cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1 of Development and validation of a clinical risk model to predict the hospital mortality in ventilated patients with acute respiratory distress syndrome: a population-based study
Creators: name: Ye, Weiyan
name: Li, Rujian
name: Liang, Hanwen
name: Huang, Yongbo
name: Xu, Yonghao
name: Li, Yuchong
name: Ou, Limin
name: Mao, Pu
name: Liu, Xiaoqing
name: Li, Yimin
Publisher: name: figshare
Year: 2022
Subjects: Medicine
Biotechnology
Biological Sciences not elsewhere classified
Marine Biology
Cancer
Science Policy

description: Additional file 1. Table S1. Vital signs and Laboratory findings within the first 24 hours of ICU admission among survivors and non-survivors in training cohort. Table S2. Vital signs, laboratory findings and ventilator settings within the first 24 hours of ventilation among survivors and non-survivors in training cohort. Table S3. Characteristics of the internal validation cohort comparing survived vs non-survived patients. Table S4. Characteristics of the external validation cohort comparing survived vs non-survived patients. Figure S1. The detailed process of data extraction. Figure S2. Feature selection using the least absolute shrinkage and selection operator (LASSO) binary logistic regression model. Figure S3. The ROC curves of our model validated in cohort of direct ARDS and indirect ARDS. Figure S4. The ROC curves of our model validated in cohort of transferred and non-transferred.
The implementation of the essential use concept from a chemical and psychological standpoint
Creators: name: Figuière, Romain
name: Aggarwal, Rahul
name: Suffill, Ellise
Publisher: name: Zenodo
Year: 2025

description: ZeroPM webinar held on the 26th February 2025 called The implementation of the essential use concept from a chemical and psychological standpoint. 

The recording on the webinar can be found on the ZeroPM youtube channel.
Nghệ thuật “vừa đánh, vừa đàm” trong cuộc kháng chiến chống Mỹ, cứu nước
Creators: name: Bui, Ky
Publisher: name: figshare
Year: 2024
Subjects: classificationCode: 430301
subject: Asian history
classificationCode: 480705
subject: Military law and justice

description: A link to have reference on Vietnamese fight against the United States
Structure Stability and Electronic Property for Alkaline-Earth Metals Induced Si(111)-3x2 Surfaces
Creators: name: Chai, Jun-Shuai
name: Li, Zhen-Zhen
name: Xu, Lifang
name: Wang, Jian-Tao
Publisher: name: arXiv
Year: 2018
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Structural stability and electronic properties of alkaline-earth metals (Ca, Sr, Ba) induced Si(111)-3x2 surfaces have been comprehensively studied by means of ab initio calculations. Adsorption energy and charge density difference calculations show the high structural stability due to the strong chemical bonding. Analysis of electronic band structures and band-decomposed charge density distributions indicates that the third valence band is deriving from top Si and metal atoms, while the top most two valence bands are deriving from the bulk silicon. These results suggest a larger surface band gap of 1.65-1.68 eV, which is good consistent with the recent experimental finding for Sr/Si(111)-3x2 surface. These results reveal a natural explanation for the relevant experimental observation and stimulate further experimental and theoretical exploration on the surface science.
description: 7 pages , 4 figures
Additional file 3 of Prevalence, aetiologies and prognosis of the symptom cough in primary care: a systematic review and meta-analysis
Creators: name: Bergmann, Milena
name: Haasenritter, Jörg
name: Beidatsch, Dominik
name: Schwarm, Sonja
name: Hörner, Kaja
name: Bösner, Stefan
name: Grevenrath, Paula
name: Schmidt, Laura
name: Viniol, Annika
name: Donner-Banzhoff, Norbert
name: Becker, Annette
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 3. Meta-analysis: Prevalence / incidence of cough in African, Asian and South American countries.
Substructure recovery by 3D Discrete Wavelet Transforms
Creators: name: Pagliaro, A.
name: Antonuccio-Delogu, V.
name: Becciani, U.
name: Gambera, M.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present and discuss a method to identify substructures in combined angular-redshift samples of galaxies within Clusters. The method relies on the use of Discrete Wavelet Transform (hereafter DWT) and has already been applied to the analysis of the Coma cluster (Gambera et al. 1997). The main new ingredient of our method with respect to previous studies lies in the fact that we make use of a 3D data set rather than a 2D. We test the method on mock cluster catalogs with spatially localized substructures and on a N-body simulation. Our main conclusion is that our method is able to identify the existing substructures provided that: a) the subclumps are detached in part or all of the phase space, b) one has a statistically significant number of redshifts, increasing as the distance decreases due to redshift distortions; c) one knows {\it a priori} the scale on which substructures are to be expected. We have found that to allow an accurate recovery we must have both a significant number of galaxies ($\approx 200$ for clusters at z$\geq 0.4$ or about 800 at z$\leq$ 0.4) and a limiting magnitude for completeness $m_B=16$. The only true limitation to our method seems to be the necessity of knowing {\it a priori} the scale on which the substructure is to be found. This is an intrinsic drawback of the method and no improvement in numerical codes based on this technique could make up for it.
description: Accepted for publication in MNRAS. 7 pages, 2 figures
Additional file 1: of Evolutionary stability of topologically associating domains is associated with conserved gene regulation
Creators: name: Krefting, Jan
name: Andrade-Navarro, Miguel
name: Ibn-Salem, Jonas
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Figure S1. Breakpoint identification accuracy as compared to gene synteny. Considered are adjacent pairs of human genes with one-to-one orthologs and intergenic distance below a size threshold. (A) Positive predicted value as the fraction of non-syntenic gene pairs with breakpoint from all considered gene pairs (syntenic and non-syntenic) with breakpoint. (B) False positive rate as the percent of syntenic gene pairs with breakpoint from the sum of syntenic pairs with breakpoint and non-syntenic gene pairs without breakpoint. (PDF 21 kb)
Turbo muscorum Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Trochida
Turbinidae
Turbo
Turbo muscorum

description: Turbo muscorum [spec. nov.]
T. testa turrita obtusa pellucida: anfractibus secundis, apertura edentula.
List. angl. 121. t. 2. f. 6.
Habitat in Europae muscosis; terrestris.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 767, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
The Large Sky Area Multi-Object Fibre Spectroscopic Telescope (LAMOST) Quasar Survey: Quasar Properties from Data Release Two and Three
Creators: name: Dong, X. Y.
name: Wu, Xue-Bing
name: Ai, Y. L.
name: Yang, J. Y.
name: Yang, Q.
name: Wang, F.
name: Zhang, Y. X.
name: Lou, A. L.
name: Xu, H.
name: Yuan, H. L.
name: Zhang, J. N.
name: Wang, M. X.
name: Wang, L. L.
name: Li, Y. B.
name: Zuo, F.
name: Hou, W.
name: Guo, Y. X.
name: Kong, X.
name: Chen, X. Y.
name: Wu, Y.
name: Yang, H. F.
name: Yang, M.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: This is the second installment for the Large Sky Area Multi-Object Fibre Spectroscopic Telescope (LAMOST) Quasar Survey, which includes quasars observed from September 2013 to June 2015. There are 9024 confirmed quasars in DR2 and 10911 in DR3. After cross-match with the SDSS quasar catalogs and NED, 12126 quasars are discovered independently. Among them 2225 quasars were released by SDSS DR12 QSO catalogue in 2014 after we finalised the survey candidates. 1801 sources were identified by SDSS DR14 as QSOs. The remaining 8100 quasars are considered as newly founded, and among them 6887 quasars can be given reliable emission line measurements and the estimated black hole masses. Quasars found in LAMOST are mostly located at low-to-moderate redshifts, with a mean value of 1.5. The highest redshift observed in DR2 and DR3 is 5. We applied emission line measurements to H$α$, H$β$, Mg{\sc ii} and C{\sc iv}. We deduced the monochromatic continuum luminosities using photometry data, and estimated the virial black hole masses for the newly discovered quasars. Results are compiled into a quasar catalog, which will be available online.
description: 41 pages, 13 figures, 2 electronic tables available upon inquiry, accepted by AJ
title: Verzeichnis der Doktoren und Dissertationen der Universität Ingolstadt-Landshut-München 1; 1975
title: 1472 - 1970
titleType: Subtitle
Creators: name: ,
Publisher: name: Universitätsbibliothek der Ludwig-Maximilians-Universität München
Year: 1975

description: Textfreie Seiten wurden entfernt.
Quark contribution to the reggeon-reggeon-gluon vertex in QCD
Creators: name: Fadin, V. S.
name: Fiore, R.
name: Quartarolo, A.
Publisher: name: arXiv
Year: 1994
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The quark loop contribution to the reggeon-reggeon-gluon vertex is calculated in QCD, where the reggeon is the reggeized gluon. Compared with the vertex in the Born approximation, this contribution exhibits a new spin structure as well as the gluon loop one. A remarkable but not complete cancellation between gluon and quark contributions to this new spin structure takes place for the case of three massless quark flavours.
description: 19 pages + 2 figures(appended as a postscript file), Latex
An Investigation of intra-cluster light evolution using cosmological hydro-dynamical simulations
Creators: name: Tang, Lin
name: Lin, WeiPeng
name: Cui, Weiguang
name: Kang, Xi
name: Wang, Yang
name: Contini, E.
name: Yu, Yu
Publisher: name: arXiv
Year: 2018
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: The intra-cluster light (ICL) in observations is usually identified through the surface brightness limit method. In this paper, for the first time we produce the mock images of galaxy groups and clusters using a cosmological hydro- dynamical simulation, to investigate the ICL fraction and focus on its dependence on observational parameters, e.g., the surface brightness limit (SBL), the effects of cosmological redshift dimming, point spread function and CCD pixel size. Detailed analyses suggest that the width of point spread function has a significant effect on the measured ICL fraction, while the relatively small pixel size shows almost no influence. It is found that the measured ICL fraction depends strongly on the SBL. At a fixed SBL and redshift, the measured ICL fraction decreases with increasing halo mass, while with a much faint SBL, it does not depend on halo mass at low redshifts. In our work, the measured ICL fraction shows clear dependence on the cosmological redshift dimming effect. It is found that there are more mass locked in ICL component than light, suggesting that the use of a constant mass-to-light ratio at high surface brightness levels will lead to an underestimate of ICL mass. Furthermore, it is found that the radial profile of ICL shows a characteristic radius which is almost independent of halo mass. The current measurement of ICL from observations has a large dispersion due to different methods, and we emphasize the importance of using the same definition when observational results are compared with the theoretical predictions.
description: 17 pages, 8 figures, 1 table; accepted for publication in ApJ
Additional file 9: of Dysregulation and prognostic potential of 5-methylcytosine (5mC), 5-hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC), and 5-carboxylcytosine (5caC) levels in prostate cancer
Creators: name: Storebjerg, Tine
name: Strand, Siri
name: Høyer, Søren
name: Anne-Sofie Lynnerup
name: Borre, Michael
name: Ørntoft, Torben
name: Sørensen, Karina
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Hematology

description: Table S1C. Clinical characteristics for PC patients represented on the TMA. Data for RP patients for whom a 5fC score could be evaluated in malignant cores. Eight PC specimens had unknown ERG status. (DOCX 15 kb)
The complex radio spectrum of 3C130
Creators: name: Hardcastle, M. J.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: I present four-frequency radio observations of the wide-angle tail radio galaxy 3C130. By a technique of simulated observations, I assess the systematic errors in the data due to the varying uv plane coverage in the different observations used. Using spectral tomography I show that, at least in the southern plume, the source can be represented by a two-component model consisting of a flat-spectrum core and steep-spectrum sheath, as recently found in other FRI sources. In addition, there is a strong difference in the high-frequency spectra of the northern and southern plumes. I discuss the implications of these observations for the source's jet dynamics and particle acceleration, and discuss models of the class of WATs as a whole.
description: 10 pages, 8 figures, to appear in A&A (uses aa.cls)
Development of Integration-Type Silicon-On-Insulator Monolithic Pixel Detectors by Using a Float Zone Silicon
Creators: name: Mitsui, S.
name: Arai, Y.
name: Miyoshi, T.
name: Takeda, A.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Instrumentation and Detectors (physics.ins-det)
subject: FOS: Physical sciences

description: In this paper, we describe the development of monolithic pixel detectors by using a Silicon-on-Insulator (SOI) technology for X-ray and charged particle applications. The detectors are based on a 0.2 μm CMOS fully depleted SOI process (Lapis Semiconductor Co., Ltd). The SOI wafer consists of a thick high-resistivity substrate for sensing and a thin low resistivity Si layer for CMOS circuits. We developed the integration-type SOI pixel detector, INTPIX4 mainly for X-ray imaging; it is made of a Float Zone (FZ) or Czochralski (Cz) silicon wafer. Since 2005, Cz SOI detectors were used initially. After 2011, FZ SOI detectors were successfully fabricated. In this paper, we state recent progresses and test results of the SOI monolithic pixel detector using a FZ silicon and compare them with the results obtained using the Cz detector.
Infrared Properties of the Hot Gauge Theory after Symmetry Breaking
Creators: name: Kalashnikov, O. K.
Publisher: name: arXiv
Year: 1994
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: It is shown that the fictitious infrared pole is eliminated from the hot gauge theory which acquires a new vacuum after the global gauge symmetry spontaneously breaking. The nonzero W-condensate is generated and leads to the screening of the chromomagnetic forces through the scenario with the standard magnetic mass.
description: 12 pages, LaTeX, Yukawa Institute Preprint YITP/K-1071 (April 1994)
Turbo auriscalpium Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Trochida
Turbinidae
Turbo
Turbo auriscalpium

description: Turbo auriscalpium [spec. nov.]
T. testa turrita alba laevissima, apertura porrecta planiuscula concava obtusa.
Argenv. conch. t. 32. f. 19?
Habitat in M. Mediterraneo. F. Logie.
Testa subulata, lactea, glaberrima, 7 s. 8 spirarum. Apertura dilatata auriscalpium referens; Labro porrecto, obtuso, concavo, marginato.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 767, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
Additional file 4 of Prevalence, aetiologies and prognosis of the symptom cough in primary care: a systematic review and meta-analysis
Creators: name: Bergmann, Milena
name: Haasenritter, Jörg
name: Beidatsch, Dominik
name: Schwarm, Sonja
name: Hörner, Kaja
name: Bösner, Stefan
name: Grevenrath, Paula
name: Schmidt, Laura
name: Viniol, Annika
name: Donner-Banzhoff, Norbert
name: Becker, Annette
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 4. Aetiologies of subacute and chronic cough.
Spin transport across antiferromagnets induced by the spin Seebeck effect
Creators: name: Cramer, Joel
name: Ritzmann, Ulrike
name: Dong, Bo-Wen
name: Jaiswal, Samridh
name: Qiu, Zhiyong
name: Saitoh, Eiji
name: Nowak, Ulrich
name: Kläui, Mathias
Publisher: name: arXiv
Year: 2018
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: For prospective spintronics devices based on the propagation of pure spin currents, antiferromagnets are an interesting class of materials that potentially entail a number of advantages as compared to ferromagnets. Here, we present a detailed theoretical study of magnonic spin current transport in ferromagnetic-antiferromagnetic multilayers by using atomistic spin dynamics simulations. The relevant length scales of magnonic spin transport in antiferromagnets are determined. We demonstrate the transfer of angular momentum from a ferromagnet into an antiferromagnet due to the excitation of only one magnon branch in the antiferromagnet. As an experimental system, we ascertain the transport across an antiferromagnet in YIG$|$Ir$_{20}$Mn$_{80}|$Pt heterostructures. We determine the spin transport signals for spin currents generated in the YIG by the spin Seebeck effect and compare to measurements of the spin Hall magnetoresistance in the heterostructure stack. By means of temperature-dependent and thickness-dependent measurements, we deduce conclusions on the spin transport mechanism across IrMn and furthermore correlate it to its paramagnetic-antiferromagnetic phase transition.
description: 10 pages, 6 figures
Additional file 8: of Dysregulation and prognostic potential of 5-methylcytosine (5mC), 5-hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC), and 5-carboxylcytosine (5caC) levels in prostate cancer
Creators: name: Storebjerg, Tine
name: Strand, Siri
name: Høyer, Søren
name: Anne-Sofie Lynnerup
name: Borre, Michael
name: Ørntoft, Torben
name: Sørensen, Karina
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Hematology

description: Table S1B. Clinical characteristics for PC patients represented on the TMA. Data for RP patients for whom a 5hmC score could be evaluated in malignant cores. (DOCX 15 kb)
Keldysh-Rutherford model for attoclock
Creators: name: Bray, Alexander W.
name: Eckart, Sebastian
name: Kheifets, Anatoli S.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Atomic Physics (physics.atom-ph)
subject: FOS: Physical sciences

description: We demonstrate a clear similarity between attoclock offset angles and Rutherford scattering angles taking the Keldysh tunnelling width as the impact parameter and the vector potential of the driving pulse as the asymptotic velocity. This simple model is tested against the solution of the time-dependent Schrödinger equation using hydrogenic and screened (Yukawa) potentials of equal binding energy. We observe a smooth transition from a hydrogenic to 'hard-zero' intensity dependence of the offset angle with variation of the Yukawa screening parameter. Additionally we make comparison with the attoclock offset angles for various noble gases obtained with the classical-trajectory Monte Carlo method. In all cases we find a close correspondence between the model predictions and numerical calculations. This suggests a largely Coulombic origin of the attoclock offset angle and casts further doubt on its interpretation in terms of a finite tunnelling time.
Additional file 3 of Associations of visceral adipose tissue with bone mineral density and fracture: observational and Mendelian randomization studies
Creators: name: Hu, Jianying
name: Zhao, Manying
name: Lin, Chenhao
name: Sun, Zhonghan
name: Chen, Guo-Chong
name: Mei, Zhendong
name: Zheng, Yan
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: Mathematical Sciences not elsewhere classified
subject: Hematology

description: Additional file 3: Method 1. The selection of instrumental variables in MR analyses.
A photometric catalogue of galaxies in the cluster Abell 496
Creators: name: Slezak, Eric
name: Durret, Florence
name: Guibert, Jean
name: Lobo, Catarina
Publisher: name: arXiv
Year: 1999
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present two catalogues of galaxies in the direction of the rich cluster Abell 496. The first one includes 3,879 galaxies located in a region of roughly 1.3 degrees from the cluster centre. It has been obtained from a list of more than 35,000 galaxy candidates detected by scanning part of a Schmidt photographic plate taken in the b_J band. Positions are very accurate in this catalogue but magnitudes are not. This led us to perform CCD imaging observations in the V and R bands to calibrate these photographic magnitudes. A second catalogue gives a list of galaxies with CCD magnitudes in the V (239 galaxies) and R (610 galaxies) bands for a much smaller region in the centre of the cluster. These two catalogues will be combined with a redshift catalogue of 466 galaxies (Durret et al. 1999) to investigate the cluster properties at optical wavelengths (Durret et al. in preparation), as a complement to previous X-ray studies by a member of our group (Pislar 1998).
description: Accepted for publication in Astronomy & Astrophysics, Supplement Series
Additional file 2: of Board certification and urbanâ rural migration of physicians in Japan
Creators: name: Koike, Soichi
name: Matsumoto, Masatoshi
name: Kawaguchi, Hideaki
name: Ide, Hiroo
name: Atarashi, Hidenao
name: Kotani, Kazuhiko
name: Yasunaga, Hideo
Publisher: name: figshare
Year: 2018
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Cancer
subject: Science Policy

description: Odds of migrating to more rural areas for newly certified physicians working in second tertile areas in 2012 (sub-analysis of the individual specialties). (PDF 49 kb)
Turbo politus Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Trochida
Turbinidae
Turbo
Turbo politus

description: Turbo politus [spec. nov.]
T. testa turrita imperforata glaberrima, apertura ovata.
Habitat in M. Mediterraneo.
Testa Gr. Hordei magnitudine, alibssima, opaca nec pellucida, nitidissima, anfractibus linea excavata tenui interstinctis.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 767, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
Semi-analytical computation of Laplacian Green functions in three-dimensional domains with disconnected spherical boundaries
Creators: name: Grebenkov, D. S.
name: Traytak, Sergey D.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences

description: We apply the generalized method of separation of variables (GMSV) to solve boundary value problems for the Laplace operator in three-dimensional domains with disconnected spherical boundaries (i.e., an arbitrary configuration of non-overlapping partially reactive spherical sinks or obstacles). We consider both exterior and interior problems and all most common boundary conditions: Dirichlet, Neumann, Robin, and conjugate one. Using the translational addition theorems for solid harmonics to switch between the local spherical coordinates, we obtain a semi-analytical expression of the Green function as a linear combination of partial solutions whose coefficients are fixed by boundary conditions. Although the numerical computation of the coefficients involves series truncation and matrix inversion, the use of the solid harmonics as basis functions naturally adapted to the intrinsic symmetries of the problem makes the GMSV particularly efficient, especially for exterior problems. The obtained Green function is the key ingredient to solve boundary value problems and to determine various characteristics of stationary diffusion such as reaction rate, escape probability, harmonic measure, residence time, and mean first passage time, to name but a few. The relevant aspects of the numerical implementation and potential applications in chemical physics, heat transfer, electrostatics, and hydrodynamics are discussed.
Additional file 1 of GRIDSS2: comprehensive characterisation of somatic structural variation using single breakend variants and structural variant phasing
Creators: name: Cameron, Daniel L.
name: Baber, Jonathan
name: Shale, Charles
name: Valle-Inclan, Jose Espejo
name: Besselink, Nicolle
name: van Hoeck, Arne
name: Janssen, Roel
name: Cuppen, Edwin
name: Priestley, Peter
name: Papenfuss, Anthony T.
Publisher: name: figshare
Year: 2021
Subjects: subject: Biophysics
subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Additional file 1. Fig.S1-S4. Fig. S1 COLO829 results with/without PON filter. Fig. S2 PCAWG/GRIDSS, and PURPLE/PCAWG SV/CNV consistency. Fig. S3 PCAWG single breakend annotations. Fig. S4 Phasability and LINX classification for Hartwig and PCAWG.
On the Non-Gaussianity Observed in the COBE-DMR Sky Maps
Creators: name: Banday, A. J.
name: Zaroubi, S.
name: Gorski, K. M.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: In this paper we pursue the origin of the non-Gaussianity determined by a bispectrum analysis of the COBE-DMR 4-year sky maps. The robustness of the statistic is demonstrated by the rebinning of the data into 12 coordinate systems. By computing the bispectrum statistic as a function of various data partitions - by channel, frequency, and time interval, we show that the observed non-Gaussian signal is driven by the 53 GHz data. This frequency dependence strongly rejects the hypothesis that the signal is cosmological in origin. A jack-knife analysis of the coadded 53 and 90 GHz sky maps reveals those sky pixels to which the bispectrum statistic is particularly sensitive. We find that by removing data from the 53 GHz sky maps for periods of time during which a known systematic effect perturbs the 31 GHz channels, the amplitudes of the bispectrum coefficients become completely consistent with that expected for a Gaussian sky. We conclude that the non-Gaussian signal detected by the normalised bispectrum statistic in the publicly available DMR sky maps is due to a systematic artifact. The impact of removing the affected data on estimates of the normalisation of simple models of cosmological anisotropy is negligible.
description: 14 pages, plus 8 Postscript and 3 GIF figures. LaTeX2e document using AASTeX v5.0 macros. Revised version accepted for publication in the Astrophysical Journal: small changes to the text, minor modifications to figures 1 and 6
Additional file 1: of Board certification and urbanâ rural migration of physicians in Japan
Creators: name: Koike, Soichi
name: Matsumoto, Masatoshi
name: Kawaguchi, Hideaki
name: Ide, Hiroo
name: Atarashi, Hidenao
name: Kotani, Kazuhiko
name: Yasunaga, Hideo
Publisher: name: figshare
Year: 2018
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: Odds of migrating to more urban areas for newly certified physicians working in first tertile areas in 2012 (sub-analysis of the individual specialties). (PDF 50 kb)
Helix Linnaeus, 1758, gen. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Bryozoa
Gastropoda
Stylommatophora
Helicidae
Helix

description: Helix [gen. nov.]
Animal Limax.
Testa univalvis, spiralis, subdiaphana, fragilis.
Apertura coarctata, intus lunata s. subrotunda: segmento circuli demto.
* Ancipites, testa longitudinaliter utrinque angulata.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 768, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
Composite Polytrope Models of Molecular Clouds. I. Theory
Creators: name: Curry, Charles L.
name: McKee, Christopher F.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We construct spherical, hydrostatic models of dense molecular cores and Bok globules consisting of two distinct, spatially separate gas components: a central, isothermal region surrounded by a negative-index, polytropic envelope. The clouds are supported against their own self-gravity by a combination of thermal, mean magnetic, and turbulent wave pressure. The latter two are included by allowing for locally adiabatic, non-isentropic pressure components. Such models are meant to represent, in a schematic manner, the velocity and density structure of cores and globules, as inferred from molecular line and dust continuum observations. We show by explicit construction that it is possible to have dense cores comparable to the Jeans mass embedded in stable clouds of much larger mass. In a subsequent paper, we show that composite polytropes on the verge of gravitational instability can reproduce the observed velocity and density structure of cores and globules under a variety of physical conditions.
description: 24 pages, 24 Postscript figures. Submitted to ApJ
Additional file 3 of GRIDSS2: comprehensive characterisation of somatic structural variation using single breakend variants and structural variant phasing
Creators: name: Cameron, Daniel L.
name: Baber, Jonathan
name: Shale, Charles
name: Valle-Inclan, Jose Espejo
name: Besselink, Nicolle
name: van Hoeck, Arne
name: Janssen, Roel
name: Cuppen, Edwin
name: Priestley, Peter
name: Papenfuss, Anthony T.
Publisher: name: figshare
Year: 2021
Subjects: subject: Biophysics
subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Additional file 3. Review history.
Formation of the Bielectron in a 2D System due to Spin-Orbit Interaction and Image Forces
Creators: name: Mahmoodian, M. M.
name: Chaplik, A. V.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: It is shown that two electrons located in a quantum well near a metal electrode attract each other due to the spin-orbit interaction (SOI) of the Bychkov-Rashba type and the electrostatic image forces. Using the example of a simple model, it is shown that, with quite attainable values of the characteristic parameters of the system, the effective attraction caused by SOI prevails over the Coulomb repulsion, and the formation of a bielectron becomes possible.
description: 2 pages, 1 figure
Helix scarabaeus Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Bryozoa
Gastropoda
Stylommatophora
Helicidae
Helix
Helix scarabaeus

description: Helix scarabaeus [spec. nov.]
H. testa ovata subancipiti, apertura dentata.
List. conch. 4. s. 5. c. 5. t. 1. f. 1, 2.
Bonan. recr. 3. t. 385.
Rumph. mus. 91. t. 27. f. I. Cochlea imbrium.
Pet. gaz. t. 4. f. 10.
Gvalt. test. t. 4. f. S.
Argenv. conch. t. 12. f. T.
Klein. ostr. t. 1. f. 23.
Habitat in Asiae montibus.
* * Carinatae anfractibus margine acuto.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 768, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
Age Estimates for Galaxies in Groups
Creators: name: Forbes, Duncan A.
name: Terlevich, Alejandro I.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We discuss recent developments on the age and metallicity distribution for early type galaxies in different environments.
description: 4 pages, Latex, 2 figures, submitted to IAU 174
Additional file 6: of Oil type and temperature dependent biodegradation dynamics - Combining chemical and microbial community data through multivariate analysis
Creators: name: Deni Ribicic
name: McFarlin, Kelly
name: Netzer, Roman
name: Brakstad, Odd
name: Winkler, Anika
name: Throne-Holst, Mimmi
name: StĂ¸Rseth, Trond
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Figure S3. PC2 loadings for PCA analysis of microbial community dynamics (Fig. 4). Only top 30 loadings and corresponding taxa are presented here for readability. (PDF 48Â kb)
Luminescence of BaBrI and SrBrI single crystals doped with Eu2+
Creators: name: Shalaev, A. A.
name: Shendrik, R.
name: Myasnikova, A.
name: Bogdanov, A.
name: Rusakov, A.
name: Vasilkovskyi, A.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The crystal growth procedure and luminescence properties of pure and Eu$^{2+}$-doped BaBrI and SrBrI crystals are reported. Emission and excitation spectra were recorded under ultraviolet and vacuum ultraviolet excitations. The energy of the first Eu$^{2+}$ 4f-5d transition and SrBrI band gap are obtained. The electronic structure calculations were performed within GW approximation as implemented in the Vienna Ab Initio Simulation Package. The energy between lowest Eu$^{2+}$ 5d state and the bottom of conduction band are found based on luminescence quenching parameters. The vacuum referred binding energy diagram of lanthanide levels was constructed using the chemical shift model.
Artificial Nonlinearity Generated from Electromagnetic Coupling Meta-molecule
Creators: name: Wen, Yongzheng
name: Zhou, Ji
Publisher: name: arXiv
Year: 2018
Subjects: subject: Optics (physics.optics)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: A purely artificial mechanism for optical nonlinearity is proposed based on a metamaterial route. The mechanism is derived from classical electromagnetic interaction in a meta-molecule consisting of a cut-wire meta-atom nested within a split-ring meta-atom. Induced by the localized magnetic field in the split-ring meta-atom, the magnetic force drives an anharmonic oscillation of free electrons in the cut-wire meta-atom, generating an intrinsically nonlinear electromagnetic response. An explicit physical process of a second-order nonlinear behavior is adequately described, which is perfectly demonstrated with a series of numerical simulations. Instead of "borrowing" from natural nonlinear materials, this novel mechanism of optical nonlinearity is artificially dominated by the meta-molecule geometry and possesses unprecedented design freedom, offering fascinating possibilities to the research and application of nonlinear optics.
description: 13 pages + 10 pages supplement, published in Physical Review Letters
Additional file 2 of Associations of visceral adipose tissue with bone mineral density and fracture: observational and Mendelian randomization studies
Creators: name: Hu, Jianying
name: Zhao, Manying
name: Lin, Chenhao
name: Sun, Zhonghan
name: Chen, Guo-Chong
name: Mei, Zhendong
name: Zheng, Yan
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: Mathematical Sciences not elsewhere classified
subject: Hematology

description: Additional file 2: Fig. 1. The selection of participants. Figure 2. Association of VAT^ with hip fractures risk using restricted cubic splines. Figure 3. Association of VAT^ with vertebrae fractures risk using restricted cubic splines. Figure 4. Association of VAT^ with other fractures risk using restricted cubic splines.
Additional file 1 of Phytochemical, acute toxicity and renal protective appraisal of Ajuga parviflora hydromethanolic leaf extract against CCl4 induced renal injury in rats
Creators: name: Burki, Samiullah
name: Burki, Zeba Gul
name: Asghar, Muhammad Arif
name: Ali, Imdad
name: Zafar, Saba
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Molecular Biology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Inorganic Chemistry

description: Additional file 1.
Turbulent Formation of Interstellar Structures and the Connection Between Simulations and Observations
Creators: name: Vázquez-Semadeni, Enrique
Publisher: name: arXiv
Year: 1999
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: I review recent results derived from numerical simulations of the turbulent interstellar medium (ISM), in particular concerning the nature and formation of turbulent clouds, methods for comparing the structure in simulations and observations, and the effects of projection of three-dimensional structures onto two dimensions. Clouds formed as turbulent density fluctuations are probably not confined by thermal pressure, but rather their morphology may be determined by the large-scale velocity field. Also, they may have shorter lifetimes than normally believed, as the large-scale turbulent modes have larger associated velocities than the clouds' internal velocity dispersions. Structural characterization algorithms have started to distinguish the best fitting simulations to a particular observation, and have opened several new questions, such as the nature of the observed line width-size relation and of the relation between the structures seen in channel maps and the true spatial distribution of the density and velocity fields. The velocity field apparently dominates the morphology seen in intensity channel maps, at least in cases when the density field exhibits power spectra steep enough. Furthermore, the selection of scattered fluid parcels along the line of sight (LOS) by their LOS-velocity inherent to the construction of spectroscopic data may introduce spurious small-scale structure in high spectral resolution channel maps.
description: 15 pages, no figures. To appear in the Proceedings of "The Chaotic Universe", Roma/Pescara, Italy, 1-5 Feb. 1999, eds. V. Gurzadyan and L. Bertone. Uses included .cls file
BKT universality class in the presence of correlated disorder
Creators: name: Maccari, Ilaria
name: Benfatto, Lara
name: Castellani, Claudio
Publisher: name: arXiv
Year: 2018
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: The correct detection of the Berezinskii-Kosterlitz-Thouless (BKT) transition in quasi-two-dimensional superconductors still remains a controversial issue. Its main signatures, indeed, are often at odds with the theoretical expectations. In a recent work\cite{me} we have shown that the presence of spatially correlated disorder plays a key role in this sense being it the reason underlying the experimentally-observed smearing of the universal superfluid-density jump. In the present paper, we closely investigate the effects of correlated disorder on the BKT transition, addressing specifically the issue whether it changes or not the BKT universality class.
description: The present paper has already been submitted as Special Issue "Proceedings of the conference SuperFluctuations 2017"
Additional file 7: of Dysregulation and prognostic potential of 5-methylcytosine (5mC), 5-hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC), and 5-carboxylcytosine (5caC) levels in prostate cancer
Creators: name: Storebjerg, Tine
name: Strand, Siri
name: Høyer, Søren
name: Anne-Sofie Lynnerup
name: Borre, Michael
name: Ørntoft, Torben
name: Sørensen, Karina
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Hematology

description: Table S1A. Clinical characteristics for PC patients represented on the TMA. Data for RP patients for whom a 5mC score could be evaluated in malignant cores. Two PC specimens had unknown ERG status. (DOCX 15 kb)
Low-Energy Gamow-Teller Transitions in deformed $N = Z$ odd-odd Nuclei
Creators: name: Morita, Hiroyuki
name: Kanada-En'yo, Yoshiko
Publisher: name: arXiv
Year: 2018
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We have investigated the Gamow-Teller transitions from ${}^{22}\textrm{Ne}$ to ${}^{22}\textrm{Na}$ by applying the isospin projected antisymmetrized molecular dynamics combined with generator coordinate method. We have found that the GT strength from $^AZ(J^πT)={}^{22}\textrm{Ne}(0_1^+1)$ is fragmented into two final states ${}^{22}\textrm{Na}(1_{1,2}^+0)$, which belong to $K=0$ and $K=1$ bands constructed by a prolately deformed $^{20}$Ne core with a $S=1$ proton-neutron ($pn$) pair. Coupling of the intrinsic-spin of the $pn$ pair with the core deformation play an important role in the GT fragmentation. The symmetry breaking in the intrinsic-spin rotation leads to the $SU(4)$-symmetry breaking of the $NN$ pair and causes the GT fragmentation. We have compared the features of the GT transitions with those for ${}^{10}\textrm{Be}\to{}^{10}\textrm{B}$ and discuss the link of the $SU(4)$-symmetry and the GT fragmentation in the deformed systems.
description: 24 pages, 8 figures
Additional file 1 of DNA methylation mediates the effect of cocaine use on HIV severity
Creators: name: Shu, Chang
name: Justice, Amy C.
name: Zhang, Xinyu
name: Wang, Zuoheng
name: Hancock, Dana B.
name: Johnson, Eric O.
name: Xu, Ke
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Cancer
subject: Science Policy
subject: Mental Health
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Additional file 1: Figure S1. Manhattan and quantile-quantile (QQ) plot of persistent cocaine use epigenome-wide association (EWA) (λ = 1.034) and HIV severity EWA (λ = 1.116).
Helix lapicida Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Bryozoa
Gastropoda
Stylommatophora
Helicidae
Helix
Helix lapicida

description: Helix lapicida [spec. nov.]
H. testa carinata umbilicata utrinque convexa, apertura marginata transversali ovata.
List. angl. 126. t. 2. f. 14.
Habitat in Europae rupibus terrestribus; ut Larvae lignum, sic calcem rodens.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 768, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
Additional file 2 of The speciation and adaptation of the polyploids: a case study of the Chinese Isoetes L. diploid-polyploid complex
Creators: name: Dai, Xiaokang
name: Li, Xiang
name: Huang, Yuqian
name: Liu, Xing
Publisher: name: figshare
Year: 2020
Subjects: subject: Molecular Biology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified

description: Additional file 2: Figure S1. Kernel density plots of the six environmental variables for the populations whose maternal contributor are different in the allopolyploid of I. sinensis. I. sinensis (tai) indicates the maternal contributor of the population is I. taiwanensis and I. sinensis (yun) means the maternal contributor of the population is I. yunguiensis. Differentiation between different populations and the results of the nonparametric Kruskal-test are indicated in each plot. The equal sign indicates the lack of significant differences (p ≥ 0.05), while the significant differences are indicated by either higher or lower sign (p < 0.05).