cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
title: Variability in community productivity: mediation by vegetation traits
Creators: name: Polley, H.
name: Wilsey, Brian
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: Diversity, Functional trait, Grassland, Spatial scale, Specific leaf area
subject: 004
subject: 570
subject: 580
subject: 590
subject: 600
subject: 630

description: Plant productivity varies through time in response to environmental fluctuations. Learning to reduce temporal variability in primary productivity is a frequent goal of management with clear relevance to sustaining ecosystem services for an expanding human population. Reducing variability in productivity requires an improved understanding of how plant community traits interact with environmental fluctuations to influence plant growth dynamics. We evaluated links between two community traits, species diversity and species abundance-weighted values of specific leaf area (SLA; leaf area per unit of leaf dry weight), and temporal variability in grassland productivity at patch (local) and aggregate (multi-patch) spatial scales. Aggregate communities were created by combining patches of spatially-distinct communities of perennial plant species from grassland biodiversity experiments in Texas, USA. Inter-annual variability in aboveground net primary productivity (ANPP) of aggregate communities was analyzed as a function of two multiplicative components, mean temporal variability in the ANPP of patches and temporal synchrony in ANPP dynamics among patches. We used regression analyses to determine whether temporal variability in aggregate ANPP and its components were correlated with either species diversity or community-weighted SLA over 5 years. We found that temporal variability in ANPP of aggregate communities, calculated as the square of the temporal CV [(δ/μ)2] of ANPP, was strongly correlated with temporal variability in patch ANPP. Increasing mean SLA reduced ANPP variability of aggregate communities by increasing mean productivity (μ). Increased temporal changes in patch-scale SLA further reduced temporal variability in aggregate ANPP by reducing effects of precipitation fluctuations on productivity. Conversely, increasing species diversity over the narrow range measured increased temporal variability in aggregate ANPP. High diversity was associated with reduced dominance of temporally-stable C4 grasses. Our results implicate means and patch-scale temporal dynamics in community SLA as potential indicators of variability in grassland primary productivity through time.
description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World
Two-dome structure in electron-doped iron arsenide superconductors
Creators: name: Iimura, Soshi
name: Matuishi, Satoru
name: Sato, Hikaru
name: Hanna, Taku
name: Muraba, Yoshinori
name: Kim, Sung Wng
name: Kim, Jung Eun
name: Takata, Masaki
name: Hosono, Hideo
Publisher: name: arXiv
Year: 2012
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: Iron arsenide superconductors based on the material LaFeAsO1-xFx are characterized by a two-dimensional Fermi surface (FS) consisting of hole and electron pockets yielding structural and antiferromagnetic transitions at x = 0. Electron doping by substituting O2- with F- suppresses these transitions and gives rise to superconductivity with a maximum Tc = 26 K at x = 0.1. However, the over-doped region cannot be accessed due to the poor solubility of F- above x = 0.2. Here we overcome this problem by doping LaFeAsO with hydrogen. We report the phase diagram of LaFeAsO1-xHx (x < 0.53) and, in addition to the conventional superconducting dome seen in LaFeAsO1-xFx, we find a second dome in the range 0.21 < x < 0.53, with a maximum Tc of 36 K at x = 0.3. Density functional theory calculations reveal that the three Fe 3d bands (xy, yz, zx) become degenerate at x = 0.36, whereas the FS nesting is weakened monotonically with x. These results imply that the band degeneracy has an important role to induce high Tc.
description: 31 pages, 4 figures, 1 table and supplementary information
The Force-Free Electrodynamics Method for the Extrapolation of Coronal Magnetic Fields from Vector Magnetograms
Creators: name: Contopoulos, Ioannis
Publisher: name: arXiv
Year: 2012
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: We present a new improved version of our force-free electrodynamics (FFE) numerical code in spherical coordinates that extrapolates the magnetic field in the inner solar corona from a photospheric vector magnetogram. The code satisfies the photospheric boundary condition and the condition divB=0 to machine accuracy. The performance of our method is evaluated with standard convergence parameters, and is found to be comparable to that of other nonlinear force-free extrapolations.
description: 9 pages, 1 figure, accepted for publication in Solar Physics
MPEC 2023-G80 : 2023 GJ1
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2023
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469
subject: 2023 GJ1

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
Additional file 1 of The impact of robotic intervention on joint attention in children with autism spectrum disorders
Creators: name: Kumazaki, Hirokazu
name: Yoshikawa, Yuichiro
name: Yoshimura, Yuko
name: Ikeda, Takashi
name: Hasegawa, Chiaki
name: Saito, Daisuke N.
name: Tomiyama, Sara
name: An, Kyung-min
name: Shimaya, Jiro
name: Ishiguro, Hiroshi
name: Matsumoto, Yoshio
name: Minabe, Yoshio
name: Kikuchi, Mitsuru
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Neuroscience
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases

description: The following scripts are example of the scripts. Each session lasted approximately 5 min. (DOCX 18 kb)
Additional file 1: of The impact of robotic intervention on joint attention in children with autism spectrum disorders
Creators: name: Kumazaki, Hirokazu
name: Yoshikawa, Yuichiro
name: Yoshimura, Yuko
name: Ikeda, Takashi
name: Hasegawa, Chiaki
name: Saito, Daisuke
name: Tomiyama, Sara
name: An, Kyung-min
name: Shimaya, Jiro
name: Ishiguro, Hiroshi
name: Matsumoto, Yoshio
name: Minabe, Yoshio
name: Kikuchi, Mitsuru
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Biotechnology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: The following scripts are example of the scripts. Each session lasted approximately 5Â min. (DOCX 18Â kb)
title: Inconstant exponents of scaling leaf nitrogen to phosphorus
Creators: name: Tian, Di
name: Yan, Zhengbing
name: Fang, Jingyun
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: Nitrogen, phosphorus, scaling exponent, functional group, latitudinal pattern, leaf
subject: 004
subject: 570
subject: 580
subject: 590
subject: 600
subject: 630

description: Nitrogen (N) and phosphorus (P), especially the N in Rubisco that drives photosynthesis and the P in rRNA that drives the generation and maintenance of proteins, are essential nutrients for plants. As an important plant leaf trait and allometric “rule” in ecology, the scaling relationship between leaf N and P concentrations is crucial to modelling N and P cycles in terrestrial ecosystems. Previous studies have generalized an invariably “constant” law that N scales roughly as the 2/3 or 3/4 power of P (i.e., N∝Pα=2/3 or 3/4). However, whether the numerical value of the scaling exponent is constant remains unclear and is one of key issues in plant ecology. To address how the numerical value of the scaling exponent changes with functional groups and environmental conditions, we compiled a global data set and found that the exponent varied significantly across different functional groups, latitudinal zones, ecoregions (continents), and sites. The exponents of herbaceous and woody plants were 0.659 and 0.705, respectively. Among woody plants, the exponents of coniferous, deciduous and evergreen broad-leaved species were 0.610, 0.712 and 0.731, respectively. The exponents also showed significant latitudinal patterns, decreasing from tropical to temperate to boreal zones. Further, across the ecoregions of North America, Europe, Asia, Oceania, Africa, and South America, the exponents were 0.603, 0.672, 0.712, 0.786, 0.835, and 1.071, respectively. At sites with a sample size >10, the values fluctuated from 0.366 to 1.928, with an average of 0.841. Such large numerical variations of the N vs. P scaling exponents likely reflect species composition, P-related growth rates, relative nutrient availability of soils and a number of other factors. Our results therefore indicated that there is no canonical numerical value for the leaf N vs. P scaling exponent. The traditional analysis of pooled data at global scale for this scaling relationship hides biologically and ecologically significant variation. This finding has a critical bearing on the parameterization of N and P biogeochemical models.
description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World
Cladopsammia echinata Cairns 1984
Creators: name: Cairns, S. D.
Publisher: name: Zenodo
Year: 2004
Subjects: Biodiversity
Taxonomy
Animalia
Cnidaria
Anthozoa
Scleractinia
Dendrophylliidae
Cladopsammia
Cladopsammia echinata

description: Cladopsammia echinata Cairns, 1984 Cladopsammia echinata Cairns, 1984: 26–27, pl. 5, figs. F–G.– Cairns & Zibrowius, 1997: 191, fig. 29d (NT). New records. None. Types. The holotype is deposited at USNM (60518); paratypes are split between USNM and BPBM. Type Locality: 21°48'N 160°09.1'W (Hawaiian Islands), 298–408 m.
description: Published as part of Cairns, S. D., 2004, The Azooxanthellate Scleractinia (Coelenterata: Anthozoa) of Australia, pp. 259-329 in Records of the Australian Museum 56 on pages 313-315
description: {"references": ["Cairns, S. D., 1984. New records of ahermatypic corals (Scleractinia) from the Hawaiian and Line Islands. Occasional Papers of the Bernice Pauahi Bishop Museum 25 (10): 30 pp., including 5 pls.", "Crossland, C., 1952. Madreporaria, Hydrocorallinae, Heliopora and Tubipora. Great Barrier Reef Expedition 1928 - 29 Scientific Reports 6 (3): 85 - 257, 56 pls."]}
MPEC 2023-G81 : 2023 GK1
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2023
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469
subject: 2023 GK1

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
title: LakeBase Semantic Service
Creators: name: Keil, Jan
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: 004
subject: 570
subject: 580
subject: 590
subject: 600
subject: 630

description: We present the features and architecture of the LakeBase Semantic Service. The LakeBase Semantic Service is a web service for the management of semantic annotations and semantic search of ecological research data. It was developed in the scope of the LakeBase project to support the management of long-term research data of German lake ecosystems. The basic workflow using the service consists of the following steps: (a) Suggestion of semantic annotations–represented by concept IRIs–for provided data and metadata, (b) optional adjustment of suggested annotations by the data provider, (c) storing the suggested and adjusted annotations, (d) auto completion of search queries typed by data users, (e) suggestion of semantic annotations for search queries, (f) optional selection of suggested annotations for search queries by the data users, (g) semantic search of annotated data with (optionally annotated) queries. To enable presentation and management of the annotations, the LakeBase Semantic Service further allows outputting stored annotations, to copy annotation, to delete annotation, and to provide descriptions of annotation concepts. There are several sources of concepts for the semantic annotation. We defined a default programming interface for semantic data sources that has to be implemented for each source. These implementations are provided for ontology files, SPARQL endpoints, and other services like the World Register of Marine Species (WoRMS) webservice and the GFBio Terminology Service. Due to this modular architecture, further semantic data sources can be added with only little programming effort. The LakeBase Semantic Service will be used in the IGB Freshwater Research and Environmental Database (FRED). Further, the source code will be freely available to also allow the usage beyond the LakeBase project. KEYWORDS: Semantic Annotation, Semantic Search, Ontology Based Applications ACKNOWLEDGMENTS: This work was funded by DFG in the scope of the LakeBase project within the Scientific Library Services and Information Systems (LIS) program.
description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World
Spin-orbit coupling induced separation and hidden spin textures in spin-1 Bose-Einstein condensates
Creators: name: Song, Shu-Wei
name: Zhang, Yi-Cai
name: Sun, Qing
name: Wang, Hanquan
name: Wen, Lin
name: Ji, A. C.
name: Liu, W. M.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Atomic Physics (physics.atom-ph)
subject: Quantum Gases (cond-mat.quant-gas)
subject: FOS: Physical sciences

description: We analytically and numerically investigate the ground state of the spin-orbit coupled spin-1 Bose-Einstein condensates in an external parabolic potential. When the spin-orbit coupling strength $κ$ is comparable with that of the trapping potential, the density distribution centers of different components of the spinor condensate deviate evidently from the trap center in the plane wave and stripe phases. When $κ\gg1$, the magnitude of this deviation decreases as $κ$ is getting larger and larger. Correspondingly, periphery half-skyrmions textures arise. This deviation can be reflected by the non-uniform magnetic moment in the $z$ direction, $\mathcal{F}_z$. With the manipulation of the external trap, the local magnitude of $\mathcal{F}_z$ can be increased evidently. This kind of increase of $\mathcal{F}_z$ is also observed in the square vortex lattice phase of the condensate.
description: 7pages,8 figures
Begonia marinae Tebbitt
Creators: name: Moonlight, Peter
name: Fuentes, Alfredo F.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Cucurbitales
Begoniaceae
Begonia
Begonia marinae

description: 4.20.Begonia marinae Tebbitt, Novon 23(4): 481, fig. 1 (2015).   – Type: Bolivia, Santa Cruz Department, Prov. Vallegrande, rd. from Pucara to Alto Seco, N & NE facing open slopes in remnant Tucumano forest, 18°44′S, 64°6′W, 2727 m, 12 i 2012, M.C. Tebbitt 724 (holotype USZ, isotype USZ [2]).
 Begonia sp. nov. in M.C. Tebbitt, Begonian 79: 99 (2012). – Begonia sp. nov. in M.C. Tebbitt, Begonian 80: 105 (2013).
 Begonia octopetala auct. non. L’Hér., R.C. Foster, Contr. Gray Herb. 184: 138 (1958).
 Begonia octopetala auct. non. L’Hér., Wasshausen, D.C. et al. in JØrgensen, P.M. et al. (eds), Cat. Bolivia, Monogr. Syst. Bot. Missouri Bot. Gard. 129: 385 (2013).
 Begonia rosiflora auct. non. Hook.f., Wasshausen, D.C. et al. in JØrgensen, P.M. et al. (eds), Cat. Bolivia, Monogr. Syst. Bot. Missouri Bot. Gard. 129: 386 (2013).
 Begonia rubricaulis auct. non. Hook, D.C. Wasshausen et al. in P.M. JØrgensen et al. (eds), Cat. Bolivia, Monogr. Syst. Bot. Missouri Bot. Gard. 129: 386 (2013).
 Distribution. Bolivia and Argentina.
 Identification notes. Begonia marinae is most similar to B. pleiopetala A.DC. Both species are acaulescent, geophytic herbs with orbicular leaf blades with a dentate margin. Begonia marinae is best distinguished by its paired bracteoles (B. pleiopetala lacks bracteoles) and the broader tepals on its staminate flowers (> 13 mm wide vs <11 mm wide). Distinguishing these species when sterile is more difficult, but Begonia marinae is a larger plant with leaf blades reaching 16 cm vs 9 cm in length.
description: Published as part of Moonlight, Peter & Fuentes, Alfredo F., 2022, AN UPDATED CHECKLIST AND KEY TO THE SPECIES OF BOLIVIAN BEGONIA, INCLUDING ONE NEW SPECIES, pp. 1-66 in Edinburgh Journal of Botany 79 (407) on pages 29-30, DOI: 10.24823/EJB.2022.407, http://zenodo.org/record/10553332
Production of pions, kaons and protons at high pT in sqrt{s_NN}=2.76 TeV Pb-Pb collisions
Creators: name: Velasquez, Antonio Ortiz
Publisher: name: arXiv
Year: 2012
Subjects: subject: High Energy Physics - Experiment (hep-ex)
subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: In this work we report on the production of charged pions, kaons, and (anti) protons in pp and Pb-Pb collisions at sqrt{s_NN}= 2.76 TeV for 3 < pT < 20 GeV/c. The evolution of the nuclear modification factor, RAA, with collision centrality and transverse momentum is discussed.
description: 4 pages, 3 figures. Proceedings for Quark Matter 2012, Washington D.C., August 13-18, 2012
title: How to Search for Biological Data? A Comparison of User Interfaces in a Semantic Search
Creators: name: Löffler, Felicitas
name: Klan, Friederike
name: König-Ries, Birgitta
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: 004
subject: 570
subject: 580
subject: 590
subject: 600
subject: 630

description: Data discovery is a frequent task in a scholar's daily work. In biodiversity, data search is a particular challenge. Here, scholars have complex information needs such as the rich interplay of organisms and their environments that cannot be unambiguously expressed with a traditional keyword search, e.g., Does tree diversity reduce competition in a subtropical forest? Therefore, data repositories usually offer interfaces that enable users to browse datasets by a pre-determined set of categories or facets. Faceted search is a good compromise between cumbersome user interfaces for structured queries (e.g., using SPARQL) and natural language queries that are hard to interpret for machines. Thus, developers can specify relevant relationships between entities explicitly and users can filter search results by selecting proper categories. For the given query, appropriate categories could be Organism and Habitat. However, there are two crucial design issues that have an impact on the effectiveness of category-based query interfaces: The choice of proper categories and the visual presentation of these categories in the query interface. In our work, we focus on the second aspect. We aim to develop two query interfaces: (a) a common one-box keyword search interface that analyzes the entered terms with respect to their categories automatically (b) a form-based query interface where users can enter their search keywords into a form with a query field per category. In both interfaces, the query keywords are matched against concepts in a knowledge base to make their semantics explicit. In case of a successful match the URI is used to obtain the labels of all sub-concepts to expand the query before sending it to the search engine. Retrieved results are displayed in a list. The aim of our system is not to answer the question completely but to support users in retrieving relevant datasets that give hints to answer a research question. In our talk, we will introduce the two interfaces and invite the conference participants to give feedback. We are particularly interested in a discussion on the appropriateness of the suggested user interfaces. Do scholars prefer a form-based user interface or only a one-field search? What other functions might be helpful, e.g., providing more information about other relations and properties from the concept in the ontology? What kind of explanations might be helpful to understand why a certain result was returned? KEYWORDS: user interfaces, semantic search, biological data, life sciences, biodiversity
description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World
Giant Spin Hall Effect Induced by Skew Scattering from Bismuth Impurities inside Thin Film CuBi Alloys
Creators: name: Niimi, Y.
name: Kawanishi, Y.
name: Wei, D. H.
name: Deranlot, C.
name: Yang, H. X.
name: Chshiev, M.
name: Valet, T.
name: Fert, A.
name: Otani, Y.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: We demonstrate that a giant spin Hall effect (SHE) can be induced by introducing a small amount of Bi impurities in Cu. Our analysis based on a new 3-dimensional finite element treatment of spin transport shows that the sign of the SHE induced by the Bi impurities is negative and its spin Hall (SH) angle amounts to -0.24. Such a negative large SH angle in CuBi alloys can be explained by applying the resonant scattering model proposed by Fert and Levy [Phys. Rev. Lett. 106, 157208 (2011)] to 6p impurities.
description: 5 pages, 4 figures
title: Towards a harmonization of distributed trait datasets
Creators: name: Schneider, Florian
name: Jochum, Malte
name: Le Provost, Gaëtane
name: Ostrowski, Andreas
name: Penone, Caterina
name: Simons, Nadja
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: 004
subject: 570
subject: 580
subject: 590
subject: 600
subject: 630

description: Trait-based research spans from evolutionary studies of individual-level properties to global patterns of biodiversity and ecosystem functioning. An increasing number of trait data is available for many different organism groups, being published as open access data on a variety of file hosting services. Thus, standardization between datasets is generally lacking due to heterogeneous data formats and types. The compilation of these published data into centralised databases remains a difficult and time-consuming task. We reviewed existing trait databases and online services, as well as initiatives for trait data standardization. Together with data providers and users we identified a need for a minimal trait-data terminology that is flexible enough to include traits from all types of organisms but simple enough to be adopted by different research communities. In order to facilitate reproducibility of analyses, the reuse of data and the combination of datasets from multiple sources, we propose a standardized vocabulary for trait data that is compatible with existing ontologies. We tested the vocabulary using trait datasets from several research groups working on different taxa and questions in a large project (the Biodiversity Exploratories, www.biodiversity-exploratories.de). By relying on unambiguous identifiers, the proposed minimal vocabulary for trait data captures the different degrees of resolution and measurement detail for multiple use cases of trait-based research. It further encourages the use of global Uniform Resource Identifiers (URI) for taxa and trait definitions, methods and units, thereby following the standards for a semantic web of scientific data. In addition, we developed an R-based tool to convert any trait dataset into the proposed standard format. The R-package facilitates the upload of own data to hosting services but also simplifies the access to published trait data. It also offers direct access to trait datasets that have been published in the public domain or under creative commons licenses. All these products are available through the Github platform (https://github.com/EcologicalTraitData) with the aim of a continuous collaboration and improvement with the research community. KEYWORDS: traits, standardization, ontology, semantic web, tools, distributed data, R package, Biodiversity Exploratories
description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World
A new low-B magnetar: Swift J1822.3-1606
Creators: name: Camero-Arranz, A.
name: Rea, N.
name: Israel, G. L.
name: Esposito, P.
name: Pons, J. A.
name: Mignani, R. P.
name: Turolla, R.
name: Zane, S.
name: Burgay, M.
name: Possenti, A.
name: Campana, S.
name: Enoto, T.
name: Gehrels, N.
name: Gogus, E.
name: Gotz, D.
name: Kouveliotou, C.
name: Makishima, K.
name: Mereghetti, S.
name: Oates, S. R.
Publisher: name: arXiv
Year: 2012
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: We report on the long term X-ray monitoring with Swift, RXTE, Suzaku, Chandra, and XMM-Newton of the outburst of the newly discovered magnetar Swift J1822.3-1606 (SGR 182-1606), from the first observations soon after the detection of the short X-ray bursts which led to its discovery (July 2011), through the first stages of its outburst decay (April 2012). Our X-ray timing analysis finds the source rotating with a period of P = 8.43772016(2) s and a period derivative Pdot = 8.3(2) x 10e-14 s s-1, which entails an inferred dipolar surface magnetic field of 2.7 x 10e13 G at the equator. This measurement makes Swift J1822.3-1606 the second lowest magnetic field magnetar (after SGR 0418+5729; Rea et al. 2010). Following the flux and spectral evolution from the beginning of the outburst, we find that the flux decreased by about an order of magnitude, with a subtle softening of the spectrum, both typical of the outburst decay of magnetars. By modeling the secular thermal evolution of Swift J1822.3+1606, we find that the observed timing properties of the source, as well as its quiescent X-ray luminosity, can be reproduced if it was born with a poloidal and crustal toroidal fields of Bp ~ 1.5 x 10e14 G and Btor ~ 7 x 10e14 G, respectively, and if its current age is ~550 kyr (more details in Rea et al. 2012).
description: Proceedings of IAUS 291 "Neutron Stars and Pulsars: Challenges and Opportunities after 80 years", J. van Leeuwen (ed.); 3 pages, 2 figures
Additional file 1 of Epigenetic age is associated with baseline and 3-year change in frailty in the Canadian Longitudinal Study on Aging
Creators: name: Verschoor, Chris P.
name: Lin, David T. S.
name: Kobor, Michael S.
name: Mian, Oxana
name: Ma, Jinhui
name: Pare, Guillaume
name: Ybazeta, Gustavo
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1: Supplementary tables and figures accompanying this manuscript.
Synchronization of Josephson oscillations in mesa array of BSCCO single crystal through the Josephson plasma waves in base crystal
Creators: name: Lin, Shi-Zeng
name: Koshelev, Alexei E.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Using mesa array of $\rm{Bi_{2}Sr_{2}CaCu_{2}O_{8}}$ single crystal was demonstrated recently as a promising route to enhance the radiation power generated by Josephson oscillations in mesas. We study the synchronization in such an array via the plasma waves in the base crystal. First, we analyze plasma oscillations inside the base crystal generated by the synchronized mesa array and the associated dissipation. We then solve the dynamic equation for superconducting phase numerically to find conditions for synchronization and to check the stability of synchronized state. We find that mesas are synchronized when the cavity resonance of mesas matches with that of the base crystal. An optimal configuration of mesa arrays is also obtained.
description: 6.3 pages, 7 figures
Accretion Disk Temperatures of QSOs: Constraints from the Emission Lines
Creators: name: Bonning, E. W.
name: Shields, G. A.
name: Stevens, A. C.
name: Salviander, S.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: QSO emission-line spectra are compared to predictions based on theoretical ionizing continua of accretion disks. Observed line intensities do not show the expected trend of higher ionization with higher accretion disk temperature as derived from the black hole mass and accretion rate. This suggests that, at least for accretion rates close to the Eddington limit, the inner disk does not reach temperatures as high as expected from standard disk theory. Modified radial temperature profiles, taking account of winds or advection in the inner disk, achieve better agreement with observation. This conclusion agrees with an earlier study of QSO continuum colors as a function of disk temperature. The emission lines of radio-detected and radio-undetected sources show different trends as a function of disk temperature.
description: 9 pages, 8 figures, submitted to ApJ
Shaping Laguerre-Gaussian laser modes with binary gratings using a Digital Micromirror Device
Creators: name: Lerner, Vitaly
name: Shwa, David
name: Drori, Yehonathan
name: Katz, Nadav
Publisher: name: arXiv
Year: 2012
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Laguerre-Gaussian (LG) beams are used in many research fields, such as microscopy, laser cavity modes and optical tweezing. We develop a holographic method of generating pure LG modes (amplitude and phase) with a binary amplitude-only Digital Micromirror Device (DMD), as an alternative to the commonly used phase-only Spatial Light Modulator. The advantages of such a DMD include very high frame rates, low cost and high damage thresholds. We show that the propagating shaped beams are self-similar and their phase fronts are of helical shape as demanded. We estimate the purity of the resultant beams to be above 94%.
Relevance Extraction from Sentinel-2 Multispectral Images using Deep Support Vector Data Description
Creators: name: Ghozatlou, Omid
name: Heredia Conde, Miguel
name: Datcu, Mihai
Publisher: name: Zenodo
Year: 2022

description: This study aims to provide a deep neural network (DNN) considering the statistical properties of data for robust relevance extraction. To achieve that, we take advantage of the properties of Wavelet Scattering Transform (WST) to guide the DNN. WST is a translation-invariant image representation that retains high-frequency information for classification while being stable to rotation. The resulting stable and low-variance features make the clustering of data easier for DNN. The importance of WST in guiding the DNN for the classification of highly textured images is evaluated in terms of accuracy gain and robustness to outlier pollution. Superior robustness to both translation and rotation is also demonstrated.
title: moveStore: an extensible cloud-based framework for applications dealing with movement data
Creators: name: Naimi, Babak
name: Safi, Kamran
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: movement, movebank, cloud computing, web application, shiny
subject: 004
subject: 570
subject: 580
subject: 600
subject: 630

description: In recent decades, huge efforts have been put to make multiple-sources of spatial and temporal data available through data repositories, followed by explosive progress in technological developments of data providers, crowdsourcing, drones, sensor networks, etc. that can be expected to continue for the next decades. Examples are global initiatives such as the movebank data repository containing animal movement data at large spatial scales over long time periods, as well as the ICARUS satellite-based animal tracking technology (Wikelski et al., 2007). The question is that whether and to what extent analytical methods are developed/adopted to deal with such progress in data? This research aims to introduce moveStore, a platform that is designed on a cloud to support and boost the progresses in methods/workflows/applications developments, followed the progresses in data developments. Analogous to a data repository, moveStore provides a specific repository for methodological developments that have been implemented as a suit of functions and classes that may also be framed into an application. moveStore is an open-source and extensible framework (Naimi and Araújo, 2016) that intends to facilitate sharing and distributing of software applications dealing with movement data. Users can share the analytical functions, procedures, workflows either packaged as software applications (Apps) or developed as simple functions. The contributions, followed by appropriate metadata, can then be accessible by other users. The applications in moveStore are usually developed using R shiny web framework, and the platform is implemented on a cloud-based computational engine with a user interface on the web through which users can access to all the Apps registered on the platform and search for a specific App (same as in an App store). REFERENCES: Naimi, B., Araújo, M.B., 2016. sdm: a reproducible and extensible R platform for species distribution modelling. Ecography 39, 368-375. Wikelski, M., Kays, R.W., Kasdin, N.J., Thorup, K., Smith, J.A., Swenson, G.W., 2007. Going wild: what a global small-animal tracking system could do for experimental biologists. J Exp Biol 210, 181-186.
description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing WorldmoveStore: an extensible cloud-based framework for applications dealing with movement data, vol. PPT
КРУГЛЫЙ СТОЛ, ОРГАНИЗОВАННЫЙ ОСКиП на тему: “СОЗАВИСИМОСТЬ В ПОЛИАМОРНЫХ ОТНОШЕНИЯХ”
Creators: name: Черников Александр Викторович
name: Травкова Марина Рахимжоновна
name: Гольдман Софья
name: Хилл Юлия Владимировна
Publisher: name: Психология и психотерапия семьи
Year: 2023
Subjects: полиамория
полиаморные люди
полиаморные отношения

description: Что такое полиамория, бывает ли она истинной или ложной? Почему одним людям она подходит, а другим нет? С какими запросами чаще обращаются полиаморные люди и как выстраивать терапевтическую работу? Участники круглого стола постарались осветить вопросы, касающиеся немоногамного формата отношений, взглянуть на полиаморию через линзу привязанности и ответить на вопросы слушателей.
Extended X-ray emission around RRAT J1819-1458
Creators: name: Camero-Arranz, A.
name: Rea, N.
name: McLaughlin, M. A.
name: Bucciantini, N.
name: Slane, P.
name: Gaensler, B.
name: Torres, D.
name: Stella, L.
name: de Onña, E.
name: Israel, G.
name: Camilo, F.
name: Possenti, A.
Publisher: name: arXiv
Year: 2012
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: We present new imaging and spectral analysis of the recently discovered extended X-ray emission around the high-magnetic-field rotating radio transient RRAT J1819-1458. We used two Chandra observations, taken on 2008 May 31 and 2011 May 28. The diffuse X-ray emission was detected with a significance of ~19sigma in the image obtained by combining the two observations. Long-term spectral variability has not been observed. Possible scenarios for the origin of this diffuse X-ray emission, further detailed in Camero-Arranz et al. (2012), are here discussed.
description: Proceedings of IAUS 291 "Neutron Stars and Pulsars: Challenges and Opportunities after 80 years", J. van Leeuwen (ed.); 4 pages, 3 figures
Additional file 1 of Importance of extracellular vesicle secretion at the blood–cerebrospinal fluid interface in the pathogenesis of Alzheimer’s disease
Creators: name: Vandendriessche, Charysse
name: Balusu, Sriram
name: Van Cauwenberghe, Caroline
name: Brkic, Marjana
name: Pauwels, Marie
name: Plehiers, Nele
name: Bruggeman, Arnout
name: Dujardin, Pieter
name: Van Imschoot, Griet
name: Van Wonterghem, Elien
name: Hendrix, An
name: Baeke, Femke
name: De Rycke, Riet
name: Gevaert, Kris
name: Vandenbroucke, Roosmarijn E.
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 1. Supplementary Figures S1-S6 and Appendix Table S1.
Gene Regulation by Riboswitches with and without Negative Feedback Loop
Creators: name: Lin, Jong-Chin
name: Thirumalai, D.
Publisher: name: arXiv
Year: 2012
Subjects: subject: Molecular Networks (q-bio.MN)
subject: FOS: Biological sciences

description: Riboswitches, structured elements in the untranslated regions of messenger RNAs, regulate gene expression by binding specific metabolites. We introduce a kinetic network model that describes the functions of riboswitches at the systems level. Using experimental data for flavin mono nucleotide riboswitch as a guide we show that efficient function, implying a large dynamic range without compromising the requirement to suppress transcription, is determined by a balance between the transcription speed, the folding and unfolding rates of the aptamer, and the binding rates of the metabolite. We also investigated the effect of negative feedback accounting for binding to metabolites, which are themselves the products of genes that are being regulated. For a range of transcription rates negative feedback suppresses gene expression by nearly 10 fold. Negative feedback speeds the gene expression response time, and suppresses the change of steady state protein concentration by half relative to that without feedback, when there is a modest spike in DNA concentration. A dynamic phase diagram expressed in terms of transcription speed, folding rates, and metabolite binding rates predicts different scenarios in riboswitch-mediated transcription regulation.
description: 12 pages, 8 figures
title: Nutrient addition affects leaf N-P scaling relationship in Arabidopsis thaliana
Creators: name: Yan, Zhengbing
name: Han, Wenxuan
name: Tian, Di
name: Fang, Jingyun
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: Arabidopsis thaliana, multiple elements, N and P supply, Nutrient Availability-Individual Variability Hypothesis, plant stoichiometry, scaling relationship
subject: 004
subject: 570
subject: 580
subject: 590
subject: 600
subject: 630

description: Ambient nutrient changes influence the coupling of nitrogen (N) and phosphorus (P) in terrestrial ecosystems, but whether it could alter the scaling relationship of plant leaf N to P concentrations remains unclear. Moreover, knowledge about how multi-elemental stoichiometry responds to varying N and P availabilities remains limited. Here we conducted experimental manipulations using Arabidopsis thaliana, with five N and P addition levels and nine repeated experiments. We found that the scaling exponent of leaf N to P concentrations decreased with increasing N levels, but increased with increasing P levels. This suggests that high nutrient availability decreases the variability of its own concentration, but promotes the fluctuation in another tightly associated nutrient concentration in leaves among plant individuals. We call this as Nutrient Availability–Individual Variability Hypothesis. In addition, N and P supply exerted differential influences on the concentrations of multi-elements in leaves. Compared with the green-leaves, the senesced-leaves had higher variability of C, N, P, K and Mg concentrations but lower variability of Ca concentration under varying nutrient availabilities. This suggests that stage-dependent pattern of leaf stoichiometric homeostasis relies on the type of elements, and the elemental feature should be considered when choosing a more favorable tissue in plants for diagnosing the nutrient availability in ambient environments. These findings provide a novel mechanism for understanding the dynamic processes of population structure and functioning under global nutrient changes, which should be incorporated into modeling stoichiometric growth in terrestrial ecosystems. Furthermore, our study can advance the holistic understanding about plant eco-physiological response and adaption under global nutrient changes from the stoichiometric perspective of multiple elements beyond N and P.
description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World
Defect Management Strategies in Software Development
Creators: name: Suma, V.
name: Nair, T. R. Gopalakrishnan
Publisher: name: arXiv
Year: 2012
Subjects: subject: Software Engineering (cs.SE)
subject: FOS: Computer and information sciences

description: Software is a unique entity that has laid a strong impact on all other fields either related or not related to software. These include medical, scientific, business, educational, defence, transport, telecommunication to name a few. State-of-the-art professional domain activities demands the development of high quality software. High quality software attributes to a defect-free product, which is competent of producing predictable results and remains deliverable within time and cost constraints. It should be manageable with minimum interferences. It should also be maintainable, dependable, understandable and efficient. Thus, a systematic approach towards high quality software development is required due to increased competitiveness in today's business world, technological advances, hardware complexity and frequently changing business requirements.
description: 27 Pages, 3 Figures, 5 Tables, 12 Equations
Additional file 1 of Covid-19 pandemic impact on maternal and child health services access in Nampula, Mozambique: a mixed methods research
Creators: name: das Neves Martins Pires, Paulo Henrique
name: Macaringue, Cynthia
name: Abdirazak, Ahmed
name: Mucufo, Jaibo Rassul
name: Mupueleque, Martins Abudo
name: Zakus, David
name: Siemens, Ronald
name: Belo, Celso Fernando
Publisher: name: figshare
Year: 2021
Subjects: Medicine
Cell Biology
Biotechnology
Cancer
Science Policy

description: Additional file 1.
Parameterised Multiparty Session Types
Creators: name: Denielou, Pierre-Malo
name: Yoshida, Nobuko
name: Bejleri, Andi
name: Hu, Raymond
Publisher: name: arXiv
Year: 2012
Subjects: subject: Logic in Computer Science (cs.LO)
subject: FOS: Computer and information sciences
subject: F.3.3, D.1.3, F.1.1, F.1.2

description: For many application-level distributed protocols and parallel algorithms, the set of participants, the number of messages or the interaction structure are only known at run-time. This paper proposes a dependent type theory for multiparty sessions which can statically guarantee type-safe, deadlock-free multiparty interactions among processes whose specifications are parameterised by indices. We use the primitive recursion operator from Gödel's System T to express a wide range of communication patterns while keeping type checking decidable. To type individual distributed processes, a parameterised global type is projected onto a generic generator which represents a class of all possible end-point types. We prove the termination of the type-checking algorithm in the full system with both multiparty session types and recursive types. We illustrate our type theory through non-trivial programming and verification examples taken from parallel algorithms and Web services usecases.
description: LMCS 2012
Additional file 1 of Protocol for an interventional study to reduce postpartum weight retention in obese mothers using the internet of things and a mobile application: a randomized controlled trial (SpringMom)
Creators: name: Kawasaki, Maki
name: Mito, Asako
name: Waguri, Masako
name: Sato, Yuichi
name: Abe, Emiko
name: Shimada, Mayumi
name: Fukuda, Sayuri
name: Sasaki, Yuki
name: Fujikawa, Kei
name: Sugiyama, Takashi
name: Ota, Erika
name: Nakazawa, Jin
name: Okoshi, Tadashi
name: Takimoto, Hidemi
name: Honda, Yuka
name: Inoue, Eisuke
name: Hiramatsu, Yuji
name: Arata, Naoko
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer

description: Additional file 1: Supplementary Table S1. Hana-chan's best chance for pregnancy and postpartum weight loss.
title: The TRY Database System
Creators: name: Boenisch, Gerhard
name: Kattge, Jens
name: Wirth, Christian
Publisher: name: Friedrich-Schiller-Universität Jena
Year: 2018
Subjects: subject: Database, traits
subject: 004
subject: 570
subject: 580
subject: 590
subject: 600
subject: 630

description: The TRY initiative (www.try-db.org) is a network of vegetation scientists providing curated plant trait data for the scientific community. The TRY Database currently contains about 7 million trait records for nearly 3000 different traits. The flexible database structure can hold any number of traits and a generic program can import any kind of data without requiring a template. About 10 million trait records for about 100 requests are released on a monthly basis. This is organized via the TRY Data Portal, which facilitates data contribution, exploration and customized requests. The Dataset Custodian Centre allows managing the status of contributed datasets and monitoring the use of these data from requests to scientific publications. The Request PI Centre allows managing and monitoring requests. Both centres facilitate direct contact of data contributors and users. In addition to the TRY Database we have established a file archive, which facilitates publication and DOIs for else unpublished plant trait datasets. The TRY Data Portal has evolved toward a long-term scientific data infrastructure, which combines the advantages of easy access to curated plant trait data almost ready for analyses, with direct contact of data providers and users, the opportunity for data providers to publish individual datasets and track the use of their data. This presentation will introduce details of the TRY database system.
description: ICEI 2018 : 10th International Conference on Ecological Informatics- Translating Ecological Data into Knowledge and Decisions in a Rapidly Changing World
Additional file 2 of Protocol for an interventional study to reduce postpartum weight retention in obese mothers using the internet of things and a mobile application: a randomized controlled trial (SpringMom)
Creators: name: Kawasaki, Maki
name: Mito, Asako
name: Waguri, Masako
name: Sato, Yuichi
name: Abe, Emiko
name: Shimada, Mayumi
name: Fukuda, Sayuri
name: Sasaki, Yuki
name: Fujikawa, Kei
name: Sugiyama, Takashi
name: Ota, Erika
name: Nakazawa, Jin
name: Okoshi, Tadashi
name: Takimoto, Hidemi
name: Honda, Yuka
name: Inoue, Eisuke
name: Hiramatsu, Yuji
name: Arata, Naoko
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer

description: Additional file 2: Questionnaires.