cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Scolopia inappendiculata H. Perrier
Creators: name: Applequist, Wendy L.
name: Schatz, George E.
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Malpighiales
Salicaceae
Scolopia
Scolopia inappendiculata

description: 5. Scolopia inappendiculata H.Perrier Mémoires du Muséum national d’Histoire naturelle, n.s., 13: 278 (1940). — Type: Madagascar. Prov. Mahajanga, bois sablonneux aux environs de Majunga, XI.1903, fl., Perrier de la Bâthie 1612bis (holo-, P [P00077430]!; fragment, L, photo seen). ADDITIONAL MATERIAL EXAMINED. — Madagascar. Prov.Mahajanga, Antsely, district de Mitsinjo, 29.XI.1951, fr., Service Forestier 5403 (P). — Restes de forêts dans les vallons du plateau de Berivotra, au SE de Majunga, vers 150 m d’alt., 23.IX.1957, fr., Service Forestier 18456 (P). — Ambongo, lisière S de la forêt de Tsiombikibo (Mitsinjo), 18.XI.1965, fl., Service Forestier 24203 (P). — Vallon, sur le plateau de Berovotra, au S de Majunga, 24.XI.1965, post-fl., Service Forestier 24285 (P). DISTRIBUTION AND HABITAT. — Scolopia inappendiculata occurs in dry forest in northwestern Madagascar (Fig. 6), on sand. REMARKS Scolopia inappendiculata is a small tree or large shrub with platanoid bark. It is the only species found around Mahajanga, and is distinguished from species of the xerophytic group known from the extreme north by its larger, often shortacuminate leaves and few or absent spines. CONSERVATION STATUS The preliminary assessment of the conservation status of Scolopia inappendiculata is Endangered (EN B1ab(iii)+B2ab(iii)). It is known from at most four locations in the region of Mahajanga, with an Extent of Occurrence of 1161 km 2 and a minimum Area of Occupancy of 16 km 2; the maximum potential Area of Occupancy is certainly less than 500 km 2 given that much of the area within the EOO polygon consists of the delta of the Betsiboka River. The species has not been recollected for almost fifty years, despite the accessible terrain, and the limited remaining natural vegetation in the area is subject to continuing habitat degradation.
description: Published as part of Applequist, Wendy L. & Schatz, George E., 2016, A synoptic revision of the Malagasy species of Scolopia Schreb. (Salicaceae, Scolopieae), pp. 99-115 in Adansonia 38 (1) on page 109, DOI: 10.5252/a2016n1a6, http://zenodo.org/record/4598915
Xylella fastidiosa in the Balearic Islands: a genetic diversity hotspot in Europe
Creators: name: Diego, Olmo
name: Nieto Alicia
name: Borràs David
name: Pedrosa Ana
name: Montesinos Marina
name: García Juan De Dios
name: Beidas Omar
name: Andreu, Juan
name: Aura, Pascual
name: Eduardo, Moralejo
Publisher: name: Zenodo
Year: 2021
Subjects: subject: plant health
subject: xylella
subject: http://id.agrisemantics.org/gacs/C20262
subject: http://id.agrisemantics.org/gacs/C764
subject: http://id.agrisemantics.org/gacs/C2603

description: The Balearic Islands hold one of the major genetic diversity of the pathogen Xylella fastidiosa in Europe. To date four genetic lineages, ST1, ST7, ST 80 and ST81, belonging to the three formally known subspecies, fastidiosa, multiplex and pauca have been detected in the islands. Recently, we have unravelled the origin of two of these introductions in the island of Mallorca, the ST1 of subsp. fastidiosa and the ST81 of subsp. multiplex. They were associated with a long overlooked outbreak of almond leaf scorch disease traced back to 1993 (Moralejo et al. 2020). Less is known about the origin of the ST80 (subsp. pauca) in Ibiza, although there is circumstantial evidence that would indicate it was introduced through the ornamental plant trade at least one decade ago. The ST80 produces a lethal dieback of olive trees; however, they seem less virulent towards olive trees than its counterpart ST53 in Apulia, Italy. Nonetheless, it poses a considerable threat to mainland olive oil production. The other main threat is the ST1 responsible of Pierce’s disease, which is still confined in the island of Mallorca (Moralejo et al. 2019). We used a large database of more than 13,000 samples analysed since 2016 to highlight general aspects of Xylella’s biology, including population genetics, epidemiology, landscape impact, dispersal, phylogenetic signal in host range and disease control. Most of the characteristics related to Pierce’s disease and almond leaf scorch disease repeat those general patterns observed in California, but others seem to be specific to the Balearic Islands.
description: ES; PPT; dolmo@semilla-caib.es
Additional file 3: of Landscape of transcriptional deregulation in lung cancer
Creators: name: Zhang, Shu
name: Li, Mingfa
name: Ji, Hongbin
name: Fang, Zhaoyuan
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Computational Biology

description: Figure S2. Down-regulation of TFs in LUSC. (A) Consistency of down-regulated TFs identified in the LUSC and LUSC2 datasets. (B) Clustering of down-regulated TFs shared in the two LUSC datasets. Cluster membership was determined using Fisherâ s exact test (p<0.05). (C) DMRT3 expression grouped by DMRT3 copy number status (deletion vs. non-deletion) (Wilcoxon signed-rank test). (D) DMRT3 loss status in relation to TP63 expression (Wilcoxon signed-rank test). (E) DMRT3 loss status in relation to SOX2 expression (Wilcoxon signed-rank test). (F) SOX2 (red) and DMRT3 (blue) binding motifs on the TP63 promoter (-10kb to +10kb of TSS). Genomic coordinates are according to the hg19 assembly. (PDF 92 kb)
Detection of recombination events in Xylella fastidiosa genomes of different Spanish strains
Creators: name: F, Arias-Giraldo Luis
name: Neha, Potnis
name: De La Fuente Leonardo,
name: Eduardo, Moralejo
name: Ester, Marco-Noales
name: P, Velasco-Amo María
name: Miguel, Román-Écija
name: Juan, Imperial
name: B, Landa Blanca
Publisher: name: Zenodo
Year: 2021
Subjects: subject: plant health
subject: xylella
subject: http://id.agrisemantics.org/gacs/C20262
subject: http://id.agrisemantics.org/gacs/C764

description: Xylella fastidiosa (Xf) has the capacity of uptaking extracellular DNA from the environment and incorporate it into its genome by homologous recombination, process known as Natural Competence. The process of genetic acquisition and recombination of extracellular DNA could be related to the acquisition of new traits such as antibiotic resistance and virulence factors, giving rise to the origin of new pathotypes. We took a step forward in comparative genomics analysis of Spanish populations of Xf by determining the complete genome of several isolates from Alicante, Mallorca and Ibiza and established potential recombination events that may have occurred with isolates from other places in the world. For this purpose, we used combined Illumina and Oxford Nanopore sequencing platforms and combined assembly approaches to obtain complete circularized genomes. Our results showed that olive and almond isolates belonging to subspecies pauca ST80 from Ibiza (Balearic Islands), the only place where this ST has been detected, showed an unusual level of recombination, being so far the isolates showing the highest number of recombination events among all the Xf isolates sequenced to date. On the order hand, we have confirmed the high degree of homology among genomes from Xf strains from Mallorca and California belonging to subspecies fastidiosa ST1 and subspecies multiplex ST81 isolated from almond and grapes, and we have also identified specific long-size genomic rearrangements in isolates of Xf subspecies multiplex ST6 from Alicante, compared to their homologous strains from the Americas. Research is now underway to determine the source and the functionality of these recombinant genes and their role in pathogenicity.
description: ES; PPT; lfarias@ias.csic.es
Additional file 5: of Landscape of transcriptional deregulation in lung cancer
Creators: name: Zhang, Shu
name: Li, Mingfa
name: Ji, Hongbin
name: Fang, Zhaoyuan
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Environmental Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Developmental Biology

description: Figure S4. The complete version of Fig. 7c, showing the global TF deregulation patterns across the five datasets: LUAD, LUAD2, LUSC, LUSC2 and SCLC. Colors reflected the log2 scaled number of a TFâ s targets, with up-regulated TFs in red and down-regulated in blue. (PDF 22 kb)
Understanding deterministic diffusion by correlated random walks
Creators: name: Klages, R.
name: Korabel, N.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Chaotic Dynamics (nlin.CD)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: Low-dimensional periodic arrays of scatterers with a moving point particle are ideal models for studying deterministic diffusion. For such systems the diffusion coefficient is typically an irregular function under variation of a control parameter. Here we propose a systematic scheme of how to approximate deterministic diffusion coefficients of this kind in terms of correlated random walks. We apply this approach to two simple examples which are a one-dimensional map on the line and the periodic Lorentz gas. Starting from suitable Green-Kubo formulas we evaluate hierarchies of approximations for their parameter-dependent diffusion coefficients. These approximations converge exactly yielding a straightforward interpretation of the structure of these irregular diffusion coeficients in terms of dynamical correlations.
description: 13 pages (revtex) with 5 figures (postscript)
Additional file 7 of Estradiol-mediated inhibition of Sp1 decreases miR-3194-5p expression to enhance CD44 expression during lung cancer progression
Creators: name: Young, Ming-Jer
name: Chen, Yung-Ching
name: Wang, Shao-An
name: Chang, Hui-Ping
name: Yang, Wen-Bin
name: Lee, Chia-Chi
name: Liu, Chia-Yu
name: Tseng, Yau-Lin
name: Wang, Yi-Ching
name: Sun, H. Sunny
name: Chang, Wen-Chang
name: Hung, Jan-Jong
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Additional file 7: Supplementary Tables.
Effects of Cost and Campaign Advertising on Support for California’s Proposition 37
Creators: name: McFadden, Brandon R.
name: Lusk, Jayson L.
name: McFadden, Brandon R.
name: Lusk, Jayson L.
Publisher: name: Unknown
Year: 2013
Subjects: subject: Crop Production/Industries
subject: Food Consumption/Nutrition/Food Safety
subject: Food Security and Poverty
subject: biotechnology
subject: campaign advertising
subject: genetically engineered
subject: genetically modified
subject: mandatory labeling
subject: perceptions
subject: Proposition 37

description: Proposition 37 would have required genetically engineered food in California to be labeled. This paper reports the results of a survey designed to determine Californians’ voting intentions prior to the vote, perceptions about the prevalence of genetically engineered foods in the United States, willingness to pay for a mandatory label, and effectiveness of advocacy advertising. Overall, Californians had inaccurate knowledge about the prevalence of genetically engineered foods, and stated they were willing to pay up to 13.8% higher food costs on average for a mandatory label. Findings suggest that the effectiveness of opposition advertising was likely a formative factor in the defeat of Proposition 37.
Additional file 2 of Genetic diversity and genome recombination in Yam mild mosaic virus isolates
Creators: name: Zou, Cheng-Wu
name: Meng, Jiao-Rong
name: Yao, Zi-Ting
name: Zhang, Lei
name: Wang, Zhi-Qiang
name: Wei, Ben-Hui
name: Chen, Bao-Shan
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 2: Table S2. Genome features of YMMV isolates.
Power law for the calm-time interval of price changes
Creators: name: Kaizoji, Taisei
name: Kaizoji, Michiyo
Publisher: name: arXiv
Year: 2003
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Physics and Society (physics.soc-ph)
subject: Statistical Finance (q-fin.ST)
subject: FOS: Physical sciences
subject: FOS: Economics and business

description: In this paper, we describe a newly discovered statistical property of time series data for daily price changes. We conducted quantitative investigation of the {\it calm-time intervals} of price changes for 800 companies listed in the Tokyo Stock Exchange, and for the Nikkei 225 index over a 27-year period from January 4, 1975 to December 28, 2001. A calm-time interval is defined as the interval between two successive price changes above a fixed threshold. We found that the calm-time interval distribution of price changes obeys a power law decay. Furthermore, we show that the power-law exponent decreases monotonically with respect to the threshold. Keyword: econophysics, stock price changes, calm time interval, power-laws; PACS: 89.90.+n; 05.40.Df;
description: 14 pages, 7 figures
A Meta-Analysis of Geographical Indication Food Valuation Studies: What Drives the Premium for Origin-Based Labels?
Creators: name: Deselnicu, Oana C.
name: Costanigro, Marco
name: Souza-Monteiro, Diogo M.
name: McFadden, Dawn Thilmany
name: Deselnicu, Oana C.
name: Costanigro, Marco
name: Souza-Monteiro, Diogo M.
name: McFadden, Dawn Thilmany
Publisher: name: Unknown
Year: 2013
Subjects: subject: Crop Production/Industries
subject: Food Consumption/Nutrition/Food Safety
subject: Health Economics and Policy
subject: International Relations/Trade
subject: food valuation
subject: geographical indications (GI)
subject: meta-analysis
subject: price premium
subject: Protected Designations of Origin (PDO)
subject: Protected Geographical Indications (PGI)
subject: trademark

description: We conduct a meta-analysis of studies estimating price premiums for agricultural products differentiated by Geographical Indication (GI). Models accounting for differences across product characteristics (food categories) and institutions (PDO, PGI, trademarks) explain a large portion of the variance in estimated premiums. Specifically, GIs capture the highest percentage premium in markets for products with short supply chains and relatively low added value (e.g., agricultural commodities). The premium is lower for wine and olive oil, where alternative means of product differentiation (e.g., branding) exist. Controlling for product characteristics, GIs adopting stricter regulations (PDO) yield larger premiums than less regulated ones (PGI).
MOESM7 of Measuring early childhood development in multiple contexts: the internal factor structure and reliability of the early Human Capability Index in seven low and middle income countries
Creators: name: Sincovich, Alanna
name: Gregory, Tess
name: Zanon, Cristian
name: Santos, Daniel
name: Lynch, John
name: Brinkman, Sally
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Science Policy

description: Additional file 7: Table S7. Factor loadings from confirmatory factor analysis in Brazil.
Aeolidiidae Gray 1827
Creators: name: Mead, A.
name: Carlton, J. T.
name: Griffiths, C. L.
name: Rius, M.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Nudibranchia
Aeolidiidae

description: Family AEOLIDIIDAE   Anteaeolidiella indica (Bergh, 1888) Cryptogenic (= Aeolidiella indica; = Aeolidiella multicolor Macnae, 1954; = Aeolidiella saldanhensis Barnard, 1927)
 Another species probably transported by shipping globally, it now occurs in the Pacific (most records), Atlantic (apparently isolated occurrences in the Mediterranean, Brazil and Florida), and the Indian Ocean (Mauritius, Tanzania and the Red Sea). Perhaps rooted in the Pacific, it may have been transported through the Indian Ocean to the Atlantic theatre. The first South African collections are those from Saldanha Bay, from where Barnard (1927) described this nudibranch as a new species, Aeolidiella saldanhensis. It was described again from South Africa, as another new species, Aeolidiella multicolor, by Macnae (1954). Gosliner and Griffiths (1981) established these and other synonymies and added additional South African records. The full South African range now extends from Saldanha Bay (west coast) to KwaZulu-Natal on the east coast. In South Africa, Anteaeolidiella indica feeds on the presumably native sea anemone Anthothoe chilensis (a species which itself may represent a complex or two or more taxa).
description: Published as part of Mead, A., Carlton, J. T., Griffiths, C. L. & Rius, M., 2011, Introduced and cryptogenic marine and estuarine species of South Africa, pp. 2463-2524 in Journal of Natural History 45 (39 - 40) on page 2495, DOI: 10.1080/00222933.2011.595836, http://zenodo.org/record/5204591
Learning how to see development faithfully from another’s point of view: An essay on the study of the development episteme and technology in the (post)colonial world
Creators: name: Kinell, Sara
Publisher: name: ETH Zurich
Year: 2024
Subjects: Development
(Socio)technical systems
Epistemologies
Institutions
Power relations
info:eu-repo/classification/ddc/900
History

description: How might we faithfully study power relationships and how they construct the development of technology in the (post)colonial world? In this essay, I first discuss visions of the development episteme, then how these visions are operationalized through international organizations and development aid, and finally suggest an analytical approach that may help us scrutinize and decompose hegemonic narratives that are used to justify these visions and initiatives. 

I propose the perspective of situated knowledges as a complementing lens to vernacular systems and technology-in-use for the study of everyday life practices with and in technological systems. When we “learn how to see faithfully from another’s point of view” (Haraway 1988: 583), I suggest that we are better equipped to envision the multitude of visions and meanings of global and local development.
On the Lorentz Transformations of Momentum and Energy
Creators: name: Toller, M.
Publisher: name: arXiv
Year: 2003
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Motivated by ultra-high-energy cosmic ray physics, we discuss all the possible alternatives to the familiar Lorentz transformations of the momentum and the energy of a particle. Starting from natural physical requirements, we exclude all the possibilities, apart from the ones which arise from the usual four-vector transformations by means of a change of coordinates in the mass-shell. This result confirms the remark, given in a preceding paper, that, in a theory without preferred inertial frames, one can always define a linearly transforming energy parameter to which the GZK cutoff argument can be applied. We also discuss the connections between the conservation and the transformation properties of energy-momentum and the relation between energy-momentum and velocity.
description: 13 pages, LATEX, some references added, some minor points clarified, text divided into sections
MOESM8 of Measuring early childhood development in multiple contexts: the internal factor structure and reliability of the early Human Capability Index in seven low and middle income countries
Creators: name: Sincovich, Alanna
name: Gregory, Tess
name: Zanon, Cristian
name: Santos, Daniel
name: Lynch, John
name: Brinkman, Sally
Publisher: name: figshare
Year: 2019
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Science Policy

description: Additional file 8: Table S8. Factor loadings from confirmatory factor analysis in China.
Dairy Farmer Policy Preferences
Creators: name: Wolf, Christopher A.
name: Tonsor, Glynn T.
name: Wolf, Christopher A.
name: Tonsor, Glynn T.
Publisher: name: Unknown
Year: 2013
Subjects: subject: Agricultural and Food Policy
subject: Livestock Production/Industries
subject: best-worst scaling
subject: dairy policy
subject: farm bill
subject: farmer preferences
subject: herd size

description: Dairy policy often becomes a contentious topic during U.S. farm bill negotiations. The dairy subtitle of the 2012 farm bill has been debated and discussed since 2009. This research uses best-worst scenario methods to analyze dairy farmer preferences for policy options, including eliminating existing dairy policies, implementing new dairy policies related to income support and growth management, and ending ethanol subsidies. Results indicate that large and small dairy herd operators have differing preferences. Large herd operators prefer to end ethanol subsidies rather than specific dairy policy changes, while small herd operators most preferred support for income over feed-cost margins.
Additional file 1 of Bilateral visual acuity decline in males with choroideremia: a pooled, cross-sectional meta-analysis
Creators: name: Bozkaya, Duygu
name: Zou, Heng
name: Lu, Cindy
name: Tsao, Nicole W.
name: Lam, Byron L.
Publisher: name: figshare
Year: 2022
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy

description: Additional file 1: Supplementary Table 1. Characteristics of Included Studiesa. Supplementary Table 2. Articles Excluded From Analysis. Supplementary Figure 1. PRISMA flowchart.
Additional file 1 of LncRNA ZFAS1 protects chondrocytes from IL-1β-induced apoptosis and extracellular matrix degradation via regulating miR-7-5p/FLRT2 axis
Creators: name: Han, Jicheng
name: Luo, Zongjian
name: Wang, Yifei
name: Liang, Yantao
Publisher: name: figshare
Year: 2023
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Science Policy

description: Additional file 1: Table S1. The sequences of oligonucleotides and primers
Ammotheidae Dohrn 1881
Creators: name: Mead, A.
name: Carlton, J. T.
name: Griffiths, C. L.
name: Rius, M.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Pycnogonida
Pantopoda
Ammotheidae

description: Family AMMOTHEIDAE   Ammothella appendiculata (Dohrn, 1881) Introduced (= Ammothella indica Stock, 1954)
 This sea spider was collected in the fouling of a ship’s hull in Durban Bay in 1951 where the vessel had been solely resident. It was first recorded by Stock (1954, 1959) as Ammothella indica, a species described from Singapore, and was synonymized with Ammothella appendiculata by Bamber (2000). The port-dwelling sea spiders of South Africa have not been resurveyed in recent decades, but we have no reason to suspect that Ammothella appendiculata no longer occurs in Durban Bay, and we retain it on the South African faunal list. Ammothella appendiculata was described from the Mediterranean, where it still occurs, but is otherwise patchily distributed around the Atlantic rim, being recorded, for example, outside the Mediterranean from the West Indies and Florida (Child 1974) and Brazil (Ribeiro et al. 1982). In contrast, largely under the name Ammothella indica, it is reported as widely distributed throughout the western Pacific Ocean (Bamber 2000), where it occurs in natural habitats (such as coral rubble) and where closely related endemic species occur (Child 1988). It also occurs in the Red Sea (Stock 1957), to where it may have been carried from the Mediterranean, or from the Pacific. We tentatively suggest that it may be native to the Pacific Ocean and is a nineteenth-century (or earlier) introduction to the Mediterranean and the Atlantic Ocean, with ship-fouling. Alternatively, Mediterranean–Atlantic stocks may represent distinct species, a question that is best approached genetically (R. Bamber, personal communication, 2009). It may have been introduced to South Africa in ship fouling or in ballast water.
description: Published as part of Mead, A., Carlton, J. T., Griffiths, C. L. & Rius, M., 2011, Introduced and cryptogenic marine and estuarine species of South Africa, pp. 2463-2524 in Journal of Natural History 45 (39 - 40) on page 2490, DOI: 10.1080/00222933.2011.595836, http://zenodo.org/record/5204591
Additional file 1 of Reducing the stigma surrounding opioid use disorder: evaluating an opioid overdose prevention training program applied to a diverse population
Creators: name: Bascou, Nicholas Alexander
name: Haslund-Gourley, Benjamin
name: Amber-Monta, Katrina
name: Samson, Kyle
name: Goss, Nathaniel
name: Meredith, Dakota
name: Friedman, Andrew
name: Needleman, Andrew
name: Kumar, Vishnu K.
name: Fischer, Bradford D.
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Pharmacology
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Science Policy

description: Additional file 1: Appendix 1. Outline of topics discussed in the OOART. The outline is divided into the seven sections that correspond to the PowerPoint presentation. The outline is not all encompassing but covers most topics formally discussed during each training session.
Revealed Demand for Country-of-Origin Labeling of Meat in the United States
Creators: name: Taylor, Mykel R.
name: Tonsor, Glynn T.
name: Taylor, Mykel R.
name: Tonsor, Glynn T.
Publisher: name: Unknown
Year: 2013
Subjects: subject: Food Consumption/Nutrition/Food Safety
subject: Food Security and Poverty
subject: International Relations/Trade
subject: Livestock Production/Industries
subject: country of origin
subject: MCOOL
subject: meat demand
subject: Rotterdam
subject: separability

description: Proponents of the U.S. mandatory country-of-origin labeling (MCOOL) law have argued that consumers prefer domestic meat and value labels confirming domestic origin. Following legislation enacted in March 2009, an ex post analysis of demand is possible to evaluate relative costs and benefits of MCOOL. This study uses retail grocery-store scanner data to estimate a Rotterdam demand model of meat products. The model results failed to detect changes in consumer meat demand post-MCOOL. Given the costs of compliance incurred by meat processors and no evidence of increased demand, our results suggest that producers and consumers have experienced a welfare loss.
Aphidius asteris Haliday 1834
Creators: name: Rakhshani, Ehsan
name: Tomanović, Željko
name: Starý, Petr
name: Kavallieratos, Nickolas G.
name: Ilić, Marijana
name: Stanković, Saša S.
name: Rajabi-Mazhar, Noorali
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Braconidae
Aphidius
Aphidius asteris

description: Aphidius asteris Haliday, 1834
(Figures 2C, 4C)
 Macrosiphoniella sp. – France (Le Cailar, 19 May 1986, Artemisia campestris, 8f 2m), Czech Republic (Karlštajn, 26 July 1960, Artemisia absinthii, 3f 6m).
description: Published as part of Rakhshani, Ehsan, Tomanović, Željko, Starý, Petr, Kavallieratos, Nickolas G., Ilić, Marijana, Stanković, Saša S. & Rajabi-Mazhar, Noorali, 2011, Aphidiinae parasitoids (Hymenoptera: Braconidae) of Macrosiphoniella aphids (Hemiptera: Aphididae) in the western Palaearctic region, pp. 2559-2575 in Journal of Natural History 45 (41 - 42) on page 2565, DOI: 10.1080/00222933.2011.597004, http://zenodo.org/record/5204627
Ex Ante Economic Impact Analysis of Novel Traits in Canola
Creators: name: Naseem, Anwar
name: Singla, Rohit
name: Naseem, Anwar
name: Singla, Rohit
Publisher: name: Unknown
Year: 2013
Subjects: subject: Crop Production/Industries
subject: Production Economics
subject: agricultural genomics
subject: canola
subject: molecular-assisted breeding
subject: surplus analysis
subject: trait evaluation

description: This study evaluates the potential economic impacts of ten novel traits in canola by employing a stochastic economic surplus model. Nitrogen use efficiency, water use efficiency, flea-beetle resistance, cold/freeze tolerance, and drought tolerance traits would have the largest economic impacts. Major beneficiaries of the surplus benefits are consumers as well as Canadian producers and innovators. The magnitudes of economic impacts varied substantially across the three major canola-growing Canadian provinces. Net benefits were sensitive to supply elasticity and R&D lags.
Notes on thermodynamics of super-entropic AdS black holes
Creators: name: Wu, Di
name: Wu, Puxun
name: Yu, Hongwei
name: Wu, Shuang-Qing
Publisher: name: arXiv
Year: 2019
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The super-entropic black hole, which possesses a noncompact horizon topology and violates the reverse isoperimetric inequality, has been found to satisfy both the thermodynamic first law and the Bekenstein-Smarr mass formula. In this paper, we first derive a new Christodoulou-Ruffini-like squared-mass formula for the four-dimensional Kerr-Newman-AdS super-entropic black hole, and then establish a set of very simple relations between thermodynamic quantities of the super-entropic Kerr-Newman-AdS$_4$ black hole and its usual counterparts. Using these relations, the thermodynamic quantities of the Kerr-Newman-AdS$_4$ super-entropic black hole can be obtained from those of the usual pro-type by taking the ultra-spinning limit properly. Then these relations are extended to the singly-rotating Kerr-AdS black holes in arbitrary dimensions and the double-rotating charged black hole in the five-dimensional minimal gauged supergravity. It can be inferred that the thermodynamic quantities of all super-entropic black holes obey similar limiting relations to those of their corresponding conventional rotating AdS black holes, and thus can be obtained by taking the ultra-spinning limit appropriately.
description: 14 pages; to appear in PRD
Greenhouse Gas Emissions Labeling for Produce: The Case of Biotech and Conventional Sweet Corn
Creators: name: Nalley, Lanier
name: Popp, Michael
name: Niederman, Z.
name: Thompson, Jada
name: Nalley, Lanier
name: Popp, Michael
name: Niederman, Z.
name: Thompson, Jada
Publisher: name: Unknown
Year: 2012
Subjects: subject: Crop Production/Industries
subject: Environmental Economics and Policy
subject: Research and Development/Tech Change/Emerging Technologies
subject: greenhouse gas emissions
subject: sweet corn
subject: agriculture
subject: biotechnology

description: Agriculture’s significant global contribution to greenhouse gas (GHG) emissions has spurred consumer and retailer mitigation interest. Biotechnology, designed to enhance the marketable portion of yield via improved disease, weed and pest management with the same or lower use of inputs, is thus well positioned to gain from producer and consumer concerns about GHG emissions. Compared to conventional sweet corn, identical lines embedded with insect control showed statistically significant higher marketable yield and no effect to lesser insecticide application. Pending seed cost and consumer acceptance of biotechnology, this should enhance returns for producers and allow marketing of multifold, consistent declines in GHG per ear.
Lysiphlebus confusus Tremblay and Eady 1978
Creators: name: Rakhshani, Ehsan
name: Tomanović, Željko
name: Starý, Petr
name: Kavallieratos, Nickolas G.
name: Ilić, Marijana
name: Stanković, Saša S.
name: Rajabi-Mazhar, Noorali
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Braconidae
Lysiphlebus
Lysiphlebus confusus

description: Lysiphlebus confusus Tremblay and Eady, 1978
(Figure 2G)
 Macrosiphoniella pulvera (Walker) – France (Starý 1974); M. tapuskae (Hottes and Frison) – Iran (Starý 1979; Starý et al. 2000).
description: Published as part of Rakhshani, Ehsan, Tomanović, Željko, Starý, Petr, Kavallieratos, Nickolas G., Ilić, Marijana, Stanković, Saša S. & Rajabi-Mazhar, Noorali, 2011, Aphidiinae parasitoids (Hymenoptera: Braconidae) of Macrosiphoniella aphids (Hemiptera: Aphididae) in the western Palaearctic region, pp. 2559-2575 in Journal of Natural History 45 (41 - 42) on page 2569, DOI: 10.1080/00222933.2011.597004, http://zenodo.org/record/5204627
Designing for Problem-Solving prior to Instruction in University Classrooms to Enhance Student Engagement
Creators: name: Tobler, Samuel
name: Kapur, Manu
Publisher: name: ETH Zurich
Year: 2024

description: Designing the lecture contents according to the latest trends in the learning sciences, we systematically strived to preface any instruction with a problem-solving phase in which the students were involved in historically foundational or contemporarily relevant research topics circling how (academically) failing cognitively and affectively impacts learning.
Thus, combining the nature of research with scientific literature through relevant scholarly articles built the foundation of the course's theoretical aspects. Yet, instead of directly presenting the results, the student's active participation shaped the core of the classes. The students had to discuss findings, generate hypotheses, participate in in-class experiments, and plan their studies. Overall, this resulted in a large portion of time allocated to constructive debates and students interacting with their colleagues with only passive support from the lecturer. To achieve this, we developed three main modes for implementing diverse problem- solving opportunities.
MOESM5 of Measuring early childhood development in multiple contexts: the internal factor structure and reliability of the early Human Capability Index in seven low and middle income countries
Creators: name: Sincovich, Alanna
name: Gregory, Tess
name: Zanon, Cristian
name: Santos, Daniel
name: Lynch, John
name: Brinkman, Sally
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Science Policy

description: Additional file 5: Table S5. Samoa eHCI items and n (%) children for whom their caregiver/ teacher reported yes/able.
Energy and Employment Implications of Foreign Trade Opportunities in the Northeast
Creators: name: Alba, Pedro
name: Blandford, David
name: Boisvert, Richard N.
name: Alba, Pedro
name: Blandford, David
name: Boisvert, Richard N.
Publisher: name: Unknown
Year: 1981
Subjects: International Relations/Trade
Labor and Human Capital

description: In the Northeast, the principal market expansion for its manufactured products is likely to come from outside. Sales to export markets can create jobs and could potentially exacerbate the region's dependence on imported energy. 'Ibis analysis demonstrates that 26% of the Northeast's manufacturing employment is in sectors which have experienced significant expansion in exports in recent years. For most of the export sectors, the employment contribution is above the average for domestically-oriented industries, and the energy requirement is below the average. By focusing export promotion policies on these sectors, employment objectives need not conflict with energy conservation objectives.
Structures in BC_N Ruijsenaars-Schneider models
Creators: name: Avan, J.
name: Rollet, G.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Exactly Solvable and Integrable Systems (nlin.SI)
subject: High Energy Physics - Theory (hep-th)
subject: Quantum Algebra (math.QA)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: We construct the classical r-matrix structure for the Lax formulation of BC_N Ruijsenaars-Schneider systems proposed in hep-th 0006004. The r-matrix structure takes a quadratic form similar to the A_N Ruijsenaars-Schneider Poisson bracket behavior, although the dynamical dependence is more complicated. Commuting Hamiltonians stemming from the BC_N Ruijsenaars-Schneider Lax matrix are shown to be linear combinations of particular Koornwinder-van Diejen ``external fields'' Ruijsenaars-Schneider models, for specific values of the exponential one-body couplings. Uniqueness of such commuting Hamiltonians is established once the first of them and the general analytic structure are given.
description: 18 pages, gzip latex file
The Orevkov invariant of an affine plane curve
Creators: name: Neumann, Walter D.
name: Norbury, Paul
Publisher: name: arXiv
Year: 2001
Subjects: subject: Algebraic Geometry (math.AG)
subject: FOS: Mathematics
subject: 14H30, 14R10, 57M25

description: We show that although the fundamental group of the complement of an algebraic affine plane curve is not easy to compute, it possesses a more accessible quotient, which we call the Orevkov invariant.
description: 20 pages
Additional file 1 of Reporting methodological issues of the mendelian randomization studies in health and medical research: a systematic review
Creators: name: Islam, Shabab Noor
name: Ahammed, Tanvir
name: Anjum, Aniqua
name: Albalawi, Olayan
name: Uddin, Md. Jamal
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Biotechnology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy

description: Additional file 1.
MOESM6 of Measuring early childhood development in multiple contexts: the internal factor structure and reliability of the early Human Capability Index in seven low and middle income countries
Creators: name: Sincovich, Alanna
name: Gregory, Tess
name: Zanon, Cristian
name: Santos, Daniel
name: Lynch, John
name: Brinkman, Sally
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Science Policy

description: Additional file 6: Table S6. Tuvalu eHCI items and n (%) children for whom their caregiver/ teacher reported yes/able.
Neutrino Oscillations and the Early Universe
Creators: name: Kirilova, D. P.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: The observational and theoretical status of neutrino oscillations in connection with solar and atmospheric neutrino anomalies is presented in brief. The effect of neutrino oscillations on the early Universe evolution is discussed in detail. A short review is given of the standard Big Bang Nucleosynthesis and the influence of resonant and nonresonant neutrino oscillations on active neutrinos and on primordial nucleosynthesis of He-4. BBN cosmological constraints on neutrino oscillation parameters are discussed.
description: 21 p., 6 figures, a review based on raview talk at NCYA Conference and a presentation at CAPP2003
Additional file 1 of Peripheral magnetic theta burst stimulation to muscles can effectively reduce spasticity: a randomized controlled trial
Creators: name: El Nahas, Nevine
name: Kenawy, Fatma Fathalla
name: Abd Eldayem, Eman Hamid
name: Roushdy, Tamer M.
name: Helmy, Shahinaz M.
name: Akl, Ahmed Zaki
name: Ashour, Aya Ahmed
name: Emara, Tamer H.
name: Moawad, Marwa Mohamed
name: Amin, Randa M.
name: Elbokl, Ahmed M.
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: Computational Biology

description: Additional file 1. CONSORT flow diagram.
Attempts for improving protocol to phenotype olive cultivars responses to Xylella fastidiosa infections
Creators: name: Giuliana, Loconsole
name: Giuseppe, Altamura
name: Vincenzo, Cavalieri
name: Maria, Saponari
Publisher: name: Zenodo
Year: 2021
Subjects: subject: plant health
subject: xylella
subject: rooted and grafted olive plants
subject: symptoms
subject: http://id.agrisemantics.org/gacs/C20262
subject: http://id.agrisemantics.org/gacs/C569
subject: http://id.agrisemantics.org/gacs/C7502

description: The incubation period of Xylella fastidiosa (Xf) in olive could last as long as >1 year, even in the case of the highly pathogenic Xf subsp. pauca, ST53. Such long latency period is a major constrain when performing large screening program for searching potential resistant olive genotypes. In this work, we compared the incubation period of the infections on 9 grafted and self-rooted plants of the cultivar Cellina di Nardò. Plants were inoculated by caging on each plant, 10 specimens of Philaneus spumarius previously confined for bacterial acquisition on field-infected trees. Plants were maintained under controlled conditions and monthly sampled. One-month post-inoculation (pi), Xf was detected in 1 grafted and 1 self-rooted plant. Six-months pi, 5 self-rooted plants and all 9 grafted plants were positive. One-year pi, 7 out 9 self-rooted plants tested positive, while 2 remained negative.
 Initial symptoms (defoliation of the apical shoots) started to appear 5-months pi on 1 grafted plant, and then progressed with all grafted plants exhibiting symptoms within 8 months pi.
 Symptoms on the infected self-rooted plants were delayed compared to the grafted plants: initial symptoms appeared 8-months pi on 2 plants, and only at 15-months pi the remaining infected plants showed symptoms. The delayed appearance of the symptoms (approx. 6 months) correlated with a lower symptom severity on self-rooted plants. Interestingly, the roots of grafted plants harboured a higher bacterial population size then self-rooted plants.
 The results of this experiment showed that: (i) vector-mediated transmission is an efficient mean for the inoculation of olive plants; (ii) the use of grafted plants may reduce the latency period in olive; (iii) the bacterium in olives successfully colonize the roots. Nevertheless, the differential plant response recorded in our experiment, once validated in field conditions, may provide useful indications when realizing new olive plantations in the infected area.
description: IT; PPT; giuliana.loconsole@ipsp.cnr.it
Designing a new spatial light modulator for holographic photostimulation
Creators: name: Shane, Janelle C
name: McKnight, Douglas J
name: Hill, Adrian
name: Taberski, Kevin
name: Serati, Steve
Publisher: name: arXiv
Year: 2019
Subjects: subject: Instrumentation and Detectors (physics.ins-det)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Driven by the demands for speed and field of view in the holographic photostimulation community, we designed, built, and tested a liquid crystal on silicon (LCoS) spatial light modulator (SLM) with a 1536x1536 square pixel array and high-voltage LC drive. We discuss some of the engineering work that made the MacroSLM possible, including the custom FPGA board for handling huge data rates, the large pixel size for minimizing rolloff and crosstalk, and the temperature control to handle heating effects from the high-voltage controls and high-power laser illumination. We also designed an FPGA implementation of the overdrive method for increasing liquid crystal switching speed, allowing us to overcome the significant data bottlenecks that limit frame rates for large arrays. We demonstrate 500 Hz hologram-to-hologram speed at 1064 nm operating wavelength, and discuss the new science that these speeds and array sizes have enabled.
description: preprint of SPIE San Diego 2019 proceedings paper updated with minor edits including additional references and margin adjustments
Broth media cultivation of xylem microbiome from cultivated olive trees.
Creators: name: Manuel, Anguita-Maeso
name: Olivares-García Concepción
name: Rivas Juan Carlos
name: Navas-Cortes Juan, A.
name: Landa Blanca, B.
Publisher: name: Zenodo
Year: 2021
Subjects: subject: plant health
subject: xylella
subject: http://id.agrisemantics.org/gacs/C20262
subject: http://id.agrisemantics.org/gacs/C5757
subject: http://id.agrisemantics.org/gacs/C3738

description: Nowadays there is no culture media described for axenic growth of olive xylem microbiome which can be essential to understand the ecological interactions of xylem-inhabiting pathogens. This work focused on the study of culture media of defined composition to sustain growth of xylem-inhabiting microorganisms. Xylem sap extracted with a Scholander pressure chamber from two olive cultivars were inoculated in SMX, XVM2, XF26, PD3, 3G10R and XDM2 liquid culture media for two weeks at 28°C. The increase in absorbance was measured daily and aliquots were sampled every two days to analyze changes in bacterial composition by Illumina MiSeq metagenomic analysis. Globally, the most abundant genus of culturable bacteria was Massilia (21.25%), followed by Sphingomonas (20.54%), Curtobacterium (9.80%), Pseudomonas (7.51%) and Frigoribacterium (7.12%), although there were substantial differences in microbial communities over time and among culture media. Thus, SMX and XF26 displayed the highest bacterial OTU richness variation on time (33-9 and 30-6, respectively), followed by XVM2 (29-11), XDM2 (25-9), 3G10R (19-9) and PD3 (9-6). Currently, we have evaluated the possibility to modify the xylem microbiome composition of olive seedlings by transplanting a microbiome artificially cultured in liquid media by an endotherapy treatment and monitored the stability of this modification over time. Results indicated that consortia of xylem microorganisms can be cultivated in vitro using predefined culture media, and that those can artificially introduced in xylem vessels of seedling plants modifying their native xylem microbiome. This technique, when optimized, can settle the basis to inoculate ad-hoc selected microorganisms with the aim to control diseases caused by xylem inhabiting pathogens such as Xylella fastidiosa or modify olive plant physiology and growth. Research financially supported by Projects XF-ACTORS 727987 (EU-H2020) and AGL2016-75606-R (MICINN Spain and FEDER-EU).
description: ES; PPT; blanca.landa@ias.csic.es
Praon unitum Mescheloff and Rosen 1988
Creators: name: Rakhshani, Ehsan
name: Tomanović, Željko
name: Starý, Petr
name: Kavallieratos, Nickolas G.
name: Ilić, Marijana
name: Stanković, Saša S.
name: Rajabi-Mazhar, Noorali
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Braconidae
Praon
Praon unitum

description: Praon unitum Mescheloff and Rosen, 1988
(Figures 2J, 5H)
 Macrosiphoniella sanborni (Gillette) – Israel (Mescheloff and Rosen 1988).
description: Published as part of Rakhshani, Ehsan, Tomanović, Željko, Starý, Petr, Kavallieratos, Nickolas G., Ilić, Marijana, Stanković, Saša S. & Rajabi-Mazhar, Noorali, 2011, Aphidiinae parasitoids (Hymenoptera: Braconidae) of Macrosiphoniella aphids (Hemiptera: Aphididae) in the western Palaearctic region, pp. 2559-2575 in Journal of Natural History 45 (41 - 42) on page 2570, DOI: 10.1080/00222933.2011.597004, http://zenodo.org/record/5204627