cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
An Edge-based Interface Tracking (EBIT) Method for Multiphase Flows with Phase Change
Creators: name: Long, Tian
name: Pan, Jieyun
name: Zaleski, Stéphane
Publisher: name: arXiv
Year: 2024
Subjects: subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences

description: We present a novel Front-Tracking method, the Edge-Based Interface Tracking (EBIT) method for multiphase flow simulations. In the EBIT method, the markers are located on the grid edges and the interface can be reconstructed without storing the connectivity of the markers. This feature makes the process of marker addition or removal easier than in the traditional Front-Tracking method. The EBIT method also allows almost automatic parallelization due to the lack of explicit connectivity.
 In a previous journal article we have presented the kinematic part of the EBIT method, that includes the algorithms for piecewise linear reconstruction and advection of the interface. Here, we complete the presentation of the EBIT method and combine the kinematic algorithm with a Navier--Stokes solver. A circle fit is now implemented to improve the accuracy of mass conservation in the reconstruction phase. Furthermore, to identify the reference phase and to distinguish ambiguous topological configurations, we introduce a new feature: the Color Vertex. For the coupling with the Navier--Stokes equations, we first calculate volume fractions from the position of the markers and the Color Vertex, then viscosity and density fields from the computed volume fractions and finally surface tension stresses with the Height-Function method. In addition, an automatic topology change algorithm is implemented into the EBIT method, making it possible the simulation of more complex flows. The two-dimensional version of the EBIT method has been implemented in the free Basilisk platform, and validated with seven standard test cases: stagnation flow, translation with uniform velocity, single vortex, Zalesak's disk, capillary wave, Rayleigh-Taylor instability and rising bubble. The results are compared with those obtained with the Volume-of-Fluid (VOF) method already implemented in Basilisk.
Possible origins of anomalous H$\,$I gas around MHONGOOSE galaxy, NGC 5068
Creators: name: Healy, J.
name: de Blok, W. J. G.
name: Maccagni, F. M.
name: Amram, P.
name: Chemin, L.
name: Combes, F.
name: Holwerda, B. W.
name: Kamphuis, P.
name: Pisano, D. J.
name: Schinnerer, E.
name: Spekkens, K.
name: Verdes-Montenegro, L.
name: Walter, F.
name: Adams, E. A. K.
name: Gibson, B. K.
name: Kleiner, D.
name: Veronese, S.
name: Zabel, N.
name: English, J.
name: Carignan, C.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: The existing reservoirs of neutral atomic hydrogen gas (H$\,$I) in galaxies are insufficient to have maintained the observed levels of star formation without some kind of replenishment. {This refuelling of the H$\,$I reservoirs} is likely to occur at column densities an order of magnitude lower than previous observational limits (N$_{\rm{H\,I}\, limit} \sim 10^{19}\,$cm$^{-2}$ at 30$''$ resolution over a linewidth of $20\,$km/s). In this paper, we present recent deep H$\,$I observations of NGC 5068, a nearby isolated star-forming galaxy observed by MeerKAT as part of the MHONGOOSE survey. With these new data, we are able to detect low column density H$\,$I around NGC 5068 with a $3σ$ detection limit of N$_{\rm{H\,I}} = 6.4 \times 10^{17}\,$cm$^{-2}$ at 90$''$ resolution over a $20\,$km/s linewidth. The high sensitivity and resolution of the MeerKAT data reveal a complex morphology of the H$\,$I in this galaxy -- a regularly rotating inner disk coincident with the main star-forming disk of the galaxy, a warped outer disk of low column density gas (N$_{\rm{H\,I}} < 9 \times 10^{19}\,$cm$^{-2}$), in addition to clumps of gas on the north west side of the galaxy. We employ a simple two disk model that describe the inner and outer disks, and are able to identify anomalous gas that deviates from the rotation of the main galaxy. The morphology and the kinematics of the anomalous gas suggest a possible extra-galactic origin. We explore a number of possible origin scenarios that may explain the anomalous gas, and conclude that fresh accretion is the most likely scenario.
description: 17 pages, 13 figures, 5 tables. Accepted for publication in A&A
Additional file 1 of Correcting gradient-based interpretations of deep neural networks for genomics
Creators: name: Majdandzic, Antonio
name: Rajesh, Chandana
name: Koo, Peter K.
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Statistics
subject: FOS: Mathematics

description: Additional file 1. Supplementary Tables S1, Figures S1-S13, and Notes S1 and S2.
Leaving No Matter Unturned -- Analysing existing LHC measurements and events with jets and missing transverse energy measured by the ATLAS Experiment insearch of Dark Matter
Creators: name: Habedank, Martin
Publisher: name: arXiv
Year: 2024
Subjects: subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: Various astrophysical observations point towards an as-of-yet unexplained, mainly gravitationally interacting type of matter. If this matter, called Dark Matter, is an elementary particle, it could be produced in particle collisions at the Large Hadron Collider. Given its weak interaction with ordinary matter, however, it would not be directly observable with the general-purpose detectors at the Large Hadron Collider. Its production would therefore manifest as events in which detector-visible objects recoil against the detector-invisible Dark Matter, giving rise to missing transverse energy. This thesis focuses on final states in which these visible objects are jets.
 A measurement of the final state of large missing transverse energy and at least one jet in 139 fb$^{-1}$ of proton-proton collisions at 13 TeV recorded with the ATLAS detector at the Large Hadron Collider is performed in this thesis. Good agreement between measured data and Standard-Model prediction is found in a statistical fit, corresponding to a reduced chi-square of 1.37. The measurement is corrected for detector effects to facilitate later reinterpretation. Measurements prepared in such a way can, for example, be exploited by the CONTUR toolkit to set constraints on new theories. Both, the results of the measurement and the CONTUR toolkit making use of existing measurements at the Large Hadron Collider, are employed to set exclusion limits on a model able to explain Dark Matter, the two-Higgs-doublet model with a pseudoscalar mediator to Dark Matter. At $\tanβ=1$, masses of the pseudoscalar $A$ up to 425 GeV and larger than 1600 GeV are excluded at 95 % confidence level. At $m_H\equiv m_A\equiv m_{H^\pm}=$ 600 GeV, masses of the pseudoscalar $a$ up to 550 GeV and values of $\tanβ$ up to 1.5 as well as larger than 20 are excluded at 95 % confidence level.
description: 313 pages
Additional file 1 of Quality of obstetric and newborn care in health centers of Addis Ababa City: using the WHO quality framework
Creators: name: Abebe, Amaha Haile
name: Mmusi-Phetoe, Rose
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy

description: Additional file 1: S table 1. Percentage distribution of women in the postpartum period by sociodemographic characterstics (N=500)9. S table 2. Midwives sociodemograpich characterstics (N=338).
Additional file 1 of Parametric and non-parametric Poisson regression for modelling of the arterial input function in positron emission tomography
Creators: name: Matheson, Granville J.
name: Ge, Liner
name: Zhang, Mengyu
name: Sun, Bingyu
name: Tu, Yuqi
name: Zanderigo, Francesca
name: Forsberg Morèn, Anton
name: Ogden, R. Todd
Publisher: name: figshare
Year: 2024
Subjects: subject: Cell Biology
subject: Biotechnology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Plant Biology
subject: FOS: Biological sciences

description: Additional file 1. Supplementary Materials.
PRK1900773_ESI_word97 – Supplemental material for Atmospheric reactions of glyoxal with NO2 and NH2 radicals: Hydrogen abstraction mechanism and natural bond orbital analysis
Creators: name: Saghafi, Homeira
name: Vahedpour, Morteza
Publisher: name: Figshare
Year: 2019
Subjects: subject: 91299 Materials Engineering not elsewhere classified
subject: FOS: Materials engineering

description: Supplemental material, PRK1900773_ESI_word97 for Atmospheric reactions of glyoxal with NO2 and NH2 radicals: Hydrogen abstraction mechanism and natural bond orbital analysis by Homeira Saghafi and Morteza Vahedpour in Progress in Reaction Kinetics and Mechanism
Quantum state preparation of topological chiral spin liquids via Floquet engineering
Creators: name: Mambrini, Matthieu
name: Poilblanc, Didier
Publisher: name: arXiv
Year: 2024
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: In condensed matter, Chiral Spin Liquids (CSL) are quantum spin analogs of electronic Fractional Quantum Hall states (in the continuum) or Fractional Chern Insulators (on the lattice). As the latter, CSL are remarquable states of matter, exhibiting topological order and chiral edge modes. Preparing CSL on quantum simulators like cold atom platforms is still an open challenge. Here we propose a simple setup on a finite cluster of spin-1/2 located at the sites of a square lattice. Using a Resonating Valence Bond (RVB) non-chiral spin liquid as initial state on which fast time-modulations of strong nearest-neighbor Heisenberg couplings are applied, following different protocols (out-of-equilibrium quench or semi-adiabatic ramping of the drive), we show the slow emergence of such a CSL phase. An effective Floquet dynamics, obtained from a high-frequency Magnus expansion of the drive Hamiltonian, provides a very accurate and simple framework fully capturing the out-of-equilibrium dynamics. An analysis of the resulting prepared states in term of Projected Entangled Pair states gives further insights on the topological nature of the chiral phase. Finally, we discuss possible applications to quantum computing.
description: 28 pages, 7 figures, 1 table
Additional file 1 of Correlation between the triglyceride-glucose index and the onset of atrial fibrillation in patients with non-alcoholic fatty liver disease
Creators: name: Zhang, Yao
name: Wang, Leigang
name: Qi, Jiaxin
name: Yu, Bing
name: Zhao, Jianqi
name: Pang, Lin
name: Zhang, Wenjing
name: Bin, Liang
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified

description: Additional file 1. Additional tables.
Rich Metadata From The Start
Creators: name: Hopt, Oliver
name: Klas, Claus-Peter
name: Mühlbauer, Alexander
name: Zenk-Möltgen, Wolfgang
Publisher: name: Zenodo
Year: 2016
Subjects: EDDI16
DDI

description: In the GLES project, GESIS will prepare and run several surveys on the German national election in 2017. In EDDI2015 we provided an overview of the workflow necessary. The mostly manual process of creating questionnaires to running the study and documenting it for research and evaluation will be supported by several web-based tools. One major tool developed within the project is the questionnaire editor. On the frontend it is a collaborative editor to create, edit and structure questionnaires. It enables to create questions, question grids and logical blocks as main components.

Answer domains, interviewer instructions and filter statements are managed separately for reuse.

On the backend side it is fully DDI-L enabled based on the DDI-FlatDB architecture with full history on revisions and versions.

To support the creation process a question database will be developed to find questions from other studies or older waves. The information that the questions are re-used will be stored in the new questionnaire for methodological research. At any time, the questionnaire can be exported to DDI, PDF or office formats. In addition, statistical file prototypes can be created for handover to the survey institutions to predefine the structure and naming conventions of the later dataset.
Additional file 3 of β-actin mediated H3K27ac changes demonstrate the link between compartment switching and enhancer-dependent transcriptional regulation
Creators: name: Mahmood, Syed Raza
name: Said, Nadine Hosny El
name: Gunsalus, Kristin C.
name: Percipalle, Piergiorgio
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 3.
ALMA-IMF XI: The sample of hot core candidates A rich population of young high-mass proto-stars unveiled by the emission of methyl formate
Creators: name: Bonfand, M.
name: Csengeri, T.
name: Bontemps, S.
name: Brouillet, N.
name: Motte, F.
name: Louvet, F.
name: Ginsburg, A.
name: Cunningham, N.
name: Galván-Madrid, R.
name: Herpin, F.
name: Wyrowski, F.
name: Valeille-Manet, M.
name: Stutz, A. M.
name: Di Francesco, J.
name: Gusdorf, A.
name: Fernández-López, M.
name: Lefloch, B.
name: Liu, H-L.
name: Sanhueza, P.
name: Álvarez-Gutiérrez, R. H.
name: Olguin, F.
name: Nony, T.
name: Lopez-Sepulcre, A.
name: Dell'Ova, P.
name: Pouteau, Y.
name: Jeff, D.
name: Chen, H. -R. V.
name: Armante, M.
name: Towner, A.
name: Bronfman, L.
name: Kessler, N.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: Sites associated with high-mass star and cluster formation exhibit a so-called hot core phase, characterized by high temperatures and column densities of complex organic molecules. We built a comprehensive census of hot core candidates towards the ALMA-IMF protoclusters based on the detection of two CH3OCHO emission lines at 216.1 GHz. We used the source extraction algorithm GExt2D to identify peaks of methyl formate (CH3OCHO) emission that is a complex species commonly observed towards sites of star formation. We built up a catalog of 76 hot core candidates with masses ranging from about 0.2 to 80 Msun , of which 56 are new detections. A large majority of these objects are compact, rather circular, with deconvolved FWHM sizes of about 2300 au on average. About 30% of our sample of methyl formate sources have core masses above 8 Msun within sizes ranging from about 1000 au to 13400 au, which well correspond to archetypical hot cores. The origin of the CH3OCHO emission toward the lower-mass cores can be explained by a mixture of contribution from shocks, or may correspond to objects in a more evolved state, i.e. beyond the hot core stage. We find that the fraction of hot core candidates increases with the core mass. The large fraction of hot core candidates towards the most massive cores suggests that they rapidly enter the hot core phase and feedback effects from the forming protostar(s) impact their environment on short time-scales.
Additional file 10 of Low expression of the dynamic network markers FOS/JUN in pre-deteriorated epithelial cells is associated with the progression of colorectal adenoma to carcinoma
Creators: name: Huang, Xiaoqi
name: Han, Chongyin
name: Zhong, Jiayuan
name: Hu, Jiaqi
name: Jin, Yabin
name: Zhang, Qinqin
name: Luo, Wei
name: Liu, Rui
name: Ling, Fei
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 10: Table S3. Signature genes for 6 clusters of cells on pseudotime trajectory.
Molecular gas scaling relations for local star-forming galaxies in the low-$M_*$ regime
Creators: name: Hagedorn, B.
name: Cicone, C.
name: Sarzi, M.
name: Saintonge, A.
name: Severgnini, P.
name: Vignali, C.
name: Shen, S.
name: Rubinur, K.
name: Schimek, A.
name: Lasrado, A.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We derived molecular gas fractions ($f_\mathrm{mol}=M_\mathrm{mol}/M_*$) and depletion times ($τ_\mathrm{mol}= M_\mathrm{mol}/\mathrm{SFR} $) for 353 galaxies representative of the local star-forming population with $10^{8.5}\,M_\odot < M_* < 10^{10.5}\,M_\odot$ drawn from the ALLSMOG and xCOLDGASS surveys of CO(2-1) and CO(1-0) line emission. By adding constraints from low-mass galaxies and upper limits for CO non-detections, we find the median molecular gas fraction of the local star-forming population to be constant at $\log f_\mathrm{mol}=-0.99^{+0.22}_{-0.19}$, challenging previous reports of increased molecular gas fractions in low-mass galaxies. Above $M_*\sim 10^{10.5}\,M_\odot$, we find the $f_\mathrm{mol}$ vs. $M_*$ relation to be sensitive to the selection criteria for star-forming galaxies. We tested the robustness of our results against different prescriptions for the CO-to-H$_2$ conversion factor and different selection criteria for star-forming galaxies. The depletion timescale $τ_\mathrm{mol}$ weakly depends on $M_*$, following a power law with a best-fit slope of $0.16\pm 0.03$. This suggests that small variations in specific SFR ($ \mathrm{sSFR=SFR}/M_*$) across the local main sequence of star-forming galaxies with $M_* < 10^{10.5}\,M_\odot$ are mainly driven by differences in the efficiency of converting the available molecular gas into stars. We tested these results against a possible dependence of $f_\mathrm{mol}$ and $τ_\mathrm{mol}$ on the surrounding (group) environment of the targets by splitting them into centrals, satellites, and isolated galaxies, and find no significant variation between these populations. We conclude that the group environment is unlikely to have a large systematic effect on the molecular gas content of star-forming galaxies in the local Universe.
description: Accepted for publication in A&A. 16 pages, 15 figures
Supplemental Material5 - Supplemental material for Distinct serum and cerebrospinal fluid cytokine and chemokine profiles in autoantibody-associated demyelinating diseases
Creators: name: Hofer, Livia S
name: Mariotto, Sara
name: Wurth, Sebastian
name: Ferrari, Sergio
name: Mancinelli, Chiara R
name: Delogu, Rachele
name: Monaco, Salvatore
name: Gajofatto, Alberto
name: Schwaiger, Carmen
name: Rostasy, Kevin
name: Deisenhammer, Florian
name: Höftberger, Romana
name: Berger, Thomas
name: Reindl, Markus
Publisher: name: Figshare
Year: 2019
Subjects: subject: 110904 Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: Neuroscience

description: Supplemental material, Supplemental Material5 for Distinct serum and cerebrospinal fluid cytokine and chemokine profiles in autoantibody-associated demyelinating diseases by Livia S Hofer Clinical Department of Neurology, Medical University of Innsbruck, Austria Sara Mariotto Department of Neuroscience, Biomedicine and Movement Sciences, University of Verona, Italy Sebastian Wurth Clinical Department of Neurology, Medical University of Innsbruck, Austria Sergio Ferrari Department of Neuroscience, Biomedicine and Movement Sciences, University of Verona, Italy Chiara R Mancinelli Multiple Sclerosis Centre, Spedali Civili di Brescia, Italy RacheleDelogu Department of Clinical and Experimental Medicine, University of Sassari, Italy Monaco Salvatore Department of Neuroscience, Biomedicine and Movement Sciences, University of Verona, Italy Alberto Gajofatto Department of Neuroscience, Biomedicine and Movement Sciences, University of Verona, Italy Carmen Schwaiger Institute of Neurology, Medical University of Vienna, Austria Kevin Rostasy Paediatric Neurology, Witten/Herdecke University, Germany Florian Deisenhammer Clinical Department of Neurology, Medical University of Innsbruck, Austria Romana Höftberger Institute of Neurology, Medical University of Vienna, Austria Thomas Berger Department of Neurology, Medical University of Vienna, Austria Markus Reindl Clinical Department of Neurology, Medical University of Innsbruck, Austria in Multiple Sclerosis Journal—Experimental, Translational and Clinical
Galaxies with grains: unraveling dust evolution and extinction curves with hydrodynamical simulations
Creators: name: Dubois, Yohan
name: Montero, Francisco Rodríguez
name: Guerra, Corentin
name: Trebitsch, Maxime
name: Han, San
name: Beckmann, Ricarda
name: Yi, Sukyoung K.
name: Lewis, Joseph
name: Jang, J. K.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We introduce a model for dust evolution in the RAMSES code for simulations of galaxies with a resolved multiphase interstellar medium. Dust is modelled as a fluid transported with the gas component, and is decomposed into two sizes, 5 nm and 0.1 $μ\rm m$, and two chemical compositions for carbonaceous and silicate grains. Using a suite of isolated disc simulations with different masses and metallicities, the simulations can explore the role of these processes in shaping the key properties of dust in galaxies. The simulated Milky Way analogue reproduces the dust-to-metal mass ratio (DTM), depletion factors, size distribution and extinction curves of the Milky Way. Galaxies with lower metallicities reproduce the observed decrease in the DTM with metallicity at around a few 0.1 $\rm Z_\odot$. This break in the DTM corresponds to a galactic gas metallicity threshold that marks the transition from an ejecta-dominated to an accretion-dominated grain growth, and that is different for silicate and carbonaceous grains, with $\simeq$ 0.1 $\rm Z_\odot$ and $\simeq$ 0.5 $\rm Z_\odot$ respectively. This leads to more Magellanic Cloud-like extinction curves, i.e. with steeper slopes in the ultraviolet and a weaker bump feature at 217.5 nm, in galaxies with lower masses and lower metallicities. Steeper slopes in these galaxies are caused by the combination of the higher efficiency of gas accretion by silicate relative to carbonaceous grains and by the low rates of coagulation that preserves the amount of small silicate grains. Weak bumps are due to the overall inefficient accretion growth of carbonaceous dust at low metallicity, whose growth is mostly supported by the release of large grains in SN ejecta. We also show that the formation of CO molecules is a key component to limit the ability of carbonaceous dust to grow, in particular in low-metallicity gas-rich galaxies.
description: A&A accepted
Infinite Order Hydrodynamics: An Analytical Example
Creators: name: Gavassino, Lorenzo
Publisher: name: arXiv
Year: 2024
Subjects: subject: Nuclear Theory (nucl-th)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We construct a kinetic model for matter-radiation interactions whose hydrodynamic gradient expansion can be computed analytically up to infinite order in derivatives, in the fully nonlinear regime, and for arbitrary flows. The frequency dependence of the opacity of matter is chosen to mimic the relaxation time of a self-interacting scalar field. In this way, the transient sector simulates that of a realistic quantum field theory. The gradient series is found to diverge for most flows, in agreement with previous findings. We identify, for the model at hand, the mechanism at the origin of the divergence, and we provide a successful regularization scheme. Additionally, we propose a universal qualitative framework for predicting the breakdown of the gradient expansion of an arbitrary microscopic system undergoing a given flow. This framework correctly recovers all previously known instances of gradient expansion divergence. As a new prediction, we show that the gradient expansion diverges when the energy-dependent mean free path is unbounded above.
description: 7 pages (main text) + 2 pages (supplemetary material), 2 captioned figures. Published on PRL (see https://journals.aps.org/prl/abstract/10.1103/PhysRevLett.133.032302)
Supplemental Material, HHCI_Nurse-led_diabetes_program_2018.09.24_Appendix-1 - Spirituality, Social Support, and Diabetes: A Cross-Sectional Study of People Enrolled in a Nurse-Led Diabetes Management Program in Peru
Creators: name: Sherin L. Krederdt-Araujo
name: Dominguez-Cancino, Karen A.
name: Reynelda Jiménez-Cordova
name: Paz-Villanueva, Mariella Y.
name: Fernandez, Julio Mendigure
name: Leyva-Moral, Juan M.
name: Palmieri, Patrick A.
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 111099 Nursing not elsewhere classified
subject: FOS: Health sciences
subject: 111799 Public Health and Health Services not elsewhere classified

description: Supplemental Material, HHCI_Nurse-led_diabetes_program_2018.09.24_Appendix-1 for Spirituality, Social Support, and Diabetes: A Cross-Sectional Study of People Enrolled in a Nurse-Led Diabetes Management Program in Peru by Sherin L. Krederdt-Araujo, Karen A. Dominguez-Cancino, Reynelda Jiménez-Cordova, Mariella Y. Paz-Villanueva, Julio Mendigure Fernandez, Juan M. Leyva-Moral and Patrick A. Palmieri in Hispanic Health Care International
Character Networks And Centrality
Creators: name: Rochat, Yannick
Publisher: name: Zenodo
Year: 2014
Subjects: digital literary studies
character network analysis
digital humanities
centrality
network analysis
quantitative literary studies
distant reading

description: A character network represents relations between characters from a text; the relations are based on text proximity, shared scenes/events, quoted speech, etc. Our project sketches a theoretical framework for character network analysis, bringing together narratology, both close and distant reading approaches, and social network analysis. It is in line with recent attempts to automatise the extraction of literary social networks (Elson, 2012; Sack, 2013) and other studies stressing the importance of character- systems (Woloch, 2003; Moretti, 2011).

The method we use to build the network is direct and simple. First, we extract co-occurrences from a book index, without the need for text analysis. We then describe the narrative roles of the characters, which we deduce from their respective positions in the network, i.e. the discourse.

As a case study, we use the autobiographical novel Les Confessions by Jean-Jacques Rousseau. We start by identifying co-occurrences of characters in the book index of our edition (Slatkine, 2012). Subsequently, we compute four types of centrality: degree, closeness, betweenness, eigenvector. We then use these measures to propose a typology of narrative roles for the characters.

We show that the two parts of Les Confessions, written years apart, are structured around mirroring central figures that bear similar centrality scores. The first part revolves around the mentor of Rousseau; a figure of openness. The second part centres on a group of schemers, depicting a period of deep paranoia. We also highlight characters with intermediary roles: they provide narrative links between the societies in the life of the author.

The method we detail in this complete case study of character network analysis can be applied to any work documented by an index.
H1N1 Risk and Vulnerability: Applying Intersectionality in a Pandemic Context
Creators: name: Jamison, Amelia Montgomery
Publisher: name: Digital Repository at the University of Maryland
Year: 2016
Subjects: subject: Epidemiology
subject: H1N1 Influenza
subject: Health Disparities
subject: Perceived Risk
subject: Vaccination
subject: Vulnerability

description: During influenza pandemics, existing health disparities are exacerbated, increasing vulnerability to disease among minority populations. This research utilized national survey data collected during 2009-10 H1N1 Influenza pandemic to examine the relationship between vulnerability and perceived H1N1 risk in a sample (N=1,479) of non-Hispanic White, non-Hispanic Black, and Hispanic adults and the prospective association of vulnerability and perceived H1N1 risk on vaccine uptake seven months later (N=913). Bivariate analysis and linear regression modeling were used to detect patterns in perceived H1N1 risk. Logistic regression modeling was used to test independent variables on vaccine uptake. Hispanics and non-Hispanic Blacks had higher vulnerability compared to non-Hispanic Whites. Race/ethnicity and vulnerability were significant independent predictors for perceived H1N1 risk.  We observed a positive, graded relationship between odds of vaccination and perceived H1N1 risk.
Additional file 6 of Low expression of the dynamic network markers FOS/JUN in pre-deteriorated epithelial cells is associated with the progression of colorectal adenoma to carcinoma
Creators: name: Huang, Xiaoqi
name: Han, Chongyin
name: Zhong, Jiayuan
name: Hu, Jiaqi
name: Jin, Yabin
name: Zhang, Qinqin
name: Luo, Wei
name: Liu, Rui
name: Ling, Fei
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 6: Figure S6. DNB genes drive the reversed expression of DNB neighbors.
Additional file 1 of The role of leisure-time physical activity in maintaining cervical lordosis after anterior cervical fusion and its impact on the motor function in patients with hirayama disease: a retrospective cohort analysis
Creators: name: Chen, Kaiwen
name: Yang, Yang
name: Wang, Xiaoqin
name: Zhu, Yu
name: Lyu, Feizhou
name: Jiang, Jianyuan
name: Xia, Xinlei
name: Zheng, Chaojun
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Mental Health

description: Supplementary Material 1: Supplementary Table 1
Additional file 2 of The role of leisure-time physical activity in maintaining cervical lordosis after anterior cervical fusion and its impact on the motor function in patients with hirayama disease: a retrospective cohort analysis
Creators: name: Chen, Kaiwen
name: Yang, Yang
name: Wang, Xiaoqin
name: Zhu, Yu
name: Lyu, Feizhou
name: Jiang, Jianyuan
name: Xia, Xinlei
name: Zheng, Chaojun
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Mental Health

description: Supplementary Material 2: Supplementary Table 2
Additional file 1 of Optimizing post-operative imaging: a retrospective cohort study comparing two methods of lateral hip radiography after cephalomedullary nail surgery
Creators: name: Huang, Da
name: Chen, Gui-Yue
name: Liu, Hui
name: Cui, Hai-Wen
name: Wang, Li-Xin
name: Chen, Yu-Jing
name: Yang, Xi-Shuai
Publisher: name: figshare
Year: 2024
Subjects: Space Science
Medicine
Cell Biology
Biological Sciences not elsewhere classified

description: Supplementary Material 1
Emergence of biconnected clusters in explosive percolation
Creators: name: Yang, Liwenying
name: Li, Ming
Publisher: name: arXiv
Year: 2024
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: By introducing a simple competition mechanism for bond insertion in random graphs, explosive percolation exhibits a sharp phase transition with rich critical phenomena. We investigate high-order connectivity in explosive percolation using an event-based ensemble, focusing on biconnected clusters, where any two sites are connected by at least two independent paths. Our numerical analysis confirms that explosive percolation with different intra-cluster bond competition rules shares the same percolation threshold and universality, with biconnected clusters percolating simultaneously with simply connected clusters. However, the volume fractal dimension $d_{f}'$ of biconnected clusters varies depending on the competition rules of intra-cluster bonds. The size distribution of biconnected clusters exhibits double-scaling behavior: large clusters follow the standard Fisher exponent derived from the hyperscaling relation $τ'=1+1/d_{f}'$, while small clusters display a modified Fisher exponent $τ_0<τ'$. These findings provide insights into the intricate nature of connectivity in explosive percolation.
description: 9 pages, 8 figures
Implementation of soft-constrained MPC for Tracking using its semi-banded problem structure
Creators: name: Gracia, Victor
name: Krupa, Pablo
name: Limon, Daniel
name: Alamo, Teodoro
Publisher: name: arXiv
Year: 2024
Subjects: subject: Systems and Control (eess.SY)
subject: Optimization and Control (math.OC)
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: FOS: Mathematics

description: Model Predictive Control (MPC) is a popular control approach due to its ability to consider constraints, including input and state restrictions, while minimizing a cost function. However, in practice, these constraints can result in feasibility issues, either because the system model is not accurate or due to the existence of external disturbances. To mitigate this problem, a solution adopted by the MPC community is the use of soft constraints. In this article, we consider a not-so-typical methodology to encode soft constraints in a particular MPC formulation known as MPC for Tracking (MPCT), which has several advantages when compared to standard MPC formulations. The motivation behind the proposed encoding is to maintain the semi-banded structure of the ingredients of a recently proposed solver for the considered MPCT formulation, thus providing an efficient and fast solver when compared to alternative approaches from the literature. We show numerical results highlighting the benefits of the formulation and the computational efficiency of the solver.
Title: Ensuring Open Access to the ENSO Framework under the MIT License
Creators: name: Needham, Eric
Publisher: name: Zenodo
Year: 2025
Subjects: Physics
AI
Quantum Vacuum
Fundamental Constants
Open Science
Licensing

description: This document formally licenses the ENSO framework under the MIT License to ensure open scientific access and prevent misuse. The ENSO framework introduces a novel mathematical structure linking fundamental constants, mass emergence, and vacuum dynamics. Given its potential implications for physics and artificial intelligence, this license ensures that the framework remains freely available for research while preventing corporate or private restrictions. By timestamping this document, we establish ENSO as an open scientific contribution, guaranteeing proper attribution and unrestricted exploration by the scientific community.
Additional file 3 of The role of leisure-time physical activity in maintaining cervical lordosis after anterior cervical fusion and its impact on the motor function in patients with hirayama disease: a retrospective cohort analysis
Creators: name: Chen, Kaiwen
name: Yang, Yang
name: Wang, Xiaoqin
name: Zhu, Yu
name: Lyu, Feizhou
name: Jiang, Jianyuan
name: Xia, Xinlei
name: Zheng, Chaojun
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Mental Health

description: Supplementary Material 3: Supplementary Table 3
Note Illustrative della Carta geologica d'Italia alla scala 1:50.000, F. 577 Isola di Capo Rizzuto
Creators: name: Zecchin, M.
name: Ceramicola, S.
name: Ramella, R.
name: Roda, C.
Publisher: name: INFN Open Access Repository
Year: 2014

description: Note illustrative redatte per il Foglio geologico n. 577 Isola di Capo Rizzuto della Carta Geologica d'Italia alla scala 1:50.000. 92 pp.
CEP897621 Supplemental Material2 - Supplemental material for Urine metabolomics signatures in reversible cerebral vasoconstriction syndrome
Creators: name: Wei-Hsiang Hsu
name: Shuu-Jiun Wang
name: Yen-Ming Chao
name: Chao-Jung Chen
name: Yen-Feng Wang
name: Jong-Ling Fuh
name: Shih-Pin Chen
name: Yun-Lian Lin
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 110306 Endocrinology
subject: FOS: Clinical medicine
subject: 110904 Neurology and Neuromuscular Diseases
subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: 110319 Psychiatry (incl. Psychotherapy)
subject: Neuroscience

description: Supplemental material, CEP897621 Supplemental Material2 for Urine metabolomics signatures in reversible cerebral vasoconstriction syndrome by Wei-Hsiang Hsu, Shuu-Jiun Wang, Yen-Ming Chao, Chao-Jung Chen, Yen-Feng Wang, Jong-Ling Fuh, Shih-Pin Chen and Yun-Lian Lin in Cephalalgia
Additional file 4 of The role of leisure-time physical activity in maintaining cervical lordosis after anterior cervical fusion and its impact on the motor function in patients with hirayama disease: a retrospective cohort analysis
Creators: name: Chen, Kaiwen
name: Yang, Yang
name: Wang, Xiaoqin
name: Zhu, Yu
name: Lyu, Feizhou
name: Jiang, Jianyuan
name: Xia, Xinlei
name: Zheng, Chaojun
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Mental Health

description: Supplementary Material 4: Supplementary Table 4
The Asteroseismic Imprints of Mass Transfer: A Case Study of a Binary Mass Gainer in the SPB Instability Strip
Creators: name: Wagg, Tom
name: Johnston, Cole
name: Bellinger, Earl P.
name: Renzo, Mathieu
name: Townsend, Richard
name: de Mink, Selma E.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: We present new simulations investigating the impact of mass transfer on the asteroseismic signals of slowly pulsating B stars. We use MESA to simulate the evolution of a binary star system and GYRE to compute the asteroseismic properties of the accretor star. We show that, compared to a single star of the same final mass, a star that has undergone accretion (of non-enriched material) has a significantly different internal structure, evident in both the hydrogen abundance profile and Brunt-Väisälä frequency profile. These differences result in significant changes in the observed period spacing patterns, implying that one may use this as a diagnostic to test whether a star's core has been rejuvenated as a result of accretion. We show that it is essential to consider the full multimodal posterior distributions when fitting stellar properties of mass-gainers to avoid drawing misleading conclusions. Even with these considerations, stellar ages will be significantly underestimated when assuming single star evolution for a mass-gainer. We find that future detectors with improved uncertainties would rule out single star models with the correct mass and central hydrogen fraction. Our proof of principle analysis demonstrates the need to further investigate the impact of binary interactions on stellar asteroseismic signals for a wide range of parameters, such as initial mass, amount of mass transferred and the age of the accretor star at the onset of mass transfer.
description: 10 pages (main text), 8 figures, submitted to A&A, comments welcome. Interactive plots available at https://www.tomwagg.com/html/interact/mass-gainer-asteroseismology.html
Supplemental Material, DistributiveAid_Online_appendix - Foreign Policy as Pork-barrel Spending: Incentives for Legislator Credit Claiming on Foreign Aid
Creators: name: Heinrich, Tobias
name: Peterson, Timothy M.
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 220104 Human Rights and Justice Issues
subject: FOS: Philosophy, ethics and religion
subject: 160607 International Relations
subject: FOS: Political science

description: Supplemental Material, DistributiveAid_Online_appendix for Foreign Policy as Pork-barrel Spending: Incentives for Legislator Credit Claiming on Foreign Aid by Tobias Heinrich and Timothy M. Peterson in Journal of Conflict Resolution
A Framework for Effective AI Recommendations in Cyber-Physical-Human Systems
Creators: name: Dave, Aditya
name: Bang, Heeseung
name: Malikopoulos, Andreas A.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Systems and Control (eess.SY)
subject: Artificial Intelligence (cs.AI)
subject: Human-Computer Interaction (cs.HC)
subject: Machine Learning (cs.LG)
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: FOS: Computer and information sciences

description: Many cyber-physical-human systems (CPHS) involve a human decision-maker who may receive recommendations from an artificial intelligence (AI) platform while holding the ultimate responsibility of making decisions. In such CPHS applications, the human decision-maker may depart from an optimal recommended decision and instead implement a different one for various reasons. In this letter, we develop a rigorous framework to overcome this challenge. In our framework, we consider that humans may deviate from AI recommendations as they perceive and interpret the system's state in a different way than the AI platform. We establish the structural properties of optimal recommendation strategies and develop an approximate human model (AHM) used by the AI. We provide theoretical bounds on the optimality gap that arises from an AHM and illustrate the efficacy of our results in a numerical example.
The MODEST catalog of depth-dependent spatially coupled inversions of sunspots observed by Hinode/SOT-SP
Creators: name: Durán, J. S. Castellanos
name: Milanovic, N.
name: Korpi-Lagg, A.
name: Löptien, B.
name: van Noort, M.
name: Solanki, S. K.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Physical sciences

description: We present a catalog that we named MODEST containing depth-dependent information on the atmospheric conditions inside sunspot groups of all types. The catalog is currently composed of 942 observations of 117 individual active regions with sunspots that cover all types of features observed in the solar photosphere. We use the SPINOR-2D code to perform spatially coupled inversions of the Stokes profiles observed by Hinode/SOT-SP at high spatial resolution. SPINOR-2D accounts for the unavoidable degradation of the spatial information due to the point spread function of the telescope. The sunspot sample focuses on complex sunspot groups, but simple sunspots are also part of the catalog for completeness. Sunspots were observed from 2006 to 2019, covering parts of solar cycles 23 and 24. The catalog is a living resource, as with time, more sunspot groups will be included.
description: Accepted for publication in A&A
Emergence of high-mass stars in complex fiber networks (EMERGE). I. Early ALMA Survey: observations and massive data reduction
Creators: name: Hacar, A.
name: Socci, A.
name: Bonanomi, F.
name: Petry, D.
name: Tafalla, M.
name: Harsono, D.
name: Forbrich, J.
name: Alves, J.
name: Grossschedl, J.
name: Goicoechea, J. R.
name: Pety, J.
name: Burkert, A.
name: Li, G. X.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: (Abridged) Recent molecular surveys have revealed a rich gas organization of sonic-like fibers in all kind of environments prior to the formation of low- and high-mass stars. This paper introduces the EMERGE project aiming to investigate whether complex fiber arrangements could explain the origin of high-mass stars and clusters. We analyzed the EMERGE Early ALMA Survey including 7 star-forming regions in Orion (OMC-1/2/3/4 South, L1641N, NGC2023, and Flame Nebula) homogeneously surveyed in both molecular lines (N$_2$H$^+$ J=1-0, HNC J=1-0, plus HC3N J=10-9) and 3mm-continuum using a combination of interferometric ALMA mosaics and IRAM-30m single-dish (SD) maps. Based on our low-resolution (SD) observations, we describe the global properties of our sample covering a wide range of physical conditions including low-, intermediate, and high-mass star-forming regions in different evolutionary stages. Their comparison with ancillary YSO catalogs denotes N$_2$H$^+$ as the best proxy for the dense, star-forming gas in our targets showing a constant star formation efficiency and a fast time evolution of <1 Myr. While apparently clumpy and filamentary in our SD data, all targets show a much more complex fibrous substructure at the enhanced resolution of our ALMA+IRAM-30m maps. A large number of filamentary features at sub-parsec scales are clearly recognized in the high-density gas traced by N$_2$H$^+$ directly connected to the formation of individual protostars. This complex gas organization appears to extend further into the more diffuse gas traced by HNC. This paper presents the EMERGE Early ALMA survey including a first data release of continuum maps and spectral products for this project to be analysed in future papers of this series. A first look at these results illustrates the need of advanced data combination techniques to investigate the intrinsic multi-scale, gas structure of the ISM.
description: 37 pages, 28 fgures, Accepted by A&A
Measuring Development And Access To Information: Ifla'S Plans And Opportunities For Partnership
Creators: name: Bradley, Fiona
Publisher: name: Zenodo
Year: 2015
Subjects: access to information, data, metrics, statistics, UN, libraries

description: IFLA World Library and Information Congress, Cape Town, South Africa, 15-21 August 2015. Session: Measuring the Impact of Access to Information and Development

Presentation on the contribution of libraries the UN 2030 Agenda for Sustainable Development, and efforts by the library sector to measure this contribution using existing access to information, library and other metrics. Highlights issues in statistical and other types of data collection currently globally and efforts to address these gaps.
GCMe: Efficient implementation of the Gaussian core model with smeared electrostatic interactions for molecular dynamics simulations of soft matter systems
Creators: name: Ye, Benjamin Bobin
name: Chen, Shensheng
name: Wang, Zhen-Gang
Publisher: name: arXiv
Year: 2024
Subjects: subject: Computational Physics (physics.comp-ph)
subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: In recent years, molecular dynamics (MD) simulations have emerged as a pivotal tool for understanding the structure, dynamics, and phase behavior in charged soft matter systems. To explore phenomena across greater length and time scales in MD simulations, molecules are often coarse-grained for better computational performance. However, commonly-used force fields represent particles as hard-core interaction centers with point charges, which often overemphasizes the packing effect and short-range electrostatics, especially in systems with bulky deformable organic molecules and systems with strong coarse-graining. This underscores the need for an efficient soft-core model to physically capture the effective interactions between coarse-grained particles. To this end, we implement a soft-core model uniting the Gaussian core model with smeared electrostatic interactions that is phenomenologically equivalent to recent theoretical models. We first parameterize it generically using water as the model solvent. Then, we benchmark its performance in the OpenMM toolkit for different boundary conditions to highlight a computational speedup of up to $34\times$ compared to commonly used force fields and existing implementations. Finally, we demonstrate its utility by investigating how boundary polarizability affects the adsorption behavior of a polyelectrolyte solution on perfectly conducting and nonmetal electrodes.