cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 7 of An international RAND/UCLA expert panel to determine the optimal diagnosis and management of burn inhalation injury
Creators: name: Milton-Jones, Helena
name: Soussi, Sabri
name: Davies, Roger
name: Charbonney, Emmanuel
name: Charles, Walton N.
name: Cleland, Heather
name: Dunn, Ken
name: Gantner, Dashiell
name: Giles, Julian
name: Jeschke, Marc
name: Lee, Nicole
name: Legrand, Matthieu
name: Lloyd, Joanne
name: Martin-Loeches, Ignacio
name: Pantet, Olivier
name: Samaan, Mark
name: Shelley, Odhran
name: Sisson, Alice
name: Spragg, Kaisa
name: Wood, Fiona
name: Yarrow, Jeremy
name: Vizcaychipi, Marcela Paola
name: Williams, Andrew
name: Leon-Villapalos, Jorge
name: Collins, Declan
name: Jones, Isabel
name: Singh, Suveer
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Science Policy

description: Additional file 7: Fig. S4. Appropriateness of airway management strategies for burn inhalation injury. A Airway management strategies for burn inhalation injury patients at risk of airway compromise. B Airway management strategies for burn inhalation injury patients anticipated to require endotracheal intubation exceeding seven days. Median ratings are presented (bold black line in each box) with the interquartile range (edges of box) and maximum and minimum ratings (extending vertical lines). Statements with median ratings of < 3.5 were classed as inappropriate, ≥ 3.5 and < 6.5 as uncertain and ≥ 6.5 as appropriate. *Disagreement (disagreement index ≥ 1) was present for one statement, which was classed as uncertain. Panellists n = 10. DI, disagreement index.
LUP903086 Supplemental material - Supplemental material for Vitamin D and bisphosphonate therapy in systemic lupus erythematosus patients who receive glucocorticoids: are we offering the best care?
Creators: name: S Sapkota
name: S Baig
name: T Hess
name: A M O’Connell
name: J Menk
name: M Shyne
name: P Fazeli
name: K Ensrud
name: A Shmagel
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111702 Aged Health Care
subject: FOS: Health sciences

description: Supplemental material, LUP903086 Supplemental material for Vitamin D and bisphosphonate therapy in systemic lupus erythematosus patients who receive glucocorticoids: are we offering the best care? by S Sapkota, S Baig, T Hess, AM O’Connell, J Menk, M Shyne, P Fazeli, K Ensrud and A Shmagel in Lupus
sj-pdf-2-jiv-10.1177_0886260520903130 – Supplemental material for Prevention Strategies for Sexual Harassment in Academic Medicine: A Qualitative Study
Creators: name: Jenner, Sabine C.
name: Djermester, Pia
name: Oertelt-Prigione, Sabine
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 160299 Criminology not elsewhere classified
subject: FOS: Law

description: Supplemental material, sj-pdf-2-jiv-10.1177_0886260520903130 for Prevention Strategies for Sexual Harassment in Academic Medicine: A Qualitative Study by Sabine C. Jenner, Pia Djermester and Sabine Oertelt-Prigione in Journal of Interpersonal Violence
Additional file 8 of An international RAND/UCLA expert panel to determine the optimal diagnosis and management of burn inhalation injury
Creators: name: Milton-Jones, Helena
name: Soussi, Sabri
name: Davies, Roger
name: Charbonney, Emmanuel
name: Charles, Walton N.
name: Cleland, Heather
name: Dunn, Ken
name: Gantner, Dashiell
name: Giles, Julian
name: Jeschke, Marc
name: Lee, Nicole
name: Legrand, Matthieu
name: Lloyd, Joanne
name: Martin-Loeches, Ignacio
name: Pantet, Olivier
name: Samaan, Mark
name: Shelley, Odhran
name: Sisson, Alice
name: Spragg, Kaisa
name: Wood, Fiona
name: Yarrow, Jeremy
name: Vizcaychipi, Marcela Paola
name: Williams, Andrew
name: Leon-Villapalos, Jorge
name: Collins, Declan
name: Jones, Isabel
name: Singh, Suveer
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Science Policy

description: Additional file 8: Fig. S5. Appropriateness of diagnostic and management strategies for burn inhalation injury associated systemic toxicity. A Management strategies for burn inhalation injury associated carbon monoxide toxicity. B Indicators of burn inhalation injury associated hydrogen cyanide toxicity. C Management strategies for burn inhalation injury associated hydrogen cyanide toxicity. D Timing of hydroxocobalamin administration for varying severities of burn inhalation injury. Median ratings are presented (bold black line in each box) with the interquartile range (edges of box) and maximum and minimum ratings (extending vertical lines). Statements with median ratings of 1–3 were classed as inappropriate, 4–6 as uncertain and 7–9 as appropriate. Disagreement (disagreement index ≥ 1) was not present for any statements. Clinical suspicion of hydrogen cyanide toxicity was defined as low (normal blood lactate and the absence of potentially suspicious features), moderate (moderate lactatemia below 8 mmol/L and few potentially suspicious features) and high (hyperlactataemia ≥ 8 mmol/L and potentially suspicious features including anion gap lactic metabolic acidosis, altered consciousness, unexplained cardiac dysfunction). Panellists n = 15. DI, disagreement index; HCN, hydrogen cyanide.
Toh_Supp_Table_1 – Supplemental material for Application of High-Throughput Automated Patch-Clamp Electrophysiology to Study Voltage-Gated Ion Channel Function in Primary Cortical Cultures
Creators: name: Toh, May Fern
name: Brooks, Julie M.
name: Strassmaier, Tim
name: Haedo, Rodolfo J.
name: Puryear, Corey B.
name: Roth, Bruce L.
name: Kosalvisal Ouk
name: Sokhom S. Pin
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: FOS: Clinical medicine

description: Supplemental material, Toh_Supp_Table_1 for Application of High-Throughput Automated Patch-Clamp Electrophysiology to Study Voltage-Gated Ion Channel Function in Primary Cortical Cultures by May Fern Toh, Julie M. Brooks, Tim Strassmaier, Rodolfo J. Haedo, Corey B. Puryear, Bruce Roth, Kosalvisal Ouk and Sokhom S. Pin in SLAS Discovery
AUT848532_Lay_Abstract – Supplemental material for Adapting and pre-testing the World Health Organization’s Caregiver Skills Training programme for autism and other developmental disorders in a very low-resource setting: Findings from Ethiopia
Creators: name: Bethlehem Tekola
name: Fikirte Girma
name: Mersha Kinfe
name: Abdurahman, Rehana
name: Tesfaye, Markos
name: Zemi Yenus
name: Salomone, Erica
name: Pacione, Laura
name: Abebaw Fekadu
name: Servili, Chiara
name: Hanlon, Charlotte
name: Hoekstra, Rosa A
Publisher: name: Figshare
Year: 2019
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: 110319 Psychiatry (incl. Psychotherapy)
subject: FOS: Clinical medicine
subject: 111799 Public Health and Health Services not elsewhere classified
subject: FOS: Health sciences
subject: Education
subject: 130312 Special Education and Disability
subject: FOS: Educational sciences

description: Supplemental material, AUT848532_Lay_Abstract for Adapting and pre-testing the World Health Organization’s Caregiver Skills Training programme for autism and other developmental disorders in a very low-resource setting: Findings from Ethiopia by Bethlehem Tekola, Fikirte Girma, Mersha Kinfe, Rehana Abdurahman, Markos Tesfaye, Zemi Yenus, Erica Salomone, Laura Pacione, Abebaw Fekadu, Chiara Servili, Charlotte Hanlon and Rosa A Hoekstra in Autism
Supplement_material__the_timeline_of_leprosy_patients_treatment – Supplemental material for Encouraging On-Time Completion of Leprosy Patients Treatment: Implementing E-Leprosy Framework to Primary Health Care in Indonesia
Creators: name: Rachmani, Enny
name: Chien-Yeh Hsu
name: Chang, Peter W. S.
name: Jumanto Jumanto
name: Fuad, Anis
name: Ningrum, Dina N. A.
name: Chih-Yang Yeh
name: Ming-Chin Lin
Publisher: name: Figshare
Year: 2019
Subjects: subject: 111799 Public Health and Health Services not elsewhere classified
subject: FOS: Health sciences

description: Supplemental material, Supplement_material__the_timeline_of_leprosy_patients_treatment for Encouraging On-Time Completion of Leprosy Patients Treatment: Implementing E-Leprosy Framework to Primary Health Care in Indonesia by Enny Rachmani, Chien-Yeh Hsu, Peter W. S. Chang, Jumanto Jumanto, Anis Fuad, Dina N. A. Ningrum, Chih-Yang Yeh and Ming-Chin Lin in Asia Pacific Journal of Public Health
Additional file 9 of An international RAND/UCLA expert panel to determine the optimal diagnosis and management of burn inhalation injury
Creators: name: Milton-Jones, Helena
name: Soussi, Sabri
name: Davies, Roger
name: Charbonney, Emmanuel
name: Charles, Walton N.
name: Cleland, Heather
name: Dunn, Ken
name: Gantner, Dashiell
name: Giles, Julian
name: Jeschke, Marc
name: Lee, Nicole
name: Legrand, Matthieu
name: Lloyd, Joanne
name: Martin-Loeches, Ignacio
name: Pantet, Olivier
name: Samaan, Mark
name: Shelley, Odhran
name: Sisson, Alice
name: Spragg, Kaisa
name: Wood, Fiona
name: Yarrow, Jeremy
name: Vizcaychipi, Marcela Paola
name: Williams, Andrew
name: Leon-Villapalos, Jorge
name: Collins, Declan
name: Jones, Isabel
name: Singh, Suveer
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Science Policy

description: Additional file 9: Fig. S6. Appropriateness of ventilation strategies for burn inhalation injury and/or acute respiratory distress syndrome. A Invasive mechanical ventilation modalities for acute respiratory distress syndrome, burn inhalation injury or burn inhalation injury with concomitant acute respiratory distress syndrome. B Mechanical ventilation adjuncts for burn inhalation injury patients with refractory hypoxaemia. Median ratings are presented (bold black line in each box) with the interquartile range (edges of box) and maximum and minimum ratings (extending vertical lines). Statements with median ratings of < 3.5 were classed as inappropriate, ≥ 3.5 and < 6.5 as uncertain and ≥ 6.5 as appropriate. *Disagreement (disagreement index ≥ 1) was present for one statement, which was classed as uncertain. Lung protective ventilatory strategies = tidal volume < 6 mL/kg ideal body weight, plateau pressure < 30 cmH20. Panellists n = 10. ARDS, acute respiratory distress syndrome; BII, burn inhalation injury; DI, disagreement index.
DS_10.1177_0022034520902452 – Supplemental material for Modeling Normal and Dysbiotic Subgingival Microbiomes: Effect of Nutrients
Creators: name: D. Baraniya
name: M. Naginyte
name: T. Chen
name: J.M. Albandar
name: S.M. Chialastri
name: D.A. Devine
name: P.D. Marsh
name: N.N. Al-Hebshi
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 110599 Dentistry not elsewhere classified
subject: FOS: Clinical medicine
subject: 91299 Materials Engineering not elsewhere classified
subject: FOS: Materials engineering

description: Supplemental material, DS_10.1177_0022034520902452 for Modeling Normal and Dysbiotic Subgingival Microbiomes: Effect of Nutrients by D. Baraniya, M. Naginyte, T. Chen, J.M. Albandar, S.M. Chialastri, D.A. Devine, P.D. Marsh and N.N. Al-hebshi in Journal of Dental Research
Additional file 10 of An international RAND/UCLA expert panel to determine the optimal diagnosis and management of burn inhalation injury
Creators: name: Milton-Jones, Helena
name: Soussi, Sabri
name: Davies, Roger
name: Charbonney, Emmanuel
name: Charles, Walton N.
name: Cleland, Heather
name: Dunn, Ken
name: Gantner, Dashiell
name: Giles, Julian
name: Jeschke, Marc
name: Lee, Nicole
name: Legrand, Matthieu
name: Lloyd, Joanne
name: Martin-Loeches, Ignacio
name: Pantet, Olivier
name: Samaan, Mark
name: Shelley, Odhran
name: Sisson, Alice
name: Spragg, Kaisa
name: Wood, Fiona
name: Yarrow, Jeremy
name: Vizcaychipi, Marcela Paola
name: Williams, Andrew
name: Leon-Villapalos, Jorge
name: Collins, Declan
name: Jones, Isabel
name: Singh, Suveer
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Science Policy

description: Additional file 10: Fig. S7. Appropriateness of pharmacological therapies for varying severities of burn inhalation injury. Median ratings are presented (bold black line in each box) with the interquartile range (edges of box) and maximum and minimum ratings (extending vertical lines). Statements with median ratings of 1–3 were classed as inappropriate, 4–6 as uncertain and 7–9 as appropriate. *Disagreement (disagreement index ≥ 1) was present for three statements, which were classed as uncertain. Burn inhalation injury severity was defined according to Abbreviated Injury Score criteria as mild (grade 1), moderate (grade 2) and severe (grades 3–4). Panellists n = 15. BII, burn inhalation injury; DI, disagreement index; IU, international units.
Improving QoS and Utilisation in modern multi-core servers with Dynamic Cache Partitioning
Creators: name: Papadakis, Ioannis
name: Nikas, Konstantinos
name: Karakostas, Vasileios
name: Goumas, Georgios
name: Koziris, Nectarios
Publisher: name: mediaTUM - Dokumenten- und Publikationsserver der Technischen Universität München
Year: 2017
Subjects: Co-scheduling; Cache partitioning; Cache management; QoS

description: Co-execution of multiple workloads in modern multi-core servers may create severe performance degradation and unpredictable execution behavior, impacting significantly their Quality of Service (QoS) levels. To safeguard the QoS levels of high priority workloads, current resource allocation policies are quite conservative, disallowing their co-execution with low priority ones, creating a wasteful tradeoff between QoS and aggregated system throughput. In this paper we utilise the cache monitoring and allocation facilities provided by modern processors and implement a dynamic cache partitioning scheme, where high-priority workloads are monitored and allocated the amount of shared cache that they actually need. This way, we are able to simultaneously maintain their QoS very close to the levels of full cache allocation and boost the system's throughput by allocating the surplus cache space to co-executing, low-priority applications.
Additional file 2 of Intra-individual variability in the neuroprotective and promyelinating properties of conditioned culture medium obtained from human adipose mesenchymal stromal cells
Creators: name: Baldassarro, Vito Antonio
name: Perut, Francesca
name: Cescatti, Maura
name: Pinto, Valentina
name: Fazio, Nicola
name: Alastra, Giuseppe
name: Parziale, Valentina
name: Bassotti, Alessandra
name: Fernandez, Mercedes
name: Giardino, Luciana
name: Baldini, Nicola
name: Calzà, Laura
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Biological Sciences not elsewhere classified

description: Additional file 2. Original pictures of the PCR gels for the mycoplasma contamination test showed in Supplementary Figure 3C.
Additional file 1 of Antimicrobial efficacy of sodium hypochlorite and hyper-pure chlorine dioxide in the depth of dentin tubules in vitro
Creators: name: Szabó, Enikő Vasziné
name: Huszta, Brigitta
name: Polyák, Melinda
name: Ruksakiet, Kasidid
name: Bernáth, Róbert
name: Ghidán, Ágoston
name: Csáki, Ágnes
name: Kostadinova, Milia
name: Dinya, Elek
name: Vág, János
name: Lohinai, Zsolt M.
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Supplementary Material 1
YAROQSIZ HOLATGA KELGAN TRANSFORMATOR MOYLARNING EKOLOGIK YECHIMLARI
Creators: name: Raximov, M.N.
Publisher: name: Zenodo
Year: 2024

description: Ushbu maqolada yaroqsiz transformator moyining atrof-muhitga yetkazadigan zararlari va ularni ekologik jihatdan zararsiz qayta ishlash usullari ko‘rib chiqilgan. Maqolada transformator moyining chiqindilarini kamaytirish va ulardan samarali foydalanish uchun muqobil yechimlar taklif qilingan. Transformator moyini qayta ishlash va tozalash jarayonlarining iqtisodiy va ekologik samaradorligi tahlil qilinadi. Avvalo, transformator moylarini yoqish va utilizatsiya qilishning atrof-muhitga salbiy ta’sirlari muhokama qilinadi. Keyinchalik, transformator moylarini past quvvatli isitish tizimlarida va noturar joy binolarini isitishda foydalanish  haqida tavsiyalar berilgan.
Towards a Lightweight RDMA Para-Virtualization for HPC
Creators: name: Fan, Shiqing
name: Chen, Fang
name: Rauchfuss, Holm
name: Har’el, Nadav
name: Schilling, Uwe
name: Struckmann, Nico
Publisher: name: mediaTUM - Dokumenten- und Publikationsserver der Technischen Universität München
Year: 2017
Subjects: Virtualization; virtIO; RDMA; HPC; Unikernel

description: Virtualization has gained increasing attention in the recent High Performance Computing (HPC) development. While HPC provides scalability and computing performance, HPC in the cloud benefits in addition from the agility and flexibility that virtualization brings. One of the major challenges of HPC in virtualized environments is RDMA virtualization. Existing implementations of RDMA virtualization focused on supporting VMs running Linux. However, HPC workloads rarely need a full-blown Linux OS. Compared to traditional Linux OS, emerging Library OSes, such as OSv, are becoming popular choices as they provide efficient, portable and lightweight cloud images. To enable virtualized RDMA for lightweight library OSes, drivers and interfaces must be re-designed to accommodate  the underlying virtual devices.
In this paper we present a novel design, the virtio-rdma driver for OSv, which aims to provide RDMA para-virtualization for lightweight library OS. We compare this new design with existing implementations for Linux, and analyze the advantages of virtio-rdma's architecture, its ease of migration to different operating systems, and the potential for performance improvement. We also propose a solution for integrating this para-virtualized driver into HPC platforms, enabling HPC application users to deploy their use cases smoothly in a virtualized HPC environment.
Perceived pressure to breastfeed negatively impacts postpartum mental health outcomes over time
Creators: name: Grattan, Rebecca
name: London, SM
name: Bueno, GE
Publisher: name: Open Access Te Herenga Waka-Victoria University of Wellington
Year: 2025
Subjects: classificationCode: 42
subject: Health sciences
subject: FOS: Health sciences
classificationCode: 4203
subject: Health services and systems
classificationCode: 4204
subject: Midwifery
classificationCode: 4206
subject: Public health

description: Introduction: Positive maternal mental health is associated with improved outcomes for infants, and yet the consideration of maternal mental health is often neglected in breastfeeding interventions. Breastfeeding interventions typically focus on breastfeeding promotion, and do not always include supports for the mother. This may result in isolated perceived pressure to breastfeed, the mental health impacts of which are not well understood. Methods: This mixed-methods, longitudinal study examined whether perceived pressure to breastfeed was associated with depression, suicide ideation, anxiety, birth trauma and stress concurrently and 4 weeks later for postpartum mothers. It also examined qualitative experiences of feeding. Results: Perceived pressure to breastfeed was associated with increased anxiety, stress and birth trauma symptoms four weeks later. Thematic analysis suggested this may be due to difficulties living up to the “breast is best” ideal, believing breastfeeding was part of success as a mother, lack of choices and autonomy in feeding choices for infants and general lack of support. Discussion: As such it appears we may be doing more harm than good by focusing our interventions for breastfeeding primarily on increasing pressure to breastfeed, and interventions should consider strategies for promoting positive maternal mental health alongside breastfeeding.
Thermomass Byte Lensing
Creators: name: Fourie, Martin
Publisher: name: figshare
Year: 2025
Subjects: classificationCode: 510804
subject: Quantum optics and quantum optomechanics

description: This study explores gravitational lensing through the TMB-TDB model, where thermomass bytes (TMBs) define curvature and permeability contrast governs light speed variations. Unlike traditional mass-based bending, lensing occurs due to byte field clearance in front of light. The model predicts lower lensing angles compared to General Relativity, aligning with observed expansion effects attributed to dark matter. The study validates these predictions using solar gravitational lensing, showing that permeability contrast and binder strength significantly influence space curvature and light propagation.
Supplemental_material_novel_high_throughput_ubiquitination_Akinjiyan_legends – Supplemental material for A Novel Luminescence-Based High-Throughput Approach for Cellular Resolution of Protein Ubiquitination Using Tandem Ubiquitin Binding Entities (TUBEs)
Creators: name: Favour A. Akinjiyan
name: Aleem Fazal
name: Hild, Marc
name: Beckwith, Rohan E. J.
name: Ross, Nathan T.
name: Joshiawa Paulk
name: Carbonneau, Seth
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: FOS: Clinical medicine

description: Supplemental material, Supplemental_material_novel_high_throughput_ubiquitination_Akinjiyan_legends for A Novel Luminescence-Based High-Throughput Approach for Cellular Resolution of Protein Ubiquitination Using Tandem Ubiquitin Binding Entities (TUBEs) by Favour A. Akinjiyan, Aleem Fazal, Marc Hild, Rohan E. J. Beckwith, Nathan T. Ross, Joshiawa Paulk and Seth Carbonneau in SLAS Discovery
Additional file 1 of Intra-individual variability in the neuroprotective and promyelinating properties of conditioned culture medium obtained from human adipose mesenchymal stromal cells
Creators: name: Baldassarro, Vito Antonio
name: Perut, Francesca
name: Cescatti, Maura
name: Pinto, Valentina
name: Fazio, Nicola
name: Alastra, Giuseppe
name: Parziale, Valentina
name: Bassotti, Alessandra
name: Fernandez, Mercedes
name: Giardino, Luciana
name: Baldini, Nicola
name: Calzà, Laura
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Biological Sciences not elsewhere classified

description: Additional file 1. Representative pictures and growth curve of adMSC (Supplementary Figure 1); representative pictures of in vitro differentiation of adMSCs into osteoblast and adipocytes (Supplementary Figure 2); representative pictures of semi-confluent adMSC samples at passage 3, cell density measurement and mycoplasma contamination PCR test (Supplementary Figure 3); effect of low and high pH on standard curves of detectable growth factors (Supplementary Figure 4).
sj-pdf-3-jiv-10.1177_0886260520903130 – Supplemental material for Prevention Strategies for Sexual Harassment in Academic Medicine: A Qualitative Study
Creators: name: Jenner, Sabine C.
name: Djermester, Pia
name: Oertelt-Prigione, Sabine
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 160299 Criminology not elsewhere classified
subject: FOS: Law

description: Supplemental material, sj-pdf-3-jiv-10.1177_0886260520903130 for Prevention Strategies for Sexual Harassment in Academic Medicine: A Qualitative Study by Sabine C. Jenner, Pia Djermester and Sabine Oertelt-Prigione in Journal of Interpersonal Violence
Additional file 1 of Genetic alterations that deregulate RB and PDGFRA signaling pathways drive tumor progression in IDH2-mutant astrocytoma
Creators: name: Tateishi, Kensuke
name: Miyake, Yohei
name: Nakamura, Taishi
name: Iwashita, Hiromichi
name: Hayashi, Takahiro
name: Oshima, Akito
name: Honma, Hirokuni
name: Hayashi, Hiroaki
name: Sugino, Kyoka
name: Kato, Miyui
name: Satomi, Kaishi
name: Fujii, Satoshi
name: Komori, Takashi
name: Yamamoto, Tetsuya
name: Cahill, Daniel P.
name: Wakimoto, Hiroaki
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Physical Sciences not elsewhere classified
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Cancer

description: Additional file 1. Figure S1. A Positron emission tomography indicated uptake (arrow head) of 18F-FDG (left) and 11C-methionine (right) in initial tumor (YMG25P). B Immunohistochemistry for indicated proteins in YMG25P and YMG25R tumor. Bars, 50μm; Figure S2. A Multiplex ligation-dependent probe amplification (MLPA) indicating copy number alterations for indicated genes in YMG25P (upper) and YMG25R (lower). B MLPA indicating chromosome partial deletion of 19q, CDKN2A hemizygous loss, and IDH2R172K mutation in YMG25P (upper). MLPA indicating chromosome partial deletion of 1p and 19q, CDKN2Ahemizygous loss, and IDH2R172K mutation in YMG25R (lower). C DNA methylation array indicating MGMT promotor methylation status in initial tumor (YMG25P, left) and recurrent tumor (YMG25R, right); Figure S3. A Immunohistochemistry for indicated proteins in initial (YMG25P, upper) and recurrent tumors (YMG25R, lower). B Western blotting of indicated proteins in YMG25P and YMG25R tumors. Bars, 50μm. C Relative cell viability of PI3K inhibitor (LY294002) and AKT inhibitor (GDC-0068) at day3. D Relative cell viability of YMG25R cells after IDH2 inhibitor (AG-221) at day 9. DMSO, control. Data are represented as the mean ± SEM. E, F Western blotting of indicated proteins in YMG25R cells after DMSO or AG-221 (5μM) treatment for 12 days. NS, not significant; Figure S4. A Immunohistochemistry for indicated proteins in YMG25R xenograft tumor. B Multiplex ligation-dependent probe amplification indicating copy number alterations for indicated genes in YMG25R xenograft. C Immunohistochemistry for indicated proteins in YMG25R xenograft (upper) and sham mouse brain (lower). Bars, 50μm. D Bar graphs indicating % immuno-positive cells for indicated proteins. *P < 0.05; Figure S5. A Genomic landscape of IDH-mutant astrocytoma with/without copy number alterations. GLASS and MSK lower-grade glioma cohorts are merged for analysis. B Kaplan-Meier curve showing survival difference of IDH1-mutant astrocytoma with/without either PDGFRAamplification, CDK4 amplification, MDM2 amplification, or CDKN2A deletion. P-value is determined by Log-rank test.
Supplementary_information_-_Discrete_domains_of_evidence_final – Supplemental material for Knowledge of peripheral artery disease: What do the public, healthcare practitioners, and trainees know?
Creators: name: Bridgwood, Bernadeta M
name: Nickinson, Andrew TO
name: Houghton, John SM
name: Pepper, Coral J
name: Sayers, Rob D
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: Cardiology
subject: 110323 Surgery
subject: FOS: Clinical medicine

description: Supplemental material, Supplementary_information_-_Discrete_domains_of_evidence_final for Knowledge of peripheral artery disease: What do the public, healthcare practitioners, and trainees know? by Bernadeta M Bridgwood, Andrew TO Nickinson, John SM Houghton, Coral J Pepper and Rob D Sayers in Vascular Medicine
ENHANCING VULNERABLE ROAD USER SAFETY USING MACHINE LEARNING AND CROWDSOURCED DATA: A STUDY OF PEDESTRIAN CRASHES AT SIGNALIZED AND NON-SIGNALIZED INTERSECTIONS
Creators: name: Alqahtani, Fahad
Publisher: name: Purdue University Graduate School
Year: 2025
Subjects: classificationCode: 400512
subject: Transport engineering

description: The number of vehicle-pedestrian crashes is increasing nationally and globally. Further, due to their lack of physical protection, pedestrians typically sustain severe injury when a crash occurs. There exists a need to identify the factors that affect pedestrian crashes frequency and severity, and to examine how these factors are different at signalized and non-signalized intersections. Therefore, this dissertation presents a comprehensive approach to investigating pedestrian safety (frequency and severity of crashes) at signalized and non-signalized intersections. Also, by identifying factors associated with higher risk of pedestrian crashes, this dissertation addresses the adequacy of the existing signalization warrants in practice.The study dataset combines crash data, pedestrian and vehicle volumes, and land use data. To streamline the data collection of intersection features, a software was developed in this study, reducing the time required by threefold. The data contains emerging crowdsourced and mobile-based data to capture pedestrian volumes. Negative binomial and ordered logit models were for the model calibration.Regarding crash severity, the study reveals that both driver and pedestrian impairment, multilane roads, and the presence of clear zones are significant factors of pedestrian crashes at both intersection types. However, at signalized intersections, proximity to a college campus and the presence of push-button devices are associated with less severe outcomes, while nighttime conditions significantly increase crash severity. At non-signalized intersection, the absence of lighting infrastructure during nighttime contributes to more severe crashes.A key methodological contribution is the hybrid approach developed to correct misclassified pedestrian crashes by integrating structured crash data with unstructured narrative reports. This method combines manual and semi-automated processes with natural language processing to accurately classify crash severity, identifying and reclassifying 5.5% of crashes in the study. The study provides a comprehensive comparative analysis of pedestrian crashes at signalized and non-signalized intersections, offering valuable insights for urban planners, traffic engineers, and policymakers in developing safer intersection designs and implementing data-driven safety interventions across diverse urban environments.
10.1177_1358863X19892690_Supplementary_tables_and_figures – Supplemental material for Effect of vorapaxar on cardiovascular and limb outcomes in patients with peripheral artery disease with and without coronary artery disease: Analysis from the TRA 2°P-TIMI 50 trial
Creators: name: Qamar, Arman
name: Morrow, David A
name: Creager, Mark A
name: Scirica, Benjamin M
name: Olin, Jeffrey W
name: Beckman, Joshua A
name: Murphy, Sabina A
name: Bonaca, Marc P
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: Cardiology
subject: 110323 Surgery
subject: FOS: Clinical medicine

description: Supplemental material, 10.1177_1358863X19892690_Supplementary_tables_and_figures for Effect of vorapaxar on cardiovascular and limb outcomes in patients with peripheral artery disease with and without coronary artery disease: Analysis from the TRA 2°P-TIMI 50 trial by Arman Qamar, David A Morrow, Mark A Creager, Benjamin M Scirica, Jeffrey W Olin, Joshua A Beckman, Sabina A Murphy and Marc P Bonaca in Vascular Medicine
Bioexcel Deliverable 2.2 – First Release Of Workflow Blocks And Portals
Creators: name: Hospital, Adam
name: Montras, Anna
name: Gelpí, Josep Lluís
name: Badia, Rosa M.
name: Newhouse, Steven
name: Dianes, Jose A.
name: Andrio, Pau
name: Soiland-Reyes, Stian
name: White, Darren J
name: Carter, Adam
name: Ippoliti, Emiliano
name: Melquiond, Adrien
name: de Groot, Bert
Publisher: name: Zenodo
Year: 2016
Subjects: Cloud Computing
HPC
Tools
Workflows

description: This deliverable presents a description of the workflow’s development process that will be followed by BioExcel partners, from the development, test and verification of the workflows to the final deployment and benchmarking. Software practices behind this process are also presented, demonstrating the strong connection of BioExcel with the Elixir bioinformatics infrastructure, and in particular, with the tools and interoperability platforms.

The current state of development of the computational infrastructures designed to store and deploy computing and data resources of BioExcel is also presented. Two main infrastructures, a development one (BSC) and a production one (EMBL-EBI) have been already set up, and are described in this document.

The first workflow prototype designed and implemented in BioExcel (Model Protein Mutants) is introduced. Steps followed during the development of this prototype are described and linked to the workflow’s development process presented in the first part of the document. An overview of the different workflows proposed from the project pilot use cases and presented in the D2.1 is also exposed.
Supplemental Material, Appendix_B - Nonsteroidal Anti-Inflammatory Drugs and Their Neuroprotective Role After an Acute Spinal Cord Injury: A Systematic Review of Animal Models
Creators: name: Lambrechts, Mark J.
name: Cook, James L.
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 110904 Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: 110314 Orthopaedics
subject: 110604 Sports Medicine
subject: FOS: Health sciences
subject: 110323 Surgery

description: Supplemental Material, Appendix_B for Nonsteroidal Anti-Inflammatory Drugs and Their Neuroprotective Role After an Acute Spinal Cord Injury: A Systematic Review of Animal Models by Mark J. Lambrechts and James L. Cook in Global Spine Journal
Multicellular Proportional-Integral-Derivative Control for Robust Regulation of Biological Processes"
Creators: name: Martinelli, Vittoria
Publisher: name: Zenodo
Year: 2024
Subjects: Cybergenetics

description: "Multicellular Proportional-Integral-Derivative Control for Robust Regulation of Biological Processes"

V. Martinelli, D. Fiore, D. Salzano, M. di Bernardo

In-Silico experiments to validate the PID control architecture.

The folders contains all the files to carry out both MATLAB and BSim simulations.

Matlab Simulations:

Matlab folder contains the following subfolders:

- Cell_to_cell_targets_variability contains the code to perform simulations of the multicellular P, PI, PD and PID control architectures under perturbations of the targets activation parameters. Cell growth and division is neglected here.

- PID_complete_model contains the code to simulate the aggregate PID model in nominal conditions.

- PID_Root_Contours contains the code to compute the root contours of the PID architecture.

- PID_SSA_agent_based contains the code to simulate the agent-based model of the PID architecture with stochastic noise. Stochastic simulations are performed by employing the Gillespie Stochastic Algorithm while neglecting cell growth and division.

All the Matlab simulation folders contain a main script to run (mainScript.m).

BSim Simulations:

BSim folder contain the code to simulate the PID control architecture in BSim. The main file is PID_Controller_main.java
ILRR_Arai-et-al_Supplemental_Online-Appendix – Supplemental material for Ethnic Stereotypes and Entry into Labor Market Programs
Creators: name: Arai, Mahmood
name: Gartell, Marie
name: Rödin, Magnus
name: Özcan, Gülay
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: Economics
subject: 150310 Organisation and Management Theory
subject: FOS: Economics and business

description: Supplemental material, ILRR_Arai-et-al_Supplemental_Online-Appendix for Ethnic Stereotypes and Entry into Labor Market Programs by Mahmood Arai, Marie Gartell, Magnus Rödin and Gülay Özcan in ILR Review
Supplementary_Figure_3B - Effect of Uric Acid-Lowering Agents on Cardiovascular Outcome in Patients With Heart Failure: A Systematic Review and Meta-Analysis of Clinical Studies
Creators: name: Kanbay, Mehmet
name: Baris Afsar
name: Siriopol, Dimitrie
name: Dincer, Neris
name: Erden, Nihan
name: Yilmaz, Onur
name: Sag, Alan A
name: Kuwabara, Masanari
name: Cherney, David
name: Rossignol, Patrick
name: Ortiz, Alberto
name: Covic, Adrian
Publisher: name: SAGE Journals
Year: 2020
Subjects: Cardiology

description: Supplementary_Figure_3B for Effect of Uric Acid-Lowering Agents on Cardiovascular Outcome in Patients With Heart Failure: A Systematic Review and Meta-Analysis of Clinical Studies by Mehmet Kanbay, Baris Afsar, Dimitrie Siriopol, Neris Dincer, Nihan Erden, Onur Yilmaz, Alan A Sag, Masanari Kuwabara, David Cherney, Patrick Rossignol, Alberto Ortiz and Adrian Covic in Angiology
Eisner_Online_Appendix – Supplemental material for The Impact of Laws on Norms Perceptions
Creators: name: Léïla Eisner
name: Turner-Zwinkels, Felicity
name: Spini, Dario
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology

description: Supplemental material, Eisner_Online_Appendix for The Impact of Laws on Norms Perceptions by Léïla Eisner, Felicity Turner-Zwinkels and Dario Spini in Personality and Social Psychology Bulletin
Supplemental Material, NEJ845127_SUPPLEMENTAL_MATERIAL_CLN - Nursing and euthanasia: A narrative review of the nursing ethics literature
Creators: name: Pesut, Barbara
name: Greig, Madeleine
name: Thorne, Sally
name: Storch, Janet
name: Burgess, Michael
name: Tishelman, Carol
name: Chambaere, Kenneth
name: Janke, Robert
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 111099 Nursing not elsewhere classified
subject: FOS: Health sciences

description: Supplemental Material, NEJ845127_SUPPLEMENTAL_MATERIAL_CLN for Nursing and euthanasia: A narrative review of the nursing ethics literature by Barbara Pesut, Madeleine Greig, Sally Thorne, Janet Storch, Michael Burgess, Carol Tishelman, Kenneth Chambaere and Robert Janke in Nursing Ethics
Supplemental Material, 833839_Appendix_E - Financial Management Activity Process: Qualitative inquiry of adults with acquired brain injury
Creators: name: Engel, Lisa L.
name: Beaton, Dorcas E.
name: Green, Robin E.
name: Dawson, Deirdre R.
Publisher: name: Figshare
Year: 2019
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences

description: Supplemental Material, 833839_Appendix_E for Financial Management Activity Process: Qualitative inquiry of adults with acquired brain injury by Lisa L. Engel, Dorcas E. Beaton, Robin E. Green and Deirdre R. Dawson in Canadian Journal of Occupational Therapy
Additional file 3 of Intra-individual variability in the neuroprotective and promyelinating properties of conditioned culture medium obtained from human adipose mesenchymal stromal cells
Creators: name: Baldassarro, Vito Antonio
name: Perut, Francesca
name: Cescatti, Maura
name: Pinto, Valentina
name: Fazio, Nicola
name: Alastra, Giuseppe
name: Parziale, Valentina
name: Bassotti, Alessandra
name: Fernandez, Mercedes
name: Giardino, Luciana
name: Baldini, Nicola
name: Calzà, Laura
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Biological Sciences not elsewhere classified

description: Additional file 3. Table showing the levels of detectable growth factors in 72-hour conditioned media of adMSC.
title: Visuelle Öffentlichkeit im Nationalsozialismus. Pressefotografie in Österreich 1938-1945
Creators: name: Krammer, Marion
name: Szeless, Margarethe
Publisher: name: ZZF - Leibniz-Zentrum für Zeithistorische Forschung: Visual History
Year: 2024

description: Im Vergleich zu älteren Untersuchungen zur Pressefotografie im Nationalsozialismus herrscht aktuell aufgrund der fortgeschrittenen Digitalisierung eine vollkommen neue Ausgangslage vor. Gerade Österreicht sticht im internationalen Vergleich positiv hervor.
Umso mehr springt die Diskrepanz zwischen zunehmender digitaler Verfügbarkeit von publizierter Fotografie und dem Fehlen systematischer Studien zur NS-Pressebildkultur in Österreichs Illustrierten ins Auge. In unserem Forschungsprojekt „Visuelle Öffentlichkeit im Nationalsozialismus“, das von 2023-2027 am Institut für Zeitgeschichte der Universität Wien durchgeführt wird, wollen wir die digitale Verfügbarkeit historischer Zeitungsbestände gezielt methodisch nutzen. In Zusammenarbeit mit dem Austrian Centre for Digital Humanities and Cultural Heritage der Österreichischen Akademie der Wissenschaften soll ein umfangreicher Bilderpool aus der österreichischen NS-Bildpresse als Untersuchungskorpus und Ausgangsbasis für quantitative und qualitative Analysen generiert werden. Während quantitative Erhebungen Aufschluss über die Bildakteur:innen der NS-Bildpresse und die visuelle Zusammensetzung der Illustrierten erlauben, soll in qualitativen Fallstudien mittels Bildanalysen und Bildvergleichen die Frage nach der propagandistischen Indienstnahme des Mediums Fotografie im Nationalsozialismus beantwortet werden.
Fast Unsupervised Tensor Restoration via Low-rank Deconvolution
Creators: David Reixach
Josep Ramon Morros Rubio
Publisher: name: IEEE Signal Processing Society
Year: 2024

description: Low-rank Deconvolution (LRD) has appeared as a new multi-dimensional representation model that enjoys important efficiency and flexibility properties. In this work we ask ourselves if this analytical model can compete against Deep Learning (DL) frameworks like Deep Image Prior (DIP) or Blind-Spot Networks (BSN) and other classical methods in the task of signal restoration. More specifically, we propose to extend LRD with differential regularization. This approach allows us to easily incorporate Total Variation (TV) and integral priors to the formulation leading to considerable performance tested on signal restoration tasks such image denoising and video enhancement, and at the same time benefiting from its small computational cost.
Additional file 1 of Effects of sputum bacillary load and age on GeneXpert and traditional methods in pulmonary tuberculosis: a 4-year retrospective comparative study
Creators: name: Li, Kui
name: Hu, Qianqian
name: Liu, Jun
name: Liu, Siyi
name: He, Yingli
Publisher: name: figshare
Year: 2024
Subjects: Space Science
Medicine
Biological Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified

description: Additional file 1: Supplementary table S1. Operation steps of detection method. Supplementary table S2. Sputum bacillary load report standard. Supplementary table S3. Comparison of the positive detection rates between combination of different methods with Xpert®. Supplementary table S4. Comparison of three methods in the diagnosis of bacteriologically confirmed pulmonary TB. Supplementary table S5. Correlation between sputum bacillary load and Ct value of GeneXpert®. Supplementary table S6. The distribution of rpoB mutations detected by Xpert® (n = 207). Supplementary table S7. Detection of Ct level and RIF resistance in Mtb-positive clinical specimens using Xpert®. Supplementary table S8. Comparison of the positive rate of Xpert® between initial treatment and retreatment. Supplementary table S9. Positive detection rate of Xpert® in different bacterial status of sputum (n = 980). Supplementary table S10. Clinical and laboratory characteristics of 17 cases with “indeterminate” result for susceptibility to RIF. Supplementary figure S1. Bi-directional influence of Ct value on Xpert® detection results. Supplementary figure S2. Receiver operating characteristic curve analysis of Ct value for distinguishing RIF resistance detection.
Additional file 1 of Age, dose, and binding to TfR on blood cells influence brain delivery of a TfR-transported antibody
Creators: name: Faresjö, Rebecca
name: Sehlin, Dag
name: Syvänen, Stina
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: Pharmacology
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Hematology

description: Additional file 1: Figure S1. a Lower plasma volume in young mice compared with aged b No difference in blood cell volumes between young and aged mice c Percentage in plasma of [125I]mAb3D6-scFv8D3 and [125I]mAb3D6 in young and aged mice at low or high doses Figure S2. a Weight of spleen in young and aged mice b %ID/spleen of bispecific or regular antibody at high and low doses. Figure S3. a %ID/spleen of [125I]mAb3D6-scFv8D3 in young and aged, and low and high doses in a WT and b tg-ArcSwe mice. Figure S4. %ID/g/bw brain of [125I]mAb3D6-scFv8D3. No difference between WT and tg-ArcSwe in brain uptake after 2 h. Figure S5. Brain-to-plasma ratios for [125I]mAb3D6-scFv8D3 or [125I]mAb3D6 -injected mice at low or high dosing. Figure S6. Capillary depletion for [125I]mAb3D6-administered mice at high dose, expressed as percentage in parenchymalor capillary enrichedfractions. Figure S7. a Capillary depletion for all low [125I]mAb3D6-scFv8D3-dosed mice, and b all high dosed mice, expressed as percentage in parenchymalor capillary enrichedfractions. Figure S8. Full membrane of capillary enriched brain pellets detected with anti-TfR1 antibody for TfR1, and anti-β-actin, β-actinas loading control.
SMM889080 Supplemental Material - Supplemental material for Estimating the sample mean and standard deviation from commonly reported quantiles in meta-analysis
Creators: name: McGrath, Sean
name: Zhao, XiaoFei
name: Steele, Russell
name: Thombs, Brett D.
name: Benedetti, Andrea
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: 111099 Nursing not elsewhere classified
subject: 160807 Sociological Methodology and Research Methods
subject: FOS: Sociology

description: Supplemental material, SMM889080 Supplemental Material for Estimating the sample mean and standard deviation from commonly reported quantiles in meta-analysis by Sean McGrath, XiaoFei Zhao, Russell Steele, Brett D. Thombs, Andrea Benedetti Kira E. Riehm Nazanin Saadat Alexander W.Levis Marleine Azar Danielle B. Rice Ying Sun Ankur KrishnanChen He Yin Wu Parash Mani Bhandari Dipika Neupane Mahrukh Imran Jill Boruff Pim Cuijpers Simon Gilbody John P.A. Ioannidis Lorie A. Kloda Dean McMillan Scott B.Patten Ian Shrier Roy C. Ziegelstein Dickens H.Akena Bruce Arroll Liat Ayalon Hamid R. Baradaran Murray Baron Anna Beraldi Charles H. Bombardier Peter ButterworthGregory Carter Marcos H.Chagas Juliana C. N.Chan Rushina Cholera Neerja Chowdhary Kerrie Clover Yeates Conwell Janneke M. de Man-van Ginkel Jaime Delgadillo Jesse R. Fann Felix H. Fischer Benjamin Fischler Daniel Fung Bizu Gelaye Felicity Goodyear-Smith Catherine G. Greeno Brian J. Hall Patricia A. Harrison Harter Martin Ulrich Hegerl Leanne Hides Stevan E. Hobfoll Marie Hudson Thomas Hyphantis Masatoshi Inagaki Khalida Ismail Nathalie JettéMohammad E.Khamseh Kim M.Kiely Yunxin KwanFemke Lamers Shen-Ing Liu Manote Lotrakul Sonia R.Loureiro Bernd Löwe Laura Marsh Anthony McGuireSherina Mohd Sidik Tiago N. Munhoz Kumiko Flávia L. Muramatsu Vikram Patel Brian W.Pence Philippe Persoons Angelo Picardi Katrin Reuter Alasdair G. Rooney Iná S. Santos Juwita Shaaban Abbey Sidebottom Adam Simning Lesley Stafford Sharon C. Sung Pei Lin Lynnette Tan Alyna Turner Christina M.van der Feltz-Cornelis Henk C. van Weert Paul A. Vöhringer White Jennifer Mary A. Whooley Kirsty Winkley Mitsuhiko Yamada Yuying Zhang in Statistical Methods in Medical Research