cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Dryland cereals and Household Food Security in Tanzania: Potential and Constraints of Improved Sorghum Cultivars
Creators: name: Schipmann-Schwarze, Christin
name: Muange, Elijah
name: Orr, Alastair
name: Mafuru, January M.
name: Schipmann-Schwarze, Christin
name: Muange, Elijah
name: Orr, Alastair
name: Mafuru, January M.
Publisher: name: Unknown
Year: 2011
Subjects: subject: Community/Rural/Urban Development
subject: Consumer/Household Economics
subject: Crop Production/Industries
subject: Food Consumption/Nutrition/Food Safety
subject: Food Security and Poverty
subject: Production Economics
subject: Research and Development/Tech Change/Emerging Technologies
subject: dryland cereals
subject: sorghum
subject: food security
subject: Tanzania

description: More than one third of the population in Africa is still facing undernourishment and malnutrition. While poor and food-insecure people are most often living in unfavourable agricultural zones, such as semi-arid areas, only few studies have assessed the potential of well adapted dryland cereals to contribute to local food security. Here, we analyze the case of sorghum in Tanzania, and particularly focus on the role of improved sorghum cultivars. Using survey data from smallholder farmers and econometric techniques, we show that sorghum contributes to the food supply of a household. Despite the promise of higher yields and better resistance of improved sorghum cultivars to some biotic and abiotic stresses, adoption rates are, however, still low. Our results indicate that access to information and diversified networks constitute serious adoption constraints. National extension systems are a major bottleneck in overcoming such constraints.
Magnetic studies of Ca1-xMxRuO3 (M=La and Sr)
Creators: name: Felner, I.
name: Asaf, U.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: CaRuO3 is a perovskite with an orthorhombic distortion and shows the characteristics of spin-glass behavior below TC=87 K. The La3+ substitution for Ca2+ in Ca1-xLaxRuO3 samples, induces a disorder in the Ca site (the A site) and the system becomes antiferromagnetically (AFM) ordered with TN = 58 and 19 K for x=0.1 x=0.5 respectively. In the Ca1-xSrxRuO3 system, the Ca0.8Sr0.2RuO3 sample is canted-AFM ordered at 107 K. The compounds with higher Sr concentration display ferromagnetic behavior and the saturation moment increases with Sr. Huge magnetic hysteresis loops are obtained at low temperatures. The coercive field (HC) decreases with Sr. For x=0.4 HC =9.5 kOe (at 5 K) whereas for SrRuO3 HC =2.4 kOe. For x=0.4 and 0.6, HC decreases sharply with temperature and than increases again with a peak at 95 and 115 K, respectively. On the other hand, for SrRuO3, HC remains practically unchanged up to 50 K and shows a peak at 90 K and than decrease sharply up to TC =165 K.
description: This paper was submitted to JMMM
Additional file 3 of Genetic diversity and population structure of Plasmodium falciparum in Nigeria: insights from microsatellite loci analysis
Creators: name: Fehintola V. Ajogbasile
name: Adeyemi T. Kayode
name: Oluniyi, Paul E.
name: Kazeem O. Akano
name: Uwanibe, Jessica N.
name: Adegboyega, Benjamin B.
name: Courage Philip
name: Oluwagboadurami G. John
name: Eromon, Philomena J.
name: Emechebe, George
name: Finimo Finimo
name: Nnenna Ogbulafor
name: Nma Jiya
name: Uche Okafor
name: Ambe, Jose
name: Robinson D. Wammanda
name: Oguche, Stephen
name: Olugbenga A. Mokuolu
name: Akintunde Sowunmi
name: Onikepe A. Folarin
name: Happi, Christian T.
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 3. Shows expected heterozygosity (He) values of microsatellite loci from parasite populations in the nine States.
Corythomantis Boulenger 1896
Creators: name: FAIVOVICH, JULIÁN
name: HADDAD, CÉLIO F. B.
name: GARCIA, PAULO C. A.
name: FROST, DARREL R.
name: CAMPBELL, JONATHAN A.
name: WHEELER, WARD C.
Publisher: name: Zenodo
Year: 2005
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Amphibia
Anura
Hylidae
Corythomantis

description: Corythomantis Boulenger, 1896
 TYPE SPECIES: Corythomantis greeningi Boulenger, 1896, by monotypy.
DIAGNOSIS: Molecular autapomorphies include 132 transformations in nuclear and mitochondrial proteins and ribosomal genes. See appendix 5 for a complete list of these transformations. Morphological autapomorphies of this monotypic genus include the absence of palatines, and nasals that conceal the alary processes of premaxillaries (Trueb, 1970a).
 CONTENTS: Monotypic. Corythomantis greeningi Boulenger, 1896.
description: Published as part of FAIVOVICH, JULIÁN, HADDAD, CÉLIO F. B., GARCIA, PAULO C. A., FROST, DARREL R., CAMPBELL, JONATHAN A. & WHEELER, WARD C., 2005, Systematic Review Of The Frog Family Hylidae, With Special Reference To Hylinae: Phylogenetic Analysis And Taxonomic Revision, pp. 1-240 in Bulletin of the American Museum of Natural History 2005 (294) on page 108, DOI: 10.1206/0003-0090(2005)294[0001:SROTFF]2.0.CO;2, http://zenodo.org/record/5363218
Spatial Statistics in Star Forming Regions: Testing the Limits of Randomness
Creators: name: Retter, Brendan
name: Hatchell, Jennifer
name: Naylor, Tim
Publisher: name: arXiv
Year: 2019
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Physical sciences

description: Observational studies of star formation reveal spatial distributions of Young Stellar Objects (YSOs) that are `snapshots' of an ongoing star formation process. Using methods from spatial statistics it is possible to test the likelihood that a given distribution process could produce the observed patterns of YSOs. The aim of this paper is to determine the usefulness of the spatial statistics tests Diggle's G function (G), the `free-space' function (F), Ripley's K and O-ring for application to astrophysical data. The spatial statistics tests were applied to simulated data containing 2D Gaussian clusters projected on random distributions of stars. The number of stars within the Gaussian cluster and number of background stars were varied to determine the tests' ability to reject complete spatial randomness (CSR) with changing signal-to-noise. The best performing test was O-ring optimised with overlapping logarithmic bins, closely followed by Ripley's K. The O-ring test is equivalent to the 2-point correlation function. Both F and G (and the minimum spanning tree, of which G is a subset) performed significantly less well, requiring a cluster with a factor of two higher signal-to-noise in order to reject CSR consistently. We demonstrate the tests on example astrophysical datasets drawn from the Spitzer catalogue.
description: 15 pages, 14 figures, 2 tables, accepted for publication in MNRAS
Additional file 2 of Genetic diversity and population structure of Plasmodium falciparum in Nigeria: insights from microsatellite loci analysis
Creators: name: Fehintola V. Ajogbasile
name: Adeyemi T. Kayode
name: Oluniyi, Paul E.
name: Kazeem O. Akano
name: Uwanibe, Jessica N.
name: Adegboyega, Benjamin B.
name: Courage Philip
name: Oluwagboadurami G. John
name: Eromon, Philomena J.
name: Emechebe, George
name: Finimo Finimo
name: Nnenna Ogbulafor
name: Nma Jiya
name: Uche Okafor
name: Ambe, Jose
name: Robinson D. Wammanda
name: Oguche, Stephen
name: Olugbenga A. Mokuolu
name: Akintunde Sowunmi
name: Onikepe A. Folarin
name: Happi, Christian T.
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 2. Shows the allelic richness values in parasite populations per microsatellite loci.
Additional file 1 of Reversible left ventricular noncompaction caused by hypertensive hydrocephalus: a pediatric case report
Creators: name: Kato, Riko
name: Taneichi, Hiromichi
name: Takarada, Shinya
name: Okabe, Mako
name: Miyao, Nariaki
name: Nakaoka, Hideyuki
name: Keijiro Ibuki
name: Ozawa, Sayaka
name: Adachi, Yuichi
name: Yoshimura, Naoki
name: Saito, Kazuyoshi
name: Fukiko Ichida
name: Hirono, Keiichi
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Computational Biology

description: Additional file 1: Figure S1. Head CT images before (A) and after (B) exacerbation of hydrocephalus. Figure S2. Serial ECG changes after admission. Table S1. List of 182 analyzed genes of NGS. Table S2. Silico predictive algorithms used in the study.
Gauge theories from wrapped and fractional branes
Creators: name: Di Vecchia, P.
name: Enger, H.
name: Imeroni, E.
name: Lozano-Tellechea, E.
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We compare two applications of the gauge/gravity correspondence to a non conformal gauge theory, based respectively on the study of D-branes wrapped on supersymmetric cycles and of fractional D-branes on orbifolds. We study two brane systems whose geometry is dual to N=4, D=2+1 super Yang-Mills theory, the first one describing D4-branes wrapped on a two-sphere inside a Calabi-Yau two-fold and the second one corresponding to a system of fractional D2/D6-branes on the orbifold R^4/Z_2. By probing both geometries we recover the exact perturbative running coupling constant and metric on the moduli space of the gauge theory. We also find a general expression for the running coupling constant of the gauge theory in terms of the "stringy volume" of the two-cycle which is involved in both types of brane systems.
description: AMS-LaTeX, 35 pages, no figures. Minor typos corrected, version to appear in NPB
System of Rice Intensification (SRI) method of rice cultivation in West Bengal (India): An Economic analysis
Creators: name: Haldar, Surajit
name: Honnaiah, T.B.
name: Govindaraj, Gurrappa Naidu
name: Haldar, Surajit
name: Honnaiah, T.B.
name: Govindaraj, Gurrappa Naidu
Publisher: name: Unknown
Year: 2012
Subjects: subject: Agricultural and Food Policy
subject: Crop Production/Industries
subject: Farm Management
subject: Production Economics
subject: system of rice intensification
subject: efficiency
subject: logit analysis

description: The economic analysis of System of Rice Intensification (SRI) vis-à-vis conventional method of rice cultivation was assessed in Bardhaman district of West Bengal during 2009-10. The cost-returns analysis of SRI method revealed that the cost of raising nursery for one ha main field transplantation was comparatively lower (Rs 954 and Rs 995) than conventional method (Rs 3654 and Rs 4503) in kharif and rabi season, respectively. However, cost of cultivation in SRI method was comparatively higher in kharif (Rs 44833), but less in rabi season (Rs 43862) as compared to conventional method (Rs 40627 and Rs 44853 in kharif and rabi) of rice cultivation. The total return per rupee of total cost was higher in SRI method (1.58 and 1.92) than in conventional method (1.25 and 1.37) in both the seasons. SRI farmers were found to be technically more efficient than conventional rice farmers. The probability of adoption increases as the literacy level increases and farmers located far away from canal. Difficulties in management practices like water management, intercultural operations along with lack of skilled labour and water scarcity especially in rabi season were the major factors constraining the adoption of SRI method.
Spin-Orbit-Torque Driven Propagating Spin Waves
Creators: name: Fulara, Himanshu
name: Zahedinejad, Mohammad
name: Khymyn, Roman
name: Awad, Ahmad
name: Muralidhar, Shreyas
name: Dvornik, Mykola
name: Åkerman, Johan
Publisher: name: arXiv
Year: 2019
Subjects: subject: Applied Physics (physics.app-ph)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Spin-orbit torque (SOT) can drive sustained spin wave (SW) auto-oscillations in a class of emerging microwave devices known as spin Hall nano-oscillators (SHNOs), which have highly non-linear properties governing robust mutual synchronization at frequencies directly amenable to high-speed neuromorphic computing. However, all demonstrations have relied on localized SW modes interacting through dipolar coupling and/or direct exchange. As nanomagnonics requires propagating SWs for data transfer, and additional computational functionality can be achieved using SW interference, SOT driven propagating SWs would be highly advantageous. Here, we demonstrate how perpendicular magnetic anisotropy can raise the frequency of SOT driven auto-oscillations in magnetic nano-constrictions well above the SW gap, resulting in the efficient generation of field and current tunable propagating SWs. Our demonstration greatly extends the functionality and design freedom of SHNOs enabling long range SOT driven SW propagation for nanomagnonics, SW logic, and neuro-morphic computing, directly compatible with CMOS technology.
Additional file 2: of Cytokit: a single-cell analysis toolkit for high dimensional fluorescent microscopy imaging
Creators: name: Czech, Eric
name: Bulent Aksoy
name: Pinar Aksoy
name: Hammerbacher, Jeff
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Hematology
subject: Plant Biology

description: Figure S2 Supplement to Fig. 10 demonstrating improvement in quantification after the inclusion of gates to remove debris and other segmentation artifacts. Cell counts from the two workflows are shown below each diameter distribution (violin with bars indicating +/− 1 s.d.) and corresponding Thermo Fisher cell counter diameter measurements are shown as colored dots. (PDF 371 kb)
Ivalia ochracea
Creators: name: Nadein, Konstantin S.
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Chrysomelidae
Ivalia
Ivalia ochracea

description: Ivalia ochracea (Gressitt & Kimoto)
 Taizonia ochracea Gressitt & Kimoto, 1963: 836. Type locality: China: Kiangsi Prov.
Distribution. China.
description: Published as part of Nadein, Konstantin S., 2013, Ivalia Jacoby-a flea beetle genus new to Australia (Coleoptera: Chrysomelidae: Galerucinae), pp. 384-400 in Zootaxa 3669 (3) on page 398, DOI: 10.11646/zootaxa.3669.3.11, http://zenodo.org/record/5266762
Macroscopic mechanical oscillators at the quantum limit using optomechanical cooling
Creators: name: Vitali, David
name: Mancini, Stefano
name: Ribichini, Luciano
name: Tombesi, Paolo
Publisher: name: arXiv
Year: 2002
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We discuss how the optomechanical coupling provided by radiation pressure can be used to cool macroscopic collective degrees of freedom, as vibrational modes of movable mirrors. Cooling is achieved using a phase-sensitive feedback-loop which effectively overdamps the mirrors motion without increasing the thermal noise. Feedback results able to bring macroscopic objects down to the quantum limit. In particular, it is possible to achieve squeezing and entanglement.
description: 15 pages, 8 figures, RevTeX
Additional file 1 of Prevalence and risk factors of Mycoplasma genitalium infection in patients attending a sexually transmitted infection clinic in Reunion Island: a cross-sectional study (2017–2018)
Creators: name: Begnis, Roxane
name: Bouscaren, Nicolas
name: Loic Raffray
name: Saint Pastou Terrier, Cécile
name: Andry, Fanny
name: Boukerrou, Malik
name: Yatrika Koumar
name: Moiton, Marie-Pierre
name: Gerardin, Patrick
name: Bertolotti, Antoine
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases
subject: 60506 Virology
subject: FOS: Biological sciences

description: Additional file 1: Appendix 1. Baseline characteristics of patients examined at Saint-Pierre STI clinic, Reunion Island (N = 2467). Appendix 2. Prevalence of Mycoplasma genitalium by sample type, sex, age, sexual behaviour and social status, Saint-Pierre STI clinic, Reunion Island (N = 2069).
Itapotihyla FAIVOVICH & HADDAD & GARCIA & FROST & CAMPBELL & WHEELER 2005, new genus
Creators: name: FAIVOVICH, JULIÁN
name: HADDAD, CÉLIO F. B.
name: GARCIA, PAULO C. A.
name: FROST, DARREL R.
name: CAMPBELL, JONATHAN A.
name: WHEELER, WARD C.
Publisher: name: Zenodo
Year: 2005
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Amphibia
Anura
Hylidae
Itapotihyla

description: Itapotihyla, new genus
 TYPE SPECIES: Hyla langsdorffii Duméril and Bibron, 1841.
DIAGNOSIS: Molecular autapomorphies include 122 transformations in nuclear and mitochondrial proteins and ribosomal genes. See appendix 5 for a complete list of these transformations. A possible morphological autapomorphy is the presence of a prominent subcloacal flap.
 ETYMOLOGY: From Itapoti 1 ­ Hyla. The generic name is an allusion to the resemblance of the unique known species of this genus with lichens and mosses. Itapoti is a Tupi­Guarani term, a composition of ‘‘ita´’’ (5 rock) with ‘‘poti’’ (5 flower or to flourish), which means lichen or moss.
 CONTENTS: Monotypic. Itapotihyla langsdorffii (Duméril and Bibron, 1841), new comb.
description: Published as part of FAIVOVICH, JULIÁN, HADDAD, CÉLIO F. B., GARCIA, PAULO C. A., FROST, DARREL R., CAMPBELL, JONATHAN A. & WHEELER, WARD C., 2005, Systematic Review Of The Frog Family Hylidae, With Special Reference To Hylinae: Phylogenetic Analysis And Taxonomic Revision, pp. 1-240 in Bulletin of the American Museum of Natural History 2005 (294) on page 109, DOI: 10.1206/0003-0090(2005)294[0001:SROTFF]2.0.CO;2, http://zenodo.org/record/5363218
Additional file 1: of Cytokit: a single-cell analysis toolkit for high dimensional fluorescent microscopy imaging
Creators: name: Czech, Eric
name: Bulent Aksoy
name: Pinar Aksoy
name: Hammerbacher, Jeff
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Computational Biology

description: Figure S1 Supplement to Fig. 8 demonstrating improvement in quantification after the inclusion of gates to remove debris and other segmentation artifacts. a CD4/CD8 cell populations for all 4 donors with both before and after groups including a terminal gate in the workflow to detect modes for each population, but all other gates left out in the â Before Quality Control Gatingâ example. b Cell population size for both replicates compared to flow cytometry measurements with improvement in correlation across populations after application of quality control gating (pearson correlation shown with significance from two-tailed t-test). (PDF 533 kb)
Additional file 1 of Efficacy and safety of gout flare prophylaxis and therapy use in people with chronic kidney disease: a Gout, Hyperuricemia and Crystal-Associated Disease Network (G-CAN)-initiated literature review
Creators: name: Pisaniello, Huai Leng
name: Fisher, Mark C.
name: Farquhar, Hamish
name: Vargas-Santos, Ana Beatriz
name: Hill, Catherine L.
name: Stamp, Lisa K.
name: Gaffo, Angelo L.
Publisher: name: figshare
Year: 2021
Subjects: subject: Space Science
subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Marine Biology
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1.
Nyctimantis Boulenger 1882
Creators: name: FAIVOVICH, JULIÁN
name: HADDAD, CÉLIO F. B.
name: GARCIA, PAULO C. A.
name: FROST, DARREL R.
name: CAMPBELL, JONATHAN A.
name: WHEELER, WARD C.
Publisher: name: Zenodo
Year: 2005
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Amphibia
Anura
Hylidae
Nyctimantis

description: Nyctimantis Boulenger, 1882
 TYPE SPECIES: Nyctimantis rugiceps Boulenger, 1882, by monotypy.
DIAGNOSIS: Molecular autapomorphies include 139 transformations in mitochondrial protein and ribosomal genes. See appendix 5 for a complete list of these molecular synapomorphies. Possible morphological autapomorphies are the development of an irregular orbital flange in the frontoparietal, and the sphenethmoid almost completely concealed dorsally by the frontoparietals and nasals (Duellman and Trueb, 1976).
 CONTENTS: Monotypic. Nyctimantis rugiceps Boulenger, 1882.
description: Published as part of FAIVOVICH, JULIÁN, HADDAD, CÉLIO F. B., GARCIA, PAULO C. A., FROST, DARREL R., CAMPBELL, JONATHAN A. & WHEELER, WARD C., 2005, Systematic Review Of The Frog Family Hylidae, With Special Reference To Hylinae: Phylogenetic Analysis And Taxonomic Revision, pp. 1-240 in Bulletin of the American Museum of Natural History 2005 (294) on page 109, DOI: 10.1206/0003-0090(2005)294[0001:SROTFF]2.0.CO;2, http://zenodo.org/record/5363218
Towards a Differentiated Modelling of Origin Effects in Hedonic Analysis:An Application to Auction Prices of Specialty Coffee
Creators: name: Teuber, Ramona
name: Herrmann, Roland
name: Teuber, Ramona
name: Herrmann, Roland
Publisher: name: Unknown
Year: 2012
Subjects: subject: Demand and Price Analysis
subject: Industrial Organization
subject: International Relations/Trade
subject: Marketing
subject: FOS: Economics and business
subject: Research Methods/ Statistical Methods
subject: Hedonic Models
subject: Specialty Coffee
subject: Origin Effects
subject: Reputation
subject: Sensory Quality

description: Origin matters. This has been shown by numerous studies using either discrete choice or hedonic approaches to derive implicit prices for origin as a product attribute. In most of the hedonic studies, intercept dummies were introduced for specific regional origins and statistically significant coefficients of those variables were seen as an indication of either a superior or inferior reputation compared to products from other origins. We argue that hedonic pricing models of this type may be too simple to detect the true origin effects if assessments of a product’s sensory quality are available and interact with prior beliefs on reputation. Based on a supply-and-demand framework to explain auction prices, a reduced-form hedonic pricing model is suggested that includes intercept- as well as slope-dummy effects of the regional origin. As reputation and the objective product quality are particularly important on markets of differentiated, high-quality foods and beverages we analyze auction markets of specialty coffees. The findings for the Cup-of-Excellence data reveal that it is important to distinguish reputation, sensory quality and their interaction as determinants of coffee auction prices as well as varying origin impacts across market segments.
Vortex dynamics and states of artificially layered superconducting films with correlated defects
Creators: name: Engel, Andreas
name: Trodahl, H. J.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: Linear resistances and $IV$-characteristics have been measured over a wide range in the parameter space of the mixed phase of multilayered a-TaGe/Ge films. Three films with varying interlayer coupling and correlated defects oriented at an angle $\approx 25$ from the film normal were investigated. Experimental data were analyzed within vortex glass models and a second order phase transition from a resistive vortex liquid to a pinned glass phase. Various vortex phases including changes from three to two dimensional behavior depending on anisotropy have been identified. Careful analysis of $IV$-characteristics in the glass phases revealed a distinctive $T$ and $H$-dependence of the glass exponent $μ$. The vortex dynamics in the Bose-glass phase does not follow the predicted behavior for excitations of vortex kinks or loops.
description: 16 pages, 10 figures, 3 tables
One String to Rule Them All: Neutrino Masses and Mixing Angles
Creators: name: Gemmill, Jordan
name: Howington, Evan
name: Mayes, Van E.
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The correct quark and charged lepton mass matrices along with a nearly correct CKM matrix may be naturally accommodated in a Pati-Salam model constructed from intersecting D6 branes on a $T^6/(\Z_2 \times \Z_2)$ orientifold. Furthermore, near-tribimaximal mixing for neutrinos may arise naturally due to the structure of the Yukawa matrices. Consistency with the quark and charged lepton mass matrices in combination with obtaining near-tribimaximal mixing fixes the Dirac neutrino mass matrix completely. Then, applying the seesaw mechanism for different choices of right-handed neutrino masses and running the obtained neutrino parameters down to the electroweak scale via the RGEs, we are able to make predictions for the neutrino masses and mixing angles. We obtain lepton mixing angles which are close to the observed values, $θ_{12} =33.8^{\circ}\pm1.2^{\circ}$, $θ_{23}=46.9^{\circ}\pm0.9^{\circ}$, and $θ_{13}=8.56^{\circ}\pm0.20^{\circ}$. In addition, the neutrino mass-squared differences are found to be $Δm^2_{32} = 0.0025\pm0.0001$~eV$^2$ and $Δm^2_{21} = 0.000075\pm0.000003$~eV with $m_1=0.0150\pm0.0002$~eV, $m_2=0.0173\pm0.0002$~eV, and $m_3=0.053\pm 0.002$~eV so that $\sum_i m_i = 0.085\pm0.002$~eV, consistent with experimental observations.
description: 13 pages, 4 figured. arXiv admin note: text overlap with arXiv:1902.00983
General structure of the photon self-energy in non-commutative QED
Creators: name: Brandt, F. T.
name: Das, Ashok
name: Frenkel, J.
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We study the behavior of the photon two point function, in non-commutative QED, in a general covariant gauge and in arbitrary space-time dimensions. We show, to all orders, that the photon self-energy is transverse. Using an appropriate extension of the dimensional regularization method, we evaluate the one-loop corrections, which show that the theory is renormalizable. We also prove, to all orders, that the poles of the photon propagator are gauge independent and briefly discuss some other related aspects.
description: 16 pages, revtex4. This is the final version to be published in Phys. Rev. D
Axion Structure Formation II: The Wrath of Collapse
Creators: name: Lentz, Erik W.
name: Quinn, Thomas R.
name: Rosenberg, Leslie J
Publisher: name: arXiv
Year: 2019
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The first paper in this series showed that QCD axion dark matter, as a highly-correlated Bose fluid, contains extra-classical physics on cosmological scales. The nature of the derived extra-classical physics is exchange-correlation interactions induced by the constraints of symmetric particle exchange and inter-axion correlations from self-gravitation. The paper also showed that the impact of extra-classical physics on early structure formation is marginal, as the exchange-correlation interaction is inherently non-linear. This paper continues the study of axion structure formation into the non-linear regime by now considering the case of full collapse and virialization. The N-body method is chosen to solve the collapse problem, and its algorithms are derived for a condensed Bose fluid. Simulations of isolated gravitational collapse are performed for both Bose and cold dark matter fluids using a prototype N-body code. Unique Bose structures are found to survive even the most violent collapses. Bose post-collapse features include dynamical changes to global structures, creation of new broad substructures, violations of classical binding energy conditions, and new fine structures. Effective models of the novel structures are constructed and possibilities for their discovery are discussed.
description: 29 pages, 27 figures
Changes in Hungarian Agri-Food Trade Since EU accession
Creators: name: Jambor, Attila
name: Hubbard, Lionel J.
name: Jambor, Attila
name: Hubbard, Lionel J.
Publisher: name: Unknown
Year: 2012
Subjects: subject: Agricultural and Food Policy
subject: International Relations/Trade
subject: EU accession
subject: agri-food trade
subject: revealed comparative advantages

description: In 2004, Hungary joined the European Union (EU) along with nine other countries. One of the major changes resulting from this was the transformation of these countries’ agri-food trade. The paper analyses the effects of EU accession on Hungarian primary and processed agri-food trade, using revealed symmetric comparative advantage based on the most recent available data. Results suggest that accession has enhanced the value of trade relations with the EU. Hungary’s agri-food imports have increased faster than agri-food exports, but the trade balance remains at around €1 billion, similar to its pre-accession level. Both exports and imports are highly and increasingly concentrated, by country and by product group, with exports based mainly on bulk raw materials and imports based principally on processed products. Revealed comparative advantages have weakened after accession. Indeed, the majority of products reveal a comparative disadvantage over the entire period, and this majority was larger in the post-accession period. Regarding stability, accession has radically changed the survival time of agri-food trade, in that revealed comparative advantage is shown not to be persistent. From the policy perspective, there is a clear need for radical structural changes in Hungarian agriculture and the agri-food sector. The most important long-term goal should be the production and export of higher value-added processed products based on domestic raw materials.
Additional file 1: of Novel mutations in actionable breast cancer genes by targeted sequencing in an ethnically homogenous cohort
Creators: name: Hosneara Akter
name: Sultana, Nasima
name: Nazrana Martuza
name: Aaysha Siddiqua
name: Nushrat Dity
name: Md. Rahaman
name: Bisan Samara
name: Sayeed, Ahmed
name: Basiruzzaman, Mohammed
name: Rahman, Mohammad
name: Md. Rashidul Hoq
name: Md. Amin
name: Md. Baqui
name: Woodbury-Smith, Marc
name: K. Uddin
name: Islam, Syed
name: Rayhana Awwal
name: Bakhrom Berdiev
name: Uddin, Mohammed
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Pharmacology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology
subject: Computational Biology

description: Supplementary Information. Table S1. Detail of BRCA1 primers used. Table S2. Detail of BRCA2 primers used. Table S3. Detail of ERBB2 primers used. Table S4. Detail of TP53 primers used. Table S5. Detail of multiplex PCR. Table S6. Detail of primers for Sanger sequencing. Table S7. Detail of the history of study cases who have mutations. (DOCX 41 kb)
Application of the scattering rate sum-rule to the interplane optical conductivity of high temperature superconductors: pseudogap and bi-layer effects
Creators: name: Shah, N.
name: Millis, A. J.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: We use a recently proposed model of the interplane conductivity of high temperature superconductors to investigate the `scattering rate sum-rule' introduced by Basov and co-workers. We present a new derivation of the sum-rule. The quantal and thermal fluctuations of the order parameter which have been argued to produce the observed pseudogap behavior are shown to increase the total integrated `scattering rate' but may either increase or decrease the `quasiparticle' contribution from frequencies greater than twice the superconducting gap.
description: 4 pages, 5 figures, revised
Additional file 2 of Coaching to develop leadership for healthcare managers: a mixed-method systematic review protocol
Creators: name: Hu, Shuang
name: Chen, Wenjun
name: Hu, Huiping
name: Huang, Wenqiu
name: Chen, Jia
name: Hu, Jiale
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Information Systems not elsewhere classified
subject: Developmental Biology

description: Additional file 2. Sample search strategy.
Ivalia oculata
Creators: name: Nadein, Konstantin S.
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Chrysomelidae
Ivalia
Ivalia oculata

description: Ivalia oculata (Samuelson)
 Amphimeloides oculatus Samuelson, 1966: 429. Type locality: New Guinea: Nondugl.
Distribution. New Guinea.
description: Published as part of Nadein, Konstantin S., 2013, Ivalia Jacoby-a flea beetle genus new to Australia (Coleoptera: Chrysomelidae: Galerucinae), pp. 384-400 in Zootaxa 3669 (3) on page 398, DOI: 10.11646/zootaxa.3669.3.11, http://zenodo.org/record/5266762
A Cross-Whiskers Junction as a Novel Fabrication Process for Intrinsic Josephson Junction
Creators: name: Takano, Yoshihiko
name: Hatano, Takeshi
name: Fukuyo, Akihiro
name: Ishii, Akira
name: Arisawa, Shunichi
name: Tachiki, Masashi
name: Togano, Kazumasa
Publisher: name: arXiv
Year: 2002
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: A Bi2Sr2CaCu2O8+d cross-whiskers junction has been successfully discovered as a novel intrinsic Josephson junction without using any technique for micro-fabrication. Two Bi2Sr2CaCu2O8+d whisker crystals were placed crosswise on a MgO substrate and heated at 850C for 30 min. They were electrically connected at their c-planes. The measurement terminals were made at the four ends of the whiskers. The I-V characteristics of the cross-whiskers junction at 5K were found to show a clear multiple-branch structure with a spacing of approximately 15 mV that is a feature of the intrinsic Josephson junction. The critical current density Jc was estimated to be 1170 A/cm2. The branch-structure was strongly suppressed by the magnetic field above 1kOe.
description: 4 pages, PDF file
Additional file 6: of Batch effect exerts a bigger influence on the rat urinary metabolome and gut microbiota than uraemia: a cautionary tale
Creators: name: Randall, David
name: Kieswich, Julius
name: Swann, Jonathan
name: McCafferty, Kieran
name: Thiemermann, Christoph
name: Curtis, Michael
name: Hoyles, Lesley
name: Yaqoob, Muhammed
Publisher: name: figshare
Year: 2019
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy

description: R code for microbiome analysis (DOCX 25 kb)
Osteocephalus Steindachner 1862
Creators: name: FAIVOVICH, JULIÁN
name: HADDAD, CÉLIO F. B.
name: GARCIA, PAULO C. A.
name: FROST, DARREL R.
name: CAMPBELL, JONATHAN A.
name: WHEELER, WARD C.
Publisher: name: Zenodo
Year: 2005
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Amphibia
Anura
Hylidae
Osteocephalus

description: Osteocephalus Steindachner, 1862
 TYPE SPECIES: Osteocephalus taurinus Steindachner, 1862, by subsequent designation of Kellogg (1932).
DIAGNOSIS: This genus is diagnosed by 34 transformations in nuclear and mitochondrial protein and ribosomal genes. See appendix 5 for a complete list of these molecular synapomorphies. We are not aware of any morphological synapomorphy supporting this genus.
 CONTENTS: Seventeen species. Osteocephalus buckleyi (Boulenger, 1882); Osteocephalus cabrerai (Cochran and Goin, 1970); Osteocephalus deridens Jungfer, Ron, Seipp, and Almendáriz, 2000; Osteocephalus elkejungingerae (Henle, 1981); Osteocephalus exophthalmus Smith and Noonan, 2001; Osteocephalus fuscifacies Jungfer, Ron, Seipp, and Almendáriz, 2000; Osteocephalus heyeri Lynch, 2002; Osteocephalus leoniae Jungfer and Lehr, 2001; Osteocephalus leprieurii (Duméril and Bibron, 1841); Osteocephalus mutabor Jungfer and Hödl, 2002; Osteocephalus oophagus Jungfer and Schiesari, 1995; Osteocephalus pearsoni (Gaige, 1929); Osteocephalus planiceps Cope, 1874; Osteocephalus subtilis Martins and Cardoso, 1987; Osteocephalus taurinus Steindachner, 1862; Osteocephalus verruciger (Werner, 1901); Osteocephalus yasuni Ron and Pramuk, 1999.
description: Published as part of FAIVOVICH, JULIÁN, HADDAD, CÉLIO F. B., GARCIA, PAULO C. A., FROST, DARREL R., CAMPBELL, JONATHAN A. & WHEELER, WARD C., 2005, Systematic Review Of The Frog Family Hylidae, With Special Reference To Hylinae: Phylogenetic Analysis And Taxonomic Revision, pp. 1-240 in Bulletin of the American Museum of Natural History 2005 (294) on page 109, DOI: 10.1206/0003-0090(2005)294[0001:SROTFF]2.0.CO;2, http://zenodo.org/record/5363218
Additional file 1 of Inferring and analyzing gene regulatory networks from multi-factorial expression data: a complete and interactive suite
Creators: name: Cassan, Océane
name: Lèbre, Sophie
name: Martin, Antoine
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Statistics
subject: FOS: Mathematics

description: Additional file 1 Full description of the procedure of importance measures empirical testing. the files gives more details about the methodological choices for the procedure.
Ivalia ornata Medvedev
Creators: name: Nadein, Konstantin S.
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Chrysomelidae
Ivalia
Ivalia ornata

description: Ivalia ornata Medvedev
 Ivalia ornata Medvedev, 2010a: 296. Type locality: Borneo: Sabah.
Distribution. Borneo.
description: Published as part of Nadein, Konstantin S., 2013, Ivalia Jacoby-a flea beetle genus new to Australia (Coleoptera: Chrysomelidae: Galerucinae), pp. 384-400 in Zootaxa 3669 (3) on page 398, DOI: 10.11646/zootaxa.3669.3.11, http://zenodo.org/record/5266762
Steering Eco-Evolutionary Games Dynamics with Manifold Control
Creators: name: Wang, Xin
name: Zheng, Zhiming
name: Fu, Feng
Publisher: name: arXiv
Year: 2019
Subjects: subject: Physics and Society (physics.soc-ph)
subject: FOS: Physical sciences

description: Feedback loops between population dynamics of individuals and their ecological environment are ubiquitously found in nature, and have shown profound effects on the resulting eco-evolutionary dynamics. Incorporating linear environmental feedback law into replicator dynamics of two-player games, recent theoretical studies shed light on understanding the oscillating dynamics of social dilemma. However, detailed effects of more general nonlinear feedback loops in multi-player games, which is more common especially in microbial systems, remain unclear. Here, we focus on ecological public goods games with environmental feedbacks driven by nonlinear selection gradient. Unlike previous models, multiple segments of stable and unstable equilibrium manifolds can emerge from the population dynamical systems. We find that a larger relative asymmetrical feedback speed for group interactions centered on cooperators not only accelerates the convergence of stable manifolds, but also increases the attraction basin of these stable manifolds. Furthermore, our work offers an innovative manifold control approach: by designing appropriate switching control laws, we are able to steer the eco-evolutionary dynamics to any desired population states. Our mathematical framework is an important generalization and complement to coevolutionary game dynamics, and also fills the theoretical gap in guiding the widespread problem of population state control in microbial experiments.
Additional file 1 of Natural course of metabolically healthy phenotype and risk of developing Cardiometabolic diseases: a three years follow-up study
Creators: name: Elías-López, Daniel
name: Vargas-Vázquez, Arsenio
name: Roopa Mehta
name: Bautista, Ivette Cruz
name: Olvera, Fabiola Del Razo
name: Donaji Gómez-Velasco
name: Valdes, Paloma Almeda
name: Aguilar-Salinas, Carlos A.
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Pharmacology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Additional file 1: Table S1. Baseline characteristics of groups according to BMI and metabolic health. Abbreviations; T2D: Type 2 diabetes: CVD; Cardiovascular disease: BMI; Body mass index. Table S2. Predictors to identify participants who progress/revert to a metabolically healthy/metabolically unhealthy phenotype. Abbreviations; T2D: Type 2 diabetes: CVD; Cardiovascular disease: BMI; Body mass index. Table S3. Univariate analysis to evaluate factors associated with the transitions according to metabolic health. Abbreviations: BMI; Body mass index: WHtR; Waist-height ratio. Table S4. Factors associated with progression according to metabolic health and BMI. Abbreviations: BMI; Body mass index: WHtR; Waist-height ratio. Table S5. Factors associated with reversion according to metabolic health and BMI. Abbreviations: BMI; Body mass index: WHtR; Waist-height ratio.
Osteopilus Fitzinger 1843
Creators: name: FAIVOVICH, JULIÁN
name: HADDAD, CÉLIO F. B.
name: GARCIA, PAULO C. A.
name: FROST, DARREL R.
name: CAMPBELL, JONATHAN A.
name: WHEELER, WARD C.
Publisher: name: Zenodo
Year: 2005
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Amphibia
Anura
Hylidae
Osteopilus

description: Osteopilus Fitzinger, 1843
 TYPE SPECIES: Trachycephalus marmoratus Duméril and Bibron, 1841 (5 Hyla septentrionalis Duméril and Bibron, 1841).
 Calyptahyla Trueb and Tyler, 1974. Type species: Trachycephalus lichenatus Gosse, 1851 (5 Hyla crucialis Harlan, 1826), by original designation.
DIAGNOSIS: This genus is diagnosed by 43 transformations in nuclear and mitochondrial protein and ribosomal genes. See appendix 5 for a complete list of these molecular synapomorphies. No morphological synapomorphies are known for this genus.
 CONTENTS: Eight species. Osteopilus brunneus (Gosse, 1851); Osteopilus crucialis (Harlan, 1826); Osteopilus dominicensis (Tschudi, 1838); Osteopilus marianae (Dunn, 1926); Osteopilus pulchrilineatus (Cope ‘‘1869’’ [1870]); Osteopilus septentrionalis (Duméril and Bibron, 1841); Osteopilus vastus (Cope, 1871); Osteopilus wilderi (Dunn, 1925).
description: Published as part of FAIVOVICH, JULIÁN, HADDAD, CÉLIO F. B., GARCIA, PAULO C. A., FROST, DARREL R., CAMPBELL, JONATHAN A. & WHEELER, WARD C., 2005, Systematic Review Of The Frog Family Hylidae, With Special Reference To Hylinae: Phylogenetic Analysis And Taxonomic Revision, pp. 1-240 in Bulletin of the American Museum of Natural History 2005 (294) on page 109, DOI: 10.1206/0003-0090(2005)294[0001:SROTFF]2.0.CO;2, http://zenodo.org/record/5363218
A Clinical Approach to Training Effective Data Scientists
Creators: name: Rodolfa, Kit T
name: De Unanue, Adolfo
name: Gee, Matt
name: Ghani, Rayid
Publisher: name: arXiv
Year: 2019
Subjects: subject: Computers and Society (cs.CY)
subject: Artificial Intelligence (cs.AI)
subject: FOS: Computer and information sciences

description: Like medicine, psychology, or education, data science is fundamentally an applied discipline, with most students who receive advanced degrees in the field going on to work on practical problems. Unlike these disciplines, however, data science education remains heavily focused on theory and methods, and practical coursework typically revolves around cleaned or simplified data sets that have little analog in professional applications. We believe that the environment in which new data scientists are trained should more accurately reflect that in which they will eventually practice and propose here a data science master's degree program that takes inspiration from the residency model used in medicine. Students in the suggested program would spend three years working on a practical problem with an industry, government, or nonprofit partner, supplemented with coursework in data science methods and theory. We also discuss how this program can also be implemented in shorter formats to augment existing professional masters programs in different disciplines. This approach to learning by doing is designed to fill gaps in our current approach to data science education and ensure that students develop the skills they need to practice data science in a professional context and under the many constraints imposed by that context.
description: 18 pages, 3 figures, 2 tables
Additional file 2 of Natural course of metabolically healthy phenotype and risk of developing Cardiometabolic diseases: a three years follow-up study
Creators: name: Elías-López, Daniel
name: Vargas-Vázquez, Arsenio
name: Roopa Mehta
name: Bautista, Ivette Cruz
name: Olvera, Fabiola Del Razo
name: Donaji Gómez-Velasco
name: Valdes, Paloma Almeda
name: Aguilar-Salinas, Carlos A.
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Pharmacology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Additional file 2:. Questionnaire.
Additional file 1 of Palliative Performance Scale and survival in patients with cancer and non-cancer diagnoses needing a palliative care consultation: a retrospective cohort study
Creators: name: Patcharaporn Prompantakorn
name: Chaisiri Angkurawaranon
name: Kanokporn Pinyopornpanish
name: Chutarattanakul, Lalita
name: Chanchanok Aramrat
name: Chanapat Pateekhum
name: Nisachol Dejkriengkraikul
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Cell Biology
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1.
Additional file 1 of Proactive psychological programs designed to mitigate posttraumatic stress injuries among at-risk workers: a systematic review and meta-analysis
Creators: name: Di Nota, Paula M.
name: Bahji, Anees
name: Groll, Dianne
name: Carleton, R. Nicholas
name: Anderson, Gregory S.
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 1.