cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
title: "High-Tech ersetzt kein Herz"
Creators: name: Wolf, Aurelia
Year: 2009

description: Die Diplomarbeit widmet sich dem Thema der Aufklärung bei pränatalen Untersuchungen. Dies geschieht vorwiegend durch den Blick auf die betroffenen ÄrztInnen und deren „Aufklärungsdilemma“. Dieses Aufklärungsdilemma kommt vor allem in der direkten ÄrztIn-Patientinnen-Interaktion zum Vorschein. Die Interaktion ist zum einen von den möglichen Wünschen und Vorstellungen der Mütter, als auch von den jeweiligen menschlichen und kommunikativen Fähigkeiten der behandelnden ÄrztInnen abhängig. Die Wurzeln des Dilemmas liegen jedoch tiefer und sind in den gesellschaftlichen Strukturen verankert. Es handelt sich hierbei um die vorherrschenden ethischen Vorstellungen, den gesetzlichen Rahmen, welcher die Aufklärungspflicht regelt, und um die Wahrnehmung und den Umgang von Menschen mit Behinderungen.
Supplemental Material, sj-pdf-1-ojs-10.1177_23259671221126475 - Superior Bone Microarchitecture in Anatomic Versus Nonanatomic Fibular Drill Tunnels for Reconstruction of the Posterolateral Corner of the Knee
Creators: name: Stürznickel, Julian
name: Schmidt, Felix N.
name: Schweizer, Conradin
name: Mushumba, Herbert
name: Krause, Matthias
name: Püschel, Klaus
name: Rolvien, Tim
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 110314 Orthopaedics
subject: FOS: Clinical medicine
subject: 110604 Sports Medicine
subject: FOS: Health sciences

description: Supplemental Material, sj-pdf-1-ojs-10.1177_23259671221126475 for Superior Bone Microarchitecture in Anatomic Versus Nonanatomic Fibular Drill Tunnels for Reconstruction of the Posterolateral Corner of the Knee by Julian Stürznickel, Felix N. Schmidt, Conradin Schweizer, Herbert Mushumba, Matthias Krause, Klaus Püschel and Tim Rolvien in Orthopaedic Journal of Sports Medicine
Additional file 7 of An integrated data analysis reveals distribution, hosts, and pathogen diversity of Haemaphysalis concinna
Creators: name: Liu, Jing
name: Han, Xiao-Yu
name: Ye, Run-Ze
name: Xu, Qing
name: Wang, Xiao-Yang
name: Li, Ze-Hui
name: Sun, Yi
name: Song, Ke
name: Wang, Bao-Yu
name: Wang, Shan-Shan
name: Liu, Jin-Yue
name: Zhao, Lin
name: Cao, Wu-Chun
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified

description: Additional file 7: Figure S4. Migration routes of birds in Europe susceptible to parasitism by Haemaphysalis concinna. Figure S5. Migratory birds in China primarily exhibit three migration routes.
Additional file 8 of An integrated data analysis reveals distribution, hosts, and pathogen diversity of Haemaphysalis concinna
Creators: name: Liu, Jing
name: Han, Xiao-Yu
name: Ye, Run-Ze
name: Xu, Qing
name: Wang, Xiao-Yang
name: Li, Ze-Hui
name: Sun, Yi
name: Song, Ke
name: Wang, Bao-Yu
name: Wang, Shan-Shan
name: Liu, Jin-Yue
name: Zhao, Lin
name: Cao, Wu-Chun
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified

description: Additional file 8: Figure S6. The results of Maxent model for Haemaphysalis concinna. Figure S7. Jackknife plots of Maxent model for Haemaphysalis concinna prediction. Table S3. Relative contributions of the environmental and meteorological variables to the Maxent model. Figure S8. Response curves of environmental variables to probability of Haemaphysalis concinna presence
D4.2: Interim Report On The Work On Representation Archiving And Provision Of Object-Based Audio
Creators: name: Silzle, Andreas
name: Färber, Nikolaus
name: Meier, Michael
name: Herberger, Tilman
name: Mason, Andrew
name: Baume, Chris
name: Firth, Matt
name: Paradis, Matt
Publisher: name: Zenodo
Year: 2017
Subjects: Formats
BW64
ADM
NMOS
UMCP
MPEG-H
DASH
IP-Studio
Sequoia
iOS app
browsers

description: This deliverable describes the progress on representation, archiving and provision of object-based audio. It builds on D4.1 “Requirements for representation, archiving and provision of object-based audio”. It lists the formats which are selected for ORPHEUS and describes the interim status of the implementation of these formats. On the production side, formats like BW64, ADM, NMOS, UMCP are used and explained. BW64 is also used for archiving. For provision or distribution MPEG-H and AAC + ADM metadata are selected. Both solutions use MPEG-DASH for streaming.

This Deliverables also serves as documentation for milestone MS12 “Initial implementation and documentation of a format for provision of objected-based audio” which has been achieved on 31/03/17.
Additional file 9 of An integrated data analysis reveals distribution, hosts, and pathogen diversity of Haemaphysalis concinna
Creators: name: Liu, Jing
name: Han, Xiao-Yu
name: Ye, Run-Ze
name: Xu, Qing
name: Wang, Xiao-Yang
name: Li, Ze-Hui
name: Sun, Yi
name: Song, Ke
name: Wang, Bao-Yu
name: Wang, Shan-Shan
name: Liu, Jin-Yue
name: Zhao, Lin
name: Cao, Wu-Chun
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified

description: Additional file 9: Figure S9. Prevalence of Haemaphysalis concinna-associated microbes. Figure S10. Meta-analysis of the prevalence of each Haemaphysalis concinna-associated microbes.
title: Ð¤Ð¸Ð·Ð¸ÐºÐ¾-Ñ Ð¸Ð¼Ð¸ÑÐµÑÐºÐ¸Ðµ Ð¿ÑÐ¾ÑÐµÑÑÑ Ð¿ÑÐ¸ ÑÑÐµÐ½Ð¸Ð¸
title: ÑÑÐµÐ±Ð½Ð¾Ðµ Ð¿Ð¾ÑÐ¾Ð±Ð¸Ðµ
titleType: Subtitle
Creators: name: Ð¦Ð²ÐµÑÐºÐ¾Ð²Ð°, ÐÐ°Ð»Ð¸Ð½Ð°
name: Ð¡ÐºÐ¾ÑÐ½Ð¸ÐºÐ¾Ð²Ð°, ÐÐ°ÑÐ³Ð°ÑÐ¸ÑÐ°
name: ÐÐ²Ð°Ð½Ð¾Ð²Ð°, ÐÐ°Ð»Ð¸Ð½Ð°
name: ÐÑÐµÐºÐ¸, ÐÐ»ÐµÐºÑÐ°Ð½Ð´Ñ
Publisher: name: ÐÐÐÐÐ¢ÐÐ¥-ÐÐ ÐÐ¡Ð¡
Year: 2024
Subjects: ÐÐ°ÑÐ¸Ð½Ñ

description: Ð£ÑÐµÐ±Ð½Ð¾Ðµ Ð¿Ð¾ÑÐ¾Ð±Ð¸Ðµ ÑÐ¾Ð¾ÑÐ²ÐµÑÑÑÐ²ÑÐµÑ ÑÐµÐ´ÐµÑÐ°Ð»ÑÐ½Ð¾Ð¹ Ð´Ð¸ÑÑÐ¸Ð¿Ð»Ð¸Ð½Ðµ Â«Ð¤Ð¸Ð·Ð¸ÐºÐ¾-ÑÐ¸Ð¼Ð¸ÑÐµÑÐºÐ¸Ðµ Ð¿ÑÐ¾ÑÐµÑÑÑ Ð¿ÑÐ¸ ÑÑÐµÐ½Ð¸Ð¸ Ð¸ Ð¸Ð·Ð½Ð°ÑÐ¸Ð²Ð°Ð½Ð¸Ð¸Â» Ð³Ð¾ÑÑÐ´Ð°ÑÑÑÐ²ÐµÐ½Ð½Ð¾Ð³Ð¾ Ð¾Ð±ÑÐ°Ð·Ð¾Ð²Ð°ÑÐµÐ»ÑÐ½Ð¾Ð³Ð¾ ÑÑÐ°Ð½Ð´Ð°ÑÑÐ° Ð¿Ð¾ Ð½Ð°Ð¿ÑÐ°Ð²Ð»ÐµÐ½Ð¸Ñ Ð¿Ð¾Ð´Ð³Ð¾ÑÐ¾Ð²ÐºÐ¸ 15.04.01 Â«ÐÐ°ÑÐ¸Ð½Ð¾ÑÑÑÐ¾ÐµÐ½Ð¸ÐµÂ». Ð¦ÐµÐ»Ñ Ð´Ð°Ð½Ð½Ð¾Ð³Ð¾ ÑÑÐµÐ±Ð½Ð¾Ð³Ð¾ Ð¿Ð¾ÑÐ¾Ð±Ð¸Ñ â Ð¿Ð¾Ð¼Ð¾ÑÑ ÑÑÑÐ´ÐµÐ½ÑÐ°Ð¼ Ð¸Ð·ÑÑÐ¸ÑÑ ÐºÑÑÑ Â«Ð¤Ð¸Ð·Ð¸ÐºÐ¾-ÑÐ¸Ð¼Ð¸ÑÐµÑÐºÐ¸Ðµ Ð¿ÑÐ¾ÑÐµÑÑÑ Ð¿ÑÐ¸ ÑÑÐµÐ½Ð¸Ð¸ Ð¸ Ð¸Ð·Ð½Ð°ÑÐ¸Ð²Ð°Ð½Ð¸Ð¸Â». ÐÐ±ÑÑÐ¶Ð´Ð°ÑÑÑÑ ÑÐµÐ¾ÑÐµÑÐ¸ÑÐµÑÐºÐ¸Ðµ Ð¸ Ð¿ÑÐ¸ÐºÐ»Ð°Ð´Ð½ÑÐµ Ð°ÑÐ¿ÐµÐºÑÑ ÑÑÐ¸Ð±Ð¾Ð»Ð¾Ð³Ð¸Ð¸ ÐºÐ°Ðº Ð½Ð°ÑÐºÐ¸ Ð¾ Ð·Ð°ÐºÐ¾Ð½Ð¾Ð¼ÐµÑÐ½Ð¾ÑÑÑÑ ÑÑÐµÐ½Ð¸Ñ. ÐÑÐ¾Ð±Ð¾Ðµ Ð²Ð½Ð¸Ð¼Ð°Ð½Ð¸Ðµ ÑÐ´ÐµÐ»ÐµÐ½Ð¾ ÑÐ¸Ð·Ð¸ÐºÐ¾-ÑÐ¸Ð¼Ð¸ÑÐµÑÐºÐ¸Ð¼ Ð¿ÑÐ¾ÑÐµÑÑÐ°Ð¼, ÑÐ¾Ð¿ÑÐ¾Ð²Ð¾Ð¶Ð´Ð°ÑÑÐ¸Ð¼ ÑÑÐµÐ½Ð¸Ðµ. ÐÑÐ¸Ð²Ð¾Ð´ÑÑÑÑ ÑÐ¸Ð¿Ð¾Ð²ÑÐµ ÐºÐ¾Ð½ÑÑÐ¾Ð»ÑÐ½ÑÐµ Ð²Ð¾Ð¿ÑÐ¾ÑÑ Ð´Ð»Ñ Ð¿ÑÐ¾Ð²ÐµÑÐºÐ¸ Ð¾ÑÐ½Ð¾Ð²Ð½Ð¾Ð³Ð¾ Ð¼Ð°ÑÐµÑÐ¸Ð°Ð»Ð°. Ð£ÑÐµÐ±Ð½Ð¾Ðµ Ð¿Ð¾ÑÐ¾Ð±Ð¸Ðµ Ð¿ÑÐµÐ´Ð½Ð°Ð·Ð½Ð°ÑÐµÐ½Ð¾ Ð´Ð»Ñ Ð°ÑÐ´Ð¸ÑÐ¾ÑÐ½ÑÑ Ð·Ð°Ð½ÑÑÐ¸Ð¹ Ð¸ ÑÐ°Ð¼Ð¾ÑÑÐ¾ÑÑÐµÐ»ÑÐ½Ð¾Ð¹ ÑÐ°Ð±Ð¾ÑÑ Ð¿Ð¾ ÑÐºÐ°Ð·Ð°Ð½Ð½Ð¾Ð¹ Ð´Ð¸ÑÑÐ¸Ð¿Ð»Ð¸Ð½Ðµ. ÐÐ¾ÑÐ¾Ð±Ð¸Ðµ Ð¼Ð¾Ð¶ÐµÑ Ð±ÑÑÑ Ð¸ÑÐ¿Ð¾Ð»ÑÐ·Ð¾Ð²Ð°Ð½Ð¾ Ð´Ð»Ñ ÑÐ¸ÑÐ¾ÐºÐ¾Ð³Ð¾ ÐºÑÑÐ³Ð° ÑÑÑÐ´ÐµÐ½ÑÐ¾Ð², Ð¾Ð±ÑÑÐ°ÑÑÐ¸ÑÑÑ Ð¿Ð¾ Ð½Ð°Ð¿ÑÐ°Ð²Ð»ÐµÐ½Ð¸Ñ Ð¿Ð¾Ð´Ð³Ð¾ÑÐ¾Ð²ÐºÐ¸ 15.04.01 Â«ÐÐ°ÑÐ¸Ð½Ð¾ÑÑÑÐ¾ÐµÐ½Ð¸ÐµÂ».
sj-pdf-1-jsn-10.1177_10598405221129553 - Supplemental material for Interdisciplinary Collaboration to Care for Students Diagnosed with PANDAS: An Education and Referral Intervention
Creators: name: Boyd, Tiffany M.
name: Moyer, Susan M.
name: Lambert, Dawn
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 111099 Nursing not elsewhere classified
subject: FOS: Health sciences
subject: 111403 Paediatrics
subject: FOS: Clinical medicine
subject: Education

description: Supplemental material, sj-pdf-1-jsn-10.1177_10598405221129553 for Interdisciplinary Collaboration to Care for Students Diagnosed with PANDAS: An Education and Referral Intervention by Tiffany M. Boyd, Susan M. Moyer and Dawn Lambert in The Journal of School Nursing
GraSAME: Injecting Token-Level Structural Information to Pretrained Language Models via Graph-guided Self-Attention Mechanism
Creators: name: Yuan, Shuzhou
name: Färber, Michael
Publisher: name: Association for Computational Linguistics (ACL)
Year: 2024

description: Pretrained Language Models (PLMs) benefit from external knowledge stored in graph structures for various downstream tasks. However, bridging the modality gap between graph structures and text remains a significant challenge. Traditional methods like linearizing graphs for PLMs lose vital graph connectivity, whereas Graph Neural Networks (GNNs) require cumbersome processes for integration into PLMs. In this work, we propose a novel graph-guided self-attention mechanism, GraSAME. GraSAME seamlessly incorporates token-level structural information into PLMs without necessitating additional alignment or concatenation efforts. As an end-to-end, lightweight multimodal module, GraSAME follows a multi-task learning strategy and effectively bridges the gap between graph and textual modalities, facilitating dynamic interactions between GNNs and PLMs. Our experiments on the graph-to-text generation task demonstrate that GraSAME outperforms baseline models and achieves results comparable to state-of-the-art (SOTA) models on WebNLG datasets. Furthermore, compared to SOTA models, GraSAME eliminates the need for extra pre-training tasks to adjust graph inputs and reduces the number of trainable parameters by over 100 million.
Additional file 1 of Improvements in lung function following vitamin C supplementation to pregnant smokers are associated with buccal DNA methylation at 5 years of age
Creators: name: Shorey-Kendrick, Lyndsey E.
name: McEvoy, Cindy T.
name: Milner, Kristin
name: Harris, Julia
name: Brownsberger, Julie
name: Tepper, Robert S.
name: Park, Byung
name: Gao, Lina
name: Vu, Annette
name: Morris, Cynthia D.
name: Spindel, Eliot R.
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Mental Health

description: Additional file 1: Fig. S1 Consort diagram and EWAS overview. Out of 252 pregnant smokers randomized to vitamin C or placebo as part of our VCSIP RCT, 243 offspring were delivered and 213 were re-consented into follow-up through 5 years of age. Of 192 subjects with technically acceptable spirometry at 5 years of age, 158 had sufficient quality buccal DNA for epigenome-wide methylation analysis (EWAS; n= 80 placebo, 78 vitamin C). We first performed an EWAS for vitamin C vs. placebo, followed by EWAS for FEF25-75 and current wheeze. Fig. S2 Example of scatterplot for inspection of genotype effect. We inferred that methylation was genotype dependent if there was a methylation pattern characteristic of polymorphic sites (e.g. β-values fall into two or three levels, with gaps in between, when plotted on a continuous scale of 0–1). Fig. S3 Persistent association of PSORS1C3 with FEF25-75. Among CpGs persistent over time, we highlight the correlation of one CpG (cg11811828) measured at birth versus at 5 years of age (A) and the correlation between beta values and FEF25-75 at 5 years of age (B).Fig. S4 Longitudinal plots for COL6A5. In panel A, we show the smoothed mean and confidence interval for each treatment for cg08963132 over time. In panel B, we show the correlation between raw beta values measured at birth and beta values measured at 5 years of age. Supplemental Methods.
Revising the USNVC using quantitative methods and plot data: A case study using longleaf pine (Pinus palustris) vegetation of the southeastern United States
Creators: name: Peet, Robert K.
name: Palmquist, Kyle A.
name: Schafale, Michael
Publisher: name: F1000Research
Year: 2017

description: Vegetation description and classification are critical for both theoretical and applied science, including conservation planning and ecological restoration. In 2008, the Federal Geographic Data Committee established an US standard for vegetation classification, which mandates that Associations and Alliances recognized in the US National Vegetation Classification (USNVC) be based on quantitative analysis of publicly-available plot data. However, most types have not been verified using quantitative data, and few descriptions include the FGDC-mandated detailed summary tables. This project was undertaken to revise the longleaf pine (Pinus palustris) USNVC Groups (G154, G009, G596, G190) using a consistent quantitative framework to document vegetation-environment relationships and provide an example of revision, review, and dissemination of quantitatively-defined vegetation types. We used 891 vegetation plots that capture the full range of edaphic conditions (xeric, sandy to mesic, silty soils) that longleaf pine woodlands occupy in NC, SC, GA, and FL. Hierarchical clustering with flexible β using abundance and presence-absence data in combination was used to identify and circumscribe vegetation types. Misclassified plots were reassigned using silhouette width and the optpart function. To identify diagnostic taxa associated with each type as well as environmental variables that influence species richness and composition, we used indicator species analysis and non-metric multidimensional scaling. Hierarchical clustering divided plots first according to geography rather than environmental context and three major geographic bins emerged from our analysis: the Coastal Plain of North Carolina and northern South Carolina, central South Carolina to the Florida border, and Florida and immediately adjacent Georgia. We recognize and describe the floristics, diagnostic characters and environmental setting of 30 Associations in the first group, 32 Associations in the second, and 27 Associations in Florida. Key environmental variables that explain differences in species richness and composition across vegetation types were soil texture, soil moisture, base cation availability (particularly calcium), and proximity to the coast. Sixty-two of our 89 vegetation types map onto previously recognized USNVC concepts, while 17 types are newly described. Because so little of the longleaf pine ecosystem remains, providing substantial documentation of vegetation units for use as targets for management and restoration is critical. In addition, this work provides a model framework for how to conduct a quantitatively-based classification of a large vegetation unit (Group in the USNVC) with the goal of revising a pre-existing classification hierarchy.
Niche partitioning in a periphyton metacommunity peaks at intermediate species richness in mid-sized rivers
Creators: name: Fuß, Thomas
Publisher: name: figshare
Year: 2024
Subjects: classificationCode: 310302
subject: Community ecology (excl. invasive species ecology)
classificationCode: 310304
subject: Freshwater ecology

description: Datasets from the paper "Niche partitioning in a periphyton metacommunity peaks at intermediate species richness in mid-sized rivers" published in Ecology.See the "Metadata_nichepart_Fuß.pdf" file for a short description of the datasets. More detailed informations can be found in the main text and supplementary information of the paper.
Parsing the relative effects of habitat amount, fragmentation, and habitat edge on parasitism rates in an experimental landscape system
Creators: name: With, Kimberly A.
name: Pavuk, Daniel M.
Publisher: name: F1000Research
Year: 2017

description: Background/Question/Methods
Parasitism rates are expected to increase in fragmented landscapes, but it is unclear how much of this is due to a reduction in habitat area versus increased fragmentation per se, as both increase the amount of edge habitat on the landscape. Habitat fragmentation, a landscape-wide property, is typically only studied at the patch scale, further complicating efforts to tease apart the relative effects of patch vs. landscape effects on parasitism rates. To address this, we used a novel experimental design in which landscape patterns were created from the “top down” by independently adjusting habitat amount and degree of fragmentation at the scale of the landscape, rather than from the “bottom up” by adjusting patch properties to create fragmented landscapes. Our experimental system consisted of 36 plots (16 m x 16 m) consisting of different amounts (10-80%) of red clover arrayed as either a clumped or fragmented distribution. We sampled pea-aphid populations within 10% of the habitat cells at random within each plot, and quantified parasitism rates as a fraction of aphids parasitized (aphid “mummies”).  Clover cells were classified as either "habitat interior" if completely surrounded by other clover cells or as "habitat edge" if one or more edges of the clover cell was adjacent to the bareground matrix.

Results/Conclusions
Parasitism on aphids averaged about 40% in this experimental landscape system (0.39 + 0.087 SD, n = 36 plots).  Overall, habitat amount had the greatest effect on parasitism rates.  The greatest difference occurred between 20% and 50% habitat, in which the rate of parasitism increased by 21.4% (from 0.35 to 0.42).  Although neither fragmentation nor edge type had a significant effect on parasitism by themselves, habitat amount interacted significantly with both fragmentation and edge type to influence parasitism rates.  Parasitism rates were initially higher in fragmented landscapes <=40% habitat (significantly so at 40% habitat), but then became higher in clumped landscapes >=60% habitat (significantly so at 80% habitat).  Similarly, parasitism rates were initially higher in edge cells <=40% habitat (although only significant at 40%), but became significantly higher in interior cells at 60% habitat.  The transition from higher parasitism in fragmented habitat or edge cells to higher parasitism in clumped habitat and interior cells occurred at intermediate habitat levels (40-60%), coinciding with a shift from edge-dominated to interior-dominated habitat within these landscapes.  Most of the habitat edge cells came from fragmented landscapes (75%), whereas most of the habitat interior cells came from clumped landscapes (68%).  Thus, parasitism rates reflect a major shift in landscape structure at intermediate levels of habitat disturbance.
Supplemental Material - Psychometrics of the Physical Resilience Scale in Older Adults Living with Dementia: Proxy Responses
Creators: name: Resnick, Barbara
name: Boltz, Marie
name: Galik, Elizabeth
name: Kuzmik, Ashley
name: Ellis, Jeanette
name: Wells, Chris
Publisher: name: SAGE Journals
Year: 2022
Subjects: subject: 110306 Endocrinology
subject: FOS: Clinical medicine
subject: 110308 Geriatrics and Gerontology
subject: 111799 Public Health and Health Services not elsewhere classified
subject: FOS: Health sciences

description: Supplemental Material for Psychometrics of the Physical Resilience Scale in Older Adults Living with Dementia: Proxy Responses by Barbara Resnick, PhD, CRNP, Marie Boltz, PhD, CRNP, Elizabeth Galik, PhD, Ashley Kuzmik, PhD, Jeanette Ellis, MA, and Chris Wells, PT, PhD, CCS, ATC, FCCM in Journal of Aging and Health.
Finding Circumbinary Planets: A Transit Detection Framework for TESS Eclipsing Binaries
Creators: name: Davies, Benjamin D. R.
name: Brown, David J. A.
name: Gill, Samuel
Publisher: name: Zenodo
Year: 2024
Subjects: Exoplanets
Exoplanet detection methods
Eclipsing binary stars
Transit photometry

description: The detection of the first circumbinary planet (CBP) was an exciting breakthrough in exoplanetary science, but the number of known CBPs remains small. Only 14 transiting CBPs have been discovered, making the study of their formation, evolution, and bulk properties difficult. Here, I present a framework for detecting transiting CBP candidates from TESS light curves of eclipsing binaries. I outline how the data is processed, including masking eclipses and detrending, as well as the procedure for detecting individual candidate transit events. In conclusion, I consider how potential candidates can be vetted and discuss follow-up observations necessary for their confirmation.
title: Ð¡Ð¾Ð²ÐµÑÑÐµÐ½ÑÑÐ²Ð¾Ð²Ð°Ð½Ð¸Ðµ ÑÐ¸ÑÑÐµÐ¼ ÑÐµÐ¿Ð°ÑÐ°ÑÐ¸Ð¸ Ð²Ð»Ð°Ð³Ð¸ Ð²Ð¾ Ð²Ð»Ð°Ð¶Ð½Ð¾Ð¿Ð°ÑÐ¾Ð²ÑÑ ÑÑÑÐ±Ð¸Ð½Ð°Ñ
title: ÑÐ¿ÐµÑÐ¸Ð°Ð»ÑÐ½Ð¾ÑÑÑ 2.4.7. Ð¢ÑÑÐ±Ð¾Ð¼Ð°ÑÐ¸Ð½Ñ Ð¸ Ð¿Ð¾ÑÑÐ½ÐµÐ²ÑÐµ Ð´Ð²Ð¸Ð³Ð°ÑÐµÐ»Ð¸
titleType: Subtitle
Creators: name: Ð¥ÐµÐ¼Ð°ÑÐ¸ ÐÐ°ÑÑÐ´
Publisher: name: Ð¡Ð°Ð½ÐºÑ-ÐÐµÑÐµÑÐ±ÑÑÐ³ÑÐºÐ¸Ð¹ Ð¿Ð¾Ð»Ð¸ÑÐµÑÐ½Ð¸ÑÐµÑÐºÐ¸Ð¹ ÑÐ½Ð¸Ð²ÐµÑÑÐ¸ÑÐµÑ ÐÐµÑÑÐ° ÐÐµÐ»Ð¸ÐºÐ¾Ð³Ð¾
Year: 2024
Subjects: ÐÐ°ÑÐ¾Ð²ÑÐµ ÑÑÑÐ±Ð¸Ð½Ñ
ÑÐµÐ»ÑÐµÑÐ½Ð°Ñ Ð¿Ð¾Ð²ÐµÑÑ Ð½Ð¾ÑÑÑ
Ð¾ÑÐ°Ð¶Ð´ÐµÐ½Ð¸Ðµ Ð²Ð»Ð°Ð³Ð¸
ÑÐµÐ¿Ð°ÑÐ°ÑÐ¸Ñ Ð²Ð»Ð°Ð³Ð¸
ÑÑÐ¾Ð»ÐºÐ½Ð¾Ð²ÐµÐ½Ð¸Ðµ
Ð²ÑÐ¿Ð»ÐµÑÐº

description: Ð Ð´Ð¸ÑÑÐµÑÑÐ°ÑÐ¸Ð¾Ð½Ð½Ð¾Ð¹ ÑÐ°Ð±Ð¾ÑÐµ Ð¿ÑÐµÐ´ÑÑÐ°Ð²Ð»ÐµÐ½Ñ ÑÐµÐ·ÑÐ»ÑÑÐ°ÑÑ Ð²Ð·Ð°Ð¸Ð¼Ð¾Ð´ÐµÐ¹ÑÑÐ²Ð¸Ñ Ð¸ Ð¾ÑÐ°Ð¶Ð´ÐµÐ½Ð¸Ñ Ð²Ð»Ð°Ð³Ð¸ Ð½Ð° Ð¿Ð»Ð¾ÑÐºÑÑ Ð¸ ÑÐµÐ»ÑÐµÑÐ½ÑÑ Ð¿Ð¾Ð²ÐµÑÑÐ½Ð¾ÑÑÑ ÑÐ¾Ð¿ÐµÐ». ÐÐ° Ð¾ÑÐ½Ð¾Ð²Ðµ Ð¸ÑÑÐ»ÐµÐ´Ð¾Ð²Ð°Ð½Ð¸Ð¹ ÑÐ°Ð·ÑÐ°Ð±Ð¾ÑÐ°Ð½Ñ ÑÐ¸ÑÐ»ÐµÐ½Ð½ÑÐµ Ð¼Ð¾Ð´ÐµÐ»Ð¸ Ð´Ð²Ð¸Ð¶ÐµÐ½Ð¸Ñ Ð¸ Ð¾ÑÐ°Ð¶Ð´ÐµÐ½Ð¸Ñ Ð²Ð»Ð°Ð³Ð¸ Ð² Ð¼ÐµÐ¶Ð»Ð¾Ð¿Ð°ÑÐ¾ÑÐ½ÑÑ ÐºÐ°Ð½Ð°Ð»Ð°Ñ ÑÐ¾Ð¿Ð»Ð¾Ð²Ð¾Ð¹ ÑÐµÑÐµÑÐºÐ¸ Ñ Ð¿Ð»Ð¾ÑÐºÐ¾Ð¹ Ð¸ ÑÐµÐ»ÑÐµÑÐ½Ð¾Ð¹ Ð¿Ð¾Ð²ÐµÑÑÐ½Ð¾ÑÑÑÑ. Ð¡ Ð¿Ð¾Ð¼Ð¾ÑÑÑ Ð¼Ð¾Ð´ÐµÐ»Ð¸ Ð²Ð·Ð°Ð¸Ð¼Ð¾Ð´ÐµÐ¹ÑÑÐ²Ð¸Ñ ÐºÐ°Ð¿Ð»Ð¸ Ñ Ð¿Ð¾Ð²ÐµÑÑÐ½Ð¾ÑÑÑÑ Ð¿ÑÐ¾Ð²ÐµÐ´ÐµÐ½Ð¾ ÑÑÐ°Ð²Ð½ÐµÐ½Ð¸Ðµ ÑÐ½ÐµÑÐ³Ð¸Ð¸ ÑÑÐ¾Ð·Ð¸Ð¸ Ð¿ÑÐ¸ ÑÑÐ¾Ð»ÐºÐ½Ð¾Ð²ÐµÐ½Ð¸Ð¸ Ð²Ð»Ð°Ð³Ð¸ Ð½Ð° Ð¿Ð¾Ð²ÐµÑÑÐ½Ð¾ÑÑÐ¸ Ð»Ð¾Ð¿Ð°ÑÐºÐ¸ ÑÐ¾Ð¿Ð»Ð° Ñ ÑÐµÐ»ÑÐµÑÐ½Ð¾Ð¹ Ð¿Ð¾Ð²ÐµÑÑÐ½Ð¾ÑÑÑÑ Ñ ÑÐ½ÐµÑÐ³Ð¸ÐµÐ¹ ÑÑÐ¾Ð·Ð¸Ð¸ Ð¿ÑÐ¸ ÑÑÐ¾Ð»ÐºÐ½Ð¾Ð²ÐµÐ½Ð¸Ð¸ Ð²Ð»Ð°Ð³Ð¸ Ð½Ð° Ð¿Ð¾Ð²ÐµÑÑÐ½Ð¾ÑÑÐ¸ Ð»Ð¾Ð¿Ð°ÑÐºÐ¸ ÑÐ¾Ð¿Ð»Ð° Ñ Ð³Ð»Ð°Ð´ÐºÐ¾Ð¹ Ð¿Ð¾Ð²ÐµÑÑÐ½Ð¾ÑÑÑÑ. ÐÑÑÐ»ÐµÐ´Ð¾Ð²Ð°Ð½Ð¾ ÑÑÐ¾Ð»ÐºÐ½Ð¾Ð²ÐµÐ½Ð¸Ðµ Ð²Ð»Ð°Ð³Ð¸ Ð½Ð° ÑÐµÐ»ÑÐµÑÐ½ÑÑ Ð¿Ð¾Ð²ÐµÑÑÐ½Ð¾ÑÑÑ ÑÐ¾Ð¿Ð»Ð° Ð¸ Ð±ÑÐ»Ð¾ Ð¾Ð¿ÑÐµÐ´ÐµÐ»ÐµÐ½Ð¾, ÐºÐ°ÐºÐ¾Ð¹ Ð´Ð¾Ð»Ð¶ÐµÐ½ Ð±ÑÑÑ ÑÐ³Ð¾Ð» ÐºÐ°Ð½Ð°Ð²Ð¾Ðº, ÑÑÐ¾Ð±Ñ Ð½Ð° Ð»Ð¾Ð¿Ð°ÑÐ¾Ðº ÑÐ¾Ð¿Ð»Ð° Ð±ÑÐ»Ð¾ Ð½Ð°Ð¸Ð±Ð¾Ð»ÑÑÐ¸Ðµ Ð¾ÑÐ°Ð¶Ð´ÐµÐ½Ð¸Ñ Ð²Ð»Ð°Ð³Ð¸ Ð¸ Ð½Ð°Ð¸Ð¼ÐµÐ½ÑÑÐ°Ñ ÑÑÐ¾Ð·Ð¸Ñ ÑÐ¾Ð¿ÐµÐ».
Supplemental Material - A data-driven investigation on park visitation and income mixing of visitors in New York City
Creators: name: Wei, Hanxue
name: Huang, Xiao
name: Wang, Sicheng
name: Lu, Junyu
name: Li, Zhenlong
name: Zhu, Liao
Publisher: name: SAGE Journals
Year: 2022
Subjects: Geography
Urban and Regional Planning not elsewhere classified

description: Supplementary Material for A data-driven investigation on park visitation and income mixing of visitors in New York City by Hanxue Wei, Xiao Huang, Sicheng Wang, Junyu Lu, Zhenlong Li, Liao Zhu in Environment and Planning B: Urban Analytics and City Science.
Additional file 1 of Subtelomeric plasticity contributes to gene family expansion in the human parasitic flatworm Schistosoma mansoni
Creators: name: Brann, T
name: Beltramini, A
name: Chaparro, C
name: Berriman, M
name: Doyle, SR
name: Protasio, AV
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 1: Supplementary Figure 1.
Chromatin accessibility prediction via convolutional Long Short-Term Memory networks with k-mer embedding
Creators: name: Min, Xu
name: Wanwen Zeng
name: Chen, Ning
name: Chen, Ting
name: Jiang, Rui
Publisher: name: F1000Research
Year: 2017

description: Motivation: Experimental techniques for measuring chromatin accessibility are expensive and time consuming, appealing for the development of computational approaches to predict open chromatin regions from DNA sequences. Along this direction, existing methods fall into two classes: one based on handcrafted k-mer features and the other based on convolutional neural networks. Although both categories have shown good performance in specific applications thus far, there still lacks a comprehensive framework to integrate useful k-mer co-occurrence information with recent advances in deep learning.

Results: We fill this gap by addressing the problem of chromatin accessibility prediction with a convolutional Long Short-Term Memory (LSTM) network with k-mer embedding. We first split DNA sequences into k-mers and pre-train k-mer embedding vectors based on the co-occurrence matrix of k-mers by using an unsupervised representation learning approach. We then construct a supervised deep learning architecture comprised of an embedding layer, three convolutional layers and a Bidirectional LSTM (BLSTM) layer for feature learning and classification. We demonstrate that our method gains high-quality fixed-length features from variable-length sequences and consistently outperforms baseline methods. We show that k-mer embedding can effectively enhance model performance by exploring different embedding strategies. We also prove the efficacy of both the convolution and the BLSTM layers by comparing two variations of the network architecture. We confirm the robustness of our model to hyper-parameters by performing sensitivity analysis. We hope our method can eventually reinforce our understanding of employing deep learning in genomic studies and shed light on research regarding mechanisms of chromatin accessibility.

Availability and implementation: The source code can be downloaded from https://github.com/minxueric/ismb2017_lstm.
Supplemental Material - Characterizing the inherent activity of urinary bladder matrix for adhesion, migration, and activation of fibroblasts as compared with collagen-based synthetic scaffold
Creators: name: Tang, Xiaoyu
name: Yang, Fengbo
name: Chu, Guoping
name: Li, Xiaoxiao
name: Fu, Qiuyan
name: Zou, Mingli
name: Zhao, Peng
name: Lu, Guozhong
Publisher: name: SAGE Journals
Year: 2022
Subjects: Materials Engineering not elsewhere classified

description: Supplemental Material for Characterizing the inherent activity of urinary bladder matrix for adhesion, migration, and activation of fibroblasts as compared with collagen-based synthetic scaffold by Xiaoyu Tang, Fengbo Yang, Guoping Chu, Xiaoxiao Li, Qiuyan Fu, Mingli Zou, Peng Zhao, and Guozhong Lu in Journal of Biomaterials Applications
title: Präpubertärer Sexualdimorphismus in Gesichtsform und 2D:4D Verhältnis
Creators: name: Meindl, Konstanze
Year: 2009

description: In dieser Diplomarbeit wurde untersucht, ob es bereits präpubertär einen morphometrisch nachweisbaren Unterschied in der Gesichtsform von Buben und Mädchen gibt und ob ein Zusammenhang zwischen der Gesichtsform und dem Zeige- zu Ringfingerverhältnis (2D:4D) besteht. Das 2D:4D Verhältnis wird intrauterin determiniert und mit pränatalem Testosteron assoziiert. Bei Erwachsenen treten robuste, männliche Charakteristika bei einem niedrigen 2D:4D Verhältnis auf. Grazile, weibliche Merkmale zeigen sich bei einem hohen 2D:4D Verhältnis, für Kinder wird das gleiche Muster in der Gesichtsform wie bei Erwachsenen angenommen. Es wurden standardisierte Fotos von 44 Kindergesichtern (7 ± 4 Jahre) angefertigt und mittels Geometric Morphometrics ausgewertet. Das Alter erklärt 56,8% und die Gesichtsgröße 99% der Varianz der Gesichtsform in der ersten Hauptkomponente. Die Wachstumsvektoren von Buben- und Mädchengesichtern unterscheiden sich im Mund- und Nasenbereich signifikant (p = 0,006). Signifikante Gestaltunterschiede wurden nur zwischen den jüngeren und älteren Buben (p = 0,013) gefunden. Der Größenvergleich der Gesichter ergibt, dass die älteren Buben größer sind als alle anderen aus der Stichprobe. Vor dem 7. Lebensjahr unterscheiden sich Buben- und Mädchengesichter in der Gesichtsgröße allerdings nicht signifikant. Bei Buben konnte ein signifikanter Zusammenhang zwischen der Gesichtsform und dem 2D:4D Verhältnis gezeigt werden (p = 0,036), dessen Muster dem bei Erwachsenen entspricht. Für Mädchen konnte dieser Zusammenhang nicht gefunden werden. Ein präpubertärer Unterschied in der Gesichtsform zwischen Buben und Mädchen, wurde also nicht nur in die Gesichtsgröße, sondern auch anhand der Wachstumsvektoren im Mund- und Nasenbereich sowie regionaler Gestaltunterschieden zwischen Buben und Mädchen gezeigt. Der Zusammenhang des 2D:4D Verhältnisses mit der Gesichtsform bei Buben, der für Mädchen nicht gefunden wurde, deutet darauf hin, dass sich pränatales Testosteron mehr als pränatales Östrogen in den Fingerlängen wiederspiegelt.
Additional file 2 of Subtelomeric plasticity contributes to gene family expansion in the human parasitic flatworm Schistosoma mansoni
Creators: name: Brann, T
name: Beltramini, A
name: Chaparro, C
name: Berriman, M
name: Doyle, SR
name: Protasio, AV
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 2: Supplementary Figure 2.
International Undergraduate Students’ Awareness and Utilization of Academic Library Resources - Michigan Library Scholars Project
Creators: name: Tran, Mai
Publisher: name: My University
Year: 2024
Subjects: subject: Michigan Library Scholars, MLS
subject: Library Science
subject: Information Science

description: This project presentation was part of the University of Michigan's "Michigan Library Scholars" internship in the summer of 2024. This Michigan Library Scholars project, titled "How Do International Students Experience the U-M Library? An Exploration Using the Library's 2023 Survey Data".
description: During this project, titled "How Do International Students Experience the U-M Library? An Exploration Using the Library's 2023 Survey Data", the participating student used the data from the 2023 U-M Library Survey to explore, specifically, how international students experience the library, and what needs international students share and don't share with students born in the U.S. The findings of this project shed new light on how the U-M Library can effectively serve a very large, diverse, and important group of students on our campus.
Saúde dos universitários da UERJ durante a  pandemia de Covid-19
Creators: name: Conceição Garcia, Magno
name: Paravidino, Vitor
name: Sichieri, Rosely
Publisher: name: Zenodo
Year: 2022

description: Ingressar em uma universidade é mais do que uma escolha de profissão. No geral, os indivíduos passam a ter mais autonomia sobre suas ações, e, comumente, adotam determinados comportamentos que podem provocar efeitos negativos na saúde (TAO et al., 2000). Estudos desenvolvidos com jovens universitários têm descrito elevada prevalência de sintomas depressivos, ansiedade, obesidade, dieta desequilibrada, uso excessivo de álcool, comportamentos sedentários e inatividade física, tabagismo, privação das horas de sono e qualidade do sono ruim (CHOI, 2020; FRANCO; FERRAZ; SOUSA, 2019; GHROUZ et al., 2019; HERADSTVEIT et al., 2021; LIU; PING; GAO, 2019).

Os últimos anos foram marcados pela pandemia de Covid-19 e os impactos sociais, políticos, econômicos e culturais foram enormes. Tentando desacelerar a proliferação do vírus, diversos países adotaram medidas restritivas. O Brasil não apresentou uma política nacional de gestão da pandemia, mas, estados e municípios adotaram algumas medidas de distanciamento social, como, o fechamento dos serviços não essenciais e a recomendação do isolamento social (CAPONI, 2020; NATIVIDADE et al., 2020). Com isso, os universitários ficaram em casa e as aulas passaram a ser online. Malta e colaboradores (2020) observaram que esse confinamento em casa foi associado à alteração do sono, redução de atividade física e piora da saúde mental, entre adultos brasileiros (MALTA et al., 2020). Na metanálise realizada por Chang et al. (2021), a partir de dados de universitários de diversos países, a prevalência de ansiedade foi de 28% e a prevalência de depressão foi de 34%.
Additional file 3 of Subtelomeric plasticity contributes to gene family expansion in the human parasitic flatworm Schistosoma mansoni
Creators: name: Brann, T
name: Beltramini, A
name: Chaparro, C
name: Berriman, M
name: Doyle, SR
name: Protasio, AV
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 3: Supplementary Figure 3.
title: Chemische und enzymkatalysierte Synthesen von 2-Azido-2-desoxy-D-glucose und 2-Azido-2-desoxy-cellobiose
Creators: name: Gabra, Nermeen
Year: 2009

description: Es geht um die Durchführung von organisch-chemischen und enzymkatalysierten Synthesen von Zwischenprodukten für die Herstellung glukosaminhältiger Sacchariden.
SEMANTIC-STRUCTURAL ANALYSIS OF PROVERBS IN ENGLISH AND UZBEK LANGUAGES WITH THE COMPONENT OF HEAD, HAND AND FOOT
Creators: name: Isakova, Z.
name: Abdulmalikova, M.
Publisher: name: Zenodo
Year: 2024

description: The study of proverbs extends beyond language to reveal the underlying thought processes and worldviews of different societies. Analyzing proverbs allows us to explore how cultures use language to convey complex ideas and traditional wisdom in concise, memorable forms. By examining proverbs across different languages which belonged to various language families, we can uncover both shared and unique cultural themes and cognitive frameworks.
Unveiling the interplay of Mollow physics and perturbed free induction decay by nonlinear optical signals of a dynamically driven two-level system
Creators: name: Kaspari, Jan M.
name: Bracht, Thomas K.
name: Boos, Katarina
name: Kim, Sang Kyu
name: Sbresny, Friedrich
name: Müller, Kai
name: Reiter, Doris E.
Publisher: name: TU Dortmund
Year: 2024
Subjects: subject: Nonlinear optics
subject: Quantum dots
subject: Pump-probe spectroscopy
subject: Two-level models
subject: 530

description: Nonlinear optical signals in optically driven quantum systems can reveal coherences and thereby open up the possibility for manipulation of quantum states. While the limiting cases of ultrafast and continuous-wave excitation have been extensively studied, the time dynamics of finite pulses bear interesting phenomena. In this paper, we explore the nonlinear optical probe signals of a two-level system excited with a laser pulse of finite duration. In addition to the prominent Mollow peaks, the probe spectra feature several smaller peaks for certain time delays. Similar features have been recently observed for resonance fluorescence signals [K. Boos et al., Phys. Rev. Lett. 132, 053602 (2024)]. We discuss that the emergent phenomena can be explained by a combination of Mollow triplet physics and perturbed free induction decay effects, providing an insightful understanding of the underlying physics.
description: Physical review research;6(2)
Grammatical innovations in German in multilingual Namibia: the expanded use of linking elements and gehen ‘go’ as a future auxiliary
Creators: name: Shah, Sheena
name: Zimmer, Christian
Publisher: name: TU Dortmund
Year: 2023
Subjects: subject: German
subject: Namibia
subject: linking elements
subject: future tense
subject: language contact
subject: 420
subject: 400
subject: 430
subject: 070
subject: 900

description: In this paper, we provide an overview of the history and sociolinguistic setting of Germans and German in Namibia, which serves as a backdrop for our discussion of two grammatical innovations in Namibian German. German has been actively used in Namibia since the 1880s, having been brought to the country through colonization, and it remains linguistically vital today. Via a questionnaire study, we investigate the expanded use of two grammatical innovations in Namibian German, namely, i) linking elements and ii) gehen as a future auxiliary. We explore various factors that could have contributed to the emergence of these innovations in order to better understand the dynamics of German in multilingual Namibia.
description: Journal of Germanic linguistics;35(3)
Opening digital fabrication: transforming TechKnowledgies
Creators: name: Schneider, Christoph
Publisher: name: KIT Scientific Publishing
Year: 2018
Subjects: Open Source Hardware
Assemblage
Aktionsforschung
Real-Experiment
Visionen
assemblage
action research
real-life experiment
visions

description: This study analyses the field of open digital fabrication where novel digital capabilities and hopes for social transformation have merged to form arrangements that seek to democratise knowledge and technology through collaboration. Through qualitative social science the study analyses FabLabs and open source technologies and the respective collective procedures that produce and organise technology and knowledge that redefine the entanglement of our society and its technologies.
sj-docx-1-whe-10.1177_17455057231218197 – Supplemental material for Lumbopelvic pain and sick leave during pregnancy: A comparison of Italy and Norway
Creators: name: Haakstad, Lene Annette Hagen
name: Benvenuti, Maria Beatrice
name: Dalhaug, Emilie Mass
name: Bø, Kari
Publisher: name: SAGE Journals
Year: 2023
Subjects: Obstetrics and Gynaecology

description: Supplemental material, sj-docx-1-whe-10.1177_17455057231218197 for Lumbopelvic pain and sick leave during pregnancy: A comparison of Italy and Norway by Lene Annette Hagen Haakstad, Maria Beatrice Benvenuti, Emilie Mass Dalhaug and Kari Bø in Women’s Health
Additional file 4 of Subtelomeric plasticity contributes to gene family expansion in the human parasitic flatworm Schistosoma mansoni
Creators: name: Brann, T
name: Beltramini, A
name: Chaparro, C
name: Berriman, M
name: Doyle, SR
name: Protasio, AV
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 4: Supplementary Figure 4.
title: Kinetische Monte-Carlo-Simulation mit variabler Barrierenhöhe an L12 <<[L 1 tief 2]>>-geordnetem Ni3Al <<[Ni tief 3 Al]>>
Creators: name: Martin, Leitner
Year: 2007

description: Im Rahmen dieser Diplomarbeit wird ein neues Modell zur Berechnung von Übergangsraten bei Atomsprungprozessen vorgestellt. Dieser realistischere Ansatz basiert hauptsächlich auf der Analyse von Sprungprofilen, die mit Hilfe von ab initio-Berechnungen erstellt wurden. Das neue Modell berücksichtigt die variable Barrierenhöhe bei Sprungprozessen und stellt somit eine Änderung der in der Literatur vorherrschenden Berechnungsart der Übergangsraten mit Hilfe konstanter Barrierenhöhe dar. Grundlegend hierfür ist der Einfluss des sogenannten '4-Atom-Fensters', das in der kubisch-flächenzentrierten Struktur auftritt, auf die Höhe der Barriere. Dieser neue Ansatz wird mit Hilfe von Monte-Carlo-Simulationen getestet und die ersten Ergebnisse präsentiert.
Building the Humanities Citation Index. A Case in Point for Open Bibliodata
Creators: name: Romanello, Matteo
name: Colavizza, Giovanni
name: Peroni, Silvio
Publisher: name: Zenodo
Year: 2023
Subjects: bibliographical data
citation index

description: Presentation given at the ADHO Digital Humanities Conference 2023 (DH2023) in Graz on 13 July 2023 as part of the panel Fostering Collaboration to Enable Bibliodata-driven Research in the Humanities.
Scale4C: an R/Bioconductor package for scale-space transformation applied to 4C-seq data
Creators: name: Walter, Carolin
name: Dugas, Martin
Publisher: name: F1000Research
Year: 2017

description: 4C-seq is a method to identify chromosomal contact partners for one chosen position in the genome. Since the 3C-based technique inherently causes a fragment structure of the output, and suffers from technical artifacts like PCR bias, most current 4C-seq algorithms use windows or smoothing techniques to decrease noise, introducing arbitrary window sizes or smoothing parameters. This leads to the general problem of parameter choice for optimal analysis and visualization.

We present the R package Scale4C, which uses Witkin's scale-space filtering approach to create a novel multi-scale 4C-seq near-cis visualization. This representation of the data allows for explorative analysis of candidate interactions, and structural comparison of datasets. During scale-space filtering, the 4C-seq signal is smoothed with Gauss kernels of increasing smoothing factors. Inflection points of the resulting curves are subsequently tracked in a so-called fingerprint map, and singular points of these curves are identified. Focusing on features of the data ('peaks' and 'valleys') and their transitions for multiple smoothing parameters, the package's plot functions can create 2D tesselation maps in scale-space from these singularities. Tesselation maps allow to visually assess prominent features of the 4C-seq signal with a high degree of stability for multiple smoothing factors, and thus potential interactions.

Additional functions of the package include further visualization routines for smoothed data with a chosen smoothing factor and its corresponding inflection points, and plot functions for fingerprint maps with their traced singularities. Data import from bed-files and Basic4Cseq is supported, as well as export of the scale-space tesselation in tabular form.
Seeing the trees through the forest: sequence-based homo- and heteromeric protein-protein interaction sites prediction using random forest
Creators: name: Qingzhen Hou
name: Geest, Paul De
name: Vranken, Wim F.
name: Heringa, Jaap
name: K. Anton Feenstra
Publisher: name: F1000Research
Year: 2017

description: With ever increasing numbers of protein sequences becoming available, annotating genome data based on computational predictions is becoming increasingly successful. However, a still very challenging task is predicting protein interface residues involved in protein-protein interactions (PPIs). In this work, we evaluate the importance of various features using Random Forest, and include a novel features (backbone flexibility) to improve PPI interface prediction.
We trained our RF predictor in three ways: only on homodimer complexes (RF_homo), only on heteromers (RF_hetero), and on the homo and hetero sets (RF_combined). All three predictors show good performance on both homomeric and heteromeric interface prediction, and compare very well with other methods. This indicates our predictor managed to capture common properties of interfaces in both homodimers and heterodimers.
sj-docx-1-sjp-10.1177_14034948231214580 – Supplemental material for National health registries – a ‘goldmine’ for studying non-communicable disease occurrence in Norway – the NCDNOR project
Creators: name: NYSTAD, WENCHE
name: HJELLVIK, VIDAR
name: LARSEN, INGER K.
name: ROBSAHM, TRUDE E.
name: SUND, ERIK R.
name: KROKSTAD, STEINAR
name: HOPSTOCK, LAILA A.
name: GRIMSGAARD, SAMELINE
name: LANGHAMMER, ARNULF
name: BRAMNESS, JØRGEN G.
name: WISLØFF, TORBJØRN
name: LERGENMULLER, SIMON
name: DALENE, KNUT E.
name: MEYER, HAAKON E.
name: HOLVIK, KRISTIN
name: HELGELAND, JON
name: KARLSTAD, ØYSTEIN
name: ARIANSEN, INGER
Publisher: name: SAGE Journals
Year: 2023
Subjects: Public Health and Health Services not elsewhere classified

description: Supplemental material, sj-docx-1-sjp-10.1177_14034948231214580 for National health registries – a ‘goldmine’ for studying non-communicable disease occurrence in Norway – the NCDNOR project by WENCHE NYSTAD, VIDAR HJELLVIK, INGER K. LARSEN, TRUDE E. ROBSAHM, ERIK R. SUND, STEINAR KROKSTAD, LAILA A. HOPSTOCK, SAMELINE GRIMSGAARD, ARNULF LANGHAMMER, JØRGEN G. BRAMNESS, TORBJØRN WISLØFF, SIMON LERGENMULLER, KNUT E. DALENE, HAAKON E. MEYER, KRISTIN HOLVIK, JON HELGELAND, ØYSTEIN KARLSTAD and INGER ARIANSEN in Scandinavian Journal of Public Health
AN INVESTIGATION INTO THE DEVELOPMENT OF PRESCHOOL EDUCATION TEACHERS IN AN GIANG PROVINCE, VIET NAM
Creators: name: Nguyen Bach Thang
name: (*)Huynh Thanh Tien
name: Le Thi Hong Hanh
name: Tran Thi Huyen
name: Chau Soryaly
Publisher: name: Revista de Literatura
Year: 2025

description: Vietnam has a long history of education, and traditionally the Vietnamese people highly respect learning. However, preschool education in Vietnam started to be concerned in the early 1945 and it has made remarkable progress since the early 2000s. The Vietnamese Ministry of Education and Training (MOET) commits to improving access to preschool education across the country. The MOET has also attempted to enhance the quality of preschool education by revising the curriculum and upskilling its teaching workforce. According to Vietnam Education Law 2019, preschool education teachers are required to obtain a university degree. This paper aims to investigate the development of preschool education teachers in An Giang province located in the Mekong Delta region, Vietnam. The paper utilized a mixed- research method to collect quantitative and qualitative data from the tools of questionnaires, interviews of teachers and educational managers, and provincial document analysis. The research findings showed that the province is in the greater shortage of preschool education teachers in the rural areas than in towns. Its school and class network as well as quantity of preschool units that meet the national standards is below 50%. Also, the province has a lower teacher-pupil ratio in the classroom in comparison with that of the national ratio. The province has not had a clear roadmap to plan for developing the teaching workforce at this educational level. The paper ended with some conclusions and suggested some recommendations for this provincial educational leaders to take into consideration for its future preschool education teacher development in the context of the Vietnamese education being into the broadly and profoundly global integration progress.
sj-docx-3-pie-10.1177_09544089231217977 - Supplemental material for Optimization of the octagonal origami tube energy absorption using the artificial neural network and heuristic method
Creators: name: Aghamirzaie, Mojtaba
name: Ghasemi-Ghalebahman, Ahmad
name: Najibi, Amir
Publisher: name: SAGE Journals
Year: 2023
Subjects: Engineering not elsewhere classified
Materials Engineering not elsewhere classified

description: Supplemental material, sj-docx-3-pie-10.1177_09544089231217977 for Optimization of the octagonal origami tube energy absorption using the artificial neural network and heuristic method by Mojtaba Aghamirzaie, Ahmad Ghasemi-Ghalebahman and Amir Najibi in Proceedings of the Institution of Mechanical Engineers, Part E: Journal of Process Mechanical Engineering
Additional file 5 of Subtelomeric plasticity contributes to gene family expansion in the human parasitic flatworm Schistosoma mansoni
Creators: name: Brann, T
name: Beltramini, A
name: Chaparro, C
name: Berriman, M
name: Doyle, SR
name: Protasio, AV
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 5: Supplementary Figure 5.