cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
sj-docx-1-ict-10.1177_15347354231191701 – Supplemental material for Virtual Delivery of Stepped-Care Cognitive Behaviour Therapy for Cancer Related Fatigue: A Feasibility Study
Creators: name: Williams, Lauren K.
name: Ftanou, Maria
name: Pearson, Elizabeth J.
Publisher: name: SAGE Journals
Year: 2023
Subjects: Health and Community Services
Endocrinology
Oncology and Carcinogenesis not elsewhere classified
Aged Health Care

description: Supplemental material, sj-docx-1-ict-10.1177_15347354231191701 for Virtual Delivery of Stepped-Care Cognitive Behaviour Therapy for Cancer Related Fatigue: A Feasibility Study by Lauren K. Williams, Maria Ftanou and Elizabeth J. Pearson in Integrative Cancer Therapies
A proposito di Il borghese e Il borghese fa il mondo
Creators: name: Villari, Enrica
Publisher: name: Università degli Studi di Cagliari
Year: 2018
Subjects: Il borghese fa il mondo; Il borghese. Tra storia e letteratura; Franco Moretti; Barry Lyndon; Thackeray

description: Questa è una occasione speciale non solo perché si parla qui di due libri non comuni, ma soprattutto perché la relazione tra questi due libri è una relazione fondamentale per ogni studioso di letteratura. È la relazione vitale tra un testo di critica con una forte ipotesi metodologica e teorica da una parte, e una ampia raccolta di saggi messi insieme con l’intento di illustrare innanzitutto come una ipotesi di metodo può aprire nuove prospettive sul modo in cui guardiamo ai testi, magari trovandovi così qualcosa che in precedenti letture non avevamo visto.
description: Between, Vol 8, No 15 (2018): Spaced Out. Spatiality in Comics
Speech Artifact Removal from EEG Recordings of Spoken Word Production with Tensor Decomposition
Creators: name: Lovenia, Holy
name: Tanaka, Hiroki
name: Sakti, Sakriani
name: Purwarianti, Ayu
name: Nakamura, Satoshi
Publisher: name: arXiv
Year: 2022
Subjects: subject: Sound (cs.SD)
subject: Artificial Intelligence (cs.AI)
subject: Audio and Speech Processing (eess.AS)
subject: FOS: Computer and information sciences
subject: FOS: Electrical engineering, electronic engineering, information engineering

description: Research about brain activities involving spoken word production is considerably underdeveloped because of the undiscovered characteristics of speech artifacts, which contaminate electroencephalogram (EEG) signals and prevent the inspection of the underlying cognitive processes. To fuel further EEG research with speech production, a method using three-mode tensor decomposition (time x space x frequency) is proposed to perform speech artifact removal. Tensor decomposition enables simultaneous inspection of multiple modes, which suits the multi-way nature of EEG data. In a picture-naming task, we collected raw data with speech artifacts by placing two electrodes near the mouth to record lip EMG. Based on our evaluation, which calculated the correlation values between grand-averaged speech artifacts and the lip EMG, tensor decomposition outperformed the former methods that were based on independent component analysis (ICA) and blind source separation (BSS), both in detecting speech artifact (0.985) and producing clean data (0.101). Our proposed method correctly preserved the components unrelated to speech, which was validated by computing the correlation value between the grand-averaged raw data without EOG and cleaned data before the speech onset (0.92-0.94).
55697: Overgrown Trenches
Creators: name: Project Team, First World War Poetry Digital Archive
Publisher: name: University of Oxford
Year: 2024
Subjects: classificationCode: 430304
subject: British history
classificationCode: 430308
subject: European history (excl. British, classical Greek and Roman)
classificationCode: 430316
subject: International history

description: View of grass grown over trenches.
THE HISTORY OF ORIGIN OF DRABBLES  UZBEK AND ENGLISH  LITERATURE
Creators: name: Kosimova, Azizakhon
Publisher: name: Zenodo
Year: 2024

description: In Uzbek and English literature, drabbles are a relatively new genre in modern literature. This article discusses the significance, purpose, and history of this genre. We all know that the study of literature is a fascinating and expanding field. As a result, there have been numerous advancements and changes in this field. It can be asserted that the development of drabbles is not an ancient history. The article focuses on deep an analysis of drabbles, which are short stories of less than 100 words that date back to 1980. According to the analysis of drabbles in both languages’ literature, drabbles originated in English literature, moved to Uzbek literature, and still evolving today. The drabble genre demands more effort from the writer due to its intricacy compared to the narrative genre. The reason is that a writer only needs story writing skill to convey a story in just 100 words. Nevertheless, well-known authors of stories in both Uzbek and English eventually experimented with drabble and gained success.  In addition, this article examines well-known drabble authors and their creations.
Supplemental Material - Changes in Perceptions of Border Security Influence Desired Levels of Immigration
Creators: name: Briggs, Ryan C.
name: Solodoch, Omer
Publisher: name: SAGE Journals
Year: 2023
Subjects: Human Rights and Justice Issues
International Relations

description: Supplemental Material for Changes in Perceptions of Border Security Influence Desired Levels of Immigration by Ryan C. Briggs and Omer Solodoch in Journal of Conflict Resolution
An extraction method for mobility degradation and contact resistance of graphene transistors
Creators: name: Pacheco-Sanchez, Anibal
name: Mavredakis, Nikolaos
name: Feijoo, Pedro C.
name: Jiménez, David
Publisher: name: arXiv
Year: 2022
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Applied Physics (physics.app-ph)
subject: FOS: Physical sciences

description: The intrinsic mobility degradation coefficient, contact resistance and the transconductance parameter of graphene field-effect transistors (GFETs) are extracted for different technologies by considering a novel transport model embracing mobility degradation effects within the charge channel control description. By considering the mobility degradation-based model, a straightforward extraction methodology, not provided before, is enabled by applying the concept of the well-known Y-function to the \textit{I-V} device characteristics. The method works regardless the gate device architecture. An accurate description of experimental data of fabricated devices is achieved with the underlying transport equation by using the extracted parameters. An evaluation of the channel resistance, enabled by the extracted parameters here, has been also provided.
Supplemental Material - Couple healing from infidelity: A grounded theory study
Creators: name: Fife, Stephen T.
name: Gossner, Jacob D.
name: Theobald, Alex
name: Allen, Emma
name: Rivero, Ariana
name: Koehl, Heather
Publisher: name: SAGE Journals
Year: 2023
Subjects: Communication and Media Studies not elsewhere classified
Psychology not elsewhere classified

description: Supplemental Material for Couple healing from infidelity: A grounded theory study by Stephen T. Fife, Jacob D. Gossner, Alex Theobald, Emma Allen, Ariana Rivero and Heather Koehl in Journal of Social and Personal Relationships
sj-pdf-1-wso-10.1177_17474930231189395 – Supplemental material for IMPETUS Stroke: Assessment of hospital infrastructure and workflow for implementation of uniform stroke care pathway in India
Creators: name: Salunkhe, Manish
name: Haldar, Partha
name: Bhatia, Rohit
name: Prasad, Deepshikha
name: Gupta, Shweta
name: Srivastava, M V Padma
name: Bhoi, Sanjeev
name: Jha, Menka
name: Samal, Priyanka
name: Panda, Samhita
name: Anand, Sucharita
name: Kumar, Niraj
name: Tiwari, Ashutosh
name: Gopi, S
name: Raju, Garuda Butchi
name: Garg, Jyoti
name: Chawla, M P S
name: Ray, Biman Kanti
name: Bhardwaj, Amit
name: Verma, Alok
name: Dongre, Nikhil
name: Chhina, Gurpreet
name: Sibia, Raminder
name: Kaur, Rupinderjeet
name: Zanzmera, Paresh
name: Iype, Thomas
name: Garg, Ravinder
name: Kumar, Ashok
name: Ranjan, Abhay
name: Sardana, Vijay
name: Maheshwari, Dilip
name: Bhushan, Bharat
name: Saluja, Alvee
name: Darole, Pramod
name: Bala, Kiran
name: Dabla, Surekha
name: Puri, Inder
name: Shah, Shalin
name: Ranga, Gajender Singh
name: Nath, Smita
name: Chandan, Shishir
name: Malik, Rupali
Publisher: name: SAGE Journals
Year: 2023
Subjects: subject: Cardiology
subject: Medicine
subject: Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine

description: Supplemental material, sj-pdf-1-wso-10.1177_17474930231189395 for IMPETUS Stroke: Assessment of hospital infrastructure and workflow for implementation of uniform stroke care pathway in India by Manish Salunkhe, Partha Haldar, Rohit Bhatia, Deepshikha Prasad, Shweta Gupta, M V Padma Srivastava, Sanjeev Bhoi, Menka Jha, Priyanka Samal, Samhita Panda, Sucharita Anand, Niraj Kumar, Ashutosh Tiwari, S Gopi, Garuda Butchi Raju, Jyoti Garg, M P S Chawla, Biman Kanti Ray, Amit Bhardwaj, Alok Verma, Nikhil Dongre, Gurpreet Chhina, Raminder Sibia, Rupinderjeet Kaur, Paresh Zanzmera, Thomas Iype, Sulena, Ravinder Garg, Ashok Kumar, Abhay Ranjan, Vijay Sardana, Dilip Maheshwari, Bharat Bhushan, Alvee Saluja, Pramod Darole, Kiran Bala, Surekha Dabla, Inder Puri, Shalin Shah, Gajender Singh Ranga, Smita Nath, Shishir Chandan and Rupali Malik in International Journal of Stroke
sj-pdf-1-mdm-10.1177_0272989X231191127 – Supplemental material for Health Economic Analysis of Antiviral Drugs in the Global Polio Eradication Endgame
Creators: name: Badizadegan, Kamran
name: Kalkowska, Dominika A.
name: Thompson, Kimberly M.
Publisher: name: SAGE Journals
Year: 2023
Subjects: Health and Community Services
Public Health and Health Services not elsewhere classified
Sociological Methodology and Research Methods

description: Supplemental material, sj-pdf-1-mdm-10.1177_0272989X231191127 for Health Economic Analysis of Antiviral Drugs in the Global Polio Eradication Endgame by Kamran Badizadegan, Dominika A. Kalkowska and Kimberly M. Thompson in Medical Decision Making
Superconductor-insulator duality for the array of Josephson wires
Creators: name: Protopopov, I. V.
name: Feigel'man, M. V.
Publisher: name: arXiv
Year: 2007
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We propose novel model system for the studies of superconductor-insulator transitions, which is a regular lattice, whose each link consists of Josephson-junction chain of $N \gg 1$ junctions in sequence. The theory of such an array is developed for the case of semiclassical junctions with the Josephson energy $E_J$ large compared to the junctions's Coulomb energy $E_C$. Exact duality transformation is derived, which transforms the Hamiltonian of the proposed model into a standard Hamiltonian of JJ array. The nature of the ground state is controlled (in the absence of random offset charges) by the parameter $q \approx N^2 \exp(-\sqrt{8E_J/E_C})$, with superconductive state corresponding to small $q < q_c $. The values of $q_c$ are calculated for magnetic frustrations $f= 0$ and $f= \frac12$. Temperature of superconductive transition $T_c(q)$ and $q < q_c$ is estimated for the same values of $f$. In presence of strong random offset charges, the T=0 phase diagram is controlled by the parameter $\bar{q} = q/\sqrt{N}$; we estimated critical value $\bar{q}_c$.
description: 5 pages, 2 figures
sj-pdf-4-tmj-10.1177_03008916231189532 – Supplemental material for Periprosthetic effusions surrounding breast expander: a flow cytometric, immunohistochemical and molecular characterization
Creators: name: Sala, Laura
name: Ciniselli, Chiara Maura
name: Bozzi, Fabio
name: Summo, Valeria
name: Bonini, Chiara
name: Brich, Silvia
name: Bertolotti, Alessia
name: Viola, Trupia Desiré
name: Volpi, Chiara Costanza
name: Pizzamiglio, Sara
name: Paolini, Biagio
name: Aiello, Antonella
name: Apolone, Giovanni
name: Verderio, Paolo
name: Cortinovis, Umberto
Publisher: name: SAGE Journals
Year: 2023
Subjects: Medicine

description: Supplemental material, sj-pdf-4-tmj-10.1177_03008916231189532 for Periprosthetic effusions surrounding breast expander: a flow cytometric, immunohistochemical and molecular characterization by Laura Sala, Chiara Maura Ciniselli, Fabio Bozzi, Valeria Summo, Chiara Bonini, Silvia Brich, Alessia Bertolotti, Trupia Desiré Viola, Chiara Costanza Volpi, Sara Pizzamiglio, Biagio Paolini, Antonella Aiello, Giovanni Apolone, Paolo Verderio and Umberto Cortinovis in Tumori Journal
sj-pdf-9-tmj-10.1177_03008916231189532 – Supplemental material for Periprosthetic effusions surrounding breast expander: a flow cytometric, immunohistochemical and molecular characterization
Creators: name: Sala, Laura
name: Ciniselli, Chiara Maura
name: Bozzi, Fabio
name: Summo, Valeria
name: Bonini, Chiara
name: Brich, Silvia
name: Bertolotti, Alessia
name: Viola, Trupia Desiré
name: Volpi, Chiara Costanza
name: Pizzamiglio, Sara
name: Paolini, Biagio
name: Aiello, Antonella
name: Apolone, Giovanni
name: Verderio, Paolo
name: Cortinovis, Umberto
Publisher: name: SAGE Journals
Year: 2023
Subjects: Medicine

description: Supplemental material, sj-pdf-9-tmj-10.1177_03008916231189532 for Periprosthetic effusions surrounding breast expander: a flow cytometric, immunohistochemical and molecular characterization by Laura Sala, Chiara Maura Ciniselli, Fabio Bozzi, Valeria Summo, Chiara Bonini, Silvia Brich, Alessia Bertolotti, Trupia Desiré Viola, Chiara Costanza Volpi, Sara Pizzamiglio, Biagio Paolini, Antonella Aiello, Giovanni Apolone, Paolo Verderio and Umberto Cortinovis in Tumori Journal
Additional file 1 of Development of Novel KASP Markers for Improved Germination in Deep-Sown Direct Seeded Rice
Creators: name: Sandhu, Nitika
name: Singh, Jasneet
name: Ankush, Ade Pooja
name: Augustine, Gaurav
name: Raigar, Om Prakash
name: Verma, Vikas Kumar
name: Pruthi, Gomsie
name: Kumar, Arvind
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1: Table S1. The detailed information on the number of plants from each cross used to validate the KASP assay. Table S2. Summary of the whole genome resequencing data. Chromosome wise distribution and mapping statistics of diverse rice accessions used in this study. Table S3. The detailed information on the genomic location of validated KASP markers within the MSUv7 gene models ( http://rice.plantbiology.msu.edu ). Table S4. The R2 and p value calculated using single marker analysis in WinQTLCart V2.5 (Wang et al. 2012) of the selected 12 KASP assays.
Convergence of Achlioptas processes via differential equations with unique solutions
Creators: name: Riordan, Oliver
name: Warnke, Lutz
Publisher: name: arXiv
Year: 2011
Subjects: subject: Probability (math.PR)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Combinatorics (math.CO)
subject: FOS: Mathematics
subject: FOS: Physical sciences
subject: 60C05, 05C80

description: In Achlioptas processes, starting from an empty graph, in each step two potential edges are chosen uniformly at random, and using some rule one of them is selected and added to the evolving graph. The evolution of the rescaled size of the largest component in such variations of the Erdős--Rényi random graph process has recently received considerable attention, in particular for for Bollobás's `product rule'. In this paper we establish the following result for rules such as the product rule: the limit of the rescaled size of the `giant' component exists and is continuous provided that a certain system of differential equations has a unique solution. In fact, our result applies to a very large class of Achlioptas-like processes. Our proof relies on a general idea which relates the evolution of stochastic processes to an associated system of differential equations. Provided that the latter has a unique solution, our approach shows that certain discrete quantities converge (after appropriate rescaling) to this solution.
description: 18 pages. Revised and expanded version
sj-docx-1-rea-10.1177_17470161231191247 – Supplemental material for Stakeholders’ experiences of ethical challenges in cluster randomized trials in a limited resource setting: a qualitative analysis
Creators: name: Mtande, Tiwonge K
name: Lombard, Carl
name: Nair, Gonasagrie
name: Rennie, Stuart
Publisher: name: SAGE Journals
Year: 2023
Subjects: Sociological Methodology and Research Methods

description: Supplemental material, sj-docx-1-rea-10.1177_17470161231191247 for Stakeholders’ experiences of ethical challenges in cluster randomized trials in a limited resource setting: a qualitative analysis by Tiwonge K Mtande, Carl Lombard, Gonasagrie Nair and Stuart Rennie in Research Ethics
On the method of typical bounded differences
Creators: name: Warnke, Lutz
Publisher: name: arXiv
Year: 2012
Subjects: subject: Combinatorics (math.CO)
subject: Discrete Mathematics (cs.DM)
subject: Probability (math.PR)
subject: FOS: Mathematics
subject: FOS: Computer and information sciences
subject: 60C05 (Primary) 60F10, 60B99 (Secondary)

description: Concentration inequalities are fundamental tools in probabilistic combinatorics and theoretical computer science for proving that random functions are near their means. Of particular importance is the case where f(X) is a function of independent random variables X=(X_1, ..., X_n). Here the well known bounded differences inequality (also called McDiarmid's or Hoeffding-Azuma inequality) establishes sharp concentration if the function f does not depend too much on any of the variables. One attractive feature is that it relies on a very simple Lipschitz condition (L): it suffices to show that |f(X)-f(X')| \leq c_k whenever X,X' differ only in X_k. While this is easy to check, the main disadvantage is that it considers worst-case changes c_k, which often makes the resulting bounds too weak to be useful. In this paper we prove a variant of the bounded differences inequality which can be used to establish concentration of functions f(X) where (i) the typical changes are small although (ii) the worst case changes might be very large. One key aspect of this inequality is that it relies on a simple condition that (a) is easy to check and (b) coincides with heuristic considerations why concentration should hold. Indeed, given an event Γthat holds with very high probability, we essentially relax the Lipschitz condition (L) to situations where Γoccurs. The point is that the resulting typical changes c_k are often much smaller than the worst case ones. To illustrate its application we consider the reverse H-free process, where H is 2-balanced. We prove that the final number of edges in this process is concentrated, and also determine its likely value up to constant factors. This answers a question of Bollobás and Erdős.
description: 25 pages
Photon propagation in slowly varying inhomogeneous electromagnetic fields
Creators: name: Karbstein, Felix
name: Shaisultanov, Rashid
Publisher: name: arXiv
Year: 2015
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Theory (hep-th)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Starting from the Heisenberg-Euler effective Lagrangian, we determine the photon current and photon polarization tensor in inhomogeneous, slowly varying electromagnetic fields. To this end, we consider background field configurations varying in both space and time, paying special attention to the tensor structure. As a main result, we obtain compact analytical expressions for the photon polarization tensor in realistic Gaussian laser pulses, as generated in the focal spots of high-intensity lasers. These expressions are of utmost importance for the investigation of quantum vacuum nonlinearities in realistic high-intensity laser experiments.
description: 15 pages, 1 figure; typo fixed in first line of Eq. (12)
Topological Phenomena in Classical Optical Networks
Creators: name: Shi, T.
name: Kimble, H. J.
name: Cirac, J. I.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Quantum Physics (quant-ph)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: We propose a scheme to realize a topological insulator with optical-passive elements, and analyze the effects of Kerr-nonlinearities in its topological behavior. In the linear regime, our design gives rise to an optical spectrum with topological features and where the bandwidths and bandgaps are dramatically broadened. The resulting edge modes cover a very wide frequency range. We relate this behavior to the fact that the effective Hamiltonian describing the system's amplitudes is long-range. We also develop a method to analyze the scheme in the presence of a Kerr medium. We assess robustness and stability of the topological features, and predict the presence of chiral squeezed fluctuations at the edges in some parameter regimes.
description: 18 pages, 9 figures
Ultrafast fluorescent decay induced by metal-mediated dipole-dipole interaction in two-dimensional molecular aggregates
Creators: name: Hu, Qing
name: Jin, Dafei
name: Nam, Sang Hoon
name: Xiao, Jun
name: Liu, Yongmin
name: Zhang, Xiang
name: Fang, Nicholas X.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Optics (physics.optics)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Materials Science (cond-mat.mtrl-sci)
subject: Atomic and Molecular Clusters (physics.atm-clus)
subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: Two-dimensional molecular aggregate (2DMA), a thin sheet of strongly interacting dipole molecules self-assembled at close distance on an ordered lattice, is a fascinating fluorescent material. It is distinctively different from the single or colloidal dye molecules or quantum dots in most previous research. In this paper, we verify for the first time that when a 2DMA is placed at a nanometric distance from a metallic substrate, the strong and coherent interaction between the dipoles inside the 2DMA dominates its fluorescent decay at picosecond timescale. Our streak-camera lifetime measurement and interacting lattice-dipole calculation reveal that the metal-mediated dipole-dipole interaction shortens the fluorescent lifetime to about one half and increases the energy dissipation rate by ten times than expected from the noninteracting single-dipole picture. Our finding can enrich our understanding of nanoscale energy transfer in molecular excitonic systems and may designate a new direction for developing fast and efficient optoelectronic devices.
description: 9 pages, 6 figures
Additional file 1 of Turning the tide: understanding estuarine detection range variability via structural equation models
Creators: name: Bruneel, Stijn
name: Goossens, Jolien
name: Reubens, Jan
name: Pauwels, Ine
name: Moens, Tom
name: Goethals, Peter
name: Verhelst, Pieterjan
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified

description: Additional file 1: Additional figures and tables.
Supplemental Material - Does Institutional Quality Matter for Foreign Direct Investment and Human Development?
Creators: name: Thi Cam Ha, Van
name: Doan, Tinh
name: Holmes, Mark J.
name: Tran, Tuyen Quang
Publisher: name: SAGE Journals
Year: 2023
Subjects: Sociological Methodology and Research Methods

description: Supplemental Material for Does Institutional Quality Matter for Foreign Direct Investment and Human Development? by Van Thi Cam Ha, Tinh Doan, Mark J. Holmes, and Tuyen Quang Tran in Evaluation Review
1 Brief an H[ans] Georg Nägeli
Brief an Nägeli ...
Creators: name: Härtel, Gottfried Christoph
Publisher: name: [s.n.]
Year: 1820

description: von G[ottfried] C[hristoph] Härtel
description: Tagesangabe durch Ausriss nicht mehr lesbar, vollständiges Datum von späterer Hand am oberen Seitenrand notiert
Optimal Deployment of Resources for Maximizing Impact in Spreading Processes
Creators: name: Lokhov, Andrey Y.
name: Saad, David
Publisher: name: arXiv
Year: 2016
Subjects: subject: Social and Information Networks (cs.SI)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Physics and Society (physics.soc-ph)
subject: FOS: Computer and information sciences
subject: FOS: Physical sciences

description: The effective use of limited resources for controlling spreading processes on networks is of prime significance in diverse contexts, ranging from the identification of "influential spreaders" for maximizing information dissemination and targeted interventions in regulatory networks, to the development of mitigation policies for infectious diseases and financial contagion in economic systems. Solutions for these optimization tasks that are based purely on topological arguments are not fully satisfactory; in realistic settings the problem is often characterized by heterogeneous interactions and requires interventions over a finite time window via a restricted set of controllable nodes. The optimal distribution of available resources hence results from an interplay between network topology and spreading dynamics. We show how these problems can be addressed as particular instances of a universal analytical framework based on a scalable dynamic message-passing approach and demonstrate the efficacy of the method on a variety of real-world examples.
description: 10 pages and appendices, 6 figures
1 Brief an H[ans] G[eorg] Nägeli
Brief an Nägeli ...
Creators: name: Bronner, Franz Xaver
Publisher: name: [s.n.]
Year: 1809

description: von Fr[anz] X[aver] Bronner
description: Abschriften (Auszüge) dieses Briefs in Ms Car. XV 199.44b und Ms Car. XV 200.133a.a
Nature does not rely on long-lived electronic quantum coherence for photosynthetic energy transfer
Creators: name: Duan, Hong-Guang
name: Prokhorenko, Valentyn I.
name: Cogdell, Richard
name: Ashraf, Khuram
name: Stevens, Amy L.
name: Thorwart, Michael
name: Miller, R. J. Dwayne
Publisher: name: arXiv
Year: 2016
Subjects: subject: Biological Physics (physics.bio-ph)
subject: Chemical Physics (physics.chem-ph)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: During the first steps of photosynthesis, the energy of impinging solar photons is transformed into electronic excitation energy of the light-harvesting biomolecular complexes. The subsequent energy transfer to the reaction center is understood in terms of exciton quasiparticles which move on a grid of biomolecular sites on typical time scales less than 100 femtoseconds (fs). Since the early days of quantum mechanics, this energy transfer is described as an incoherent Forster hopping with classical site occupation probabilities, but with quantum mechanically determined rate constants. This orthodox picture has been challenged by ultrafast optical spectroscopy experiments with the Fenna-Matthews-Olson protein in which interference oscillatory signals up to 1.5 picoseconds were reported and interpreted as direct evidence of exceptionally long-lived electronic quantum coherence. Here, we show that the optical 2D photon echo spectra of this complex at ambient temperature in aqueous solution do not provide evidence of any long-lived electronic quantum coherence, but confirm the orthodox view of rapidly decaying electronic quantum coherence on a time scale of 60 fs. Our results give no hint that electronic quantum coherence plays any biofunctional role in real photoactive biomolecular complexes. Since this natural energy transfer complex is rather small and has a structurally well defined protein with the distances between bacteriochlorophylls being comparable to other light-harvesting complexes, we anticipate that this finding is general and directly applies to even larger photoactive biomolecular complexes.
An Addendum to the Heisenberg-Euler effective action beyond one loop
Creators: name: Gies, Holger
name: Karbstein, Felix
Publisher: name: arXiv
Year: 2016
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We study the effective interactions of external electromagnetic fields induced by fluctuations of virtual particles in the vacuum of quantum electrodynamics. Our main focus is on these interactions at two-loop order. We discuss in detail the emergence of the renowned Heisenberg-Euler effective action from the underlying microscopic theory of quantum electrodynamics, emphasizing its distinction from a standard one-particle irreducible effective action. In our explicit calculations we limit ourselves to constant and slowly varying external fields, allowing us to adopt a locally constant field approximation. One of our main findings is that at two-loop order there is a finite one-particle reducible contribution to the Heisenberg-Euler effective action in constant fields, which was previously assumed to vanish. In addition to their conceptual significance, our results are relevant for high-precision probes of quantum vacuum nonlinearity in strong electromagnetic fields.
description: 37 pages, 6 figures; v5: typos removed
Conductivity and Dissociation in Metallic Hydrogen: Implications for Planetary Interiors
Creators: name: Zaghoo, Mohamed
name: Silvera, Isaac F.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Liquid metallic hydrogen (LMH) was recently produced under static compression and high temperatures in bench-top experiments. Here, we report a study of the optical reflectance of LMH in the pressure region of 1.4-1.7 Mbar and use the Drude free-electron model to determine its optical conductivity. We find static electrical conductivity of metallic hydrogen to be 11,000-15,000 S/cm. A substantial dissociation fraction is required to best fit the energy dependence of the observed reflectance. LMH at our experimental conditions is largely atomic and degenerate, not primarily molecular. We determine a plasma frequency and the optical conductivity. Properties are used to analyze planetary structure of hydrogen rich planets such as Jupiter.
Additional file 1 of One chiral fingerprint to find them all
Creators: name: Orsi, Markus
name: Reymond, Jean-Louis
Publisher: name: figshare
Year: 2024
Subjects: subject: Organic Chemistry
subject: FOS: Chemical sciences

description: Additional file 1: Figure S1. Mean and standard deviation of the pairwise ECFP4C similarities calculated for all 5 selected actives of each dataset contained in the benchmarking platform. Figure S2. Mean and standard deviation of the pairwise MAP4C similarities calculated for all 5 selected actives of each dataset contained in the benchmarking platform. Figure S3. Property distribution in the set uniformly sampled from the extended benchmark. Figure S4. Scatterplots of chiral shingle ratio vs. chiral atoms ratio. Figure S5. EF5 values across all small molecules and peptide targets. Figure S6. BEDROC20 values across all small molecules and peptide targets. Figure S7. BEDROC100 values across all small molecules and peptide targets. Figure S8. RIE20 valuesbvacross all small molecules and peptide targets. Figure S9. RIE100 values across all small molecules and peptide targets. Figure S10. Pairwise Pearson correlations and Friedman-Nemenyi test among tested fingerprints, based on the ranked AUCs. Figure S11. Pairwise Pearson correlations and Friedman-Nemenyi test among tested fingerprints, based on the ranked EF1s from benchmark datasets. Figure S12. Pairwise Pearson correlations and Friedman-Nemenyi test among tested fingerprints, based on the ranked EF5s from benchmark datasets. Figure S13. a) Pairwise Pearson correlations and Friedman-Nemenyi test among tested fingerprints, based on the ranked BEDROC20s from benchmark datasets. Figure S14. Pairwise Pearson correlations and Friedman-Nemenyi test among tested fingerprints, based on the ranked BEDROC100s from benchmark datasets. Figure S15. Pairwise Pearson correlations andFriedman-Nemenyi test among tested fingerprints, based on the ranked RIE20s from benchmark datasets. Figure S16. Pairwise Pearson correlations and Friedman-Nemenyi test among tested fingerprints, based on the ranked RIE100s from benchmark datasets. Figure S17. Comparative analysis of MAP2C, MAP4C, MAP6C, APC, ECFP4C and ECFP6C Jaccard distance assignment on ln65 diastereomers and structural isomers. Figure S18. Comparative analysis of MAP2C, MAP4C, MAP6C, APC, ECFP4C and ECFP6C Jaccard distance assignment on polymyxin B2 diastereomers and structural isomers.
Dynamics and control of gold-encapped gallium arsenide nanowires imaged by 4D electron microscopy
Creators: name: Chen, Bin
name: Fu, Xuewen
name: Tang, Jau
name: Lysevych, Mykhaylo
name: Tan, Hark Hoe
name: Jagadish, Chennupati
name: Zewail, Ahmed H.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Eutectic related reaction is a special chemical/physical reaction involving multiple phases, solid and liquid. Visualization of phase reaction of composite nanomaterials with high spatial and temporal resolution provides a key understanding of alloy growth with important industrial applications. However, it has been a rather challenging task. Here we report the direct imaging and control of the phase reaction dynamics of a single, as-grown free-standing gallium arsenide nanowire encapped with a gold nanoparticle, free from environmental confinement or disturbance, using four-dimensional electron microscopy. The non-destructive preparation of as-grown free-standing nanowires without supporting films allows us to study their anisotropic properties in their native environment with better statistical character. A laser heating pulse initiates the eutectic related reaction at a temperature much lower than the melting points of the composite materials, followed by a precisely time-delayed electron pulse to visualize the irreversible transient states of nucleation, growth and solidification of the complex. Combined with theoretical modeling, useful thermodynamic parameters of the newly formed alloy phases and their crystal structures could be determined. This technique of dynamical control and 4D imaging of phase reaction processes on the nanometer-ultrafast time scale open new venues for engineering various reactions in a wide variety of other systems.
Localized Stress Fluctuations Drive Shear Thickening in Dense Suspensions
Creators: name: Rathee, Vikram
name: Blair, Daniel L.
name: Urbach, Jeffery S.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: The mechanical response of solid particles dispersed in a Newtonian fluid exhibits a wide range of nonlinear phenomena including a dramatic increase in the viscosity \cite{1-3} with increasing stress. If the volume fraction of the solid phase is moderately high, the suspension will undergo continuous shear thickening (CST), where the suspension viscosity increases smoothly with applied shear stress; at still higher volume fractions the suspension can display discontinuous shear thickening (DST), where the viscosity changes abruptly over several orders of magnitude upon increasing applied stress. Proposed models to explain this phenomenon are based in two distinct types of particle interactions, hydrodynamic\cite{2,4,5} and frictional\cite{6-10}. In both cases, the increase in the bulk viscosity is attributed to some form of localized clustering\cite{11,12}. However, the physical properties and dynamical behavior of these heterogeneities remains unclear. Here we show that continuous shear thickening originates from dynamic localized well defined regions of particles with a high viscosity that increases rapidly with concentration. Furthermore, we find that the spatial extent of these regions is largely determined by the distance between the shearing surfaces. Our results demonstrate that continuous shear thickening arises from increasingly frequent localized discontinuous transitions between coexisting low and high viscosity Newtonian fluid phases. Our results provide a critical physical link between the microscopic dynamical processes that determine particle interactions and bulk rheological response of shear thickened fluids.
Properties of real metallic surfaces: Effects of density functional semilocality and van der Waals nonlocality
Creators: name: Patra, Abhirup
name: Bates, Jefferson E.
name: Sun, Jianwei
name: Perdew, John P.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Other Condensed Matter (cond-mat.other)
subject: FOS: Physical sciences

description: We have computed the surface energies, work functions, and interlayer surface relaxations of clean (111), (110), and (100) surfaces of Al, Cu, Ru, Rh, Pd, Ag, Pt, and Au. Many of these metallic surfaces have technological or catalytic applications. We compare experimental reference values to those of the local density approximation (LDA), the Perdew-Burke-Ernzerhof (PBE) generalized gradient approximation (GGA), the PBEsol (PBE for solids) GGA, the SCAN meta-GGA, and SCAN+rVV10 (SCAN with a long-range van der Waals or vdW correction). The closest agreement with uncertain experimental values is achieved by the simplest density functional (LDA) and by the most sophisticated general-purpose one (SCAN+rVV10). The long-range vdW interaction increases the surface energies by about 10%, and the work functions by about 1%. LDA works for metal surfaces through a stronger-than-usual error cancellation. PBE yields the most-underestimated and presumably least accurate surface energies and work functions. Surface energies within the random phase approximation (RPA) are also reported. Interlayer relaxations from different functionals are in reasonable agreement with one another, and usually with experiment.
Additional file 3 of Equity, diversity and inclusion in simulation-based education: constructing a developmental framework for medical educators
Creators: name: Mutch, Jennifer
name: Golden, Shauna
name: Purdy, Eve
name: Chang, Chloe Hui Xin
name: Oliver, Nathan
name: Tallentire, Victoria Ruth
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Pharmacology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy
subject: Hematology

description: Additional file 3. Explanatory notes for construction of the new developmental framework.
3 Briefe an J[ohann] C[aspar] Lavater
Brief an Lavater ...
Creators: name: Gessner, Johannes
Publisher: name: [s.n.]
Year: 1763

description: von Johannes Geßner
description: Dabei ein Briefentwurf von Lavater an Salis, dat. 7.12.1776 (Rückseite von Nr. 315)
La Baronne de Wedel-Jarlsberg, Une page de l'histoire des Frères-Prêcheurs - La Province de Dacia
Creators: name: Eubel, Konrad
Publisher: name: Römische Quartalschrift
Year: 1970

description: Römische Quartalschrift, Bd. 13 (1899): Römische Quartalschrift, Band 13
1 Brief an J[ohann] Georg Nägeli, [Anna Elisabeth Nägeli]
Brief an Nägeli ...
Creators: name: Billeter, Johann Caspar
Publisher: name: [s.n.]
Year: 1820

description: von [Johann Caspar] Billiter
description: Briefanrede "Hrr Veter & Frau Bäsi", also an Nägeli und seine Frau gerichtet
description: Billeter: Kantonsfürsprech
An efficient algorithm for finding all possible input nodes for controlling complex networks
Creators: name: Zhang, Xizhe
name: Han, Jianfei
name: Zhang, Weixiong
Publisher: name: arXiv
Year: 2017
Subjects: subject: Discrete Mathematics (cs.DM)
subject: Social and Information Networks (cs.SI)
subject: Physics and Society (physics.soc-ph)
subject: FOS: Computer and information sciences
subject: FOS: Physical sciences

description: Understanding structural controllability of a complex network requires to identify a Minimum Input nodes Set (MIS) of the network. It has been suggested that finding an MIS is equivalent to computing a maximum matching of the network, where the unmatched nodes constitute an MIS. However, maximum matching of a network is often not unique, and finding all MISs may provide deep insights to the controllability of the network. Finding all possible input nodes, which form the union of all MISs, is computationally challenging for large networks. Here we present an efficient enumerative algorithm for the problem. The main idea is to modify a maximum matching algorithm to make it efficient for finding all possible input nodes by computing only one MIS. We rigorously proved the correctness of the new algorithm and evaluated its performance on synthetic and large real networks. The experimental results showed that the new algorithm ran several orders of magnitude faster than the existing method on large real networks.
Additional file 1 of Lesion-specific cortical activation following sensory stimulation in patients with subacute stroke
Creators: name: Li, Wei
name: Li, Chong
name: Liu, Aixian
name: Lin, Ping-Ju
name: Mo, Linhong
name: Zhao, Hongliang
name: Xu, Quan
name: Meng, Xiangzun
name: Ji, Linhong
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Environmental Sciences not elsewhere classified
subject: Science Policy
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified

description: Additional file 1: Fig. S1. Comparison of relative power in the beta3 band overlying between ipsilesional S1-M1 and contralesional S1-M1 in the baseline and during-FV (Focal vibration) phase in all the stroke patients. A shows the power of ipsilesional S1-M1 significantly lower than that of contralesional S1-M1 in the baseline phase in patients with basal ganglia hemorrhage. B shows the power of ipsilesional S1-M1 significantly lower than that of contralesional S1-M1 in the baseline phase in patients with basal ganglia ischemia. C shows the power of ipsilesional S1-M1 significantly higher than that of contralesional S1-M1 in the baseline phase in patients with brainstem ischemia. D shows the power of ipsilesional S1-M1 significantly lower than that of contralesional S1-M1 in the baseline and during-FV (Focal vibration) phase in with cortical ischemia. E shows the power of ipsilesional S1-M1 significantly lower than that of contralesional S1-M1 during FV in patients with mixed cortical–subcortical ischemia. Fig. S2. The relationship between MBI (modified Barthel Index) and LC (laterality coefficient) in patients with basal ganglia lesions in the different bands. A shows the correlation between MBI and LC in the beta1 band. B shows the correlation between MBI and LC in the beta2 band. Each rectangle represents one stroke subject. Fig. S3. The relationship between MBI (modified Barthel Index) and LC (laterality coefficient) in patients with basal ganglia ischemia in the beta3 band. Fig. S4. The relationship between LC (laterality coefficient) and FMA of upper extremity (FMU) in patients with basal ganglia lesion in the beta2 band. Fig. S5. A shows the relationship between MBI (modified Barthel Index) and FMA (Fugl–Meyer assessment) when stroke patients without FMA were excluded. B shows the relationship between MBI and FMA of the upper extremity (FMU) when stroke patients without FMU were excluded.
title: Διερεύνηση χωροκατακτητικών εξεργασιών του κεντρικού νευρικού συστήματος (ΚΝΣ) με τομογραφία εκπομπής ποζιτρονίων (PET): χρήση νεότερων ραδιοφαρμάκων
titleType: AlternativeTitle
Creators: name: Νικάκη, Αλεξάνδρα Β.
Publisher: name: University of Thessaly
Year: 2020
Subjects: subject: Κεντρικό νευρικό σύστημα -- Τομογραφία
subject: Εγκέφαλος -- Απεικόνιση
subject: Εγκέφαλος -- Τομογραφία
subject: Διαγνωστική απεικόνιση
subject: Τομογραφία, Ποζιτρονική
subject: Μοριακή διάγνωση
subject: Ραδιοφάρμακα

description: Σημείωση: διατίθεται συμπληρωματικό υλικό σε ξεχωριστό αρχείο.
ELIXIR-LU : Current node activities
Creators: name: Schneider, Reinhard
name: Gerloff, Dietlind
name: Venkata Satagopam
name: Krause, Roland
name: Trefois, Christophe
name: Gu, Wei
name: Lebioda, Jacek
name: Noua Toukourou
name: Pinar Alper
name: Becker, Regina
Publisher: name: F1000 Research Limited
Year: 2018

description: ELIXIR-LU is strongly focused on the management and analysis of human and translational medicine data for personalised medicine. The lack of adaptable systems that collect, integrate, and manage access to the many and varied types of health data effectively, remains a major hurdle for data FAIRification in this sector. At the same time, opening and sustaining (controlled) access to biomedical data for re-use in research without major obstacles is critical for understanding and treating human diseases. The current Node activities within the pan-European research infrastructure ELIXIR reflect our interests and ambitions in this area.

While ELIXIR-LU operates independently of a particular disease a priori, our “home” link to the Luxembourg Centre for Systems Biomedicine (LCSB) and our national mission engage us in collaborations and projects centred around Parkinson’s disease (PD), other neurodegenerative diseases, and rare diseases. On this poster, we discuss recent and on-going technical work in this context, including a ready-for-deployment Beacon, our clinical/translational medicine data catalog service (TMDC), our core services for clinical data hosting, and our training courses and activities. The facilitation of GDPR compliance is not discussed here but it is also a main priority of our activities (please refer to other posters, presentations and publications by the ELIXIR-LU and LCSB teams for more information).
Adding Python 3 support to Galaxy: a status report
Creators: name: Soranzo, Nicola
Publisher: name: F1000 Research Limited
Year: 2018

description: After an initial prototype in Perl, the Galaxy backend source code was rewritten in Python in 2005. At that time, the latest version of Python was 2.4. A new major version of Python (3.0) was released at the end of 2008, which broke backwards compatibility with Python 2.x. Since then, Python 2 and 3 have been maintained in parallel, but the last supported Python 2 minor release (2.7) will not be maintained upstream after January 1st, 2020 (see​ https://www.python.org/dev/peps/pep-0373/​ ).

Although the major Galaxy satellite projects (BioBlend, Planemo, Pulsar and galaxy-lib) are already available for Python 3, Galaxy itself still supports only Python 2.7. At the end of 2015 an effort was started to update the source code and its numerous dependencies to make Galaxy work also under Python 3. In the following two and a half years, over 60 pull requests related to Python 3 support were merged in the Galaxy GitHub repository. As a result, it is now possible to start Galaxy under Python 3, but more work is still needed to fix the many remaining bugs before it is finally ready for end users.

We describe the challenges involved in adding the Python 3 support without breaking the existing code, and the strategy we adopted. We also report on the current status, including the dependencies that are not yet ported and the test coverage.

The status of Python 3 support in Galaxy is tracked in the following GitHub issue: https://github.com/galaxyproject/galaxy/issues/1715 .