cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Proceedings of Doctoral Consortium of ACM IMX 2024 Conference. Held at Stockholm, Sweden. June 12-14, 2024.
Creators: name: Basapur, Santosh
name: Malakhatka, Elena
name: Rostami, Asreen
name: Mcmillan, Donald
Publisher: name: figshare
Year: 2024
Subjects: classificationCode: 360504
subject: Interactive media
classificationCode: 460704
subject: Interactive narrative
classificationCode: 460806
subject: Human-computer interaction
classificationCode: 460910
subject: Information systems user experience design and development
classificationCode: 330310
subject: Interaction and experience design
classificationCode: 460708
subject: Virtual and mixed reality

description: IMX’s Doctoral Consortium (‘the DC’) was held as part of the IMX 2024 conference in Stockholm, Sweden. The Doctoral Consortium was attended by learners enrolled in a PhD program (or other doctoral degrees) or preparing their enrollment in fields that are relevant to the themes of IMX.

PhD students shared their research work and ideas with fellow PhD students and a panel of experienced researchers and designers in the fields associated with IMX. Students got a chance to present their work (research results and current status) and get feedback and suggestions from the panel. They participated in feedback-sharing activities as pairs and supported each other with ideas for research approaches and how to exploit their PhD experience best.
IMX is an inclusive, growing, interdisciplinary community welcoming new approaches, methods, and experiments in immersive media experiences.
title: Retrieval of top-of-atmosphere fluxes from combined EarthCARE lidar, imager, and broadband radiometer observations: the BMA-FLX product
Creators: name: Velázquez Blázquez, Almudena
name: Domenech, Carlos
name: Baudrez, Edward
name: Clerbaux, Nicolas
name: Salas Molar, Carla
name: Madenach, Nils
Publisher: name: Freie Universität Berlin
Year: 2024
Subjects: subject: aerosols
subject: clouds
subject: radiation
classificationCode: 551
subject: Geologie, Hydrologie, Meteorologie

description: The Earth Cloud, Aerosol and Radiation Explorer (EarthCARE) satellite mission is expected to provide new insights into aerosols, clouds, and radiation. The satellite's payload includes four instruments designed to synergistically retrieve vertical profiles of clouds and aerosols, along with the atmospheric radiation data. This will enable the determination of atmospheric heating rates and top-of-atmosphere radiances and fluxes. This paper focuses on the BMA-FLX processor, specifically created, developed, and validated to retrieve thermal and solar top-of-atmosphere radiative fluxes from longwave and shortwave radiances, measured along track by the EarthCARE Broad-Band Radiometer (BBR) instrument. These radiances are co-registered either at the surface or, in cloudy conditions, at the radiatively most significant vertical layer of the atmosphere (reference level). The Multi-Spectral Imager (MSI) and Atmospheric Lidar (ATLID) on board EarthCARE support cloud identification, while meteorological data from the European Centre for Medium-Range Weather Forecasts provide the surface and atmospheric necessary information. In the BMA-FLX processor, flux is estimated independently for each BBR view using different approaches for the longwave and shortwave radiances. A combined flux, derived from co-registered radiances at the reference level, is provided as the best estimate for a given scene. The radiance-to-flux conversion algorithms have been successfully validated through end-to-end verification using L1 and L2 synthetic data for three EarthCARE orbits. In general, a good agreement is found between the retrieved fluxes and the model truth, with root mean square errors (RMSEs) varying between 7 and 18 W m −2 for the solar fluxes and lower than 6 W m −2 for the thermal fluxes. The BMA-FLX's objective is to achieve radiative closure for EarthCARE with solar and thermal fluxes within 10 W m −2 .
Probe-based metagenomics pathogen detection: an added value for complex diagnosis. Results of a pilot experiment at the Portuguese National Institute of Health (INSA)
Creators: name: Ferreira, Rita
name: Coelho, Luís
name: Sobral, Daniel
name: Dourado Santos, João
Publisher: name: Zenodo
Year: 2024
Subjects: subject: Metagenomics
subject: Next-Generation Sequencing
subject: NGS
subject: Probe-based pathogen enrichment and detection
subject: Complex clinical diagnoses
subject: Bioinformatics
subject: FOS: Computer and information sciences

description: This poster was presented on the 9th International Conference on Clinical Metagenomics (ICCMg) in Geneva, Switzerland. 

The authors Rita Ferreira, Luís Coelho, Daniel Sobral and João Dourado Santos contributed equally to the elaboration of this experiment.

You can find an abstract for this poster below:

Metagenomics Next-Generation Sequencing (mNGS) promises accurate and rapid detection of unidentified and/or uncultivable organisms to aid clinical diagnosis. However, mNGS presents several challenges, such as high costs, small microbial/human genetic material ratio, and demanding laboratorial and computational resources.

Probe-based pathogen enrichment mNGS can strike a balance between hypothesis-free shotgun mNGS and conventional pathogen-specific detection. In this context, we tested two Illumina panels for probe-based pathogen enrichment and detection, the Respiratory and the Urinary Pathogen ID/AMR panels (RPIP and UPIP), which, together, target 383 pathogenic agents (virus, bacteria, fungi and parasites). The selections of samples intended to mimic samples’ heterogeneity of those routinely received at INSA: 99 clinical samples of different nature (e.g., cerebrospinal fluid, plasma, serum, urine, swabs, biopsies, etc.) for which at least one pathogen had been previously identified by (q)PCR were selected, with qPCR Cycle threshold (Ct) values ranging from 9.7 to 41.3. Overall, a total of 114 previously detected pathogens were targeted in this study.

Illumina’s turnkey bioinformatics solution (Explify®, BaseSpace) yielded hits for 73.7% of the expected pathogens. Still, as the use of NGS in clinical diagnosis requires robust bioinformatics confirmation, we further applied our start-to-end bioinformatics pipeline (INSaFLU-TELEVIR+) for viral and bacterial metagenomics detection (an expanded version of INSaFLU-TELEVIR, https://insaflu.insa.pt/). We could obtain a combined detection rate of 79.8%, reaching as high as 89.7% for viruses and 65.7% for bacteria. Although higher Ct values were clearly a significant factor underlying miss detections, we could still detect most pathogens even at Cts>30, with 39.5 being the highest Ct value for a detected pathogen in our dataset.

Despite the laborious pre-NGS wet-lab procedures, this pilot study suggest that the RPIP/UPIP probe-based Illumina panels, coupled with in-depth downstream bioinformatics, may constitute a powerful tool to help difficult diagnosis and support clinical decision.
Additional file 1 of Obesity may increase survival, regardless of nutritional status: a Swedish cohort study in nursing homes
Creators: name: Burman, Maria
name: Hörnsten, Carl
name: Gustafson, Yngve
name: Olofsson, Birgitta
name: Nordström, Peter
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 1: Appendix Table A1. Unadjusted Cox proportional hazards for associations of BMI and MNA-SF scores with 2-year all-cause mortality during follow-up intervals. Appendix Table A2. Unadjusted Cox proportional hazards for the association of BMI according to MNA-SF score with 2-year all-cause mortality. Appendix Table A3. Adjusted Cox proportional hazards for associations of BMI and MNA-SF scores with 2-year all-cause mortality, in women and men. Appendix Table A4. Unadjusted Cox proportional hazards for associations of BMI and MNA-SF scores with 2-year all-cause mortality, in women and men.
Clanculus (Clanculus) berthelotii
Creators: name: Harzhauser, Mathias
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Trochida
Trochidae
Clanculus
Clanculus berthelotii

description: Clanculus (Clanculus) berthelotii (d’Orbigny, 1840)
Present-day: E Atlantic (Madeira, Canary Islands). Not in the Azores (Cordeiro et al. 2015).
(Spadini 2006)
description: Published as part of Harzhauser, Mathias, 2021, The Cainozoic to present-day record of Circum-Mediterranean, NE Atlantic and North Sea Cantharidinae and Trochinae (Trochoidea, Gastropoda) - a synopsis, pp. 1-81 in Zootaxa 4902 (1) on page 62, DOI: 10.11646/zootaxa.4902.1.1, http://zenodo.org/record/4419088
MPEC 2025-A112 : 2025 AX1
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2025
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469
subject: 2025 AX1

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
Intra-individual Gene Expression Variability of Histologically Normal Breast Tissue
Creators: name: Shan, Y
name: Li, Q
name: Gierach, G.L
name: Chollet-Hinton, L
name: Troester, M.A
name: Kirk, E.L
name: Sun, X
Publisher: name: The University of North Carolina at Chapel Hill University Libraries
Year: 2018

description: Several studies have sought to identify novel transcriptional biomarkers in normal breast or breast microenvironment to predict tumor risk and prognosis. However, systematic efforts to evaluate intra-individual variability of gene expression within normal breast have not been reported. This study analyzed the microarray gene expression data of 288 samples from 170 women in the Normal Breast Study (NBS), wherein multiple histologically normal breast samples were collected from different block regions and different sections at a given region. Intra-individual differences in global gene expression and selected gene expression signatures were quantified and evaluated in association with other patient-level factors. We found that intra-individual reliability was relatively high in global gene expression, but differed by signatures, with composition-related signatures (i.e., stroma) having higher intra-individual variability and tumorigenesis-related signatures (i.e., proliferation) having lower intra-individual variability. Histological stroma composition was the only factor significantly associated with heterogeneous breast tissue (defined as > median intra-individual variation; high nuclear density, odds ratio [OR] = 3.42, 95% confidence interval [CI] = 1.15-10.15; low area, OR = 0.29, 95% CI = 0.10-0.86). Other factors suggestively influencing the variability included age, BMI, and adipose nuclear density. Our results underscore the importance of considering intra-individual variability in tissue-based biomarker development, and have important implications for normal breast research.
Additional file 1 of Kinesin-3 motors are fine-tuned at the molecular level to endow distinct mechanical outputs
Creators: name: Soppina, Pushpanjali
name: Patel, Nishaben
name: Shewale, Dipeshwari J.
name: Rai, Ashim
name: Sivaramakrishnan, Sivaraj
name: Naik, Pradeep K.
name: Soppina, Virupakshi
Publisher: name: figshare
Year: 2022
Subjects: subject: Biophysics
subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: 60506 Virology
subject: Computational Biology

description: Additional file 1: Figure S1. Bacterial expression of KHC(1-560) resulted in inactive and degraded protein. Figure S2. Generation of recombinant bacmids for of kinesin-1 and kinesin-3 motors. Figure S3. Baculovirus-purified constitutively active kinesin-1 and kinesin-3 motors. Figure S4. In vitro microtubule-based single-molecule motility assays of constitutively active kinesin-3 motors. Figure S5. Amino acid sequence alignment of kinesin-3 and kinesin-1 K-loop and their mutants. Figure S6. Ribbon diagram of KIF1A motor domain interacting with tubulin subunits. Figure S7. Loop8 contributes to the strong microtubule-binding affinity for kinesin-3 motors. Figure S8. Multi-motor microtubule gliding analysis of kinesin-3 motors. Figure S9. Kinesin-3 motors influence microtubule bending in vivo.
Additional file 2 of Kinesin-3 motors are fine-tuned at the molecular level to endow distinct mechanical outputs
Creators: name: Soppina, Pushpanjali
name: Patel, Nishaben
name: Shewale, Dipeshwari J.
name: Rai, Ashim
name: Sivaramakrishnan, Sivaraj
name: Naik, Pradeep K.
name: Soppina, Virupakshi
Publisher: name: figshare
Year: 2022
Subjects: subject: Biophysics
subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: 60506 Virology
subject: Computational Biology

description: Additional file 2: Table S1. Summary of ATPase properties of full-length kinesin-1 and kinesin-3 motors.
Clanculus (Clanculus) bonfittoi Chirli 2004
Creators: name: Harzhauser, Mathias
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Trochida
Trochidae
Clanculus
Clanculus bonfittoi

description: Clanculus (Clanculus) bonfittoi Chirli, 2004 †
Pliocene (Zanclean to Piacenzian): Mediterranean Sea (Italy).
(Chirli 2004)
description: Published as part of Harzhauser, Mathias, 2021, The Cainozoic to present-day record of Circum-Mediterranean, NE Atlantic and North Sea Cantharidinae and Trochinae (Trochoidea, Gastropoda) - a synopsis, pp. 1-81 in Zootaxa 4902 (1) on page 62, DOI: 10.11646/zootaxa.4902.1.1, http://zenodo.org/record/4419088
Clanculus (Clanculus) brebioni Landau, Van Dingenen & Ceulemans 2017
Creators: name: Harzhauser, Mathias
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Trochida
Trochidae
Clanculus
Clanculus brebioni

description: Clanculus (Clanculus) brebioni Landau, Van Dingenen & Ceulemans, 2017 †
Late Miocene (Tortonian): NE Atlantic (NW France: Loire Basin).
(Landau et al. 2017)
description: Published as part of Harzhauser, Mathias, 2021, The Cainozoic to present-day record of Circum-Mediterranean, NE Atlantic and North Sea Cantharidinae and Trochinae (Trochoidea, Gastropoda) - a synopsis, pp. 1-81 in Zootaxa 4902 (1) on page 62, DOI: 10.11646/zootaxa.4902.1.1, http://zenodo.org/record/4419088
E-cadherin breast tumor expression, risk factors and survival: Pooled analysis of 5,933 cases from 12 studies in the Breast Cancer Association Consortium
Creators: name: Martens, J.W.M.
name: Tollenaar, R.A.E.M.
name: Van Deurzen, C.H.M.
name: García-Closas, M.
name: Eilber, U
name: Schoemaker, M.J.
name: Hewitt, S.M
name: Jones, M
name: Van Asperen, C.J.
name: Hardisson, D
name: Van'T Veer, L.J.
name: Saum, K.-U.
name: Devilee, P
name: Cora, R
name: Sherman, M.E
name: Easton, D.F
name: Timmermans, A.M.
name: Schmidt, M.K
name: Figueroa, J.D.
name: Thomas, A.S.
name: Bolla, M.K
name: Palakal, M
name: Troester, M.A.
name: Mannermaa, A.
name: Eccles, D.M
name: Van Leeuwen, F.F.
name: Holleczek, B
name: Seynaeve, C.
name: Benitez, J
name: Brenner, H
name: Tengström, M.
name: Oh, H
name: Hooning, M.J
name: Milne, R.L
name: Chang-Claude, J
name: Pharoah, P.D.P.
name: Keeman, R
name: Heikkilä, P
name: Muranen, T.A
name: Ruddy, K.J.
name: Olson, J.E.
name: Blomqvist, C
name: Smit, V.T.H.B.M.
name: Cuk, K
name: Perez, J.I.A.
name: Nevanlinna, H.
name: Sironen, R.
name: Hartikainen, J.M
name: Orr, N.
name: Swerdlow, A.J.
name: Horne, H.N
name: Couch, F.J
Publisher: name: Springer
Year: 2018

description: E-cadherin (CDH1) is a putative tumor suppressor gene implicated in breast carcinogenesis. Yet, whether risk factors or survival differ by E-cadherin tumor expression is unclear. We evaluated E-cadherin tumor immunohistochemistry expression using tissue microarrays of 5,933 female invasive breast cancers from 12 studies from the Breast Cancer Consortium. H-scores were calculated and case-case odds ratios (OR) and 95% confidence intervals (CIs) were estimated using logistic regression. Survival analyses were performed using Cox regression models. All analyses were stratified by estrogen receptor (ER) status and histologic subtype. E-cadherin low cases (N = 1191, 20%) were more frequently of lobular histology, low grade, >2 cm, and HER2-negative. Loss of E-cadherin expression (score < 100) was associated with menopausal hormone use among ER-positive tumors (ever compared to never users, OR = 1.24, 95% CI = 0.97-1.59), which was stronger when we evaluated complete loss of E-cadherin (i.e. H-score = 0), OR = 1.57, 95% CI = 1.06-2.33. Breast cancer specific mortality was unrelated to E-cadherin expression in multivariable models. E-cadherin low expression is associated with lobular histology, tumor characteristics and menopausal hormone use, with no evidence of an association with breast cancer specific survival. These data support loss of E-cadherin expression as an important marker of tumor subtypes.
Additional file 1 of Patterns and trends of antibacterial treatment in patients with urinary tract infections, 2015–2019: an analysis of health insurance data
Creators: name: Schmiemann, Guido
name: Hoffmann, Falk
name: Hamprecht, Axel
name: Jobski, Kathrin
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: Cancer
subject: 60506 Virology
subject: FOS: Biological sciences

description: Additional file 1: Table S1. Yearly UTI prevalences by sex and age group based on all persons insured for at last one day of the respective year. Table S2. Frequency of quarters with at least one UTI diagnosis on a person level based on all persons with at least one UTI during the study period.
Clanculus (Clanculus) cerberi
Creators: name: Harzhauser, Mathias
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Trochida
Trochidae
Clanculus
Clanculus cerberi

description: Clanculus (Clanculus) cerberi (Brongniart, 1823) †
= Leptothyra prosanguínea Sacco, 1896
Oligocene (Rupelian): Western Tethys (Italy).
(Bonci et al. 2000)
description: Published as part of Harzhauser, Mathias, 2021, The Cainozoic to present-day record of Circum-Mediterranean, NE Atlantic and North Sea Cantharidinae and Trochinae (Trochoidea, Gastropoda) - a synopsis, pp. 1-81 in Zootaxa 4902 (1) on page 62, DOI: 10.11646/zootaxa.4902.1.1, http://zenodo.org/record/4419088
Clanculus (Clanculus) corallinus
Creators: name: Harzhauser, Mathias
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Trochida
Trochidae
Clanculus
Clanculus corallinus

description: Clanculus (Clanculus) corallinus (Gmelin, 1791)
= Clanculus (Clanculus) moelensis Cox, 1936.
Late Miocene (Tortonian): Proto-Mediterranean Sea (Italy: Po Valley).
Pliocene (Zanclean): Mediterranean Sea (Tunisia, Spain, Italy, France, Rhodes).
Early/middle Pliocene: E Atlantic (Spain: Guadalquivir Basin, Portugal: Mondego Basin).
Pleistocene: Mediterranean Sea (Italy, Sicily).
Present-day: Mediterranean Sea.
(Sacco 1896; Landau et al. 2003; Spadini 2006).
description: Published as part of Harzhauser, Mathias, 2021, The Cainozoic to present-day record of Circum-Mediterranean, NE Atlantic and North Sea Cantharidinae and Trochinae (Trochoidea, Gastropoda) - a synopsis, pp. 1-81 in Zootaxa 4902 (1) on pages 62-63, DOI: 10.11646/zootaxa.4902.1.1, http://zenodo.org/record/4419088
The power of embodied and arts-based learning in a co-curriculum course at Stellenbosch University
Creators: name: Costandius, Elmarie
name: Andrews, Ruth
Publisher: name: figshare
Year: 2023
Subjects: classificationCode: 390101
subject: Creative arts, media and communication curriculum and pedagogy
classificationCode: 390102
subject: Curriculum and pedagogy theory and development
classificationCode: 390303
subject: Higher education
classificationCode: 441004
subject: Social change

description: AbstractThe recent Khampepe Report (2022) called for the implementation of a co-curriculum module to foster in students critical and holistic perspectives about social justice issues and to dismantle pre-existing biases. The Shared Humanity (SH) module located in the Division: Student Aﬀairs at Stellenbosch University was designed with these issues in mind. This paper discusses the Visual Arts sessions of the SH module, which are premised on relational perspectives derived from new materialist and indigenous knowledge frameworks. A number of practices from the SH Visual Arts session have been analysed alongside participants’ reflections to investigate how embodied and arts-based learning can facilitate critical thinking, personal engagement with course material, holistic perspectives and the recognition of agency of the human and non-human. Students were able to engage personally with course content, as the practice sessions connected abstract ideas to real life. Aﬀect must be included in education, as it has political power and impacts how students learn. By examining relevant literature, specific learning practices and student reflections from the Visual Arts sessions, the paper makes a case for the meaningful inclusion and development of embodied and arts-based learning strategies into social justice pedagogical frameworks in higher education. Student wellbeing cannot be separated from the process of learning, as to do so reinforces outdated dualisms that see cognition as separate from corporeal experience. This paper argues that embodied and arts-based learning strategies oﬀer new ways of thinking and learning, and as such can become powerful tools for engaging students meaningfully in the transformation project.
Do the loop: aligning student training with applied research to collaboratively advance biomedical workforce development
Creators: name: Yarnold, Jesse
name: Gautom, Priyanka
name: Ito, Sydney
name: Dunlap, Clare
name: Winders, Bradie
name: Lanford, Rebecca
name: Marsh, Trisha
name: Cordova Nicolas, Karla
name: Zhou, Felicia
name: Poole, Juniper
name: Jones, Jamie
name: Jones, Adri
name: Gillespie, Lydia
Publisher: name: Oregon Health and Science University
Year: 2024
Subjects: subject: Problem-Based Learning
subject: Qualitative Research
subject: Health Equity
subject: Curriculum
subject: Students
subject: equity-minded assessment
subject: workforce development

description: Course evaluations and program assessments are frequently used to gauge student progress and outcomes, with resulting data often reviewed by course faculty, program directors, and assessment personnel. While it is conventionally known that data inform change, the process can sometimes feel unclear to students and unsustainable to faculty and staff since time constraints are a known barrier for any project. While quantitative data from assessments can be automated to support rapid analyses, qualitative data from these same instruments (e.g., student perspectives found in open prompts) take more time to analyze, which can potentially delay changes or their time to analysis and implementation. Together, the interprofessional course structure offers an opportunity to align student training and applied research for iteratively improving education and curriculum improvement, while curating a set of collaborative processes for guiding ongoing work.
Clanculus (Clanculus) laurae Cecalupo, Buzzurro & Mariani 2008
Creators: name: Harzhauser, Mathias
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Trochida
Trochidae
Clanculus
Clanculus laurae

description: Clanculus (Clanculus) laurae Cecalupo, Buzzurro & Mariani, 2008
Present-day: Mediterranean Sea off Tunisia.
(Cecalupo et al. 2008)
description: Published as part of Harzhauser, Mathias, 2021, The Cainozoic to present-day record of Circum-Mediterranean, NE Atlantic and North Sea Cantharidinae and Trochinae (Trochoidea, Gastropoda) - a synopsis, pp. 1-81 in Zootaxa 4902 (1) on page 63, DOI: 10.11646/zootaxa.4902.1.1, http://zenodo.org/record/4419088
Additional file 1 of A review of smartphone applications designed to improve occupational health, safety, and well-being at workplaces
Creators: name: Karlsen, Iben Louise
name: Svendsen, Peter Aske
name: Abildgaard, Johan Simonsen
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Additional file 1. Overview of included apps.
Ki-67 Expression in Breast Cancer Tissue Microarrays
Creators: name: Miller, R
name: Geradts, J
name: Cohen, S.M
name: Khoury, T
name: Ambrosone, C.B
name: Davis, W
name: Zirpoli, G
name: Mathews, M.M
name: Palmer, J.R
name: Omilian, A
name: Bshara, W
name: Troester, M
Publisher: name: The University of North Carolina at Chapel Hill University Libraries
Year: 2017

description: Objectives Ki-67 has been proposed to be used as a surrogate marker to differentiate luminal breast carcinomas (BCs). The purpose of this study was to determine the utility of and best approaches for using tissue microarrays (TMAs) and Ki-67 staining to distinguish luminal subtypes in large epidemiology studies of luminal/human epidermal growth factor receptor 2 (HER2)-negative BC. Methods Full-section and TMA (three 0.6-mm cores and two 1.0-mm cores) slides of 109 cases were stained with Ki-67 antibody. We assessed two ways of collapsing TMA cores: a weighted approach and mitotically active approach. Results For cases with at least a single 0.6-mm TMA core (n = 107), 16% were misclassified using a mitotically active approach and 11% using a weighted approach. For cases with at least a single 1.0-mm TMA core (n = 101), 5% were misclassified using either approach. For the 0.6-mm core group, there were 33.3% discordant cases. The number of discordant cases increased from 18% in the group of two cores to 40% in the group of three cores (P =.039). Conclusions Ki-67 tumor heterogeneity was common in luminal/HER2- BC. Using a weighted approach was better than using a mitotically active approach for core to case collapsing. At least a single 1.0-mm core or three 0.6-mm cores are required when designing a study using TMA.
Clanculus (Clanculus) ozennei Crosse 1862
Creators: name: Harzhauser, Mathias
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Trochida
Trochidae
Clanculus
Clanculus ozennei

description: Clanculus (Clanculus) ozennei Crosse, 1862 †
Eocene (Bartonian): NE Atlantic (France: Paris Basin).
(Le Renard & Pacaud 1995; Pacaud & Le Renard 1995)
description: Published as part of Harzhauser, Mathias, 2021, The Cainozoic to present-day record of Circum-Mediterranean, NE Atlantic and North Sea Cantharidinae and Trochinae (Trochoidea, Gastropoda) - a synopsis, pp. 1-81 in Zootaxa 4902 (1) on page 63, DOI: 10.11646/zootaxa.4902.1.1, http://zenodo.org/record/4419088
Additional file 1 of Minimum acceptable diet and associated factors among children aged 6–23 months during fasting days of orthodox Christian mothers in Gondar city, North West Ethiopia
Creators: name: Birhanu, Haregewoin
name: Gonete, Kedir Abdela
name: Hunegnaw, Melkamu Tamir
name: Aragaw, Fantu Mamo
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Statistics
subject: FOS: Mathematics
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 1.
Additional file 2 of A review of smartphone applications designed to improve occupational health, safety, and well-being at workplaces
Creators: name: Karlsen, Iben Louise
name: Svendsen, Peter Aske
name: Abildgaard, Johan Simonsen
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Additional file 2. Search strings.
Clanculus (Clanculus) perrisi
Creators: name: Harzhauser, Mathias
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Trochida
Trochidae
Clanculus
Clanculus perrisi

description: Clanculus (Clanculus) perrisi (Grateloup, 1832) †
Early Miocene (Burdigalian): NE Atlantic (France: Aquitaine Basin).
(Spadini 2006)
description: Published as part of Harzhauser, Mathias, 2021, The Cainozoic to present-day record of Circum-Mediterranean, NE Atlantic and North Sea Cantharidinae and Trochinae (Trochoidea, Gastropoda) - a synopsis, pp. 1-81 in Zootaxa 4902 (1) on page 63, DOI: 10.11646/zootaxa.4902.1.1, http://zenodo.org/record/4419088
Clanculus (Clanculus) petziae Rubio, Rolan & Ryall in Rubio & Rolan 2002
Creators: name: Harzhauser, Mathias
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Trochida
Trochidae
Clanculus
Clanculus petziae

description: Clanculus (Clanculus) petziae Rubio, Rolán & Ryall in Rubio & Rolán, 2002
Present-day: E Atlantic Ocean.
(Spadini 2006)
description: Published as part of Harzhauser, Mathias, 2021, The Cainozoic to present-day record of Circum-Mediterranean, NE Atlantic and North Sea Cantharidinae and Trochinae (Trochoidea, Gastropoda) - a synopsis, pp. 1-81 in Zootaxa 4902 (1) on page 63, DOI: 10.11646/zootaxa.4902.1.1, http://zenodo.org/record/4419088
Cumulative Lactation and Onset of Hypertension in African-American Women
Creators: name: Stuebe, A.M
name: Rosenberg, L
name: Chetwynd, E.M
name: Rowley, D
name: Troester, M
name: Palmer, J.R
Publisher: name: The University of North Carolina at Chapel Hill University Libraries
Year: 2017

description: Hypertension affects nearly 1 of 3 women and contributes to cardiovascular disease, the leading cause of death in the United States. Breastfeeding leads to metabolic changes that could reduce risks of hypertension. Hypertension disproportionately affects black women, but rates of breastfeeding among black women lag behind those in the general population. In the BlackWomen'sHealthStudy (n = 59,001), we conducted a nested case-control analysis using unconditional logistic regression to estimate the association between breastfeeding and incident hypertension at ages 40-65 years using data collected from 1995 to 2011. Controls were frequency-matched 2:1 to 12,513 hypertensive women by age and questionnaire cycle. Overall, there was little evidence of association between ever breastfeeding and incident hypertension (odds ratio = 0.97, 95% confidence interval: 0.92, 1.02). However, age modified the relationship (P = 0.02): Breastfeedingwas associated with reduced risk of hypertension at ages 40-49 years (odds ratio = 0.92, 95%confidence interval: 0.85, 0.99) but not at older ages. In addition, risk of hypertension at ages 40-49 years decreased with increasing duration of breastfeeding (P for trend = 0.08). Our results suggest that long-duration breastfeeding may reduce the risk of incident hypertension in middle age. Addressing breastfeeding as a potential preventative health behavior is particularly compelling because it is required for only a discrete period of time.
Clanculus (Clanculus) pini Rubio & Rolan 2002
Creators: name: Harzhauser, Mathias
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Trochida
Trochidae
Clanculus
Clanculus pini

description: Clanculus (Clanculus) pini Rubio & Rolán, 2002
Present-day: E Atlantic Ocean (Senegal).
(Spadini 2006)
description: Published as part of Harzhauser, Mathias, 2021, The Cainozoic to present-day record of Circum-Mediterranean, NE Atlantic and North Sea Cantharidinae and Trochinae (Trochoidea, Gastropoda) - a synopsis, pp. 1-81 in Zootaxa 4902 (1) on page 63, DOI: 10.11646/zootaxa.4902.1.1, http://zenodo.org/record/4419088
MPEC 2025-A113 : 2025 AY1
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2025
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469
subject: 2025 AY1

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
Additional file 1 of A methodologic survey on use of the GRADE approach in evidence syntheses published in high-impact factor urology and nephrology journals
Creators: name: Zhang, Shuang
name: Wu, Qi-Jun
name: Liu, Shu-Xin
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Cell Biology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Science Policy

description: Supplementary file 1: Appendix 1. Search strategy. Table S1. Overview of SRs that applied GRADE inappropriately a by rating the certainty of evidence for all studies or each individual study. Table S2. Summary of the study characteristics and the number and type of (un)rated outcomes of systematic reviews (n = 49) that rated the outcome-specific certainty of evidence with GRADE. Table S3. Overview of the GRADE domains of systematic reviews that rated the outcome-specific certainty of evidence.
title: Assessing and Visualizing the Role of Long-Term Marine Observations in California State Agencies: A Case Study of the CalCOFI Program
Creators: name: Stella, Alexandra
name: Bowen, Lila
Publisher: name: California Cooperative Oceanic Fisheries Investigations (Program)
Year: 2024

description: This report will assess and illustrate the role of long-term marine ecosystem observing programs in state marine management and policy by focusing on the CalCOFI program. By analyzing and visualizing California state agencies’ use of CalCOFI efforts, this project examined the contributions of the program to the understanding of marine ecosystems and development of management and conservation policies.
Clanculus (Clanculus) pseudaraonis
Creators: name: Harzhauser, Mathias
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Trochida
Trochidae
Clanculus
Clanculus pseudaraonis

description: Clanculus (Clanculus) pseudaraonis (Strausz, 1960) †
Middle Miocene (Badenian): Central Paratethys Sea (Hungary).
(Strausz 1960, 1966)
description: Published as part of Harzhauser, Mathias, 2021, The Cainozoic to present-day record of Circum-Mediterranean, NE Atlantic and North Sea Cantharidinae and Trochinae (Trochoidea, Gastropoda) - a synopsis, pp. 1-81 in Zootaxa 4902 (1) on page 63, DOI: 10.11646/zootaxa.4902.1.1, http://zenodo.org/record/4419088
Biomimetic Mg/Zn-based zeolitic-imidazole frameworks for zinc-air batteries: Disclosing the role of defective imidazole-Mg sites in the electrocatalytic performance
Creators: name: Cano, Manuel
name: Carrillo-Carrion, Carolina
name: Giner-Casares, Juan J.
Publisher: name: Zenodo
Year: 2025

description: The present dataset includes the complete experimental characterization of different Mg-doped ZIF-8, varying not only Mg/Zn ratio but also particle-size, using the following techniques: DLS, PXRD, ICP-OES, N2 adsorption-desorption isotherms, XPS, SEM and TEM. In addition, typical ORR electrochemical analysis under static and dynamic conditions (RDE and RRDE) as well as DFT calculations of the free energy adsorptions of the different adsorbates involved in the ORR mechanism and on the surface of the synthesized materials are included. Finally, the analysis of the best material in a real device, such as a zinc-air battery, is provided.
Additional file 1 of A qualitative descriptive study of a novel nurse-led skin cancer screening model in rural Australia
Creators: name: Glenister, Kristen
name: Witherspoon, Sophie
name: Crouch, Alan
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: Additional file 1. Semi-structured interview questions.
Clanculus (Clanculus) turriculatus Sacco 1896
Creators: name: Harzhauser, Mathias
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Trochida
Trochidae
Clanculus
Clanculus turriculatus

description: Clanculus (Clanculus) turriculatus Sacco, 1896 †
Pliocene (Piacenzian): Mediterranean Sea (Italy).
(Sacco 1896)
description: Published as part of Harzhauser, Mathias, 2021, The Cainozoic to present-day record of Circum-Mediterranean, NE Atlantic and North Sea Cantharidinae and Trochinae (Trochoidea, Gastropoda) - a synopsis, pp. 1-81 in Zootaxa 4902 (1) on page 63, DOI: 10.11646/zootaxa.4902.1.1, http://zenodo.org/record/4419088
title: Micropollutants in Antarctic waters
Creators: name: Emnet, Philipp
Publisher: name: Antarctic Environments Portal
Year: 2018

description: Thanks to improved analytical techniques chemicals used in personal care and pharmaceutical products are now amongst the most commonly detected compounds in surface waters worldwide. Collectively referred to as micropollutants, they include pharmaceuticals and ingredients from cosmetics, toothpastes, sunscreen, skin moisturisers, shampoos, analgesics and even recreational drugs. Micropollutants enter the aquatic environment predominantly via wastewater because conventional sewage treatment methods cannot completely remove them before the effluent is discharged. To date there have been only limited assessments on their presence and impacts in coastal environments. Experiments have shown that some of them can accumulate in sediments and biota and have endocrine disrupting effects on aquatic organisms. Micropollutants have been detected for the first time in Antarctica, in effluent from Scott Base, McMurdo Station and Mario Zucchelli Station, the surrounding sea water and sea ice, as well as in benthos, at similar concentrations to temperate coastal waters. Recent work around the Antarctic Peninsula has now found traces of fragrances, analgesics and anti-inflammatories in aquatic systems.
description: Pollution
PPCPs
Sewage
Wastewater
Additional file 1 of Expression of unfolded protein response genes in post-transplantation liver biopsies
Creators: name: Liu, Xiaoying
name: Taylor, Sarah A.
name: Celaj, Stela
name: Levitsky, Josh
name: Green, Richard M.
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1. Individual patient characteristics.
cMET inhibitor crizotinib impairs angiogenesis and reduces tumor burden in the C3(1)-Tag model of basal-like breast cancer
Creators: name: McNaughton, K.K
name: Essaid, L
name: Sundaram, S
name: Darr, D.B
name: Zattra, O
name: Makowski, L
name: Ezzell, J.A
name: Montgomery, S.A
name: Freemerman, A.J
name: Cozzo, A.J
name: Qin, Y
name: Troester, M.A
name: Galanko, J.A
Publisher: name: The University of North Carolina at Chapel Hill University Libraries
Year: 2016

description: Epidemiologic studies have associated obesity with increased risk of the aggressive basal-like breast cancer (BBC) subtype. Hepatocyte growth factor (HGF) signaling through its receptor, cMET, is elevated in obesity and is a pro-tumorigenic pathway strongly associated with BBC. We previously reported that high fat diet (HFD) elevated HGF, cMET, and phospho-cMET in normal mammary gland, with accelerated tumor development, compared to low fat diet (LFD)-fed lean controls in a murine model of BBC. We also showed that weight loss resulted in a significant reversal of HFD-induced effects on latency and elevation of HGF/cMET signaling in normal mammary and cMET in normal mammary and tumors. Here, we sought to inhibit BBC tumor progression in LFD- and HFD-fed C3(1)-Tag BBC mice using a small molecule cMET inhibitor, and began crizotinib treatment (50 mg/kg body weight by oral gavage) upon identification of the first palpable tumor. We next investigated if administering crizotinib in a window prior to tumor development would inhibit or delay BBC tumorigenesis. Treatment: Crizotinib significantly reduced mean tumor burden by 27.96 and 37.29 %, and mean tumor vascularity by 35.04 and 33.52 %, in our LFD- and HFD-fed C3(1)-Tag BBC mice, respectively. Prevention: Crizotinib significantly accelerated primary tumor progression in both diet groups but had no effect on total tumor progression or total tumor burden. In sum, cMET inhibition by crizotinib limited tumor development and microvascular density in basal-like tumor-bearing mice but did not appear to be an effective preventive agent for BBC.
Clanculus (Clanculus) verai Lozano-Francisco & Vera-Pelaez 2002
Creators: name: Harzhauser, Mathias
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Trochida
Trochidae
Clanculus
Clanculus verai

description: Clanculus (Clanculus) verai Lozano-Francisco & Vera-Peláez, 2002 †
= Calliostoma margarita Lozano-Francisco & Vera-Peláez, 2002
Pliocene (Zanclean): Mediterranean Sea (Spain: Estepona)
(Landau et al. 2003).
Note
Eucyclus infraeocaenicus Cossmann, 1892 from the Thanetian of France, listed by Le Renard & Pacaud (1995) as Clanculus, is most likely unrelated with this genus (see Cossmann & Pissarro 1907, pl. 3, 21-2).
Clanculus subjussieui Almera, 1894 and Clanculus subjussieui var. alternans Almera, 1894, from the Pliocene of Spain are excluded herein from Clanculus. The status of these taxa needs revision.
description: Published as part of Harzhauser, Mathias, 2021, The Cainozoic to present-day record of Circum-Mediterranean, NE Atlantic and North Sea Cantharidinae and Trochinae (Trochoidea, Gastropoda) - a synopsis, pp. 1-81 in Zootaxa 4902 (1) on page 63, DOI: 10.11646/zootaxa.4902.1.1, http://zenodo.org/record/4419088
MPEC 2025-A114 : 2025 AZ1
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2025
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469
subject: 2025 AZ1

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
Disability health training: unpacking power dynamics by listening to lived experience
Creators: name: Quinn, Elizabeth (Libby)
name: Eppelsheimer, Rhonda
Publisher: name: Oregon Health and Science University
Year: 2024
Subjects: subject: Education, Medical
subject: Health Education
subject: Patient-Centered Care
subject: Disabled Persons
subject: Stereotyping
subject: Students, Medical
subject: Health Services Accessibility
subject: Patient Care
subject: power-sharing

description: According to a survey of 234 OHSU medical students, 87.4% of respondents disagreed when asked if the OHSU curriculum adequately covered disability and 72.4% disagreed that the OHSU curriculum prepared students to work with PWD in clinical rotations. In response to these findings, OHSU launched a first-of-its kind 10-week disability elective at the School of Medicine in 2022. Pre- and post-elective student surveys demonstrated self-reported improvements in comfort, attitudes, and clinical competency working with PWD after completion of the course. This workshop aims to address and begin to dismantle implicit biases held by healthcare providers (HCPs) about their patients with disabilities (PWD). By bringing awareness to the impact of power dynamics in healthcare provision, both within individual clinical relationships as well as through the systematic reinforcement of stereotypes and stigmatization, HCPs can develop practices to create stronger partnerships with PWD and improve health outcomes. Educators who attend will be able to embed these elements into teaching sessions that they develop.
Additional file 2 of Expression of unfolded protein response genes in post-transplantation liver biopsies
Creators: name: Liu, Xiaoying
name: Taylor, Sarah A.
name: Celaj, Stela
name: Levitsky, Josh
name: Green, Richard M.
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 2. Hepatic unfolded protein response gene expression correlated with serum ALT.
Clanculus (Clanculopsis) Monterosato 1880
Creators: name: Harzhauser, Mathias
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Trochida
Trochidae
Clanculus

description: Subgenus Clanculopsis Monterosato, 1880
Type species. Trochus cruciatus Linnaeus, 1758, SD (Sacco 1896: 21); present-day, Mediterranean Sea.
Diagnosis. Shell shape and sculpture like Clanculus (Clanculus); basal columella tooth simple, uppermost ridge on interior of outer lip not significantly larger than other labral ridges and not produced to form an anal tooth; apertural dentition less well developed than that of Clanculus s. s. and parietal ridges rarely prominent; inner portion of umbilicus filled with callus deposit (Herbert 1993).
Remarks. The oldest records of this group in Europe dates back to the Chattian of the NE Atlantic. During the middle Miocene it appears with several species also in the Proto-Mediterranea and the Paratethys seas.
= Clanculella Sacco, 1896, type species: Monodonta jussieui Payraudeau, 1826, OD (Sacco 1896: 22). Present-day, Mediterranean Sea.
= Granulifera Anistratenko, 2000, type species: Granulifera pulla Anistratenko, 2000, OD (Anistratenko 2000: 4). Middle Miocene, Ukraine.
description: Published as part of Harzhauser, Mathias, 2021, The Cainozoic to present-day record of Circum-Mediterranean, NE Atlantic and North Sea Cantharidinae and Trochinae (Trochoidea, Gastropoda) - a synopsis, pp. 1-81 in Zootaxa 4902 (1) on pages 63-64, DOI: 10.11646/zootaxa.4902.1.1, http://zenodo.org/record/4419088
Additional file 3 of Expression of unfolded protein response genes in post-transplantation liver biopsies
Creators: name: Liu, Xiaoying
name: Taylor, Sarah A.
name: Celaj, Stela
name: Levitsky, Josh
name: Green, Richard M.
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 3. Hepatic unfolded protein response gene expression correlated with serum AST.
กลยุทธ์การประชาสัมพันธ์ผ่านสื่อสังคมออนไลน์
Creators: name: สุนิสา ประวิชัย
Publisher: name: สถาบันวิจัยและพัฒนา มหาวิทยาลัยสุโขทัยธรรมาธิราช
Year: 2017
Subjects: การประชาสัมพันธ์
กลยุทธ์
สื่อสังคมออนไลน์

description: วารสารอิเล็กทรอนิกส์การเรียนรู้ทางไกลเชิงนวัตกรรม, 7, 2, 1 - 13