cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Perturbative description of nuclear double beta decay transitions
Creators: name: Bes, D. R
name: Civitarese, O.
name: Scoccola, N. N.
Publisher: name: arXiv
Year: 1998
Subjects: subject: Nuclear Theory (nucl-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: A consistent treatment of intrinsic and collective coordinates is applied to the calculation of matrix elements describing nuclear double beta decay transitions. The method, which was developed for the case of nuclear rotations, is adapted to include isospin and number of particles degrees of freedom. It is shown that the uncertainties found in most models, in dealing with these decay modes, are largely due to the mixing of physical and spurious effects in the treatment of isospin dependent interactions.
description: 4 pages, 2 figures, RevTeX
Scalable Holistic Linear Regression
Creators: name: Bertsimas, Dimitris
name: Li, Michael Lingzhi
Publisher: name: arXiv
Year: 2019
Subjects: subject: Machine Learning (stat.ML)
subject: Machine Learning (cs.LG)
subject: Optimization and Control (math.OC)
subject: FOS: Computer and information sciences
subject: FOS: Mathematics

description: We propose a new scalable algorithm for holistic linear regression building on Bertsimas & King (2016). Specifically, we develop new theory to model significance and multicollinearity as lazy constraints rather than checking the conditions iteratively. The resulting algorithm scales with the number of samples $n$ in the 10,000s, compared to the low 100s in the previous framework. Computational results on real and synthetic datasets show it greatly improves from previous algorithms in accuracy, false detection rate, computational time and scalability.
description: Accepted by Operation Research Letters
Swelling kinetics of the onion phase
Creators: name: Diamant, H.
name: Cates, M. E.
Publisher: name: arXiv
Year: 2000
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: A theory is presented for the behavior of an array of multi-lamellar vesicles (the onion phase) upon addition of solvent. A unique feature of this system is the possibility to sustain pressure gradients by tension in the lamellae. Tension enables the onions to remain stable beyond the unbinding point of a flat lamellar stack. The model accounts for various concentration profiles and interfaces developing in the onion as it swells. In particular, densely packed `onion cores' are shown to appear, as observed in experiments. The formation of interfaces and onion cores may represent an unusual example of stabilization of curved interfaces in confined geometry.
description: 13 pages, 10 PS figures, LaTeX using SVJour, submitted to Eur Phys J E
Additional file 5 of Multi-perspective comparison of the immune microenvironment of primary colorectal cancer and liver metastases
Creators: name: He, Yangsong
name: Han, Yanan
name: Fan, A-hui
name: Li, Danxiu
name: Wang, Boda
name: Ji, Kun
name: Wang, Xin
name: Zhao, Xiaodi
name: Lu, Yuanyuan
Publisher: name: figshare
Year: 2022
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 5: Table S2. Comparison of the immune markers of the TC, TF and PT regions.
Additional file 1 of Multiple-gene targeting and mismatch tolerance can confound analysis of genome-wide pooled CRISPR screens
Creators: name: Jean-Philippe Fortin
name: Jenille Tan
name: Gascoigne, Karen E.
name: Haverty, Peter M.
name: Forrest, William F.
name: Costa, Michael R.
name: Martin, Scott E.
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences

description: Table S1 Genomic alignments for MYL12A and MYL12B guides in the Avana library. Figure S1 Log-fold changes for double-target guides. Figure S2 The effect of multi-target guides in readthrough genes. Figure S3 Off-target effects for guides targeting 3 self-correlated genes. Figure S4 On-target and off-target cleavage toxicity in the GeCKOv2-Achilles and Brunello datasets. (PDF 350 kb)
A new binary decagonal Frank-Kasper quasicrystal phase
Creators: name: Roth, Johannes
name: Henley, Christopher L.
Publisher: name: arXiv
Year: 1996
Subjects: subject: Condensed Matter (cond-mat)
subject: FOS: Physical sciences

description: A structure model of atoms of two sizes, interacting with Lennard-Jones potentials and simulated by molecular dynamics, was observed to freeze into a decagonal quasicrystal dominated by Frank-Kasper coordination shells and closely related to the Henley-Elser model for icosahedral quasicrystals. Idealized structure models can be described as decorations of triangle-rectangle and rhombus tilings. Equilibrium properties of the idealized model have been determined by molecular dynamics simulations and a high stability of the model and a low jump rate of the atoms have also been observed.
description: 28 pages, LaTeX with newapa,apalike and graphicx options, 10 figures, Phil. Mag. A accepted
Fibonacci steady states in a driven integrable quantum system
Creators: name: Maity, Somnath
name: Bhattacharya, Utso
name: Dutta, Amit
name: Sen, Diptiman
Publisher: name: arXiv
Year: 2018
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We study an integrable system that is reducible to free fermions by a Jordan-Wigner transformation which is subjected to a Fibonacci driving protocol based on two non-commuting Hamiltonians. In the high frequency limit $ω\to \infty$, we show that the system reaches a non-equilibrium steady state, up to some small fluctuations which can be quantified. For each momentum $k$, the trajectory of the stroboscopically observed state lies between two concentric circles on the Bloch sphere; the circles represent the boundaries of the small fluctuations. The residual energy is found to oscillate in a quasiperiodic way between two values which correspond to the two Hamiltonians that define the Fibonacci protocol. These results can be understood in terms of an effective Hamiltonian which simulates the dynamics of the system in the high frequency limit.
description: 16 pages, 5 figures; added a discusion of the behavior of the system over very long times; this is the published version
Pair Density Wave in the Doped $t$-$J$ Model with Ring Exchange on a Triangular Lattice
Creators: name: Xu, Xiao Yan
name: Law, K. T.
name: Lee, Patrick A.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: In our previous work [arXiv:1803.00999, Phys. Rev. Lett. 121, 046401 (2018)], we found a quantum spin liquid phase with a spinon Fermi surface in the two dimensional spin-1/2 Heisenberg model with four-spin ring exchange on a triangular lattice. In this work we dope the spinon Fermi surface phase by studying the $t$-$J$ model with four-spin ring exchange. We perform density matrix renormalization group calculations on four-leg cylinders of a triangular lattice and find that the dominant pair correlation function is that of a pair density wave; i.e., it is oscillatory while decaying with distance with a power law. The doping dependence of the period is studied. This is the first example where pair density wave is the dominant pairing in a generic strongly interacting system where the pair density wave cannot be explained as a composite order and no special symmetry is required.
description: 4+2 pages, 4+4 figures
Diffractive orbits in quantum billiards
Creators: name: Pavloff, Nicolas
name: Schmit, Charles
Publisher: name: arXiv
Year: 1995
Subjects: subject: Chaotic Dynamics (nlin.CD)
subject: FOS: Physical sciences

description: We study diffractive effects in two dimensional polygonal billiards. We derive an analytical trace formula accounting for the role of non-classical diffractive orbits in the quantum spectrum. As an illustration the method is applied to a triangular billiard.
description: 7 pages, latex, 2 figures available by fax upon request.
Additional file 11 of Multiple-gene targeting and mismatch tolerance can confound analysis of genome-wide pooled CRISPR screens
Creators: name: Jean-Philippe Fortin
name: Jenille Tan
name: Gascoigne, Karen E.
name: Haverty, Peter M.
name: Forrest, William F.
name: Costa, Michael R.
name: Martin, Scott E.
Publisher: name: figshare
Year: 2019
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Computational Biology

description: Review history. (DOCX 2.8 mb)
Additional file 2 of Associations of GP practice characteristics with the rate of ambulatory care sensitive conditions in people living with dementia in England: an ecological analysis of routine data
Creators: name: Eyles, Emily
name: Redaniel, Maria Theresa
name: Purdy, Sarah
name: Tilling, Kate
name: Ben-Shlomo, Yoav
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Neuroscience
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 2 This additional file shows the intermediate models between the null and final model, untransformed
Neutrino oscillations in a model with a source and detector
Creators: name: Kiers, Ken
name: Weiss, Nathan
Publisher: name: arXiv
Year: 1997
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We study the oscillations of neutrinos in a model in which the neutrino is coupled to a localized, idealized source and detector. By varying the spatial and temporal resolution of the source and detector we are able to model the full range of source and detector types ranging from coherent to incoherent. We find that this approach is useful in understanding the interface between the Quantum Mechanical nature of neutrino oscillations on the one hand and the production and detection systems on the other hand. This method can easily be extended to study the oscillations of other particles such as the neutral K and B mesons. We find that this approach gives a reliable way to treat the various ambiguities which arise when one examines the oscillations from a wave packet point of view. We demonstrate that the conventional oscillation formula is correct in the relativistic limit and that several recent claims of an extra factor of 2 in the oscillation length are incorrect. We also demonstrate explicitly that the oscillations of neutrinos which have separated spatially may be "revived" by a long coherent measurement.
description: 30 pages, 6 figures, Latex
An Underwater Image Enhancement Benchmark Dataset and Beyond
Creators: name: Li, Chongyi
name: Guo, Chunle
name: Ren, Wenqi
name: Cong, Runmin
name: Hou, Junhui
name: Kwong, Sam
name: Tao, Dacheng
Publisher: name: arXiv
Year: 2019
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: Underwater image enhancement has been attracting much attention due to its significance in marine engineering and aquatic robotics. Numerous underwater image enhancement algorithms have been proposed in the last few years. However, these algorithms are mainly evaluated using either synthetic datasets or few selected real-world images. It is thus unclear how these algorithms would perform on images acquired in the wild and how we could gauge the progress in the field. To bridge this gap, we present the first comprehensive perceptual study and analysis of underwater image enhancement using large-scale real-world images. In this paper, we construct an Underwater Image Enhancement Benchmark (UIEB) including 950 real-world underwater images, 890 of which have the corresponding reference images. We treat the rest 60 underwater images which cannot obtain satisfactory reference images as challenging data. Using this dataset, we conduct a comprehensive study of the state-of-the-art underwater image enhancement algorithms qualitatively and quantitatively. In addition, we propose an underwater image enhancement network (called Water-Net) trained on this benchmark as a baseline, which indicates the generalization of the proposed UIEB for training Convolutional Neural Networks (CNNs). The benchmark evaluations and the proposed Water-Net demonstrate the performance and limitations of state-of-the-art algorithms, which shed light on future research in underwater image enhancement. The dataset and code are available at https://li-chongyi.github.io/proj_benchmark.html.
description: 14 pages
Additional file 1 of Associations of GP practice characteristics with the rate of ambulatory care sensitive conditions in people living with dementia in England: an ecological analysis of routine data
Creators: name: Eyles, Emily
name: Redaniel, Maria Theresa
name: Purdy, Sarah
name: Tilling, Kate
name: Ben-Shlomo, Yoav
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Neuroscience
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1 This additional file shows which conditions were considered ACSCs and which were considered non-ACSCs
Construction of Two Parametric Deformation of KdV-Hierarchy and Solution in Terms of Meromorphic Functions on the Sigma Divisor of a Hyperelliptic Curve of Genus 3
Creators: name: Ayano, Takanori
name: Buchstaber, Victor
Publisher: name: arXiv
Year: 2018
Subjects: subject: Algebraic Geometry (math.AG)
subject: Exactly Solvable and Integrable Systems (nlin.SI)
subject: FOS: Mathematics
subject: FOS: Physical sciences
subject: 14K25, 14H40, 14H42, 14H70

description: Buchstaber and Mikhailov introduced the polynomial dynamical systems in $\mathbb{C}^4$ with two polynomial integrals on the basis of commuting vector fields on the symmetric square of hyperelliptic curves. In our previous paper, we constructed the field of meromorphic functions on the sigma divisor of hyperelliptic curves of genus 3 and solutions of the systems for $g=3$ by these functions. In this paper, as an application of our previous results, we construct two parametric deformation of the KdV-hierarchy. This new system is integrated in the meromorphic functions on the sigma divisor of hyperelliptic curves of genus 3. In Section 8 of our previous paper [Funct. Anal. Appl. 51 (2017), 162-176], there are miscalculations. In appendix of this paper, we correct the errors.
Monoportula P. A. Sims & D. M. Williams, nov. gen.
Creators: name: Williams, David M.
name: Sims, Pat A.
name: Witkowski, Jakub
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Chromista
Ochrophyta
Bacillariophyceae
Cymatosirales
Rutilariaceae
Monoportula

description: Monoportula P.A.Sims & D.M.Williams nov. gen.
 Registration: http://phycobank.org/103661
 Type species:— Monoportula uralensis (Strelnikova) P.A.Sims & D.M.Williams nov. comb.
Frustules cylindrical, valve face circular, flat. Valve face bordered by expanded marginal ridge separating it from vertical mantle. Areolae poroid, on valve face arranged in interrupted radial and sub-radial rows extending from off-centre hyaline area from which a stout spine extends. Scattered spinules cover valve face disturbing areolar arrangement. Mantle areolae in vertical rows situated between hyaline marginal ridge and hyaline valve margin. Mantle areolae covered by network of anastomosing costae. Internally areolae sunk in rows between hyaline ribs, areolae becoming more numerous towards valve margin. One (1) rimoportula present, its external opening through stout tube expanded at its summit, internally as slit between raised lips.
description: Published as part of Williams, David M., Sims, Pat A. & Witkowski, Jakub, 2023, Notes on the rare Cretaceous species Syndetocystis uralensis Strelnikova leading to the description of a new monotypic genus Monoportula P. A. Sims et D. M. Williams nov. gen., pp. 219-224 in Phytotaxa 595 (2) on page 220, DOI: 10.11646/phytotaxa.595.2.8, http://zenodo.org/record/7905940
Photon- and meson-induced reactions on the nucleon
Creators: name: Feuster, T.
name: Mosel, U.
Publisher: name: arXiv
Year: 1998
Subjects: subject: Nuclear Theory (nucl-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: In an unitary effective Lagrangian model we develop a unified description of both meson scattering and photon-induced reactions on the nucleon. Adding the photon to an already existing model for meson-nucleon scattering yields both Compton and meson photoproduction amplitudes. In a simultaneous fit to all available data involving the final states $γN$, $πN$, $ππN$, $ηN$ and $K Λ$ the parameters of the nucleon resonances are extracted.
description: 57 pages, 14 figures, LaTex (uses Revtex and graphicx). Submitted to Phys. Rev. C. References updated, Fig. 14 changed
Additional file 6: of Muscle-specific regulation of right ventricular transcriptional responses to chronic hypoxia-induced hypertrophy by the muscle ring finger-1 (MuRF1) ubiquitin ligase in mice
Creators: name: Oakley, Robert
name: Campen, Matthew
name: Paffett, Michael
name: Chen, Xin
name: Wang, Zhongjing
name: Parry, Traci
name: Hillhouse, Carolyn
name: Cidlowski, John
name: Willis, Monte
Publisher: name: figshare
Year: 2018
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Cancer
subject: Computational Biology

description: Figure S4. Literature Net analysis of differentially expressed genes in right ventricles after chronic hypoxia challenge compared to normoxic controls using previously published microarray data. Analysis of the top 50 genes increased (> 4.9 fold) and top 50 genes decreased (<− 3.9 fold) listed in Additional file 4: Figure S2 using Literature Net on Duke Gather ( http://changlab.uth.tmc.edu/gather/gather.py ). Publicly available data obtained from NCBI GEO published in Drake, et al., Physiol Genomics 2013 45(12):449–61, as described in the materials and methods. (PDF 24 kb)
Additional file 3 of Autophagy activity contributes to the impairment of social recognition in Epac2−/− mice
Creators: name: Kwak, Ji-Hye
name: Lee, You-kyung
name: Jun, Mi-Hee
name: Roh, Mootaek
name: Seo, Hyunhyo
name: Lee, Juhyun
name: Lee, Kyungmin
name: Lee, Jin-A
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Science Policy
subject: Immunology
subject: FOS: Clinical medicine
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 3. Supplemnetal raw data.
MOESM5 of A fast and cost-effective microsampling protocol incorporating reduced animal usage for time-series transcriptomics in rodent malaria parasites
Creators: name: Abhinay Ramaprasad
name: Subudhi, Amit
name: Culleton, Richard
name: Arnab Pain
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 5. RNA polymerases and invasion related genes whose expression profiles are shown in Fig.Â 2b.
Statistical anisotropy in CMB spectral distortions
Creators: name: Ota, Atsuhisa
Publisher: name: arXiv
Year: 2018
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Measurements of the cosmic microwave background (CMB) spectral $y$-distortion anisotropy offer a test for the statistical isotropy of the primordial density perturbations on $0.01\lesssim k{\rm Mpc}\lesssim 1$. We compute the 1-point ensemble averages of the $y$-distortion anisotropies which vanish for the statistically isotropic perturbations. For the quadrupole statistical anisotropy, we find $4π\langle y_{2m}\rangle=-6.8A_2\times 10^{-9}Y_{2m}(\mathbf d )$ with the quadruple Legendre coefficient of the anisotropic powerspectrum $A_2$ and the $\ell=2$ spherical harmonics $Y_{2m}(\mathbf d )$ for the preferred direction $\mathbf d $. Also, we discuss the cosmic variance of the $y$-distortion anisotropy in the statistically anisotropic Universe.
description: 5 pages, 4 figures, published version
Additional file 1 of Autophagy activity contributes to the impairment of social recognition in Epac2−/− mice
Creators: name: Kwak, Ji-Hye
name: Lee, You-kyung
name: Jun, Mi-Hee
name: Roh, Mootaek
name: Seo, Hyunhyo
name: Lee, Juhyun
name: Lee, Kyungmin
name: Lee, Jin-A
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Science Policy
subject: Immunology
subject: FOS: Clinical medicine
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1. Supplemental materials and methods.
Additional file 1: of Interventions to develop collectivistic leadership in healthcare settings: a systematic review
Creators: name: Brún, Aoife De
name: O’Donovan, Roisin
name: McAuliffe, Eilish
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Biotechnology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Search engine search strings. Contains the full searches used in each search engine. (DOCX 22 kb)
Additional file 7 of Reproducing fear: the effect of birth stories on nulligravid women’s birth preferences
Creators: name: Miller, Yvette D.
name: Danoy-Monet, Marion
Publisher: name: figshare
Year: 2021
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Evolutionary Biology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 7.
Ab initio few-mode theory for quantum potential scattering problems
Creators: name: Lentrodt, Dominik
name: Evers, Jörg
Publisher: name: arXiv
Year: 2018
Subjects: subject: Quantum Physics (quant-ph)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Few-mode models have been a cornerstone of the theoretical work in quantum optics, with the famous single-mode Jaynes-Cummings model being only the most prominent example. In this work, we develop ab initio few-mode theory, a framework connecting few-mode system-bath models to ab initio theory. We first present a method to derive exact few-mode Hamiltonians for non-interacting quantum potential scattering problems and demonstrate how to rigorously reconstruct the scattering matrix from such few-mode Hamiltonians. We show that upon inclusion of a background scattering contribution, an ab initio version of the well known input-output formalism is equivalent to standard scattering theory. On the basis of these exact results for non-interacting systems, we construct an effective few-mode expansion scheme for interacting theories, which allows to extract the relevant degrees of freedom from a continuum in an open quantum system. As a whole, our results demonstrate that few-mode as well as input-output models can be extended to a general class of problems, and open up the associated toolbox to be applied to various platforms and extreme regimes. We outline differences of the ab initio results to standard model assumptions, which may lead to qualitatively different effects in certain regimes. The formalism is exemplified in various simple physical scenarios. In the process we provide proof-of-concept of the method, demonstrate important properties of the expansion scheme, and exemplify new features in extreme regimes.
description: 41 pages, 14 figures, substantially extended version now also covering interacting and nonlinear problems
Additional file 6 of Reproducing fear: the effect of birth stories on nulligravid women’s birth preferences
Creators: name: Miller, Yvette D.
name: Danoy-Monet, Marion
Publisher: name: figshare
Year: 2021
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Evolutionary Biology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 6.
Additional file 5 of Reproducing fear: the effect of birth stories on nulligravid women’s birth preferences
Creators: name: Miller, Yvette D.
name: Danoy-Monet, Marion
Publisher: name: figshare
Year: 2021
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Evolutionary Biology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 5.
MOESM4 of A fast and cost-effective microsampling protocol incorporating reduced animal usage for time-series transcriptomics in rodent malaria parasites
Creators: name: Abhinay Ramaprasad
name: Subudhi, Amit
name: Culleton, Richard
name: Arnab Pain
Publisher: name: figshare
Year: 2019
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 4. P. vinckei genes ordered according to the gene expression of their orthologs in P. falciparum.
Phases of the two-band model of spinless fermions in one dimension
Creators: name: Ledermann, Urs
name: Hur, Karyn Le
Publisher: name: arXiv
Year: 1999
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: We study the two-band model of spinless fermions in one dimension for weak repulsive interactions. In this case, the model is equivalent to the weakly interacting spinless two-leg ladder. We obtain analytic expressions for the superconducting pairing correlation function and the charge density correlation function, which show, that a finite interchain hopping t_p results in dominant superconductivity for repulsive interactions (for vanishing t_p, we recover previous results). We furthermore find that the transition from the superconducting phase to the usual one-dimensional (Luttinger) metal at large doping occurs via a mixed phase, where superconducting pairs are formed in the bonding band only. We give the phase diagram as a function of temperature and doping.
description: 10 pages, 2 figures
Additional file 4 of Reproducing fear: the effect of birth stories on nulligravid women’s birth preferences
Creators: name: Miller, Yvette D.
name: Danoy-Monet, Marion
Publisher: name: figshare
Year: 2021
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Evolutionary Biology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 4.
Additional file 2: of Epidemiology of non-steroidal anti-inflammatory drugs consumption in Spain. The MCC-Spain study
Creators: name: Gómez-Acebo, Inés
name: Dierssen-Sotos, Trinidad
name: de Pedro, María
name: Pérez-Gómez, Beatriz
name: Castaño-Vinyals, Gemma
name: Fernández-Villa, Tania
name: Palazuelos-Calderón, Camilo
name: Amiano, Pilar
name: Etxeberria, Jaione
name: Benavente, Yolanda
name: Fernández-Tardón, Guillermo
name: Salcedo-Bellido, Inmaculada
name: Capelo, Rocío
name: Peiró, Rosana
name: Marcos-Gragera, Rafael
name: Huerta, José
name: Tardón, Adonina
name: Barricarte, Aurelio
name: Altzibar, Jone-Miren
name: Alonso-Molero, Jessica
name: Dávila-Batista, Verónica
name: Aragonés, Nuria
name: Pollán, Marina
name: Kogevinas, Manolis
name: Llorca, Javier
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Environmental Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy

description: NSAID-group current use by age and sex [%, (95% CI)]. (PDF 43 kb)
Affine quantisation of the Brans-Dicke theory: Smooth bouncing and the equivalence between the Einstein and Jordan frames
Creators: name: Frion, E.
name: Almeida, C. R.
Publisher: name: arXiv
Year: 2018
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: In this work, we present a complete analysis of the quantisation of the classical Brans-Dicke Theory using the method of affine quantisation in the Hamiltonian description of the theory. The affine quantisation method is based on the symmetry of the phase-space of the system, in this case the (positive) half-plane, that is identified with the affine group. We consider a FLRW-type spacetime, and since the scale factor is always positive, the affine method seems to be more suited than the canonincal quantisation for our Quantum Cosmology. We find the wave function of the Brans-Dicke universe, and its energy spectrum. A smooth bounce is expected at the semi-classical level in the quantum phase-space portrait. We also adress the problem of equivalence between the Jordan and Einstein frames.
description: 28 pages, 8 figures
Additional file 3 of Reproducing fear: the effect of birth stories on nulligravid women’s birth preferences
Creators: name: Miller, Yvette D.
name: Danoy-Monet, Marion
Publisher: name: figshare
Year: 2021
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Evolutionary Biology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 3.
MOESM3 of A fast and cost-effective microsampling protocol incorporating reduced animal usage for time-series transcriptomics in rodent malaria parasites
Creators: name: Abhinay Ramaprasad
name: Subudhi, Amit
name: Culleton, Richard
name: Arnab Pain
Publisher: name: figshare
Year: 2019
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 3. Gene expression data of P. vinckei. FPKM values of P. vinckei genes ordered according to their phase of expression.
Additional file 2 of Reproducing fear: the effect of birth stories on nulligravid women’s birth preferences
Creators: name: Miller, Yvette D.
name: Danoy-Monet, Marion
Publisher: name: figshare
Year: 2021
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Evolutionary Biology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 2.
Thermodynamic Description of the Relaxation of Two-Dimensional Euler Turbulence Using Tsallis Statistics
Creators: name: Boghosian, Bruce M.
Publisher: name: arXiv
Year: 1995
Subjects: subject: Chaotic Dynamics (nlin.CD)
subject: Adaptation and Self-Organizing Systems (nlin.AO)
subject: Astrophysics (astro-ph)
subject: Condensed Matter (cond-mat)
subject: Pattern Formation and Solitons (nlin.PS)
subject: FOS: Physical sciences

description: Euler turbulence has been experimentally observed to relax to a metaequilibrium state that does not maximize the Boltzmann entropy, but rather seems to minimize enstrophy. We show that a recent generalization of thermodynamics and statistics due to Tsallis is capable of explaining this phenomenon in a natural way. The maximization of the generalized entropy $S_{1/2}$ for this system leads to precisely the same profiles predicted by the Restricted Minimum Enstrophy theory of Huang and Driscoll. This makes possible the construction of a comprehensive thermodynamic description of Euler turbulence.
description: 15 pages, RevTeX
Symmetry-protected nodal phases in non-Hermitian systems
Creators: name: Budich, Jan Carl
name: Carlström, Johan
name: Kunst, Flore K.
name: Bergholtz, Emil J.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Optics (physics.optics)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Non-Hermitian (NH) Hamiltonians have become an important asset for the effective description of various physical systems that are subject to dissipation. Motivated by recent experimental progress on realizing the NH counterparts of gapless phases such as Weyl semimetals, here we investigate how NH symmetries affect the occurrence of exceptional points (EPs), that generalize the notion of nodal points in the spectrum beyond the Hermitian realm. Remarkably, we find that the dimension of the manifold of EPs is generically increased by one as compared to the case without symmetry. This leads to nodal surfaces formed by EPs that are stable as long as a protecting symmetry is preserved, and that are connected by open Fermi volumes. We illustrate our findings with analytically solvable two-band lattice models in one and two spatial dimensions, and show how they are readily generalized to generic NH crystalline systems.
description: Editors' Suggestion
Additional file 1 of Reproducing fear: the effect of birth stories on nulligravid women’s birth preferences
Creators: name: Miller, Yvette D.
name: Danoy-Monet, Marion
Publisher: name: figshare
Year: 2021
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Evolutionary Biology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1.
Lorentz Symmetry and the Internal Structure of the Nucleon
Creators: name: Ji, Xiangdong
Publisher: name: arXiv
Year: 1997
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: To investigate the internal structure of the nucleon, it is useful to introduce quantities that do not transform properly under Lorentz symmetry, such as the four-momentum of the quarks in the nucleon, the amount of the nucleon spin contributed by quark spin, etc. In this paper, we discuss to what extent these quantities do provide Lorentz-invariant descriptions of the nucleon structure.
description: 6 pages, no figure
Additional file 1 of Acupressure therapy and Liu Zi Jue Qigong for pulmonary function and quality of life in patients with severe novel coronavirus pneumonia (COVID-19): a study protocol for a randomized controlled trial
Creators: name: Zhang, Shuaipan
name: Zhu, Qingguang
name: Zhan, Chao
name: Cheng, Wei
name: Mingfang, Xiao
name: Fang, Min
name: Fang, Lei
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Pharmacology
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Additional file 1. SPIRIT 2013 Checklist: Recommended items to address in a clinical trial protocol and related documents.
A Simple Model for the DNA Denaturation Transition
Creators: name: Causo, Maria Serena
name: Coluzzi, Barbara
name: Grassberger, Peter
Publisher: name: arXiv
Year: 1999
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Quantitative Biology (q-bio)
subject: FOS: Physical sciences
subject: FOS: Biological sciences

description: We study pairs of interacting self-avoiding walks on the 3d simple cubic lattice. They have a common origin and are allowed to overlap only at the same monomer position along the chain. The latter overlaps are indeed favored by an energetic gain. This is inspired by a model introduced long ago by Poland and Sheraga [J. Chem. Phys. {\bf 45}, 1464 (1966)] for the denaturation transition in DNA where, however, self avoidance was not fully taken into account. For both models, there exists a temperature T_m above which the entropic advantage to open up overcomes the energy gained by forming tightly bound two-stranded structures. Numerical simulations of our model indicate that the transition is of first order (the energy density is discontinuous), but the analog of the surface tension vanishes and the scaling laws near the transition point are exactly those of a second order transition with crossover exponent ϕ=1. Numerical and exact analytic results show that the transition is second order in modified models where the self-avoidance is partially or completely neglected.
description: 29 pages, LaTeX, 20 postscript figures
Additional file 1 of AutoFlow® versus volume-controlled ventilation for laparoscopic gynecological surgery using LMA® ProSeal™: a randomized controlled trial
Creators: name: Nakanishi, Toshiyuki
name: Sakamoto, Seishi
name: Yoshimura, Manabu
name: Toriumi, Takashi
Publisher: name: figshare
Year: 2021
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: Additional file 1.
Simple Mechanism of Softening Structure Functions at Low Transverse Momentum Region
Creators: name: Molodtsov, S. V.
name: Snigirev, A. M.
name: Zinovjev, G. M.
Publisher: name: arXiv
Year: 1998
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The relevance of the dipole configurations of quarks in forming nucleus structure functions is discussed. It is shown that a radiation generated by dipole configurations while moving relativistically along their axises is described by distributions which are finite and infrared stable in low transverse momentum region. It is argued that there is an exponential transition to the perturbative regime of large transverse momenta and its power is defined by the distance between the dipole charges in its rest frame $m^{-1}_π$.
description: 8 pages
No End of Tricks: Electrons in the Fractional Quantum Hall Regime
Creators: name: MacDonald, A. H.
Publisher: name: arXiv
Year: 1996
Subjects: subject: Condensed Matter (cond-mat)
subject: FOS: Physical sciences

description: In the strong magnetic field fractional quantum Hall regime, electrons in a two-dimensional electron system are confined to their lowest Landau level. Because of the macroscopic Landau level degeneracy nearly all physical properties at low energies and temperatures are then entirely determined by electron-electron interactions. The properties of these non-Fermi-liquid electronic systems continue to surprise. In this article we briefly survey some recent advances in the physics of the fractional Hall regime.
description: 22 pages including 4 figures, submitted to Solid State Communications
Microwave preparation of two-dimensional fermionic spin mixtures
Creators: name: Peaudecerf, B.
name: Andia, M.
name: Brown, M.
name: Haller, E.
name: Kuhr, S.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We present a method for preparing a single two-dimensional sample of a two-spin mixture of fermionic potassium in a single antinode of an optical lattice, in a quantum-gas microscope apparatus. Our technique relies on spatially-selective microwave transitions in a magnetic field gradient. Adiabatic transfer pulses were optimized for high efficiency and minimal atom loss and heating due to spin-changing collisions. We have measured the dynamics of those loss processes, which are more pronounced in the presence of a spin mixture. As the efficient preparation of atoms in a single antinode requires a homogeneous transverse magnetic field, we developed a method to image and minimize the magnetic field gradients in the focal plane of the microscope.
description: 8 pages, 5 figures
Additional file 1 of State variation in effects of state social distancing policies on COVID-19 cases
Creators: name: Kaufman, Brystana G.
name: Whitaker, Rebecca
name: Mahendraratnam, Nirosha
name: Hurewitz, Sophie
name: Yi, Jeremy
name: Smith, Valerie A.
name: McClellan, Mark
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Figure S1. Comparing Predicted and Observed COVID-19 Cases (lagged 5 days) for Models A-F. Table S1. State-specific estimates of COVID-19 cases averted with social distancing policies compared to projected cases without social distancing (3 weeks after school closure).
MOESM2 of A fast and cost-effective microsampling protocol incorporating reduced animal usage for time-series transcriptomics in rodent malaria parasites
Creators: name: Abhinay Ramaprasad
name: Subudhi, Amit
name: Culleton, Richard
name: Arnab Pain
Publisher: name: figshare
Year: 2019
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 2. Subsampling and cost estimation for microsampling protocol.
Scattering of Spinning Black Holes from Exponentiated Soft Factors
Creators: name: Guevara, Alfredo
name: Ochirov, Alexander
name: Vines, Justin
Publisher: name: arXiv
Year: 2018
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We provide evidence that the classical scattering of two spinning black holes is controlled by the soft expansion of exchanged gravitons. We show how an exponentiation of Cachazo-Strominger soft factors, acting on massive higher-spin amplitudes, can be used to find spin contributions to the aligned-spin scattering angle, conjecturally extending previously known results to higher orders in spin at one-loop order. The extraction of the classical limit is accomplished via the on-shell leading-singularity method and using massive spinor-helicity variables. The three-point amplitude for arbitrary-spin massive particles minimally coupled to gravity is expressed in an exponential form, and in the infinite-spin limit it matches the effective stress-energy tensor of the linearized Kerr solution. A four-point gravitational Compton amplitude is obtained from an extrapolated soft theorem, equivalent to gluing two exponential three-point amplitudes, and becomes itself an exponential operator. The construction uses these amplitudes to: 1) recover the known tree-level scattering angle at all orders in spin, 2) recover the known one-loop linear-in-spin interaction, 3) match a previous conjectural expression for the one-loop scattering angle at quadratic order in spin, 4) propose new one-loop results through quartic order in spin. These connections link the computation of higher-multipole interactions to the study of deeper orders in the soft expansion.
description: 29 pages + appendices + refs, 3 figures; v3 minor corrections, journal version
Chaotic principle: some applications to developed turbulence
Creators: name: Gallavotti, Giovanni
Publisher: name: arXiv
Year: 1995
Subjects: subject: Chaotic Dynamics (nlin.CD)
subject: FOS: Physical sciences

description: Some models for developed turbulence are considered; they are shown to obey a large fluctuations theorem, and one among them also obeys a response reciprocity relation of Onsager's type. This illustrates and extends ideas and techniques developed in earlier works mainly for non equilibrium problems in statistical mechanics.
description: 17 pages, Postscript (uncompressed, not encoded)
Additional file 1 of Conducting a psychosocial and lifestyle assessment as part of an integrated care approach for childhood obesity: experiences, needs and wishes of Dutch healthcare professionals
Creators: name: Koetsier, L. W.
name: van Mil, M. M. A.
name: Eilander, M. M. A.
name: van den Eynde, E.
name: Baan, C. A.
name: Seidell, J. C.
name: Halberstadt, J.
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1.
Breakdown of Luttinger liquid state in one-dimensional frustrated spinless fermion model
Creators: name: Zhuravlev, A. K.
name: Katsnelson, M. I.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: Haldane hypothesis about the universality of Luttinger liquid (LL) behavior in conducting one-dimensional (1D) fermion systems is checked numerically for spinless fermion model with next-nearest-neighbor interactions. It is shown that for large enough interactions the ground state can be gapless (metallic) due to frustrations but not be LL. The exponents of correlation functions for this unusual conducting state are found numerically by finite-size method.
description: 3 pages, 4 figures, RevTex