cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 2: Figure S1–S4. of MetaPro-IQ: a universal metaproteomic approach to studying human and mouse gut microbiota
Creators: name: Zhang, Xu
name: Zhibin Ning
name: Mayne, Janice
name: Moore, Jasmine
name: Li, Jennifer
name: Butcher, James
name: Deeke, Shelley
name: Chen, Rui
name: Cheng-Kang Chiang
name: Wen, Ming
name: Mack, David
name: Stintzi, Alain
name: Figeys, Daniel
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified

description: Figure S1. Analysis of murine fecal metaproteome data in the study of Tanca et al. using MetaPro-IQ approach. (A) Venn diagrams depicting the overlap of identified peptides between the two replicates; (B) scatter plot illustrating the Pearson’s correlation between the LFQ intensity of all peptides identified in both replicates; (C) and (E) showing the overlap of identified peptides between two runs for replicate 1 and replicate 2, respectively; (D) and (F) showing the Pearson’s correlation between the LFQ intensity of all peptides identified in both runs for replicate 1 and replicate 2, respectively. Detailed information on the sample information of murine fecal metaproteome (MFM) data was described in the study of Tanca et al. Figure S2. Effects of diet on the mouse body weight gain. Statistical differences were examined with two-sample t test. Mean ± SD was shown. *p
Sonnenfleckenzeichnung Nr. 71.
Zeichnung von Flecken und Fackelflächen zur Ermittlung der Sonnenaktivität am 02.04.1986, 11:30, erstellt von Michele Bianda, Sonnenobservatorium Specola Solare Ticinese in Locarno
Creators: name: Observatorium Specola Solare Ticinese Locarno (1957 bis 1980 Teil der Eidgenössischen Sternwarte der ETH Zürich)
Publisher: name: [s.n.]
Year: 1986

description: Bleistiftzeichnung mit schwarzer Farbe und Bleistift, erstellt als Projektionsbildzeichnung für die Beobachtungen in Locarno-Monti auf einem eigenen Vordruck. Instrument: Zeiss-Coudé-Refraktor mit 15 cm Öffnung und 225 cm Brennweite. Bildqualität (SIDC): 4.
Die Beobachtungen zu Einzelflecken und zu Sonnenfleckengruppen wurden auf dem Vordruck eingetragen. Zusätzlich sind zuhanden der späteren statistischen Verarbeitung die Angaben für die Bestimmung der Fleckenrelativzahl notiert.
Beobachtungstätigkeit unter eigenständiger Leitung (Associazione Specola Solare Ticinese ASST)
Statistics of Microlensing Caustic Crossings in Q~2237+0305: Peculiar Velocity of the Lens Galaxy and Accretion Disk Size
Creators: name: Mediavilla, E.
name: Jimenez-Vicente, J.
name: Muñoz, J. A.
name: Mediavilla, T.
name: Ariza, O.
Publisher: name: arXiv
Year: 2014
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: We use the statistics of caustic crossings induced by microlensing in the lens system Q~2237+0305 to study the lens galaxy peculiar velocity. We calculate the caustic crossing rates for a comprehensive family of stellar mass functions and find a dependence of the average number of caustic crossings with the effective transverse velocity and the average mass, $\langle n \rangle \propto {v_{eff} / \sqrt{\langle m \rangle}}$, equivalent to the theoretical prediction for the case of microlenses with identical masses. We explore the possibilities of the method to measure $v_{eff}$ using the $\sim$12 years of OGLE monitoring of the four images of Q 2237+0305. To determine a lower limit for $v_{eff}$ we count, conservatively, a single caustic crossing for each one of the 4 high magnification events identified in the literature (plus one additional proposed by us) obtaining $v_{eff} \gtrsim 240\sqrt{\langle m \rangle/0.17M_\odot}\rm\,km\, s^{-1}$ at 68\% of confidence. From this value and the average $FWHM$ of 4 high magnification events we obtain a lower limit of $r_s \gtrsim 1.4 \sqrt{\langle m \rangle/0.17M_\odot}$ light-days for the radius of the source ($r_s=FWHM/2.35$). Tentative identification of 3 additional caustic crossing events leads to estimates of $v_{eff}\simeq (493\pm 246)\sqrt{\langle m \rangle/0.17M_\odot}\rm\,km\, s^{-1}$ for the effective transverse velocity and of $r_s \simeq (2.7\pm 1.3)\sqrt{\langle m \rangle/0.17M_\odot}$ light-days for the source size. The estimated transverse peculiar velocity of the galaxy is $v_t \simeq(429\pm246)\sqrt{\langle m \rangle/0.17M_\odot}\rm\,km\, s^{-1}$.
Disentanglement of intrinsic and extrinsic side-jump scattering induced spin Hall effect in N-implanted Pt
Creators: name: Shashank, Utkarsh
name: Nakamura, Yoji
name: Kusaba, Yu
name: Tomoda, Takafumi
name: Nongjai, Razia
name: Kandasami, Asokan
name: Medwal, Rohit
name: Rawat, Rajdeep Singh
name: Asada, Hironori
name: Gupta, Surbhi
name: Fukuma, Yasuhiro
Publisher: name: arXiv
Year: 2022
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The rapidly evolving utilization of spin Hall effect (SHE) arising from spin-orbit coupling in 5d transition metals and alloys have made giant strides in the development of designing low-power, robust and non-volatile magnetic memory. Recent studies, on incorporating non-metallic lighter elements such as oxygen, nitrogen and sulfur into 5d transition metals, have shown an enhancement in damping-like torque efficiency θ_DL due to the modified SHE, but the mechanism behind this enhancement is not clear. In this paper, we study θ_DL at different temperatures (100-293 K) to disentangle the intrinsic and extrinsic side-jump scattering induced spin Hall effect in N-implanted Pt. We observe a crossover of intrinsic to extrinsic side-jump mechanism as the implantation dose increases from 2*10^16 ions/cm2 to 1*10^17 ions/cm2. A sudden decrease in the intrinsic spin Hall conductivity is counterbalanced by the increase in the side-jump induced SHE efficiency. These results conclude that studying θ_DL as a function of implantation dose, and also as a function of temperature, is important to understand the physical mechanism contributing to SHE, which has so far been unexplored in incorporating non-metallic element in 5d transition metals.
Sizing multimodal suspensions with differential dynamic microscopy
Creators: name: Bradley, Joe J
name: Martinez, Vincent A
name: Arlt, Jochen
name: Royer, John R
name: Poon, Wilson C K
Publisher: name: arXiv
Year: 2023
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: Differential dynamic microscopy (DDM) can be used to extract mean particle size from videos of suspensions. However, many suspensions have multimodal particle size distributions (PSDs), for which this is not a sufficient description. After clarifying how different particle sizes contribute to the signal in DDM, we show that standard DDM analysis can extract the mean sizes of two populations in a bimodal suspension given prior knowledge of the sample's bimodality. Further, the use of the CONTIN algorithm obviates the need for such prior knowledge. Finally, we show that by selectively analysing portions of the DDM images, we can size a trimodal suspension where the large particles would otherwise dominate the signal, again without prior knowledge of the trimodality.
description: Main Body: 10 pages, 8 figures. Appendix: 5 pages, 6 figures. Manuscript accepted at Soft Matter with open access licence; for version of record see https://doi.org/10.1039/D3SM00593C. Relevant data available at https://doi.org/10.7488/ds/3851
Comparative analysis of atmospheric parameters from high-resolution spectroscopic sky surveys: APOGEE, GALAH, Gaia-ESO
Creators: name: Hegedűs, Viola
name: Mészáros, Szabolcs
name: Jofré, Paula
name: Stringfellow, Guy S.
name: Feuillet, Diane
name: García-Hernández, Domingo Aníbal
name: Nitschelm, Christian
name: Zamora, Olga
Publisher: name: arXiv
Year: 2022
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: SDSS-IV APOGEE-2, GALAH and Gaia-ESO are high resolution, ground-based, multi-object spectroscopic surveys providing fundamental stellar atmospheric parameters and multiple elemental abundance ratios for hundreds of thousands of stars of the Milky Way. We undertake a comparison between the most recent data releases of these surveys to investigate the accuracy and precision of derived parameters by placing the abundances on an absolute scale. We discuss the correlations in parameter and abundance differences as a function of main parameters. Uncovering the variants provides a basis to on-going efforts of future sky surveys. Quality samples from the APOGEE-GALAH, APOGEE-GES and GALAH-GES overlapping catalogs are collected. We investigate the mean variants between the surveys, and linear trends are also investigated. We compare the slope of correlations and mean differences with the reported uncertainties. The average and scatter of vrad, Teff, log g, [M/H] and vmicro, along with numerous species of elemental abundances in the combined catalogs show that in general there is a good agreement between the surveys. We find large radial velocity scatters ranging from 1.3 km/s to 4.4 km/s when comparing the three surveys. We observe weak trends: e.g. in $Δ$Teff vs. $Δ$log g for the APOGEE-GES stars, and a clear correlation in the vmicro-$Δ$vmicro planes in the APOGEE-GALAH common sample. For [$α$/H], [Ti/H] (APOGEE-GALAH giants) and [Al/H] (APOGEE-GALAH dwarfs) potential strong correlations are discovered as a function of the differences in the main atmospheric parameters, and we find weak trends for other elements. In general we find good agreement between the three surveys within their respective uncertainties. However, there are certain regimes in which strong variants exist, which we discuss. There are still offsets larger than 0.1 dex in the absolute abundance scales.
description: Accepted in A&A, 23 pages, 13 figures, 6 tables. A minor correction is applied to the Gaia-ESO Survey's solar reference: Grevesse et al. (2007) instead of Grevesse & Sauval (1998)
Nachhaltige Forschungssoftware und Forschungsdaten im Kulturbereich
Creators: name: Jettka, Daniel
name: Ferger, Anne
Publisher: name: Zenodo
Year: 2023
Subjects: Digital Humanities
NFDI4Culture

description: Hier sind die Präsentationsfolien zu dem Vortrag "Nachhaltige Forschungssoftware und Forschungsdaten im Kulturbereich – Perspektiven aus NFDI4Culture" veröffentlicht, der am 17. April 2023 im Rahmen der Ringvorlesung "Digital Humanities im Fokus: Methoden, Anwendungen und Perspektiven" an der Universität Rostock gehalten wurde. Abstract: Die Nachhaltigkeit von Forschungssoftware und Forschungsdaten spielt eine große Rolle für den wissenschaftlichen Erkenntnisprozess. Die Orientierung an Kriterien wie Auffindbarkeit, Zugänglichkeit, Interoperabilität und Wiederverwendbarkeit stellt konkrete Ansprüche an die Erhebung und Implementierung sowie das Management und die Publikation von in der Forschung verwendeten Softwarelösungen und Daten. Im Vortrag werden verschiedene Kriterien für Nachhaltigkeit von Forschungssoftware und Forschungsdaten und ihre praktische, teils mit besonderen Herausforderungen und Problemen verbundene Umsetzung vorgestellt und diskutiert. Hierbei wird auf die nationale Forschungsdateninfrastruktur (NFDI) und insbesondere NFDI4Culture – das Konsortium für Forschungsdaten materieller und immaterieller Kulturgüter – Bezug genommen und darauf hingewiesen, wie die bereitgestellten Angebote genutzt werden können. Bios: Daniel Jettka ist wissenschaftlicher Mitarbeiter an der Universität Paderborn und arbeitet derzeit hauptsächlich an Methoden zur nachhaltigen Softwareentwicklung und Forschungsinfrastrukturimplementierung im NFDI4Culture-Konsortium. Von 2012 bis 2021 arbeitete er in verschiedenen Forschungsprojekten des Hamburger Zentrums für Sprachkorpora (HZSK) an der Universität Hamburg, u. a. zu Repository Management, Schnittstellen für gesprochene Sprachkorpora und digitaler Infrastruktur für die Dokumentation gefährdeter Sprachen.

 Anne Ferger ist wissenschaftliche Mitarbeiterin an der Universität Paderborn und der Universität Duisburg-Essen und beschäftigt sich derzeit hauptsächlich mit nachhaltiger Softwareentwicklung und -qualität im Rahmen von NFDI4Culture sowie der Nachnutzung von Daten aus multimodalen Korpora. Nach ihrem Bachelor- und Masterstudium der Linguistik an der Universität Göttingen und der Universität Hamburg arbeitete sie von 2016 bis 2021 am Hamburger Zentrum für Sprachkorpora (HZSK) und im Akademienprojekt INEL an der Universität Hamburg.
description: NFDI4Culture wird gefördert durch die Deutsche Forschungsgemeinschaft (DFG) – 441958017.
Versatile volumetric additive manufacturing with 3D ray tracing
Creators: name: Webber, Daniel
name: Zhang, Yujie
name: Picard, Michel
name: Boisvert, Jonathan
name: Paquet, Chantal
name: Orth, Antony
Publisher: name: arXiv
Year: 2022
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Tomographic volumetric additive manufacturing (VAM) is an optical 3D printing technique where an object is formed by photopolymerizing resin via tomographic projections. Currently, these projections are calculated using the Radon transform from computed tomography but it ignores two fundamental properties of real optical projection systems: finite etendue and non-telecentricity. In this work, we introduce 3D ray tracing as a new method of computing projections in tomographic VAM and demonstrate high fidelity printing in non-telecentric and higher etendue systems, leading to a 3X increase in vertical build volume than the standard Radon method. The method introduced here expands the possible tomographic VAM printing configurations, enabling faster, cheaper, and higher fidelity printing.
description: 16 pages, 8 figures
Temporal Rainbow Scattering at Boundary-Induced Time Interfaces
Creators: name: Stefanini, L.
name: Ramaccia, D.
name: Toscano, A.
name: Bilotti, F.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Since the dawn of modern optics and electromagnetics, optical prism is one of the most fascinating optical elements for refracting light. Exploiting its frequency dispersive behaviour, a prism is able to refract different frequencies in different directions, realizing polychromatic light rainbows. Recently, thanks to their engineerable electromagnetic response, metamaterials have been exploited for achieving novel refractive scattering processes, going beyond the classical prism effects. In this Manuscript, we report on a novel rainbow-like scattering process taking place at the interface of a boundary-induced temporal metamaterial realized by instantaneously opening the boundary conditions of a parallel plate waveguide. Changing abruptly the conductivity of one of the two metallic plates, we demonstrate that an equivalent temporal interface between two different media is realized, and the monochromatic wave propagating into the waveguide gets scattered into a polychromatic rainbow in free-space. We derive the relationships between the waveguide mode and the raising rainbow in terms of scattered amplitude and frequencies as a function of the elevation angle with respect to the waveguide axis. We apply the underlying physics to control the temporal rainbow by imposing a principal direction of scattering by design. Full-wave numerical simulations are performed for computing the rainbow temporal scattering and verifying the design guidelines for achieving controlled temporal rainbow scattering.
description: 14 pages, 3 figures, Appendix
Deviations to $μ-τ$ symmetry in a cobimaximal scenario
Creators: name: Rivera-Agudelo, Diana C.
name: Tostado, S. L.
Publisher: name: arXiv
Year: 2022
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Within the different patterns of the neutrino mixing matrix, the cobimaximal mixing remains a plausible possibility for understanding the flavor structure of neutrinos as it is consistent with current experimental data. Such a pattern is related to a concrete form of the mass matrix, displaying a $μ-τ$ reflection symmetry, which has motivated many theoretical investigations in recent years. In this paper, we discuss the effects of the Majorana phases over a $μ-τ$ symmetric mass matrix obtained from a cobimaximal mixing matrix. We investigate how these phases could be restricted through deviations from the symmetric scenario and the most precise determinations of the mixing parameters. Some of our relations could be tested with future results.
description: 9 pages, 2 figures. Version accepted for publication in NPB
Langevin and Hamiltonian based Sequential MCMC for Efficient Bayesian Filtering in High-dimensional Spaces
Creators: name: Septier, Francois
name: Peters, Gareth W.
Publisher: name: arXiv
Year: 2015
Subjects: subject: Computation (stat.CO)
subject: Applications (stat.AP)
subject: FOS: Computer and information sciences

description: Nonlinear non-Gaussian state-space models arise in numerous applications in statistics and signal processing. In this context, one of the most successful and popular approximation techniques is the Sequential Monte Carlo (SMC) algorithm, also known as particle filtering. Nevertheless, this method tends to be inefficient when applied to high dimensional problems. In this paper, we focus on another class of sequential inference methods, namely the Sequential Markov Chain Monte Carlo (SMCMC) techniques, which represent a promising alternative to SMC methods. After providing a unifying framework for the class of SMCMC approaches, we propose novel efficient strategies based on the principle of Langevin diffusion and Hamiltonian dynamics in order to cope with the increasing number of high-dimensional applications. Simulation results show that the proposed algorithms achieve significantly better performance compared to existing algorithms.
Gravitational lensing in a topologically charged Eddington-inspired Born-Infeld spacetime
Creators: name: Soares, A. R.
name: Vitória, R. L. L.
name: Pereira, C. F. S.
Publisher: name: arXiv
Year: 2023
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: In the present paper, we study several aspects of gravitational lensing caused by a topologically charged Monopole/Wormhole, both in the weak field limit and in the strong field limit. We calculate the light deflection and then use it to determine the observables, with which one can investigate the existence of these objects through observational tools. We emphasize that the presence of the topological charge produces changes in the observables in relation to the case of General Relativity Ellis-Bronnikov wormhole.
Additional file 5: of A systematic review and meta-analysis of the effectiveness of food safety education interventions for consumers in developed countries
Creators: name: Young, Ian
name: Waddell, Lisa
name: Harding, Shannon
name: Greig, Judy
name: Mascarenhas, Mariola
name: Bhairavi Sivaramalingam
name: Pham, Mai
name: Papadopoulos, Andrew
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: List of studies with more than two intervention and control groups. (DOCX 25Â kb)
Additional file 4: Figure S4. of Genome-wide mosaicism within Mycobacterium abscessus: evolutionary and epidemiological implications
Creators: name: Sapriel, Guillaume
name: Konjek, Julie
name: Orgeur, Mickael
name: Bouri, Laurent
name: FrĂŠzal, Lise
name: Anne-Laure Roux
name: Dumas, Emilie
name: Brosch, Roland
name: Bouchier, Christiane
name: Brisse, Sylvain
name: Vandenbogaert, Mathias
name: Jean-Michel Thiberge
name: ValĂŠrie Caro
name: Ngeow, Yun
name: Tan, Joon
name: Jean-Louis Herrmann
name: Jean-Louis Gaillard
name: Heym, Beate
name: Wirth, Thierry
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Biotechnology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: A. Mstree representing the isolates characterization based on rpoB typing. B. Rates of false identification according to rpoB sequencing. Colored histograms correspond to assignments confirmed by the Bayesian algorithm (MLST based), whereas black fractions correspond to conflicting identifications (failure rate). (PDF 184Â kb)
Open Access – Ein Vorschlag zur Klassifikation und Operationalisierung
Creators: name: Hobert, Anne
name: Taubert, Niels
Publisher: name: Kolloquium Wissensinfrastruktur
Year: 2019

description: Der Begriff Open Access bezeichnet nicht nur eine bestimmte Art des wissenschaftlichen Publizierens – nämlich den leserseitig kostenlosen, freien Zugang zu Forschungsergebnissen in einem digitalen Format – sondern impliziert auch, dass dieser erstrebenswert ist. Zusammen mit der großen Vielfalt von Open-Access-Typen erschwert der normative Gehalt des Begriffs die Verständigung über wissenschaftliches Publizieren und freie Zugänglichkeit sowie die empirische Beforschung des Phänomens. Ziel des Beitrags ist es, ein nicht-normatives Verständnis von Open Access zu entwickeln, das sich für empirische Studien im Bereich der Bibliometrie und Wissenschaftsforschung eignet. Dies erfolgt in drei Schritten: Erstens werden die normativen Gehalte des Begriffs expliziert und von den deskriptiven Begriffsbestandteilen getrennt. Daran anschließend findet zweitens eine Durchsicht der Dimensionen statt, die der Unterscheidung verschiedener Typen von Open Access zugrundeliegen. Basierend darauf wird ein Klassifikationsschema entwickelt, das in den einzelnen Dimensionen vollständig ist und zu abgrenzungsstarken Open-Access-Klassen führt. Der empirische Nutzen einer solchen Klassifikation hängt nicht nur von der Stringenz der konzeptionellen Überlegungen ab, sondern auch von der Operationalisierbarkeit der Klassen. Daher wird drittens illustriert, welche offenen Datenquellen für einen Nachweis der verschiedenen Klassen genutzt werden können. Um den Nutzen von Klassifikation und Operationalisierung zu illustrieren, schließt der Beitrag mit einem Ausblick auf das Projekt OAUNI, mit dem Open-Access-Profile für sämtliche Universitäten in Deutschland erstellt und Determinanten zur Erklärung von Unterschieden in den Profilen empirisch getestet werden sollen. Der Beitrag geht zurück auf eine Präsentation während der Open-Access-Tage 2019 und den Preprint Taubert, Niels, et al. "Open Access--Towards a non-normative and systematic understanding." arXiv preprint arXiv:1910.11568 (2019).
description: Kolloquium Wissensinfrastruktur, Wintersemester 2019/2020
Non-adiabatic Ring Polymer Molecular Dynamics in the Phase Space of the SU(N) Lie Group
Creators: name: Bossion, Duncan
name: Chowdhury, Sutirtha N.
name: Huo, Pengfei
Publisher: name: arXiv
Year: 2022
Subjects: subject: Chemical Physics (physics.chem-ph)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We derive the non-adiabatic ring polymer molecular dynamics (RPMD) approach in the phase space of the SU(N) Lie Group. This method, which we refer to as the spin mapping non-adiabatic RPMD (SM-NRPMD), is based on the spin-mapping formalism for the electronic degrees of freedom (DOFs) and ring polymer path-integral description for the nuclear DOFs. Using the Stratonovich-Weyl transform for the electronic DOFs, and the Wigner transform for the nuclear DOFs, we derived an exact expression of the Kubo-transformed time-correlation function (TCF). We further derive the spin mapping non-adiabatic Matsubara dynamics using the Matsubara approximation that removes the high frequency nuclear normal modes in the TCF and derive the SM-NRPMD approach from the non-adiabatic Matsubara dynamics by discarding the imaginary part of the Liouvillian. The SM-NRPMD method has numerical advantages compared to the original NRPMD method based on the MMST mapping formalism, due to a more natural mapping using the SU(N) Lie Group that preserves the symmetry of the original system. We numerically compute the Kubo-transformed position auto-correlation function and electronic population correlation function for three-state model systems. The numerical results demonstrate the accuracy of the SM-NRPMD method, which outperforms the original MMST-based NRPMD. We envision that the SM-NRPMD method will be a powerful approach to simulate electronic non-adiabatic dynamics and nuclear quantum effects accurately.
All-order celestial OPE from on-shell recursion
Creators: name: Ren, Lecheng
name: Schreiber, Anders
name: Sharma, Atul
name: Wang, Diandian
Publisher: name: arXiv
Year: 2023
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We determine tree level, all-order celestial operator product expansions (OPEs) of gluons and gravitons in the maximally helicity violating (MHV) sector. We start by obtaining the all-order collinear expansions of MHV amplitudes using the inverse soft recursion relations that they satisfy. These collinear expansions are recast as celestial OPE expansions in bases of momentum as well as boost eigenstates. This shows that inverse soft recursion for MHV amplitudes is dual to OPE recursion in celestial conformal field theory.
description: 26 pages, no figures; v2: matches published version
On the fundamental groups of normal varieties
Creators: name: Arapura, Donu
name: Dimca, Alexandru
name: Hain, Richard
Publisher: name: arXiv
Year: 2014
Subjects: subject: Algebraic Geometry (math.AG)
subject: Algebraic Topology (math.AT)
subject: FOS: Mathematics

description: We show that the fundamental groups of normal complex algebraic varieties share many properties of the fundamental groups of smooth varieties. The jump loci of rank one local systems on a normal variety are related to the jump loci of a resolution and of a smoothing of this variety.
description: version 2: Thanks to references communicated by J\'anos Koll\'ar, one proof became unnecessary and is removed. On the other hand, Theorem 1.1 has a stronger form in this version
РОЛЬ ГЛАГОЛОВ В ПЕРЕДАЧЕ ЭМОЦИОНАЛЬНЫХ СОСТОЯНИЙ И ХАРАКТЕРИСТИКЕ ПЕРСОНАЖЕЙ
Creators: name: Болтаева, Дилноза
Publisher: name: Zenodo
Year: 2025

description: В статье рассматривается значимость глаголов в художественном тексте как ключевого средства выражения эмоционального фона и психологической характеристики персонажей. На примере лингвистических и стилистических исследований показано, что грамматические формы и лексико-семантические особенности глагола формируют эмоциональный рисунок повествования и выявляют индивидуальные черты героев.
Non-relativistic string monodromies
Creators: name: Fontanella, Andrea
name: García, Juan Miguel Nieto
name: Sax, Olof Ohlsson
Publisher: name: arXiv
Year: 2022
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Spectral curve methods proved to be powerful techniques in the context of relativistic integrable string theories, since they allow to derive the semiclassical spectrum from the minimal knowledge of a Lax pair and a classical string solution. In this paper we initiate the study of the spectral curve for non-relativistic strings in AdS$_5\times S^5$. First we show that for string solutions whose Lax connection is independent of $σ$, the eigenvalues of the monodromy matrix do not have any spectral parameter dependence. We remark that this particular behaviour also appears for relativistic strings in flat space. Second, for some simple non-relativistic string solutions where the path ordered exponential of the Lax connection can be computed, we show that the monodromy matrix is either diagonalisable with quasi-momenta independent of the spectral parameter, or non-diagonalisable. For the latter case, we propose a notion of generalised quasi-momenta, based on maximal abelian subalgebras, which retain a dependence on the spectral parameter.
description: 20 pages
Additional file 1: Figure S1. of Genome-wide mosaicism within Mycobacterium abscessus: evolutionary and epidemiological implications
Creators: name: Sapriel, Guillaume
name: Konjek, Julie
name: Orgeur, Mickael
name: Bouri, Laurent
name: FrĂŠzal, Lise
name: Anne-Laure Roux
name: Dumas, Emilie
name: Brosch, Roland
name: Bouchier, Christiane
name: Brisse, Sylvain
name: Vandenbogaert, Mathias
name: Jean-Michel Thiberge
name: ValĂŠrie Caro
name: Ngeow, Yun
name: Tan, Joon
name: Jean-Louis Herrmann
name: Jean-Louis Gaillard
name: Heym, Beate
name: Wirth, Thierry
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Plots of transitions (blue crosses) and transversions (green triangles) versus genetic distance. General time reversible (GTR) genetic distance for the eight concatenated gene fragments is plotted against the percent number of substitutions at all codon positions. S: transitions; V: transversions. No apparent saturation can be detected. (PDF 303Â kb)
Additional file 4: of Toxicity responses of Cu and Cd: the involvement of miRNAs and the transcription factor SPL7
Creators: name: Gielen, Heidi
name: Remans, Tony
name: Vangronsveld, Jaco
name: Cuypers, Ann
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Plant Biology

description: Forward and reverse primers used to determine gene expression levels via quantitative real-time PCR. E-E-jn, exon-exon junction; E-I-b, exon-intron boundary; YLS, yellow-leaf-specific; UBQ10, ubiquitin; ACT, actin ; EF, elongation factor; APS, ATP sulfurylase; SULTR, sulfate transporter; LAC, laccase; CSD, Cu/Zn superoxide dismutase; FSD, Fe superoxide dismutase. *Pri-miRNA primer concentrations were increased to 900 nM. (DOCX 18 kb)
Skyrme crystals with massive pions
Creators: name: Harland, Derek
name: Leask, Paul
name: Speight, Martin
Publisher: name: arXiv
Year: 2023
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The crystalline structure of nuclear matter is investigated in the standard Skyrme model with massive pions. A semi-analytic method is developed to determine local minima of the static energy functional with respect to variations of both the field and the period lattice of the crystal. Four distinct Skyrme crystals are found. Two of these were already known -- the cubic lattice of half-skyrmions and the $α$-particle crystal -- but two are new. These new solutions have lower energy per baryon number and less symmetry, being periodic with respect to trigonal but not cubic period lattices. Minimal energy crystals are also constructed under the constraint of constant baryon density, and its shown that the two new non-cubic crystals tend to chain and multi-wall solutions at low densities.
description: 24 pages, 4 figures
Cloudbasiertes Bibliothekssystem
Creators: name: Knorn, Barbara
name: Pieper, Dirk
Publisher: name: Kolloquium Wissensinfrastruktur
Year: 2019

description: „Mit der Einführung einer neuen landesweiten Bibliothekssoftware reagieren die Hochschulen in Nordrhein-Westfalen auf die Anforderungen der Digitalisierung – und demonstrieren, dass sie diese Herausforderungen gemeinsam lösen“, sagte Kultur- und Wissenschaftsministerin Isabel Pfeiffer-Poensgen. „Die neue Cloud-Lösung für die Hochschulbibliotheken leistet einen wesentlichen Beitrag zur Weiterentwicklung wissenschaftlicher Informationsstrukturen – und ist damit auch ein Meilenstein für die Digitale Hochschule NRW.“ Die Universitätsbibliothek Bielefeld wird mit fünf weiteren Hochschulbibliotheken (Aachen, Dortmund, Düsseldorf, Duisburg-Essen und Wuppertal) in einer Pilotgruppe sein, die die Cloud-Lösung als erste einsetzt. Bis 2023 sollen rund 40 Hochschulbibliotheken sowie die Zentrale Fachbibliothek für die Lebenswissenschaften (ZB MED) sukzessive auf das neue System umgestellt werden. Der Vortrag wird den aktuellen Stand zum cloudbasierten Bibliotheksmanagementsystem vorstellen.
description: Kolloquium Wissensinfrastruktur, Wintersemester 2019/2020
BREAKING BAD NEWS PROTOCOLS IN HEALTHCARE: A SCOPING REVIEW PROTOCOL
Creators: name: Cardoso, Ana Filipa dos Reis Marques
Publisher: name: figshare
Year: 2023
Subjects: classificationCode: 429999
subject: Other health sciences not elsewhere classified

description: This project is a scoping review that intend to map the evidence on the existing communication protocols that has been implemented for breaking bad news with adults in healthcare.
Additional file 1: of Effectiveness and safety of traditional Chinese medicine in treating acquired immune deficiency syndrome: 2004â  2014
Creators: name: Liu, Zhi-Bin
name: Yang, Ji-Ping
name: Li-Ran Xu
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Multilingual abstracts in the six official working languages of the United Nations. (PDF 228 kb)
Ultraproducts of continuous posets
Creators: name: Andréka, H.
name: Gyenis, Z.
name: Németi, I.
Publisher: name: arXiv
Year: 2015
Subjects: subject: Logic (math.LO)
subject: FOS: Mathematics
subject: 06A06, 03C20, 06E25, 06B35

description: It is known that nontrivial ultraproducts of complete partially ordered sets (posets) are almost never complete. We show that complete additivity of functions is preserved in ultraproducts of posets. Since failure of this property is clearly preserved by ultraproducts, this implies that complete additivity of functions is an elementary property.
Percolation in two-species antagonistic random sequential adsorption in two dimensions
Creators: name: Martins, Paulo H. L.
name: Dickman, Ronald
name: Ziff, Robert M.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We consider two-species random sequential adsorption (RSA) in which species A and B adsorb randomly on a lattice with the restriction that opposite species cannot occupy nearest-neighbor sites. When the probability $x_A$ of choosing an A particle for an adsorption trial reaches a critical value $0.626441(1)$, the A species percolates and/or the blocked sites X (those with at least one A and one B nearest neighbor) percolate. Analysis of the size-distribution exponent $τ$, the wrapping probabilities, and the excess cluster number shows that the percolation transition is consistent with that of ordinary percolation. We obtain an exact result for the low $x_B = 1 - x_A$ jamming behavior: $θ_A = 1 - x_B +b_2 x_B^2+\mathcal{O}(x_B^3)$, $θ_B = x_B/(z+1)+\mathcal{O}(x_B^2)$ for a $z$-coordinated lattice, where $θ_A$ and $θ_B$ are respectively the saturation coverages of species A and B. We also show how differences between wrapping probabilities of A and X clusters, as well as differences in the number of A and X clusters, can be used to find the transition point accurately. For the one-dimensional case a three-site approximation appears to provide exact results for the coverages.
Large Interferometer For Exoplanets (LIFE): VIII. Where is the phosphine? Observing exoplanetary PH3 with a space based MIR nulling interferometer
Creators: name: Angerhausen, D.
name: Ottiger, M.
name: Dannert, F.
name: Miguel, Y.
name: Sousa-Silva, C.
name: Kammerer, J.
name: Menti, F.
name: Alei, E.
name: Konrad, B. S.
name: Wang, H. S.
name: Quanz, S. P.
name: collaboration, the LIFE
Publisher: name: arXiv
Year: 2022
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Physical sciences

description: Phosphine could be a key molecule in the understanding of exotic chemistry happening in (exo)planetary atmospheres. While it has been detected in the Solar System's giant planets, it has not been observed in exoplanets yet. In the exoplanetary context however it has been theorized as a potential biosignature molecule. The goal of our study is to identify which illustrative science cases for PH3 chemistry are observable with a space-based mid-infrared nulling interferometric observatory like the LIFE (Large Interferometer For Exoplanets) concept. We identified a representative set of scenarios for PH3 detections in exoplanetary atmospheres varying over the whole dynamic range of the LIFE mission. We used chemical kinetics and radiative transfer calculations to produce forward models of these informative, prototypical observational cases for LIFEsim, our observation simulator software for LIFE. In a detailed, yet first order approximation it takes a mission like LIFE: (i) about 1h to find phosphine in a warm giant around a G star at 10 pc, (ii) about 10 h in H2 or CO2 dominated temperate super-Earths around M star hosts at 5 pc, (iii) and even in 100h it seems very unlikely that phosphine would be detectable in a Venus-Twin with extreme PH3 concentrations at 5 pc. Phosphine in concentrations previously discussed in the literature is detectable in 2 out of the 3 cases and about an order of magnitude faster than comparable cases with JWST. We show that there is a significant number of objects accessible for these classes of observations. These results will be used to prioritize the parameter range for the next steps with more detailed retrieval simulations. They will also inform timely questions in the early design phase of a mission like LIFE and guide the community by providing easy-to-scale first estimates for a large part of detection space of such a mission.
description: In press. Accepted for publication in Astrobiology on 02 November 2022. 26 pages, 5 figures and 8 tables
Infrared Renormalons in Supersymmetric Theories
Creators: name: Shifman, Mikhail
Publisher: name: arXiv
Year: 2022
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: I argue that in large-$N$ supersymmetric QCD infrared renormalons are absent in the conformal window, there is no need in conspiracy, and vacuum expectation values of at least some gluon operators vanish. Basing on this conclusion I conjecture that in supersymmetric gluodynamics (supersymmetric Yang-Mills theory without matter) at least the leading renormalon ambiguity disappears which would be consistent with the fact that the gluon condensate vanishes in this theory, $\langle G_{μν}^a G^{μν\,a}\rangle =0$.
description: 16 pages, 4 figures
Analysis of events with $b$-jets and a pair of leptons of the same charge in $pp$ collisions at $\sqrt{s}=8$ TeV with the ATLAS detector
Creators: name: ATLAS Collaboration
Publisher: name: arXiv
Year: 2015
Subjects: subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: An analysis is presented of events containing jets including at least one $b$-tagged jet, sizeable missing transverse momentum, and at least two leptons including a pair of the same electric charge, with the scalar sum of the jet and lepton transverse momenta being large. A data sample with an integrated luminosity of 20.3 fb$^{-1}$ of $pp$ collisions at $\sqrt{s} = 8$ TeV recorded by the ATLAS detector at the Large Hadron Collider is used. Standard Model processes rarely produce these final states, but there are several models of physics beyond the Standard Model that predict an enhanced rate of production of such events; the ones considered here are production of vector-like quarks, enhanced four-top-quark production, pair production of chiral $b^\prime$-quarks, and production of two positively charged top quarks. Eleven signal regions are defined; subsets of these regions are combined when searching for each class of models. In the three signal regions primarily sensitive to positively charged top quark pair production, the data yield is consistent with the background expectation. There are more data events than expected from background in the set of eight signal regions defined for searching for vector-like quarks and chiral $b^\prime$-quarks, but the significance of the discrepancy is less than two standard deviations. The discrepancy reaches 2.5 standard deviations in the set of five signal regions defined for searching for four-top-quark production. The results are used to set 95% CL limits on various models.
description: 36 pages plus author list plus cover pages (59 pages total), 12 figures, 12 tables, published on JHEP 10 (2015) 150. All figures including auxiliary figures are available at https://atlas.web.cern.ch/Atlas/GROUPS/PHYSICS/PAPERS/EXOT-2013-16/
Magnetospheric Multiscale Observations of Markov Turbulence on Kinetic Scales
Creators: name: Macek, Wieslaw M.
name: Wojcik, Dariusz
name: Burch, James L.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Plasma Physics (physics.plasm-ph)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Space Physics (physics.space-ph)
subject: FOS: Physical sciences

description: In our previous studies we have examined solar wind and magnetospheric plasmas turbulence, including Markovian character on large inertial magneto-hydrodynamic scales. Here we present the results of statistical analysis of magnetic field fluctuations in the Earth's magnetosheath based on Magnetospheric Multiscale mission at much smaller kinetic scales. Following our results on spectral analysis with very large slopes of about -16/3, we apply Markov processes approach to turbulence in this kinetic regime. It is shown that the Chapman-Kolmogorov equation is satisfied and the lowest-order Kramers-Moyal coefficients describing drift and diffusion with a power-law dependence are consistent with a generalized Ornstein-Uhlenbeck process. The solutions of the Fokker-Planck equation agree with experimental probability density functions, which exhibit a universal global scale invariance through the kinetic domain. In particular, for moderate scales we have the kappa distribution described by various peaked shapes with heavy tails, which with large values of kappa parameter are reduced to the Gaussian distribution for large inertial scales. This shows that the turbulence cascade can be described by the Markov processes also on very small scales. The obtained results on kinetic scales may be useful for better understanding of the physical mechanisms governing turbulence
description: accepted to Astrophys. J. 2 November 2022, 17 pages, 7 figures
Zero sound in a quantum gas of spin-3/2 atoms with multipole exchange interaction
Creators: name: Bulakhov, M.
name: Peletminskii, A. S.
name: Slyusarenko, Yu. V.
Publisher: name: arXiv
Year: 2023
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: FOS: Physical sciences

description: In the context of quantum gases, we obtain a many-body Hamiltonian for spin-3/2 atoms with general multipole (spin, quadrupole, and octupole) exchange interaction by employing the apparatus of irreducible spherical tensor operators. This Hamiltonian implies the finite-range interaction, whereas, for zero-range (contact) potentials parameterized by the $s$-wave scattering length, the multipole exchange interaction becomes irrelevant. Following the reduced description method for quantum systems, we derive the quantum kinetic equation for spin-3/2 atoms in a magnetic field and apply it to examine the high-frequency oscillations known as zero sound.
description: 21 pages, 2 figures
MOESM6 of Genome-wide analysis of overlapping genes regulated by iron deficiency and phosphate starvation reveals new interactions in Arabidopsis roots
Creators: name: Wenfeng Li
name: Lan, Ping
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Additional file 6. Subset of 210 overlapping genes consists of the largest co-expression module. The fold change of the gene expression was indicated as mean with standard deviation (SD).
Additional file 3: Table S3. of Mammographic density and breast cancer risk: a mediation analysis
Creators: name: Rice, Megan
name: Bertrand, Kimberly
name: VanderWeele, Tyler
name: Rosner, Bernard
name: Xiaomei Liao
name: Hans-Olov Adami
name: Rulla Tamimi
Publisher: name: Figshare
Year: 2016
Subjects: subject: Molecular Biology
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Plant Biology

description: Mediation analysis in women premenopausal at mammogram, modeling interaction between the exposure and percent MD (NHS/NHS2). (DOC 108 kb)
Integrated O- and C-band Silicon-Lithium Niobate Mach-Zehnder Modulators with 100 GHz Bandwidth, Low Voltage, and Low Loss
Creators: name: Valdez, Forrest
name: Mere, Viphretuo
name: Wang, Xiaoxi
name: Mookherjea, Shayan
Publisher: name: arXiv
Year: 2022
Subjects: subject: Optics (physics.optics)
subject: Applied Physics (physics.app-ph)
subject: FOS: Physical sciences

description: Broadband integrated thin-film lithium niobate (TFLN) electro-optic modulators (EOM) are desirable for optical communications and signal processing in both the O-band (1310 nm) and C-band (1550 nm). To address these needs, we design and demonstrate Mach-Zehnder (MZ) EOM devices in a hybrid platform based on TFLN bonded to foundry-fabricated silicon photonic waveguides. Using a single silicon lithography step and a single bonding step, we realize MZ EOM devices which cover both wavelength ranges on the same chip. The EOM devices achieve 100 GHz EO bandwidth (referenced to 1 GHz) and about 2-3 V$.$cm figure-of-merit ($V_πL$) with low on-chip optical loss in both the O-band and C-band.
description: 21 pages, 11 figures
Additional file 3: Table S3. of Pleistocene sea level fluctuation and host plant habitat requirement influenced the historical phylogeography of the invasive species Amphiareus obscuriceps (Hemiptera: Anthocoridae) in its native range
Creators: name: Danli Zhang
name: Ye, Zhen
name: Yamada, Kazutaka
name: Yahui Zhen
name: Chenguang Zheng
name: Wenjun Bu
Publisher: name: Figshare
Year: 2016
Subjects: subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified

description: Discovery of Amphiareus obscuriceps in different countries and related reference. (DOC 44Â kb)