cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Building the AusTraits Plant Dictionary into a formal vocabulary
Creators: name: Wenk, Elizabeth
Publisher: name: ARDC
Year: 2023
Subjects: Vocabularies, terminologies, semantic

description: The AusTraits Plant Dictionary (APD) is the most complete formal vocabulary for ecological plant trait concepts, offering a resource for all researchers seeking semantically clear, well-defined plant trait definitions to apply to other datasets or reuse in other vocabularies. Without formal trait concepts, distinct datasets cannot be linked, limiting their reuse. The trait concepts were initially informal definitions required to compile the AusTraits database, a large, open-source, harmonised database of Australian plant trait data. Having a formal vocabulary of trait concepts is essential for the interpretation of the trait values within AusTraits, necessitating the transformation of the initial resource into a formal vocabulary, output in both human-friendly and machine-readable formats. This required three core steps, 1) Review of all trait concepts, trait definitions, and allowable categorical trait values; 2) Addition of metadata to each trait concept; 3) Building the trait dictionary into an rdf representation with resolvable URI's for each trait concept and categorical trait value. Metadata for each trait include a trait label, trait definition, units, allowable ranges (for numeric traits), allowable values (for categorical traits), structure measured, characteristic measured, keywords, references, reviewers, and links to identical/similar/related concepts in other trait dictionaries and databases. R scripts were developed to build the rdf representation from spreadsheets, offering a transparent, reproducible workflow that is intuitive to most ecology researchers and allowing new traits to easily be added to the vocabulary. 
Version note
Corrects a formatting error in the original presentation file introduced during file conversion.
Evaluation of Hylleraas-CI atomic integrals by integration over the coordinates of one electron. IV. An improved algorithm for three-electron kinetic energy integrals
Creators: name: Ruiz, Maria Belen
Publisher: name: arXiv
Year: 2012
Subjects: subject: Atomic Physics (physics.atom-ph)
subject: FOS: Physical sciences

description: An improved algorithm to evaluate the nonrelativistic three-electron Hylleraas-Configuration Interaction (Hy-CI) kinetic energy integrals over Slater orbitals and the Hamiltonian in Hylleraas coordinates is shown. The resulting analytical expressions are general for all quantum numbers of the orbitals. From there, the restriction of employing orbitals with quantum numbers $l \le 2$ of the above algorithm presented in paper I of this series has been removed. With the new algorithm it is possible, in the direct integration method described in this series, to carry out Hy-CI atomic structure calculations including $f$-, $g$-, $\ldots$ , $l$ and higher angular-momentum Slater orbitals and to determine $F$, $G$, $\ldots$ , $L$ and states of higher order symmetry.
description: 32 pages, 14 references, 1 figure and 1 table, Journal of Mathematical Chemistry, January 2016
title: SCRITTI SCELTI DI DIRITTO ROMANO. Volume 3
Creators: name: Cannata, Carlo Augusto
Publisher: name: Giappichelli
Year: 2014

description: I tre volumi raccolgono i più importanti saggi di Carlo Augusto Cannata (1934-2019), emerito di diritto romano nell’Università di Milano. Seguendo le orme del suo maestro Giovanni Pugliese, Cannata ha sempre tenuto insieme le dimensioni del diritto romano, del diritto civile e del diritto comparato. Fra le sue molteplici monografie vanno ricordate: “Lineamenti di una storia della giurisprudenza europea”, “Per una storia della scienza giuridica europea”, “Sul problema della responsabilità nel diritto privato romano”, “L’inadempimento delle obbligazioni”. I volumi sono stati curati da Letizia Vacca, che di Cannata fu allieva nel suo periodo cagliaritano.
Building the AusTraits Plant Dictionary into a formal vocabulary
Creators: name: Wenk, Elizabeth
Publisher: name: ARDC
Year: 2023
Subjects: Vocabularies, terminologies, semantic

description: The AusTraits Plant Dictionary (APD) is the most complete formal vocabulary for ecological plant trait concepts, offering a resource for all researchers seeking semantically clear, well-defined plant trait definitions to apply to other datasets or reuse in other vocabularies. Without formal trait concepts, distinct datasets cannot be linked, limiting their reuse. The trait concepts were initially informal definitions required to compile the AusTraits database, a large, open-source, harmonised database of Australian plant trait data. Having a formal vocabulary of trait concepts is essential for the interpretation of the trait values within AusTraits, necessitating the transformation of the initial resource into a formal vocabulary, output in both human-friendly and machine-readable formats. This required three core steps, 1) Review of all trait concepts, trait definitions, and allowable categorical trait values; 2) Addition of metadata to each trait concept; 3) Building the trait dictionary into an rdf representation with resolvable URI's for each trait concept and categorical trait value. Metadata for each trait include a trait label, trait definition, units, allowable ranges (for numeric traits), allowable values (for categorical traits), structure measured, characteristic measured, keywords, references, reviewers, and links to identical/similar/related concepts in other trait dictionaries and databases. R scripts were developed to build the rdf representation from spreadsheets, offering a transparent, reproducible workflow that is intuitive to most ecology researchers and allowing new traits to easily be added to the vocabulary.
Rigid HYM Connections on Tautological Bundles over ALE Crepant Resolutions in Dimension Three
Creators: name: Degeratu, Anda
name: Walpuski, Thomas
Publisher: name: arXiv
Year: 2012
Subjects: subject: Differential Geometry (math.DG)
subject: Algebraic Geometry (math.AG)
subject: FOS: Mathematics

description: For $G$ a finite subgroup of ${\rm SL}(3,{\mathbb C})$ acting freely on ${\mathbb C}^3{\setminus} \{0\}$ a crepant resolution of the Calabi-Yau orbifold ${\mathbb C}^3\!/G$ always exists and has the geometry of an ALE non-compact manifold. We show that the tautological bundles on these crepant resolutions admit rigid Hermitian-Yang-Mills connections. For this we use analytical information extracted from the derived category McKay correspondence of Bridgeland, King, and Reid [J. Amer. Math. Soc. 14 (2001), 535-554]. As a consequence we rederive multiplicative cohomological identities on the crepant resolution using the Atiyah-Patodi-Singer index theorem. These results are dimension three analogues of Kronheimer and Nakajima's results [Math. Ann. 288 (1990), 263-307] in dimension two.
Injury determinations for cetaceans observed interacting with Hawaii and American Samoa longline fisheries during 2008-2012
Creators: name: Bradford, Amanda L.
name: Forney, Karin A.
Publisher: name: U.S. Department of Commerce, National Oceanic and Atmospheric Administration, National Marine Fisheries Service, Pacific Islands Fisheries Science Center
Year: 2014
Subjects: subject: Cetacea--Conservation--Hawaii
subject: Cetacea--Conservation--American Samoa
subject: Cetacea--Wounds and injuries--Effect of fishing on--Hawaii
subject: Cetacea--Wounds and injuries--Effect of fishing on--American Samoaii

description: Cetacean interactions (i.e., hookings and entanglements) with the Hawaii and American Samoa longline fisheries observed during 2008 - 2012 were compiled, and the number of cetacean deaths, serious injuries, and non-serious injuries by fishery, species, and management area were assessed. These values form the basis of the mortality and serious injury estimates included in the stock assessment reports of stocks impacted by these fisheries. Injury determinations were made using a revised process for distinguishing serious from non-serious injuries (National Marine Fisheries Service, 2012). In the Hawaii deep-set fishery, 47 cetacean interactions were observed from 2008 to 2012; most involved false killer whales (48.9%), resulted in death or serious injury (74.5%), and occurred outside the U.S. exclusive economic zone, or EEZ (53.2%). In the Hawaii shallow-set fishery, 43 cetacean interactions were observed from 2008 to 2012; most involved Risso's dolphins (41.9%), resulted in death or serious injury (67.4%), and occurred outside the U.S. EEZ (90.7%). In the American Samoa deep-set fishery, 14 cetacean interactions were observed from 2008 to 2012; most involved rough-toothed dolphins (42.9%), resulted in death or serious injury (92.9%), and occurred within the U.S. EEZ (85.7 %).
Rank-3 root systems induce root systems of rank 4 via a new Clifford spinor construction
Creators: name: Dechant, Pierre-Philippe
Publisher: name: arXiv
Year: 2012
Subjects: subject: Mathematical Physics (math-ph)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences
subject: 52B10, 52B12, 52B15, 15A66, 20F55, 17B22

description: In this paper, we show that via a novel construction every rank-3 root system induces a root system of rank 4. Via the Cartan-Dieudonné theorem, an even number of successive Coxeter reflections yields rotations that in a Clifford algebra framework are described by spinors. In three dimensions these spinors themselves have a natural four-dimensional Euclidean structure, and discrete spinor groups can therefore be interpreted as 4D polytopes. In fact, we show that these polytopes have to be root systems, thereby inducing Coxeter groups of rank 4, and that their automorphism groups include two factors of the respective discrete spinor groups trivially acting on the left and on the right by spinor multiplication. Special cases of this general theorem include the exceptional 4D groups $D_4$, $F_4$ and $H_4$, which therefore opens up a new understanding of applications of these structures in terms of spinorial geometry. In particular, 4D groups are ubiquitous in high energy physics. For the corresponding case in two dimensions, the groups $I_2(n)$ are shown to be self-dual, whilst via a similar construction in terms of octonions each rank-3 root system induces a root system in dimension 8; this root system is in fact the direct sum of two copies of the corresponding induced 4D root system.
description: 7 pages. arXiv admin note: text overlap with arXiv:1205.1451
Water-Dispersible, Magnetically Recyclable Heterogeneous Cobalt Catalyst for C–C and C–N Cross-Coupling Reactions in Aqueous Media
Creators: name: Sheikh, Safoora
name: Bhattacharyya, Aditya
name: Henriquez, Marco A.
name: Nasseri, Mohammad Ali
name: Chahkandi, Mohammad
name: Allahresani, Ali
name: Reiser, Oliver
Publisher: name: Universität Regensburg
Year: 2024
Subjects: subject: Anions; Catalysts; Cobalt; Cross coupling reaction; Organic compounds
subject: 540 Chemie

description: A cobalt catalyst supported on an iron oxide core,
denoted as γ-Fe2O3@PEG@THMAM-Co, has been prepared and
characterized by Fourier transform infrared spectroscopy, X-ray
diffraction, field emission scanning electron microscopy, transmission
electron microscopy, energy-dispersive X-ray mapping,
thermogravimetry differential thermogravimetry, vibrating sample
magnetometry, and inductively coupled plasma. Polyhydroxy end
groups in the shell make the catalyst particles dispersible in water,
allowing Hiyama, Suzuki, and C−N cross-coupling reactions of aryl
iodides and bromides. The catalyst could be recovered by magnetic
decantation and reused for at least five successive runs with a
negligent decrease in its activity or changes in its morphology.
Water as a solvent without requiring additives, surfactants, or
organic co-solvents, as well as an abundant and low-cost cobalt catalyst combined with facile recovery, low leaching, and scalability,
provides an environmentally and economically attractive alternative to established palladium-catalyzed C−C and C−N coupling
reactions.
William MacAskill: What We Owe the Future: A Million-Year View
Creators: name: Clover, Grace
Publisher: name: Intergenerational Justice Review
Year: 2023

description: William MacAskill (2022): What We Owe the Future: A Million-Year View
description: Intergenerational Justice Review, Vol. 8 No. 1 (2022): Existential and unknown risks for future generations (I)
Does longtermism depend on questionable forms of aggregation?
Creators: name: Moreno, Marina
Publisher: name: Intergenerational Justice Review
Year: 2023

description: We are constantly making choices about how to invest our time and resources. From a moral perspective, we must ask which moral concerns are most deserving of our attention. Longtermism, as e.g. defined by Greaves and MacAskill, holds that our moral focus should be on the long-term future, and that current and medium-term moral problems are comparatively insignificant. This theory is centrally based on the assumption that the moral importance of individuals can be aggregated. Since the number of individuals of future generations far exceeds the number of current individuals and those closer in time, future generations are to be morally prioritised, according to longtermism. This paper explores the implications of rejecting the premise of moral aggregation of individuals and adopting a strongly non-aggregationist position instead. It is argued that, according to strong non-aggregationism, the magnitude of the probability with which our intervention actually make a difference, as well as whether we look at the available interventions from an ex ante or ex post perspective, are relevant factors in their moral assessment. Ultimately, the conclusion is reached that strong non-aggregationism does likely not support strongly longtermist conclusions.
description: Intergenerational Justice Review, Vol. 8 No. 1 (2022): Existential and unknown risks for future generations (I)
Gamma-ray emission from globular clusters
Creators: name: Tam, P. H. Thomas
name: Hui, C. Y.
name: Kong, Albert K H.
Publisher: name: arXiv
Year: 2012
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: Over the last few years, the data obtained using the Large Area Telescope (LAT) aboard the Fermi Gamma-ray Space Telescope has provided new insights on high-energy processes in globular clusters, particularly those involving compact objects such as Millisecond Pulsars (MSPs). Gamma-ray emission in the 100 MeV to 10 GeV range has been detected from more than a dozen globular clusters in our galaxy, including 47 Tucanae and Terzan 5. Based on a sample of known gamma-ray globular clusters, the empirical relations between gamma-ray luminosity and properties of globular clusters such as their stellar encounter rate, metallicity, and possible optical and infrared photon energy densities, have been derived. The measured gamma-ray spectra are generally described by a power law with a cut-off at a few gigaelectronvolts. Together with the detection of pulsed gamma-rays from two MSPs in two different globular clusters, such spectral signature lends support to the hypothesis that gamma-rays from globular clusters represent collective curvature emission from magnetospheres of MSPs in the clusters. Alternative models, involving Inverse-Compton (IC) emission of relativistic electrons that are accelerated close to MSPs or pulsar wind nebula shocks, have also been suggested. Observations at >100 GeV by using Fermi/LAT and atmospheric Cherenkov telescopes such as H.E.S.S.-II, MAGIC-II, VERITAS, and CTA will help to settle some questions unanswered by current data.
description: 11 pages, 7 figures, 2 tables, J. Astron. Space Sci., in press
Injury determinations for cetaceans observed interacting with Hawaii and American Samoa longline fisheries during 2007-2011
Creators: name: Bradford, Amanda L.
name: Forney, Karin A.
Publisher: name: U.S. Department of Commerce, National Oceanic and Atmospheric Administration, National Marine Fisheries Service, Pacific Islands Fisheries Science Center
Year: 2014
Subjects: subject: Cetacea--Conservation--Hawaii
subject: Cetacea--Conservation--American Samoa
subject: Cetacea--Wounds and injuries--Effect of fishing on--Hawaii
subject: Cetacea--Wounds and injuries--Effect of fishing on--American Samoaii

description: Cetacean interactions (i.e., hookings and entanglements) with the Hawaii and American Samoa longline fisheries observed during 2007 - 2011 were compiled, and the number of cetacean deaths, serious injuries, and non-serious injuries by fishery, species, and management area were assessed. These values form the basis of the mortality and serious injury estimates included in the stock assessment reports of stocks impacted by these fisheries. Injury determinations were made using a revised process for distinguishing serious from non-serious injuries (National Marine Fisheries Service, 2012). In the Hawaii deep-set fishery, 50 cetacean interactions were observed from 2007 to 2011; most involved false killer whales (48.0%), resulted in death or serious injury (73.5%), and occurred outside the U.S. exclusive economic zone, or EEZ (54.0%). In the Hawaii shallow-set fishery, 46 cetacean interactions were observed from 2007 to 2011; most involved Risso's dolphins (45.7%), resulted in death or serious injury (77.2%), and occurred outside the U.S. EEZ (91.3%). In the American Samoa deep-set fishery, 14 cetacean interactions were observed from 2007 to 2011; most involved rough-toothed dolphins (42.9%), resulted in death or serious injury (92.9%), and occurred within the U.S. EEZ (85.7%).
Learning a nonlinear dynamical system model of gene regulation: A perturbed steady-state approach
Creators: name: Bradley, Arwen Vanice
name: Li, Ye Henry
name: Choi, Bokyung
name: Wong, Wing Hung
Publisher: name: arXiv
Year: 2012
Subjects: subject: Molecular Networks (q-bio.MN)
subject: Applications (stat.AP)
subject: FOS: Biological sciences
subject: FOS: Computer and information sciences

description: Biological structure and function depend on complex regulatory interactions between many genes. A wealth of gene expression data is available from high-throughput genome-wide measurement technologies, but effective gene regulatory network inference methods are still needed. Model-based methods founded on quantitative descriptions of gene regulation are among the most promising, but many such methods rely on simple, local models or on ad hoc inference approaches lacking experimental interpretability. We propose an experimental design and develop an associated statistical method for inferring a gene network by learning a standard quantitative, interpretable, predictive, biophysics-based ordinary differential equation model of gene regulation. We fit the model parameters using gene expression measurements from perturbed steady-states of the system, like those following overexpression or knockdown experiments. Although the original model is nonlinear, our design allows us to transform it into a convex optimization problem by restricting attention to steady-states and using the lasso for parameter selection. Here, we describe the model and inference algorithm and apply them to a synthetic six-gene system, demonstrating that the model is detailed and flexible enough to account for activation and repression as well as synergistic and self-regulation, and the algorithm can efficiently and accurately recover the parameters used to generate the data.
description: Published in at http://dx.doi.org/10.1214/13-AOAS645 the Annals of Applied Statistics (http://www.imstat.org/aoas/) by the Institute of Mathematical Statistics (http://www.imstat.org)
Toby Ord: The Precipice: Existential Risk and the Future of Humanity
Creators: name: Soydan, Tolga
Publisher: name: Intergenerational Justice Review
Year: 2023

description: Toby Ord (2020): The Precipice: Existential Risk and the Future of Humanity
description: Intergenerational Justice Review, Vol. 8 No. 1 (2022): Existential and unknown risks for future generations (I)
title: Ward nurses’ role during rapid response activation for patient deterioration: a scoping review protocol
Creators: name: , Farida.Saghafi@Utas.Edu.Au
name: KALJEH, HEBAH
name: Greenwood, Melanie
Publisher: name: OSF Registries
Year: 2023
Subjects: subject: Medicine and Health Sciences
subject: CLINICAL DETERIORATION
subject: RAPID RESPONSE SYSTEM
subject: RAPID RESPONSE TEAM
subject: WARD NURSES

description: This review aims to explore and map literature on ward nurse’s role and responsibilities during rapid response team (RRT) activations to address knowledge gaps and propose future research recommendations.
What if the computer crashes? Findings from an exploratory factor analysis on stressors in online exams
Creators: name: Jeitziner, Loris Tizian
name: Roos, Anna-Lena
name: Ruf, Alessia
name: Zahn, Carmen
Publisher: name: My University
Year: 2022
Subjects: subject: E-assessment
subject: education
subject: stressors
subject: 003 - Systeme

description: The pandemic has forced higher education to shift from onsite to online environments. This novel situation may increase students’ exam stress and induce new stressors. In the present study, we identified stressors in online exams by conducting an exploratory factor analysis of a novel questionnaire. The analysis revealed five factors that categorize students’ experience of stress. Preliminary descriptive results suggest that possible system failures and social pressures cause the highest stress for students.
Extinction risks and resilience: A perspective on existential risks research with nuclear war as an exemplary threat
Creators: name: Kattan, Johannes
Publisher: name: Intergenerational Justice Review
Year: 2023

description: A growing awareness of potential global catastrophes has recently given increased attention to the topic of existential risks. To date, there is still very limited consensus on the definition of existential risk, the likelihood of those risks, and their ethical implications. To achieve more clarity, it is proposed here that extinction risks should be discerned more clearly from other aspects of existential risks. Nuclear war is taken as a prime example to illustrate an extinction risk and to discuss humanity’s resilience to such threats. It is concluded that it is unlikely that a nuclear war would lead to the end of the human species, despite the unprecedented damage it might cause. Further, some of the ethical aspects of longtermism and the communication of existential risks are discussed.
description: Intergenerational Justice Review, Vol. 8 No. 1 (2022): Existential and unknown risks for future generations (I)
Some sharp Hodge Laplacian and Steklov eigenvalue estimates for differential forms
Creators: name: Kwong, Kwok-Kun
Publisher: name: arXiv
Year: 2012
Subjects: subject: Differential Geometry (math.DG)
subject: FOS: Mathematics
subject: 53C20, 53C24, 53C40

description: We give some sharp lower bounds of the first eigenvalue for the Hodge Laplacian acting on differential forms on the boundary of a Riemannian manifold. We also give some sharp estimates for the first nonzero Steklov eigenvalue for differential forms.
description: Largely rewritten. Section 3 removed as some of the results have been improved and recorded in other papers by the author. Only results in Section 4 retained
AusGeochem: Providing a FAIR research vocabulary for geochemical data for the Australian and international community
Creators: name: Nixon, Angus
name: Halimulati, Ananuer
name: Armistead, Sheree
name: Boone, Samuel
name: Chen, Bei
name: Dalton, Hayden
name: Dux, Florian
name: Greau, Yoann
name: Hodgekiss, Sally-Ann
name: Kohlmann, Fabian
name: Kohn, Barry
name: Koutamanis, Dafne
name: McInnes, Brent
name: McMillan, Malcolm
name: Noble, Wayne
name: Prent, Alexander
name: Theile, Moritz
name: Wang, Xueying
name: Ware, Bryant
name: Zhou, Renjie
Publisher: name: ARDC
Year: 2023
Subjects: Vocabularies
Terminologies
Semantic

description: The AuScope Geochemistry Network (AGN) was established in 2019 in response to a community recognised need for improved organisation and coordination of Australian geochemistry laboratories and the ever increasing volumes of data routinely collected across a broad array of facilities and data types. This initiative spurred the creation of the AusGeochem platform, with the primary objective of developing and maintaining a FAIR geochemistry data ecosystem capable of hosting and interacting with diverse geochemistry and geochronology data types. AusGeochem has been designed, in partnership with Lithodat, to be used within the data collection, interpretation and pre-publication phases of research. This philosophy promotes the capture and visibility of all data generated within facilities, including data which is not published but retains scientific value to others in the community. Ultimately, it is the goal of the initiative to automate data capture where possible to facilitate upload directly from machines or processing software, to reduce human induced error and maximise data collection.For effective automated data sharing between institutions, researchers, and machines/processing software, thus improving the value and reusability of data. The AGN has produced a number of best practice data reporting schema and vocabularies for a variety of data types through consultation with expert advisory groups and, where available, following published community recommendations. Adherence to a logical, published vocabulary and schema is essential for data interoperability. Reporting templates for U-Pb, fission track, (U-Th-Sm)/He, Ar-Ar and major and trace geochemistry data, as well as for ICP-MS analytical methodology have now been established and will soon be discoverable through the Research Vocabularies Australia service. Vocabularies are available for the community to use directly or develop cross-walks for integration with other services, including government geological surveys and international repositories such as EarthChem, GEOROC and AstroMaterials, who are current collaborators through the international OneGeochemistry project.AcknowledgementsThe AuScope Geochemistry Network is supported by the Australian Government through the National Collaborative Research Infrastructure Strategy, NCRIS.
Forty years of research: recovery records of green turtles observed or originally tagged at French Frigate Shoals in the northwestern Hawaiian Islands, 1973-2013
Creators: name: Humburg, Irene Nurzia
name: Balazs, George H.
Publisher: name: U.S. Department of Commerce, National Oceanic and Atmospheric Administration, National Marine Fisheries Service, Pacific Islands Fisheries Science Center
Year: 2014
Subjects: subject: Green turtle--Conservation--Hawaii--French Frigate Shoals

description: In 1983 the publication of the NOAA Technical Memorandum titled 'Recovery records of adult green turtles observed or originally tagged at French Frigate Shoals, Northwestern Hawaiian Islands' authored by George Balazs included tagging and sighting data for 294 individual turtles witnessed in association with the Hawaiian green turtle's main rookery of French Frigate Shoals (FFS). Herein we bring that report up to date and include some novel ways to present the information gathered in more than 40 years of systematic monitoring at FFS . We used tagging and tag recovery data for the 5,806 turtles that have been encountered at FFS at least once including all age classes and both genders. We analyzed tag recovery data gathered from turtles that were encountered nesting, basking or stranded along the Hawaiian Islands' shorelines, as well as turtles that were captured during targeted ocean-capture field work expeditions. Furthermore, we examined some of the patterns that emerge from the data and chose a few ways to display them to highlight their exceptional value.
List of the relevant indicators for the assessment of the consciousness of broilers and turkeys after waterbath stunning
Creators: name: EURCAW-Poultry-SFA
Publisher: name: Zenodo
Year: 2021
Subjects: broiler
turkey
waterbath stunning
assessment of consciousness
animal-based indicators
resource-based indicators
management-based indicators

description: This deliverable identifies the legal requirements of the legislation and addresses their corresponding specific indicators for each requirement, classified as animal-based, resource-based and management-based indicators. The indicators have been retrieved from literature review and expert knowledge. Furthermore, the legal requirements without specific corresponding indicators have been identified. The search for missing specific indicators in national guidance and the assessment of validity of the key indicators identified here were reviewed in another document. This document is only delivering the indicators that can be directly linked with a specific legal requirement.
A Cosmology of a Trans-Planckian Theory and Dark Energy
Creators: name: Bolognesi, Stefano
Publisher: name: arXiv
Year: 2012
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We investigate a model based on a generalised version of the Fourier transform for curved space-time manifolds. This model is possible if the metric has an asymptotic flat region which allows a duality to be implement between coordinates and momenta, hence, the models's name, trans-Planckian. The theory and the action are based on the postulate of the absolute egalitarian relation between coordinates $x$ and momenta $p$. We show how to implement this construction in a cosmological setting, on a Friedman-Robertson-Walker metric background, where the asymptotic time infinity plays the role of the required asymptotic flat region. We discuss the effect of gravity, and, in particular, of the Hubble expansion of the universe scale factor on the Fourier map. The dual inflationary stage is responsible for making the dual sector of the action inaccessible at ordinary low energies. We propose a scenario in which an effective positive cosmological constant is caused by how the dual sector of the theory affects the equation of state for matter particles.
description: 36 pages, 10 figures, v2: revised version, to appear on IJMPD, v3,v4: minor corrections
Effect of bacteriocin RSQ01 on milk microbiota during pasteurized milk preservation (https://doi.org/10.3168/jds.2025-26395, Supplementary material)
Creators: name: Zhang, Qi-Lin
Publisher: name: figshare
Year: 2025
Subjects: classificationCode: 300605
subject: Food safety, traceability, certification and authenticity

description: Effect of bacteriocin RSQ01 on milk microbiota during pasteurized milk preservation (https://doi.org/10.3168/jds.2025-26395, Supplementary material)
2014 Operational stock assessments for Georges Bank winter flounder, Gulf of Maine winter flounder, and pollock.
Creators: name: Hendrickson, Lisa C.
name: Nitschke, Paul
name: Linton, Brian
Publisher: name: U.S. Department of Commerce, National Oceanic and Atmospheric Administration, National Marine Fisheries Service, Northeast Fisheries Science Center
Year: 2014
Subjects: subject: Fish stock assessment--Maine, Gulf of--Statistical methods
subject: Winter flounder--Maine, Gulf of--Management
subject: Pollock--Maine, Gulf of--Management

description: This document represents the findings of an Operational Assessment of Georges Bank winter flounder, Gulf of Maine winter flounder, and pollock. The meeting was held August 11-13, 2014 at the Northeast Fisheries Science Center, National Marine Fisheries Service, Woods Hole, MA. The Terms of Reference, following the guidance of the Assessment Oversight Panel, are restricted to updating the catch and survey data for each stock and application of the model used in the last benchmark assessment. For these assessments there were no changes in the previously used model formulation.
Applications Of Tensor And Non-Abelian Ray Transforms
Creators: name: Lionheart, William
name: Withers, Philip
name: Desai, Naeem
name: Schmidt, Søren
Publisher: name: Zenodo
Year: 2015
Subjects: tensor tomography
non-abelian tomography
transverse ray transform
x-ray strain tomography
neutron spin tomography

description: In this conference talk we consider the transverse ray transform on symmetric rank 2 tensor fields in three dimensional Euclidean space and give an explicit inversion formula for complete data and for data for lines parallel to three orthogonal directions. We show how this can be used to determine the strain in a polycrystalline material using a

synchrotron x-ray source.

We go on to consider the problem of determination of a magnetic field from neutron spin tomography data and show that this problem reduces to a non-abelian ray transform in the plane and that the solution is unique for sufficiently smooth magnetic fields.
Spacetime dynamics of spinning particles - exact electromagnetic analogies
Creators: name: Costa, L. Filipe O.
name: Natário, José
name: Zilhão, Miguel
Publisher: name: arXiv
Year: 2012
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Theory (hep-th)
subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: We compare the rigorous equations describing the motion of spinning test particles in gravitational and electromagnetic fields, and show that if the Mathisson-Pirani spin condition holds then exact gravito-electromagnetic analogies emerge. These analogies provide a familiar formalism to treat gravitational problems, as well as a means for comparing the two interactions. Fundamental differences are manifest in the symmetries and time projections of the electromagnetic and gravitational tidal tensors. The physical consequences of the symmetries of the tidal tensors are explored comparing the following analogous setups: magnetic dipoles in the field of non-spinning/spinning charges, and gyroscopes in the Schwarzschild, Kerr, and Kerr-de Sitter spacetimes. The implications of the time projections of the tidal tensors are illustrated by the work done on the particle in various frames; in particular, a reciprocity is found to exist: in a frame comoving with the particle, the electromagnetic (but not the gravitational) field does work on it, causing a variation of its proper mass; conversely, for "static observers," a stationary gravitomagnetic (but not a magnetic) field does work on the particle, and the associated potential energy is seen to embody the Hawking-Wald spin-spin interaction energy. The issue of hidden momentum, and its counterintuitive dynamical implications, is also analyzed. Finally, a number of issues regarding the electromagnetic interaction and the physical meaning of Dixon's equations are clarified.
description: 32+11 pages, 5 figures. Edited and further improved version, with new Section C.2 unveiling analogies for arbitrary spin conditions, and new Sec. 3.2.3 in the Supplement making connection to the post-Newtonian approximation; former Sec. III.B.4 and Appendix C moved to the (reshuffled) Supplement; references updated. The Supplement is provided in ancillary file. Matches the final published version
Conditional Cell-Penetrating Peptide Exposure as Selective Nanoparticle Uptake Signal
Creators: name: Walter, Melanie
name: Bresinsky, Merlin
name: Zimmer, Oliver
name: Pockes, Steffen
name: Goepferich, Achim
Publisher: name: Universität Regensburg
Year: 2024
Subjects: subject: nanoparticle targeting, polymer nanoparticles, polyarginine, TAT, nanoparticle surface charge, polycationic, charge-mediated uptake, sequential uptake
subject: 615 Pharmazie

description: A major bottleneck diminishing the therapeutic efficacy of various drugs is that only small proportions of the administered dose reach the site of action. One promising approach to increase the drug amount in the target tissue is the delivery via nanoparticles (NPs) modified with ligands of cell surface receptors for the selective identification of target cells. However, since receptor binding can unintentionally trigger intracellular signaling cascades, our objective was to develop a receptor-independent way of NP uptake. Cell-penetrating peptides (CPPs) are an attractive tool since they allow efficient cell membrane crossing. So far, their applicability is severely limited as their uptake-promoting ability is nonspecific. Therefore, we aimed to achieve a conditional CPP-mediated NP internalization exclusively into target cells. We synthesized different CPP candidates and investigated their influence on nanoparticle stability, ζ-potential, and uptake characteristics in a core–shell nanoparticle system consisting of poly(lactid-co-glycolid) (PLGA) and poly(lactic acid)-poly(ethylene glycol) (PLA10kPEG2k) block copolymers with CPPs attached to the PEG part. We identified TAT47–57 (TAT) as the most promising candidate and subsequently combined the TAT-modified PLA10kPEG2k polymer with longer PLA10kPEG5k polymer chains, modified with the potent angiotensin-converting enzyme 2 (ACE2) inhibitor MLN-4760. While MLN-4760 enables selective target cell identification, the additional PEG length hides the CPP during a first unspecific cell contact. Only after the previous selective binding of MLN-4760 to ACE2, the established spatial proximity exposes the CPP, triggering cell uptake. We found an 18-fold uptake improvement in ACE2-positive cells compared to unmodified particles. In summary, our work paves the way for a conditional and thus highly selective receptor-independent nanoparticle uptake, which is beneficial in terms of avoiding side effects.
Farmakoepidemiologisk undersøgelse af lægemiddelinteraktion mellem Paclitaxel og Clopidogrel, 2016-2017
Creators: Troels K. Bergmann
Publisher: name: Rigsarkivet
Year: 2023

description: Formålet er at undersøge lægemiddelinteraktionen mellem lægemidlerne Clopidogrel og Pacliataxel. Dette gøres ved hjælp af et eksperiment, der foretages på en kohorte. Data er et registerdataudtræk, der er foretaget i samarbejde med en række hospitaler i Danmark.  Der er to grupper i eksperimentet. Den ene gruppe er blevet udsat for både Pacliataxel og Clopidogrel. Den anden gruppe er blevet udsat for Pacliataxel og aspirin. Eksperimentet skal forsøge at afdække, hvorvidt lægemiddelrelationen giver en større sandsynlighed for neuropati.
Geoscience Australia Vocabularies as a FAIR'ly useful communication tool
Creators: name: Smith, Margie
name: Sedgmen, Lara
Publisher: name: ARDC
Year: 2023
Subjects: vocabularies
terminologies
semantic

description: Vocabularies or data dictionaries reflect agreed terms and their definitions as used by an organisation or domain specific community. Further, if the publisher of the vocabulary repository is trusted both in content and delivery, then it will support interoperability by allowing terms to be re-used or matched in other repositories.
Vocabularies published by GA are a relatively new communications tool and comprise three sub-types:
1. Controlled code lists
2. Glossaries or data dictionaries
3. Reference information
Currently the most important thing about vocabs at GA is in the creation of the vocab in the first place. We have many control lists in the building and needed a process for creating vocabs for non-technical users and a means to encourage consistency of understanding. Increasingly we have domain communities that are recognising the value of vocabularies and are interested in developing them.
Our vocabularies are being used as reference for terms in GA's catalogue and products such as web services. However, the machine-to-machine incorporation of vocabs into GA applications and databases is an aspiration - currently they are persistent but static reference objects. This presentation will cover the vocabulary publishing process at GA and a user's experience in managing a glossary to be used across government organisations.
GPGCD: An iterative method for calculating approximate GCD of univariate polynomials
Creators: name: Terui, Akira
Publisher: name: arXiv
Year: 2012
Subjects: subject: Commutative Algebra (math.AC)
subject: Symbolic Computation (cs.SC)
subject: FOS: Mathematics
subject: FOS: Computer and information sciences
subject: I.1.2; F.2.1; G.1.6
subject: 13P99, 68W30

description: We present an iterative algorithm for calculating approximate greatest common divisor (GCD) of univariate polynomials with the real or the complex coefficients. For a given pair of polynomials and a degree, our algorithm finds a pair of polynomials which has a GCD of the given degree and whose coefficients are perturbed from those in the original inputs, making the perturbations as small as possible, along with the GCD. The problem of approximate GCD is transfered to a constrained minimization problem, then solved with the so-called modified Newton method, which is a generalization of the gradient-projection method, by searching the solution iteratively. We demonstrate that, in some test cases, our algorithm calculates approximate GCD with perturbations as small as those calculated by a method based on the structured total least norm (STLN) method and the UVGCD method, while our method runs significantly faster than theirs by approximately up to 30 or 10 times, respectively, compared with their implementation. We also show that our algorithm properly handles some ill-conditioned polynomials which have a GCD with small or large leading coefficient.
description: Preliminary versions have been presented as doi:10.1145/1576702.1576750 and arXiv:1007.1834
$t$-Analog of $q$-Characters, Bases of Quantum Cluster Algebras, and a Correction Technique
Creators: name: Qin, Fan
Publisher: name: arXiv
Year: 2012
Subjects: subject: Quantum Algebra (math.QA)
subject: FOS: Mathematics
subject: 13F60

description: We first study a new family of graded quiver varieties together with a new $t$-deformation of the associated Grothendieck rings. This provides the geometric foundations for a joint paper by Yoshiyuki Kimura and the author. We further generalize the result of that paper to any acyclic quantum cluster algebra with arbitrary nondegenerate coefficients. In particular, we obtain the generic basis, the dual PBW basis, and the dual canonical basis. The method consists in a correction technique, which works for general quantum cluster algebras.
description: Journal version; 45 pages. Minor corrections; this article supports arXiv:1205.2066
Arbejdsgruppe D - FAIR4HE FAIR RDM kompetencematrix
Creators: name: Hüser, Falco
name: Buss, Mareike
name: Mihai, Hannah
name: Richter-Olesen, N. Thorbjørn
Publisher: name: Zenodo
Year: 2022

description: Oversigt over FAIR RDM kompetencematrix
Net-charge fluctuations in Pb-Pb collisions at $\sqrt{s_{\rm NN}}$ = 2.76 TeV
Creators: name: ALICE Collaboration
Publisher: name: arXiv
Year: 2012
Subjects: subject: Nuclear Experiment (nucl-ex)
subject: High Energy Physics - Experiment (hep-ex)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We report the first measurement of the net-charge fluctuations in Pb-Pb collisions at $\sqrt{s_{\rm NN}}$ = 2.76 TeV, measured with the ALICE detector at the CERN Large Hadron Collider. The dynamical fluctuations per unit entropy are observed to decrease when going from peripheral to central collisions. An additional reduction in the amount of fluctuations is seen in comparison to the results from lower energies. We examine the dependence of fluctuations on the pseudorapidity interval, which may account for the dilution of fluctuations during the evolution of the system. We find that the fluctuations at LHC are smaller compared to the measurements at the Relativistic heavy Ion Collider (RHIC), and as such, closer to what has been theoretically predicted for the formation of Quark-Gluon Plasma (QGP).
description: 12 pages, 4 captioned figures, authors from page 2-6, published version, figures at http://aliceinfo.cern.ch/ArtSubmission/node/2831
Case study 1: Ghost wrecks of the Anthropocene: An enduring toxic legacy of the Pacific war
Creators: name: Carter, Matthew
name: Meredith, A
name: Kohler, AC
name: Walter, R
name: Jeffery, B
name: Heersink, P
Publisher: name: La Trobe
Year: 2023
Subjects: classificationCode: 3705
subject: Geology
subject: FOS: Earth and related environmental sciences
classificationCode: 4105
subject: Pollution and contamination

description: No description supplied
Controlling Many-Body Quantum Chaos: Bose-Hubbard systems
Creators: name: Beringer, Lukas
name: Steinhuber, Mathias
name: Urbina, Juan Diego
name: Richter, Klaus
name: Tomsovic, Steven
Publisher: name: Universität Regensburg
Year: 2024
Subjects: subject: Quantum Control, Quantum Chaos, Ultra-cold atom gases, Bose Hubbard
subject: 530 Physik

description: This work develops a quantum control application of many-body quantum chaos for ultracold bosonic gases trapped in optical lattices. It is long known how to harness exponential sensitivity to changes in initial conditions for control purposes in classically chaotic systems. In the technique known as targeting, instead of a hindrance to control, the instability becomes a resource. Recently, this classical targeting has been generalized to quantum systems either by periodically countering the inevitable quantum state spreading or by introducing a control Hamiltonian, where both enable localized states to be guided along special chaotic trajectories toward any of a broad variety of desired target states. Only strictly unitary dynamics are involved; i.e. it gives a coherent quantum targeting. In this paper, the introduction of a control Hamiltonian is applied to Bose–Hubbard systems in chaotic dynamical regimes. Properly selected unstable mean field solutions can be followed particularly rapidly to states possessing precise phase relationships and occupancies. In essence, the method generates a quantum simulation technique that can access rather special states. The protocol reduces to a time-dependent control of the chemical potentials, opening up the possibility for application in optical lattice experiments. Explicit applications to custom state preparation and stabilization of quantum many-body scars are presented in one- and two-dimensional lattices (three-dimensional applications are similarly possible).
Enhancing Interoperability
of biological imaging data
Creators: name: Moore, Josh
Publisher: name: Zenodo
Year: 2025

description: Presentation given on the FoundingGIDE project during the Euro-BioImaging All Hands Nodes Meeting 2025

https://www.eurobioimaging.eu/events/euro-bioimaging-all-hands-nodes-meeting-2025/
description: NFDI4BIOIMAGE is funded by DFG grant number NFDI 46/1, project number 501864659.
Charge separation relative to the reaction plane in Pb-Pb collisions at $\sqrt{s_{\rm NN}}= 2.76$ TeV
Creators: name: ALICE Collaboration
Publisher: name: arXiv
Year: 2012
Subjects: subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: Measurements of charge dependent azimuthal correlations with the ALICE detector at the LHC are reported for Pb-Pb collisions at $\sqrt{s_{\rm NN}} = 2.76$ TeV. Two- and three-particle charge-dependent azimuthal correlations in the pseudo-rapidity range $|η| < 0.8$ are presented as a function of the collision centrality, particle separation in pseudo-rapidity, and transverse momentum. A clear signal compatible with a charge-dependent separation relative to the reaction plane is observed, which shows little or no collision energy dependence when compared to measurements at RHIC energies. This provides a new insight for understanding the nature of the charge dependent azimuthal correlations observed at RHIC and LHC energies.
description: 12 pages, 3 captioned figures, authors from page 2 to 6, published version, figures at http://aliceinfo.cern.ch/ArtSubmission/node/2866
Description of the considered validated indicators among the identified ones and associated methodology, broilers welfare on farm
Creators: name: EURCAW-Poultry-SFA
Publisher: name: Zenodo
Year: 2022
Subjects: broiler
indicators
methods of assessment

description: In this document, the indicators and methods of assessment are evaluated according to their validity, feasibility, and reliability to deliver useful information for official controls.
description: {"references": ["10.5281/zenodo.7436894"]}