cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 2 of MicroRNA gga-miR-200a-3p modulates immune response via MAPK signaling pathway in chicken afflicted with necrotic enteritis
Creators: name: Pham, Thu
name: Jihye Ban
name: Yeojin Hong
name: Jiae Lee
name: Vu, Thi
name: Truong, Anh
name: Lillehoj, Hyun
name: Hong, Yeong
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 2: List of putative target genes of gga-200a-3p predicted by miRDB. Genes involved in immune-related pathway were identified using DAVID functional annotation tool, and KEGG pathway.
Knowledge and Use of Indigenous Numeral Systems among Southern Cushitic Speakers
Creators: name: Alphonce, Chrispina
Publisher: name: Zenodo
Year: 2019
Subjects: Languages of Tanzania
Tanzanian Rift Valley Area
Southern Cushitic languages
Bantu languages
Iraqw
Gorwaa
Alagwa
Burunge
Swahili
Numerals

description: Numeral systems of minority languages are liable to different kinds of sociolinguistic changes triggered by language contact. In turn, contact results to bilingualism/multilingualism in convergence area, and it is natural for the numeral system of the dominant language(s) to replace the indigenous numeral systems of minority languages. The Kiswahili numeral system is unceasingly supplanting indigenous numeral systems of many ECLs in Tanzania. In examining the numerals, the study investigated four Tanzanian Southern Cushitic languages: Iraqw, Gorwaa, Alagwa and Burunge. More specifically, the article surveyed indigenous numeral terms, speakers’ knowledge and usage of numeral terms, the reason(s) for survival of some numeral terms and the loss of the indigenous knowledge contained in Southern Cushitic numeral systems. The findings have revealed that speakers’ knowledge and use of indigenous numeral systems varies from one languages to another among Southern Cushitic speakers. Kiswahili numerals are significantly replacing indigenous numerals to the extent that indigenous numerals were even more threated to endangerment than the other systems of language. Dominance of Kiswahili, early schooling age, loss of older members of the communities are among reasons that triggered the loss of knowledge and restricting the usage of the indigenous numerals in these languages.
description: Note: This talk has not gone through a process of peer review, and findings should therefore be treated as preliminary and subject to change. Acknowledgement and citation: Alphonce, Chrispina. 2019. Knowledge and use of indigenous numeral systems among Southern Cushitic speakers. Talk given at Workshop on Bantu in contact with non-Bantu, ILCAA, TUFS. 28/07/2019.
MOESM14 of Comprehensive profiling of alternative splicing landscape during cold acclimation in tea plant
Creators: name: Li, Yeyun
name: Mi, Xiaozeng
name: Zhao, Shiqi
name: Zhu, Junyan
name: Guo, Rui
name: Xia, Xiaobo
name: Liu, Lu
name: Liu, Shengrui
name: Wei, Chaoling
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 14: Figure S6. Expression analysis of qRT-PCR and sequencing results.
Additional file 3 of Dysregulation of TNF-α and IFN-γ expression is a common host immune response in a chronically infected mouse model of melioidosis when comparing multiple human strains of Burkholderia pseudomallei
Creators: name: Amemiya, Kei
name: Dankmeyer, Jennifer
name: Bearss, Jeremy
name: Xiankun Zeng
name: Stonier, Spencer
name: Soffler, Carl
name: Cote, Christopher
name: Welkos, Susan
name: Fetterer, David
name: Chance, Taylor
name: Trevino, Sylvia
name: Worsham, Patricia
name: Waag, David
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 3 Figure S2. Intracellular expression of TNF-α and IFN-γ in infected spleen cells from B. pseudomallei exposed mice. The data are representative of 49 spleens from B. pseudomallei (includes 8 different strains) exposed mice and 10 naïve mice that were determined at least once. The aerosol 21 day LD50 studies of some B. pseudomallei strains were evaluated more than once. Examples of the intracellular expression of TNF-α in different cell types is shown in Figure S2A. Cytometric analysis of spleens from a naïve mouse (panel 1), two infected spleens from mice exposed to 7007 CFU of B. pseudomallei 1106a 50 days PI (panel 2), two spleens from mice exposed to ~ 1 CFU of B. pseudomallei MSHR5855 26 days PI, one normal appearing and one infected spleen (panel 3), and two spleens from mice exposed to 2 CFU of B. pseudomallei 1026b 30 days PI, one swollen and one infected (panel 4). The intracellular expression of IFN-γ in the same spleen cells is shown in Figure S2B. The intracellular expression of TNF-α and IFN-γ was examined in CD4+/CD44+ and CD8+/CD44+ T Cells, B cells (B220+/CD86+), monocyte/macrophages (CD11b+/CD44+), NK cells (CD49b+/CD44+), and granulocytes (Ly6G+/CD44+). The gating for the percentage of cells with intracellular cytokine expression was established with isotype or single stained controls or against naïve mice. Note the greater changes in the % monocyte/macrophages, % NK cells, and % granulocytes population in the cells from infected spleens.
GAIA: AGB stars as tracers of star formation histories in the Galaxy and beyond
Creators: name: Kucinskas, A.
name: Lindegren, L.
name: Tanabe, T.
name: Vansevicius, V.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We discuss the tracing of star formation histories with ESA's space astrometry mission GAIA, emphasizing the advantages of AGB stars for this purpose. GAIA's microarcsecond-level astrometry, multi-band photometry and spectroscopy will provide individual distances, motions, effective temperatures, gravities and metallicities for vast numbers of AGB stars in the Galaxy and beyond. Reliable ages of AGB stars can be determined to distances of \~200 kpc in a wide range of ages and metallicities, allowing star formation histories to be studied in a diversity of astrophysical environments.
description: 4 pages, 1 figure, to be appear in 'Mass-Losing Pulsating Stars and their Circumstellar Matter', eds. Y. Nakada, M. Honma & M. Seki, Kluwer ASSL series, vol. 283
Pteraster personatus Sladen 1891
Creators: name: Jangoux, Michel
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Echinodermata
Asteroidea
Velatida
Pterasteridae
Pteraster
Pteraster personatus

description: sordidus Perrier, 1894, Pteraster
Pteraster sordidus Perrier, 1894: 182, pl. 12, fig. 2a-c.
Pteraster personatus ‒ Clark & Downey 1992: 334.
CURRENT STATUS. — Pteraster personatus Sladen, 1891.
TYPE MATERIAL. — Morocco • 1 syntype; station 81; off Moroccan coast; Talisman expedition; 1883; 23°50’N, 19°37’W; 1139 m; MNHN-IE-2014-362 • 1 syntype; same as for preceding; MNHN- IE-2014-141.
description: Published as part of Jangoux, Michel, 2022, The type specimens of extant asteroids (Echinodermata) in the Muséum national d'Histoire naturelle of Paris, pp. 259-334 in Zoosystema 44 (11) on page 318, DOI: 10.5252/zoosystema2022v44a11, http://zenodo.org/record/6616817
The NuTeV Anomaly, Lepton Universality, and Non-Universal Neutrino-Gauge Couplings
Creators: name: Loinaz, Will
name: Okamura, Naotoshi
name: Rayyan, Saifuddin
name: Takeuchi, Tatsu
name: Wijewardhana, L. C. R.
Publisher: name: arXiv
Year: 2004
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: In previous studies we found that models with flavor-universal suppression of the neutrino-gauge couplings are compatible with NuTeV and Z-pole data. In this paper we expand our analysis to obtain constraints on flavor-dependent coupling suppression by including lepton universality data from W, tau, pi and K decays in fits to model parameters. We find that the data are consistent with a variety of patterns of coupling suppression. In particular, in scenarios in which the suppression arises from the mixing of light neutrinos with heavy gauge singlet states (neutrissimos), we find patterns of flavor-dependent coupling suppression which are also consistent with constraints from mu -> e gamma.
description: REVTeX4, 25 pages, 10 postscript figures. Updated fits using the new top mass. Updated figures. Extended discussion on the status of the determination of B(tau->pi nu)
EOS-DATA-2019-01: Posterior samples for Bbar -> D(*)lnu form factors in the heavy-quark expansion to order 1/m_c^2
Creators: name: Bordone, Marzia
name: Jung, Martin
name: van Dyk, Danny
Publisher: name: Zenodo
Year: 2019

description: Ancillary files for arXiv:1908.09398 For the fit model 3/2/1 we provide 50k posterior samples obtained from fits to a
 theory-only likelihood (th-only) and a likelihood with theoretical and all experimental
 constraints (th+all-exp): anc/pmc_321_th-only_50k.hdf5
 anc/pmc_321_th+all-exp_50k.hdf5 The posterior samples can be accessed through the following few lines of Python code: import h5py
 f = h5py.File('anc/pmc_321_th-only_50k.hdf5', 'r')
 samples = f['/data/final/samples'][:] The first 23 (i=0..22) columnns of 'samples' correspond to the HQE parameters in the following order: xi'(1), xi''(1), xi'''(1),
 chi_2(1), chi_2'(1), chi_2''(1)
 chi_3'(1), chi_3''(1),
 eta(1), eta'(1), eta''(1)
 l_1(1), l_1'(1),
 l_2(1), l_2'(1),
 l_3(1), l_3'(1),
 l_4(1), l_4'(1),
 l_5(1), l_5'(1),
 l_6(1), l_6'(1) The 24th (i=23) column corresponds to the index of the generating component in the Population Monte
 Carlo algorithm. The 25th (i=24) column corresponds to the log(posterior) value, and the 26th (i=25)
 column corresponds to the log(weight) of the sample.
Additional file 3 of Iron in airway macrophages and infective exacerbations of chronic obstructive pulmonary disease
Creators: name: Ho, Terence
name: Nichols, Matthew
name: Nair, Gayatri
name: Radford, Katherine
name: Kjarsgaard, Melanie
name: Huang, Chynna
name: Bhalla, Anurag
name: Lavigne, Nicola
name: Mukherjee, Manali
name: Surette, Michael
name: Macri, Joseph
name: Nair, Parameswaran
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 3: Figure S1a. Linear regression of sputum supernatant interleukin-6 (by ELISA) and sputum hemosiderin index.
title: Inventaire des titres de propriété et des actes concernant les droits de l'abbaye de Morimond, Manuscrit n° 1, Bibliothèque municipale de Bourbonne-les-Bains, f.134b
Creators: name: Rouzeau, Benoît
name: Rouzeau, Benoît
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2021
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: cistercien
subject: cartulaire

description: Inventaire des titres de propriété et des actes concernant les droits de l'abbaye de Morimond, Manuscrit n° 1, Bibliothèque municipale de Bourbonne-les-Bains. Numérisation en mode image
description: Relation: https://cisterciensetressources.lamop.fr/
description: Bibliographic citation: Inventaire des titres de propriété et des actes concernant les droits de l'abbaye de Morimond, Manuscrit n° 1, Bibliothèque municipale de Bourbonne-les-Bains, f.134b, in Projet Cisterciens et Ressources [Ressource en ligne], https://cisterciensetressources.lamop.fr
description: Inventaire des titres de propriété et des actes concernant les droits de l'abbaye de Morimond, Manuscrit n° 1, Bibliothèque municipale de Bourbonne-les-Bains, f. 134b
Decoding Neural Responses in Mouse Visual Cortex through a Deep Neural Network
Creators: name: Iqbal, Asim
name: Dong, Phil
name: Kim, Christopher M
name: Jang, Heeun
Publisher: name: arXiv
Year: 2019
Subjects: subject: Neurons and Cognition (q-bio.NC)
subject: Artificial Intelligence (cs.AI)
subject: Machine Learning (cs.LG)
subject: Neural and Evolutionary Computing (cs.NE)
subject: FOS: Biological sciences
subject: FOS: Computer and information sciences
subject: I.2.0; I.2.6; H.1.0

description: Finding a code to unravel the population of neural responses that leads to a distinct animal behavior has been a long-standing question in the field of neuroscience. With the recent advances in machine learning, it is shown that the hierarchically Deep Neural Networks (DNNs) perform optimally in decoding unique features out of complex datasets. In this study, we utilize the power of a DNN to explore the computational principles in the mammalian brain by exploiting the Neuropixel data from Allen Brain Institute. We decode the neural responses from mouse visual cortex to predict the presented stimuli to the animal for natural (bear, trees, cheetah, etc.) and artificial (drifted gratings, orientated bars, etc.) classes. Our results indicate that neurons in mouse visual cortex encode the features of natural and artificial objects in a distinct manner, and such neural code is consistent across animals. We investigate this by applying transfer learning to train a DNN on the neural responses of a single animal and test its generalized performance across multiple animals. Within a single animal, DNN is able to decode the neural responses with as much as 100% classification accuracy. Across animals, this accuracy is reduced to 91%. This study demonstrates the potential of utilizing the DNN models as a computational framework to understand the neural coding principles in the mammalian brain.
On the Blackman's Association Problem
Creators: name: Dezert, Jean
name: Smarandache, Florentin
name: Tchamova, Albena
Publisher: name: arXiv
Year: 2003
Subjects: subject: General Mathematics (math.GM)
subject: FOS: Mathematics
subject: 94A15, 94A17

description: Modern multitarget-multisensor tracking systems involve the development of reliable methods for the data association and the fusion of multiple sensor information, and more specifically the partioning of observations into tracks. This paper discusses and compares the application of Dempster-Shafer Theory (DST) and the Dezert-Smarandache Theory (DSmT) methods to the fusion of multiple sensor attributes for target identification purpose. We focus our attention on the paradoxical Blackman's association problem and propose several approaches to outperfom Blackman's solution. We clarify some preconceived ideas about the use of degree of conflict between sources as potential criterion for partitioning evidences.
description: 16 pages. Presented to the Sixth International Conference on Information Fusion, Cairns, Queensland, Australia, 8-11 July 2003
Cangrejos Braquiuros del Golfo de México
Creators: name: Ugalde, Diana
name: Simões, Nuno
Publisher: name: Zenodo
Year: 2021
Subjects: Brachyura
Brachyuran Crabs
Taxonomy
Gulf of Mexico
Biodiversity Marine
Biodiversity
Marine Biology

description: This Infographic is a product of BDMY project (https://www.bdmy.org.mx), that was produced with funds of the Harte Research Institute for Gulf of Mexico Studies.
 The information in the infographic was reviewed and validated by a group of specialists in the taxon. CC-BY-NC-ND
Exact solutions of generalized non-linear time-fractional reaction-diffusion equations with time delay
Creators: name: Prakash, P.
name: Choudhary, Sangita
name: Daftardar-Gejji, Varsha
Publisher: name: arXiv
Year: 2020
Subjects: subject: Analysis of PDEs (math.AP)
subject: Mathematical Physics (math-ph)
subject: FOS: Mathematics
subject: FOS: Physical sciences

description: In this paper, we propose the invariant subspace approach to find exact solutions of time-fractional partial differential equations (PDEs) with time delay. An algorithmic approach of finding invariant subspaces for the generalized non-linear time-fractional reaction-diffusion equations with time delay is presented. We show that the fractional reaction-diffusion equations with time delay admit several invariant subspaces which further yields several distinct analytical solutions. We also demonstrate how to derive exact solutions for time-fractional PDEs with multiple time delays. Finally, we extend the invariant subspace method to more generalized time-fractional PDEs with non-linear terms involving time delay.
description: 30 pages
Additional file 1 of MicroRNA gga-miR-200a-3p modulates immune response via MAPK signaling pathway in chicken afflicted with necrotic enteritis
Creators: name: Pham, Thu
name: Jihye Ban
name: Yeojin Hong
name: Jiae Lee
name: Vu, Thi
name: Truong, Anh
name: Lillehoj, Hyun
name: Hong, Yeong
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Primer sequences used for quantitative real-time PCR and cloning.
Iconaster longimanus
Creators: name: Jangoux, Michel
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Echinodermata
Asteroidea
Valvatida
Goniasteridae
Iconaster
Iconaster longimanus

description: * souleyettii Dujardin & Hupé, 1862, Astrogonium
Astrogonium souleyetti Dujardin & Hupé, 1862: 397, pl. 7, fig. 7.
Iconaster longimanus ‒ Clark 1993: 245.
CURRENT STATUS. — Iconaster longimanus (Möbius, 1859).
REMARK
Holotype from Malacca Strait (Bonite expedition [1836-1837], Eydoux & Souleyet leg.).
description: Published as part of Jangoux, Michel, 2022, The type specimens of extant asteroids (Echinodermata) in the Muséum national d'Histoire naturelle of Paris, pp. 259-334 in Zoosystema 44 (11) on page 318, DOI: 10.5252/zoosystema2022v44a11, http://zenodo.org/record/6616817
Additional file 4 of Iron in airway macrophages and infective exacerbations of chronic obstructive pulmonary disease
Creators: name: Ho, Terence
name: Nichols, Matthew
name: Nair, Gayatri
name: Radford, Katherine
name: Kjarsgaard, Melanie
name: Huang, Chynna
name: Bhalla, Anurag
name: Lavigne, Nicola
name: Mukherjee, Manali
name: Surette, Michael
name: Macri, Joseph
name: Nair, Parameswaran
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 4: Figure S1b. Linear regression of serum interleukin-6 (by ELISA) and sputum hemosiderin index.
MOESM1 of Genome-wide association mapping revealed syntenic loci QFhb-4AL and QFhb-5DL for Fusarium head blight resistance in common wheat (Triticum aestivum L.)
Creators: name: Hu, Wenjing
name: Gao, Derong
name: Wu, Hongya
name: Liu, Jian
name: Zhang, Chunmei
name: Wang, Junchan
name: Jiang, Zhengning
name: Liu, Yeyu
name: Li, Dongsheng
name: Zhang, Yong
name: Lu, Chengbin
Publisher: name: figshare
Year: 2020
Subjects: subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Hematology
subject: Plant Biology
subject: Virology

description: Additional file 1: Table S1 171 wheat accessions used in the genome-wide association study (GWAS) for FHB severities and their origins, Table S2 Marker-trait associations (MTAs) for FHB resistance in 171 wheat accessions identified by the Tassel v5.0, Table S3 Cultivars belonging to different haplotype and their FHB severities, Table S4 Physical positions of reported FHB resistance QTL related to the current study, Table S5 The associated regions with FHB resistance with the same function exists in the corresponding sections of 4A and 5D.
Use of a Generalized Energy Mover's Distance in the Search for Rare Phenomena at Colliders
Creators: name: Romao, M. Crispim
name: Castro, N. F.
name: Milhano, J. G.
name: Pedro, R.
name: Vale, T.
Publisher: name: arXiv
Year: 2020
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences

description: In this paper, we expand on the previously proposed concept of Energy Mover's Distance. The resulting observables are shown to provide a way of identifying rare processes in proton-proton collider experiments. It is shown that different processes are grouped together differently and that this can contribute to the improvement of experimental analyses. The $t\bar{t}Z$ production at the Large Hadron Collider is used as a benchmark to illustrate the applicability of the method. Furthermore, we study the use of these observables as new features which can be used in the training of Deep Neural Networks.
description: 11 pages, 8 figures. Published in EPJC
Additional file 4 of Practical methods for incorporating summary time-to-event data into meta-analysis: updated guidance
Creators: name: Tierney, Jayne F.
name: Burdett, Sarah
name: Fisher, David J.
Publisher: name: figshare
Year: 2025
Subjects: Molecular Biology
Biological Sciences not elsewhere classified
Information Systems not elsewhere classified
Cancer
Science Policy

description: Additional file 4. Spreadsheet guide.
Moluscos del Golfo de México
Creators: name: Ugalde, Diana
name: Simões, Nuno
Publisher: name: Zenodo
Year: 2021
Subjects: Mollusca
Mollusk
Taxonomy
Gulf of Mexico
Biodiversity Marine
Marine Biology
Biodiversity

description: This Infographic is a product of BDMY project (https://www.bdmy.org.mx), that was produced with funds of the Harte Research Institute for Gulf of Mexico Studies.
 The information in the infographic was reviewed and validated by a group of specialists in the taxon. CC-BY-NC-ND
Spin dependent observable effect for free particles using the arrival time distribution
Creators: name: Ali, Md. Manirul
name: Majumdar, A. S.
name: Home, D.
name: Sengupta, S.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The mean arrival time of free particles is computed using the quantum probability current. This is uniquely determined in the non-relativistic limit of Dirac equation, although the Schroedinger probability current has an inherent non-uniqueness. Since the Dirac probability current involves a spin-dependent term, an arrival time distribution based on the probability current shows an observable spin-dependent effect, even for free particles. This arises essentially from relativistic quantum dynamics, but persists even in the non-relativistic regime.
description: 5 Latex pages, 2.eps figures; discussions sharpened and references added; accepted for publication in Physical Review A
An energetic stellar outburst accompanied by circumstellar light echoes
Creators: name: Bond, Howard E.
name: Henden, Arne
name: Levay, Zoltan G.
name: Panagia, Nino
name: Sparks, William B.
name: Starrfield, Sumner
name: Wagner, R. Mark
name: Corradi, R. L. M.
name: Munari, U.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Some classes of stars, including supernovae and novae, undergo explosive outbursts that eject stellar material into space. In 2002, the previously unknown variable star V838 Monocerotis brightened suddenly by a factor of about 10^4. Unlike a supernova or nova, V838 Mon did not explosively eject its outer layers; rather, it simply expanded to become a cool supergiant with a moderate-velocity stellar wind. Superluminal light echoes were discovered as light from the outburst propagated into surrounding, pre-existing circumstellar dust. Here we report high-resolution imaging and polarimetry of the light echoes, which allow us to set direct geometric distance limits to the object. At a distance of >6 kpc, V838 Mon at its maximum brightness was temporarily the brightest star in the Milky Way. The presence of the circumstellar dust implies that previous eruptions have occurred, and spectra show it to be a binary system. When combined with the high luminosity and unusual outburst behavior, these characteristics indicate that V838 Mon represents a hitherto unknown type of stellar outburst, for which we have no completely satisfactory physical explanation.
description: To appear in Nature, March 27, 2003. 9 pages, 6 figures
The Chemical Properties of Milky Way and M31 Globular Clusters: I. A Comparative Study
Creators: name: Beasley, Michael A.
name: Brodie, Jean P.
name: Strader, Jay
name: Forbes, Duncan A.
name: Proctor, Robert N.
name: Barmby, Pauline
name: Huchra, John P.
Publisher: name: arXiv
Year: 2004
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: A comparative analysis is performed between high-quality integrated spectra of 30 globular clusters in M31, 20 Milky Way clusters, and a sample of field and cluster elliptical galaxies. We find that the Lick CN indices in the M31 and Galactic clusters are enhanced relative to the bulges of the Milky Way, M31, and elliptical spheroids. Although not seen in the Lick CN indices, the near-UV cyanogen feature (3883 A) is strongly enhanced in M31 clustesr with respect to the Galactic globulars at metallicities, --1.5--0.8, we observe no siginificant differences in the Hdelta, Hgamma, or Hbeta indices between the M31 and Galactic globulars. The sample of ellipticals lies offset from the loci of all the globulars in the Cyanogen--[MgFe], and Balmer--[MgFe] planes. Six of the M31 cluster spectra appear young, and are projected onto the M31 disk. Population synthesis models suggest that these are metal-rich clusters with ages 100--800 Myr, metallicities --0.20 < [Fe/H] <0.35, and masses 0.7 -7.0x10^4 Msun. Two other young clusters are Hubble V in NGC 205, and an older (~3 Gyr) cluster ~7 kpc away from the plane of the disk. The six clusters projected onto the disk rotate in a similar fashion to the HI gas in M31, and three clusters exhibit thin disk kinematics (Morrison et al.). Dynamical masses and structural parameters are required for these objects to determine whether they are massive open clusters or globular clusters. If the latter, our findings suggest globular clusters may trace the build up of galaxy disks. In either case, we conclude that these clusters are part of a young, metal-rich disk cluster system in M31, possibly as young as 1 Gyr old.
description: 52 pages, 14 figures, 8 tables, minor revisions in response to referee, conclusions remain the same. Scheduled to appear in the October 2004 issue of The Astronomical Journal
Additional file 1 of Examining purchasing reforms towards universal health coverage by the National Hospital Insurance Fund in Kenya
Creators: name: Rahab Mbau
name: Kabia, Evelyn
name: Honda, Ayako
name: Hanson, Kara
name: Barasa, Edwine
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: Marine Biology
subject: Cancer

description: Additional file 1: Appendix 1. Semi- structured topic Guide for in-depth interviews.
Capturing Complex Behaviour in Josephson Travelling Wave Parametric Amplifiers
Creators: name: Dixon, Tom
name: Dunstan, Jacob W.
name: Long, George B.
name: Williams, Jonathan M.
name: Meeson, Phil J.
name: Shelly, Connor D.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We present an analysis of wave-mixing in recently developed Josephson Travelling Wave Parametric Amplifiers (JTWPAs). Circuit simulations performed using WRspice show the full behaviour of the JTWPA allowing propagation of all tones. The Coupled Mode Equations (CMEs) containing only pump, signal, and idler propagation are shown to be insufficient to completely capture complex mixing behaviour in the JTWPA. Extension of the CMEs through additional state vectors in the analytic solutions allows closer agreement with WRspice. We consider an ordered framework for the systematic inclusion of extended eigenmodes and make a qualitative comparison with WRspice at each step. The agreement between the two methods validates both approaches and provides insight into the operation of the JTWPA. We show that care should be taken when using the CMEs and propose that WRspice should be used as a design tool for non-linear superconducting circuits such as the JTWPA.
description: 11 pages, 6 figures
Astropecten regalis Gray 1840
Creators: name: Jangoux, Michel
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Echinodermata
Asteroidea
Paxillosida
Astropectinidae
Astropecten
Astropecten regalis

description: spatuliger Perrier, 1875, Astropecten
Astropecten spatuliger Perrier, 1875: 376.
Astropecten regalis ‒ Clark 1989: 269.
CURRENT STATUS. — Astropecten regalis Gray, 1840.
TYPE MATERIAL. — Nicaragua • holotype; Michelin leg.; MNHN- IE-2014-10.
description: Published as part of Jangoux, Michel, 2022, The type specimens of extant asteroids (Echinodermata) in the Muséum national d'Histoire naturelle of Paris, pp. 259-334 in Zoosystema 44 (11) on page 318, DOI: 10.5252/zoosystema2022v44a11, http://zenodo.org/record/6616817
Specialization of the torsion subgroup of the Chow group
Creators: name: Schoen, Chad
Publisher: name: arXiv
Year: 2004
Subjects: subject: Algebraic Geometry (math.AG)
subject: FOS: Mathematics
subject: 14C25

description: An example is given in which specialization is not injective.
description: AMSTEX, 6 pages. This version is a minor modification of a manuscript from February 2004. Reference to a related recent e-print by C. Soul'e and C. Voisin is included
Aquilonastra coronata
Creators: name: Jangoux, Michel
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Echinodermata
Asteroidea
Valvatida
Asterinidae
Aquilonastra
Aquilonastra coronata

description: spinigera Koehler, 1911, Asterina
Asterina spinigera Koehler, 1911: 20.
Aquilonastra coronata ‒ O’Loughlin & Rowe 2006: 270.
CURRENT STATUS. — Aquilonastra coronata (Martens, 1866).
TYPE MATERIAL. — Singapore • holotype; MNHN-IE-2014-464.
description: Published as part of Jangoux, Michel, 2022, The type specimens of extant asteroids (Echinodermata) in the Muséum national d'Histoire naturelle of Paris, pp. 259-334 in Zoosystema 44 (11) on page 318, DOI: 10.5252/zoosystema2022v44a11, http://zenodo.org/record/6616817
Additional file 3 of Variations in association of nasal microbiota with virulent and non-virulent strains of Glaesserella (Haemophilus) parasuis in weaning piglets
Creators: name: Mahmmod, Yasser
name: Correa-Fiz, Florencia
name: Aragon, Virginia
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases
subject: 60506 Virology

description: Additional file 3. The results of univariable model analyses of virulent strain (A), non-virulent strain (B), and relative abundance of G. parasuis (C), expressed as natural logarithm at genus level taxa. A Univariable logistic regression for potential risk factors and nasal microbiota at genus level associated with the virulent strain of G. parasuis (virGp) infection (P-value ≤ 0.25) in 51 piglets in 7 Spanish farms. B Univariable logistic regression for potential risk factors and nasal microbiota at genus level associated with the non-virulent strain of G. parasuis (non-virGp) infection (P-value ≤ 0.25) in 51 piglets in 7 Spanish farms. C Univariable linear regression for potential risk factors and nasal microbiota at genus level associated with relative abundance of G. parasuis, expressed as natural logarithm, (P-value ≤ 0.25) in 51 piglets in 7 Spanish farms.
Quantum Dynamics of the Oscillating Cantilever-Driven Adiabatic Reversals in Magnetic Resonance Force Microscopy
Creators: name: Berman, G. P.
name: Borgonovi, F.
name: Tsifrinovich, V. I.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We simulated the quantum dynamics for magnetic resonance force microscopy (MRFM) in the oscillating cantilever-driven adiabatic reversals (OSCAR) technique. We estimated the frequency shift of the cantilever vibrations and demonstrated that this shift causes the formation of a Schrodinger cat state which has some similarities and differences from the conventional MRFM technique which uses cyclic adiabatic reversals of spins. The interaction of the cantilever with the environment is shown to quickly destroy the coherence between the two possible cantilever trajectories. We have shown that using partial adiabatic reversals, one can produce a significant increase in the OSCAR signal.
description: submitted to PRA
Searching for polarization in signed graphs: a local spectral approach
Creators: name: Xiao, Han
name: Ordozgoiti, Bruno
name: Gionis, Aristides
Publisher: name: arXiv
Year: 2020
Subjects: subject: Social and Information Networks (cs.SI)
subject: Computers and Society (cs.CY)
subject: Information Retrieval (cs.IR)
subject: FOS: Computer and information sciences

description: Signed graphs have been used to model interactions in social net-works, which can be either positive (friendly) or negative (antagonistic). The model has been used to study polarization and other related phenomena in social networks, which can be harmful to the process of democratic deliberation in our society. An interesting and challenging task in this application domain is to detect polarized communities in signed graphs. A number of different methods have been proposed for this task. However, existing approaches aim at finding globally optimal solutions. Instead, in this paper we are interested in finding polarized communities that are related to a small set of seed nodes provided as input. Seed nodes may consist of two sets, which constitute the two sides of a polarized structure. In this paper we formulate the problem of finding local polarized communities in signed graphs as a locally-biased eigen-problem. By viewing the eigenvector associated with the smallest eigenvalue of the Laplacian matrix as the solution of a constrained optimization problem, we are able to incorporate the local information as an additional constraint. In addition, we show that the locally-biased vector can be used to find communities with approximation guarantee with respect to a local analogue of the Cheeger constant on signed graphs. By exploiting the sparsity in the input graph, an indicator vector for the polarized communities can be found in time linear to the graph size. Our experiments on real-world networks validate the proposed algorithm and demonstrate its usefulness in finding local structures in this semi-supervised manner.
description: 11 pages, 6 figures, accepted by WWW 2020, April 20-24, 2020, Taipei, Taiwan
Additional file 5 of Iron in airway macrophages and infective exacerbations of chronic obstructive pulmonary disease
Creators: name: Ho, Terence
name: Nichols, Matthew
name: Nair, Gayatri
name: Radford, Katherine
name: Kjarsgaard, Melanie
name: Huang, Chynna
name: Bhalla, Anurag
name: Lavigne, Nicola
name: Mukherjee, Manali
name: Surette, Michael
name: Macri, Joseph
name: Nair, Parameswaran
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 5: Table S2: Characteristics of RT-qPCR cohorts.
Scattering of compactlike structures
Creators: name: Bazeia, D.
name: Mendonca, T. S.
name: Menezes, R.
name: de Oliveira, H. P.
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We investigate the collision of a new class of topological defects that tends to become compact as a control parameter increases to larger and larger values These new compactlike defects have, in general, more than one internal discrete mode depending on the value of the control parameter and, as usual, there is a critical velocity above which the defects escape after the collision. We noticed that below the critical velocity there are the windows of escape presenting fractal structure. An interesting novelty is the appearance of metastable structures with the formation of compactlike defects, maintaining a fixed distance from each other. Another new feature is the formation of boosted localized distributions of the scalar field which we called moving oscillons. These oscillons carry away almost all scalar field energy producing a complete disruption of the compactlike defects. The pattern of the moving oscillons depends on the control parameter, and becomes more complex as we increase its value. We conjecture that the new effects may be connected with the presence of more than one vibrational mode in the spectrum of the stability potential of the model under investigation.
description: 10 pages, 10 figures
Optical telecom networks as weak quantum measurements with post- selection
Creators: name: Brunner, Nicolas
name: Acin, Antonio
name: Collins, Daniel
name: Gisin, Nicolas
name: Scarani, Valerio
Publisher: name: arXiv
Year: 2003
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We show that weak measurements with post-selection, proposed in the context of the quantum theory of measurement, naturally appear in the everyday physics of fiber optics telecom networks through polarization-mode dispersion (PMD) and polarization-dependent losses (PDL). Specifically, the PMD leads to a time-resolved discrimination of polarization; the post-selection is done in the most natural way: one post-selects those photons that have not been lost because of the PDL. The quantum formalism is shown to simplify the calculation of optical networks in the telecom limit of weak PMD.
description: 4 pages, 1 figure
Additional file 6 of Iron in airway macrophages and infective exacerbations of chronic obstructive pulmonary disease
Creators: name: Ho, Terence
name: Nichols, Matthew
name: Nair, Gayatri
name: Radford, Katherine
name: Kjarsgaard, Melanie
name: Huang, Chynna
name: Bhalla, Anurag
name: Lavigne, Nicola
name: Mukherjee, Manali
name: Surette, Michael
name: Macri, Joseph
name: Nair, Parameswaran
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 6: Figure S2. Intracellular iron content of cell-line derived macrophages after 24-hour incubation with various conditions.
MOESM15 of Comprehensive profiling of alternative splicing landscape during cold acclimation in tea plant
Creators: name: Li, Yeyun
name: Mi, Xiaozeng
name: Zhao, Shiqi
name: Zhu, Junyan
name: Guo, Rui
name: Xia, Xiaobo
name: Liu, Lu
name: Liu, Shengrui
name: Wei, Chaoling
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Molecular Biology
subject: Ecology
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Developmental Biology

description: Additional file 15: Figure S7. Verification of alternatively spliced isoforms.
The First Two Host Galaxies of X-ray Flashes: XRF 011030 and XRF 020427
Creators: name: Bloom, J. S.
name: Fox, D.
name: van Dokkum, P. G.
name: Kulkarni, S. R.
name: Berger, E.
name: Djorgovski, S. G.
name: Frail, D. A.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Given the paucity of empirical constraints, the nature of the newly-recognized phenomena called X-Ray Flashes (XRFs) has been an open question. However, with the recent detections of radio and X-ray afterglow it is finally possible to study the large- and small-scale environments of XRFs. We present Chandra, Hubble Space Telescope (HST), and Keck observations of the fields of XRFs 011030 and 020427. Astrometric comparisons of the X-ray transient positions and the HST images reveal the XRFs to be associated with faint blue galaxies. Photometric evidence of these putative hosts suggests that these two XRFs originated from redshifts less than z ~ 3.5, and thus cannot be due to GRBs at very high redshifts. In both host-burst offsets and host properties, these XRFs could have been drawn from distributions similar to those measured of gamma-ray bursts (GRBs). We conclude with a discussion of the implications of this XRF-GRB host connection for the possible progenitors of XRFs.
description: 15 pages, 1 color figure. Revised following comments from the referee and references updated. High-resolution version at http://www-cfa.harvard.edu/~jbloom/xrfs.pdf
Flexible Production Systems: Automated Generation of Operations Plans Based on ISA-95 and PDDL
Creators: name: Wally, Bernhard
name: Vyskočil, Jirí
name: Novák, Petr
name: Huemer, Christian
name: Šindelář, Radek
name: Kadera, Petr
name: Mazak, Alexandra
name: Wimmer, Manuel
Publisher: name: arXiv
Year: 2019
Subjects: subject: Systems and Control (eess.SY)
subject: FOS: Electrical engineering, electronic engineering, information engineering

description: Model-driven engineering (MDE) provides tools and methods for the manipulation of formal models. In this letter, we leverage MDE for the transformation of production system models into flat files that are understood by general purpose planning tools and that enable the computation of plans, i.e., sequences of production steps that are required to reach certain production goals. These plans are then merged back into the production system model, thus enriching the formalized production system knowledge.
Additional file 7 of Iron in airway macrophages and infective exacerbations of chronic obstructive pulmonary disease
Creators: name: Ho, Terence
name: Nichols, Matthew
name: Nair, Gayatri
name: Radford, Katherine
name: Kjarsgaard, Melanie
name: Huang, Chynna
name: Bhalla, Anurag
name: Lavigne, Nicola
name: Mukherjee, Manali
name: Surette, Michael
name: Macri, Joseph
name: Nair, Parameswaran
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 7: Figure S3. Linear regression of sputum hemosiderin index and growth rate of H. influenzae.
Diplasterias brandti
Creators: name: Jangoux, Michel
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Echinodermata
Asteroidea
Forcipulatida
Asteriidae
Diplasterias
Diplasterias brandti

description: * spinosa Perrier, 1891, Diplasterias
Diplasterias spinosa Perrier, 1891: 82.
Diplasterias brandti ‒ Koehler 1908a: 573.
CURRENT STATUS. — Diplasterias brandti (Bell, 1881).
REMARK
Holotype of the species was formerly referenced under number ECAH-4398 (Cape Horn expedition [1882-1883]; 47°29’S, 66°45’W).
description: Published as part of Jangoux, Michel, 2022, The type specimens of extant asteroids (Echinodermata) in the Muséum national d'Histoire naturelle of Paris, pp. 259-334 in Zoosystema 44 (11) on page 318, DOI: 10.5252/zoosystema2022v44a11, http://zenodo.org/record/6616817
Starburst Galaxies: Why the Calzetti Dust Extinction Law?
Creators: name: Fischera, Joerg
name: Dopita, Michael A.
name: Sutherland, Ralph S.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: The empirical reddening function for starburst galaxies generated by Calzetti and her co-workers has proven very successful, and is now used widely in the observational literature. Despite its success, however, the physical basis for this extinction law, or more correctly, attenuation law remains weak. Here we provide a physical explanation for the Calzetti Law based on a turbulent interstellar medium. In essence, this provides a log-normal distribution of column densities, giving a wide range of column densities in the dusty foreground screen. Therefore, extended sources such as starburst regions or HII regions seen through it suffer a point-to-point stochastic extinction and reddening. Regions of high column densities are "black" in the UV, but translucent in the IR, which leads to a flatter extinction law, and a larger value of the total to selective extinction, R_V. We fit the Calzetti Law, and infer that the variance sigma of the log-normal distribution lies in the range 0.6
description: accepted for publication in ApJL
Additional file 1 of Image quality improvement in head and neck angiography based on dual-energy CT and deep learning
Creators: name: Zhang, He
name: Zhang, Lulu
name: Long, Juan
name: Sun, Xiaonan
name: Zhang, Shuai
name: Sun, Aiyun
name: Qiu, Shenman
name: Meng, Yankai
name: Ding, Tao
name: Hu, Chunfeng
name: Xu, Kai
Publisher: name: figshare
Year: 2025
Subjects: Biophysics
Space Science
Medicine
Cell Biology
Chemical Sciences not elsewhere classified

description: Supplementary Material 1