cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1: of Geographic information system data from ambulances applied in the emergency department: effects on patient reception
Creators: name: Raaber, Nikolaj
name: Duvald, Iben
name: Riddervold, Ingunn
name: Christensen, Erika
name: Kirkegaard, Hans
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Screen shot of GIS application used in Regional Hospital Horsens. (PDF 396Â kb)
Additional file 2: of Structured follow-up by general practitioners after deliberate self-poisoning: a randomised controlled trial
Creators: name: TK Grimholt
name: D. Jacobsen
name: OR Haavet
name: L. Sandvik
name: T. Jorgensen
name: AB Norheim
name: O. Ekeberg
Publisher: name: Figshare
Year: 2015
Subjects: subject: Cell Biology
subject: Neuroscience
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Marine Biology
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Plant Biology
subject: FOS: Biological sciences

description: Europep questionnaire. (PDF 38Â kb)
Additional file 2: of Geographic information system data from ambulances applied in the emergency department: effects on patient reception
Creators: name: Raaber, Nikolaj
name: Duvald, Iben
name: Riddervold, Ingunn
name: Christensen, Erika
name: Kirkegaard, Hans
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Science Policy

description: Interview guide used for semi-structured interviews with coordinating nurses at RHHâ  s ED. (PDF 14Â kb)
Additional file 7: of Expansion of the phosphatidylethanolamine binding protein family in legumes: a case study of Lupinus angustifolius L. FLOWERING LOCUS T homologs, LanFTc1 and LanFTc2
Creators: name: MichaĹ KsiÄ Ĺźkiewicz
name: Rychel, Sandra
name: Nelson, Matthew
name: Wyrwa, Katarzyna
name: Naganowska, Barbara
name: Wolko, Bogdan
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Sequence homology links identified between linkage groups NLL-10 and NLL-17 and legume genomes. (DOC 3709 kb)
Additional file 1: of Nosocomial infection control in healthcare settings: Protection against emerging infectious diseases
Creators: name: Chuanxi Fu
name: Shengyong Wang
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Multilingual abstracts in the five official working languages of the United Nations. (PDF 322 kb)
Additional file 1: of Intravenous magnesium sulfate for the management of severe hand, foot, and mouth disease with autonomic nervous system dysregulation in Vietnamese children: study protocol for a randomized controlled trial
Creators: name: Qui, Phan
name: Khanh, Truong
name: Trieu, Huynh
name: PháşĄm Giang
name: Nguyen Bich
name: Thoa, Le
name: Nhan, Le
name: Saraswathy Sabanathan
name: Doorn, Rogier Van
name: Nguyen Toan
name: Merson, Laura
name: Nguyen Dung
name: Khanh, Lam
name: Wolbers, Marcel
name: Nguyen Hung
name: Nguyen Chau
name: Wills, Bridget
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: Computational Biology

description: Appendices: Please see details in separate appendices file. Appendix 1: Vietnamese MoH HFMD classification and management guidelines. Appendix 2: Suggested indications for specific interventions following Vietnamese MoH guidelines for HFMD. Appendix 3: Definitions for hypertension in the study population. Appendix 4: Additional study definitions. Appendix 5: Magnesium sulfate background information. Appendix 6: Rescue treatment guidelines. Appendix 7: Patient information sheet & informed consent form. Appendix 8: Study schedule for all planned investigations. Appendix 9: Laboratory schedule (clinical and research investigations). Appendix 10: Modified Adverse Events Grading for HFMD trial. (DOCX 193 kb)
Gated Low-rank Adaptation for personalized Code-Switching Automatic Speech Recognition on the low-spec devices
Creators: name: Kim, Gwantae
name: Lee, Bokyeung
name: Kim, Donghyeon
name: Ko, Hanseok
Publisher: name: arXiv
Year: 2024
Subjects: subject: Audio and Speech Processing (eess.AS)
subject: Artificial Intelligence (cs.AI)
subject: Computation and Language (cs.CL)
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: FOS: Computer and information sciences

description: In recent times, there has been a growing interest in utilizing personalized large models on low-spec devices, such as mobile and CPU-only devices. However, utilizing a personalized large model in the on-device is inefficient, and sometimes limited due to computational cost. To tackle the problem, this paper presents the weights separation method to minimize on-device model weights using parameter-efficient fine-tuning methods. Moreover, some people speak multiple languages in an utterance, as known as code-switching, the personalized ASR model is necessary to address such cases. However, current multilingual speech recognition models are limited to recognizing a single language within each utterance. To tackle this problem, we propose code-switching speech recognition models that incorporate fine-tuned monolingual and multilingual speech recognition models. Additionally, we introduce a gated low-rank adaptation(GLoRA) for parameter-efficient fine-tuning with minimal performance degradation. Our experiments, conducted on Korean-English code-switching datasets, demonstrate that fine-tuning speech recognition models for code-switching surpasses the performance of traditional code-switching speech recognition models trained from scratch. Furthermore, GLoRA enhances parameter-efficient fine-tuning performance compared to conventional LoRA.
description: Table 2 is revised
Electrochemical in situ investigation of thiolate DNA monolayers on gold with fluorescence imaging
Creators: name: Murphy, Jeffrey N.
Publisher: name: University of British Columbia
Year: 2008

description: DNA-modified surfaces have been widely studied for microarray and biosensor applications, in particular sequence-specific detection of DNA, for which electrochemical and optical signs can be produced. Variations in the organization and surface density of adsorbed DNA are known to affect the sensitivity and reliability of assays performed using such surfaces, however most measurements of such surfaces to date have little to no spatial resolution, limiting the information that can be gathered regarding the heterogeneity of the organization of adsorbed DNA molecules. We have applied in situ epi-fluorescence microscopic imaging in conjunction with electrochemical measurements to fluorescently labelled thiolate DNA, adsorbed on polycrystalline gold electrodes with a mercaptohexanol (MCH) passive layer. Spatially resolved information on the organization of adsorbed DNA on the surface is gathered within an area measuring 520by 730micrometres with a 0.96 micrometre resolution. The technique has enabled us to investigate "hotspots" (regions of anomalously bright fluorescence) and regional variation in fluorescence; since molecular fluorescence is quenched as a function of distance from the metal substrate, potential modulation with consequent DNA reorientation or layer specificity of the adsorption. Furthermore, an alternative means to the conventional preparation of thiolate-DNA / MCH monolayers has been developed. In this new method, a gold substrate passivated with MCH is subsequently immersed in an aqueous solution of 5'hexylthiol modified DNA. Through a ligand exchange process, DNA is immobilized forming a mixed MCH / DNA monolayer. Samples prepared via the new method display fewer hotspots and improved fluorescence switching of the DNA during electromodulation for samples made with single stranded (ss) DNA and with double stranded (ds) DNA. Measurement of the DNA surface concentration using ruthenium (III) hexaammine chloride with cyclic voltammetry for self assembled monolayers (SAMs) prepared via the new method are on the order of 1% of the maximum grafting density obtainable for both ssDNA and dsDNA by conventional methods.
Additional file 2: of Experiences of nurse practitioners and medical practitioners working in collaborative practice models in primary healthcare in Australia â   a multiple case study using mixed methods
Creators: name: Schadewaldt, Verena
name: McInnes, Elizabeth
name: Hiller, Janet
name: Gardner, Anne
Publisher: name: Figshare
Year: 2016
Subjects: subject: Pharmacology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Interview Schedule for Medical Practitioners (PDF 72 kb)
Additional file 1 of Reduction, alignment and visualisation of large diverse sequence families
Creators: name: Taylor, William
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Supplementary information. (PDF 80 kb)
Additional file 3: Table S4. of Global DNA methylation patterns in Barrett’s esophagus, dysplastic Barrett’s, and esophageal adenocarcinoma are associated with BMI, gender, and tobacco use
Creators: name: Kaz, Andrew
name: Chao-Jen Wong
name: Varadan, Vinay
name: Willis, Joseph
name: Chak, Amitabh
name: Grady, William
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Plant Biology

description: GO terms represented in DM genes comparing BE smokers vs. nonsmokers. (DOC 28 kb)
MOESM1 of Direct conversion of theophylline to 3-methylxanthine by metabolically engineered E. coli
Creators: name: Algharrawi, Khalid
name: Summers, Ryan
name: Sridhar Gopishetty
name: Subramanian, Mani
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Table S1. Prices of various natural methylxanthines obtained from the Sigma–Aldrich website on 18 September, 2015. Table S2. Estimated copy number of ndmA and ndmD genes in strains used in this study. Table S3. Comparison of growth and activity of resting cell suspensions of strains pDdA, pDdAA, and pAD1dDD. Concentrations of TP, 3MX, and 1MX after 90 min are reported as means with standard deviations of triplicate reactions. Table S4. Comparison of growth and activity of resting cell suspension of strain pDdA grown in LB and SB. Concentrations of TP, 3MX, and 1MX after 2 h are reported as means with standard deviations of triplicate reactions. Figure S1. Maps of plasmids in strains used to produce 3MX from TP. ori_pBR322, pBR322 origin of replication; ori_P15A, P15A origin of replication; Amp-R, ampicillin resistance gene, Kan-R, kanamycin resistance gene, CAT, chloramphenicol resistance gene, ndmA, N1-demethylase gene; ndmD, N-demethylase reductase gene; His-ndmD, N-terminal His6-tagged N-demethylase reductase gene; T7, T7 promoter. Plasmids beginning with “p” use pET backbones, plasmids beginning with “d” use the pACYCDuet-1 plasmid backbone. Figure S2. SDS-PAGE analysis of ndmA and ndmD expression in metabolically engineered strains of E. coli. A total of 10 μg protein was loaded into each well. Molecular weights of markers (in kDa) are shown to the left of the gel. Blue arrows indicate NdmA and NdmD protein bands. Lane 1, pAD1 soluble fraction; lane 2, pAD1 insoluble fraction; lane 3, pDdA soluble fraction; lane 4, pDdA insoluble fraction; lane 5, BL21(DE3) soluble fraction (negative control); lane 6, molecular weight standard; lane 7, pAD1DD soluble fraction; lane 8, pAD1DD insoluble fraction; lane 9, pDdAA soluble fraction; lane 10, pDdAA insoluble fraction. Figure S3. Separation of 3MX and 1MX by preparative chromatography. Retention times of 3MX and 1MX are 116 and 135 min, respectively. Figure S4. NMR of 3-methylxanthine. (A) NMR of 3MX standard obtained from Sigma Aldrich. (B) NMR of biologically produced and purified 3MX sample produced in this work
Additional file 1: of Experiences of nurse practitioners and medical practitioners working in collaborative practice models in primary healthcare in Australia â   a multiple case study using mixed methods
Creators: name: Schadewaldt, Verena
name: McInnes, Elizabeth
name: Hiller, Janet
name: Gardner, Anne
Publisher: name: Figshare
Year: 2016
Subjects: subject: Pharmacology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Interview Schedule for Nurse Practitioners (PDF 71 kb)
Additional file 4: Table S5. of Global DNA methylation patterns in Barrett’s esophagus, dysplastic Barrett’s, and esophageal adenocarcinoma are associated with BMI, gender, and tobacco use
Creators: name: Kaz, Andrew
name: Chao-Jen Wong
name: Varadan, Vinay
name: Willis, Joseph
name: Chak, Amitabh
name: Grady, William
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Science Policy
subject: Plant Biology
subject: 60506 Virology

description: GO terms represented in DM genes comparing HGD/EAC smokers vs. nonsmokers. (DOC 28 kb)
Additional file 1: of The Antarctic Circumpolar Current as a diversification trigger for deep-sea octocorals
Creators: name: Dueñas, Luisa
name: Tracey, Dianne
name: Crawford, Andrew
name: Wilke, Thomas
name: Alderslade, Phil
name: Sánchez, Juan
Publisher: name: Figshare
Year: 2016
Subjects: subject: Molecular Biology
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified

description: MIGRATE-N runs showing the log-probability of the data given the model (marginal likelihood). The runs evaluated the following migration models: I) all localities form a single panmictic population; II) three-population model; III) four-population model. The first row represents the number of parameters used for a particular model. The second row shows the symbol specification for the migration matrix given to MIGRATE-N, where and asterisk represents an estimated parameter and a zero a non-estimated parameter. The third row provides the log marginal likelihood for each model obtained by thermodynamic integration. The forth row reports the log Bayes Factor (LBF). The row ‘Choice’ orders the models based on the LBF, and finally, the sixth row shows the probability for each model. Populations are labelled as follows: T for Tasmania, MQ for Macquarie Ridge, NZ for New Zealand, and A for Antarctica. (DOCX 126 kb)
Additional file 4: Table S3. of Genome-wide identification and characterization of auxin response factor (ARF) family genes related to flower and fruit development in papaya (Carica papaya L.)
Creators: name: Kaidong Liu
name: Changchun Yuan
name: Haili Li
name: Wanhuang Lin
name: Yanjun Yang
name: Chenjia Shen
name: Xiaolin Zheng
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Data of amino acid content in MR domain of CpARFs. (DOCX 19Â kb)
Additional file 13: Table S9. of Genome-wide identification and characterization of auxin response factor (ARF) family genes related to flower and fruit development in papaya (Carica papaya L.)
Creators: name: Kaidong Liu
name: Changchun Yuan
name: Haili Li
name: Wanhuang Lin
name: Yanjun Yang
name: Chenjia Shen
name: Xiaolin Zheng
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: The information of ARF family gene in Arabidopsis and rice. (DOCX 18Â kb)
Additional file 3: of The Antarctic Circumpolar Current as a diversification trigger for deep-sea octocorals
Creators: name: Dueñas, Luisa
name: Tracey, Dianne
name: Crawford, Andrew
name: Wilke, Thomas
name: Alderslade, Phil
name: Sánchez, Juan
Publisher: name: Figshare
Year: 2016
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified

description: Ancestral character state reconstruction for the locality of the bottlebrush octocorals through a maximum likelihood approach. This analysis was run under a symmetric rate model using the packages ‘phytools’ [107] and ‘geiger’ [108] in R. Pie diagrams at nodes represent probabilities for each state, and the colours correspond to the localities: red for Tasmania, green for New Zealand, orange for Macquarie Ridge, and blue for Antarctica. Notice that for nodes A, B, and C the ancestral locality reconstruction is unresolved. (DOCX 153 kb)
Additional file 1: Table S1. of Genome-wide identification and characterization of auxin response factor (ARF) family genes related to flower and fruit development in papaya (Carica papaya L.)
Creators: name: Kaidong Liu
name: Changchun Yuan
name: Haili Li
name: Wanhuang Lin
name: Yanjun Yang
name: Chenjia Shen
name: Xiaolin Zheng
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology

description: The nucleic acid sequences of CpARF family genes. (DOCX 23Â kb)
An unusually stable chiral ethyl zinc complex : reactivity and polymerization of lactide
Creators: name: Labourdette, Guillaume
Publisher: name: University of British Columbia
Year: 2008

description: The racemic (±)-2,4-di-tert-butyl-6-(((2-(dimethylamino)cyclohexyl)(methyl) amino)methyl)phenol ((±)-(NNMeOtBu)H), (±)-2,4-di-tert-butyl-6-((2-(dimethylamino) cyclohexylamino)methyl)phenol ((±)-(NNHOtBu)H), and (±)-2-(((2-(dimethylamino) cyclohexyl)(methyl)amino) methyl)phenol ((±)-(NNMeOH)H) are chiral ancillary NNO proligands, which synthesis was adapted from a published procedure. Reaction of (±)-(NNMeOtBu)H ((±)-2), (±)-(NNMeOH)H ((±)-3) and (±)-(NNHOtBu)H ((±)-1) with ZnEt2 successfully yielded the corresponding zinc ethyl complexes (±)-5, (±)-6 and (±)-7 respectively; the enantiomerically pure (R,R)-5 was synthesized from (R,R)-2. NMR spectroscopy experiments and X-ray crystallography allowed identification of two stereoisomers for (±)-5, which were observed in solution and in the solid state. The two stereoisomers, 5-α and 5-β, are in equilibrium in solution, with 5-β being thermodynamically favored. The zinc ethyl complexes were found to be unreactive towards weakly acidic alcohols (methanol, ethanol, isopropanol). However, the zinc chloride complex (±)-(NNMeOtBu)ZnCl ((±)-8) and the zinc phenoxide (NNMeOtBu)ZnOPh ((±)-9 and (R,R)-9) could be isolated and characterized. Comparison of the reactivity of both (±)-5 and the reported L₁ZnEt (L₁ = 2,4-di-tert-butyl-6- {[(2'-dimethylaminoethyl) methylamino]methyl}phenolate) in presence of pyridine led to the proposal of a dissociative mechanism explaining the fundamental difference between the two zinc ethyl species. Polymerization of rac-lactide catalyzed by 9 showed that the complex, in its racemic or enantiomerically pure version, has a slow activity and is not stereoselective.
Additional file 1: Table S1. of Collective agency and the concept of ‘public’ in public involvement: A practice-oriented analysis
Creators: name: Hainz, Tobias
name: Bossert, Sabine
name: Strech, Daniel
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Science Policy

description: The discursive dilemma in biobanking. This additional file provides further information on a theoretical problem in judgment aggregation, known as the ‘discursive dilemma’. First, the discursive dilemma will be introduced in a context-neutral way before its relevance will be demonstrated in an example referring to the context of biobanking [61, 62]. (DOCX 17.4 kb)
Additional file 3: Table S2. of Genome-wide identification and characterization of auxin response factor (ARF) family genes related to flower and fruit development in papaya (Carica papaya L.)
Creators: name: Kaidong Liu
name: Changchun Yuan
name: Haili Li
name: Wanhuang Lin
name: Yanjun Yang
name: Chenjia Shen
name: Xiaolin Zheng
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Domain positions in 11 CpARF proteins. (DOCX 16Â kb)
Additional file 1: of Progranulin promotes peripheral nerve regeneration and reinnervation: role of notch signaling
Creators: name: Altmann, Christine
name: Vasic, Verica
name: Hardt, Stefanie
name: Heidler, Juliana
name: HĂ¤Ussler, Annett
name: Wittig, Ilka
name: Schmidt, Mirko
name: Tegeder, Irmgard
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Supplementary Figures. (DOCX 3067Â kb)
Additional file 7: of SNP-markers in Allium species to facilitate introgression breeding in onion
Creators: name: Scholten, Olga
name: Kaauwen, Martijn Van
name: Shahin, Arwa
name: Hendrickx, Patrick
name: L.C. Keizer
name: Burger, Karin
name: Heusden, Adriaan Van
name: C. Van Der Linden
name: Vosman, Ben
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Plant Biology
subject: Computational Biology

description: Figure S1. Aligned genetic maps of the CCxRF (left) and the F2(CxR) populations (right). (DOCX 201Â kb)
Data-driven Approaches to Improving EUI Prediction Accuracy for Benchmarking
Creators: name: Guo, Bingtong
Publisher: name: Carnegie Mellon University
Year: 2024
Subjects: Building Science and Techniques

description:  Approximately 40% of global energy consumption and 42% of global carbon emissions are  attributed to the building sector. Data-driven benchmarking, known for its precision and efficiency,  is crucial in supervising energy use and incentivizing efficiency over time. A vital component of  this approach, energy use intensity (EUI) prediction, currently relies heavily on multi-linear  regression. However, this method has been widely questioned for its reliability in predicting EUI.  Consequently, numerous studies have introduced machine learning algorithms to improve the  accuracy of EUI predictions with data-driven benchmarking. Despite these efforts, there remains  a lack of comparative performance analysis across various algorithms. This thesis  comprehensively compares 9 machine learning algorithms—including multi-linear regression,  LASSO regression, Ridge regression, random forest, gradient boosting, XGBoost, support vector  machines, and LightGBM — on a national energy dataset comprising 66,050 buildings across 18  building types and seven climate zones. It examines the accuracy of different ML algorithms in  EUI prediction and explores the relationships between algorithm accuracy and factors such as  building type and climate zone. The thesis then demonstrates the application steps in the use of the  most accurate algorithms for benchmarking with greater accuracy than linear regression. This  research serves as a reference to enhance the reliability of future data-driven benchmarking by  selectively employing the most appropriate algorithms based on building type and climate.
Additional file 1: of Modelling estimates of the burden of Respiratory Syncytial virus infection in adults and the elderly in the United Kingdom
Creators: name: Fleming, Douglas
name: Taylor, Robert
name: Lustig, Roger
name: Schuck-Paim, Cynthia
name: Franรงois Haguinet
name: Webb, David
name: Logie, John
name: Gonรงalo Matias
name: Taylor, Sylvia
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology

description: CPRD Coding Definitions. (DOCX 512 kb)
Additional file 1 of Downregulation of HNRNPA1 induced neoantigen generation via regulating alternative splicing
Creators: name: Sun, Yaoqi
name: Xiong, Bing
name: Shuai, Xueqian
name: Li, Jiale
name: Wang, Chunyan
name: Guo, Jing
name: Cheng, Zhongping
name: Liu, Shupeng
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Supplementary Material 1
Additional file 3: of The economic burden of urinary tract infections in women visiting general practices in France: a cross-sectional survey
Creators: name: M. FranĂ§Ois
name: T. Hanslik
name: B. Dervaux
name: Y. Le Strat
name: C. Souty
name: S. Vaux
name: S. Maugat
name: C. Rondet
name: M. Sarazin
name: B. Heym
name: B. Coignard
name: L. Rossignol
Publisher: name: Figshare
Year: 2016
Subjects: subject: Cell Biology
subject: Biotechnology
subject: Developmental Biology
subject: Marine Biology
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Follow-up questionnaire. (DOC 108Â kb)
WHICH FACTORS (QUALITY OF WORK LIFE AND PSYCHOLOGICAL CAPITAL) ARE MORE POWERFUL TO ENHANCE ORGANIZATIONAL CITIZENSHIP BEHAVIOR EMPLOYEE IN LA PATARAI HOSPITAL BARRU
Creators: name: Halijah
name: Andi Indahwaty AS
name: Irwandy
name: Syahrir Andi Pasinringi
name: Fridawati Rivai
name: Nurmala Sari
Publisher: name: Zenodo
Year: 2024
Subjects: Quality of Work Life, Psychological Capital, Organizational Citizenship Behavior, Hospital, Employee's.

description: Abstract

This research aims to identify which factors among QWL and Psycap are having the most powerful influence on employee's OCB in La Patarai Hospital, Barru. The type of research used is quantitative research with a cross-sectional design. The population in this study were employees of La Patarai Barru Hospital, totaling 484 people. The sample in this study were employees at La Patarai Barru Hospital using the Slovin formula which amounted to 220 people. The statistics test in this research used is chi-square to see the effect of quality of work life and psychological capital on organizational citizenship behavior and multiple logistic regression to see which variable has the most influence on organizational citizenship behavior. To search the variable with the highest influences use Exp (B) or OR (Odd Ratio) value. Data collection was carried out using a research instrument in the form of which had been tested for validity and reliability which showed that the questionnaire was valid and reliable so that it could be used. The results showed an effect of quality of work life (p=0.01) on the organizational citizenship behavior of La Patarai Hospital employees, and there is an effect of psychological capital on the organizational citizenship behavior of La Patarai Hospital employees (p=0.00). There is an effect of quality of work life (p=0.01) on the organizational citizenship behavior of La Patarai Hospital employees. There is an effect of psychological capital on the organizational citizenship behavior of employees of La Patarai Hospital (p=0.00). The variable that most influences the organizational citizenship behavior of La Patarai Hospital employees is psychological capital, the largest OR (Odds Ratio) = 4.609. Therefore, it is required to nurture the psychological capital including the individual stress level of the workforce is not too high, besides that, recruitment emphasizes the importance of conducting psychological tests so that it adapts to the work environment and workload in the hospital, where the workload and work environment are quite pressurized to be one of the critical consideration factors to be measured through psychological tests, therefore there are several important stages of employee selection, one of which is a psychological test.
Additional file 2: Figure S1. of Identification of a Latin American-specific BabA adhesin variant through whole genome sequencing of Helicobacter pylori patient isolates from Nicaragua
Creators: name: Thorell, Kaisa
name: Hosseini, Shaghayegh
name: GonzĂĄles, Reyna Palacios
name: Chatchai Chaotham
name: Graham, David
name: Paszat, Lawrence
name: Rabeneck, Linda
name: Lundin, Samuel
name: Intawat Nookaew
name: Ă Sa SjĂśling
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Altered selection pressure in South American BabA. Alignment of the Nicaraguan translated BabA sequences corresponding to the first 534 amino acids of the reference, ELS37 BabA. A consensus sequence from the multiple alignment is shown at the bottom where amino acids in red letters are identical in all the isolates and those with blue letters are shared in 90 % of the isolates. The SabA sequence from strain 26695 can be seen aligned at the top and Cyan-shaded cysteine residues are predicted to form disulphide bonds constraining the helices of the binding domain inferred from homology between the BabA and SabA proteins [62]. Similarly, positions shaded in yellow are identical in all SabA and BabA protein sequences (according to Pang et al.) while positions in bold red denotes residues that are identical between SabA and BabA and are predicted to be surface residues in the binding pocket of SabA. Under the ELS37 BabA sequence the Selecton results are shown, the upper line when calculating Ka/Ks based on all complete sequences plus the Nicaraguan sequences and the lower line when basing the Ka/Ks ratio only on the South American complete sequences and the Nicaraguan ones. Residues under no selection are white while residues under purifying selection are shown in red and those under positive selection are shown in shades of green. (PDF 250 kb)
Ice nucleation on uncoated and coated atmospheric mineral dust particles
Creators: name: Eastwood, Michael Logan
Publisher: name: University of British Columbia
Year: 2008

description: An optical microscope coupled to a flow cell was used to investigate ice nucleation on five atmospherically relevant mineral dusts at temperatures ranging from 233 to 247 K. Kaolinite and muscovite particles were found to be efficient ice nuclei in the deposition mode, requiring relative humidities with respect to ice (RHi) below 112% in order to initiate ice crystal formation. Quartz and calcite particles, by contrast, were poor ice nuclei, requiring relative humidities close to water saturation before ice crystals would form. Montmorillonite particles were efficient ice nuclei at temperatures below 241 K, but poor ice nuclei at higher temperatures. In several cases, there was a lack of quantitative agreement between these data and previously published work. This can be explained by several factors including mineral source, particle size, observation time and surface area available for nucleation. Heterogeneous nucleation rates (Jhet) were calculated from the onset data. Jhet values ranged from 60 to 1100 cm-²s-¹ for the five minerals studied. These values were then used to calculate contact angles (θ) for each mineral according to classical nucleation theory. The contact angles measured for kaolinite and muscovite ranged from 6 to 12º; for quartz and calcite the contact angles were much higher, ranging from 25 to 27º. The contact angles measured for montmorillonite were less than 15º at temperatures below 241 K, and above 20º at higher temperatures. The reported Jhet and θ values may allow for a more direct comparison between laboratory studies and can be used when modeling ice cloud formation in the atmosphere. The roles of H₂SO₄ and (NH4)₂SO₄ coatings on the ice nucleating properties of kaolinite were also investigated. Onset data was collected for H₂SO₄ coated and (NH4)₂SO₄ coated kaolinite particles at temperatures ranging from 233 to 247 K. In contrast to uncoated kaolinite particles, which were effective ice nuclei, H₂SO₄ coated particles were found to be poor ice nuclei, requiring relative humidities close to water saturation before nucleating ice at all temperatures studied. (NH4)₂SO₄ coated particles were poor ice nuclei at 245 K, but effective ice nuclei at 236 K.
Construction and Observation of Flexibly Controllable High-Dimensional Non-Hermitian Skin Effects
Creators: name: Zhang, Qicheng
name: Leng, Yufei
name: Xiong, Liwei
name: Li, Yuzeng
name: Zhang, Kun
name: Qi, Liangjun
name: Qiu, Chunyin
Publisher: name: arXiv
Year: 2024
Subjects: subject: Classical Physics (physics.class-ph)
subject: Materials Science (cond-mat.mtrl-sci)
subject: Other Condensed Matter (cond-mat.other)
subject: Applied Physics (physics.app-ph)
subject: FOS: Physical sciences

description: Non-Hermitian skin effect (NHSE) is one of the most fundamental phenomena in non-Hermitian physics. Although it is established that one-dimensional NHSE originates from the nontrivial spectral winding topology, the topological origin behind the higher-dimensional NHSE remains unclear so far. This poses a substantial challenge in constructing and manipulating high-dimensional NHSEs. Here, an intuitive bottom-to-top scheme to construct high-dimensional NHSEs is proposed, through assembling multiple independent one-dimensional NHSEs. Not only the elusive high-dimensional NHSEs can be effectively predicted from the well-defined one-dimensional spectral winding topologies, but also the high-dimensional generalized Brillouin zones can be directly synthesized from the one-dimensional counterparts. As examples, two two-dimensional nonreciprocal acoustic metamaterials are experimentally implemented to demonstrate highly controllable multi-polar NHSEs and hybrid skin-topological effects, where the sound fields can be frequency-selectively localized at any desired corners and boundaries. These results offer a practicable strategy for engineering high-dimensional NHSEs, which could boost advanced applications such as selective filters and directional amplifiers.
description: Published in Advanced Materials
Additional file 3: of Improved Natural Killer cell activity and retained anti-tumor CD8+ T cell responses contribute to the induction of a pathological complete response in HER2-positive breast cancer patients undergoing neoadjuvant chemotherapy
Creators: name: E Muraro
name: E Comaro
name: R Talamini
name: E Turchet
name: G Miolo
name: S Scalone
name: L Militello
name: D Lombardi
name: S Spazzapan
name: T Perin
name: S Massarut
name: D Crivellari
name: Dolcetti, Riccardo
name: D Martorelli
Publisher: name: Figshare
Year: 2015
Subjects: subject: Cell Biology
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer
subject: Hematology

description: Memory phenotyping of CD4+ and CD8+ T cells during NC in HER2-negative and HER2-positive patients. Comparison of the percentages of memory cell subsets within CD4+ and CD8+ T cells in HER2-negative (n=25) and HER2-positive (n=16) patients at diagnosis and during NC. W, week; *p<0.05 comparing values obtained in HER2-positive with those observed in HER2-negative patients. **p<0.05 in respect to the corresponding diagnosis levels.
Additional file 1 of TEX19 increases the levels of CDK4 and promotes breast cancer by disrupting SKP2-mediated CDK4 ubiquitination
Creators: name: Liu, Huantao
name: Wang, He
name: Zhang, Hongyu
name: Yu, Miaomiao
name: Tang, Yu
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Plant Biology

description: Supplementary Material 1
Additional file 1: of Improved Natural Killer cell activity and retained anti-tumor CD8+ T cell responses contribute to the induction of a pathological complete response in HER2-positive breast cancer patients undergoing neoadjuvant chemotherapy
Creators: name: E Muraro
name: E Comaro
name: R Talamini
name: E Turchet
name: G Miolo
name: S Scalone
name: L Militello
name: D Lombardi
name: S Spazzapan
name: T Perin
name: S Massarut
name: D Crivellari
name: Dolcetti, Riccardo
name: D Martorelli
Publisher: name: Figshare
Year: 2015
Subjects: subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Hematology
subject: Computational Biology

description: Flow cytometry gating strategy. Representative flow cytometry plots showing the gating strategy used to identify immune cell subsets. SS, Side Scatter; FS, Forward Scatter; CM, Central memory; EM, effector memory, Temra, terminally differentiated; NK, natural killer; Treg, regulatory T cells; Th17, T helper 17 cells.
Additional file 4: of The effect of skin-to-skin contact at birth, early versus immediate, on the duration of exclusive human lactancy in full-term newborns treated at the Clínica Universidad de La Sabana: study protocol for a randomized clinical trial
Creators: name: Agudelo, Sergio
name: Gamboa, Oscar
name: Rodríguez, Fabio
name: Cala, Sandra
name: Gualdrón, Nathalie
name: Obando, Evelyn
name: Padrón, María
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: Consent for publication. (DOC 24 kb)
Additional file 2: of Improved Natural Killer cell activity and retained anti-tumor CD8+ T cell responses contribute to the induction of a pathological complete response in HER2-positive breast cancer patients undergoing neoadjuvant chemotherapy
Creators: name: E Muraro
name: E Comaro
name: R Talamini
name: E Turchet
name: G Miolo
name: S Scalone
name: L Militello
name: D Lombardi
name: S Spazzapan
name: T Perin
name: S Massarut
name: D Crivellari
name: Dolcetti, Riccardo
name: D Martorelli
Publisher: name: Figshare
Year: 2015
Subjects: subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Exemplary ELISPOT pictures derived from survivin-, Flu/CEF-, or un-stimulated T cells. Representative wells obtained by IFN-Îł ELISPOT assay (panel A) or by IFN-Îł/IL-2 dual color ELISPOT assay (panel B) in HER2-positive breast cancer patients. A. Triplicates of wells obtained after stimulation of CD8+ T cells thorugh monocytes loaded with ELT95-103 survivin-derived peptide (upper line), GIL58-66 influenza-derived peptide (middle line), no peptides (lower line), at diagnosis (left triplicates) and after 24 weeks (right triplicates) of neoadjuvant chemotherapy in a patient undergoing a pathological complete response (left panel) and in a case of pathological partial response (right panel). B. Triplicates of wells achieved after stimulation of PBMCs with ELT95-103 survivin-derived peptide (upper line), a mix of CMV-EBV-Flu-derived peptides (middle line), no peptide, at diagnosis and after 24 weeks of neoadjuvant chemotherapy in a case of pathological complete response (left panel) and in a patient undergoing a pathological partial response. Sur, survivin; mono, monocytes; W, week.
Additional file 2: of The effect of skin-to-skin contact at birth, early versus immediate, on the duration of exclusive human lactancy in full-term newborns treated at the Clínica Universidad de La Sabana: study protocol for a randomized clinical trial
Creators: name: Agudelo, Sergio
name: Gamboa, Oscar
name: Rodríguez, Fabio
name: Cala, Sandra
name: Gualdrón, Nathalie
name: Obando, Evelyn
name: Padrón, María
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: List of data collection in the valuation call. (DOCX 13 kb)
Additional file 4: of Transgelin gene is frequently downregulated by promoter DNA hypermethylation in breast cancer
Creators: name: Nilufer Sayar
name: Karahan, Gurbet
name: Ozlen Konu
name: Betul Bozkurt
name: Onder Bozdogan
name: Isik Yulug
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Cancer
subject: Plant Biology
subject: Computational Biology

description: Tables not included in the main manuscript have been listed. Table S1. Number of probe sets affected by AZA treatment; Table S2. Comparison of significantly altered probe sets with the independent study GSE20713 Dataset; Table S3. Cancer vs. normal analysis of TAGLN mRNA in Oncomine database. (PDF 18Â kb)
Additional file 5: Figure S1. of Transgelin gene is frequently downregulated by promoter DNA hypermethylation in breast cancer
Creators: name: Nilufer Sayar
name: Karahan, Gurbet
name: Ozlen Konu
name: Betul Bozkurt
name: Onder Bozdogan
name: Isik Yulug
Publisher: name: Figshare
Year: 2015
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Plant Biology

description: TAGLN expression and methylation status, and lymph node metastasis of breast cancer; Figure S2. Univariate survival analysis of TAGLN microarray expression levels; Figure S3. Effect of TAGLN over-expression on migration and invasion of MDA-MB-157 cells. (PDF 1151Â kb)
Additional file 4: of Improved Natural Killer cell activity and retained anti-tumor CD8+ T cell responses contribute to the induction of a pathological complete response in HER2-positive breast cancer patients undergoing neoadjuvant chemotherapy
Creators: name: E Muraro
name: E Comaro
name: R Talamini
name: E Turchet
name: G Miolo
name: S Scalone
name: L Militello
name: D Lombardi
name: S Spazzapan
name: T Perin
name: S Massarut
name: D Crivellari
name: Dolcetti, Riccardo
name: D Martorelli
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Plant Biology
subject: FOS: Biological sciences

description: Immunohistochemistry analysis of lymphocyte infiltration in the tumor microenvironment. Two selected HER2-positive cases achieving pCR and pathological partial response, respectively, were analyzed by immunohistochemistry to characterize the presence of CD8+ cells within tumor microenvironment. Specimens were routinely fixed in 10% buffered formalin, embedded in paraffin and then stained with H&E for histological examination (upper panels). For immunohistochemical analyses (lower panels), 2 to 3 Îźm serial sections of primary tumors were processed with automated immunostainer Benchmark XT (Ventana, Tucson, AZ, USA), and staining was carried out with CD8 (clone SP57, Ventana Medical System, Tucson, AZ, USA) diluted 1:100. Nuclear counterstaining was accomplished with Harrisâ   hematoxylin. Omission of the primary antibody was used as a negative control. Representative microscopic fields were showed at 10x original magnification.
Additional file 1: of The effect of skin-to-skin contact at birth, early versus immediate, on the duration of exclusive human lactancy in full-term newborns treated at the Clínica Universidad de La Sabana: study protocol for a randomized clinical trial
Creators: name: Agudelo, Sergio
name: Gamboa, Oscar
name: Rodríguez, Fabio
name: Cala, Sandra
name: Gualdrón, Nathalie
name: Obando, Evelyn
name: Padrón, María
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Cancer

description: Format for data collection in the first face-to-face assessment. (DOCX 12 kb)