cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Transcriptional and epigenetic profiling of nutrient-deprived cells to identify novel regulators of autophagy
Creators: name: J.G.C. Peeters
name: L.W. Picavet
name: S.G.J.M. Coenen
name: M. Mauthe
name: S.J. Vervoort
name: E. Mocholi
name: C. De Heus
name: J. Klumperman
name: S.J. Vastert
name: F. Reggiori
name: P.J. Coffer
name: M. Mokry
name: J. Van Loosdregt
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Science Policy
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: Plant Biology
subject: Computational Biology

description: Macroautophagy (hereafter autophagy) is a lysosomal degradation pathway critical for maintaining cellular homeostasis and viability, and is predominantly regarded as a rapid and dynamic cytoplasmic process. To increase our understanding of the transcriptional and epigenetic events associated with autophagy, we performed extensive genome-wide transcriptomic and epigenomic profiling after nutrient deprivation in human autophagy-proficient and autophagy-deficient cells. We observed that nutrient deprivation leads to the transcriptional induction of numerous autophagy-associated genes. These transcriptional changes are reflected at the epigenetic level (H3K4me3, H3K27ac, and H3K56ac) and are independent of autophagic flux. As a proof of principle that this resource can be used to identify novel autophagy regulators, we followed up on one identified target: EGR1 (early growth response 1), which indeed appears to be a central transcriptional regulator of autophagy by affecting autophagy-associated gene expression and autophagic flux. Taken together, these data stress the relevance of transcriptional and epigenetic regulation of autophagy and can be used as a resource to identify (novel) factors involved in autophagy regulation.
Nanoskyrmion engineering with $sp$-electron materials: Sn monolayer on SiC(0001) surface
Creators: name: Badrtdinov, Danis I.
name: Nikolaev, Sergey A.
name: Rudenko, Alexander N.
name: Katsnelson, Mikhail I.
name: Mazurenko, Vladimir V.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: Materials with $sp$-magnetism demonstrate strongly nonlocal Coulomb interactions, which opens a way to probe correlations in the regimes not achievable in transition metal compounds. By the example of Sn monolayer on SiC(0001) surface, we show that such systems exhibit unusual but intriguing magnetic properties at the nanoscale. Physically, this is attributed to the presence of a significant ferromagnetic coupling, the so-called direct exchange, which fully compensates ubiquitous antiferromagnetic interactions of the superexchange origin. Having a nonlocal nature, the direct exchange was previously ignored because it cannot be captured within the conventional density functional methods and significantly challenges ground state models earlier proposed for Sn/SiC(0001). Furthermore, heavy adatoms induce strong spin-orbit coupling, which leads to a highly anisotropic form of the spin Hamiltonian, in which the Dzyaloshinskii-Moriya interaction is dominant. The latter is suggested to be responsible for the formation of a nanoskyrmion state at realistic magnetic fields and temperatures.
description: 4 pages, supplemental material
MAGAN: Aligning Biological Manifolds
Creators: name: Amodio, Matthew
name: Krishnaswamy, Smita
Publisher: name: arXiv
Year: 2018
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: It is increasingly common in many types of natural and physical systems (especially biological systems) to have different types of measurements performed on the same underlying system. In such settings, it is important to align the manifolds arising from each measurement in order to integrate such data and gain an improved picture of the system. We tackle this problem using generative adversarial networks (GANs). Recently, GANs have been utilized to try to find correspondences between sets of samples. However, these GANs are not explicitly designed for proper alignment of manifolds. We present a new GAN called the Manifold-Aligning GAN (MAGAN) that aligns two manifolds such that related points in each measurement space are aligned together. We demonstrate applications of MAGAN in single-cell biology in integrating two different measurement types together. In our demonstrated examples, cells from the same tissue are measured with both genomic (single-cell RNA-sequencing) and proteomic (mass cytometry) technologies. We show that the MAGAN successfully aligns them such that known correlations between measured markers are improved compared to other recently proposed models.
อิทธิพลของความผูกพันในองค์การและความมีประสิทธิภาพในตนเองต่อผลการดำเนินงานของธุรกิจการบินของประเทศไทย
Creators: name: ศศิชา สืบแสง
Publisher: name: คณะมนุษยศาสตร์และสังคมศาสตร์ มหาวิทยาลัยราชภัฏบ้านสมเด็จเจ้าพระยา
Year: 2558
Subjects: Airline Business, Business Performance, Organizational Commitment, Self-efficacy, ความผูกพันต่อองค์กร, ความสามารถในตนเอง, ธุรกิจการบิน, สมรรถนะในการทำงาน

description: วารสารมนุษยศาสตร์และสังคมศาสตร์ มหาวิทยาลัยราชภัฏบ้านสมเด็จเจ้าพระยา, 9, 2, 87-107
title: ADCO, Sixième cartulaire de Saint-Étienne de Dijon (1662), Cart. 30 (G 133), 441 folios, f. 781
Creators: name: de la Côte d'Or, Archives départementales
name: CG21/F.PETOT/2012
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: cartulaire

description: Sixième cartulaire de Saint-Étienne de Dijon (1662), Archives départementales de la Côte-d'Or, Cart. 30 (G 133), 441 folios, f. 781, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Sixième cartulaire de Saint-Étienne de Dijon (1662), Archives départementales de la Côte-d'Or, Cart. 30 (G 133), 441 folios, f. 781, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https://manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
Additional file 6 of Rice Carbohydrate-Binding Malectin-Like Protein, OsCBM1, Contributes to Drought-Stress Tolerance by Participating in NADPH Oxidase-Mediated ROS Production
Creators: name: Jing, Xiu-Qing
name: Li, Wen-Qiang
name: Zhou, Meng-Ru
name: Shi, Peng-Tao
name: Zhang, Ran
name: Shalmani, Abdullah
name: Muhammad, Izhar
name: Wang, Gang-Feng
name: Liu, Wen-Ting
name: Chen, Kun-Ming
Publisher: name: figshare
Year: 2021
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Neuroscience
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Mental Health
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 6: Table S2. Several gene groups that are differentially expressed in the OsCBM1-downexpressing RNAi54 plants as compared to WT.
Cicada rubra Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Cicadellidae
Cicada
Cicada rubra

description: Cicada rubra [spec. nov.]
C. rubra, alis deflexis fuscis: fasciis duabus flavis.
Habitat in America. Rolander.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 438, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
Cross-cleavage activity of Cas6b in crRNA processing of two different CRISPR-Cas systems in Methanosarcina mazei Gö1
Creators: name: Nickel, Lisa
name: Ulbricht, Andrea
name: Alkhnbashi, Omer S.
name: Förstner, Konrad U.
name: Cassidy, Liam
name: Weidenbach, Katrin
name: Backofen, Rolf
name: Schmitz, Ruth A.
Publisher: name: Taylor & Francis
Year: 2020
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Computational Biology

description: The clustered regularly interspaced short palindromic repeat (CRISPR) system is a prokaryotic adaptive defense system against foreign nucleic acids. In the methanoarchaeon Methanosarcina mazei Gö1, two types of CRISPR-Cas systems are present (type I-B and type III-C). Both loci encode a Cas6 endonuclease, Cas6b-IB and Cas6b-IIIC, typically responsible for maturation of functional short CRISPR RNAs (crRNAs). To evaluate potential cross cleavage activity, we biochemically characterized both Cas6b proteins regarding their crRNA binding behavior and their ability to process pre-crRNA from the respective CRISPR array in vivo. Maturation of crRNA was studied in the respective single deletion mutants by northern blot and RNA-Seq analysis demonstrating that in vivo primarily Cas6b-IB is responsible for crRNA processing of both CRISPR arrays. Tentative protein level evidence for the translation of both Cas6b proteins under standard growth conditions was detected, arguing for different activities or a potential non-redundant role of Cas6b-IIIC within the cell. Conservation of both Cas6 endonucleases was observed in several other M. mazei isolates, though a wide variety was displayed. In general, repeat and leader sequence conservation revealed a close correlation in the M. mazei strains. The repeat sequences from both CRISPR arrays from M. mazei Gö1 contain the same sequence motif with differences only in two nucleotides. These data stand in contrast to all other analyzed M. mazei isolates, which have at least one additional CRISPR array with repeats belonging to another sequence motif. This conforms to the finding that Cas6b-IB is the crucial and functional endonuclease in M. mazei Gö1. Abbreviations: sRNA: small RNA; crRNA: CRISPR RNA; pre-crRNAs: Precursor CRISPR RNA; CRISPR: clustered regularly interspaced short palindromic repeats; Cas: CRISPR associated; nt: nucleotide; RNP: ribonucleoprotein; RBS: ribosome binding site
A REVIEW ON BIOETHANOL PRODUCTION FROM AGRICULTURAL MATERIALS
Creators: name: P. D. I, Ebienfa
name: B.E, Yabefa
Publisher: name: top journals
Year: 2025
Subjects: bioethanol, biomass, pretreatment, fermentation, substrates

description: Bioethanol is a type of biofuel produced by the fermentation of organic materials such as crops and agricultural wastes. In this study, the production of ethanol from various agricultural materials have been reviewed. Some examples of feedstock for ethanol production include; corn, sugarcane, potatoes, cassava etc. The process of ethanol production is normally done in different including pretreatment, hydrolysis, fermentation distillation, dehydration. The ethanol produced from agricultural materials as feedstock can be used fuel in vehicles that use the petroleum based gasoline. However, literature is scarce on the review of bioethanol from agricultural materials. Therefore, this study intends to discuss the production of bioethanol from agro-materials
title: ADCO, Ordre cistercien et abbaye de Cîteaux : comptes pour l'ordre (1337-1347), comptes du boursier (1377-1402) (11 H 1160), f. 00506
Creators: name: de la Côte-d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CBMA/CG21/F.PETOT/2017
name: Petot, Frédéric
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: comptes
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: Ordre cistercien et abbaye de Cîteaux : comptes pour l'ordre (1337-1347), comptes du boursier (1377-1402), Archives départementales de la Côte-d'Or, (11 H 1160). Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Ordre cistercien et abbaye de Cîteaux : comptes pour l'ordre (1337-1347), comptes du boursier (1377-1402), Archives départementales de la Côte-d'Or, (11 H 1160), f. 00506, in Projet CBMA - Corpus Burgundiae Medii Aevi \[Ressource en ligne\], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
Reheating and Dark Radiation after Fibre Inflation
Creators: name: Cicoli, Michele
name: Piovano, Gabriel A.
Publisher: name: arXiv
Year: 2018
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We study perturbative reheating at the end of fibre inflation where the inflaton is a closed string modulus with a Starobinsky-like potential. We first derive the spectral index $n_s$ and the tensor-to-scalar ratio $r$ as a function of the number of efoldings and the parameter $R$ which controls slow-roll breaking corrections. We then compute the inflaton couplings and decay rates into ultra-light bulk axions and visible sector fields on D7-branes wrapping the inflaton divisor. This leads to a reheating temperature of order $10^{10}$ GeV which requires $52$ efoldings. Ultra-light axions contribute to dark radiation even if $ΔN_{\rm eff}$ is almost negligible in the generic case where the visible sector D7-stack supports a non-zero gauge flux. If the parameter $R$ is chosen to be small enough, $n_s\simeq 0.965$ is then in perfect agreement with current observations while $r$ turns out to be of order $r\simeq 0.007$. If instead the flux on the inflaton divisor is turned off, $ΔN_{\rm eff}\lesssim 0.6$ which, when used as a prior for Planck data, requires $n_s\simeq 0.99$. After $R$ is fixed to obtain such a value of $n_s$, primordial gravity waves are larger since $r\simeq 0.01$.
description: 29 pages + references, 6 figures; matches published version
D2.1 Initial detailed architectural and functional site facilities description
Creators: name: Legouable, Rodolphe
name: Trichia, Kostas
name: Yiouli Kritikou
name: Ntogkas, Christos
name: Loukas, George
name: Georgos Agapiou
name: Kostopoulo, Nikos
name: Kravariotis, Konstantinos
name: Kitra, Maria
name: Tzoulis, Andreas
name: Paraskevakis, Emmanouil
name: Bousselmi, Ayoub
name: Knopp, Raymond
name: Corriou, Michel
name: Morant, Sergio
name: Roullet, Laurent
name: Carrozzo, Gino
name: JAIME GARCIA-REINOSO
name: Berberana, Ignacio
name: Boldi, Mauro
name: Gavazzi, Roberto
name: Toscano, Orazio
name: Stroppolo, Luca
name: Sessler, Anna
name: Casetti, Claudio
name: Giaccone, Paolo
name: Canale, Silvia
name: Chianese, Yuri
name: Ciucciarelli, Graziano
name: Suraci, Vincenzo
name: Tognaccini, Marco
name: Rodera, Manuel
Publisher: name: Zenodo
Year: 2018

description: This deliverable contains the description of the four European (France, Greece, Italia and Spain) sites facilities that compose the 5G end-to-end infrastructure of 5G EVE. Since the deployment of the four facilities is in progress at the time of delivery of this document, the information here provided is to be considered as the state of hardware and software assets in each site facility planned for the end of April 2019, when the initial access to the 5G EVE platforms will be granted to the verticals to be integrated. The site facilities evolution will follow the specifications of 3GPP – Release 16 and the roadmap of equipment manufacturers. The final state of the different sites facilities that will compose the E2E facility will be described in the D2.3 deliverable due at the end of the project (June 2021).
 Each site facility is described individually, with an effort to identify the possible commonalities and inter-relations among site architectures which aims at easing the process of smooth interworking in the 5G EVE platform.
 For each of the sites, we provide through this document a description of the reference high level architecture and a summary of the main vertical use-cases that is planned to integrate. A set of technical features is also provided, such as: • the RAN architecture (RRH, BBU, Frequency bands, implemented technologies, etc.); • the distributed cloud/MEC elements; • the CORE architecture; • the network management and orchestration functions; • the tools and software used for the network deployment, supervision management and KPI testing and validation; • the main interfaces between layers. The individual description of each of the sites allows to analyse the possible convergence between the different approaches of network deployment and thus to give the common blocks that can build the interworking between sites and the management of the 5G EVE end-to-end facility.
 In the conclusion, we present a summary table of the technologies used by each site for each part of the network framework.
The averaged null energy condition and difference inequalities in quantum field theory
Creators: name: Yurtsever, Ulvi
Publisher: name: arXiv
Year: 1994
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: Recently, Larry Ford and Tom Roman have discovered that in a flat cylindrical space, although the stress-energy tensor itself fails to satisfy the averaged null energy condition (ANEC) along the (non-achronal) null geodesics, when the ``Casimir-vacuum" contribution is subtracted from the stress-energy the resulting tensor does satisfy the ANEC inequality. Ford and Roman name this class of constraints on the quantum stress-energy tensor ``difference inequalities." Here I give a proof of the difference inequality for a minimally coupled massless scalar field in an arbitrary two-dimensional spacetime, using the same techniques as those we relied on to prove ANEC in an earlier paper with Robert Wald. I begin with an overview of averaged energy conditions in quantum field theory.
description: 20 pages
The value of informational arbitrage
Creators: name: Chau, Huy N.
name: Cosso, Andrea
name: Fontana, Claudio
Publisher: name: arXiv
Year: 2018
Subjects: subject: Mathematical Finance (q-fin.MF)
subject: Probability (math.PR)
subject: FOS: Economics and business
subject: FOS: Mathematics
subject: 60G44, 91B44, 91G10

description: In the context of a general semimartingale model of a complete market, we aim at answering the following question: How much is an investor willing to pay for learning some inside information that allows to achieve arbitrage? If such a value exists, we call it the value of informational arbitrage. In particular, we are interested in the case where the inside information yields arbitrage opportunities but not unbounded profits with bounded risk. In the spirit of Amendinger et al. (2003, Finance Stoch.), we provide a general answer to the above question by relying on an indifference valuation approach. To this effect, we establish some new results on models with inside information and study optimal investment-consumption problems in the presence of initial information and arbitrage, also allowing for the possibility of leveraged positions. We characterize when the value of informational arbitrage is universal, in the sense that it does not depend on the preference structure. Our results are illustrated with several explicit examples.
description: 36 pages
title: ADCO, Ordre cistercien et abbaye de Cîteaux : comptes pour l'ordre (1337-1347), comptes du boursier (1377-1402) (11 H 1160), f. 00082
Creators: name: de la Côte-d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CBMA/CG21/F.PETOT/2017
name: Petot, Frédéric
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: comptes
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge

description: Ordre cistercien et abbaye de Cîteaux : comptes pour l'ordre (1337-1347), comptes du boursier (1377-1402), Archives départementales de la Côte-d'Or, (11 H 1160). Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Ordre cistercien et abbaye de Cîteaux : comptes pour l'ordre (1337-1347), comptes du boursier (1377-1402), Archives départementales de la Côte-d'Or, (11 H 1160), f. 00082, in Projet CBMA - Corpus Burgundiae Medii Aevi \[Ressource en ligne\], https:// manuscrits.cbma-project.eu/
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
Tunable plasmons in ultrathin metal films
Creators: name: Maniyara, Rinu Abraham
name: Rodrigo, Daniel
name: Yu, Renwen
name: Canet-Ferrer, Josep
name: Ghosh, Dhriti Sundar
name: Yongsunthon, Ruchirej
name: Baker, David E.
name: Rezikyan, Aram
name: de Abajo, F. Javier García
name: Pruneri, Valerio
Publisher: name: arXiv
Year: 2018
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The physics of electrons, photons, and their plasmonic interactions changes greatly when one or more dimensions are reduced down to the nanometer scale. For example, graphene shows unique electrical, optical, and plasmonic properties, which are tunable through gating or chemical doping. Similarly, ultrathin metal films (UTMFs) down to atomic thickness can possess new quantum optical effects, peculiar dielectric properties, and predicted strong plasmons. However, truly two-dimensional plasmonics in metals has so far elusive because of the difficulty in producing large areas of sufficiently thin continuous films. Thanks to a deposition technique that allows percolation even at 1 nm thickness, we demonstrate plasmons in few-nanometer gold UTMFs, with clear evidence of new dispersion regimes and large electrical tunability. Resonance peaks at 1.5-5 micrometer wavelengths are shifted by hundreds of nanometers and amplitude-modulated by tens of per cent through gating using relatively low voltages. The results suggest ways to use metals in plasmonic applications, such as electro-optic modulation, bio-sensing, and smart windows.
description: 11 pages, 3 figures
Cross-cleavage activity of Cas6b in crRNA processing of two different CRISPR-Cas systems in Methanosarcina mazei Gö1
Creators: name: Nickel, Lisa
name: Ulbricht, Andrea
name: Alkhnbashi, Omer S.
name: Förstner, Konrad U.
name: Cassidy, Liam
name: Weidenbach, Katrin
name: Backofen, Rolf
name: Schmitz, Ruth A.
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Computational Biology

description: The clustered regularly interspaced short palindromic repeat (CRISPR) system is a prokaryotic adaptive defense system against foreign nucleic acids. In the methanoarchaeon Methanosarcina mazei Gö1, two types of CRISPR-Cas systems are present (type I-B and type III-C). Both loci encode a Cas6 endonuclease, Cas6b-IB and Cas6b-IIIC, typically responsible for maturation of functional short CRISPR RNAs (crRNAs). To evaluate potential cross cleavage activity, we biochemically characterized both Cas6b proteins regarding their crRNA binding behavior and their ability to process pre-crRNA from the respective CRISPR array in vivo. Maturation of crRNA was studied in the respective single deletion mutants by northern blot and RNA-Seq analysis demonstrating that in vivo primarily Cas6b-IB is responsible for crRNA processing of both CRISPR arrays. Tentative protein level evidence for the translation of both Cas6b proteins under standard growth conditions was detected, arguing for different activities or a potential non-redundant role of Cas6b-IIIC within the cell. Conservation of both Cas6 endonucleases was observed in several other M. mazei isolates, though a wide variety was displayed. In general, repeat and leader sequence conservation revealed a close correlation in the M. mazei strains. The repeat sequences from both CRISPR arrays from M. mazei Gö1 contain the same sequence motif with differences only in two nucleotides. These data stand in contrast to all other analyzed M. mazei isolates, which have at least one additional CRISPR array with repeats belonging to another sequence motif. This conforms to the finding that Cas6b-IB is the crucial and functional endonuclease in M. mazei Gö1. Abbreviations: sRNA: small RNA; crRNA: CRISPR RNA; pre-crRNAs: Precursor CRISPR RNA; CRISPR: clustered regularly interspaced short palindromic repeats; Cas: CRISPR associated; nt: nucleotide; RNP: ribonucleoprotein; RBS: ribosome binding site
The influence of a sub-stellar continent on the climate of a tidally-locked exoplanet
Creators: name: Lewis, Neil T.
name: Lambert, F. Hugo
name: Boutle, Ian A.
name: Mayne, Nathan J.
name: Manners, James
name: Acreman, David M.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: Previous studies have demonstrated that continental carbon-silicate weathering is important to the continued habitability of a terrestrial planet. Despite this, few studies have considered the influence of land on the climate of a tidally-locked planet. In this work we use the Met Office Unified Model, coupled to a land surface model, to investigate the climate effects of a continent located at the sub-stellar point. We choose to use the orbital and planetary parameters of Proxima Centauri B as a template, to allow comparison with the work of others. A region of the surface where $T_{\text{s}} > 273.15\,\text{K}$ is always retained, and previous conclusions on the habitability of Proxima Centauri B remain intact. We find that sub-stellar land causes global cooling, and increases day-night temperature contrasts by limiting heat redistribution. Furthermore, we find that sub-stellar land is able to introduce a regime change in the atmospheric circulation. Specifically, when a continent offset to the east of the sub-stellar point is introduced, we observe the formation of two mid-latitude counterrotating jets, and a substantially weakened equatorial superrotating jet.
description: 19 pages, 8 figures, Accepted for publication in The Astrophysical Journal
Receiver-Operating-Characteristic Analysis Reveals Superiority of Scale-Dependent Wavelet and Spectral Measures for Assessing Cardiac Dysfunction
Creators: name: Thurner, Stefan
name: Feurstein, Markus C.
name: Lowen, Steven B.
name: Teich, Malvin C.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Medical Physics (physics.med-ph)
subject: Quantitative Biology (q-bio)
subject: FOS: Physical sciences
subject: FOS: Biological sciences

description: Receiver-operating-characteristic (ROC) analysis was used to assess the suitability of various heart rate variability (HRV) measures for correctly classifying electrocardiogram records of varying lengths as normal or revealing the presence of heart failure. Scale-dependent HRV measures were found to be substantially superior to scale-independent measures (scaling exponents) for discriminating the two classes of data over a broad range of record lengths. The wavelet-coefficient standard deviation at a scale near 32 heartbeat intervals, and its spectral counterpart near 1/32 cycles per interval, provide reliable results using record lengths just minutes long. A jittered integrate-and-fire model built around a fractal Gaussian-noise kernel provides a realistic, though not perfect, simulation of heartbeat sequences.
description: 4 pages, ps figures in a single ps file. Published in Physical Review Letters, Volume 81, Number 25, 5688-5691 (1998)
Cicada flava Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Cicadellidae
Cicada
Cicada flava

description: Cicada flava [spec. nov.]
C. flava compressa. Fn. svec. 643.
Habitat in Europa.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 438, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
Note on Massive Spin 2 in Curved Space
Creators: name: Bengtsson, Ingemar
Publisher: name: arXiv
Year: 1994
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We give a Hamiltonian formulation of massive spin 2 theory in arbitrary Einstein space-times. We pay particular attention to Higuchi's forbidden mass range in deSitter space.
description: 8pp, Latex
Cluster ionization via two-plasmon excitation
Creators: name: Bertsch, G. F.
name: Van Giai, N.
name: Mau, N. Vinh
Publisher: name: arXiv
Year: 1999
Subjects: subject: Atomic and Molecular Clusters (physics.atm-clus)
subject: FOS: Physical sciences

description: We calculate the two-photon ionization of clusters for photon energies near the surface plasmon resonance. The results are expressed in terms of the ionization rate of a double plasmon excitation, which is calculated perturbatively. For the conditions of the experiment by Schlipper et al., we find an ionization rate of the order of 0.05-0.10 fs^(-1). This rate is used to determine the ionization probability in an external field in terms of the number of photons absorbed and the duration of the field. The probability also depends on the damping rate of the surface plasmon. Agreement with experiment can only be achieved if the plasmon damping is considerably smaller than its observed width in the room-temperature single-photon absorption spectrum.
description: 17 pages and 6 PostScript figures
A-type Quiver Varieties and ADHM Moduli Spaces
Creators: name: Koroteev, Peter
Publisher: name: arXiv
Year: 2018
Subjects: subject: Algebraic Geometry (math.AG)
subject: High Energy Physics - Theory (hep-th)
subject: Mathematical Physics (math-ph)
subject: Quantum Algebra (math.QA)
subject: Representation Theory (math.RT)
subject: FOS: Mathematics
subject: FOS: Physical sciences

description: We study quantum geometry of Nakajima quiver varieties of two different types - framed A-type quivers and ADHM quivers. While these spaces look completely different we find a surprising connection between equivariant K-theories thereof with a nontrivial match between their equivariant parameters. In particular, we demonstrate that quantum equivariant K-theory of $A_n$ quiver varieties in a certain $n\to\infty$ limit reproduces equivariant K-theory of the Hilbert scheme of points on $\mathbb{C}^2$. We analyze the correspondence from the point of view of enumerative geometry, representation theory and integrable systems. We also propose a conjecture which relates spectra of quantum multiplication operators in K-theory of the ADHM moduli spaces with the solution of the elliptic Ruijsenaars-Schneider model.
description: 31 pages, 3 figures, to appear in Communications in Mathematical Physics
D7.5 Public Communication Materials
Creators: name: GLOMICAVE PARTNERS
Publisher: name: Zenodo
Year: 2022

description: EUT is responsible for designing and implementing the GLOMICAVE communication strategy through its Research Communications Office, but all consortium partners are involved in it.  This deliverable explains and details the communication materials that have been prepared from M1-M18 including among others, the development of project’s visual identity, the production of digital dissemination and promotional materials and project website, social media activity and press release written. 
description: The GLOMICAVE project has received funding from the European Union's Horizon 2020 research and innovation programme under grant agreement No. 952908
Searching for Materials with High Refractive Index and Wide Band Gap: A First-Principles High-Throughput Study
Creators: name: Naccarato, Francesco
name: Ricci, Francesco
name: Suntivich, Jin
name: Hautier, Geoffroy
name: Wirtz, Ludger
name: Rignanese, Gian-Marco
Publisher: name: arXiv
Year: 2018
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Computational Physics (physics.comp-ph)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Materials combining both a high refractive index and a wide band gap are of great interest for optoelectronic and sensor applications. However, these two properties are typically described by an inverse correlation with high refractive index appearing in small gap materials and vice-versa. Here, we conduct a first-principles high-throughput study on more than 4000 semiconductors (with a special focus on oxides). Our data confirm the general inverse trend between refractive index and band gap but interesting outliers are also identified. The data are then analyzed through a simple model involving two main descriptors: the average optical gap and the effective frequency. The former can be determined directly from the electronic structure of the compounds, but the latter cannot. This calls for further analysis in order to obtain a predictive model. Nonetheless, it turns out that the negative effect of a large band gap on the refractive index can counterbalanced in two ways: (i) by limiting the difference between the direct band gap and the average optical gap which can be realized by a narrow distribution in energy of the optical transitions and (ii) by increasing the effective frequency which can be achieved through either a high number of transitions from the top of the valence band to the bottom of the conduction or a high average probability for these transitions. Focusing on oxides, we use our data to investigate how the chemistry influences this inverse relationship and rationalize why certain classes of materials would perform better. Our findings can be used to search for new compounds in many optical applications both in the linear and non-linear regime (waveguides, optical modulators, laser, frequency converter, etc.).
description: The manuscript is made of 10 pages with 6 figures and 1 table. At the end of the main text, there is an appendix with 2 figures. Supplemental material includes 7 figures and 6 tables. In the db.csv file there are the materials properties we computed in this work
Instability Proof for Einstein-Yang-Mills Solitons and Black Holes with Arbitrary Gauge Groups
Creators: name: Brodbeck, Othmar
name: Straumann, Norbert
Publisher: name: arXiv
Year: 1994
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We prove that static, spherically symmetric, asymptotically flat soliton and black hole solutions of the Einstein-Yang-Mills equations are unstable for arbitrary gauge groups, at least for the ``generic" case. This conclusion is derived without explicit knowledge of the possible equilibrium solutions.
description: 26 pages, LATEX, no figures
Short-Term Ecological Impact of the Flores Timur Marine Protected Area, Summary Report 2018
Creators: name: D.A. Andradi-Brown
name: Amkieltiela Amkieltiela
name: F. Firmansyah
name: Estradivari Estradivari
name: M. Barnes
name: L. Veverka
name: G.N. Ahmadia
Publisher: name: figshare
Year: 2018
Subjects: subject: 50202 Conservation and Biodiversity
subject: FOS: Biological sciences
subject: Marine Biology

description: We report on short-term ecological impacts from the Flores Timur MPA, in central Indonesia, based on monitoring conducted in 2014 and 2017. Flores Timur MPA was initiated in 2013, but has not yet been formally established with a zonation plan, and so all areas of the MPA are open to sustainable fishing. Our results suggest that hard coral cover, fish function group (herbivore) biomass, and key fisheries species biomass has increased in the MPA. We find limited evidence that the MPA is having a positive impact on ecological conditions using a matched-control sites impact evaluation framework. This lack of impact is unsurprising given the short time period (three years), and that formal zonation has not yet been completed. Given a longer period of time, and continued MPA management actions focused on building MPA effectiveness, it is likely that the MPA performance will increase.
Notonecta glauca Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Notonectidae
Notonecta
Notonecta glauca

description: Notonecta glauca [spec. nov.]
N. grisea, elytris griseis margine fusco punctatis. Fn. svec. 688.
Frisch. ins. 6. p. 28. t. 13. @/ Bradl. nat. t. 26. f. 2. E.
Pet. gaz. t. 72. f. 5. @/ Roes. ins. app. 1. p. 165. t. 27.
Habitat in Europae Aquis.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 439, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
Cicada aurata Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Cicadellidae
Cicada
Cicada aurata

description: Cicada aurata [spec. nov.]
C. flava, elytris fulvo pictis: maculis quatuor nigris posticeque auratis. Fn. svec. 635.
Habitat in Europa.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 439, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
Nepa Linnaeus, 1758, gen. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Nepidae
Nepa

description: Nepa [gen. nov.]
Rostrum inflexum.
Autennae ...
Alae IV, cruciato-complicatae: antice coriaceae.
Pedes anteriores cheliformes; reliqui 4 ambulatorii.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 440, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
Stochastic dynamics and Fokker-Planck equation in accelerator physics
Creators: name: Mais, H.
name: Zorzano, M. P.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Accelerator Physics (physics.acc-ph)
subject: FOS: Physical sciences

description: The aim of this contribution is to study the particle dynamics in a storage ring under the influence of noise. Some simplified stochastic beam dynamics problems are treated by solving the corresponding Fokker-Planck equations numerically.
description: 11 pages Latex, 6 figures (eps)
title: ADCO, Cart. 186 (11 H 71), f. 0404r
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CBMA/CG21/F.PETOT/2012
name: Petot, Frédéric
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: cartulaire
subject: LaMOP

description: Cartulaire général de Cîteaux, dit de Jean de Cirey, t. II (XVe siècle), tome II, Archives départementales de la Côte-d'Or, C
art. 186 (11 H 71). Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire général de Cîteaux, dit de Jean de Cirey, t. II (XVe siècle), tome II, Archives départementales de la
 Côte-d'Or, Cart. 186 (11 H 71), f. 0404r, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https://manuscrits.cbma-
project.eu/
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
Additional file 4 of Use of proteomics to identify mechanisms of hepatocellular carcinoma with the CYP2D6*10 polymorphism and identification of ANGPTL6 as a new diagnostic and prognostic biomarker
Creators: name: Hu, Guiming
name: Gao, Fei
name: Wang, Guanzhe
name: Fang, Yan
name: Guo, Yuanyuan
name: Zhou, Jun
name: Gu, Yuhan
name: Zhang, Cunzhen
name: Gao, Na
name: Wen, Qiang
name: Qiao, Hailing
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Virology

description: Additional file 4: Table S4. Compared with healthy subjects, the 17 upregulated and 71 downregulated DEPs in HCC groups based on proteomics analysis.
เนื้อหาและการใช้คำสื่ออารมณ์ขันในรายการ "เทยเที่ยวไทย"
Creators: name: พัชรีย์ จำปา
Publisher: name: คณะมนุษยศาสตร์และสังคมศาสตร์ มหาวิทยาลัยราชภัฏบ้านสมเด็จเจ้าพระยา
Year: 2559
Subjects: Humor, Language and Communication, Words Expressing, การใช้คำ, ภาษาและการสื่อสาร, อารมณ์ขัน

description: วารสารมนุษยศาสตร์และสังคมศาสตร์ มหาวิทยาลัยราชภัฏบ้านสมเด็จเจ้าพระยา, 10, 1, 1.-22
Lsdiff M and the Einstein Equations
Creators: name: Grant, James D. E.
Publisher: name: arXiv
Year: 1994
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We give a formulation of the vacuum Einstein equations in terms of a set of volume-preserving vector fields on a four-manifold ${\cal M}$. These vectors satisfy a set of equations which are a generalisation of the Yang-Mills equations for a constant connection on flat spacetime.
description: 5 pages, no figures, Latex, uses amsfonts, amssym.def and amssym.tex. Note added on more direct connection with Yang-Mills equations
Nepa rubra Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Nepidae
Nepa
Nepa rubra

description: Nepa rubra [spec. nov.]
N. fusca, abdomine supra alarumque nervis rubris. M. L. U.
Habitat in Calidis regionibus.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 440, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
Deriving the Hubble constant using Planck and XMM-Newton observations of galaxy clusters
Creators: name: Kozmanyan, Arpine
name: Bourdin, Hervé
name: Mazzotta, Pasquale
name: Rasia, Elena
name: Sereno, Mauro
Publisher: name: arXiv
Year: 2018
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: The possibility of determining the value of the Hubble constant using observations of galaxy clusters in X-ray and microwave wavelengths through the Sunyaev Zeldovich (SZ) effect has long been known. Previous measurements have been plagued by relatively large errors in the observational data and severe biases induced, for example, by cluster triaxiality and clumpiness. The advent of \textit{Planck} allows us to map the Compton parameter y, that is, the amplitude of the SZ effect, with unprecedented accuracy at intermediate cluster-centric radii, which in turn allows performing a detailed spatially resolved comparison with X-ray measurements. Given such higher quality observational data, we developed a Bayesian approach that combines informed priors on the physics of the intracluster medium obtained from hydrodynamical simulations of massive clusters with measurement uncertainties. We apply our method to a sample of 61 galaxy clusters with redshifts up to z < 0.5 observed with Planck and XMM-Newton observations and find H_0=67 \pm 3 km s^{-1} Mpc^{-1}.
description: 15 pages, 9 figures, accepted for publication by A&A
Geometry of Deformations of Relativistic Membranes
Creators: name: Capovilla, Riccardo
name: Guven, Jemal
Publisher: name: arXiv
Year: 1994
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: A kinematical description of infinitesimal deformations of the worldsheet spanned in spacetime by a relativistic membrane is presented. This provides a framework for obtaining both the classical equations of motion and the equations describing infinitesimal deformations about solutions of these equations when the action describing the dynamics of this membrane is constructed using {\it any} local geometrical worldsheet scalars. As examples, we consider a Nambu membrane, and an action quadratic in the extrinsic curvature of the worldsheet.
description: 20 pages, Plain Tex, sign errors corrected, many new references added. To appear in Physical Review D
Notonecta striata Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Notonectidae
Notonecta
Notonecta striata

description: Notonecta striata [spec. nov.]
N. elytris pallidis; lineolis transversis undulatis striatis. Fn. svec. 689.
Pet. gaz. t. 72. f. 7. Notonecta vulgaris compressa fusca.
Roes. ins. app. 1. p. 177. t. 29.
Joblot, micr. 1. pp. 1. t. 7. f. 2, 3.
Habitat in Europae Aquis.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 439, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206