSA muds thou esa dyk dk fof'k"V LFkku gSA >kj[k.M dh fofo/k tutkfr;k¡ gh ;gk¡ dh vkfn fuoklh gSA ouokfl;ksa dk dyk izse buds iwoZtksa dh nsu gSA tgk¡ ,d vksj ou] lqjE; ioZrksa] ufn;ksa] [kfut lEinkvksa ls ifjiw.kZ gS] rks nwljh vksj Hkwfe izkÑfrd oSHko] lgtrk] lknxh ls lEiUu gSA bl Hkwfe dh fofo/krk us yksxksa dks ,d rjg lkglh vkSj etcwr cuk fn;k] rks nwljh rjQ bu yksxksa dks LFkkf;Ro iznku djus esa dfBukbZ Hkh mRiUu dh gSA1 ;gk¡ ds fuokfl;ksa us vius LokfHkeku] dyk] oSHko] lgtrk] lknxh ls leLr lalkj dks ifjp; djk;k gS] pkgs oks dyk dk {ks= gks] ;q) dk {ks= gks] usr`Ro dk {ks= gks ;k [ksy dk {ks= gksA ges'kk vius deZ ls bl deZHkwfe dks xkSjokfUor fd;k gSA muds }kjk fd, x, dk;ksZa ls >kj[k.M ds izfrHkk dk lEeku Hkkjr ds lkFk&lkFk iwjs fo'o esa LFkkfir gqvk gSA >kj[k.M dh bl jRuxHkkZ /kjrh ls dbZ ukeh&fxjkeh f[kykM+h iSnk gq, gSaA muesa t;iky flag] lqejk; VsVs] euksgj Vksiuks] flYokuql MaqxMqax vkSj egsUnz flag /kkSuh tSls f[kykM+h jk"Vªh; iVy ij Nk x, gSaA dbZ foHkwfr;ksa us rks jk"Vªh; ds lkFk&lkFk vUrjkZ"Vªh; txr esa Hkh >kj[k.M dk uke jkS'ku fd;k gSA bu lHkh f[kykfM+;ksa ds dhfrZ rFkk muds ;ksxnkuksa dks dHkh Hkqyk;k ugha tk ldrk gSA exj Hkkjr ds ,d egku LdkmV dqekj u`isUnzukFk 'kkgnso dk uke u rks Hkkjr ds bfrgkl esa vkSj u gh >kj[k.M ds bfrgkl esa ns[kus dks feyrk gSA izLrqr 'kks/k i= esa dqekj u`isUnzukFk 'kkgnso ds O;fDrRo ,oa ÑfrRo ds rFkk buls tqM+s ,sfrgkfld rFkk vk/kqfud i{kksa dks js[kkafdr fd;k x;k gSA ftlls >kj[k.M rFkk Hkkjr ds yksx dqekj u`isUnzukFk 'kkgnso ds Hkkjr ds fy, muds }kjk fn, x, ;ksxnkuksa ls voxr gks ldsA
Additional file 3 of No evidence for sylvatic cycles of chikungunya, dengue and Zika viruses in African green monkeys (Chlorocebus aethiops sabaeus) on St. Kitts, West Indies
Creators: name: Valentine, Matthew John
name: Ciraola, Brenda
name: Aliota, Matthew Thomas
name: Vandenplas, Michel
name: Marchi, Silvia
name: Tenebray, Bernard
name: Leparc-Goffart, Isabelle
name: Gallagher, Christa Ann
name: Beierschmitt, Amy
name: Corey, Tatiana
name: Dore, Kerry McAuliffe
name: Lamballerie, Xavier De
name: Chengming Wang
name: Murdock, Courtney Cuin
name: Kelly, Patrick John
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Biotechnology
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Hematology
subject: 110309 Infectious Diseases
subject: Plant Biology
subject: 60506 Virology
subject: Computational Biology

description: Additional file 3: Table S1. Counts of mosquito species per month on St Kitts from November 2017 to March 2019 with the wet season highlighted in grey (May-November).
MOESM2 of Heterologous overexpression, purification and functional analysis of plant cellulose synthase from green bamboo
Creators: name: Hsuan-Yu Huang
name: Cheng, Yi-Sheng
Publisher: name: Figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology

description: Additional file 2:Â Figure S2. Protein purification results in low salt/non-reducing agent condition.
title: FEMA County of Harrison Jim Simpson Pier
titleType: AlternativeTitle
title: Endangered Species Act - Section 7 Consultation Biological Opinion Harrison County, Jim Simpson Fishing Pier Repairs, PA-04-MS-4576-PW-00389-PN-172586, Long Beach, Harrison County, Mississippi
Creators: name: United States. National Marine Fisheries Service. Southeast Region
Publisher: name: United States. National Marine Fisheries Service. Southeast Region
Year: 2022

description: SERO-2022-00865
Improving Reading Comprehension among Students Enrolled in Two Underperforming Schools in Durham County through the Read and Feed Program
Creators: name: Wiener, Miriam
name: Ourada,Grace
name: Munoz, Julie
name: Mathews, Dylan
Publisher: name: The University of North Carolina at Chapel Hill University Libraries
Year: 2023

description: Third grade reading proficiency is one of the most accurate measures of education access and quality over the short term, and health outcomes over the long term. Racial disparities in reading proficiency are shockingly stark in Durham County – only 36.8 percent of black children scored proficient in 3rd-grade reading compared with 76.8 percent of white children. To address this challenge, a two-year pilot program is proposed in two Durham County elementary schools chosen for their low 3rd-grade reading proficiency scores and reduced socioeconomic status of their student populations. The program will provide participating K-3 students with one-on-one after-school tutoring and a nutritious meal featuring locally grown produce. With the goal of increasing reading proficiency and improving overall nutrition status and knowledge, this initiative can address childhood literacy and health outcomes through community engagement and data-driven improvement.
Asymptotic Parameter Tracking Performance with Measurement Data of 1-bit Resolution
Creators: name: Stein, Manuel
name: Kürzl, Alexander
name: Mezghani, Amine
name: Nossek, Josef A.
Publisher: name: arXiv
Year: 2014
Subjects: subject: Information Theory (cs.IT)
subject: FOS: Computer and information sciences

description: The problem of signal parameter estimation and tracking with measurement data of low resolution is considered. In comparison to an ideal receiver with infinite receive resolution, the performance loss of a simplistic receiver with 1-bit resolution is investigated. For the case where the measurement data is preprocessed by a symmetric hard-limiting device with 1-bit output, it is well-understood that the performance for low SNR channel parameter estimation degrades moderately by 2/pi (-1.96 dB). Here we show that the 1-bit quantization loss can be significantly smaller if information about the temporal evolution of the channel parameters is taken into account in the form of a state-space model. By the analysis of a Bayesian bound for the achievable tracking performance, we attain the result that the quantization loss in dB is in general smaller by a factor of two if the channel evolution is slow. For the low SNR regime, this is equivalent to a reduced loss of sqrt(2/pi) (-0.98 dB). By simulating non-linear filtering algorithms for a satellite-based ranging application (GPS) and a UWB channel estimation problem, both with low-complexity 1-bit analog-to-digital converter (ADC) at the receiver, we verify that the analytical characterization of the tracking error is accurate. This shows that the performance loss due to observations with low amplitude resolution can, in practice, be much less pronounced than indicated by classical results. Finally, we discuss the implication of the result for medium SNR applications like channel estimation in the context of mobile wireless communications.
IMPROVING CHILD NUTRITION SECURITY THROUGH THE SCHOOL FOOD ENVIRONMENT IN NORTH CAROLINA: A policy analysis of School Meals for All, expansion of the Community Eligibility Provision, and elimination of the reduced-price meal co-pay
Creators: name: Chamberlin, Grace
Publisher: name: The University of North Carolina at Chapel Hill University Libraries
Year: 2023

description: One in six children in North Carolina experience food insecurity, and even more may not be receiving the nutritious diet they need to lead a healthy life.1 The school setting has enormous potential to improve child food insecurity, as students consume up to half of their daily calories at school and federally funded school meals are required to meet nutrition standards.2,3 Offering free meals can increase meal participation, particularly for the low-income students disproportionately impacted by low food security. The following policy analysis describes three potential policies that the state government could implement to address child nutrition insecurity by increasing participation in the National School Lunch Program: Universal School Meals, Community Eligibility Provision expansion, and permanently eliminating the Reduced-Price Co-pay. These policies, their benefits, and their barriers are described below and then scored based on state-level cost, potential impact (measured through increased meal participation), political feasibility, and school-level administrative burden. Ultimately, expanding Community Eligibility Provision participation emerged as the most cost-effective and equitable approach to improve child nutrition security through the school meal program in North Carolina.
title: Vorstellung des Flurnamenportals
Creators: name: Aehnlich, Barbara
name: Kunze, Petra
Publisher: name: Thüringer Universitäts- und Landesbibliothek Jena
Year: 2021
Subjects: subject: 430
subject: 943
subject: 020

description: Thüringer Flurnamenportal: Flurnamen als Brücke zwischen Gesellschaft und Wissenschaft ; Online-Tagung
title: North Kent LIDP Report
Creators: name: Ansari, Niki
name: Barron, Elliott
name: Baruwa, Zsofia
name: Cook, Lucy
name: Großgebauer, Swen
name: Hobbins, Joe
name: Holmes, Mark
name: James, Sabrina
name: Kotiadis, Kathy
name: Mitchell, Patrick
name: Morrison, Iain
name: Papadopoulos, Thanos
name: Ratcliffe, Chris
name: Rousell, Craig
name: Spiegler, V.L.M.
name: Whyte, Stephen
name: Woods, Kevin
Publisher: name: University of Kent
Year: 2025

description: This study explores options and scenarios to decarbonise an Industrial Symbiosis cluster in Kemsley, North Kent, UK. Decarbonisation strategies and technologies are considered in the context of existing operational demands and current decarbonisation landscape associated with the UK Government’s drive towards net zero by 2050.
Addressing the Impact of Climate Change-Induced Urbanization on Musculoskeletal Injuries: A Policy Analysis
Creators: name: Charles, Antoinette J.
Publisher: name: The University of North Carolina at Chapel Hill University Libraries
Year: 2023

description: This paper explores the intersection of climate change-induced urbanization and its impact on musculoskeletal injuries. The migration of people from rural to urban areas in low-and middle-income countries like Ethiopia has led to increased motorization, higher traffic density, and a surge in road traffic injuries and fatalities. The objective of the paper is to conduct a comprehensive policy analysis addressing the implications of climate change-induced urbanization on musculoskeletal injuries. The policy options evaluated include maintaining the status quo, enforcing seat belt usage, developing pedestrian-friendly infrastructure, and implementing a fossil fuel export tax. The analysis considers factors such as costs, effectiveness in prevention of musculoskeletal injuries, addressing climate change, feasibility for implementation, and financial equity. After evaluation, the fossil fuel export tax was determined to be an equitable, cost-effective solution that tackles the broader impact of climate change on forced displacement and migration, while supporting sustainability initiatives and road accident funds for victims.
Gestational thyroid hormone concentrations and risk of attention-deficit hyperactivity disorder in the Norwegian Mother, Father and Child Cohort Study
Creators: name: Reichborn-Kjennerud, T.
name: Aase, H.
name: Herring, A.H.
name: Drover, S.S.M.
name: Knudsen, G.
name: Meltzer, H.M.
name: Longnecker, M.P.
name: Zeiner, P.
name: Engel, S.M.
name: Nethery, R.C.
name: Zoeller, R.T.
name: Villanger, G.D.
Publisher: name: John Wiley and Sons Inc
Year: 2023

description: Background: Maternal thyroid function plays an important role in foetal brain development; however, little consensus exists regarding the relationship between normal variability in thyroid hormones and common neurodevelopmental disorders, such as attention-deficit hyperactivity disorder (ADHD). Objective: We sought to examine the association between mid-pregnancy maternal thyroid function and risk of clinically diagnosed ADHD in offspring. Methods: We conducted a nested case–control study in the Norwegian Mother, Father and Child Cohort Study. Among children born 2003 or later, we randomly sampled singleton ADHD cases obtained through linkage with the Norwegian Patient Registry (n = 298) and 554 controls. Concentrations of maternal triiodothyronine (T3), thyroxine (T4), T3-Uptake, thyroid-stimulating hormone (TSH) and thyroid peroxidase antibody (TPO-Ab) were measured in maternal plasma, collected at approximately 17 weeks' gestation. Indices of free T4 (FT4i) and free T3 (FT3i) were calculated. We used multivariable adjusted logistic regression to calculate odds ratios and accounted for missing covariate data using multiple imputation. We used restricted cubic splines to assess non-linear trends and provide flexible representations. We examined effect measure modification by dietary iodine and selenium intake. In sensitivity analyses, we excluded women with clinically significant thyroid disorders (n = 73). Results: High maternal T3 was associated with increased risk of ADHD (5th vs 1st quintile odds ratio 2.27, 95% confidence interval 1.21, 4.26). For FT4i, both the lowest and highest quintiles were associated with an approximate 1.6-fold increase in risk of ADHD, with similar trends found for T4. The FT4i association was modified by dietary iodine intake such that the highest risk strata were confined to the low intake group. Conclusions: Both high and low concentrations of maternal thyroid hormones, although within population reference ranges, increase the risk of ADHD in offspring. Increased susceptibility may be found among women with low dietary intake of iodine and selenium.
Lebertia (Lebertia) orientalis Walter 1898
Creators: name: Pešić, Vladimir
name: Chatterjee, Tapas
name: Bordoloi, Sabitry
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Trombidiformes
Lebertiidae
Lebertia
Lebertia orientalis

description: Lebertia (Lebertia) orientalis Walter, 1898
Records from the study area: Punjab—“ Lebertia (Pseudolebertia) orientalis “ Walter (1928); Prasad (1974).
Remarks: Only know from a single deutonymph.
Habitat: Mountain stream.
Distribution: India.
description: Published as part of Pešić, Vladimir, Chatterjee, Tapas & Bordoloi, Sabitry, 2010, A checklist of the water mites (Acari: Hydrachnidia) of India, with new records and description of one new species, pp. 1-54 in Zootaxa 2617 (1) on page 11, DOI: 10.11646/zootaxa.2617.1.1, http://zenodo.org/record/197964
Search for Dark Matter Axions with CAST-CAPP
Creators: name: Adair, C. M.
name: Altenmüller, K.
name: Anastassopoulos, V.
name: Cuendis, S. Arguedas
name: Baier, J.
name: Barth, K.
name: Belov, A.
name: Bozicevic, D.
name: Bräuninger, H.
name: Cantatore, G.
name: Caspers, F.
name: Castel, J. F.
name: Çetin, S. A.
name: Chung, W.
name: Choi, H.
name: Choi, J.
name: Dafni, T.
name: Davenport, M.
name: Dermenev, A.
name: Desch, K.
name: Döbrich, B.
name: Fischer, H.
name: Funk, W.
name: Galan, J.
name: Gardikiotis, A.
name: Gninenko, S.
name: Golm, J.
name: Hasinoff, M. D.
name: Hoffmann, D. H. H.
name: Ibáñez, D. Díez
name: Irastorza, I. G.
name: Jakovčić, K.
name: Kaminski, J.
name: Karuza, M.
name: Krieger, C.
name: Kutlu, Ç.
name: Lakić, B.
name: Laurent, J. M.
name: Lee, J.
name: Lee, S.
name: Luzón, G.
name: Malbrunot, C.
name: Margalejo, C.
name: Maroudas, M.
name: Miceli, L.
name: Mirallas, H.
name: Obis, L.
name: Özbey, A.
name: Özbozduman, K.
name: Pivovaroff, M. J.
name: Rosu, M.
name: Ruz, J.
name: Ruiz-Chóliz, E.
name: Schmidt, S.
name: Schumann, M.
name: Semertzidis, Y. K.
name: Solanki, S. K.
name: Stewart, L.
name: Tsagris, I.
name: Vafeiadis, T.
name: Vogel, J. K.
name: Vretenar, M.
name: Youn, S.
name: Zioutas, K.
Publisher: name: arXiv
Year: 2022
Subjects: subject: High Energy Physics - Experiment (hep-ex)
subject: Instrumentation and Detectors (physics.ins-det)
subject: FOS: Physical sciences

description: The CAST-CAPP axion haloscope, operating at CERN inside the CAST dipole magnet, has searched for axions in the 19.74 $μ$eV to 22.47 $μ$eV mass range. The detection concept follows the Sikivie haloscope principle, where Dark Matter axions convert into photons within a resonator immersed in a magnetic field. The CAST-CAPP resonator is an array of four individual rectangular cavities inserted in a strong dipole magnet, phase-matched to maximize the detection sensitivity. Here we report on the data acquired for 4124 h from 2019 to 2021. Each cavity is equipped with a fast frequency tuning mechanism of 10 MHz/min between 4.774 GHz and 5.434 GHz. In the present work, we exclude axion-photon couplings for virialized galactic axions down to $g_{aγγ} = 8 \times {10^{-14}}$ $GeV^{-1}$ at the 90% confidence level. The here implemented phase-matching technique also allows for future large-scale upgrades.
description: 24 pages, 5 figures, Published version available with Open Access at https://www.nature.com/articles/s41467-022-33913-6
Extended PIC schemes for physics in ultra-strong laser fields: review and developments
Creators: name: Gonoskov, A.
name: Bastrakov, S.
name: Efimenko, E.
name: Ilderton, A.
name: Marklund, M.
name: Meyerov, I.
name: Muraviev, A.
name: Sergeev, A.
name: Surmin, I.
name: Wallin, E.
Publisher: name: arXiv
Year: 2014
Subjects: subject: Plasma Physics (physics.plasm-ph)
subject: FOS: Physical sciences

description: We review common extensions of particle-in-cell (PIC) schemes which account for strong field phenomena in laser-plasma interactions. After describing the physical processes of interest and their numerical implementation, we provide solutions for several associated methodological and algorithmic problems. We propose a modified event generator that precisely models the entire spectrum of incoherent particle emission without any low-energy cutoff, and which imposes close to the weakest possible demands on the numerical time step. Based on this, we also develop an adaptive event generator that subdivides the time step for locally resolving QED events, allowing for efficient simulation of cascades. Further, we present a new and unified technical interface for including the processes of interest in different PIC implementations. Two PIC codes which support this interface, PICADOR and ELMIS, are also briefly reviewed.
MOESM5 of Heterologous overexpression, purification and functional analysis of plant cellulose synthase from green bamboo
Creators: name: Hsuan-Yu Huang
name: Cheng, Yi-Sheng
Publisher: name: Figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Medicine
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology

description: Additional file 5:Â Figure S5. GCâ MS mass spectrum of 1,4-glucan derivatives peak in Additional file 4: Figure S4 and Fig. 8.
Simulating pluralism: the language of democracy in hegemonic authoritarianism
Creators: name: Seraphine F. Maerz
Publisher: name: Taylor & Francis
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer
subject: Science Policy

description: This article analyses the language authoritarian leaders use to legitimate their rule. It examines the official speeches of autocrats in hegemonic regimes and compares them to the rhetorical styles of leaders in closed or competitive regimes and democracies. While recent autocracy research has drawn most attention to the phenomenon of competitive authoritarianism, the survival strategies of hegemonic regimes are less explored. Thus, the study focuses on the simulation of pluralism as a key feature of hegemonic regimes. By installing non-competitive multiparty systems which merely pretend pluralism, these regimes maintain a strong grip on power. The study finds that the leaders of hegemonic regimes use a surprisingly democratic style of language to sustain this façade of pluralism. The dictionary-based quantitative text analysis of 2074 speeches of current leaders in 22 countries illustrates that compared to other autocracies, hegemonic regimes overemphasize the (non-existing) democratic procedures in their country to fake a participatory form of government and gain national and international legitimacy. The subsequent case studies of Uzbekistan, Saudi Arabia, and Russia further reveal the differences in context and motives for autocrats in hegemonic, closed, and competitive regimes to use autocratic or democratic styles of language.
Utilizing workflows as roadmaps in new digital preservation programs
Creators: name: Purdome, Ciaran
Publisher: name: Zenodo
Year: 2024

description: A lightning talk presented at the 2024 iPRES conference in Ghent, Belgium on using workflows to plan and implement a new digital preservation program at Acadia University.

 

Keeping track of documentation and to-dos is challenging in the early stages of program development. Workflows, traditionally seen as documentation tools, offer a unique solution for tracking the development of digital preservation programs. Instead of viewing workflows as static documents, they can be transformed into dynamic roadmaps that guide practitioners through the program’s inception and evolution. By crafting bespoke, high-level workflows tailored to individual institutional contexts, practitioners can effectively use them as planning tools.
An epithelial-immune circuit amplifies inflammasome and IL-6 responses to SARS-CoV-2
Creators: name: Okuda, Kenichi
name: Boucher, Richard C.
name: Loome, Jennifer F.
name: Heise, Mark T.
name: Randell, Scott H.
name: Oguin III, Thomas H.
name: Ting, Jenny P.-Y.
name: Song, Dingka
name: Barnett, Katherine C.
name: Xie, Yuying
name: Yang, Shuangshuang
name: Asakura, Takanori
name: Lei, Yu Leo
name: Liang, Kaixin
name: Guo, Haitao
name: Taft-Benz, Sharon A.
name: Sempowski, Gregory D.
name: Gilmore, Rodney C.
Publisher: name: Cell Press
Year: 2022

description: Elevated levels of cytokines IL-1β and IL-6 are associated with severe COVID-19. Investigating the underlying mechanisms, we find that while primary human airway epithelia (HAE) have functional inflammasomes and support SARS-CoV-2 replication, they are not the source of IL-1β released upon infection. In leukocytes, the SARS-CoV-2 E protein upregulates inflammasome gene transcription via TLR2 to prime, but not activate, inflammasomes. SARS-CoV-2-infected HAE supply a second signal, which includes genomic and mitochondrial DNA, to stimulate leukocyte IL-1β release. Nuclease treatment, STING, and caspase-1 inhibition but not NLRP3 inhibition blocked leukocyte IL-1β release. After release, IL-1β stimulates IL-6 secretion from HAE. Therefore, infection alone does not increase IL-1β secretion by either cell type. Rather, bi-directional interactions between the SARS-CoV-2-infected epithelium and immune bystanders stimulates both IL-1β and IL-6, creating a pro-inflammatory cytokine circuit. Consistent with these observations, patient autopsy lungs show elevated myeloid inflammasome gene signatures in severe COVID-19., IL-1β and IL-6 are increased in severe COVID-19. Examining the underlying mechanisms, Barnett et al. show that SARS-CoV-2 E protein primes, and DNA from infected epithelial cells activates, inflammasome-dependent IL-1β secretion from leukocytes, which in turn stimulates IL-6 release from epithelial cells.
title: FEMA Fountain Pier Park Repairs
titleType: AlternativeTitle
title: Endangered Species Act - Section 7 Consultation Biological Opinion City of D’Iberville, Fountain Pier Park Repairs, City of D’Iberville, Harrison County, Mississippi
Creators: name: United States. National Marine Fisheries Service. Southeast Region
Publisher: name: United States. National Marine Fisheries Service. Southeast Region
Year: 2022

description: SERO-2022-01358
An extension of the Kadomtsev-Petviashvili hierarchy and its Hamiltonian structures
Creators: name: Wu, Chao-Zhong
name: Zhou, Xu
Publisher: name: arXiv
Year: 2015
Subjects: subject: Exactly Solvable and Integrable Systems (nlin.SI)
subject: FOS: Physical sciences

description: In this note we consider a two-component extension of the Kadomtsev-Petviashvili (KP) hierarchy represented with two types of pseudo-differential operators, and construct its Hamiltonian structures by using the $R$-matrix formalism.
description: 21 pages, to appear in J. Geom. Phys
Predicting functional long non-coding RNAs validated by low throughput experiments
Creators: name: Bailing Zhou
name: Yuedong Yang
name: Zhan, Jian
name: Xianghua Dou
name: Jihua Wang
name: Yaoqi Zhou
Publisher: name: Taylor & Francis
Year: 2019
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified

description: High-throughput techniques have uncovered hundreds and thousands of long non-coding RNAs (lncRNAs). Among them, only a tiny fraction has experimentally validated functions (EVlncRNAs) by low-throughput methods. What fraction of lncRNAs from high-throughput experiments (HTlncRNAs) is truly functional is an active subject of debate. Here, we developed the first method to distinguish EVlncRNAs from HTlncRNAs and mRNAs by using Support Vector Machines and found that EVlncRNAs can be well separated from HTlncRNAs and mRNAs with 0.6 for Matthews correlation coefficient, 64% for sensitivity, and 81% for precision for the independent human test set. The most useful features for classification are related to sequence conservations at RNA (for separating from HTlncRNAs) and protein (for separating from mRNA) levels. The method is found to be robust as the human-RNA-trained model is applicable to independent mouse RNAs with similar accuracy and to a lesser extent to plant RNAs. The method can recover newly discovered EVlncRNAs with high sensitivity. Its application to randomly selected 2000 human HTlncRNAs indicates that the majority of HTlncRNAs is probably non-functional but a large portion (nearly 30%) are likely functional. In other words, there is an ample number of lncRNAs whose specific biological roles are yet to be discovered. The method developed here is expected to speed up and reduce the cost of the discovery by prioritizing potentially functional lncRNAs prior to experimental validation. EVlncRNA-pred is available as a web server at http://biophy.dzu.edu.cn/lncrnapred/index.html. All datasets used in this study can be obtained from the same website.
Additional file 2 of A non-linear optimisation method to extract summary statistics from Kaplan-Meier survival plots using the published P value
Creators: name: Irvine, Andrew F.
name: Waise, Sara
name: Green, Edward W.
name: Stuart, Beth
Publisher: name: figshare
Year: 2020
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Biotechnology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 2. Summary of the length and status of the proportional hazards assumption in the included studies. Table of the length (months) of each study and whether the proportional hazards assumption had been checked or not from the 13 Kaplan-Meier plots used to validate the nlopt method [1, 26, 28, 29, 31–37].
Additional file 1 of A non-linear optimisation method to extract summary statistics from Kaplan-Meier survival plots using the published P value
Creators: name: Irvine, Andrew F.
name: Waise, Sara
name: Green, Edward W.
name: Stuart, Beth
Publisher: name: figshare
Year: 2020
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Biotechnology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1. Construction of the Kaplan-Meier survival table based on the equations defined in the Methods section. The calculations for 5 timepoints are shown but this would extend for n number of time points. By definition, t0 is the start of the trial so the survival probability is 1 and there are no events or censor values. The number at risk at t0 is the starting number of trial participants in each arm. For clarity, the columns for survival probability, censor values, events and number at risk are only presented for Arm 1. The equations for Arm 2 would otherwise be the same. The method works by first constructing the table above assuming no censoring. The corresponding Chi-square statistic or P value is then used as a fixed point for the non-linear optimisation algorithm to calculate the censor values (C1, C2, .., Cn) by iterating through possible values to satisfy the fixed value to come to an optimal solution. Ln (HR) and var. ln (HR) are then calculated based on these updated values.
Operational grid and environmental impacts for a V2G-enabled electric school bus fleet using DC fast chargers
Creators: name: Melanie Elliott
name: Noah Kittner
Publisher: name: Sustainable Production and Consumption
Year: 2021

description: As states replace diesel school buses with electric ones, utilities will want to control charging schedules to capture potential benefits on the grid and avoid all buses charging at the same time, adding a large electric load. Vehicle-to-grid (V2G) services can provide more grid stability and reduced carbon dioxide emissions than simple controlled charging systems, yet the grid impacts of V2G school buses have not been modeled using realistic school bus schedules. This paper develops a methodology for simulating the effect of managed charging of electric school buses on peak shaving in the state of North Carolina using V2G interactions and DC fast chargers to determine potential emissions reductions by minimizing peak load periods. The V2G-Sim model is used to manage fleet-wide charging, while minimizing peak generation of electricity on the grid and flattening the load curve under different battery capacities, charger power ratings, and fleet sizes. Historic annual peak hours are examined to determine the feasibility of reducing generation capacity, and the daily peak hours are examined to determine the potential peak shaving and subsequent avoided emissions. The results demonstrate that at full electric school bus replacement, 14,000 V2G buses can aggregate and shift 2.6 GWh in North Carolina, avoiding up to 1,130 t of carbon dioxide emissions per day, assuming decreased dependence on natural gas peaker plants. An additional 1,500 t of CO2 can be avoided by replacing diesel-powered buses compared to the 320,000 t total daily CO2 emissions from all activities in North Carolina. Additional emissions are avoided by the replacement of diesel buses with electric buses. The largest greenhouse gas emission benefit is the replacement of diesel with electric school buses, and the ability to shave peak loads is maximized on weekend days in the winter. The model can be used by researchers, the utility, and states as these entities evaluate the environmental and operational grid benefits of a V2G school bus program.
Additional file 4 of A non-linear optimisation method to extract summary statistics from Kaplan-Meier survival plots using the published P value
Creators: name: Irvine, Andrew F.
name: Waise, Sara
name: Green, Edward W.
name: Stuart, Beth
Publisher: name: figshare
Year: 2020
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Biotechnology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 4. Quoted P values nearer to the actual P values better approximate ln (HR) using the nlopt method with a non-exact P value. The nlopt method using a non-exact P value was used to calculate ln (HR) and var. ln (HR) with a range of non-exact P values. This started at the value quoted on the KM plot (1e-4) to values progressively closer to the actual value (4.48e-39).
title: Supplement to the American Samoa Longline Biological Opinion
titleType: AlternativeTitle
title: Endangered Species Act (ESA) Section 7(a)(2) Consultation Oceanic Whitetip Shark and Giant Manta Ray Supplemental Biological Opinion Supplement to the Authorization of the American Samoa Longline
Creators: name: United States. National Marine Fisheries Service. Pacific Islands Region
Publisher: name: United States. National Marine Fisheries Service. Pacific Islands Region
Year: 2022

description: PIRO-2022-02106
Hydrodynamic Interactions between Two Forced Objects of Arbitrary Shape: I Effect on Alignment
Creators: name: Goldfriend, Tomer
name: Diamant, Haim
name: Witten, Thomas A.
Publisher: name: arXiv
Year: 2015
Subjects: subject: Fluid Dynamics (physics.flu-dyn)
subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: We study the properties and symmetries governing the hydrodynamic interaction between two identical, arbitrarily shaped objects, driven through a viscous fluid. We treat analytically the leading (dipolar) terms of the pair-mobility matrix, affecting the instantaneous relative linear and angular velocities of the two objects at large separation. We prove that the instantaneous hydrodynamic interaction linearly degrades the alignment of asymmetric objects by an external time-dependent drive [Moths and Witten, Phys. Rev. Lett. 110, 028301 (2013)]. The time-dependent effects of hydrodynamic interactions are explicitly demonstrated through numerically calculated trajectories of model alignable objects composed of four stokeslets. In addition to the orientational effect, we find that the two objects usually repel each other. In this case the mutual degradation weakens as the two objects move away from each other, and full alignment is restored at long times.
description: 31 pages, 8 figures
Erneuerung aus dem lebendigem Geist
Creators: name: Biemer, Günter
name: Herbstrith, Waltraud
name: Korherr, Edgar Josef
name: Zimmer, Berthold
Publisher: name: Diakonia
Year: 1970

description: Diakonia, Bd. 18 Nr. 2 (1987): Diakonia, Band 18, Heft 2
The effect of unstable housing on HIV treatment biomarkers: An instrumental variables approach
Creators: name: Adimora, A.A.
name: Milam, J.
name: Kempf, M.-C.
name: Holman, S.
name: Cohen, M.
name: Galárraga, O.
name: Rana, A.
name: Rahman, M.
name: Metsch, L.R.
name: Kassaye, S.
name: Golub, E.T.
name: Sosanya, O.
name: Cohen, J.
Publisher: name: Elsevier Ltd
Year: 2018

description: Unstable housing, including homelessness, is a public policy concern for all populations, and more critically for people with a serious health condition such as HIV. We measure the effect of unstable housing on HIV treatment biomarkers: viral suppression (viral load < 200 HIV RNA copies per ml) and adequate CD4+ T-cell count (CD4>350 cells per μl). We use panel data (1995–2015) from 3082 participants of the Women's Interagency HIV Study (WIHS) sites in Bronx and Brooklyn (NY), Chicago (IL), Los Angeles and San Francisco (CA), and Washington (DC). The instrumental variable (IV) measures allocations for the Housing Opportunities for People with AIDS (HOPWA) per person newly infected with HIV, and it represents actual availability of housing assistance for HIV-positive persons at the metropolitan area level. Using an extended probit model with the IV, we find that unstable housing reduces the likelihood of viral suppression by 51 percentage points, and decreases the probability of having adequate CD4 cell count by 53 percentage points. The endogeneity-corrected results are larger than naïve probits, which show decreases of 8.1 and 7.8 percentage points, respectively. The hypothesized pathways for the effect are: decreased use of mental healthcare/counseling, any healthcare, and less continuity of care. Increasing efforts to improve housing assistance, including HOPWA, and other interventions to make housing more affordable for low-income populations, and HIV-positive populations in particular, may be warranted not only for the benefits of stable housing, but also to improve HIV-related biomarkers.
Additional file 3 of A non-linear optimisation method to extract summary statistics from Kaplan-Meier survival plots using the published P value
Creators: name: Irvine, Andrew F.
name: Waise, Sara
name: Green, Edward W.
name: Stuart, Beth
Publisher: name: figshare
Year: 2020
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Biotechnology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 3. Complete table of summary statistics extracted from 13 Kaplan-Meier plots comparing methods. This includes ln (HR), variance ln (HR), the lower and upper confidence intervals (95%), the P value, the non-exact P value used with nlopt and chi-squared value. This compares the Parmar method, nlopt method from this study (both exact and non-exact P value) and the actual statistics extracted from each published study [1, 26, 28, 29, 31–37].
Additional file 1: of Estimating health state utility from activities of daily living in the French National Hospital Discharge Database: a feasibility study with head and neck cancer
Creators: name: Schwarzinger, Michaël
name: Luchini, Stéphane
Publisher: name: Figshare
Year: 2019
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Plant Biology
subject: Computational Biology

description: Additional Methods. Imputation of mortality outside hospital. Table S1. Coding dictionary. Table S2. Study flowchart. Table S3. Eigenvalues of the Polychoric Correlation Matrix (two-parameter graded response model). Table S4. Parameter estimates (two-parameter graded response model). Table S5. Parameter estimates of the two-step selection model for “initial treatment at early stage” at 1 month of follow-up. Table S6. Parameter estimates of the two-step selection model for “initial treatment at early stage” at 6 months of follow-up. Table S7. Parameter estimates of the two-step selection model for “initial treatment at locally advanced stage” at 1 month of follow-up. Table S8. Parameter estimates of the two-step selection model for “initial treatment at locally advanced stage” at 6 months of follow-up. Table S9. Parameter estimates of the two-step selection model for “initial treatment with distant metastasis” at 1 month of follow-up. Table S10. Parameter estimates of the two-step selection model for “initial treatment with distant metastasis” at 12 months of follow-up. Table S11. Parameter estimates of the two-step selection model for “relapse treatment in the follow-up” at 1 month of follow-up. Table S12. Parameter estimates of the two-step selection model for “relapse treatment in the follow-up” at 12 months of follow-up. Table S13. Parameter estimates of the two-step selection model for “relapse-free in the follow-up” at 1 month of follow-up. Table S14. Parameter estimates of the two-step selection model for “relapse-free in the follow-up” at 12 months of follow-up. Table S15. Selection bias in post-acute care by health state and month of follow-up. (DOCX 208 kb)
Cohort profile: The women’s interagency HIV study (WIHS)
Creators: name: Benning, L.
name: Fischl, M.A.
name: Adimora, A.A.
name: Anastos, K.
name: Minkoff, H.
name: Cohen, M.
name: Ofotokun, I.
name: Tien, P.C.
name: Kassaye, S.G.
name: Wingood, G.
name: Ramirez, C.
name: Greenblatt, R.M.
name: Kempf, M.-C.
name: Gange, S.
Publisher: name: Oxford University Press
Year: 2018

description: Why was the cohort set up? The National Institutes of Health established the Women’s Interagency HIV Study (WIHS) in 1993 to study the impact and progression of HIV infection among women in response to the rising number of AIDS cases and the relative paucity of clinical, behavioural and epidemiological data in this population. Women now comprise more than 50% of people with HIV (PWH) worldwide.1 The WIHS is the largest and oldest ongoing prospective cohort study of women with and at risk for HIV infection in the world, and remains the leading study to document the experience of women with HIV (WWH) in the United States.
title: American Cruise Line Howard Amon Park Dolphin Replacement (Benton County)
titleType: AlternativeTitle
title: Endangered Species Act Section 7(a)(2) Biological Opinion and Magnuson–Stevens Fishery Conservation and Management Act Essential Fish Habitat Response for the Howard Amon Park Dolphin Replacement, Columbia River, Benton County, Washington.
Creators: name: United States. National Marine Fisheries Service. West Coast Region
Publisher: name: United States. National Marine Fisheries Service. West Coast Region
Year: 2022

description: WCRO-2022-00707