cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Teratothyasides scutulatus Smit & Pesic 2009
Creators: name: Pešić, Vladimir
name: Smit, Harry
name: Mary, Nathalie
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Trombidiformes
Teratothyadidae
Teratothyasides
Teratothyasides scutulatus

description: Teratothyasides scutulatus Smit & Pesic, 2009
Material examined. Comoros, Mayotte: River Koualé, upstream, 12º48'19,5"S, 45º 09'49,7"E, alt. 135 m asl., 7- ix-2011, 1/0; ibid., 21-iv-2009, 1/0.
Distribution. Comoros.
description: Published as part of Pešić, Vladimir, Smit, Harry & Mary, Nathalie, 2015, Third contribution to the knowledge of water mites from the Comoros, with the description of two new species (Acari: Hydrachnidia), pp. 445-459 in Zootaxa 3964 (4) on page 446, DOI: 10.11646/zootaxa.3964.4.4, http://zenodo.org/record/237029
Appendix S1 from Fossilization can mislead analyses of phenotypic disparity
Creators: name: Smith, Thomas J.
name: Sansom, Robert S.
name: Pisani, Davide
name: Donoghue, Philip C. J.
Publisher: name: The Royal Society
Year: 2023
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Palaeontology (incl. Palynology)

description: Additional methodological details, supplementary tables, and supplementary figures.
STUDY OF FACTORS NEGATIVELY IMPACTING THE LONGEVITY OF ARCHITECTURAL MONUMENTS LOCATED IN UZBEKISTAN
Creators: name: OMONOVA DILNOZA FAYZIDDINOVNA
Publisher: name: Zenodo
Year: 2023
Subjects: Architecture, Monuments, Uzbekistan, Preservation, Deterioration, Cultural Heritage, Conservation, Maintenance, Environmental Degradation, Human Activity.

description: Abstract
This article examines the factors that negatively affect the longevity of architectural monuments located in Uzbekistan. The study uses a qualitative methodology, including archival research, expert interviews, and on-site observations. The results indicate that factors such as environmental degradation, human activity, and lack of maintenance contribute to the deterioration of these monuments. The discussion highlights the importance of preserving these cultural artifacts for future generations and suggests strategies for improving their longevity.
REVISÃO DOS PARASITAS E OUTROS AGENTES INFECCIOSOS QUE AFECTAM AS POPULAÇÕES IBÉRICAS DE UM CARNÍVORO SOCIAL – O TEXUGO EUROASIÁTICO (Meles meles, linnaues 1758)
Creators: name: Rosalino, Luís
Publisher: name: Revista Lusófona de Ciência e Medicina Veterinária
Year: 2010

description: O texugo euroasiático é um dos carnívoros ibéricos passível de funcionar como reservatório de algumas zoonoses que podem afectar os animais domésticos, outros animais silvestres ou o Homem, cuja ecologia (ex. sociabilização) promove a manutenção e dispersão de algumas patologias. A listagem dos parasitas e das doenças infecciosas que afectam este predador na Europa foi já profundamente detalhada, mas nesses trabalhos há uma ausência quase completa de referências às populações ibéricas. Assim, o presente estudo tem como objectivo efectuar uma revisão bibliográfica dos trabalhos que mencionem o texugo como hospedeiro de ectoparasitas ou reservatório de outros agentes infecciosos, nomeadamente, pulgas (ex. Pulex), carraças (ex. Ixodes), piolhos (ex. Trichodectes), helmintos (ex. Mastophorus), bactérias (ex. Mycobacterium) e protozoários (ex. Toxoplama).
description: Revista Lusófona de Ciência e Medicina Veterinária, v. 2 (2008)
Fault Tolerant Quantum Filtering and Fault Detection for Quantum Systems
Creators: name: Gao, Qing
name: Dong, Daoyi
name: Petersen, Ian R.
Publisher: name: arXiv
Year: 2015
Subjects: subject: Mathematical Physics (math-ph)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: This paper aims to determine the fault tolerant quantum filter and fault detection equation for a class of open quantum systems coupled to a laser field that is subject to stochastic faults. In order to analyze this class of open quantum systems, we propose a quantum-classical Bayesian inference method based on the definition of a so-called quantum-classical conditional expectation. It is shown that the proposed Bayesian inference approach provides a convenient tool to simultaneously derive the fault tolerant quantum filter and the fault detection equation for this class of open quantum systems. An example of two-level open quantum systems subject to Poisson-type faults is presented to illustrate the proposed method. These results have the potential to lead to a new fault tolerant control theory for quantum systems.
The Annotation Process in the Turkish Treebank
Creators: name: Nart B. Atalay
name: Oflazer, Kemal
name: Say, Bilge
Publisher: name: Figshare
Year: 2018
Subjects: subject: 80107 Natural Language Processing
subject: FOS: Computer and information sciences

description: We present a progress report of the Turkish Treebank concentrating on various aspects of its design and implementation. In addition to a review of the corpus compilation process and the design  of the annotation scheme, we describe the details of various pre-processing stages and the computer-assisted annotation process.
Significance in Gamma Ray Astronomy with Systematic Errors
Creators: name: Spengler, Gerrit
Publisher: name: arXiv
Year: 2015
Subjects: subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: The influence of systematic errors on the calculation of the statistical significance of a $γ$-ray signal with the frequently invoked Li and Ma method is investigated. A simple criterion is derived to decide whether the Li and Ma method can be applied in the presence of systematic errors. An alternative method is discussed for cases where systematic errors are too large for the application of the original Li and Ma method. This alternative method reduces to the Li and Ma method when systematic errors are negligible. Finally, it is shown that the consideration of systematic errors will be important in many analyses of data from the planned Cherenkov Telescope Array.
description: Accepted for publication in Astroparticle Physics
title: Cryptic female choice and gamete-mediated paternal effects in the context of interspecific hybridization
Creators: name: Lantiegne, Tyler
Publisher: name: Memorial University of Newfoundland
Year: 2021

description: The environment in which fertilization takes place can have significant effects on paternity and offspring development. Through cryptic female choice, females can bias paternity to benefit a particular male and “choose” the father of her clutch. These processes might affect offspring development through non-genetic gamete-mediated paternal effects. I chose to examine the impact of cryptic female choice on paternity and offspring development in an externally fertilizing taxa that readily hybridizes, Salmoninae. Hybridization can represent a bad outcome for females with far-reaching effects on offspring phenotype and development. Females can reduce hybridization through conspecific sperm preference, a mechanism of cryptic female choice. What is unknown is the magnitude of conspecific sperm preference and the extent of gamete-mediated parental effects in our study populations and how these effects change in relation to hybridization. Following previous work done with other populations of salmonids, I expected to find evidence for strong conspecific sperm preference and paternal effects. Here, I examined conspecific sperm preference in three species, native brook char (Salvelinus fontinalis) and Atlantic salmon (Salmo salar), and introduced and invasive brown trout (Salmo trutta) and found that while ovarian fluid influenced sperm behavior, this effect did not differ among species. However, while hybridization between Atlantic salmon and brown trout significantly affected offspring development, paternal effects derived from the fertilization environment did not. This implies that females can alter paternity through cryptic female choice without consequences to the offspring. More research is needed in this and other salmonid species and populations to determine if these effects are present across salmonids.
Selective protected state preparation of coupled dissipative quantum emitters
Creators: name: Plankensteiner, David
name: Ostermann, Laurin
name: Ritsch, Helmut
name: Genes, Claudiu
Publisher: name: arXiv
Year: 2015
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Inherent binary or collective interactions in ensembles of quantum emitters induce a spread in the energy and lifetime of their eigenstates. While this typically causes fast decay and dephasing, in many cases certain special entangled collective states with minimal decay can be found, which possess ideal properties for spectroscopy, precision measurements or information storage. We show that for a specific choice of laser frequency, power and geometry or a suitable configuration of control fields one can efficiently prepare these states. We demonstrate this by studying preparation schemes for strongly subradiant entangled states of a chain of dipole-dipole coupled emitters. The prepared state fidelity and its entanglement depth is further improved via spatial excitation phase engineering or tailored magnetic fields.
description: 11 pages, 4 figures
Supplementary figures and table from Pervasive genotype-by-environment interactions shape the fitness effects of antibiotic resistance mutations
Creators: name: Soley, Jake K.
name: Jago, Matthew
name: Walsh, Calum J.
name: Khomarbaghi, Zahra
name: Howden, Benjamin P.
name: Lagator, Mato
Publisher: name: The Royal Society
Year: 2023
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Evolutionary Biology

description: document containing all supplementary figures and tables
How thinking about what could have been affects how we feel about what was
Creators: name: Brigard, Felipe De
name: Hanna, Eleanor
name: Jacques, Peggy L. St
name: Schacter, Daniel L.
Publisher: name: Figshare
Year: 2018
Subjects: subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases

description: Episodic counterfactual thoughts (CFT) and autobiographical memories (AM) involve the reactivation and recombination of episodic memory components into mental simulations. Upon reactivation, memories become labile and prone to modification. Thus, reactivating AM in the context of mentally generating CFT may provide an opportunity for editing processes to modify the content of the original memory. To examine this idea, this paper reports the results of two studies that investigated the effect of reactivating negative and positive AM in the context of either imagining a better (i.e. upward CFT) or a worse (i.e. downward CFT) alternative to an experienced event, as opposed to attentively retrieving the memory without mental modification (i.e. remembering) or no reactivation. Our results suggest that attentive remembering was the best strategy to both reduce the negative affect associated with negative AM, and to prevent the decay of positive affect associated with positive AM. In addition, reactivating positive, but not negative, AM with or without CFT modification reduces the perceived arousal of the original memory over time. Finally, reactivating negative AM in a downward CFT or an attentive remembering condition increases the perceived detail of the original memory over time.
A Priori Error Estimates for Some Discontinuous Galerkin Immersed Finite Element Methods
Creators: name: Lin, Tao
name: Yang, Qing
name: Zhang, Xu
Publisher: name: arXiv
Year: 2015
Subjects: subject: Numerical Analysis (math.NA)
subject: FOS: Mathematics

description: In this paper, we derive a priori error estimates for a class of interior penalty discontinuous Galerkin (DG) methods using immersed finite element (IFE) functions for a classic second-order elliptic interface problem. The error estimation shows that these methods can converge optimally in a mesh-dependent energy norm. The combination of IFEs and DG formulation in these methods allows local mesh refinement in the Cartesian mesh structure for interface problems. Numerical results are provided to demonstrate the convergence and local mesh refinement features of these DG-IFE methods.
Condensation phenomena in plasmonics
Creators: name: Martikainen, J. -P.
name: Heikkinen, M. O. J.
name: Törmä, P.
Publisher: name: arXiv
Year: 2014
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: We study arrays of plasmonic nanoparticles combined with quantum emitters, quantum plasmonic lattices, as a platform for room temperature studies of quantum many-body physics. We outline a theory to describe surface plasmon polariton distributions when they are coupled to externally pumped molecules. The possibility of tailoring the dispersion in plasmonic lattices allows realization of a variety of distributions, including the Bose-Einstein distribution as in photon condensation. We show that the presence of losses can relax some of the standard dimensionality restrictions for condensation.
description: 8 pages, 6 figures
Additional file 6: of Using in vivo oxidation status of one- and two-component redox relays to determine H2O2 levels linked to signaling and toxicity
Creators: name: Domènech, Alba
name: Ayté, José
name: Antunes, Fernando
name: Hidalgo, Elena
Publisher: name: Figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Figure S6. At non-toxic concentrations of extracellular peroxides, both systems, Pap1-Tpx1 and OxyR, behave similarly. a Growth curves of strain AD29 (WT + HA-OxyR), treated or not with 0.1 mM or 0.5 mM H2O2, were recorded for 20 h. b Cultures of strain AD29 (WT + HA-OxyR) were treated or not with the indicated concentrations of H2O2 for the times indicated, and protein extracts were obtained and processed as described in Fig. 2a, using antibodies against HA (red. HA-OxyR and ox. HA-OxyR), Tpx1 (ox. Tpx1 dimer and red. Tpx1 monomer), Pap1 (red. Pap1 and ox. Pap1), or Trx1 (red. Trx1 and ox. Trx1). c Catalase acts as a scavenger at 100 μM, but not at 50 μM H2O2. Cultures of strains AD29 (WT) and AD163 (Δctt1), carrying an integrative sty1 promoter-driven HA-oxyR gene, were treated or not with 50 or 100 μM H2O2 for the times indicated, and protein extracts were obtained and processed as described in Fig. 2a, using antibodies against Tpx1 (ox. Tpx1 dimer and red. Tpx1 monomer), sulfinylated Prx (Tpx1-SO2H), Trx1 (red. Trx1 and ox. Trx1), Pap1 (red. Pap1 and ox. Pap1), or HA (red. HA-OxyR and ox. HA-OxyR). (PDF 281 kb)
Constraining nucleon high momentum in nuclei
Creators: name: Yong, Gao-Chan
Publisher: name: arXiv
Year: 2015
Subjects: subject: Nuclear Theory (nucl-th)
subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: Recent studies at Jefferson Lab show that there are a certain proportion of nucleons in nuclei have momenta greater than the so-called nuclear Fermi momentum $p_{F}$. Based on the transport model of nucleus-nucleus collisions at intermediate energies, nucleon high momentum caused by the neutron-proton short-range correlations in nuclei is constrained by comparing with $π$ and photon experimental data and considering some uncertainties. The high momentum cutoff value $p_{max}$ $\leq$ 2$p_{F}$ is obtained.
description: 6 pages, 4 figures, to appear in PLB
A short proof of the existence of supercuspidal representations for all reductive $p$-adic groups
Creators: name: Beuzart-Plessis, Raphaël
Publisher: name: arXiv
Year: 2015
Subjects: subject: Representation Theory (math.RT)
subject: FOS: Mathematics

description: Let $G$ be a reductive $p$-adic group. We give a short proof of the fact that $G$ always admits supercuspidal complex representations. This result has already been established by A. Kret using the Deligne-Lusztig theory of representations of finite groups of Lie type. Our argument is of a different nature and is self-contained. It is based on the Harish-Chandra theory of cusp forms and it ultimately relies on the existence of elliptic maximal tori in $G$.
Additional file 4: of The association between airway eosinophilic inflammation and IL-33 in stable non-atopic COPD
Creators: name: Tworek, Damian
name: Majewski, Sebastian
name: Szewczyk, Karolina
name: Kiszałkiewicz, Justyna
name: Kurmanowska, Zofia
name: Paweł Górski
name: Brzeziańska-Lasota, Ewa
name: Kuna, Piotr
name: Antczak, Adam
Publisher: name: Figshare
Year: 2018
Subjects: subject: Medicine
subject: Immunology
subject: FOS: Clinical medicine
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy

description: Table E1. Correlations between serum and sputum IL-33 and sST2, ST2 mRNA and clinical parameters in COPD. FEV1 – forced expiratory volume in first second; FVC – forced vital capacity; CAT – COPD assessment test; 6MWT – six-minute walk test; mMRC – modified Medical Research Council dyspnea scale. (PDF 39 kb)
Stronger Error Disturbance Relations for Incompatible Quantum Measurements
Creators: name: Mukhopadhyay, Chiranjib
name: Shukla, Namrata
name: Pati, Arun Kumar
Publisher: name: arXiv
Year: 2015
Subjects: subject: Quantum Physics (quant-ph)
subject: Information Theory (cs.IT)
subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: We formulate a new error-disturbance relation, which is free from explicit dependence upon variances in observables. This error-disturbance relation shows improvement over the one provided by the Branciard inequality and the Ozawa inequality for some initial states and for particular class of joint measurements under consideration. We also prove a modified form of Ozawa's error-disturbance relation. The later relation provides a tighter bound compared to the Ozawa and the Branciard inequalities for a small number of states.
description: 5+pages, 3 figures
Robustness of visible near-infrared and mid-infrared spectroscopic models to changes in the quantity and quality of crop residues in soil
Creators: name: Greenberg, Isabel
name: Linsler, Deborah
name: Vohland, Michael
name: Ludwig, Bernard
Publisher: name: Universität Kassel
Year: 2020
Subjects: subject: 630
subject: Ernte
subject: Ernteertrag
subject: Ernterückstand
subject: Ackerboden
subject: Kohlenstoff
subject: organischer

description: Gefördert im Rahmen des Projekts DEAL
OpenAIRE Graph as an aggregator of CRIS systems
Creators: name: Czerniak, Andreas
Publisher: name: Zenodo
Year: 2022

description: OpenAIRE Research Graph as an aggregator of CRIS systems is held during the "DARIAH Bibliographical Data WG’s Open Online Workshop" with the topic: Databases and information systems for research output: digital humanities outlook on September, 30th 2022. This invited talk presents the OpenAIRE Research Graph as an aggregator of Current Research Information Systems (CRIS) in a nutshell.
Cauchy problem and exponential stability for the inhomogeneous Landau equation
Creators: name: Carrapatoso, Kleber
name: Tristani, Isabelle
name: Wu, Kung-Chien
Publisher: name: arXiv
Year: 2015
Subjects: subject: Analysis of PDEs (math.AP)
subject: FOS: Mathematics

description: This work deals with the inhomogeneous Landau equation on the torus in the cases of hard, maxwellian and moderately soft potentials. We first investigate the linearized equation and we prove exponential decay estimates for the associated semigroup. We then turn to the nonlinear equation and we use the linearized semigroup decay in order to construct solutions in a close-to-equilibrium setting. Finally, we prove a exponential stability for such a solution, with a rate as close as we want to the optimal rate given by the semigroup decay.
Solid lubrication by wet-transferred solution-processed graphene flakes: dissipation mechanisms and superlubricity in mesoscale contacts
Creators: name: Buzio, Renato
name: Gerbi, Andrea
name: Bernini, Cristina
name: Repetto, Luca
name: Silva, Andrea
name: Vanossi, Andrea
Publisher: name: arXiv
Year: 2023
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Solution-processed few-layers graphene flakes, dispensed to rotating and sliding contacts via liquid dispersions, are gaining increasing attention as friction modifiers to achieve low friction and wear at technologically-relevant interfaces. Vanishing friction states, i.e. superlubricity, have been documented for nearly-ideal nanoscale contacts lubricated by individual graphene flakes; there is however no clear understanding if superlubricity might persist for larger and morphologically-disordered contacts, as those typically obtained by graphene wet transfer from a liquid dispersion. In this study we address the friction performance of solution-processed graphene flakes by means of colloidal probe Atomic Force Microscopy. We use an additive-free aqueous dispersion to coat micrometric silica beads, which are then sled under ambient conditions against prototypical material substrates, namely graphite and the transition metal dichalcogenides (TMDs) MoS2 and WS2. High resolution microscopy proves that the random assembly of the wet-transferred flakes over the silica probes results into an inhomogeneous coating, formed by graphene patches that control contact mechanics through tens-of-nanometers tall protrusions. Atomic-scale friction force spectroscopy reveals that dissipation proceeds via stick-slip instabilities. Load-controlled transitions from dissipative stick-slip to superlubric continuous sliding may occur for the graphene-graphite homojunctions, whereas single- and multiple-slips dissipative dynamics characterizes the graphene-TMD heterojunctions. Systematic numerical simulations demonstrate that the thermally-activated single-asperity Prandtl-Tomlinson model comprehensively describes friction experiments involving different graphene-coated colloidal probes, material substrates and sliding regimes.
description: 25 pages, 6 figures
Investigation of classical radiation reaction with aligned crystals
Creators: name: Di Piazza, A.
name: Wistisen, T. N.
name: Uggerhøj, U. I.
Publisher: name: arXiv
Year: 2015
Subjects: subject: Plasma Physics (physics.plasm-ph)
subject: Accelerator Physics (physics.acc-ph)
subject: FOS: Physical sciences

description: Classical radiation reaction is the effect of the electromagnetic field emitted by an accelerated electric charge on the motion of the charge itself. The self-consistent underlying classical equation of motion including radiation-reaction effects, the Landau-Lifshitz equation, has never been tested experimentally, in spite of the first theoretical treatments of radiation reaction having been developed more than a century ago. Here we show that classical radiation reaction effects, in particular those due to the near electromagnetic field, as predicted by the Landau-Lifshitz equation, can be measured in principle using presently available facilities, in the energy emission spectrum of $30\text{-}\text{GeV}$ electrons crossing a $0.55$-$\text{mm}$ thick diamond crystal in the axial channeling regime. Our theoretical results indicate the feasibility of the suggested setup, e.g., at the CERN Secondary Beam Areas (SBA) beamlines.
description: 8 pages, 5 figures
Polarization properties of X-ray tubes used for Imaging X-ray Polarimetry Explorer calibration
Creators: name: Ratheesh, Ajay
name: Rankin, John
name: Costa, Enrico
name: Del Monte, Ettore
name: Di Marco, Alessandro
name: Fabiani, Sergio
name: La Monaca, Fabio
name: Muleri, Fabio
name: Rubini, Alda
name: Soffitta, Paolo
name: Baldini, Luca
name: Minuti, Massimo
name: Pinchera, Michele
name: Sgrò, Carmelo
Publisher: name: arXiv
Year: 2023
Subjects: subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: In this work, we measured the polarization properties of the X-rays emitted from the X-ray tubes, which were used during the calibration of the instrument onboard Imaging X-ray Polarimetry Explorer (IXPE). X-ray tubes are used as a source of unpolarized X-rays to calibrate the response of the gas pixel detectors to unpolarized radiation. However, even though the characteristic fluorescent emission lines are unpolarized, continuum bremsstrahlung emission can be polarized based on the geometry of the accelerated electrons and emitted photons. Hence, characterizing the contribution of polarized X-rays from bremsstrahlung emission is of interest, also for future measurements. We find that when accelerated electrons are parallel to the emitted photons, the bremsstrahlung emission is unpolarized, and when they are perpendicular, the polarization increases with energy, as expected from the theoretical predictions. A comparison with the theoretical predictions is also shown.
description: 30 pages, 12 Figures and 6 tables. Published in Journal of Astronomical Telescopes, Instruments, and Systems (JATIS). DOI: 10.1117/1.JATIS.9.3.038002
Additional file 1: of Clinical characteristics and surgical history of Taiwanese patients with mucopolysaccharidosis type II: data from the Hunter Outcome Survey (HOS)
Creators: name: Hsiang-Yu Lin
name: Chih-Kuang Chuang
name: Ming-Ren Chen
name: Shio Lin
name: Pao Chiu
name: Dau-Ming Niu
name: Fuu-Jen Tsai
name: Wuh-Liang Hwu
name: Yin-Hsiu Chien
name: Ju-Li Lin
name: Shuan-Pei Lin
Publisher: name: Figshare
Year: 2018
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Hematology

description: Table S1. Age at diagnosis by family history of MPS II in prospective and retrospective patients. Figure S1. Disease manifestations and signs and symptoms in prospective and retrospective patients. Figure S2. Surgical procedures in prospective and retrospective patients. Figure S3. Causes of death in prospective and retrospective patients. Figure S4. Survival in prospective and retrospective patients and according to cognitive impairment. (DOCX 292 kb)
Automated Transient Identification in the Dark Energy Survey
Creators: name: Goldstein, D. A.
name: D'Andrea, C. B.
name: Fischer, J. A.
name: Foley, R. J.
name: Gupta, R. R.
name: Kessler, R.
name: Kim, A. G.
name: Nichol, R. C.
name: Nugent, P.
name: Papadopoulos, A.
name: Sako, M.
name: Smith, M.
name: Sullivan, M.
name: Thomas, R. C.
name: Wester, W.
name: Wolf, R. C.
name: Abdalla, F. B.
name: Banerji, M.
name: Benoit-Lévy, A.
name: Bertin, E.
name: Brooks, D.
name: Rosell, A. Carnero
name: Castander, F. J.
name: da Costa, L. N.
name: Covarrubias, R.
name: DePoy, D. L.
name: Desai, S.
name: Diehl, H. T.
name: Doel, P.
name: Eifler, T. F.
name: Neto, A. Fausti
name: Finley, D. A.
name: Flaugher, B.
name: Fosalba, P.
name: Frieman, J.
name: Gerdes, D.
name: Gruen, D.
name: Gruendl, R. A.
name: James, D.
name: Kuehn, K.
name: Kuropatkin, N.
name: Lahav, O.
name: Li, T. S.
name: Maia, M. A. G.
name: Makler, M.
name: March, M.
name: Marshall, J. L.
name: Martini, P.
name: Merritt, K. W.
name: Miquel, R.
name: Nord, B.
name: Ogando, R.
name: Plazas, A. A.
name: Romer, A. K.
name: Roodman, A.
name: Sanchez, E.
name: Scarpine, V.
name: Schubnell, M.
name: Sevilla-Noarbe, I.
name: Smith, R. C.
name: Soares-Santos, M.
name: Sobreira, F.
name: Suchyta, E.
name: Swanson, M. E. C.
name: Tarle, G.
name: Thaler, J.
name: Walker, A. R.
Publisher: name: arXiv
Year: 2015
Subjects: subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Physical sciences

description: We describe an algorithm for identifying point-source transients and moving objects on reference-subtracted optical images containing artifacts of processing and instrumentation. The algorithm makes use of the supervised machine learning technique known as Random Forest. We present results from its use in the Dark Energy Survey Supernova program (DES-SN), where it was trained using a sample of 898,963 signal and background events generated by the transient detection pipeline. After reprocessing the data collected during the first DES-SN observing season (Sep. 2013 through Feb. 2014) using the algorithm, the number of transient candidates eligible for human scanning decreased by a factor of 13.4, while only 1 percent of the artificial Type Ia supernovae (SNe) injected into search images to monitor survey efficiency were lost, most of which were very faint events. Here we characterize the algorithm's performance in detail, and we discuss how it can inform pipeline design decisions for future time-domain imaging surveys, such as the Large Synoptic Survey Telescope and the Zwicky Transient Facility. An implementation of the algorithm and the training data used in this paper are available at http://portal.nersc.gov/project/dessn/autoscan.
description: 24 pages, 9 figures, 4 tables v3: added link to training data / implementation
Additional file 1: of Clinical characteristics and surgical history of Taiwanese patients with mucopolysaccharidosis type II: data from the hunter outcome survey (HOS)
Creators: name: Hsiang-Yu Lin
name: Chih-Kuang Chuang
name: Ming-Ren Chen
name: Shio Lin
name: Pao Chiu
name: Dau-Ming Niu
name: Fuu-Jen Tsai
name: Wuh-Liang Hwu
name: Yin-Hsiu Chien
name: Ju-Li Lin
name: Shuan-Pei Lin
Publisher: name: Figshare
Year: 2018
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Hematology

description: Table S1. Age at diagnosis by family history of MPS II in prospective and retrospective patients. Figure S1. Disease manifestations and signs and symptoms in prospective and retrospective patients. Figure S2. Surgical procedures in prospective and retrospective patients. Figure S3. Causes of death in prospective and retrospective patients. Figure S4. Survival in prospective and retrospective patients and according to cognitive impairment. (DOCX 292 kb)
Additional file 1: of Functions of CaPhm7 in the regulation of ion homeostasis, drug tolerance, filamentation and virulence in Candida albicans
Creators: name: Linghuo Jiang
name: Hongbo Pan
Publisher: name: Figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Pharmacology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Figure S1. Amino acid sequence comparison. Transmembrane domain (TM) regions of AtCsc1 and CaPhm7 are underlined, and TM names of AtCsc1 (blue) and CaPhm7 (red) are indicated. TMs were predicted with SMART ( http://smart.embl-heidelberg.de /). Identical amino acid residues are indicated in yellow in color, and similar amino acid residues are indicated in light blue and green. Figure S2. Disruption of CaPHM7. (A) Disruption strategy of the two alleles. PCR confirmation of genotypes of the homozygous mutant PHBCA62 with primer pairs CaPHM7-ORF-UP/DOWN (B), CaPHM7-DF/DR (C) as well as CaPHM7-DF/NAT-R (middle lane) and CaPHM7-DR/NAT-F (last lane) (D). Figure S3. TMs of AtCsc1, ScPhm7 and CaPhm7 as well as their amino acid sequence comparison. Identical amino acid residues are indicated in yellow in color, and similar amino acid residues are indicated in light blue and green. Figure S4. Growth assay. Cells were cultured in SD-URA medium at 30 °C overnight, diluted for 10 times in fresh YPD medium and grown further for indicated hours. Data were the average of three independent experiments. Growth rates of the heterozygous mutant, the homozygous mutant and the revertant were not significantly different from the wild type. Figure S5. Western blot analysis. The CAI4 control, PHBCA107 and PHBCA126 cells were grown to log-phase and collected for total protein extraction. Western blot analysis was carried out with the monoclonal anti-GFP antibody. The CaPHM7-GFP protein of 126 kDa was indicated. Figure S6. Amino acid sequence comparison. CaPhm7 shares 18% (34%) and 14% (30%) identity (similarity) with human HsAno10 and S. cerevisiae ScIst2, respectively. Identical amino acid residues are indicated in yellow in color, and similar amino acid residues are indicated in light blue and green. Table S1. Primers used in this study. (PDF 5687 kb)
Mamersella thienemanni K. Viets 1929
Creators: name: Pešić, Vladimir
name: Smit, Harry
name: Mary, Nathalie
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Trombidiformes
Anisitsiellidae
Mamersella
Mamersella thienemanni

description: Mamersella thienemanni K. Viets, 1929
(Fig. 1A–D)
Material examined. Comoros, Mayotte: River Batirini, 12°45'37,7"S, 45°06'42,0"E, 22-iv-2009, 2/0/0 (1/0/0 mounted).
Remarks. Mamersella thienemanni seems to be a very widespread and variable species (Goldschmidt 2008). The male specimens of this study agree well with the description of M. thienemanni from Madagascar (Goldschmidt 2008). Specimens in our study are notably smaller, but do not differ in proportions and general idiosoma and palp morphology (Fig. 1A–D).
Measurements: Dorsal plate L/W 492/309; ventral shield L/W 597/447; coxal field: L 369, Cx-III W 256, Cx-I mL 91, Cx-III mL 65; genital field L/W 112/81; ejaculatory complex L 128; gnathosoma vL 131; chelicera total L 222; dL/H, dL/H ratio: P-1, 22/35, 0.62; P-2, 95/55, 1.73; P-3, 45/38, 1.17; P-4, 106/29, 3.7; P-5, 23/15, 1.52; P-2/ P-4 L ratio 0.9. dL of IV-L-1–6: 112, 73, 86, 104, 125, 123.
Distribution. Indonesia, India, Madagascar. New for Comoros.
description: Published as part of Pešić, Vladimir, Smit, Harry & Mary, Nathalie, 2015, Third contribution to the knowledge of water mites from the Comoros, with the description of two new species (Acari: Hydrachnidia), pp. 445-459 in Zootaxa 3964 (4) on page 446, DOI: 10.11646/zootaxa.3964.4.4, http://zenodo.org/record/237029
title: ‘Looking both ways’: place, space, and left-wing activism in Croydon after 1956
Creators: name: Frost, Daniel
Publisher: name: University of Reading
Year: 2022

description: This thesis places the history of left-wing activism and activists within a specific suburban context. Focusing on Croydon, which predominantly elected Conservative MPs and a Conservative�controlled council until the 1990s, this study contributes to understanding left-wing politics in places where it was not necessarily electorally successful but where many activists grew up, lived, and have returned to. In the process, it explores the ways left-wing activists made sense of, and contributed to, the complex and contradictory experiences of Croydon and the suburban in a ‘suburban nation’ and ‘suburban century’. ‘Writing from within’ and drawing upon a combination of oral history interviews, archival research, and Croydon’s appearances in popular culture, this thesis adds to recent scholarship in contemporary political history and (sub)urban studies and enters conversation with the work of scholars including, but not limited to, Raymond Williams, Henri Lefebvre, and Stuart Hall. Through an innovative fourfold structure, this study presents an activist history of a place which was always in flux, internally fragmented, and understood through reference to elsewhere – whether the leafy suburbs of Surrey, ‘blitzed cities’ like Coventry, the shining skyscrapers of Manhattan, or the ageing ‘inner city’ of its Brixton neighbour. By exploring the processes of hope, frustration, and compromise through which Croydon and the suburbs were formed, this thesis argues that its late twentieth-century left-wing activists were ‘looking both ways’ between ‘town’ and ‘country’, between entering older spaces and opening new ones, and between disappointing pasts and optimistic futures – processes of suburbanisation which have rendered Croydon alternately a site of nostalgia, shame, pride, and mourning. In taking Croydon as its vantage point, it suggests an alternative perspective on the politics and culture of England in the late twentieth-century, highlighting the importance of struggles in and over, but not bounded by, space and place to contemporary left-wing activists.
The effect of scattering loss on connections between classical and quantum processes in second-order nonlinear waveguides
Creators: name: Helt, L. G.
name: Steel, M. J.
Publisher: name: arXiv
Year: 2014
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We show that a useful connection exists between spontaneous parametric downconversion (SPDC) and sum frequency generation in nonlinear optical waveguides with arbitrary scattering loss, while the same does not hold true for SPDC and difference frequency generation. This result deepens the relationship between quantum and classical second-order nonlinear optical processes in waveguides, and identifies the most accurate characterization of their quantum performance in the presence of loss based solely on classical measurements.
Reinvigorating the Mango industry in the Philippines
Creators: name: SININING, VICENTE
Publisher: name: figshare
Year: 2023
Subjects: Crop and pasture improvement (incl. selection and breeding)
Crop and pasture post harvest technologies (incl. transportation and storage)

description: The author addressed the declining mango industry in the Philippines which needs to be rehabilitated, rebuild and reinvented. The observation is true, while Philippine mango is praised in other countries, local stakeholders seemed to disregard the value of the home-grown mangoes. The author presented the challenges that farmers faced and higlighted various solutions offered by the government and stakeholders.
The electronic supplementary materials from Dim-light colour vision in the facultatively nocturnal Asian giant honeybee, Apis dorsata
Creators: name: Vijayan, Sajesh
name: Balamurali, G. S.
name: Johnson, Jewel
name: Kelber, Almut
name: Warrant, Eric J.
name: Somanathan, Hema
Publisher: name: The Royal Society
Year: 2023
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Ecology
subject: Animal Behaviour

description: sajesh_etal_2023_ESM.pdf is generated by running the markdown document in R. This document has the supplementary methods and results referred to in the main document.
Order g^2 susceptibilities in the symmetric phase of the Standard Model
Creators: name: Bodeker, D.
name: Sangel, M.
Publisher: name: arXiv
Year: 2015
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Susceptibilities of conserved charges such as baryon minus lepton number enter baryogenesis computations, since they provide the relationship between conserved charges and chemical potentials. Their next-to-leading order corrections are of order g, where g is a generic Standard Model coupling. They are due to soft Higgs boson exchange, and have been calculated recently, together with some order g^2 corrections. Here we compute the complete g^2 contributions. Close to the electroweak crossover the soft Higgs contribution is of order g^2, and is determined by the non-perturbative physics at the magnetic screening scale.
description: 18 pages, 2 figures
MPEC 2023-U40 : 2023 TX19
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2023
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469
subject: 2023 TX19

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
Proposal: Machine Vision in Everyday Life: Playful Interactions with Visual Technologies in Digital Art, Games, Narratives and Social Media
Creators: name: Rettberg, Jill Walker
Publisher: name: Zenodo
Year: 2023

description: Proposal for an ERC grant. ABSTRACT: In the last decade, machine vision has become part of the everyday life of ordinary people. Smartphones have advanced image manipulation capabilities, social media use image recognition algorithms to sort and filter visual content, and games, narratives and art increasingly represent and use machine vision techniques such as facial recognition algorithms, eye-tracking and virtual reality. The ubiquity of machine vision in ordinary peoples’ lives marks a qualitative shift where once theoretical questions are now immediately relevant to the lived experience of ordinary people. MACHINE VISION will develop a theory of how everyday machine vision affects the way ordinary people understand themselves and their world through 1) analyses of digital art, games and narratives that use machine vision as theme or interface, and 2) ethnographic studies of users of consumer-grade machine vision apps in social media and personal communication. Three main research questions address 1) new kinds of agency and subjectivity; 2) visual data as malleable; 3) values and biases. MACHINE VISION fills a research gap on the cultural, aesthetic and ethical effects of machine vision. Current research on machine vision is skewed, with extensive computer science research and rapid development and adaptation of new technologies. Cultural research primarily focuses on systemic issues (e.g. surveillance) and professional use (e.g. scientific imaging). Aesthetic theories (e.g. in cinema theory) are valuable but mostly address 20th century technologies. Analyses of current technologies are fragmented and lack a cohesive theory or model. MACHINE VISION challenges existing research and develops new empirical analyses and a cohesive theory of everyday machine vision. This project is a needed leap in visual aesthetic research. MACHINE VISION will also impact technical R&D on machine vision, enabling the design of technologies that are ethical, just and democratic.
MPEC 2023-U41 : 2023 TY19
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2023
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469
subject: 2023 TY19

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
On calculations of the twisted Alexander ideals for spatial graphs, handlebody-knots and surface-links
Creators: name: Ishii, Atsushi
name: Nikkuni, Ryo
name: Oshiro, Kanako
Publisher: name: arXiv
Year: 2015
Subjects: subject: Geometric Topology (math.GT)
subject: FOS: Mathematics
subject: 57M05, 57M15, 57Q45

description: There are many studies about twisted Alexander invariants for knots and links, but calculations of twisted Alexander invariants for spatial graphs, handlebody-knots, and surface-links have not been demonstrated well. In this paper, we give some remarks to calculate the twisted Alexander ideals for spatial graphs, handlebody-knots and surface-links, and observe their behaviors. For spatial graphs, we calculate the invariants of Suzuki's theta-curves and show that the invariants are nontrivial for Suzuki's theta-curves whose Alexander ideals are trivial. For handlebody-knots, we give a remark on abelianizations and calculate the invariant of the handlebody-knots up to six crossings. For surface-links, we correct Yoshikawa's table and calculate the invariants of the surface-links in the table.
description: 17 pages, 1 figure
An English Reading Tool as a NLP Showcase
Creators: name: Azab, Mahmoud
name: Salama, Ahmed
name: Oflazer, Kemal
name: Shima, Hideki
name: Araki, Jun
name: Mitamura, Teruko
Publisher: name: Figshare
Year: 2018
Subjects: subject: Applied Computer Science
subject: 80107 Natural Language Processing
subject: FOS: Computer and information sciences

description: We introduce -SmartReader- an English
reading tool for non-native English readers
to overcome language related hindrances
while reading a text. It makes extensive
use of widely-available NLP tools and resources.
SmartReader is a web-based application
that can be accessed from standard
browsers running on PCs or tablets.
A user can choose a text document from
the system’s library they want to read or
can upload a new document of their own
and the system will display an interactive
version of such text, that provides the
reader with an intelligent e-book functionality.
Quantum revivals of non Rabi type in Jaynes-Cummings model
Creators: name: Ozhigov, Yuri
name: Victorova, Nadejda
Publisher: name: arXiv
Year: 2015
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We studied full revivals of quantum states in the Jaynes-Cannings model. It is proved that in the case of zero detuning in subspaces generated by two adjacent pairs of energy levels, full revival of the subspace does not exist for any values of the parameters. In the case of non-zero detuning on the contrary, the set of parameters that allows full revival of such subspaces is dense as the subset of all parameters. The nature of these revivals differs from Rabi oscillations in subspaces of a single pair of energy. In more complex subspaces the presence of full revival is reduced to particular cases of 10-th Hilbert problem for rational solutions of systems of nonlinear algebraic equations, which has no algorithmic solution in general case.
description: 6 pages, Latex, 1 figure
Syntax-to-Morphology Mapping in Factored Phrase-Based Statistical Machine Translation from English to Turkish
Creators: name: Reyyan Yeniterzi
name: Oflazer, Kemal
Publisher: name: Figshare
Year: 2018
Subjects: subject: 80107 Natural Language Processing
subject: FOS: Computer and information sciences

description: We present a novel scheme to apply factored
phrase-based SMT to a language pair
with very disparate morphological structures.
Our approach relies on syntactic
analysis on the source side (English)
and then encodes a wide variety of local
and non-local syntactic structures as complex
structural tags which appear as additional
factors in the training data. On
the target side (Turkish), we only perform
morphological analysis and disambiguation
but treat the complete complex
morphological tag as a factor, instead of
separating morphemes. We incrementally
explore capturing various syntactic substructures
as complex tags on the English
side, and evaluate how our translations
improve in BLEU scores. Our maximal
set of source and target side transformations,
coupled with some additional
techniques, provide an 39% relative improvement
from a baseline 17.08 to 23.78
BLEU, all averaged over 10 training and
test sets. Now that the syntactic analysis
on the English side is available, we
also experiment with more long distance
constituent reordering to bring the English
constituent order close to Turkish, but find
that these transformations do not provide
any additional consistent tangible gains
when averaged over the 10 sets.