cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Fostering critical counterspaces in the borderlands: Engaging latin@ elementary youth in Chican@ studies
Creators: name: Morales, Socorro
Publisher: name: University of Utah
Year: 2019
Subjects: Multicultural Education
Elementary education
Ethnic studies

description: Chican@ and Latin@ students have persistently had low high school graduation rates, as well as low college matriculation and completion rates. A wide range of literature suggests that ethnic studies-based educational approaches can positively engage students of color academically, in ways that markedly improve their academic achievement. However, the implications for implementing these types of rigorous, curricular models in elementary school settings for youth of color have yet to be fully explored. In filling this gap, this research project is an ethnographic, qualitative case study that utilized Critical Race Theory (CRT) in Education and Anzaldúa's Borderlands, in the design and implementation of an after school Chican@ centric course for fifth-grade Latin@ elementary youth. Drawing from the CRT literature on counterspaces, this research centered the process of co-developing a Chican@ studies counterspace (the after school course) with fifth-grade youth. Specifically, this research examined how the counterspace impacted the students' understanding of their own raced, classed, and sexed positionalities. Findings from this study illuminate the complex and multifaceted nature of developing counterspaces with Latin@ youth, and by extension young people of color. Specifically, the curriculum and pedagogy developed within and for the counterspace centered Chicana/Latina feminist ways of knowing. Both a Chican@ border/transformative pedagogy and a muxerista pedagogy allowed me to inform and frame my work within a Chicana/Latina feminist approach, one that encouraged a practice of bringing in our whole and multiple selves. Though many men of color have written about pedagogical practices with young people of color in their scholarship, they often do not centralize a feminista praxis in their pedagogy. Feminist pedagogical praxis allows one to center healing, the bodymindspirit, and contradiction as integral parts connected to the way that we learn and engage with one another. In particular, feminist of color frameworks center the body as a pedagogical tool. I argue that pedagogical frameworks that work to make sense of contradiction and center desire can lead to recognizing and understanding possibilities for healing and transformation, particularly within counterspaces.
Functions of Double-Stranded RNA and ADAR RNA Editing Enzymes in Caenorhabditis elegans
Creators: name: Reich, Daniel Phillip
Publisher: name: University of Utah
Year: 2019
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Biochemistry
subject: Molecular biology

description: Adenosine deaminases that act on RNA (ADARs) catalyze adenosine-to-inosine (A-to-I) conversion within double-stranded RNA (dsRNA). Since inosine prefers to base-pair with cytidine, it is read by cellular machinery like the ribosome as guanosine. Thus, A-to-I RNA editing can alter the translation of edited codons in cellular mRNAs. However, genome-wide A-to-I editing studies have demonstrated that editing in coding regions is exceedingly rare in most organisms. Instead, ADAR editing is abundant in noncoding sequences associated with protein-coding genes, particularly in introns and untranslated regions (UTRs). By extension, dsRNA structures must also be prevalent in such noncoding regions. These observations raise questions as to the purpose of RNA editing and dsRNA structure in gene-associated sequences. In this dissertation, I explore the physiological functions of ADAR enzymes and their noncoding dsRNA substrates in the nematode Caenorhadbitis elegans. First, I describe in Chapter 2 how ADARs prevent processing and silencing of cellular dsRNAs by the antiviral RNA interference (RNAi) machinery. Using RNAseq, I defined ADAR-edited dsRNAs, or editing-enriched regions (EERs), expressed during four stages of C. elegans development. I found that, in adr-1;adr-2 mutants, EERs gave rise to abundant ~23 nucleotide (nt) small interfering RNAs (siRNAs), and were involved in silencing their associated genes by an RNAi-dependent mechanism. Additionally, disruption of the 26G endogenous siRNA (endo-siRNA) pathway in adr-1;adr-2 mutant backgrounds caused a synthetic phenotype that was rescued by deleting factors involved in antiviral RNAi. These results suggest that ADARs limit RNAi activity against cellular dsRNAs, presenting a striking functional parallel to mammalian ADAR1, which prevents aberrant innate immune signaling by the antiviral dsRNA sensor MDA5. Though the work in Chapter 2 suggests that gene-associated dsRNAs can effect transcriptional silencing, in Chapter 3, I detail analyses suggesting that dsRNA-associated genes in fact exhibit higher-than-expected expression. I used three computational methods to define genome-wide loci in C. elegans encoding dsRNA structures, observing their enrichment on autosome distal arms. Despite that genes in distal arm regions are overall less highly expressed and less likely to be essential than genes in autosome centers, dsRNAs in these regions were enriched within essential and highly expressed genes. These analyses could not explicitly determine if gene expression patterns correlated with dsRNA formation or another property common to these loci. However, they suggest that dsRNA structures may function as important gene regulatory elements. In Chapter 4, I propose additional experiments to test contributions of dsRNA structure to gene expression regulation.
Additional file 3: of Analysis of Theileria orientalis draft genome sequences reveals potential species-level divergence of the Ikeda, Chitose and Buffeli genotypes
Creators: name: Bogema, Daniel
name: Micallef, Melinda
name: Liu, Michael
name: Padula, Matthew
name: Djordjevic, Steven
name: Darling, Aaron
name: Jenkins, Cheryl
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Marine Biology

description: Validation of SNV variant calling pipeline. Validation statistics of SNV calling pipeline generated by comparison to short sections of Sanger sequencing. (DOC 32 kb)
Formalization of Steering-Plane Bipeds: Characterization, Motion Planning and Gait Optimization
Creators: name: Floyd, Marshall Daniel
Publisher: name: University of Utah
Year: 2019
Subjects: subject: Mechanical engineering
subject: FOS: Mechanical engineering
subject: Robotics

description: This dissertation defines a new class of climbing robots, steering-plane bipeds, which encompasses a large number of existing climbing robots. Three major levels of motion planning are characterized which are common to this class of robots, namely, path planning, step planning, and gait planning. The unified presentation of related motion planning techniques is more generally applicable and more thorough than related algorithms in other literature, while more explicitly identifying limitations and tradeoffs due to alternate design choices within the class of steering-plane bipeds. A novel spline-based method for generating gaits is presented which uses separate path and time rate controls, and explicitly defined foot approach and departure directions that allows 1) a nominal guarantee of collision-free foot trajectories when close to the desired step configuration, 2) independent control of gait shape and speed, and 3) a unified representation of the four gait families of steering-plane bipeds: flipping, inchworm, step-through, and spinning gaits. This dissertation presents a thorough examination of the variations within each gait family, rather than merely presenting a representative instance of each. Concrete case studies applying the techniques of this dissertation are presented for optimizing the gaits for overall speed, energy efficiency, and minimum gripping force and moment. The results highlight that many common gaits in the literature are far from optimal. Results and general rules of thumb for gait planning are extracted that allow guidance for obtaining good results even if using alternate planning techniques without optimization.
title: ADCO, Ordre cistercien et abbaye de Cîteaux : comptes pour l'ordre (1337-1347), comptes du boursier (1377-1402) (11 H 1160), f. 00228
Creators: name: de la Côte-d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CBMA/CG21/F.PETOT/2017
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: comptes
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge

description: Ordre cistercien et abbaye de Cîteaux : comptes pour l'ordre (1337-1347), comptes du boursier (1377-1402), Archives départementales de la Côte-d'Or, (11 H 1160). Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Ordre cistercien et abbaye de Cîteaux : comptes pour l'ordre (1337-1347), comptes du boursier (1377-1402), Archives départementales de la Côte-d'Or, (11 H 1160), f. 00228, in Projet CBMA - Corpus Burgundiae Medii Aevi \[Ressource en ligne\], https:// manuscrits.cbma-project.eu/
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261
Variational Monte Carlo with Large Patched Transformers
Creators: name: Sprague, Kyle
name: Czischek, Stefanie
Publisher: name: arXiv
Year: 2023
Subjects: subject: Quantum Physics (quant-ph)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences

description: Large language models, like transformers, have recently demonstrated immense powers in text and image generation. This success is driven by the ability to capture long-range correlations between elements in a sequence. The same feature makes the transformer a powerful wavefunction ansatz that addresses the challenge of describing correlations in simulations of qubit systems. Here we consider two-dimensional Rydberg atom arrays to demonstrate that transformers reach higher accuracies than conventional recurrent neural networks for variational ground state searches. We further introduce large, patched transformer models, which consider a sequence of large atom patches, and show that this architecture significantly accelerates the simulations. The proposed architectures reconstruct ground states with accuracies beyond state-of-the-art quantum Monte Carlo methods, allowing for the study of large Rydberg systems in different phases of matter and at phase transitions. Our high-accuracy ground state representations at reasonable computational costs promise new insights into general large-scale quantum many-body systems.
description: 15 pages, 5 figures
System information propagation for spin structures
Creators: name: Mironowicz, Piotr
name: Należyty, Paweł
name: Horodecki, Paweł
name: Korbicz, Jarosław K.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We study in details decoherence process of a spin register, coupled to a spin environment. We use recently developed methods of information transfer study in open quantum systems to analyze information flow between the register and its environment. We show that there are regimes when not only the register decoheres effectively to a classical bit string, but this bit string is redundantly encoded in the environment, making it available to multiple observations. This process is more subtle than in a case of a single qubit due to possible presence of protected subspaces: Decoherence free subspaces and, so called, orthogonalization free subspaces. We show that this leads to a rich structure of coherence loss/protection in the asymptotic state of the register and a part of its environment. We formulate a series of examples illustrating these structures.
description: 11+3 pages
Three new glycosides from the stems of Eurya chinensis R. Br
Creators: name: Liang, Hui-Jun
name: Li, Qian-Ran
name: Li, Bai-Lin
name: Ni, Chen
name: Zhang, Wei-Jie
name: Fan, Yu-Wen
name: Ao, Zhuo-Yi
name: Hu, Juan-Juan
name: Yuan, Jie
name: Wu, Jie-Wei
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Pharmacology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Mathematical Sciences not elsewhere classified
subject: Cancer

description: Two new phenolic glycosides (1 and 2), one known analogue (3), along with a new diterpene glucoside (4) were obtained from ethanolic extract of the stems of Eurya chinensis R. Br. The structures of these isolated compounds were identified by extensive analysis of HRESIMS and NMR spectroscopic data. The cytotoxicities of these compounds were evaluated on MCF-7, A549, HepG2, CaCo2 and 5-8 F cell lines by MTT method, but no obvious activities were observed.
SL(N+1,R) Toda Solitons in Supergravities
Creators: name: Lu, H.
name: Pope, C. N.
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We construct $(D-3)$-brane and instanton solutions using $N \le 10-D$ one-form field strengths in $D$ dimensions, and show that the equations of motion can be cast into the form of the $SL(N+1,R)$ Toda equations. For generic values of the charges, the solutions are non-supersymmetric; however, they reduce to the previously-known multiply-charged supersymmetric solutions when appropriate charges vanish.
description: LATEX, 16 pages, no figures
Spontaneous Self-Constraint in Active Nematic Flows
Creators: name: Head, Louise C.
name: Dore, Claire
name: Keogh, Ryan
name: Bonn, Lasse
name: Doostmohammadi, Amin
name: Thijssen, Kristian
name: Lopez-Leon, Teresa
name: Shendruk, Tyler N.
Publisher: name: arXiv
Year: 2023
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Biological Physics (physics.bio-ph)
subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences

description: Active processes drive and guide biological dynamics across scales -- from subcellular cytoskeletal remodelling, through tissue development in embryogenesis, to population-level bacterial colonies expansion. In each of these, biological functionality requires collective flows to occur while self-organized structures are protected; however, the mechanisms by which active flows can spontaneously constrain their dynamics to preserve structure have not previously been explained. By studying collective flows and defect dynamics in active nematic films, we demonstrate the existence of a self-constraint -- a two-way, spontaneously arising relationship between activity-driven isosurfaces of flow boundaries and mesoscale nematic structures. Our results show that self-motile defects are tightly constrained to viscometric surfaces -- contours along which vorticity and strain-rate balance. This in turn reveals that self-motile defects break mirror symmetry when they move along a single viscometric surface, in contrast with expectations. This is explained by an interdependence between viscometric surfaces and bend walls -- elongated narrow kinks in the orientation field. Although we focus on extensile nematic films, numerical results show the constraint holds whenever activity leads to motile half-charge defects. This mesoscale cross-field self-constraint offers a new framework for tackling complex 3D active turbulence, designing dynamic control into biomimetic materials, and understanding how biological systems can employ active stress for dynamic self-organization.
description: 10 pages, 4 figures
Dark matter haloes: a multistream view
Creators: name: Ramachandra, Nesar S.
name: Shandarin, Sergei F.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: Mysterious dark matter constitutes about 85% of all mass in the Universe. Clustering of dark matter plays the dominant role in the formation of all observed structures on scales from a fraction to a few hundreds of Mega-parsecs. Galaxies play a role of lights illuminating these structures so they can be observed. The observations in the last several decades have unveiled opulent geometry of these structures currently known as the cosmic web. Haloes are the highest concentrations of dark matter and host luminous galaxies. Currently the most accurate modeling of dark matter haloes is achieved in cosmological N-body simulations. Identifying the haloes from the distribution of particles in N-body simulations is one of the problems attracting both considerable interest and efforts. We propose a novel framework for detecting potential dark matter haloes using the field unique for dark matter -- multistream field. The multistream field emerges at the nonlinear stage of the growth of perturbations because the dark matter is collisionless. Counting the number of velocity streams in gravitational collapses supplements our knowledge of spatial clustering. We assume that the virialized haloes have convex boundaries. Closed and convex regions of the multistream field are hence isolated by imposing a positivity condition on all three eigenvalues of the Hessian estimated on the smoothed multistream field. In a single-scale analysis of high multistream field resolution and low softening length, the halo substructures with local multistream maxima are isolated as individual halo sites.
description: 16 pages, 15 figures. Accepted for publication in MNRAS. Portions of this work appeared as arXiv:1608.05469v1, which was divided during the refereeing process of the journal, and published separately
Mesoscopic pairing without superconductivity
Creators: name: Hofmann, Johannes
Publisher: name: arXiv
Year: 2017
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Quantum Gases (cond-mat.quant-gas)
subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: We discuss pairing signatures in mesoscopic nanowires with variable attractive pairing interaction. Depending on wire length, density, and interaction strength, these systems realize a simultaneous bulk-to-mesoscopic and BCS-BEC crossover, which we describe in terms of the parity parameter that quantifies the odd-even energy difference and generalizes the bulk Cooper pair binding energy to mesoscopic systems. We show that the parity parameter can be extracted from recent measurements of conductance oscillations in SrTiO$_3$ nanowires by G. Cheng et al. [Nature 521, 196 (2015)], where it marks the critical magnetic field that separates pair and single-particle currents. Our results place the experiment in the fluctuation-dominated mesoscopic regime on the BCS side of the crossover.
description: 6 pages, 4 figures
ผลของ NAA และ BA ต่อการพัฒนาของชิ้นส่วนแววมยุราที่เพาะเลี้ยงต่างกันในสภาพปลอดเชื้อ
Creators: name: นนทกร พรธนะวัฒน์
Publisher: name: Thammasat University
Year: 2019
Subjects: cotyledon
leaf
internode
tissue culture

description: Thai Journal of Science and Technology, 8, 6, 642-649
Additional file 3: of Development of a computational promoter with highly efficient expression in tumors
Creators: name: Ho, Shu-Yi
name: Bo-Hau Chang
name: Chen-Han Chung
name: Lin, Yu-Ling
name: Cheng-Hsun Chuang
name: Pei-Jung Hsieh
name: Wei-Chih Huang
name: Nu-Man Tsai
name: Sheng-Chieh Huang
name: Yen-Ku Liu
name: Yu-Chih Lo
name: Kuang-Wen Liao
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: The genes of regulate angiogenesis and cell growth. (PDF 102Â kb)
The Higgs properties in the MSSM after the LHC Run-2
Creators: name: Zhao, Jun
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: We scrutinize the parameter space of the SM-like Higgs boson in the minimal supersymmetric standard model (MSSM) under current experimental constraints. The constraints are from (i) the precison electroweak data and various flavor observables; (ii) the direct 22 separate ATLAS searches in Run-1; (iii) the latest LHC Run-2 Higgs data and tri-lepton search of electroweakinos. We perform a scan over the parameter space and find that the Run-2 data can further exclude a part of parameter space. For the property of the SM-like Higgs boson, its gauge couplings further approach to the SM values with a deviation below 0.1\%, while its Yukawa couplings $hb\bar{b}$ and $hτ\barτ$ can still sizably differ from the SM predictions by several tens percent.
description: 12 pages, 4 figures
Three new glycosides from the stems of Eurya chinensis R. Br
Creators: name: Liang, Hui-Jun
name: Li, Qian-Ran
name: Li, Bai-Lin
name: Ni, Chen
name: Zhang, Wei-Jie
name: Fan, Yu-Wen
name: Ao, Zhuo-Yi
name: Hu, Juan-Juan
name: Yuan, Jie
name: Wu, Jie-Wei
Publisher: name: Taylor & Francis
Year: 2022
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Pharmacology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Mathematical Sciences not elsewhere classified
subject: Cancer

description: Two new phenolic glycosides (1 and 2), one known analogue (3), along with a new diterpene glucoside (4) were obtained from ethanolic extract of the stems of Eurya chinensis R. Br. The structures of these isolated compounds were identified by extensive analysis of HRESIMS and NMR spectroscopic data. The cytotoxicities of these compounds were evaluated on MCF-7, A549, HepG2, CaCo2 and 5-8 F cell lines by MTT method, but no obvious activities were observed.
Sensing-Aided Peer-to-Peer Millimeter-Wave Communication
Creators: name: Li, Xiangyu
name: Guo, Sidong
name: Malik, Shez
Publisher: name: arXiv
Year: 2023
Subjects: subject: Signal Processing (eess.SP)
subject: Systems and Control (eess.SY)
subject: FOS: Electrical engineering, electronic engineering, information engineering

description: One of the bottlenecks of modern communications is to enable sensing and mutual communication simultaneously without causing scheduling conflicts, and how sensing may be leveraged to help directional communication accuracy. To this end, we propose and implement a novel peer-to-peer (P2P) millimeter-wave communication system to jointly achieve beamforming and sensing. A radar and IMU-assisted tracking and beamforming algorithm is designed and tested. The results show that a robust tracking capacity with an overall higher throughput can be obtained. It is also hopeful that based on our proposed system, our design and implementation can be deployed in a more scalable manner for future extensions.
Measurement of the ppbar to ttbar production cross section at sqrt(s)=1.96 TeV in the fully hadronic decay channel
Creators: name: D0 Collaboration
name: Abazov, V.
Publisher: name: arXiv
Year: 2006
Subjects: subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: A measurement of the top quark pair production cross section in proton anti-proton collisions at an interaction energy of sqrt(s)=1.96 TeV is presented. This analysis uses 405 pb-1 of data collected with the D0 detector at the Fermilab Tevatron Collider. Fully hadronic ttbar decays with final states of six or more jets are separated from the multijet background using secondary vertex tagging and a neural network. The ttbar cross section is measured as sigma(ttbar)=4.5 -1.9 +2.0 (stat) -1.1 +1.4 (syst) +/- 0.3 (lumi) pb for a top quark mass of m(t) = 175 GeV/c^2.
description: 10 pages, 10 figures, submitted to Phys. Rev. D
A precise measurement of the orbital period parameters of Cygnus X-3
Creators: name: Bhargava, Yash
name: Rao, A. R.
name: Singh, K. P.
name: Choudhury, Manojendu
name: Bhattacharyya, S.
name: Chandra, S.
name: Dewangan, G. C.
name: Mukerjee, K.
name: Stewart, G. C.
name: Bhattacharya, D.
name: Mithun, N. P. S.
name: Vadawale, S. V.
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: We present X-ray light curves of Cygnus X-3 as measured by the recently launched AstroSat satellite. The light curve folded over the binary period of 4.8 hours shows a remarkable stability over the past 45 years and we find that we can use this information to measure the zero point to better than 100 s. We revisit the historical binary phase measurements and examine the stability of the binary period over 45 years. We present a new binary ephemeris with the period and period derivative determined to an accuracy much better than previously reported. We do not find any evidence for a second derivative in the period variation. The precise binary period measurements, however, indicate a hint of short term episodic variations in periods. Interestingly, these short term period variations coincide with the period of enhanced jet activity exhibited by the source. We discuss the implications of these observations on the nature of the binary system.
description: 8 pages, 7 figures, Accepted for publication in ApJ
The Effects of Protostellar Disk Turbulence on CO Emission Lines: A Comparison Study of Disks with Constant CO Abundance vs. Chemically Evolving Disks
Creators: name: Yu, Mo
name: Evans, Neal J.
name: Dodson-Robinson, Sarah E.
name: Willacy, Karen
name: Turner, Neal J.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: Turbulence is the leading candidate for angular momentum transport in protoplanetary disks and therefore influences disk lifetimes and planet formation timescales. However, the turbulent properties of protoplanetary disks are poorly constrained observationally. Recent studies have found turbulent speeds smaller than what fully-developed MRI would produce (Flaherty et al. 2015, 2017). However, existing studies assumed a constant CO/H2 ratio of 0.0001 in locations where CO is not frozen-out or photo-dissociated. Our previous studies of evolving disk chemistry indicate that CO is depleted by incorporation into complex organic molecules well inside the freeze-out radius of CO. We consider the effects of this chemical depletion on measurements of turbulence. Simon et al. (2015) suggested that the ratio of the peak line flux to the flux at line center of the CO J=3-2 transition is a reasonable diagnostic of turbulence, so we focus on that metric, while adding some analysis of the more complex effects on spatial distribution. We simulate the emission lines of CO based on chemical evolution models presented in Yu et al. (2016), and find that the peak-to-trough ratio changes as a function of time as CO is destroyed. Specifically, a CO-depleted disk with high turbulent velocity mimics the peak-to-trough ratios of a non-CO-depleted disk with lower turbulent velocity. We suggest that disk observers and modelers take into account the possibility of CO depletion when using line peak-to-trough ratios to constrain the degree of turbulence in disks. Assuming that CO/H2 = 0.0001 at all disk radii can lead to underestimates of turbulent speeds in the disk by at least 0.2 km/s.
description: 12 pages, including 10 figures. Accepted for publication in Astrophysical Journal. Revised following comments from community
One-way Quantum Key Distribution System based on Planar Lightwave Circuits
Creators: name: Nambu, Yoshihiro
name: Yoshino, Ken'ichiro
name: Tomita, Akihisa
Publisher: name: arXiv
Year: 2006
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We developed a one-way quantum key distribution (QKD) system based upon a planar lightwave circuit (PLC) interferometer. This interferometer is expected to be free from the backscattering inherent in commercially available two-way QKD systems and phase drift without active compensation. A key distribution experiment with spools of standard telecom fiber showed that the bit error rate was as low as 6% for a 100-km key distribution using an attenuated laser pulse with a mean photon number of 0.1 and was determined solely by the detector noise. This clearly demonstrates the advantages of our PLC-based one-way QKD system over two-way QKD systems for long distance key distribution.
description: 23 pages, 5 figures
Correlation of density fluctuation in a magnetized QCD matter near the critical end point
Creators: name: Rahaman, Mahfuzur
name: Hasanujjaman, Md
name: Sarwar, Golam
name: Bhattacharyya, Abhijit
name: Alam, Jan-e
Publisher: name: arXiv
Year: 2023
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: The dynamical correlation of density fluctuation in quark gluon plasma with a critical end point has been investigated within the scope of the Müller-Israel-Stewart theory in the presence of static ultra-high external magnetic field. The dynamic structure factor of the density fluctuation exhibits three Lorentzian peaks in absence of external magnetic field- a central Rayleigh peak and two Brillouin peaks situated symmetrically on the opposite sides of the Rayleigh peak. The spectral structure displays five peaks in presence of the magnetic field due to the coupling of the magnetic field with the hydrodynamic fields in second-order hydrodynamics. The emergence of the extra peaks is due to the asymmetry in the pressure gradient caused by the external magnetic field in the system. Interestingly, it is observed that near the critical end point, all the Brillouin peaks disappear irrespective of the presence or absence of the external magnetic field.
description: Matches published version
title: ADCO, Septième cartulaire de Saint-Étienne de Dijon (1661-1665), Cart. 29 (G 134), 996 folios, f. 0620
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: cartulaire
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: Septième cartulaire de Saint-Étienne de Dijon (1661-1665), Archives départementales de la Côte-d'Or, Cart. 29 (G 134), 996 folios, f. 0620, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Septième cartulaire de Saint-Étienne de Dijon (1661-1665), Archives départementales de la Côte-d'Or, Cart. 29 (G 134), 996 folios, f. 0620, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https://manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
Gas-Phase Thermodynamics of Hydrazine Containing Compounds and Iron Cluster Cations: Guided Ion Beam and Theoretical Investigations
Creators: name: McNary, Christopher Patrick
Publisher: name: University of Utah
Year: 2019
Subjects: Chemistry
Physical chemistry

description: Guided ion beam tandem mass spectrometry (GIBMS) is used to probe the kinetic energy dependences of protonated hydrazine colliding with Xe, proton-bound hydrazine and unsymmetrical 1,1-Dimethylhydrazine (UDMH) clusters and protonated hydrazine and UDMH clustered with water colliding with Ar. The resulting cross sections are analyzed using a statistical model after accounting for internal and kinetic energy distributions, multiple collisions, and kinetic shifts to obtain 0 K bond dissociation energies (BDEs) for the threshold collision induced dissociation (TCID). The dominant dissociation pathways for protonated hydrazine (N2H5+) and its perdeuterated variant (N2D5+) were the observed endothermic non-adiabatic homolytic and heterolytic N-N bond cleavages forming NH 3+(2A2'') + NH2(2A1) and NH2+( 1A1) + NH3(1A 1), respectively. For the proton-bound clusters, the primary dissociation pathways for (N2H4)nH+ where n = (2-4) and (UDMH)2H+ consists of a loss of hydrazine or UMDH unit, followed by the sequential loss an additional hydrazine at higher energies for n > 2. As to be expected, a similar trend is observed for the primary dissociation pathways for (N2H4)H +(H2O)n where n = ( 2 and 3) and (UDMH)H+(H2O) where the losses of a water unit are followed by the sequential loss of a water unit for n ≥ 2. A larger GIBMS is used to probe the association reactions below 1 eV, of Fen+ + CO where n = 4-17. All clusters where n ≥ 4 form the FenCO+ association complex; the resulting cross sections are analyzed using a statistical model after accounting for internal and kinetic energy distributions, multiple collisions, and kinetic shifts to obtain 0 K binding energies for CO binding to iron cluster cations. The probability of this reaction increases with cluster size until the absolute cross sections equal the collision limit for n > 10, with those for n = 12 and 14 exceeding the collision limit. For the largest clusters, the binding energies approach that of an extended Fe(111) surface, whereas the prominent higher energy feature correlates to binding energies for dissociatively chemisorbed C and O on an iron surface.
Two new triterpene glycosides with antiproliferative activities on HepG2 from Phytolacca acinosa fruit fermentation broth
Creators: name: Li, Biao
name: Wang, Yuxing
name: Wang, Changfu
name: Peng, Donghui
name: Su, Huilin
name: Shi, Congjing
name: Liu, Wenlong
name: Kuang, Haixue
name: Wang, Qiuhong
Publisher: name: Taylor & Francis
Year: 2022
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified

description: Two new oleanane-type triterpene glycosides, phytolasides A (1) and B (2), and six known ones (3–8), were isolated from Phytolacca acinosa fruit fermentation broth. Their structures were elucidated by HR-ESI-MS and 1 D- and 2 D-NMR spectroscopic methods. Antiproliferation of compounds 1 and 2 against HepG2 cells was examined by using CCK8 assays.
Emission lines in the atmosphere of the irradiated brown dwarf WD0137-349B
Creators: name: Longstaff, E. S.
name: Casewell, S. L.
name: Wynn, G. A.
name: Maxted, P. F. L.
name: Helling, Ch.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: We present new optical and near-infrared spectra of WD0137-349; a close white dwarf - brown dwarf non-interacting binary system with a period of $\approx$114 minutes. We have confirmed the presence of H$α$ emission and discovered He, Na, Mg, Si, K, Ca, Ti, and Fe emission lines originating from the brown dwarf atmosphere. This is the first brown dwarf atmosphere to have been observed to exhibit metal emission lines as a direct result of intense irradiation. The equivalent widths of many of these lines show a significant difference between the day and night sides of the brown dwarf. This is likely an indication that efficient heat redistribution may not be happening on this object, in agreement with models of hot Jupiter atmospheres. The H$α$ line strength variation shows a strong phase dependency as does the width. We have simulated the Ca II emission lines using a model that includes the brown dwarf Roche geometry and limb darkening and we estimate the mass ratio of the system to be 0.135$\pm$0.004. We also apply a gas-phase equilibrium code using a prescribed drift-phoenix model to examine how the chemical composition of the brown dwarf upper atmosphere would change given an outward temperature increase, and discuss the possibility that this would induce a chromosphere above the brown dwarf atmosphere.
description: 10 pages, 7 figures, 2 tables
title: ADCO, Huitième cartulaire de Saint-Étienne de Dijon (1661-1667), Cart. 31 (G 135), 549 folios, f. 0636
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: cartulaire

description: Huitième cartulaire de Saint-Étienne de Dijon (1661-1667), Archives départementales de la Côte-d'Or, Cart. 31 (G 135), 549 folios, f. 0636, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Huitième cartulaire de Saint-Étienne de Dijon (1661-1667), Archives départementales de la Côte-d'Or, Cart. 31 (G 135), 549 folios, f. 0636, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https://manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
Additional file 8: of Ginkgo bilobaâ s footprint of dynamic Pleistocene history dates back only 390,000Â years ago
Creators: name: Hohmann, Nora
name: Wolf, Eva
name: Rigault, Philippe
name: Wenbin Zhou
name: Kiefer, Markus
name: Yunpeng Zhao
name: Fu, Cheng-Xin
name: Koch, Marcus
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Plant Biology

description: Placement of fossil calibration on the maximum likelihood tree. (PDF 225Â kb)
Neutron skins and neutron stars in the multi-messenger era
Creators: name: Fattoyev, F. J.
name: Piekarewicz, J.
name: Horowitz, C. J.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Nuclear Theory (nucl-th)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: The historical first detection of a binary neutron star merger by the LIGO-Virgo collaboration [B. P. Abbott et al. Phys. Rev. Lett. 119, 161101 (2017)] is providing fundamental new insights into the astrophysical site for the $r$-process and on the nature of dense matter. A set of realistic models of the equation of state (EOS) that yield an accurate description of the properties of finite nuclei, support neutron stars of two solar masses, and provide a Lorentz covariant extrapolation to dense matter are used to confront its predictions against tidal polarizabilities extracted from the gravitational-wave data. Given the sensitivity of the gravitational-wave signal to the underlying EOS, limits on the tidal polarizability inferred from the observation translate into constraints on the neutron-star radius. Based on these constraints, models that predict a stiff symmetry energy, and thus large stellar radii, can be ruled out. Indeed, we deduce an upper limit on the radius of a $1.4\,M_{\odot}$ neutron star of $R_{\star}^{1.4}\!
description: 6 pages, 4 figures, edited figures and the text with a more correct interpretation of the LIGO-Virgo results
Genotype-Phenotype Association Using High Throughput Sequencing Data
Creators: name: Kronenberg, Zev Nachman
Publisher: name: University of Utah
Year: 2019

description: Genotype Phenotype Association (GPA) is a means to identify candidate genes and genetic variants that may contribute to phenotypic variation. Technological advances in DNA sequencing continue to improve the efficiency and accuracy of GPA. Currently, High Throughput Sequencing (HTS) is the preferred method for GPA as it is fast and economical. HTS allows for population-level characterization of genetic variation, required for GPA studies. Despite the potential power of using HTS in GPA studies, there are technical hurdles that must be overcome. For instance, the excessive error rate in HTS data and the sheer size of population-level data can hinder GPA studies. To overcome these challenges, I have written two software programs for the purpose of HTS GPA. The first toolkit, GPAT++, is designed to detect GPA using small genetic variants. Unlike pervious software, GPAT++'s association test models the inherent errors in HTS, preventing many spurious GPA. The second toolkit, Whole Genome Alignment Metrics (WHAM), was designed for GPA using large genetic variants (structural variants). By integrating both structural variant identification and association testing, WHAM can identify shared structural variants associated with a phenotype. Both GPAT++ and WHAM have been successfully applied to real-world GPA studies
An Explanation for Dark Energy from Whittaker Potential Theory
Creators: name: Titleman, Mark
Publisher: name: Zenodo
Year: 2024

description: A recent article found that black holes with posited vacuum energy interior solutions alongside cosmological boundaries have a cosmological coupling constant of k=3, meaning that black holes gain mass proportional to a3 in a parameterization equation within a Robertson Walker cosmology – thus making black holes a cosmological dark energy species (Farrah et al. 2023). The mechanism for this is unknown. Two papers by E. T. Whittaker in 1903 and 1904 showed that all force potential could be understood as resulting from standing waves (static non-local solution) and propagating waves (local solution changing in time). This unification of gravitational and electromagnetic potential has been neglected even though it opens up new mathematical avenues and physical features. The mass-proportionality and preferred direction of the longitudinal waves within the two underlying Whittaker potentials can explain many features of General Relativity (Titleman 2022). They also offer a simple Newtonian explanation for dark energy stemming from Whittaker potential theory – it is produced as longitudinal motion within the Whittaker potentials only when dynamic electromagnetism is separate from time-static gravity in intergalactic space.
Gain Modulation of Cholinergic Neurons in the Medial Septumdiagonal Band of Broca and the Mechanism of Cholinergic Suppression of Hippocampal Ripples
Creators: name: Melonakos, Eric D.
Publisher: name: University of Utah
Year: 2019
Subjects: subject: Neurosciences
subject: FOS: Clinical medicine
subject: Physiology
subject: FOS: Biological sciences

description: Hippocampal network oscillations are important for learning and memory. Theta rhythms are involved in attention, navigation, and memory encoding, whereas sharp wave-ripple complexes (ripples) are involved in memory consolidation. Cholinergic neurons in the medial septum-diagonal band of Broca (MS-DB) influence both types of hippocampal oscillations, promoting theta rhythms and suppressing ripples. They also receive frequency-dependent hyperpolarizing feedback from hippocamposeptal connections, potentially affecting their role as neuromodulators in the septohippocampal circuit. However, little is known about how the integration properties of cholinergic MS-DB neurons change with hyperpolarization. By potentially altering firing behavior in cholinergic neurons, hyperpolarizing feedback from the hippocampal neurons may, in turn, change hippocampal network activity. To study how hyperpolarizing inputs change in membrane integration properties, we used whole-cell patch-clamp recordings targeting genetically labeled, choline acetyltransferase-positive neurons in mouse medial septal brain slices. Hyperpolarization of cholinergic MS-DB neurons resulted in a long-lasting decrease in spike firing rate and input-output gain. Additionally, voltage-clamp measures implicated a slowly inactivating, 4-AP-insensitive, outward K+ conductance. Using a conductance-based model of cholinergic MS-DB neurons, we show that the ability of this conductance to modulate firing rate and gain depends on the expression of an experimentally verified shallow intrinsic spike frequency-voltage relationship. Finally, we show that cholinergic suppression of hippocampal ripples can be achieved through an imbalance in drive, caused by cholinergic modulation, to hippocampal excitatory and inhibitory neurons. Together, these findings show possible mechanisms through which cholinergic MS-DB neurons may both influence and be influenced by hippocampal rhythms.
Radial and Non-Radial Oscillations of Inverted Hybrid Stars
Creators: name: Zhang, Chen
name: Luo, Yudong
name: Li, Hong-bo
name: Shao, Lijing
name: Xu, Renxin
Publisher: name: arXiv
Year: 2023
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We study the radial and non-radial oscillations of Cross stars (CrSs), i.e., stars with a quark matter crust and a hadronic matter core in an inverted order compared to conventional hybrid stars. We draw comparisons of their oscillation modes with those of neutron stars, quark stars, and conventional hybrid stars. We find that the stellar stability analysis from the fundamental mode of radial oscillations, and the $g$, $f$ modes of non-radial oscillations are quite similar to those of conventional hybrid stars. However, due to the inverted stellar structure, the first non-radial $p$ mode of CrSs behaves in an inverted way and sits in a higher frequency domain compared to that of conventional hybrid stars. These results provide a direct way to discriminate CrSs from other types of compact stars via gravitational-wave probes. Specifically, compact stars emitting $g$-mode gravitational waves within the $0.5$-$1$ kHz range should be CrSs or conventional hybrid stars rather than neutron stars or pure quark stars, and a further GW detection of the first $p$ mode above 8 kHz or an identification of a decreasing trend of frequencies versus star masses associated with it will help identify the compact object to be a CrS rather than a conventional hybrid star.
description: 13 pages, 7 figures. Published version
Conversion efficiency and luminosity for gamma-proton colliders based on the LHC-CLIC or LHC-ILC QCD Explorer scheme
Creators: name: Aksakal, H.
name: Ciftci, A. K.
name: Nergiz, Z.
name: Schulte, D.
name: Zimmermann, F.
Publisher: name: arXiv
Year: 2006
Subjects: subject: High Energy Physics - Experiment (hep-ex)
subject: Astrophysics (astro-ph)
subject: Accelerator Physics (physics.acc-ph)
subject: FOS: Physical sciences

description: Gamma-proton collisions allow unprecedented investigations of the low x and high $Q^{2}$ regions in quantum chromodynamics. In this paper, we investigate the luminosity for "ILC"$\times$LHC ($\sqrt{s_{ep}}=1.3$ TeV) and "CLIC"$\times$LHC ($\sqrt{s_{ep}}=1.45$ TeV) based $γp$ colliders. Also we determine the laser properties required for high conversion efficiency.
description: 16, 6 figures