cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 3: Figure S3. of Diesel exhaust alters the response of cultured primary bronchial epithelial cells from patients with chronic obstructive pulmonary disease (COPD) to non-typeable Haemophilus influenzae
Creators: name: Zarcone, Maria
name: Schadewijk, Annemarie Van
name: Duistermaat, Evert
name: Hiemstra, Pieter
name: Kooter, Ingeborg
Publisher: name: Figshare
Year: 2017
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Physiology
subject: Pharmacology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Mental Health
subject: Plant Biology

description: NTHi-induced inflammatory, antimicrobial response and HSPA5/BiP induction. Cellular response of 5 non-COPD and 7 COPD donors treated for 3Â h with UV-NTHi added to the apical side. CXCL8 (3A), DEFB4A (3B), S100A7 (3C) and HSPA5/BiP (3D) mRNA expression is reported as fold from untreated controls after normalization on two reference genes, ATP5b and RPL13A. (PDF 492Â kb)
ADVANCEMENTS IN AQUAPONICS: LEVERAGING IOT FOR ENHANCED WATER QUALITY CONTROL IN AQUACULTURE
Creators: name: Samantha, Smith
Publisher: name: Continental Journal
Year: 2024
Subjects: Aquaponics, hydroponics, Internet of Things (IoT), automated system, water quality

description: Aquaponics systems have emerged as an innovative and sustainable approach that interconnects recirculating aquaculture and hydroponics, synergizing their benefits. This integration capitalizes on the nutrient-rich effluents generated within the aquaculture environment, which traditionally accumulate to hazardous levels for aquatic life. However, in the context of aquaponics, these effluents are repurposed as potent liquid fertilizers, nurturing plant growth and thereby mitigating the accumulation of toxins [1]. Concurrently, the rapid evolution of the Internet of Things (IoT) technology has unveiled a global network of interconnected devices, machines, and sensors, engendering autonomous interactions and seamless data exchange [2]. Capitalizing on IoT, the present study orchestrates an Automated Aquaponic System empowered by smart sensors and microcontrollers. By continuously monitoring crucial parameters, the system provides real-time insights through a user-friendly graphical interface, transcending spatial limitations. In this paper, we delve into the necessity of maintaining optimal water quality within aquaponic environments, elucidating conventional methods employed for water quality assessment [4]. Leveraging the potential of IoT, Section 3 introduces the paradigm of automated aquaponics, wherein a microcontroller collects and transmits data to a web repository
Additional file 1: of Snacks, beverages, and physical activity during volunteer-led out-of-school-time programs: a cross-sectional analysis
Creators: name: Economos, Christina
name: Anzman-Frasca, Stephanie
name: Koomas, Alyssa
name: Chan, Grace
name: Folta, Sara
name: Heck, Julianne
name: Newman, Molly
name: Sacheck, Jennifer
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Cell Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences

description: Description of key snack, beverage, and PA items. (DOCX 18Â kb)
Rapport d'activité 2020 des BU de l'UPHF
Creators: name: Université Polytechnique Hauts-de-France
Publisher: name: Zenodo
Year: 2023
Subjects: Rapport d'activité
Pilotage

description: Rapport d'activité du Service Commun de la Documentation de l'Université Polytechnique Hauts-de-France pour l'année 2020.
MOESM7 of Differences in meristem size and expression of branching genes are associated with variation in panicle phenotype in wild and domesticated African rice
Creators: name: K. Ta
name: H. Adam
name: Y. Staedler
name: J. SchĂśnenberger
name: T. Harrop
name: J. Tregear
name: N. Do
name: P. Gantet
name: A. GhesquiĂ¨Re
name: S. Jouannic
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biophysics
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Additional file 7. miR156 and miR529 recognition sites in SPL14 mRNA target in O. sativa (OsSPL14), O. glaberrima (OgSPL14) and O. barthii (ObSPL14). The single nucleotide change in O. sativa from C to A at the Osa-miR156 targeted site in OsSPL14 as reported in the japonica cultivars Aikawa1 and Shaoniejing (SNJ) by [24, 25], respectively, is highlighted in red. Numbers above the sequence indicate the location of the nucleotide in the OsSPL14 coding sequence. Dots indicate identical nucleotide sequences in the region corresponding to the recognition sites of Osa-miR156 and Osa-miR529.
Additional file 2: of Snacks, beverages, and physical activity during volunteer-led out-of-school-time programs: a cross-sectional analysis
Creators: name: Economos, Christina
name: Anzman-Frasca, Stephanie
name: Koomas, Alyssa
name: Chan, Grace
name: Folta, Sara
name: Heck, Julianne
name: Newman, Molly
name: Sacheck, Jennifer
Publisher: name: Figshare
Year: 2017
Subjects: subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology

description: OST-SBPA items and additional questions. (DOCX 19Â kb)
Kamopanorpa aristovi SUKATSHEVA & SINITSHENKOVA 2023, sp. nov.
Creators: name: SUKATSHEVA, IRINA D.
name: SINITSHENKOVA, NINA D.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Mecoptera
Microptysmatidae
Kamopanorpa
Kamopanorpa aristovi

description: Kamopanorpa aristovi Sukatsheva & Sinitshenkova sp. nov.
(Fig. 1)
Holotype. PIN, no 3695/141, part and counterpart of the caddisfly fore wing of good preservation.
Etymology. The new species is named in memory of the late palaeoentomologist Daniil S. Aristov.
Diagnosis. The fore wing of K. aristovi sp. nov. is of medium size, RS and M branching almost at the same level, the fork on R is absent, RS seven-branched.
Locality and horizon. The Kostovaty site, Middle Urals, Udmurtya, right bank of the Kama River, 1.3 km upstream of the Kostovaty village and 6.4 km downstream of the Galevo pier. The deposits of Ilyinskaya Member in Lower Urzhum Formation of Urzhum Horizon are dated to the Middle Permian.
Description. Fore wing rather narrow, length almost three times width, with greatest width at level of SC entering anterior wing margin. Anterior margin straight, apex broadly rounded. SC long, straight, ending in middle of third quarter of wing length. Costal area at wing base twice as wide as at wing apex, crossed by four crossveins. Subcostal area wide in its middle part, R straight, long, with very slight scooplike bend at apex. RS 1 simple, with straight crossvein r-rs 1+2. RS base at beginning of second quarter of wing length, RS seven-branched. RS 1+2 stem 2.6× as long as RS 3+4 stem. F 1 three-branched, F 2 four-branched. Additional fork on RS 2 of medium size, shorter than that on RS 4 and significantly longer than that on RS 3. F 1 fork 0,6× as long as F 2 fork. Cells DC and MC open. M with five branches, forks slightly distal to RS fork almost at the middle of wing. M 2, M 3 and M 4 simple. M 1 bifurcation short, almost equal in length to its trunk. CuA fork of same size as M 1 fork. Long arcuate cross vein m 3+4 -cua 1+2 present. Y-shaped vein not visible. CuP simple, short, entering wing trailing margin separately from A 1. A 2 long, 0.76× as long as A 1 and 2.6× so as A 3. Anal field narrow. Wing membrane with no coloration. Wing length 8.0 mm, width 3.5 mm.
Remarks. According to the type of branching of RS and M (almost at the same level), the size of the forewing, the absence of a fork on R the described new species is closest to K. grossa Novokshonov, 1993 from the same locality of Kostovaty, differing from it in the much longer stems of R 1+4 and M 1 +3 and an open DC. The new species differs from all other species of the genus Kamopanorpa, including K. grossa, by its seven-branched RS (Martynov, 1933; Sukatsheva, 1976: Novokshonov, 1992, 1993; Sukatsheva & Aristov, 2017).
description: Published as part of SUKATSHEVA, IRINA D. & SINITSHENKOVA, NINA D., 2023, A new caddisfly species Kamopanorpa aristovi sp. nov. of the family Microptysmatidae (Insecta, Trichoptera) from the Middle Permian of Udmurtya, Russia, pp. 120-123 in Palaeoentomology 6 (2) on pages 120-121, DOI: 10.11646/palaeoentomology.6.2.3, http://zenodo.org/record/7942954
MOESM7 of Differences in meristem size and expression of branching genes are associated with variation in panicle phenotype in wild and domesticated African rice
Creators: name: K. Ta
name: H. Adam
name: Y. Staedler
name: J. SchĂśnenberger
name: T. Harrop
name: J. Tregear
name: N. Do
name: P. Gantet
name: A. GhesquiĂ¨Re
name: S. Jouannic
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biophysics
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Additional file 7. miR156 and miR529 recognition sites in SPL14 mRNA target in O. sativa (OsSPL14), O. glaberrima (OgSPL14) and O. barthii (ObSPL14). The single nucleotide change in O. sativa from C to A at the Osa-miR156 targeted site in OsSPL14 as reported in the japonica cultivars Aikawa1 and Shaoniejing (SNJ) by [24, 25], respectively, is highlighted in red. Numbers above the sequence indicate the location of the nucleotide in the OsSPL14 coding sequence. Dots indicate identical nucleotide sequences in the region corresponding to the recognition sites of Osa-miR156 and Osa-miR529.
Additional file 11: Figure S4. of Vitiligo blood transcriptomics provides new insights into disease mechanisms and identifies potential novel therapeutic targets
Creators: name: Dey-Rao, Rama
name: Animesh Sinha
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Hematology

description: Ontology enrichment analysis of 35 VL-blood associated DEGs that mapped to six chromosomal â  hot spotsâ  . (PDF 901 kb)
Additional file 1: of Targeting functional fitness, hearing and health-related quality of life in older adults with hearing loss: Walk, Talk 'n' Listen, study protocol for a pilot randomized controlled trial
Creators: name: Lambert, Justin
name: Ghadry-Tavi, Rouzbeh
name: Knuff, Kate
name: Jutras, Marc
name: Siever, Jodi
name: Mick, Paul
name: Roque, Carolyn
name: Jones, Gareth
name: Little, Jonathan
name: Miller, Harry
name: Bergen, Colin Van
name: Kurtz, Donna
name: Murphy, Mary
name: Jones, Charlotte
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy

description: CONSORT checklist for pilot trials. (DOCX 46 kb)
title: Comparison of Conduction Pacing, Conventional RV Pacing, and CRT (Bivenctricular) Pacing Parameters
Creators: name: Ramadani, Oltion
Publisher: name: TU Wien
Year: 2024
Subjects: subject: cardiac pacmaker
subject: pacing lead
subject: triboelectric sensing

description: The comparative analysis of Right Ventricular (RV), Left Bundle Branch (LBB), and Cardiac Resynchronization Therapy (CRT) pacing modalities is pivotal for optimizing patient outcomes in individuals requiring cardiac pacing. This study evaluates key parameters—QRS duration, impedance, sensing, and threshold values—across these pacing methods, highlighting their physiological and clinical impacts. Data were collected during both implant procedures and routine follow-ups. During the implant phase, measurements were obtained in a sterile environment with patients connected to a 12-lead ECG and the EP Tracer system, while pacing lead positioning was guided by signals derived directly from the lead. Key parameters such as pacing threshold, sensing, and impedance were measured using the Medtronic CareLink 2090 programmer. For follow-up data, patients were connected to a 12-lead ECG, and pacing was temporarily disabled to capture native QRS durations, followed by measurements under RV, LV, or LBB pacing.RV pacing, while widely used, often results in prolonged QRS duration, leading to interventricular dyssynchrony and potential long-term adverse outcomes, including pacing-induced cardiomyopathy. The non-physiological activation sequence associated with RV pacing raises concerns about its long-term efficacy. In contrast, LBB pacing represents an innovative approach aimed at achieving more physiological ventricular activation by directly stimulating the conduction system. This method has demonstrated shorter QRS durations compared to RV pacing, mitigating the risks of dyssynchrony and improving ventricular function. However, the technical challenges associated with LBB lead placement highlight the importance of operator experience and patient selection.CRT remains the gold standard for patients with heart failure and wide QRS complexes, particularly those with left bundle branch block (LBBB). The ability of CRT to resynchronize ventricular contraction and reduce QRS duration has been associated with significant improvements in cardiac function, reduced hospitalization rates, and enhanced survival. This study confirms the efficacy of CRT in achieving optimal resynchronization, though it also emphasizes the need for careful patient selection and consideration of anatomical factors that may influence lead placement and overall device performance.The findings of this research underscore the critical role of individualized pacing strategies in optimizing cardiac function and patient outcomes. While LBB pacing offers a less invasive and potentially more physiological alternative to CRT, particularly in patients with narrow QRS complexes, CRT remains indispensable for those with significant dyssynchrony.
Additional file 1 of Controlling bias and inflation in epigenome- and transcriptome-wide association studies using the empirical null distribution
Creators: name: Iterson, Maarten Van
name: Zwet, Erik Van
name: Heijmans, Bastiaan
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Computational Biology

description: Additional figures and tables. Additional Figures S1, S2, S3, S4, and S5. Additional Tables S1. and S2. (534 KB PDF)
TASHKILOTDA KOMPYUTER TARMOQLARINI TAHLIL QILISH VA OPTIMALLASHTIRISH
Creators: name: Darmonov, Muxammadyusuf
name: Boymatov, M.
Publisher: name: Zenodo
Year: 2025

description: Zamonaviy tashkilotlarda kompyuter tarmoqlari uzluksiz aloqani, ma'lumot almashishni va umumiy biznes faoliyatini ta'minlashda muhim ahamiyatga ega. Ushbu tarmoqlarning optimallashtirilishi va tahlil qilinishi tashkilotning umumiy samaradorligini oshirish uchun zarur. Maqolada tashkilotlardagi kompyuter tarmoqlarini tahlil qilish va optimallashtirish bo‘yicha asosiy usullar va strategiyalar ko‘rib chiqiladi. Tarmoq trafigini tahlil qilish, nosozliklarni bartaraf etish, resurslarni taqsimlash va tarmoqni samarali boshqarish masalalari muhokama qilinadi. Shuningdek, maqolada Software-Defined Networking (SDN), Network Function Virtualization (NFV) va sun'iy intellekt (SI) kabi yangi texnologiyalar tarmoqni boshqarishda qanday foydalanilishi haqida so‘z boradi. Ushbu usullar va texnologiyalarni qo‘llash orqali tashkilotlar tarmoq samaradorligini oshirishi, xarajatlarni kamaytirishi va foydalanuvchi tajribasini yaxshilashi mumkin.
Additional file 1: of The Self-help Online against Suicidal thoughts (SOS) trial: study protocol for a randomized controlled trial
Creators: name: MĂźhlmann, Charlotte
name: Madsen, Trine
name: HjorthĂ¸J, Carsten
name: Kerkhof, Ad
name: Nordentoft, Merete
name: Erlangsen, Annette
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences

description: SPIRIT Checklist. (DOC 121 kb)
Additional file 8: of Administration of multipotent mesenchymal stromal cells restores liver regeneration and improves liver function in obese mice with hepatic steatosis after partial hepatectomy
Creators: name: Ezquer, Fernando
name: Bahamonde, Javiera
name: Huang, Ya-Lin
name: Ezquer, Marcelo
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Hematology

description: Donor MSCs proliferate in the liver of 70% hepatectomized mice. Normal and obese mice received 5 × 105 MSCsGPF post-Hpx. Two, 10 and 30 days later, the proliferation of donor cells was evaluated by colocalization of GFP (Alexa Fluor 488 – green) and Ki67 immunoreactivity (Alexa Fluor 555 – red). Nuclei were counterstained with DAPI (blue). Representative micrographs of donor MSCGFP proliferation in the liver parenchyma 10 days after their administration. (PDF 216 kb)
AJP Peripheral Supplemental Materials
Creators: name: Kelliher, Julia C.
name: Maric, Ivana
name: G. Engeland, Christopher
name: Shearer, Gregory
name: Skibicka, Karolina P.
Publisher: name: figshare
Year: 2024
Subjects: classificationCode: 310114
subject: Systems biology
classificationCode: 320803
subject: Systems physiology

description: This study examines previously unexplored sex differences in oxylipin signaling cascade activation in the central nervous system and periphery during the acute phase response. This is the first study to assess and correlate oxylipins in plasma HDL and CSF in males and females following an acute systemic inflammatory challenge. This work showing reduced concentrations of anti-inflammatory omega 3 EPA-derived DiHETEs in acutely inflamed females provides molecular insight into sex differences in immunity and inflammation-induced neurological changes.
Additional file 1: of The Self-help Online against Suicidal thoughts (SOS) trial: study protocol for a randomized controlled trial
Creators: name: MĂźhlmann, Charlotte
name: Madsen, Trine
name: HjorthĂ¸J, Carsten
name: Kerkhof, Ad
name: Nordentoft, Merete
name: Erlangsen, Annette
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Cancer
subject: Mental Health

description: SPIRIT Checklist. (DOC 121 kb)
AI-driven non-intrusive uncertainty quantification of advanced nuclear fuels for digital twin-enabling technology
Creators: name: Kobayashi, Kazuma
name: Kumar, Dinesh
name: Alam, Syed Bahauddin
Publisher: name: arXiv
Year: 2022
Subjects: subject: Computation (stat.CO)
subject: Applications (stat.AP)
subject: FOS: Computer and information sciences

description: In response to the urgent need to establish AI/ML-integrated Digital Twin (DT) technology within next-generation nuclear systems, advancements in modeling methods and simulation codes are necessary. The increased complexity of models demands significant computational resources to quantify their uncertainties. To address this challenge, a data-driven non-intrusive uncertainty quantification method via polynomial chaos expansion is introduced as an efficient strategy within the finite element analysis-based fuel performance code BISON. Models of and fuels, alongside SiC/SiC cladding material, were prepared to demonstrate the proposed method. The impact of four independent uncertain input variables on the system output was quantified, requiring fewer than 100 BISON simulations for each model. This approach not only accelerates the modeling and simulation task but also enhances the reliability in the development of DT-enabling technologies.
Sinoennea Kobelt 1904
Creators: name: Tanmuangpak, Kitti
name: Dumrongrojwattana, Pongrat
name: Tumpeesuwan, Chanidaporn
name: Tumpeesuwan, Sakboworn
Publisher: name: Zenodo
Year: 2015
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Stylommatophora
Streptaxidae
Sinoennea

description: Genus Sinoennea Kobelt, 1904
Type species. Ennea strophioides Gredler, 1881
description: Published as part of Tanmuangpak, Kitti, Dumrongrojwattana, Pongrat, Tumpeesuwan, Chanidaporn & Tumpeesuwan, Sakboworn, 2015, Sinoennea loeiensis, a new species of diapherid microsnail (Pulmonata: Streptaxoidea: Diapheridae) from Phu Pha Lom Limestone Hill, Loei Province, Northeastern Thailand, pp. 293-300 in Raffles Bulletin of Zoology 63 on page 296, DOI: 10.5281/zenodo.4502341
Zatypota bohemani
Creators: name: Varga, Oleksandr
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Ichneumonidae
Zatypota
Zatypota bohemani

description: Zatypota bohemani (Holmgren, 1860)
Records. Ukraine (Kasparyan, 1981), Transcarpathian Region (Varga, 2018b).
Material examined. Kharkiv Reg.: 3 ♀, Vovchansk Distr., Yefremivka, SN, 27.vii.1984, leg. A. Kotenko.
Distribution. Holarctic; Ukraine: Kharkiv and Transcarpathian Regs.
Biology. CMF, PS. July–August.
description: Published as part of Varga, Oleksandr, 2019, Taxonomy and distribution of pimpline parasitoids (Hymenoptera, Ichneumonidae, Pimplinae) in Ukraine, pp. 1-65 in Zootaxa 4693 (1) on page 47, DOI: 10.11646/zootaxa.4693.1.1, http://zenodo.org/record/3529018
Device Modeling Bias in ReRAM-based Neural Network Simulations
Creators: name: Yousuf, Osama
name: Hossen, Imtiaz
name: Daniels, Matthew W.
name: Lueker-Boden, Martin
name: Dienstfrey, Andrew
name: Adam, Gina C.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Emerging Technologies (cs.ET)
subject: Machine Learning (cs.LG)
subject: FOS: Computer and information sciences

description: Data-driven modeling approaches such as jump tables are promising techniques to model populations of resistive random-access memory (ReRAM) or other emerging memory devices for hardware neural network simulations. As these tables rely on data interpolation, this work explores the open questions about their fidelity in relation to the stochastic device behavior they model. We study how various jump table device models impact the attained network performance estimates, a concept we define as modeling bias. Two methods of jump table device modeling, binning and Optuna-optimized binning, are explored using synthetic data with known distributions for benchmarking purposes, as well as experimental data obtained from TiOx ReRAM devices. Results on a multi-layer perceptron trained on MNIST show that device models based on binning can behave unpredictably particularly at low number of points in the device dataset, sometimes over-promising, sometimes under-promising target network accuracy. This paper also proposes device level metrics that indicate similar trends with the modeling bias metric at the network level. The proposed approach opens the possibility for future investigations into statistical device models with better performance, as well as experimentally verified modeling bias in different in-memory computing and neural network architectures.
Thermodynamic crossovers in supercritical fluids
Creators: name: Li, Xinyang
name: Jin, Yuliang
Publisher: name: arXiv
Year: 2023
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: Can liquid-like and gas-like states be distinguished beyond the critical point, where the liquid-gas phase transition no longer exists and conventionally only a single supercritical fluid phase is defined? Recent experiments and simulations report strong evidence of dynamical crossovers above the critical temperature and pressure. Despite using different criteria, many existing theoretical explanations consider a single crossover line separating liquid-like and gas-like states in the supercritical fluid phase. We argue that such a single-line scenario is inconsistent with the supercritical behavior of the Ising model, which has two crossover lines due to its symmetry, violating the universality principle of critical phenomena. To reconcile the inconsistency, we define two thermodynamic crossover lines in supercritical fluids as boundaries of liquid-like, indistinguishable, and gas-like states. Near the critical point, the two crossover lines follow critical scalings with exponents of the Ising universality class, supported by calculations of theoretical models and analyses of experimental data from the standard database. The upper line agrees with crossovers independently estimated from the inelastic X-ray scattering data of supercritical argon, and from the small-angle neutron scattering data of supercritical carbon dioxide. The lower line is verified by the equation of states for the compressibility factor. This work provides a fundamental framework for understanding supercritical physics in general phase transitions.
description: 24 pages, 22 figures
BLOKCHEYN TEXNOLOGIYASING AFZALLIKLARI VA KAMCHILIKLARI
Creators: name: Qodirov, Farrux
name: Ganchiyev, Jo`rabek
Publisher: name: Zenodo
Year: 2024

description: Bu maqola blokcheyn texnologiyasing afzalliklari va kamchiliklari haqida malumot beradi. Blokcheyn texnologiyasini tanlashning eng asosiy maqsadi, xavfsiz tarmoq orqali operatsiyalarni amalga oshirish yoki ma’lumot almashishdir. Blokcheyn texnologiyasining xavfsizligi, samarodrligi, auditi, masshtabligi, maxfiyligi malumotlarni saqlashi va bir qator vazifalari bo’yicha afzalliklari va kamchiliklari bor. Blokcheyn shartnomalar va biznesdan biznesga tranzaksiyalarni samaraliroq qiladi.
Additional file 1: of Cord blood cell-derived iPSCs as a new candidate for chondrogenic differentiation and cartilage regeneration
Creators: name: Yoojun Nam
name: Yeri Rim
name: Jung, Seung
name: Ju, Ji
Publisher: name: Figshare
Year: 2017
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Further characterization of three hiPSC lines generated from CBMCs. a Karyotype images of the generated CBMC-hiPSCs. b Immunofluorescence image of CBMC-hiPSCs differentiated to ectoderm (Otx2), mesoderm (Brachyury) and endoderm (Sox17). All scale bars represent 200Â Îźm. (PDF 278Â kb)
Additional file 2 of Controlling bias and inflation in epigenome- and transcriptome-wide association studies using the empirical null distribution
Creators: name: Iterson, Maarten Van
name: Zwet, Erik Van
name: Heijmans, Bastiaan
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Ecology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Marine Biology
subject: 60506 Virology

description: Additional text. In the Additional text we prove that genomic control is equivalent to the use of an empirical null distribution. Furthermore, a sketch of a proof is given to show that the omission of a variable introduces bias, and we briefly describe how we impute white blood cell counts. The last section describes all participants and institutes that were involved in the generation of the BIOS data collection. (202 KB PDF)
Additional file 2 of Controlling bias and inflation in epigenome- and transcriptome-wide association studies using the empirical null distribution
Creators: name: Iterson, Maarten Van
name: Zwet, Erik Van
name: Heijmans, Bastiaan
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Ecology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Marine Biology
subject: Virology

description: Additional text. In the Additional text we prove that genomic control is equivalent to the use of an empirical null distribution. Furthermore, a sketch of a proof is given to show that the omission of a variable introduces bias, and we briefly describe how we impute white blood cell counts. The last section describes all participants and institutes that were involved in the generation of the BIOS data collection. (202 KB PDF)
Additional file 1: of Cord blood cell-derived iPSCs as a new candidate for chondrogenic differentiation and cartilage regeneration
Creators: name: Yoojun Nam
name: Yeri Rim
name: Jung, Seung
name: Ju, Ji
Publisher: name: Figshare
Year: 2017
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences

description: Further characterization of three hiPSC lines generated from CBMCs. a Karyotype images of the generated CBMC-hiPSCs. b Immunofluorescence image of CBMC-hiPSCs differentiated to ectoderm (Otx2), mesoderm (Brachyury) and endoderm (Sox17). All scale bars represent 200Â Îźm. (PDF 278Â kb)
ReXErr: Synthesizing clinically meaningful errors in diagnostic radiology reports
Creators: name: Rao, Vishwanatha M
name: Zhang, Serena
name: Acosta, Julian N
name: Adithan, Subathra
name: Rajpurkar, Pranav
Publisher: name: F1000 Research Limited
Year: 2024

description: Accurately interpreting medical images and writing radiology reports is a difficult yet clinically significant task. In addition to placing an immense burden upon the healthcare system, manually written radiology reports are prone to human oversights including, but not limited to, clinical inaccuracies as well as grammatical and spelling errors. While automated report-generation algorithms show great promise in improving healthcare efficiency, model-generated reports are liable to different forms of errors, with more frequent discrepancies in diagnoses and varying linguistic mistakes. There is a need for more expansive datasets that capture this broad range of errors to better tune future models and potentially train report- correction algorithms. To this end, we introduce a new methodology that leverages LLMs to generate representative clinician and model errors within chest X-ray reports, using error categories developed in collaboration with board-certified radiologists. We propose a novel sampling scheme to ensure that the different classes of errors are injected at comparable frequencies as well as a modular pipeline to improve the diversity and clinical precision of the errors generated through our prompts. Our method, ReXErr, demonstrates impressive diversity, clinical plausibility, and consistency across all categories of the errors injected. We believe our methodology can serve as a baseline for future LLM-based synthetic medical datasets.
Additional file 1: Figure S1. of Bariatric surgery emphasizes biological sex differences in rodent hepatic lipid handling
Creators: name: Grayson, Bernadette
name: Gutierrez-Aguilar, Ruth
name: Sorrell, Joyce
name: Matter, Emily
name: Adams, Michelle
name: Howles, Philip
name: Karns, Rebekah
name: Seeley, Randy
name: Sandoval, Darleen
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy

description: Hepatic gene changes in females following VSG and sham surgeries. Gray bars designate categories that were down-regulated in VSG. Black bars designate genes that were up-regulated in VSG. B. Gene lists for categories of gene changes exhibited in panel A (nâ  =â  3/group). (PDF 112 kb)
Method to deterministically generate large-amplitude optical cat states
Creators: name: Li, Zheng-Hong
name: Yu, Fei
name: Li, Zhen-Ya
name: Al-Amri, M.
name: Zubairy, M. Suhail
Publisher: name: arXiv
Year: 2023
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Cat states, as an important resource in the study of macroscopic quantum superposition and quantum information applications, have garnered widespread attention. To date, preparing large-sized optical cat states has remained challenging. We demonstrate that, by utilizing interaction-free measurement and the quantum Zeno effect, even a fragile quantum microscopic system can deterministically control and become entangled with strong light fields, thereby generating large-amplitude optical cat states. During the entire preparation process, our method ensures that the microscopic system functions within a weak field environment, so that its quantum property can be protected. Furthermore, we show that the preparation of cat states is possible even when the quantum microsystem suffers from significant photon loss, provided that optical losses from classical devices are kept low, which implies that the fidelity of the cat state can be enhanced by improvements to and the perfection of the classical optical system.
TASVIRLARDAGI OBYEKTLAR VA NAQSHLARNI TANIB OLISH UCHUN MASHINANI O'RGANISH ALGORITMLARDAN FOYDALANISH
Creators: name: Sodiqov, Odilbek
Publisher: name: Zenodo
Year: 2025

description: Ushbu maqolada mashinani o'rganish algoritmlarining tasvirlardagi obyektlar va naqshlarni tanib olishdagi qo'llanilishi, jumladan CNN, RNN, LSTM va GAN texnikalari, shuningdek, ularning tibbiyot, avtomobil sanoati, xavfsizlik va dizayn sohalaridagi ahamiyati ko'rib chiqiladi.
Additional file 7: of Administration of multipotent mesenchymal stromal cells restores liver regeneration and improves liver function in obese mice with hepatic steatosis after partial hepatectomy
Creators: name: Ezquer, Fernando
name: Bahamonde, Javiera
name: Huang, Ya-Lin
name: Ezquer, Marcelo
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Hematology

description: Donor MSCs persist near blood vessels and space of Disse in the liver of 70% hepatectomized mice. Normal and obese mice received 5 × 105 MSCsGFP post-Hpx. The presence of donor cells was evaluated by GFP immunoreactivity (Alexa Fluor 488 – green), nuclei were counterstained with DAPI (cyan) and blood vessel were identified by phase contrast and marked by a red dashed line. Representative micrographs of donor MSCsGFP 2 and 30 days after administration. (PDF 383 kb)
Infographie résultats LibQUAL+ 2023 SCD Université Polytechnique Hauts-de-France
Creators: name: Oustlant, Christopher
name: Université Polytechnique Hauts-de-France
Publisher: name: Zenodo
Year: 2024

description: Cette infographie, réalisée en 2024 par le Service Commun de la Documentation de l'Université Polytechnique Hauts-de-France, présente les résultats de l'évaluation menée en 2023 avec le dispositif LibQUAL+.
Periodic Solutions of the parabolic-elliptic Keller-Segel system on whole spaces
Creators: name: Xuan, Pham Truong
name: Van Thuy, Tran
name: Van Anh, Nguyen Thi
name: Loan, Nguyen Thi
Publisher: name: arXiv
Year: 2023
Subjects: subject: Analysis of PDEs (math.AP)
subject: Differential Geometry (math.DG)
subject: Dynamical Systems (math.DS)
subject: Functional Analysis (math.FA)
subject: FOS: Mathematics

description: In this paper, we investigate to the existence and uniqueness of periodic solutions for the parabolic-elliptic Keller-Segel system on whole spaces detailized by Euclidean space $\mathbb{R}^n\,\,(\hbox{ where }n \geqslant 4)$ and real hyperbolic space $\mathbb{H}^n\,\, (\hbox{where }n \geqslant 2)$. We work in framework of scritical spaces such as on weak-Lorentz space $L^{\frac{n}{2},\infty}(\mathbb{R}^n)$ to obtain the results for Keller-Segel system on $\mathbb{R}^n$ and on $L^{\frac{p}{2}}(\mathbb{H}^n)$ for $n
description: 19 pages, some errors were fixed
A family of explicit Waring decompositions of a polynomial
Creators: name: Han, Kangjin
name: Moon, Hyunsuk
Publisher: name: arXiv
Year: 2023
Subjects: subject: Commutative Algebra (math.AC)
subject: Numerical Analysis (math.NA)
subject: Algebraic Geometry (math.AG)
subject: Functional Analysis (math.FA)
subject: FOS: Mathematics
subject: 14P99, 12D05, 13P10, 14A25, 15A21, 14N15

description: In this paper we settle some polynomial identity which provides a family of explicit Waring decompositions of any monomial $X_0^{a_0}X_1^{a_1}\cdots X_n^{a_n}$ over a field $\Bbbk$. This gives an upper bound for the Waring rank of a given monomial and naturally leads to an explicit Waring decomposition of any homogeneous form and, eventually, of any polynomial via (de)homogenization. Note that such decomposition is very useful in many applications dealing with polynomial computations, symmetric tensor problems and so on. We discuss some computational aspect of our result as comparing with other known methods and also present a computer implementation for potential use in the end.
description: 18 pages, Macaulay 2 code included
Additional file 1: of Mitochondrial mutations and metabolic adaptation in pancreatic cancer
Creators: name: Rae-Anne Hardie
name: Dam, Ellen Van
name: Cowley, Mark
name: Han, Ting-Li
name: Balaban, Seher
name: Pajic, Marina
name: Pinese, Mark
name: Iconomou, Mary
name: Shearer, Robert
name: McKenna, Jessie
name: Miller, David
name: Waddell, Nicola
name: Pearson, John
name: Grimmond, Sean
name: Sazanov, Leonid
name: Biankin, Andrew
name: Villas-Boas, Silas
name: Hoy, Andrew
name: Turner, Nigel
name: Saunders, Darren
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Cancer
subject: Inorganic Chemistry
subject: 60506 Virology
subject: Computational Biology

description: Figure S1: Sanger sequencing traces from matched normal, primary tumour and PDCL for TKCC-10, showing the presence of a somatic heteroplasmic insertion in primary tumour, which progresses to homoplasmy in the PDCL. Table S1: Nuclear mitochondrial and metabolic genes analysed for somatic mutations. Table S2: Detailed description of function in nuclear mitochondrial and metabolic genes with non-synonymous mutations in PDCLs. Table S3: Intracellular metabolites (n=72) targeted in metabolomics analaysis. (PDF 990Â kb)
Full Bell-basis measurement of an atom-photon 2-qubit state and its application for quantum networks
Creators: name: Arenskötter, Elena
name: Kucera, Stephan
name: Elshehy, Omar
name: Bergerhoff, Max
name: Kreis, Matthias
name: Brunel, Léandre
name: Eschner, Jürgen
Publisher: name: arXiv
Year: 2023
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The efficiency of a Bell-state measurement on photon pairs is bound to 50\,\% due to the number of Bell states that can be distinguished using linear optics. Here we present the implementation of a protocol that allows us to distinguish all four Bell states by the use of a single-ion quantum memory and heralded absorption as state-selective measurement. The protocol is implemented in two steps. First we demonstrate the state-preserving mapping of a photonic qubit onto the quantum memory, verified by the preservation of entanglement in the process. Then we demonstrate the full Bell state projection between a memory qubit and an incoming photonic qubit, by applying it for atom-to-photon quantum state teleportation.
description: changed title, abstract, introduction, and conclusion
Assessment of ambient air microplastic deposition along land use gradient using lichenised fungi Phaeophyscia hispidula (Ach.) Moberg in the westernHimalayas
Creators: name: Rai, Himanshu
name: Kumar Gupta, Rajan
Publisher: name: figshare
Year: 2024
Subjects: classificationCode: 310303
subject: Ecological physiology

description: The first study on microplastic biomonitoring using lichens from Asia
Additional file 1: of Mitochondrial mutations and metabolic adaptation in pancreatic cancer
Creators: name: Rae-Anne Hardie
name: Dam, Ellen Van
name: Cowley, Mark
name: Han, Ting-Li
name: Balaban, Seher
name: Pajic, Marina
name: Pinese, Mark
name: Iconomou, Mary
name: Shearer, Robert
name: McKenna, Jessie
name: Miller, David
name: Waddell, Nicola
name: Pearson, John
name: Grimmond, Sean
name: Sazanov, Leonid
name: Biankin, Andrew
name: Villas-Boas, Silas
name: Hoy, Andrew
name: Turner, Nigel
name: Saunders, Darren
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Cancer
subject: Inorganic Chemistry
subject: Virology
subject: Computational Biology

description: Figure S1: Sanger sequencing traces from matched normal, primary tumour and PDCL for TKCC-10, showing the presence of a somatic heteroplasmic insertion in primary tumour, which progresses to homoplasmy in the PDCL. Table S1: Nuclear mitochondrial and metabolic genes analysed for somatic mutations. Table S2: Detailed description of function in nuclear mitochondrial and metabolic genes with non-synonymous mutations in PDCLs. Table S3: Intracellular metabolites (n=72) targeted in metabolomics analaysis. (PDF 990Â kb)
Improved generalization with deep neural operators for engineering systems: Path towards digital twin
Creators: name: Kobayashi, Kazuma
name: Daniell, James
name: Alam, Syed Bahauddin
Publisher: name: arXiv
Year: 2023
Subjects: subject: Machine Learning (cs.LG)
subject: Applications (stat.AP)
subject: Computation (stat.CO)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: Neural Operator Networks (ONets) represent a novel advancement in machine learning algorithms, offering a robust and generalizable alternative for approximating partial differential equations (PDEs) solutions. Unlike traditional Neural Networks (NN), which directly approximate functions, ONets specialize in approximating mathematical operators, enhancing their efficacy in addressing complex PDEs. In this work, we evaluate the capabilities of Deep Operator Networks (DeepONets), an ONets implementation using a branch/trunk architecture. Three test cases are studied: a system of ODEs, a general diffusion system, and the convection/diffusion Burgers equation. It is demonstrated that DeepONets can accurately learn the solution operators, achieving prediction accuracy scores above 0.96 for the ODE and diffusion problems over the observed domain while achieving zero shot (without retraining) capability. More importantly, when evaluated on unseen scenarios (zero shot feature), the trained models exhibit excellent generalization ability. This underscores ONets vital niche for surrogate modeling and digital twin development across physical systems. While convection-diffusion poses a greater challenge, the results confirm the promise of ONets and motivate further enhancements to the DeepONet algorithm. This work represents an important step towards unlocking the potential of digital twins through robust and generalizable surrogates.
Zatypota discolor
Creators: name: Varga, Oleksandr
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Ichneumonidae
Zatypota
Zatypota discolor

description: Zatypota discolor (Holmgren, 1860) (Fig. 16a, c)
Records. Ivano-Frankivsk and Transcarpathian Regions (Varga, 2018b).
Material examined. Kharkiv Reg.: 3 ♀, Vovchansk Distr., Yefremivka, SN, 19.vii.1984, leg. M. Narolsky; 1 ♀, idem, SN, 27.vii.1984, leg. A. Kotenko; 3 ♀, idem, SN, 15.viii.1985, leg. M. Narolsky; Transcarpathian Reg.: 1 ♂, Uzhgorod, Dravtsi, SN, 18.viii.1955, leg. N. Telenga.
Distribution. Palaearctic; Ukraine: Ivano-Frankivsk, Kharkiv and Transcarpathian Regs.
Biology. CMF, PS, PMF. July–August.
description: Published as part of Varga, Oleksandr, 2019, Taxonomy and distribution of pimpline parasitoids (Hymenoptera, Ichneumonidae, Pimplinae) in Ukraine, pp. 1-65 in Zootaxa 4693 (1) on page 47, DOI: 10.11646/zootaxa.4693.1.1, http://zenodo.org/record/3529018
Additional file 2: of Epigenetic modifying enzyme expression in asthmatic airway epithelial cells and fibroblasts
Creators: name: Stefanowicz, Dorota
name: Ullah, Jari
name: Lee, Kevin
name: Furquan Shaheen
name: Ekiomoado Olumese
name: Fishbane, Nick
name: Hyun-Kyoung Koo
name: Teal Hallstrand
name: Knight, Darryl
name: Tillie-Louise Hackett
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Supplementary Methods. (DOCX 24Â kb)
Fully Sparse Fusion for 3D Object Detection
Creators: name: Li, Yingyan
name: Fan, Lue
name: Liu, Yang
name: Huang, Zehao
name: Chen, Yuntao
name: Wang, Naiyan
name: Zhang, Zhaoxiang
Publisher: name: arXiv
Year: 2023
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: Currently prevalent multimodal 3D detection methods are built upon LiDAR-based detectors that usually use dense Bird's-Eye-View (BEV) feature maps. However, the cost of such BEV feature maps is quadratic to the detection range, making it not suitable for long-range detection. Fully sparse architecture is gaining attention as they are highly efficient in long-range perception. In this paper, we study how to effectively leverage image modality in the emerging fully sparse architecture. Particularly, utilizing instance queries, our framework integrates the well-studied 2D instance segmentation into the LiDAR side, which is parallel to the 3D instance segmentation part in the fully sparse detector. This design achieves a uniform query-based fusion framework in both the 2D and 3D sides while maintaining the fully sparse characteristic. Extensive experiments showcase state-of-the-art results on the widely used nuScenes dataset and the long-range Argoverse 2 dataset. Notably, the inference speed of the proposed method under the long-range LiDAR perception setting is 2.7 $\times$ faster than that of other state-of-the-art multimodal 3D detection methods. Code will be released at \url{https://github.com/BraveGroup/FullySparseFusion}.
description: TPMAI 2024