cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Time Variable Faraday Rotation Measures of 3C-273 and 3C-279
Creators: name: Zavala, R. T.
name: Taylor, G. B.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Multifrequency polarimetry with the VLBA confirms the previously reported time-varying Faraday rotation measure (RM) in the quasar 3C-279. Variability in the RM and electric vector position angle (EVPA) of the jet component (C4) is seen making it an unreliable absolute EVPA calibrator. 3C-273 is also shown to vary its RM structure on 1.5 year time-scales. Variation in the RM properties of quasars may result from a Faraday screen which changes on time-scales of a few years, or from the motion of jet components which sample spatial variations in the screen. A new component emerging from the core of 3C-279 appears to be starting to sample such a spatial variation. Future monitoring of this component and its RM properties is suggested as a diagnostic of the narrow line region in 3C-279. We also present a new method of EVPA calibration using the VLA Monitoring Program.
description: Accepted to ApJ Letters. 12 pages, 5 figures
Additional file 2 of Holobiont nitrogen control and its potential for eutrophication resistance in an obligate photosymbiotic jellyfish
Creators: name: Röthig, Till
name: Puntin, Giulia
name: Wong, Jane C. Y.
name: Burian, Alfred
name: McLeod, Wendy
name: Baker, David M.
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Ecology
subject: Plant Biology

description: Additional file 1: Figure S1. Effects of menthol bleaching on C. xamachana. (a) Photosynthetic efficiency throughout menthol exposure (day 1-4) and bleaching process. n = 12; Imaging-PAM (Walz, Germany); Fo: dark-adapted minimal fluorescence yields; Fm: dark-adapted maximal fluorescence yield; Fv/Fm: maximum quantum yield. (b) Response of bell diameter (BD) and wet weight (WW) to bleaching (mean, n = 12). (c) Visualization of photosynthetic efficiency (i.e. Fo, Fm, and Fv/Fm). Figure S2. Relationship between wet weight (WW) and bell diameter (BD) in (a) symbiotic (n = 35) [WWsymbiotic = 8.540 -0.494*BD + 0.009*BD2] and (b) aposymbiotic C. xamachana (n = 12) [WWaposymbiotic = -1.440 + 0.100*BD]. Different colours indicate the number of days after start of the four-day menthol bleaching. Dashed vertical lines indicate minimum and maximum BD of medusae employed in the pulse-chase experiment. Figure S3. Net primary production (Pn) and host carbon enrichment. Host fraction enrichment expressed as AP13C light-incubated medusae (SymL) from all incubations (pulse, chase 3h and chase 6h) (n = 15).
Wigner crystal of a two-dimensional electron gas with a strong spin-orbit interaction
Creators: name: Silvestrov, P. G.
name: Entin-Wohlman, O.
Publisher: name: Freie Universität Berlin
Year: 2014
Subjects: subject: 500 Naturwissenschaften und Mathematik::530 Physik

description: The Wigner-crystal phase of two-dimensional electrons interacting via the Coulomb repulsion and subject to a strong Rashba spin-orbit coupling is investigated. For low enough electronic densities the spin-orbit band splitting can be larger than the zero-point energy of the lattice vibrations. Then the degeneracy of the lower subband results in a spontaneous symmetry breaking of the vibrational ground state. The 60∘ rotational symmetry of the triangular (spin-orbit coupling free) structure is lost, and the unit cell of the new lattice contains two electrons. Breaking the rotational symmetry also leads to a (slight) squeezing of the underlying triangular lattice.
MOESM2 of Internalization and accumulation of model lignin breakdown products in bacteria and fungi
Creators: name: Barnhart-Dailey, Meghan
name: Dongmei Ye
name: Hayes, Dulce
name: Danae Maes
name: Simoes, Casey
name: Appelhans, Leah
name: Carroll-Portillo, Amanda
name: Kent, Michael
name: Timlin, Jerilyn
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 2: Figure S2. A. Representative mass spectra (QToF-MS) for each uptake compound (4-HBA, VA, SA, CA, and GGE) in S. cerevisiae lysates. Integrated peak for internalization experiments is marked with a red arrow. DMSO vehicle control mass spectra are shown at the retention time for each compound of interest for peak comparison. B. Ion counts for each compounds in S. cerevisiae cell lysates from 3 biological replicates. C. on counts for spiked S. cerevisiae lysate with indicated compounds at a concentration of 0.005Â mM. Spikes were used to calculate the relative intracellular concentration in Fig.Â 1 from ion counts in Fig. S2C.
Comparison of statistical post-processing methods for probabilistic NWP forecasts of solar radiation
Creators: name: Bakker, Kilian
name: Whan, Kirien
name: Knap, Wouter
name: Schmeits, Maurice
Publisher: name: arXiv
Year: 2019
Subjects: subject: Applications (stat.AP)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: The increased usage of solar energy places additional importance on forecasts of solar radiation. Solar panel power production is primarily driven by the amount of solar radiation and it is therefore important to have accurate forecasts of solar radiation. Accurate forecasts that also give information on the forecast uncertainties can help users of solar energy to make better solar radiation based decisions related to the stability of the electrical grid. To achieve this, we apply statistical post-processing techniques that determine relationships between observations of global radiation (made within the KNMI network of automatic weather stations in the Netherlands) and forecasts of various meteorological variables from the numerical weather prediction (NWP) model HARMONIE-AROME (HA) and the atmospheric composition model CAMS. Those relationships are used to produce probabilistic forecasts of global radiation. We compare 7 different statistical post-processing methods, consisting of two parametric and five non-parametric methods. We find that all methods are able to generate probabilistic forecasts that improve the raw global radiation forecast from HA according to the root mean squared error (on the median) and the potential economic value. Additionally, we show how important the predictors are in the different regression methods. We also compare the regression methods using various probabilistic scoring metrics, namely the continuous ranked probability skill score, the Brier skill score and reliability diagrams. We find that quantile regression and generalized random forests generally perform best. In (near) clear sky conditions the non-parametric methods have more skill than the parametric ones.
description: https://doi.org/10.1016/j.solener.2019.08.044
MOESM1 of Internalization and accumulation of model lignin breakdown products in bacteria and fungi
Creators: name: Barnhart-Dailey, Meghan
name: Dongmei Ye
name: Hayes, Dulce
name: Danae Maes
name: Simoes, Casey
name: Appelhans, Leah
name: Carroll-Portillo, Amanda
name: Kent, Michael
name: Timlin, Jerilyn
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Additional file 1: Figure S1. A. Representative mass spectra (QToF-MS) for each uptake compound (4-HBA, VA, SA, CA, and GGE) in P. chrysosporium lysates. DMSO vehicle control mass spectra are shown at the retention time for each compound of interest for peak comparison. Red arrows mark the integrated peak for results in B (4 h). B. Ion counts for each compounds in P. chrysosporium cell lysates from 3 biological replicates. Error bars are standard deviation. C. Ion counts for spiked P. chrysosporium lysate with indicated compounds at a concentration of 0.005 or 0.0025 mM. Spikes were used to calculate the relative lysate concentrations in Fig. 1 from ion counts in Fig. S1B. D. Representative mass spectra for protocatechuate (GGE metabolite) in P. chrysosporium lysates at 4 h. DMSO vehicle control mass spectra shown at the same retention time for peak comparison. Black arrows mark the integrated metabolite peak for Fig. 1c.
Untangling the X-ray Emission From the Sa Galaxy NGC1291 With Chandra
Creators: name: Irwin, Jimmy A.
name: Sarazin, Craig L.
name: Bregman, Joel N.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present a Chandra ACIS-S observation of the nearby bulge-dominated Sa galaxy NGC1291. The X-ray emission from the bulge resembles the X-ray emission from a sub-class of elliptical and S0 galaxies with low L_X/L_B luminosity ratios. The X-ray emission is composed of a central point-like nucleus, ~50 point sources that are most likely low mass X-ray binaries (LMXBs), and diffuse gas detectable out to a radius of 120" (5.2 kpc). The diffuse gas has a global temperature of 0.32^{+0.04}_{-0.03} keV and metallicity of 0.06 +/- 0.02 solar, and both quantities marginally decrease with increasing radius. The hot gas fills the hole in the HI distribution, and the softening of the spectrum of the X-ray gas with radius might indicate a thermal coupling of the hot and cold phases of the interstellar medium as previously suggested. The integrated X-ray luminosity of the LMXBs, once normalized by the optical luminosity, is a factor of 1.4 less than in the elliptical galaxy NGC4697 or S0 galaxy NGC1553. The difference in L_{X,stellar}/L_B between the galaxies appears to be because of a lack of very bright sources in NGC1291. No sources above 3 x 10^38 ergs/s were found in NGC1291 when ~7 were expected from scaling from NGC4697 and NGC1553. The cumulative L_{X,stellar}/L_B value including only sources below 1.0 x 10^38 ergs/s is remarkably similar between NGC1291 and NGC4697, if a recent surface brightness fluctuation-determined distance is assumed for NGC4697. If this is a common feature of the LMXB population in early-type systems, it might be used as a distance indicator. Finally, a bright, variable (1.6-3.1 x 10^39 ergs/s) source was detected at the optical center of the galaxy. Its spectrum shows excess soft emission superimposed on a highly absorbed power law component, similar to what has been found in several other low luminosity AGN (ABRIDGED).
description: 13 pages in emulateapj5 style with 11 embedded Postscript figures; minor revisions since last version; accepted by ApJ
Influence of intrauterine administration of Lactobacillus buchneri on reproductive performance and pro-inflammatory endometrial mRNA expression of cows with subclinical endometritis
Creators: name: Peter, S.
name: Gärtner, M. A.
name: Michel, G.
name: Ibrahim, M.
name: Klopfleisch, R.
name: Lübke-Becker, A.
name: Jung, M.
name: Einspanier, R.
name: Gabler, C.
Publisher: name: Freie Universität Berlin
Year: 2018
Subjects: subject: Reproductive disorders
subject: 600 Technik, Medizin, angewandte Wissenschaften::630 Landwirtschaft::630 Landwirtschaft und verwandte Bereiche

description: Potential beneficial effects of lactic acid bacteria on the genital health of cows become of particular interest when considering the importance of an optimal uterine health status for the success of breeding in dairy farming. Therefore, the aim of the present study was to analyse the influence of an intrauterine administration of the Lactobacillus buchneri DSM 32407 on reproductive performance, uterine health status, endometrial mRNA expression of pro-inflammatory factors of cows with signs of subclinical endometritis (SCE). L. buchneri DSM 32407 (n = 56; [LAC]) or a placebo (n = 60; [PLA]) was administered on day 24–30 postpartum. Endometrial cytobrush samples of cows with SCE were taken before the administration and at three following weeks (n = 16 cows each for LAC/SCE and PLA/SCE). A higher proportion of cows of the LAC and LAC/SCE group was pregnant after the first service and median days to conception for cows pregnant on day 200 pp were shorter. Three weeks after the administration, the endometrial mRNA expression of CXCL1/2, CXCL3, CXCR2, IL1B, IL8 and PTPRC was lower in the LAC/SCE group compared with the PLA/SCE group. These findings suggest that the presence of L. buchneri DSM 32407 contributes to a uterine environment that results in a better reproductive performance.
On rotationally driven meridional flows in stars
Creators: name: Garaud, P.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: A quasi-steady state model of the consequences of rotation on the hydrodynamical structure of a stellar radiative zone is derived, by studying in particular the role of centrifugal and baroclinic driving of meridional motions in angular-momentum transport. This nonlinear problem is solved numerically assuming axisymmetry of the system, and within some limits, it is shown that there exist simple analytical solutions. The limit of slow rotation recovers Eddington-Sweet theory, whereas it is shown that in the limit of rapid rotation, the system settles into a geostrophic equilibrium. The behaviour of the system is found to be controlled by one parameter only, linked to the Prantl number, the stratification and the rotation rate of the star.
description: 5 pages, submitted to MNRAS Letters
Tri-partite non-maximally entangled mixed states as a resource for optimum controlled quantum teleportation fidelity
Creators: name: Paulson, K. G.
name: Panigrahi, Prasanta K.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Three-qubit mixed states are used as a channel for controlled quantum teleportation (CQT) of single-qubit states. The connection between different channel parameters to achieve maximum controlled teleportation fidelity is investigated. We show that for a given multipartite entanglement and mixedness, a class of non-maximally entangled mixed $X$ states ($X-$NMEMS) achieves optimum controlled quantum teleportation fidelity, interestingly a class of maximally entangled mixed $X$ states ($X-$MEMS) fails to do so. This demonstrates, for a given spectrum and mixedness, that $X-$MEMS are not sufficient to attain optimum controlled quantum teleportation fidelity, which is in contradiction with the traditional quantum teleportation of single qubits. In addition, we show that biseparable $X-$NMEMS, for a certain range of mixedness, are useful as a resource to attain high controlled quantum teleportation fidelity, which essentially lowers the requirements of quantum channels for CQT.
description: 8 pages, 8 figures
The largest black holes and the most luminous galaxies
Creators: name: Netzer, Hagai
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: The empirical relationship between the broad line region size and the source luminosity in active galactic nuclei (AGNs) is used to obtain black holes (BH) masses for a large number of quasars in three samples. The largests BH masses found exceed 10^{10} Msun and are correlated, almost linearly, with the source luminosity. Such BH masses, when converted to galactic bulge mass and luminosity, indicate masses in excess of 10^{13} Msun and sigma(*) in excess of 700 km/sec. Such massive galaxies have never been observed. The largest BHs reside, almost exclusively, in high redshift quasars. This, and the deduced BH masses, suggest that several scenarios of BH and galaxy formation are inconsistent with the observations. Either the observed size-L relationship in low luminosity AGNs does not extend to very high luminosity or else the M(BH)-M_B(bulge)-sigma(*) correlations observed in the local universe do not reflect the relations of those quantities at the epoch of galaxy formation.
description: 12 pages, 2 figures, one table, submitted to ApJL
Masuria daliensis ASSING 2004
Creators: name: Assing, V.
Publisher: name: Zenodo
Year: 2012
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Staphylinidae
Masuria
Masuria daliensis

description: Masuria daliensis ASSING 2004 (Map 1)
M a t e r i a l e x a m i n e d: China: 3 exs., Yunnan, Dali Bai Auton. Pref., Diancang Shan W Dali, 25°42'N, 100°07'E, 2930 m, 28.V.2007, leg. Schülke (cSch, cAss).
 C o m m e n t: The known distribution of M. daliensis is confined to the environs of Dali, Yunnan (Map 1). The above specimens were collected close to the type locality.
description: Published as part of Assing, V., 2012, On the taxonomy of Masuria. IV. Four new species from China and Nepal, and additional records (Coleoptera: Staphylinidae: Aleocharinae), pp. 1017-1034 in Linzer biologische Beiträge 44 (2) on page 1022, DOI: 10.5281/zenodo.5328692
Star Formation Thresholds in Galactic Disks
Creators: name: Martin, Crystal L.
name: Kennicutt,, Robert C.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We report the first results of a detailed study of the star formation law in a sample of 32 nearby spiral galaxies with well-measured rotation curves, HI and H$_2$ (as traced by CO) surface density profiles, and new \Ha CCD photometry. Our results strongly support the view that the formation of gravitationally bound interstellar clouds regulates the onset of widespread star formation -- at least in the outer regions of galactic disks.
description: Will appear in July 1 ApJ. Abbreviated abstract. Postscript version available at http://www.astro.caltech.edu/~clm/
Additional file 1 of Natural forests in New Zealand – a large terrestrial carbon pool in a national state of equilibrium
Creators: name: Paul, Thomas
name: Kimberley, Mark O.
name: Beets, Peter N.
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Inorganic Chemistry
subject: Plant Biology

description: Additional file 1: Table S1.Description of height estimation method including relevant regression coefficients and estimation of prediction errors and their uncertainties.
Coelogyne geesinkii M. W. Chase & Schuit. 2021, comb. nov.
Creators: name: Chase, Mark W.
name: Gravendeel, Barbara
name: Sulistyo, Bobby P.
name: Wati, Richa Kusuma
name: Schuiteman, André
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Liliopsida
Asparagales
Orchidaceae
Coelogyne
Coelogyne geesinkii

description: Coelogyne geesinkii (J.J.Wood) M.W.Chase & Schuit., comb. nov.
 Basionym: Dendrochilum geesinkii J.J.Wood in J.J.Wood & P.J.Cribb, Check-list Orchids Borneo: 175 (1994).
description: Published as part of Chase, Mark W., Gravendeel, Barbara, Sulistyo, Bobby P., Wati, Richa Kusuma & Schuiteman, André, 2021, Expansion of the orchid genus Coelogyne (Arethuseae; Epidendroideae) to include Bracisepalum, Bulleyia, Chelonistele, Dendrochilum, Dickasonia, Entomophobia, Geesinkorchis, Gynoglottis, Ischnogyne, Nabaluia, Neogyna, Otochilus, Panisea and Pholidota, pp. 94-134 in Phytotaxa 510 (2) on page 111, DOI: 10.11646/phytotaxa.510.2.1, http://zenodo.org/record/5426332
Study of cosmogenic radionuclides in the COSINE-100 NaI(Tl) detectors
Creators: name: de Souza, E. Barbosa
name: Park, B. J.
name: Adhikari, G.
name: Adhikari, P.
name: Carlin, N.
name: Choi, J. J.
name: Choi, S.
name: Djamal, M.
name: Ezeribe, A. C.
name: Ha, C.
name: Hahn, I. S.
name: Jeon, E. J.
name: Jo, J. H.
name: Kang, W. G.
name: Kauer, M.
name: Kim, G. S.
name: Kim, H.
name: Kim, H. J.
name: Kim, K. W.
name: Kim, N. Y.
name: Kim, S. K.
name: Kim, Y. D.
name: Kim, Y. H.
name: Ko, Y. J.
name: Kudryavtsev, V. A.
name: Lee, E. K.
name: Lee, H. S.
name: Lee, J.
name: Lee, J. Y.
name: Lee, M. H.
name: Lee, S. H.
name: Leonard, D. S.
name: Lynch, W. A.
name: Manzato, B. B.
name: Maruyama, R. H.
name: Neal, R. J.
name: Olsen, S. L.
name: Park, H. K.
name: Park, H. S.
name: Park, K. S.
name: Pitta, R. L. C.
name: Prihtiadi, H.
name: Ra, S. J.
name: Rott, C.
name: Shin, K. A.
name: Scarff, A.
name: Spooner, N. J. C.
name: Thompson, W. G.
name: Yang, L.
name: Yu, G. H.
name: Collaboration, COSINE-100
Publisher: name: arXiv
Year: 2019
Subjects: subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Physical sciences

description: COSINE-100 is a direct detection dark matter search experiment that uses a 106 kg array of eight NaI(Tl) crystals that are kept underground at the Yangyang Underground Laboratory to avoid cosmogenic activation of radioisotopes by cosmic rays. Even though the cosmogenic activity is declining with time, there are still significant background rates from the remnant nuclides. In this paper, we report measurements of cosmogenic isotope contaminations with less than one year half-lives that are based on extrapolations of the time dependent activities of their characteristic energy peaks to activity rates at the time the crystals were deployed underground. For longer-lived $^{109}$Cd ($T_{1/2}=1.6$ y) and $^{22}$Na ($T_{1/2}=2.6$ y), we investigate time correlations of characteristic $γ$/X-ray peaks. The inferred sea-level production rates are compared with caluclations based on the ACTIVIA and MENDL-2 model calculations and experimental data. For $^{3}$H, which has a long, 12.3 year half-life, we evaluated the activity levels from the exposure times and determined a cosmogenic activation rate that is consistent with other measurements.
MOESM2 of Identification of key genes involved in myocardial infarction
Creators: name: Linlin Qiu
name: Xueqing Liu
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 2: Table S2. The top 50 significant GO biological processes and all KEGG pathways enriched by the specific genes in recurrent MI.
Additional file 2: of PHF8 upregulation contributes to autophagic degradation of E-cadherin, epithelial-mesenchymal transition and metastasis in hepatocellular carcinoma
Creators: name: Zhou, Wuhua
name: Gong, Li
name: Wu, Qinchuan
name: Xing, Chunyang
name: Wei, Bajin
name: Chen, Tianchi
name: Zhou, Yuan
name: Yin, Shengyong
name: Jiang, Bin
name: Xie, Haiyang
name: Zhou, Lin
name: Zheng, Shusen
Publisher: name: figshare
Year: 2018
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Cancer
subject: Computational Biology

description: Table S2. Details of primary antibodies. (DOCX 15 kb)
A Homological Approach to Belief Propagation and Bethe Approximations
Creators: name: Peltre, Olivier
Publisher: name: arXiv
Year: 2019
Subjects: subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences
subject: 18, 62, 82, 68

description: We introduce a differential complex of local observables given a decomposition of a global set of random variables into subsets. Its boundary operator allows us to define a transport equation equivalent to Belief Propagation. This definition reveals a set of conserved quantities under Belief Propagation and gives new insight on the relationship of its equilibria with the critical points of Bethe free energy.
description: 14 pages, submitted for the 2019 Geometric Science of Information colloquium
Additional file 3 of The impacts of health systems financing fragmentation in low- and middle-income countries: a systematic review protocol
Creators: name: Siqueira, Marina
name: Coube, Maíra
name: Millett, Christopher
name: Rocha, Rudi
name: Hone, Thomas
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 3. Strategy adopted for the search on PubMed.
Epstein-Barr virus-encoded RNAs (EBERs) complement the loss of the herpesvirus telomerase RNA (vTR) in virus-induced tumor formation
Creators: name: Kheimar, Ahmed
name: Kaufer, Benedikt
Publisher: name: Freie Universität Berlin
Year: 2017
Subjects: subject: Herpes virus
subject: Viral pathogenesis
subject: 600 Technik, Medizin, angewandte Wissenschaften::630 Landwirtschaft::630 Landwirtschaft und verwandte Bereiche

description: Marek’s disease virus (MDV) is an alphaherpesvirus that causes fatal lymphomas in chickens and is used as a natural virus-host model for herpesvirus-induced tumorigenesis. MDV encodes a telomerase RNA subunit (vTR) that is crucial for efficient MDV-induced lymphoma formation; however, the mechanism is not completely understood. Similarly, Epstein Barr-virus (EBV) encodes two RNAs (EBER-1 and EBER-2) that are highly expressed in EBV-induced tumor cells, however their role in tumorigenesis remains unclear. Intriguingly, vTR and EBER-1 have interaction partners in common that are highly conserved in humans and chickens. Therefore, we investigated if EBER-1 and/or EBER-2 can complement the loss of vTR in MDV-induced tumor formation. We first deleted vTR (vΔvTR) and replaced it by either EBER-1 or EBER-2 in the very virulent RB-1B strain. Insertion of either EBER-1 or EBER-2 did not affect MDV replication and their expression levels were comparable to vTR in wild type virus. Intriguingly, EBER-2 restored tumor formation of MDV that lacks vTR. EBER-1 partially restored MDV oncogenicity, while tumor formation was severely impaired in chickens infected with vΔvTR. Our data provides the first evidence that EBERs possess tumor-promoting properties in vivo using this natural model for herpesvirustumorigenesis.
Additional file 3 of Healthcare workforce transformation: implementing patient-centered medical home standards in an academic medical center
Creators: name: Gendelman, Rebecca
name: Preis, Heidi
name: Chandran, Latha
name: Blair, Robyn J.
name: Chitkara, Maribeth
name: Pati, Susmita
Publisher: name: figshare
Year: 2021
Subjects: subject: Space Science
subject: Medicine
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 3:
Clumpy outer Galaxy molecular clouds and the steepening of the IMF
Creators: name: Brand, J.
name: Wouterloot, J. G. A.
name: Rudolph, A. L.
name: de Geus, E. J.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We report the results of high-resolution (~0.2 pc) CO(1-0) and CS(2-1) observations of the central regions of three star-forming molecular clouds in the far-outer Galaxy (~16 kpc from the Galactic Center): WB89 85 (Sh 2-127), WB89 380, and WB89 437. We used the BIMA array in combination with IRAM 30-m and NRAO 12-m observations. The GMC's in which the regions are embedded were studied by means of KOSMA 3-m CO(2-1) observations. The properties the CO and CS clumps are analyzed and compared with newly derived results of previously published single-dish measurements of local clouds (OrionB South and Rosette). We find that the slopes of the clump mass distributions (-1.28 and -1.49, for WB89 85 and WB89 380, respectively) are somewhat less steep than found for most local clouds, but similar to those of clouds which have been analyzed with the same clumpfind program. We investigate the clump stability by using the virial theorem, including all possible contributions (gravity, turbulence, magnetic fields, and pressure due to the interclump gas). It appears that under reasonable assumptions a combination of these forces would render most clumps stable. Comparing only gravity and turbulence, we find that in the far-outer Galaxy clouds, these forces are in equilibium (virial parameter alpha~1) for clumps down to the lowest masses found (a few Msol). For clumps in the local clouds alpha~1 only for clumps with masses larger than a few tens of Msol. Thus it appears that in these outer Galaxy clumps gravity is the dominant force down to a much lower mass than in local clouds, implying that gravitational collapse and star formation may occur more readily even in the smallest clumps. Although there are some caveats, due to the inhomogeneity of the data used, this might explain the apparently steeper IMF found in the outer Galaxy.
description: 29 pages, including 9 tables, 21 figures. Accepted for Astron. Astroph
MOESM1 of Healthcare cost comparison analysis of nivolumab in combination with ipilimumab versus nivolumab monotherapy and ipilimumab monotherapy in advanced melanoma
Creators: name: Potluri, Ravi
name: Sandip Ranjan
name: Hitesh Bhandari
name: Johnson, Helen
name: Moshyk, Andriy
name: Srividya Kotapati
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Molecular Biology
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Marine Biology
subject: Science Policy

description: Additional file 1. Basis for inclusion of drug and non-drug resources in the cost comparison analysis.
Coelogyne globigera M. W. Chase & Schuit. 2021, comb. nov.
Creators: name: Chase, Mark W.
name: Gravendeel, Barbara
name: Sulistyo, Bobby P.
name: Wati, Richa Kusuma
name: Schuiteman, André
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Liliopsida
Asparagales
Orchidaceae
Coelogyne
Coelogyne globigera

description: Coelogyne globigera (Ridl.) M.W.Chase & Schuit., comb. nov.
 Basionym: Platyclinis globigera Ridl., J. Linn. Soc., Bot. 31: 266 (1896).
 Homotypic synonyms: Acoridium globigerum (Ridl.) Rolfe, Orchid Rev. 12: 220 (1904). Dendrochilum globigerum (Ridl.) J.J.Sm., Recueil Trav. Bot. Néerl. 1: 64 (1904).
 Heterotypic synonyms: Platyclinis minima Ridl., J. Straits Branch Roy. Asiat. Soc. 49: 30 (1908). Dendrochilum minimum (Ridl.) Merr., J. Straits Branch Roy. Asiat. Soc. 84(Spec. No.): 148 (1921). Platyclinis minor Ridl., J. Straits Branch Roy. Asiat. Soc. 49: 30 (1908). Dendrochilum minus (Ridl.) Merr., J. Straits Branch Roy. Asiat. Soc. 84(Spec. No.): 148 (1921).
 Coelogyne globosa (Blume) Rchb. f. in W.G.Walpers, Ann. Bot. Syst. 6: 236 (1862).
 Basionym: Crinonia globosa Blume, Bijdr. Fl. Ned. Ind.: 339 (1825).
 Homotypic synonym: Pholidota globosa (Blume) Lindl., Gen. Sp. Orchid. Pl.: 37 (1830).
description: Published as part of Chase, Mark W., Gravendeel, Barbara, Sulistyo, Bobby P., Wati, Richa Kusuma & Schuiteman, André, 2021, Expansion of the orchid genus Coelogyne (Arethuseae; Epidendroideae) to include Bracisepalum, Bulleyia, Chelonistele, Dendrochilum, Dickasonia, Entomophobia, Geesinkorchis, Gynoglottis, Ischnogyne, Nabaluia, Neogyna, Otochilus, Panisea and Pholidota, pp. 94-134 in Phytotaxa 510 (2) on page 112, DOI: 10.11646/phytotaxa.510.2.1, http://zenodo.org/record/5426332
BL Lac: A New Ultrahigh-Energy Gamma-Ray Source
Creators: name: Neshpor, Yu. I.
name: Chalenko, N. N.
name: Stepanian, A. A.
name: Kalekin, O. R.
name: Jogolev, N. A.
name: Fomin, V. P.
name: Shitov, V. G.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: The active galactic nucleus BL Lac was observed with the Gt-48 atmospheric Cherenkov detector of the Crimean Astrophysical Observatory from July 23-September 1, 1998, in order to search for ultrahigh-energy gamma-ray (>1 TeV) emission. The object was in the field of view of the detector for more than 24 hours. The source was detected with a high level of confidence (7.2 sigma), with a flux equal to (2.1+/-0.4)x10^{-11} photons cm^{-2}s^{-1}.
description: 7 pages, 4 figures
Additional file 2 of The impacts of health systems financing fragmentation in low- and middle-income countries: a systematic review protocol
Creators: name: Siqueira, Marina
name: Coube, Maíra
name: Millett, Christopher
name: Rocha, Rudi
name: Hone, Thomas
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 2. List of eligible Low-and-Middle Income Countries.
High-resolution airborne imaging DOAS measurements of NO2 above Bucharest during AROMAT
Creators: name: Meier, Andreas Carlos
name: Schonhardt, Anja
name: Bosch, Tim
name: Richter, Andreas
name: Seyler, Andre
name: Ruhtz, Thomas
name: Constantin, Daniel-Eduard
Publisher: name: Freie Universität Berlin
Year: 2017
Subjects: subject: 500 Naturwissenschaften und Mathematik::550 Geowissenschaften, Geologie::551 Geologie, Hydrologie, Meteorologie

description: In this study we report on airborne imaging DOAS measurements of NO2 from two flights performed in Bucharest during the AROMAT campaign (Airborne ROmanian Measurements of Aerosols and Trace gases) in September 2014. These measurements were performed with the Airborne imaging Differential Optical Absorption Spectroscopy (DOAS) instrument for Measurements of Atmospheric Pollution (AirMAP) and provide nearly gapless maps of column densities of NO2 below the aircraft with a high spatial resolution of better than 100 m. The air mass factors, which are needed to convert the measured differential slant column densities (dSCDs) to vertical column densities (VCDs), have a strong dependence on the surface reflectance, which has to be accounted for in the retrieval. This is especially important for measurements above urban areas, where the surface properties vary strongly. As the instrument is not radiometrically calibrated, we have developed a method to derive the surface reflectance from intensities measured by AirMAP. This method is based on radiative transfer calculation with SCIATRAN and a reference area for which the surface reflectance is known. While surface properties are clearly apparent in the NO2 dSCD results, this effect is successfully corrected for in the VCD results. Furthermore, we investigate the influence of aerosols on the retrieval for a variety of aerosol profiles that were measured in the context of the AROMAT campaigns. The results of two research flights are presented, which reveal distinct horizontal distribution patterns and strong spatial gradients of NO2 across the city. Pollution levels range from background values in the outskirts located upwind of the city to about 4 × 1016 molec cm−2 in the polluted city center. Validation against two co-located mobile car-DOAS measurements yields good agreement between the datasets, with correlation coefficients of R = 0.94 and R = 0.85, respectively. Estimations on the NOx emission rate of Bucharest for the two flights yield emission rates of 15.1 ± 9.4 and 13.6 ± 8.4 mol s−1, respectively.
Additional file 2 of Healthcare workforce transformation: implementing patient-centered medical home standards in an academic medical center
Creators: name: Gendelman, Rebecca
name: Preis, Heidi
name: Chandran, Latha
name: Blair, Robyn J.
name: Chitkara, Maribeth
name: Pati, Susmita
Publisher: name: figshare
Year: 2021
Subjects: subject: Space Science
subject: Medicine
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 2:
Masuria martensi PACE 1987
Creators: name: Assing, V.
Publisher: name: Zenodo
Year: 2012
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Staphylinidae
Masuria
Masuria martensi

description: Masuria martensi PACE 1987
M a t e r i a l e x a m i n e d: Nepal: 5 exs., Parbat District, between Deorali and Chitre, 2700 m, 1.-2.V.1995, leg. Martens & Schawaller (SMNS, cAss).
C o m m e n t: The above specimens were collected close to the type locality.
description: Published as part of Assing, V., 2012, On the taxonomy of Masuria. IV. Four new species from China and Nepal, and additional records (Coleoptera: Staphylinidae: Aleocharinae), pp. 1017-1034 in Linzer biologische Beiträge 44 (2) on page 1022, DOI: 10.5281/zenodo.5328692
MOESM11 of Internalization and accumulation of model lignin breakdown products in bacteria and fungi
Creators: name: Barnhart-Dailey, Meghan
name: Dongmei Ye
name: Hayes, Dulce
name: Danae Maes
name: Simoes, Casey
name: Appelhans, Leah
name: Carroll-Portillo, Amanda
name: Kent, Michael
name: Timlin, Jerilyn
Publisher: name: figshare
Year: 2019
Subjects: subject: Biophysics
subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Additional file 11: Figure S11. A. LC/MS standard curve of 4-HBA prepared in methanol at 0.001, 0.005, 0.01, 0.05, 0.1 mM. b. LC/MS standard curve of VA prepared in methanol at 0.001, 0.005, 0.01, 0.05, and 0.1 mM. C. LC/MS standard curve of CA prepared in methanol at 0.001, 0.005, 0.01, 0.05, 0.1, 0.25, 0.5, 0.8, and 1 mM. D. LC/MS standard curve of GGE prepared in methanol at 0.005, 0.01, 0.05, and 0.1 mM. E. LC/MS standard curve of SA prepared in 10% methanol, 90% PBS at 0.01, 0.02, and 0.05 mM.
Kinematic outliers in the LMC: constraints on star-star microlensing
Creators: name: Zhao, HongSheng
name: Ibata, Rodrigo
name: Lewis, Geraint
name: Irwin, Mike
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Although a decade of microlensing searches towards the Large Magellanic Cloud (LMC) has detected 13-25 possible microlensing events, the nature and the location of the lenses, being either halo machos or LMC stars, remains a subject of debate. The star-star lensing models generically predict the existence of a small population (more than about 5 percent of stars with a spatial and kinematic distribution different from the thin, young disc of the LMC. Here we present the results of a large spectroscopic survey of the LMC, consisting of more than 1300 radial velocities measured accurately with the 2dF instrument. In this large sample, no evidence is found for any extraneous population over the expected LMC and Galactic components. Any additional, kinematically distint, population can only be present at less than the 1 percent level. We discuss the significance of this finding for the LMC self-lensing models.
description: MNRAS accepted, to be published 2003. 6pp w/ 10 eps fig, references updated to match proof
Additional file 1 of The impacts of health systems financing fragmentation in low- and middle-income countries: a systematic review protocol
Creators: name: Siqueira, Marina
name: Coube, Maíra
name: Millett, Christopher
name: Rocha, Rudi
name: Hone, Thomas
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 1. PRISMA-P Checklist.
Additional file 4 of A homozygous PIWIL2 frameshift variant affects the formation and maintenance of human-induced pluripotent stem cell-derived spermatogonial stem cells and causes Sertoli cell-only syndrome
Creators: name: Wang, Xiaotong
name: Li, Zili
name: Qu, Mengyuan
name: Xiong, Chengliang
name: Li, Honggang
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 4: Table S1. Primers used in this study; Table S2 Antibodies used in this study; Table S3 Potential pathogenic variants detected in the man with complete SCOS.
Coelogyne glossorhyncha M. W. Chase & Schuit. 2021, comb. nov.
Creators: name: Chase, Mark W.
name: Gravendeel, Barbara
name: Sulistyo, Bobby P.
name: Wati, Richa Kusuma
name: Schuiteman, André
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Liliopsida
Asparagales
Orchidaceae
Coelogyne
Coelogyne glossorhyncha

description: Coelogyne glossorhyncha (Schltr.) M.W.Chase & Schuit., comb. nov.
 Basionym: Dendrochilum glossorhynchum Schltr., Beibl. Bot. Jahrb. Syst. 104: 9 (1911).
description: Published as part of Chase, Mark W., Gravendeel, Barbara, Sulistyo, Bobby P., Wati, Richa Kusuma & Schuiteman, André, 2021, Expansion of the orchid genus Coelogyne (Arethuseae; Epidendroideae) to include Bracisepalum, Bulleyia, Chelonistele, Dendrochilum, Dickasonia, Entomophobia, Geesinkorchis, Gynoglottis, Ischnogyne, Nabaluia, Neogyna, Otochilus, Panisea and Pholidota, pp. 94-134 in Phytotaxa 510 (2) on page 112, DOI: 10.11646/phytotaxa.510.2.1, http://zenodo.org/record/5426332
The Early Angular Momentum History of Low Mass Stars: Evidence for a Regulation Mechanism
Creators: name: Rebull, L. M.
name: Wolff, S. C.
name: Strom, S. E.
name: Makidon, R. B.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We examine the early angular momentum history of stars in young clusters via 197 photometric periods in fields flanking the Orion Nebula Cluster (ONC), 81 photometric periods in NGC 2264, and 202 measurements of v sin i in the ONC itself. We show that PMS stars spanning an age range from 0.1 to 3 Myr do not appear to conserve stellar angular momentum as they evolve down their convective tracks, but instead preserve the same range of periods even though they have contracted by about a factor of three. This result seems to require a mechanism that regulates the angular velocities of young stars. We discuss several candidate mechanisms. The most plausible appears to be disk-locking, though most of our stars do not have (I-K) excesses suggestive of disks. However, a decisive test of this hypothesis requires a more sensitive diagnostic than the (I-K) excesses used here.
description: 32 pages, 11 figures, accepted to AJ
Additional file 1 of Healthcare workforce transformation: implementing patient-centered medical home standards in an academic medical center
Creators: name: Gendelman, Rebecca
name: Preis, Heidi
name: Chandran, Latha
name: Blair, Robyn J.
name: Chitkara, Maribeth
name: Pati, Susmita
Publisher: name: figshare
Year: 2021
Subjects: subject: Space Science
subject: Medicine
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 1:
Role of Fermi surface for the pressure-tuned nematic transition in the BaFe$_2$As$_2$ family
Creators: name: Gati, Elena
name: Xiang, Li
name: Bud'ko, Sergey L.
name: Canfield, Paul C.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: The tetragonal-to-orthorhombic phase transition at $T_s$, which precedes the antiferromagnetic phase transition at $T_N$ in many iron-based superconductors, is considered as one of the manifestations of electronic \textit{nematic} order. By constructing temperature-pressure phase diagrams of pure and Co-doped BaFe$_2$As$_2$, we study the relation of $T_s$ and $T_N$ under pressure $p$. Our data disclose two qualitatively different regimes in which $ΔT\,=\,T_s-T_N$ either increases or decreases with $p$. We provide experimental evidence that the transition between the two regimes may be associated with sudden changes of the Fermi surface topology. Therefore, our results not only support the electronic origin of the structural order, but also emphasize the importance of details of the Fermi surface for the evolution of nematic order under pressure.
description: 6 pages, 4 figures (+ Appendix)
On the two types of steady hard X-ray states of GRS 1915+105
Creators: name: Trudolyubov, Sergey P.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Using the data of 5 years of RXTE observations we investigate the X-ray spectral and timing properties of GRS 1915+105 during the hard steady states. According to the results of our simultaneous X-ray spectral and timing analysis the behavior the source during the hard steady states can be reduced to a couple of major distinct types. i) Type I states: The dominant hard component of the energy spectrum has characteristic quasi- exponential cut-off at 50-120 keV. The broad-band power density spectrum of the source shows significant high frequency noise component with a cut-off at 60-80 Hz. ii) Type II states: The hard spectral component has a break in its slope at ~12-20 keV. The high frequency part of the power density spectrum fades quickly lacking significant variability at frequencies higher than ~30 Hz. These two types of the X-ray hard states are also clearly distinguished by their properties in the radio band: while during the type I observations the source tends to be 'radio-quiet', the type II observations are characterized by high level of radio flux ('plateau' radio states). In this work we demonstrate aforementioned differences using the data of 12 representative hard steady state observations. We conclude that the difference between these two types can be probably explained in terms of different structure of the accretion flow in the immediate vicinity of the compact object due to presence of relativistic outflow of matter.
description: 16 pages, including 3 figures, submitted to Astrophysical Journal Letters