cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
3D U-Net Improves Automatic Brain Extraction for Isotropic Rat Brain Magnetic Resonance Imaging Data
Creators: name: Lee, Sung-Ho
name: Shih, Yen-Yu Ian
name: Hsu, Li-Ming
name: Wang, Shuai
name: Wang, Tzu-Wen Winnie
name: Walton, Lindsay
Publisher: name: Frontiers
Year: 2021

description: Brain extraction is a critical pre-processing step in brain magnetic resonance imaging (MRI) analytical pipelines. In rodents, this is often achieved by manually editing brain masks slice-by-slice, a time-consuming task where workloads increase with higher spatial resolution datasets. We recently demonstrated successful automatic brain extraction via a deep-learning-based framework, U-Net, using 2D convolutions. However, such an approach cannot make use of the rich 3D spatial-context information from volumetric MRI data. In this study, we advanced our previously proposed U-Net architecture by replacing all 2D operations with their 3D counterparts and created a 3D U-Net framework. We trained and validated our model using a recently released CAMRI rat brain database acquired at isotropic spatial resolution, including T2-weighted turbo-spin-echo structural MRI and T2*-weighted echo-planar-imaging functional MRI. The performance of our 3D U-Net model was compared with existing rodent brain extraction tools, including Rapid Automatic Tissue Segmentation, Pulse-Coupled Neural Network, SHape descriptor selected External Regions after Morphologically filtering, and our previously proposed 2D U-Net model. 3D U-Net demonstrated superior performance in Dice, Jaccard, center-of-mass distance, Hausdorff distance, and sensitivity. Additionally, we demonstrated the reliability of 3D U-Net under various noise levels, evaluated the optimal training sample sizes, and disseminated all source codes publicly, with a hope that this approach will benefit rodent MRI research community. Significant Methodological Contribution: We proposed a deep-learning-based framework to automatically identify the rodent brain boundaries in MRI. With a fully 3D convolutional network model, 3D U-Net, our proposed method demonstrated improved performance compared to current automatic brain extraction methods, as shown in several qualitative metrics (Dice, Jaccard, PPV, SEN, and Hausdorff). We trust that this tool will avoid human bias and streamline pre-processing steps during 3D high resolution rodent brain MRI data analysis. The software developed herein has been disseminated freely to the community.
sj-docx-4-dhj-10.1177_20552076221150581 - Supplemental material for Designing a mobile health smokeless tobacco cessation intervention in Odisha, India: User and provider perspectives
Creators: name: Panda, Rajmohan
name: Lahoti, Supriya
name: Mishra, Arti
name: Prabhu, Rajath R
name: Das, Sangeeta
name: Satapathy, Durga Madhab
name: Nazareth, Irwin
Publisher: name: SAGE Journals
Year: 2023
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: Cardiology
subject: 110306 Endocrinology
subject: FOS: Clinical medicine
subject: 110308 Geriatrics and Gerontology
subject: 111099 Nursing not elsewhere classified
subject: 111299 Oncology and Carcinogenesis not elsewhere classified
subject: 111702 Aged Health Care
subject: 111799 Public Health and Health Services not elsewhere classified
subject: 99999 Engineering not elsewhere classified
subject: FOS: Other engineering and technologies
subject: Anthropology
subject: FOS: Sociology
subject: 200299 Cultural Studies not elsewhere classified
subject: FOS: Other humanities
subject: 89999 Information and Computing Sciences not elsewhere classified
subject: FOS: Computer and information sciences
subject: 150310 Organisation and Management Theory
subject: FOS: Economics and business
subject: Science Policy
subject: 160512 Social Policy
subject: FOS: Political science
subject: Sociology

description: Supplemental material, sj-docx-4-dhj-10.1177_20552076221150581 for Designing a mobile health smokeless tobacco cessation intervention in Odisha, India: User and provider perspectives by Rajmohan Panda, Supriya Lahoti, Arti Mishra, Rajath R Prabhu, Sangeeta Das, Durga Madhab Satapathy and Irwin Nazareth in Digital Health
sj-docx-1-tct-10.1177_15330338231184995 - Supplemental material for Plasma Thioredoxin Reductase as a Potential Biomarker for Gynecologic Cancer
Creators: name: Zhu, Yinxing
name: Hu, Yixuan
name: Shi, Junfeng
name: Wei, Xiaowei
name: Song, Yaqi
name: Tang, Cuiju
name: Zhang, Wenwen
Publisher: name: SAGE Journals
Year: 2023
Subjects: classificationCode: 111299
subject: Oncology and Carcinogenesis not elsewhere classified
classificationCode: 110320
subject: Radiology and Organ Imaging
subject: Biochemistry

description: Supplemental material, sj-docx-1-tct-10.1177_15330338231184995 for Plasma Thioredoxin Reductase as a Potential Biomarker for Gynecologic Cancer by Yinxing Zhu, MS, Yixuan Hu, MS, Junfeng Shi, MD, Xiaowei Wei, MD, Yaqi Song, MD, Cuiju Tang, MD, PhD, and Wenwen Zhang, MD, PhD in Technology in Cancer Research & Treatment
sj-docx-1-pwq-10.1177_03616843231183946 - Supplemental material for A Brief Online Cognitive Dissonance-Based Intervention to Reduce Consideration of Cosmetic Surgery and Improve Body Image Among Chinese Women
Creators: name: Wu, Yi
name: Mulkens, Sandra
name: Atkinson, Melissa J.
name: Alleva, Jessica M.
Publisher: name: SAGE Journals
Year: 2023
Subjects: Gender studies
Psychology not elsewhere classified

description: Supplemental material, sj-docx-1-pwq-10.1177_03616843231183946 for A Brief Online Cognitive Dissonance-Based Intervention to Reduce Consideration of Cosmetic Surgery and Improve Body Image Among Chinese Women by Yi Wu, Sandra Mulkens, Melissa J. Atkinson and Jessica M. Alleva in Psychology of Women Quarterly
sj-docx-6-hss-10.1177_15563316231183971 – Supplemental material for Genicular Artery Embolization: A Promising Treatment Option for Recurrent Effusion Following Total Knee Arthroplasty
Creators: name: Lutz, Rex W.
name: Post, Zachary D.
name: Thalody, Hope S.
name: Czymek, Miranda M.
name: Ponzio, Danielle Y.
name: Kim, Christopher E.
name: Ong, Alvin C.
Publisher: name: SAGE Journals
Year: 2023
Subjects: classificationCode: 110323
subject: Surgery

description: Supplemental material, sj-docx-6-hss-10.1177_15563316231183971 for Genicular Artery Embolization: A Promising Treatment Option for Recurrent Effusion Following Total Knee Arthroplasty by Rex W. Lutz, Zachary D. Post, Hope S. Thalody, Miranda M. Czymek, Danielle Y. Ponzio, Christopher E. Kim and Alvin C. Ong in HSS Journal®
sj-docx-1-pus-10.1177_09636625231182528 – Supplemental material for Different periods, similar challenges, opposing paths: Exploring the social structure of popular science magazines in Turkey
Creators: name: Canpolat, Emre
Publisher: name: SAGE Journals
Year: 2023
Subjects: classificationCode: 200199
subject: Communication and Media Studies not elsewhere classified
subject: Science Policy

description: Supplemental material, sj-docx-1-pus-10.1177_09636625231182528 for Different periods, similar challenges, opposing paths: Exploring the social structure of popular science magazines in Turkey by Emre Canpolat in Public Understanding of Science
sj-docx-1-nms-10.1177_14614448231182620 – Supplemental material for Does aggressive commentary by streamers during violent video game affect state aggression in adolescents?
Creators: name: Lacko, David
name: Dufková, Eliška
name: Machackova, Hana
Publisher: name: SAGE Journals
Year: 2023
Subjects: classificationCode: 200199
subject: Communication and Media Studies not elsewhere classified

description: Supplemental material, sj-docx-1-nms-10.1177_14614448231182620 for Does aggressive commentary by streamers during violent video game affect state aggression in adolescents? by David Lacko, Eliška Dufková and Hana Machackova in New Media & Society
QSAR-Driven Design and Discovery of Novel Compounds With Antiplasmodial and Transmission Blocking Activities
Creators: name: Muratov, Eugene N.
name: Braga, Rodolpho C.
name: Neves, Bruno J.
name: Cassiano, Gustavo C.
name: Lima, Marilia N. N.
name: Bargieri, Daniel Y.
name: Andrade, Carolina H.
name: Melo-Filho, Cleber C.
name: Costa, Fabio T. M.
name: Calit, Juliana
name: Cravo, Pedro V. L.
name: Alves, Vinicius M.
Publisher: name: Frontiers
Year: 2018

description: Malaria is a life-threatening infectious disease caused by parasites of the genus Plasmodium, affecting more than 200 million people worldwide every year and leading to about a half million deaths. Malaria parasites of humans have evolved resistance to all current antimalarial drugs, urging for the discovery of new effective compounds. Given that the inhibition of deoxyuridine triphosphatase of Plasmodium falciparum (PfdUTPase) induces wrong insertions in plasmodial DNA and consequently leading the parasite to death, this enzyme is considered an attractive antimalarial drug target. Using a combi-QSAR (quantitative structure-activity relationship) approach followed by virtual screening and in vitro experimental evaluation, we report herein the discovery of novel chemical scaffolds with in vitro potency against asexual blood stages of both P. falciparum multidrug-resistant and sensitive strains and against sporogonic development of P. berghei. We developed 2D- and 3D-QSAR models using a series of nucleosides reported in the literature as PfdUTPase inhibitors. The best models were combined in a consensus approach and used for virtual screening of the ChemBridge database, leading to the identification of five new virtual PfdUTPase inhibitors. Further in vitro testing on P. falciparum multidrug-resistant (W2) and sensitive (3D7) parasites showed that compounds LabMol-144 and LabMol-146 demonstrated fair activity against both strains and presented good selectivity versus mammalian cells. In addition, LabMol-144 showed good in vitro inhibition of P. berghei ookinete formation, demonstrating that hit-to-lead optimization based on this compound may also lead to new antimalarials with transmission blocking activity.
Additional file 2 of The genetics of gaits in Icelandic horses goes beyond DMRT3, with RELN and STAU2 identified as two new candidate genes
Creators: name: Sigurðardóttir, Heiðrún
name: Boije, Henrik
name: Albertsdóttir, Elsa
name: Kristjansson, Thorvaldur
name: Rhodin, Marie
name: Lindgren, Gabriella
name: Eriksson, Susanne
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 2: Table S1. Descriptive statistics of the gait scores (other than pace). Number of assessments, mean score, standard deviation (sd), range, skewness, kurtosis, and a p-value from a Jarque–Bera Normality Test for the gaits (other than pace) assessed at breeding field tests for horses included in the dataset.
QSAR-Based Virtual Screening: Advances and Applications in Drug Discovery
Creators: name: Muratov, Eugene N.
name: Melo-Filho, Cleber C.
name: Neves, Bruno J.
name: Moreira-Filho, Jose Teofilo
name: Andrade, Carolina Horta
name: Braga, Rodolpho C.
Publisher: name: Frontiers
Year: 2018

description: Virtual screening (VS) has emerged in drug discovery as a powerful computational approach to screen large libraries of small molecules for new hits with desired properties that can then be tested experimentally. Similar to other computational approaches, VS intention is not to replace in vitro or in vivo assays, but to speed up the discovery process, to reduce the number of candidates to be tested experimentally, and to rationalize their choice. Moreover, VS has become very popular in pharmaceutical companies and academic organizations due to its time-, cost-, resources-, and labor-saving. Among the VS approaches, quantitative structure-activity relationship (QSAR) analysis is the most powerful method due to its high and fast throughput and good hit rate. As the first preliminary step of a QSAR model development, relevant chemogenomics data are collected from databases and the literature. Then, chemical descriptors are calculated on different levels of representation of molecular structure, ranging from 1D to nD, and then correlated with the biological property using machine learning techniques. Once developed and validated, QSAR models are applied to predict the biological property of novel compounds. Although the experimental testing of computational hits is not an inherent part of QSAR methodology, it is highly desired and should be performed as an ultimate validation of developed models. In this mini-review, we summarize and critically analyze the recent trends of QSAR-based VS in drug discovery and demonstrate successful applications in identifying perspective compounds with desired properties. Moreover, we provide some recommendations about the best practices for QSAR-based VS along with the future perspectives of this approach.
Convergence of distributed symbolic regression using metaheuristics
Creators: name: Cardoen, Ben
Publisher: name: Zenodo
Year: 2017
Subjects: subject: Genetic Programming
subject: Hyperheuristics
subject: Metaheuristics
subject: Epidemiology
subject: openMPI
subject: Python
subject: Symbolic Regression
subject: Distributed Computing
subject: FOS: Computer and information sciences

description: Symbolic regression (SR) fits a symbolic expression to a set of expected values. Amongst its advantages over other techniques is the ability for a practitioner to interpret the resulting expression, determine important features by their usage in the expression, and insights into the behavior of the resulting model such as continuity, derivatives and extrema. SR combines a discrete combinatoric problem, combining base functions, with the continuous optimization problem of selecting and mutating real valued constants. One of the main algorithms used in SR is Genetic Programming (GP). The convergence characteristics of SR using GP are still an open issue. The continuous aspect of the problem has traditionally been an issue in GP based symbolic regression. This paper will study convergence of a GP-SR implementation on selected benchmarks known for poor convergence characteristics. We introduce a cooling schedule on the mutation operator and observe the computational savings. The constant optimization problem is studied using a two phase approach. We apply a variation on constant folding and evaluate its effects. The hybridization of GP with 3 metaheuristics (Differential Evolution, Artificial Bee Colony, Particle Swarm Optimization) are evaluated. We use a distributed GP-SR implementation to evaluate the effect of topologies on the convergence characteristics of the algorithm and the difference in communication overheadand speedup. We introduce and evaluate a topology with the aim of finding a new balance between diffusion and communication and synchronization overhead. We intro-duce a variation of k-fold cross validation to estimate how accurate a generated solution is in predicting unknown datapoints. This validation technique is implemented in parallel in the algorithm combining both the advantages of cross validation with the increase in coverage of the search space. Our tool offers a wide array of statistics describing the convergence characteristics of the algorithm over time, offering practitioners nuanced insights into the algorithm as it approximates the symbolic regression problem. We combine our incremental support with a design of experiment technique applied on a simulator and evaluate the impact on the convergence characteristics in combination with our constant optimization approach on the one hand and the distributed algorithm on the other hand.
description: Master Thesis, University of Antwerp, Computer Science.
Altered Cortico-Subcortical Network After Adolescent Alcohol Exposure Mediates Behavioral Deficits in Flexible Decision-Making
Creators: name: Dannenhoffer, Carol A.
name: Shih, Yen-Yu Ian
name: Elton, Amanda
name: Lee, Sung-Ho
name: Robinson, Donita L.
name: Gomez-A, Alexander
name: Boettiger, Charlotte A.
name: Ban, Woomi
Publisher: name: Frontiers
Year: 2021

description: Behavioral flexibility, the ability to modify behavior according to changing conditions, is essential to optimize decision-making. Deficits in behavioral flexibility that persist into adulthood are one consequence of adolescent alcohol exposure, and another is decreased functional connectivity in brain structures involved in decision-making; however, a link between these two outcomes has not been established. We assessed effects of adolescent alcohol and sex on both Pavlovian and instrumental behaviors and resting-state functional connectivity MRI in adult animals to determine associations between behavioral flexibility and resting-state functional connectivity. Alcohol exposure impaired attentional set reversals and decreased functional connectivity among cortical and subcortical regions-of-interest that underlie flexible behavior. Moreover, mediation analyses indicated that adolescent alcohol-induced reductions in functional connectivity within a subnetwork of affected brain regions statistically mediated errors committed during reversal learning. These results provide a novel link between persistent reductions in brain functional connectivity and deficits in behavioral flexibility resulting from adolescent alcohol exposure.
Additional file 1 of Multi-level factors linked to young adult primary care transitions: evidence from a state all-payer claims analysis
Creators: name: Nowak, Sarah A.
name: Reblin, Maija
name: Fung, Mark
name: Turley, Chelsea
name: Threlkeld, Kirsten
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Geology
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences

description: Supplementary Material 1
Early Life Abuse Moderates the Effects of Intranasal Oxytocin on Symptoms of Premenstrual Dysphoric Disorder: Preliminary Evidence From a Placebo-Controlled Trial
Creators: name: Walsh, Erin C.
name: Girdler, Susan S.
name: Pedersen, Cort A.
name: Dichter, Gabriel S.
name: Eisenlohr-Moul, Tory A.
name: Rubinow, David R.
Publisher: name: Frontiers
Year: 2018

description: Background: Although intranasal oxytocin (OXT) has been proposed to be a promising treatment for some psychiatric disorders, little research has addressed individual difference factors that may predict response to OXT. One such factor is early life abuse (ELA), which has widespread influences on social-emotional processing and behavior. This single-blind, placebo-controlled crossover trial examined the role of ELA in shaping the effects of intranasal OXT (vs. placebo) on daily behavioral symptoms in women with three or more prospectively-diagnosed cycling symptoms of premenstrual dysphoric disorder (PMDD). Methods: Participants were ten women with PMDD (n = 8) or subthreshold PMDD (n = 2), who had experienced ELA prior to age 13 (n = 5) or no ELA (n = 5). They completed two study visits during the late luteal (premenstrual) phase: once following administration of intranasal OXT and once following intranasal placebo (counterbalanced). Participants then self-administered OXT or placebo at home three times per day for 5 days or until menstrual onset, and prospectively rated daily emotional symptoms of PMDD. Power was adequate to detect medium main and interactive effects. Results: Among women with ELA, intranasal OXT (vs. placebo) increased the premenstrual emotional symptoms of PMDD, whereas among women without ELA, OXT decreased symptoms. Conclusion: This study adds to a growing literature highlighting the importance of considering historical social contexts and traits (such as ELA) as moderators of therapeutic response to OXT.
sj-pdf-3-hpq-10.1177_13591053231184032 – Supplemental material for “God wastes nothing”: A consensual qualitative study of coping among Catholic individuals with cancer diagnoses
Creators: name: Shannonhouse, Laura
name: Lopez, Jorge
name: Hall, M Elizabeth Lewis
name: Silverman, Eric
name: Captari, Laura E
name: Park, Crystal L
name: McMartin, Jason
name: Kapic, Kelly
name: Aten, Jamie
Publisher: name: SAGE Journals
Year: 2023
Subjects: classificationCode: 170199
subject: Psychology not elsewhere classified
classificationCode: 110319
subject: Psychiatry (incl. Psychotherapy)
classificationCode: 111799
subject: Public Health and Health Services not elsewhere classified

description: Supplemental material, sj-pdf-3-hpq-10.1177_13591053231184032 for “God wastes nothing”: A consensual qualitative study of coping among Catholic individuals with cancer diagnoses by Laura Shannonhouse, Jorge Lopez, M Elizabeth Lewis Hall, Eric Silverman, Laura E Captari, Crystal L Park, Jason McMartin, Kelly Kapic and Jamie Aten in Journal of Health Psychology
sj-docx-1-tai-10.1177_20499361231185413 – Supplemental material for The global prevalence of human fascioliasis: a systematic review and meta-analysis
Creators: name: Rosas-Hostos Infantes, Luis Raúl
name: Paredes Yataco, Guillermo Andres
name: Ortiz-Martínez, Yeimer
name: Mayer, Treana
name: Terashima, Angelica
name: Franco-Paredes, Carlos
name: Gonzalez-Diaz, Esteban
name: Rodriguez-Morales, Alfonso J.
name: Bonilla-Aldana, D. Katterine
name: Vargas Barahona, Lilian
name: Grimshaw, Alyssa A.
name: Chastain, Daniel B.
name: Sillau, Stefan
name: Marcos, Luis A.
name: Henao-Martínez, Andrés F.
Publisher: name: SAGE Journals
Year: 2023
Subjects: classificationCode: 111099
subject: Nursing not elsewhere classified
classificationCode: 111403
subject: Paediatrics
classificationCode: 111599
subject: Pharmacology and Pharmaceutical Sciences not elsewhere classified
classificationCode: 111799
subject: Public Health and Health Services not elsewhere classified
classificationCode: 110203
subject: Respiratory Diseases

description: Supplemental material, sj-docx-1-tai-10.1177_20499361231185413 for The global prevalence of human fascioliasis: a systematic review and meta-analysis by Luis Raúl Rosas-Hostos Infantes, Guillermo Andres Paredes Yataco, Yeimer Ortiz-Martínez, Treana Mayer, Angelica Terashima, Carlos Franco-Paredes, Esteban Gonzalez-Diaz, Alfonso J. Rodriguez-Morales, D. Katterine Bonilla-Aldana, Lilian Vargas Barahona, Alyssa A. Grimshaw, Daniel B. Chastain, Stefan Sillau, Luis A. Marcos and Andrés F. Henao-Martínez in Therapeutic Advances in Infectious Disease
sj-docx-2-pcr-10.1177_26323524231182724 – Supplemental material for Inpatient hospice admissions. Who is admitted and why: a mixed-method prospective study
Creators: name: Haraldsdottir, Erna
name: Lloyd, Anna
name: Bijak, Martyn
name: Milton, Libby
name: Finucane, Anne M.
Publisher: name: SAGE Journals
Year: 2023
Subjects: classificationCode: 111702
subject: Aged Health Care

description: Supplemental material, sj-docx-2-pcr-10.1177_26323524231182724 for Inpatient hospice admissions. Who is admitted and why: a mixed-method prospective study by Erna Haraldsdottir, Anna Lloyd, Martyn Bijak, Libby Milton and Anne M. Finucane in Palliative Care and Social Practice
Additional file 5 of The genetics of gaits in Icelandic horses goes beyond DMRT3, with RELN and STAU2 identified as two new candidate genes
Creators: name: Sigurðardóttir, Heiðrún
name: Boije, Henrik
name: Albertsdóttir, Elsa
name: Kristjansson, Thorvaldur
name: Rhodin, Marie
name: Lindgren, Gabriella
name: Eriksson, Susanne
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 5: Table S2. Top 50 SNPs from the GWAS. A summary of the GWAS results for the 50 top SNPs.
Additional file 1 of Challenges and opportunities for increasing patient involvement in heart failure self-care programs and self-care in the post–hospital discharge period
Creators: name: Butler, Javed
name: Petrie, Mark C.
name: Bains, Marc
name: Bawtinheimer, Tracy
name: Code, Jillianne
name: Levitch, Teresa
name: Malvolti, Elmas
name: Monteleone, Pasquale
name: Stevens, Petrina
name: Vafeiadou, Jenny
name: Lam, Carolyn S. P.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 1. Opportunities and obstacles for people living with heart failure—Infographic.
sj-docx-1-sgr-10.1177_10464964231182130 – Supplemental material for A Text-Based Measure of Transactive Memory System Strength
Creators: name: Kush, Jonathan
name: Aven, Brandy
name: Argote, Linda
Publisher: name: SAGE Journals
Year: 2023
Subjects: classificationCode: 10105
subject: Group Theory and Generalisations
classificationCode: 150310
subject: Organisation and Management Theory

description: Supplemental material, sj-docx-1-sgr-10.1177_10464964231182130 for A Text-Based Measure of Transactive Memory System Strength by Jonathan Kush, Brandy Aven and Linda Argote in Small Group Research
Additional file 7 of The genetics of gaits in Icelandic horses goes beyond DMRT3, with RELN and STAU2 identified as two new candidate genes
Creators: name: Sigurðardóttir, Heiðrún
name: Boije, Henrik
name: Albertsdóttir, Elsa
name: Kristjansson, Thorvaldur
name: Rhodin, Marie
name: Lindgren, Gabriella
name: Eriksson, Susanne
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 7: Table S3. List of genes located in the vicinity of the regions identified on ECA4, 9, and 20. A list of all the genes located in the vicinity (± 500.00 kb) of the regions identified on ECA4: 4,222,615–4,228,914 bp [39–42, 56–64], ECA9: 11,533,922–13,457,268 bp [31, 32, 51, 52, 65–72] and ECA20: 52,057,378–52,057,378 bp.
Additional file 2 of The care cascade for hepatitis C virus and prognosis of chronic hepatitis C patients treated with antiviral agents in a tertiary hospital
Creators: name: Yoo, Sung Hwan
name: Kim, Myung
name: Kim, Sora
name: Lee, Jung Il
name: Lee, Kwan Sik
name: Lee, Hyun Woong
name: Lim, Jin Hong
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: Mental Health
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Additional file 2: Supplementary table 1. Characteristics of anti-HCV positive patients not tested for HCV RNA (n=2,076).
Perspectives on symptom experiences and symptom reporting among individuals on hemodialysis
Creators: name: Forfang, Derek
name: Dorough, Adeline
name: Narendra, Julia H
name: Hartwell, Lori
name: Abdel-Rahman, Emaad
name: Flythe, Jennifer E
Publisher: name: Oxford University Press (OUP)
Year: 2018

description: Background: Individuals on hemodialysis bear substantial symptom burdens, but providers often underappreciate patient symptoms. In general, standardized, patient-reported symptom data are not captured during routine dialysis care. We undertook this study to better understand patient experiences with symptoms and symptom reporting. In exploratory interviews, we sought to describe hemodialysis nurse and patient care technician perspectives on symptoms and symptom reporting. Methods: We conducted semi-structured interviews with 42 US hemodialysis patients and 13 hemodialysis clinic personnel. Interviews were conducted between February and October 2017 and were analyzed using thematic analysis. Results: Seven themes were identified in patient interviews: (i) symptoms engendering symptoms, (ii) resignation that life is dependent on a machine, (iii) experiencing the life intrusiveness of dialysis, (iv) developing adaptive coping strategies, (v) creating a personal symptom narrative, (vi) negotiating loss of control and (vii) encountering the limits of the dialysis delivery system. Overall, patient symptom experiences and perceptions appeared to influence symptom-reporting tendencies, leading some patients to communicate proactively about symptoms, but others to endure silently all but the most severe symptoms. Three themes were identified in exploratory clinic personnel interviews: (i) searching for symptom explanations, (ii) facing the limits of their roles and (iii) encountering the limits of the dialysis delivery system. In contrast to patients, clinic personnel generally believed that most patients were inclined to spontaneously report their symptoms to providers. Conclusions: Interviews with patients and dialysis clinic personnel suggest that symptom reporting is highly variable and likely influenced by many personal, treatment and environmental factors.
sj-docx-1-psx-10.1177_00323217231185706 – Supplemental material for Building Trust in Political Office: Testing the Efficacy of Political Contact and Authentic Communication
Creators: name: Weinberg, James
Publisher: name: SAGE Journals
Year: 2023
Subjects: classificationCode: 160607
subject: International Relations

description: Supplemental material, sj-docx-1-psx-10.1177_00323217231185706 for Building Trust in Political Office: Testing the Efficacy of Political Contact and Authentic Communication by James Weinberg in Political Studies
The Scholar Index:  Towards A Collaborative Citation Index For The Arts And Humanities
Creators: name: Colavizza, Giovanni
name: Romanello, Matteo
name: Babetto, Martina
name: Barbay, Vincent
name: Bolli, Laurent
name: Ferronato, Silvia
name: Kaplan, Frédéric
Publisher: name: Zenodo
Year: 2018
Subjects: citation mining
arts & humanities citation index
scholar index

description: We present the Scholar Index: a platform to index the literature and primary sources of the arts and humanities through citations. These resources are becoming increasingly digital, thanks in part to digitization campaigns and a shift towards digital publishing. Nevertheless, the coverage of commercial citation indexes is still poor and mostly limited to publications in English. This situation results in an untapped opportunity, as the literature refers to a wealth of primary sources from institutions such as libraries, archives and museums. As a consequence, a comprehensive indexing of its citations would constitute a unique opportunity to greatly enhance the search capacities of scholars and interconnect collections currently set apart.
Current  Star  Formation  Rates In  Early-Type  Disk  Galaxies   With  Outer  Rings
Creators: name: Kostiuk, Irina
name: Silchenko, Olga
Publisher: name: Zenodo
Year: 2018
Subjects: ring galaxies, star formation rates in galaxies

description: By using the atlas of stellar rings ARRAKIS (Comer\'on et al. 2014) we have compiled the list of early-type, S0-Sb, disk galaxies with outer stellar ring-like features (56 rings and 61 pseudorings). Current star formation, with the mean age of the young stellar population less than 200 Myr, is present in about a half of the rings. We have determined dust-corrected star formation rates, SFR, as well as SFR surface densities and absolute AB magnitudes in the ultraviolet (NUV and FUV bands of the GALEX cosmic mission) and (FUV-NUV) colors for the outer rings and for the galaxies as a whole. For further analysis we have took the SFR values averaged over FUV and NUV estimates. We demonstrate the relations between the dust-corrected SFR characteristics, UV colors, the galaxy morphological types, and integrated absolute magnitudes for the galaxies and their ring structures.
Additional file 1 of A prospective clinical study of the influence of oral protein intake on [18F]FET-PET uptake and test–retest repeatability in glioma
Creators: name: Chehri, Sarah
name: Henriksen, Otto Mølby
name: Marner, Lisbeth
name: Christensen, Mette
name: Muhic, Aida
name: Poulsen, Hans Skovgaard
name: Law, Ian
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Chemical Sciences not elsewhere classified
subject: Cancer
subject: Mental Health
subject: Plant Biology

description: Additional file1
title: تحقيق خلاف المؤرخين حول تاريخ المدرسة التيمية المحمودية بالشارقة/ علي محمد المطروشي.
Creators: name: المطروشي، علي محمد علي راشد حميد، 1964
Publisher: name: الأرشيف والمكتبة الوطنية
Year: 2020
Subjects: المدرسة التيمية المحمودية، - 1907-1926 - الشارقة (الإمارات العربية المتحدة إمارة).
التعليم - الشارقة (الإمارات العربية المتحدة إمارة) - 1900-1926
المدارس - الشارقة (الإمارات العربية المتحدة إمارة) - تاريخ

- شهد التعليم التقليدي في الإمارت في -العقد الأول من القرن العشرين-نقلة كبيرة في مستوى المؤسسة التعليمية فظهرت عدد من المدارس شبه النظامية المتفاوتة المستوى، مثل: مدرسة الأحمدية في دبي، والمدرسة التيمية المحمودية في الشارقة، ومدرسة الفتح في عجمان، ومدرسة الشيخ سلطان بن سالم القاسمي في رأس الخيمة والعديد أيضًا من المدارس. ولعل أولى هذه المدارس في النشأة هي المدرسة التيمية المحمودية بالشارقة التي أسسها تاجر اللؤلؤ الوجيه علي بن محمد المحمود (ت 1936م) وتُعد من أهم مآثر المحمود. وهنا يسترعى نظر الباحث وجود اضطراب حول تاريخ تأسيس المدرسة التيمية المحمودية وإغلاقها، وعمرها الحقيقي، وأيضًا حول مدة الدراسة فيها؛ لذا تطرّق الباحث لأهم مواضع الخلاف، محاولاً بحثها والتوصل إلى الرأي الأرجح حوله؛ عارضًا لمقابلات توثيقية مع اثنين من أقدم نوابغ طلبتها الذين امتدّ بهما العمر طويلًا، وتفيد فيها بما بلقي الضّوء على هذه الجزئية.
sj-docx-4-psx-10.1177_00323217231185706 – Supplemental material for Building Trust in Political Office: Testing the Efficacy of Political Contact and Authentic Communication
Creators: name: Weinberg, James
Publisher: name: SAGE Journals
Year: 2023
Subjects: classificationCode: 160607
subject: International Relations

description: Supplemental material, sj-docx-4-psx-10.1177_00323217231185706 for Building Trust in Political Office: Testing the Efficacy of Political Contact and Authentic Communication by James Weinberg in Political Studies
sj-pdf-1-smo-10.1177_20503121231182284 – Supplemental material for The impact of inhibitors on the quality of life in patients with hemophilia
Creators: name: Haghpanah, Sezaneh
name: Naderi, Majid
name: Kamalian, Sepideh
name: Tavoosi, Hakimeh
name: Parand, Shirin
name: Javanmardi, Neda
name: Karimi, Mehran
Publisher: name: SAGE Journals
Year: 2023
Subjects: classificationCode: 111708
subject: Health and Community Services
subject: Cardiology
classificationCode: 110599
subject: Dentistry not elsewhere classified
classificationCode: 110305
subject: Emergency Medicine
classificationCode: 110306
subject: Endocrinology
classificationCode: 110308
subject: Geriatrics and Gerontology
classificationCode: 110904
subject: Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
classificationCode: 111099
subject: Nursing not elsewhere classified
classificationCode: 111199
subject: Nutrition and Dietetics not elsewhere classified
classificationCode: 111299
subject: Oncology and Carcinogenesis not elsewhere classified
classificationCode: 110314
subject: Orthopaedics
classificationCode: 110604
subject: Sports Medicine
classificationCode: 110315
subject: Otorhinolaryngology
classificationCode: 111702
subject: Aged Health Care
classificationCode: 111403
subject: Paediatrics
classificationCode: 111599
subject: Pharmacology and Pharmaceutical Sciences not elsewhere classified
classificationCode: 170199
subject: Psychology not elsewhere classified
classificationCode: 110319
subject: Psychiatry (incl. Psychotherapy)
classificationCode: 111799
subject: Public Health and Health Services not elsewhere classified
classificationCode: 110203
subject: Respiratory Diseases
classificationCode: 160807
subject: Sociological Methodology and Research Methods
classificationCode: 110323
subject: Surgery
classificationCode: 70706
subject: Veterinary Medicine

description: Supplemental material, sj-pdf-1-smo-10.1177_20503121231182284 for The impact of inhibitors on the quality of life in patients with hemophilia by Sezaneh Haghpanah, Majid Naderi, Sepideh Kamalian, Hakimeh Tavoosi, Shirin Parand, Neda Javanmardi and Mehran Karimi in SAGE Open Medicine
53775: Letter: From Lt. Col J.T.I. Bosanquet to Robert Graves
Creators: name: Project Team, First World War Poetry Digital Archive
Publisher: name: University of Oxford
Year: 2024
Subjects: classificationCode: 430304
subject: British history
classificationCode: 430308
subject: European history (excl. British, classical Greek and Roman)
classificationCode: 430316
subject: International history

description: Instructions to Graves to report to the War Office.
sj-pdf-2-smo-10.1177_20503121231182284 – Supplemental material for The impact of inhibitors on the quality of life in patients with hemophilia
Creators: name: Haghpanah, Sezaneh
name: Naderi, Majid
name: Kamalian, Sepideh
name: Tavoosi, Hakimeh
name: Parand, Shirin
name: Javanmardi, Neda
name: Karimi, Mehran
Publisher: name: SAGE Journals
Year: 2023
Subjects: classificationCode: 111708
subject: Health and Community Services
subject: Cardiology
classificationCode: 110599
subject: Dentistry not elsewhere classified
classificationCode: 110305
subject: Emergency Medicine
classificationCode: 110306
subject: Endocrinology
classificationCode: 110308
subject: Geriatrics and Gerontology
classificationCode: 110904
subject: Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
classificationCode: 111099
subject: Nursing not elsewhere classified
classificationCode: 111199
subject: Nutrition and Dietetics not elsewhere classified
classificationCode: 111299
subject: Oncology and Carcinogenesis not elsewhere classified
classificationCode: 110314
subject: Orthopaedics
classificationCode: 110604
subject: Sports Medicine
classificationCode: 110315
subject: Otorhinolaryngology
classificationCode: 111702
subject: Aged Health Care
classificationCode: 111403
subject: Paediatrics
classificationCode: 111599
subject: Pharmacology and Pharmaceutical Sciences not elsewhere classified
classificationCode: 170199
subject: Psychology not elsewhere classified
classificationCode: 110319
subject: Psychiatry (incl. Psychotherapy)
classificationCode: 111799
subject: Public Health and Health Services not elsewhere classified
classificationCode: 110203
subject: Respiratory Diseases
classificationCode: 160807
subject: Sociological Methodology and Research Methods
classificationCode: 110323
subject: Surgery
classificationCode: 70706
subject: Veterinary Medicine

description: Supplemental material, sj-pdf-2-smo-10.1177_20503121231182284 for The impact of inhibitors on the quality of life in patients with hemophilia by Sezaneh Haghpanah, Majid Naderi, Sepideh Kamalian, Hakimeh Tavoosi, Shirin Parand, Neda Javanmardi and Mehran Karimi in SAGE Open Medicine
EU Legal Culture and Translation
Creators: name: Sosoni, Vilelmini
name: Biel, Łucja
Publisher: name: International Language and Law Association (ILLA)
Year: 2018
Subjects: subject: EU legal culture, multilingualism, EU translation, EU law, legal translation, EU terminology, language and law, hybridity
subject: Social and Behavioral Sciences: Linguistics: Applied Linguistics; Arts and Humanities: Language Interpretation and Translation

description: This article introduces the special issue of JLL on EU legal culture and translation. The introduction gives an overview of the papers comprised in the special issue and provides the theoretical background to set the scene for the discussion in the papers. The special issue is a follow-up on the panel organised at the Language and Law in a World of Media, Globalisation and Social Conflicts conference at the University of Freiburg. We argue that the EU legal culture is a perfect case in point for the study of the intersection between law and language. Due to the extreme degree of mediation and filtering of law through the EU’s official languages, the EU legal culture emerges through translation as a hybrid supranational pan-European construct with mutual dependencies on national legal cultures. The contributions to the special issues address various aspects of the law and language intersection in the EU context: the role of English as the EU’s lingua franca, the impact of national legal cultures on legal translation, strategic ambiguity and its interpretation by the Court of Justice of the European Union (CJEU), the impact of EU integration on legal languages, and finally, framing and ideology in EU legal translation. Overall, by approaching the EU legal culture from various perspectives, this special issue refines our understanding of how the EU legal culture is affected by multilingual translation.

Cite as: Sosoni & Biel, JLL 7 (2018), 1–7, DOI: 10.14762/jll.2018.001
description: International Journal of Language & Law (JLL), Vol 7: EU Legal Culture and Translation
The Role of EU Legal English in Shaping EU Legal Culture
Creators: name: Bajčić, Martina
Publisher: name: International Language and Law Association (ILLA)
Year: 2018
Subjects: subject: EU law and language, legal culture, neutral terms, EU legal English as a lingua franca
subject: Social and Behavioral Sciences: Linguistics: Applied Linguistics; Arts and Humanities: Language Interpretation and Translation

description: There is no denying that a change in the languages and cultures of European law is taking place. Indeed, many scholars speak of a hybridization of legal languages in the EU under the influence of EU legislation (e.g. Koskinen, 2000; Mori, 2011) and the emergence of a new European legal culture due to the Europeanisation of law (Graziadei, 2015). Exploring the interfaces of law, language and culture in the EU, this paper places emphasis on the role of English as a lingua franca in the EU in conceptualizing a common EU legal culture. The alleged neutrality of English and the importance of neutral terminology in EU legal drafting are examined against the backdrop of autonomous concepts of multilingual EU law. Arguing that the relationship of EU and national legal culture should not be framed in terms of opposites, but rest on the ideas of integration and synthesis, the author draws an analogy between the concepts of EU legal culture – construed as “law in action” – and EU citizenship, underlining the important role of the Court of Justice of the EU in shaping EU law and developing autonomous concepts.

Cite as: Bajčić, JLL 7 (2018), 8–24, DOI: 10.14762/jll.2018.008
description: International Journal of Language & Law (JLL), Vol 7: EU Legal Culture and Translation
SAHEL ET SAHARA : LES ETATS FACE A LA MONDIALISATION DU CRIME ORGANISE
Creators: name: LAAGOUZ, Loukmane
name: BENMESSAOUD, Abdelmourhit
Publisher: name: Revue Economie, Gestion et Société
Year: 2016
Subjects: Failed states - Organized border crime - Sahel and Sahara - Terrorism - Management approaches - International community.

description: If the security is considering such as an incontestable foundation of foreign policy of states, the identification and the evaluation of the threat remain the priority of security strategies. Since the Westphalia agreements, crossing by Yalta arrangements, the collapse of Berlin wall and the attack of the world trade center, the treat has known a huge change. This change affects not only it’s nature, the level of priority but also the extent of reaction. This fact is more evident in failed states. To this fact, the Sahel and Sahara region has all the ingredients in terms of vulnerability, corruption, austerity and decline of the power of states, to the extent of being lawless. The Sahelistan, qualified as being a grey area, promotes criminal and terrorist actions of organizations that are striving to do business. So that they cancreate wealth according to management approaches that have the same efficiency of lawful business. Hence, they infiltrate into the formal economy, shaping territories which will enable this structures to win the heart and minds of the people there. These organizations are trying hard to normalize their existence and diversify their activities by promoting innovation and adaptation. All of this is due to the fact that they manage shrewdly an array of trafficking. Confronted with huge endemic problems, the states of this region cannot eradicate groups of organized crime without the true help of the international community. This support has been delayed in spite of terrorist threat existing in this region.
description: Revue Economie, Gestion et Société, No 7 (2016)
Supplemental Material - Optimal and politically opportune language policies for the vitality of minority languages
Creators: name: Wickström, Bengt-Arne
Publisher: name: SAGE Journals
Year: 2023
Subjects: subject: Sociology
subject: FOS: Sociology

description: Supplemental Material for Optimal and politically opportune language policies for the vitality of minority languages by Bengt-Arne Wickström in Rationality and Society
sj-docx-2-sjs-10.1177_14574969231181232 – Supplemental material for Ultrasound-guided closure of the femoral artery during venoarterial decannulation using a large-bore closure device
Creators: name: Rahman, Tasnia
name: Herajärvi, Johanna
name: Ahonen, Henri
name: Jormalainen, Mikko
name: Syrjälä, Simo
name: Järvinen, Tommi
name: Juvonen, Tatu
name: Dahlbacka, Sebastian
Publisher: name: SAGE Journals
Year: 2023
Subjects: classificationCode: 110323
subject: Surgery

description: Supplemental material, sj-docx-2-sjs-10.1177_14574969231181232 for Ultrasound-guided closure of the femoral artery during venoarterial decannulation using a large-bore closure device by Tasnia Rahman, Johanna Herajärvi, Henri Ahonen, Mikko Jormalainen, Simo Syrjälä, Tommi Järvinen, Tatu Juvonen and Sebastian Dahlbacka in Scandinavian Journal of Surgery
sj-docx-1-imj-10.1177_10815589231185542 – Supplemental material for Survival of small-cell lung cancer patients after surgery: a single-center retrospective cohort study
Creators: name: Zheng, Zhibo
name: Zhu, Danyang
name: Liu, Lei
name: Chen, Michael W
name: Li, Guiping
name: Geng, Ruixuan
name: Zhang, Ying
name: Huang, Cheng
name: Tian, Zhenhuan
name: Liu, Hongsheng
name: Li, Shanqing
name: Chen, Yeye
Publisher: name: SAGE Journals
Year: 2023
Subjects: Medicine

description: Supplemental material, sj-docx-1-imj-10.1177_10815589231185542 for Survival of small-cell lung cancer patients after surgery: a single-center retrospective cohort study by Zhibo Zheng, Danyang Zhu, Lei Liu, Michael W Chen, Guiping Li, Ruixuan Geng, Ying Zhang, Cheng Huang, Zhenhuan Tian, Hongsheng Liu, Shanqing Li and Yeye Chen in Journal of Investigative Medicine
Additional file 9 of The genetics of gaits in Icelandic horses goes beyond DMRT3, with RELN and STAU2 identified as two new candidate genes
Creators: name: Sigurðardóttir, Heiðrún
name: Boije, Henrik
name: Albertsdóttir, Elsa
name: Kristjansson, Thorvaldur
name: Rhodin, Marie
name: Lindgren, Gabriella
name: Eriksson, Susanne
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 9: Table S4. Number of horses within each group of horses with variable pacing ability. The number of horses with different haplotypes on ECA4 and ECA9 in groups of horses with variable pacing ability.
sj-pdf-1-cre-10.1177_02692155231185446 - Supplemental material for Physical functioning factors predicting a return home after stroke rehabilitation: A systematic review and meta-analysis
Creators: name: Chevalley, Odile
name: Truijen, Steven
name: Opsommer, Emmanuelle
name: Saeys, Wim
Publisher: name: SAGE Journals
Year: 2023
Subjects: classificationCode: 110904
subject: Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
classificationCode: 110314
subject: Orthopaedics
classificationCode: 110604
subject: Sports Medicine

description: Supplemental material, sj-pdf-1-cre-10.1177_02692155231185446 for Physical functioning factors predicting a return home after stroke rehabilitation: A systematic review and meta-analysis by Odile Chevalley, Steven Truijen, Emmanuelle Opsommer and Wim Saeys in Clinical Rehabilitation