Additional file 1 of Aggregation tests identify new gene associations with breast cancer in populations with diverse ancestry
Creators: name: Mueller, Stefanie H.
name: Lai, Alvina G.
name: Valkovskaya, Maria
name: Michailidou, Kyriaki
name: Bolla, Manjeet K.
name: Wang, Qin
name: Dennis, Joe
name: Lush, Michael
name: Abu-Ful, Zomoruda
name: Ahearn, Thomas U.
name: Andrulis, Irene L.
name: Anton-Culver, Hoda
name: Antonenkova, Natalia N.
name: Arndt, Volker
name: Aronson, Kristan J.
name: Augustinsson, Annelie
name: Baert, Thais
name: Freeman, Laura E. Beane
name: Beckmann, Matthias W.
name: Behrens, Sabine
name: Benitez, Javier
name: Bermisheva, Marina
name: Blomqvist, Carl
name: Bogdanova, Natalia V.
name: Bojesen, Stig E.
name: Bonanni, Bernardo
name: Brenner, Hermann
name: Brucker, Sara Y.
name: Buys, Saundra S.
name: Castelao, Jose E.
name: Chan, Tsun L.
name: Chang-Claude, Jenny
name: Chanock, Stephen J.
name: Choi, Ji-Yeob
name: Chung, Wendy K.
name: Colonna, Sarah V.
name: Cornelissen, Sten
name: Couch, Fergus J.
name: Czene, Kamila
name: Daly, Mary B.
name: Devilee, Peter
name: Dörk, Thilo
name: Dossus, Laure
name: Dwek, Miriam
name: Eccles, Diana M.
name: Ekici, Arif B.
name: Eliassen, A. Heather
name: Engel, Christoph
name: Evans, D. Gareth
name: Fasching, Peter A.
name: Fletcher, Olivia
name: Flyger, Henrik
name: Gago-Dominguez, Manuela
name: Gao, Yu-Tang
name: García-Closas, Montserrat
name: García-Sáenz, José A.
name: Genkinger, Jeanine
name: Gentry-Maharaj, Aleksandra
name: Grassmann, Felix
name: Guénel, Pascal
name: Gündert, Melanie
name: Haeberle, Lothar
name: Hahnen, Eric
name: Haiman, Christopher A.
name: Håkansson, Niclas
name: Hall, Per
name: Harkness, Elaine F.
name: Harrington, Patricia A.
name: Hartikainen, Jaana M.
name: Hartman, Mikael
name: Hein, Alexander
name: Ho, Weang-Kee
name: Hooning, Maartje J.
name: Hoppe, Reiner
name: Hopper, John L.
name: Houlston, Richard S.
name: Howell, Anthony
name: Hunter, David J.
name: Huo, Dezheng
name: Ito, Hidemi
name: Iwasaki, Motoki
name: Jakubowska, Anna
name: Janni, Wolfgang
name: John, Esther M.
name: Jones, Michael E.
name: Jung, Audrey
name: Kaaks, Rudolf
name: Kang, Daehee
name: Khusnutdinova, Elza K.
name: Kim, Sung-Won
name: Kitahara, Cari M.
name: Koutros, Stella
name: Kraft, Peter
name: Kristensen, Vessela N.
name: Kubelka-Sabit, Katerina
name: Kurian, Allison W.
name: Kwong, Ava
name: Lacey, James V.
name: Lambrechts, Diether
name: Le Marchand, Loic
name: Li, Jingmei
name: Linet, Martha
name: Lo, Wing-Yee
name: Long, Jirong
name: Lophatananon, Artitaya
name: Mannermaa, Arto
name: Manoochehri, Mehdi
name: Margolin, Sara
name: Matsuo, Keitaro
name: Mavroudis, Dimitrios
name: Menon, Usha
name: Muir, Kenneth
name: Murphy, Rachel A.
name: Nevanlinna, Heli
name: Newman, William G.
name: Niederacher, Dieter
name: O’Brien, Katie M.
name: Obi, Nadia
name: Offit, Kenneth
name: Olopade, Olufunmilayo I.
name: Olshan, Andrew F.
name: Olsson, Håkan
name: Park, Sue K.
name: Patel, Alpa V.
name: Patel, Achal
name: Perou, Charles M.
name: Peto, Julian
name: Pharoah, Paul D. P.
name: Plaseska-Karanfilska, Dijana
name: Presneau, Nadege
name: Rack, Brigitte
name: Radice, Paolo
name: Ramachandran, Dhanya
name: Rashid, Muhammad U.
name: Rennert, Gad
name: Romero, Atocha
name: Ruddy, Kathryn J.
name: Ruebner, Matthias
name: Saloustros, Emmanouil
name: Sandler, Dale P.
name: Sawyer, Elinor J.
name: Schmidt, Marjanka K.
name: Schmutzler, Rita K.
name: Schneider, Michael O.
name: Scott, Christopher
name: Shah, Mitul
name: Sharma, Priyanka
name: Shen, Chen-Yang
name: Shu, Xiao-Ou
name: Simard, Jacques
name: Surowy, Harald
name: Tamimi, Rulla M.
name: Tapper, William J.
name: Taylor, Jack A.
name: Teo, Soo Hwang
name: Teras, Lauren R.
name: Toland, Amanda E.
name: Tollenaar, Rob A. E. M.
name: Torres, Diana
name: Torres-Mejía, Gabriela
name: Troester, Melissa A.
name: Truong, Thérèse
name: Vachon, Celine M.
name: Vijai, Joseph
name: Weinberg, Clarice R.
name: Wendt, Camilla
name: Winqvist, Robert
name: Wolk, Alicja
name: Wu, Anna H.
name: Yamaji, Taiki
name: Yang, Xiaohong R.
name: Yu, Jyh-Cherng
name: Zheng, Wei
name: Ziogas, Argyrios
name: Ziv, Elad
name: Dunning, Alison M.
name: Easton, Douglas F.
name: Hemingway, Harry
name: Hamann, Ute
name: Kuchenbaecker, Karoline B.
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1:Table S1. Cohort Descriptives. Table S2. Included BCAC studies. Table S3. Number of genes analysed per cohort. Table S4. Genomic inflation in burden analysis. Table S5. Model covariates per cohort. Figure S1. QQ-plots of burden analysis. Figure S2. QQ-plots for meta-analysis. Figure S3. Regional plots for significantly associated genes. FAM72B, SRGAP2C, AC058822.1, ABRAXAS1, MAP3K1, MIER3, BTN2A1, FGFR2, TNNT3, LSP1, LYPD5, KCNN4, ZNF404. Table S6. All Cohort Meta-Analysis. Table S7. Suggestive Associations in Diverse Ancestries. Table S8. Prior Evidence for Suggestive Associations in Diverse Ancestries. Figure S4. Regional plot for gene ESR1. Figure S5. Regional plot for gene CBLB. Table S9. Ethics committees that provided approval for the contributing studies.