cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Some Further Properties of the Accelerated Kerr-Schild Metrics
Creators: name: Gurses, Metin
name: Sarioglu, Ozgur
Publisher: name: arXiv
Year: 2003
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We extend the previously found accelerated Kerr-Schild metrics for Einstein-Maxwell-null dust and Einstein-Born-Infeld-null dust equations to the cases including the cosmological constant. This way we obtain the generalization of the charged de Sitter metrics in static space-times. We also give a generalization of the zero acceleration limit of our previous Einstein-Maxwell and Einstein-Born-Infeld solutions.
description: REVTeX4, 7 pages, no figures
MOESM1 of Influence of mesenchymal stem cell-derived extracellular vesicles in vitro and their role in ageing
Creators: name: Fafián-Labora, Juan
name: Morente-López, Miriam
name: Sánchez-Dopico, María
name: Arntz, Onno
name: Loo, Fons Van De
name: Toro, Javier
name: Arufe, María
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Figure S1. Young MSCs-derived EVs labelled with DiI inside old MSCs is shown.
Deployment recommendation for Distributed Acoustic Sensing at the surface
Creators: name: Edme, Pascal
name: Paitz, Patrick
name: Nap, Ana
name: Martin, Francois
name: Metraux, Valentin
name: Guglielmetti, Luca
name: Schmelzbach, Cédric
name: Perron, Vincent
name: Bowden, Daniel
name: Dupuy, David
name: Moscariello, Andrea
name: Fichtner, Andreas
name: Robertsson, Johan O.A.
Publisher: name: ETH Zurich
Year: 2020

description: EGUsphere
Psilotreta frigidaria Mey 1996
Creators: name: Arefina-Armitage, I.
name: J, Brian
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Trichoptera
Odontoceridae
Psilotreta
Psilotreta frigidaria

description: Psilotreta frigidaria Mey
 Psilotreta frigidaria Mey 1997: 202.
 Material examined. Vietnam: Lao Cai Province, 1.5 m wide stream near mountain pass on road from Sapa to Lai Chau, Malaise trap, 8-12 May 1995, D. Currie, J. Swann, 3 males, ROM 956040, ROME.
 Distribution. Vietnam (Lao Cai).
description: Published as part of Arefina-Armitage, I. & J, Brian, 2011, The genus Psilotreta Banks (Trichoptera: Odontoceridae) in Vietnam, pp. 1-6 in Insecta Mundi 2011 (180) on page 2, DOI: 10.5281/zenodo.5161030
Nitrate isotopic constraints on routes of nutrient supply to global ocean pycnocline
Creators: name: Fripiat, François
name: Martinez-Garcia, Alfredo
name: Marconi, Dario
name: Fawcett, Sarah E.
name: Sigman, Daniel M.
name: Haug, Gerald H.
Publisher: name: ETH Zurich
Year: 2020

description: EGUsphere
Stellar Proton Event-induced surface radiation dose as a constraint on the habitability of terrestrial exoplanets
Creators: name: Atri, Dimitra
Publisher: name: arXiv
Year: 2019
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Space Physics (physics.space-ph)
subject: FOS: Physical sciences

description: The discovery of terrestrial exoplanets orbiting in habitable zones around nearby stars has been one of the significant developments in modern astronomy. More than a dozen such planets, like Proxima Centauri b and TRAPPIST-1 e, are in close-in configurations and their proximity to the host star makes them highly sensitive to stellar activity. Episodic events such as flares have the potential to cause severe damage to close-in planets, adversely impacting their habitability. Flares on fast rotating young M stars occur up to 100 times more frequently than on G-type stars which makes their planets even more susceptible to stellar activity. Stellar Energetic Particles (SEPs) emanating from Stellar Proton Events (SPEs) cause atmospheric damage (erosion and photochemical changes), and produce secondary particles, which in turn results in enhanced radiation dosage on planetary surfaces. We explore the role of SPEs and planetary factors in determining planetary surface radiation doses. These factors include SPE fluence and spectra, and planetary column density and magnetic field strength. Taking particle spectra from 70 major solar events (observed between 1956 and 2012) as proxy, we use the GEANT4 Monte Carlo model to simulate SPE interactions with exoplanetary atmospheres, and we compute surface radiation dose. We demonstrate that in addition to fluence, SPE spectrum is also a crucial factor in determining the surface radiation dose. We discuss the implications of these findings in constraining the habitability of terrestrial exoplanets.
description: Accepted in MNRAS Letters
Additional file 2 of Effect of maternal vitamin D supplementation on nasal pneumococcal acquisition, carriage dynamics and carriage density in infants in Dhaka, Bangladesh
Creators: name: Taghivand, Mahgol
name: Pell, Lisa G.
name: Rahman, Mohammed Z.
name: Mahmud, Abdullah A.
name: Ohuma, Eric O.
name: Pullangyeum, Eleanor M.
name: Ahmed, Tahmeed
name: Hamer, Davidson H.
name: Zlotkin, Stanley H.
name: Gubbay, Jonathan B.
name: Morris, Shaun K.
name: Roth, Daniel E.
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Neuroscience
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Computational Biology

description: Additional file 2: Table S2. Effect of maternal vitamin D supplementation on risk of pneumococcal acquisition in infants in Bangladesh using an interval-censored model with a day 7 start.
MOESM1 of Pro-inflammatory cytokines induce cell death, inflammatory responses, and endoplasmic reticulum stress in human iPSC-derived beta cells
Creators: name: Demine, Stéphane
name: Schiavo, Andrea
name: Marín-Cañas, Sandra
name: Marchetti, Piero
name: Cnop, Miriam
name: Eizirik, Decio
Publisher: name: figshare
Year: 2020
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases

description: Additional file 1 Figure S1. Gene expression across stages of differentiation of iPSCs into pancreatic endocrine cells. Figure S2. Expression of IFNγ, IL-1β and IFNα receptors in iPSC-derived pancreatic endocrine cells. Figure S3. IFNγ + IL-1β and IFNα induce apoptosis in iPSC-derived pancreatic endocrine cells. Figure S4. IFNα does not induce apoptosis but elicits a pro-inflammatory response and ER stress in primary human islets. Figure S5. IL-1β + IFNγ induce apoptosis, a pro-inflammatory response and ER stress in primary human islets. Figure S6. Ruxolitinib prevents IL-1β + IFNγ- and IFNα-induced apoptosis, inflammation and ER stress in pancreatic endocrine cells derived from iPSCs. Figure S7. IL-1β + IFNγ and IFNα do not affect basal insulin secretion in beta cells derived from iPSCs. Table S1. RT-qPCR primers. Table S2. Antibodies. Table S3. Human islet donors presently studied.
Selenium to selenoproteins – role in COVID-19
Creators: name: Tomo, Sojit
name: Saikiran, Gangam
name: Banerjee, Mithu
name: Paul, Sushmita
Publisher: name: IfADo - Leibniz Research Centre for Working Environment and Human Factors, Dortmund
Year: 2021
Subjects: COVID-19
selenium
selenoproteins
virally encoded selenoproteins

description: The disruption of antioxidant defense has been demonstrated in severe acute respiratory syndrome due to SARS-CoV infection. Selenium plays a major role in decreasing the ROS produced in response to various viral infections. Selenoprotein enzymes are essential in combating oxidative stress caused due to excessive generation of ROS. Selenium also has a role in inhibiting the activation of NF-κB, thus alleviating inflammation. In viral infections, selenoproteins have also been found to inhibit type I interferon responses, modulate T cell proliferation and oxidative burst in macrophages, and inhibit viral transcriptional activators. Potential virally encoded selenoproteins have been identified by computational analysis in different viral genomes like HIV-1, Japanese encephalitis virus (JEV), and hepatitis C virus. This review discusses the role and the possible mechanisms of selenium, selenoproteins, and virally encoded selenoproteins in the pathogenicity of viral infections. Identification of potential selenoproteins in the COVID 19 genome by computational tools will give insights further into their role in the pathogenesis of viral infections.
description: EXCLI Journal; 20:Doc781; ISSN 1611-2156
MOESM2 of Healthcare trajectory of children with rare bone disease attending pediatric emergency departments
Creators: name: Yang, David Dawei
name: Baujat, Geneviève
name: Neuraz, Antoine
name: Garcelon, Nicolas
name: Messiaen, Claude
name: Sandrin, Arnaud
name: Cheron, Gérard
name: Burgun, Anita
name: Pejin, Zagorka
name: Cormier-Daire, Valérie
name: Angoulvant, François
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Additional file 2. List of rare bone diseases diagnoses. This table contains the list and frequency of rare bone disease diagnoses in the children included.
Berry Curvature Dipole in Strained Graphene: a Fermi Surface Warping Effect
Creators: name: Battilomo, Raffaele
name: Scopigno, Niccolo'
name: Ortix, Carmine
Publisher: name: arXiv
Year: 2019
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: It has been recently established that optoelectronic and non-linear transport experiments can give direct access to the dipole moment of the Berry curvature in non-magnetic and non-centrosymmetric materials. Thus far, non-vanishing Berry curvature dipoles have been shown to exist in materials with substantial spin-orbit coupling where low-energy Dirac quasiparticles form tilted cones. Here, we prove that this topological effect does emerge in two-dimensional Dirac materials even in the complete absence of spin-orbit coupling. In these systems, it is the warping of the Fermi surface that triggers sizeable Berry dipoles. We show indeed that uniaxially strained monolayer and bilayer graphene, with substrate-induced and gate-induced band gaps respectively, are characterized by Berry curvature dipoles comparable in strength to those observed in monolayer and bilayer transition metal dichalcogenides.
description: 5 pages, 4 figures. Accepted for publication in Physical Review Letters
Biomarker (brGDGT) degradation and production in lacustrine surface sediments: Implications for paleoclimate reconstructions
Creators: name: De Jonge, Cindy
name: Fiskal, Annika
name: Han, Xingguo
name: Lever, Mark
Publisher: name: ETH Zurich
Year: 2020

description: Branched glycerol dialkyl glycerol tetraethers (brGDGTs) are a class of biomarker lipids that can be conserved over long timescales in lake sediments. Produced throughout the lake water column before settling and incorporation in the sedimentary archive, they are used to reconstruct lake water temperature changes through time. However, it is not clear how degradation and/or production of these compounds in the surface sediments influences the brGDGT signal and the reconstructed temperature record.

Here we present the core lipid (“fossil”) and intact polar lipid (“recently produced”) signal of brGDGT lipids in 8 short cores collected in 4 Swiss lakes, covering a eutrophic gradient. In eutrophic conditions (Lake Baldegg), a clear subsurface (20-35 cm blf) maximum in intact polar lipids is observed (15-20%), whereas the most surficial sediments (0-2 cm blf) show the lowest percentage of IPL lipids (<5%). Our data indicates that tetramethylated brGDGT lipids are produced in the subsurface. As the bacterial community has been reconstructed in all cores, using 16S rRNA gene distribution, we observe that this production is coeval with an increase in the relative abundance of OTUs in the phyla Acetothermia, Aminicenantes, Caldiserica and Spirochaetes. Hexamethylated brGDGTs are encountered in increased amounts in most surficial sediments (0-2 cm bsf), but are degraded further downcore. Both degradation and in-situ production cause the reconstructed temperatures based on the surface sediments to be 2 ℃ colder than those from the subsurface.

In sediments where degradation and subsurface production of brGDGT lipids occurs, this has the potential to impact paleoclimate reconstructions. A colder MBT’5ME signal in surface sediments has indeed been observed in several studies (i.e. Tierney et al., 2012; Miller et al., 2018, Martin et al., 2020). Furthermore, a distinct brGDGT signal in surface sediments has a possible impact on existing lacustrine calibration datasets, as these are based on surface sediments.
description: EGUsphere
D2.2 Initial Semantic Models and Resource Discovery Mechanism
Creators: name: South East European Research Centre
Publisher: name: NebulOuS Project
Year: 2023

description: This document discusses NebulOuS’ approach to resource discovery. It presents the models underpinning NebulOuS’ resource discovery mechanism, including: a declarative model of expressing hyper-distributed components and their deployment characteristics; a declarative model for capturing QoS requirements attached to application components; a semantic representation of the capabilities and characteristics of a pool of CC resources; a model for semantically representing QoS requirements; and finally, a model for determining optimal application component placement based on the current available resource capabilities and characteristics, the component’s QoS requirements, as well as any user-expressed preferences regarding deployment. The document also presents an initial description of a prototype of NebulOuS resource discovery mechanism.

AuthorsSimeon Veloudis, Evangelos Barmpas,  Iraklis Paraskakis (SEERC), Yiannis Verginadis, Andreas Tsagkaropoulos, Ioannis Patiniotakis (ICCS), Geir Horn, Marta Różańska (UiO), Alexandros Sarros (UBI)
Dispersion of tracer particles in a compressible flow
Creators: name: Cressman, John R.
name: Goldburg, Walter I.
name: Schumacher, Joerg
Publisher: name: arXiv
Year: 2004
Subjects: subject: Chaotic Dynamics (nlin.CD)
subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences

description: The turbulent diffusion of Lagrangian tracer particles has been studied in a flow on the surface of a large tank of water and in computer simulations. The effect of flow compressibility is captured in images of particle fields. The velocity field of floating particles has a divergence, whose probability density function shows exponential tails. Also studied is the motion of pairs and triplets of particles. The mean square separation is fitted to the scaling form ~ t^alpha, and in contrast with the Richardson-Kolmogorov prediction, an extended range with a reduced scaling exponent of alpha=1.65 pm 0.1 is found. Clustering is also manifest in strongly deformed triangles spanned within triplets of tracers.
description: 6 pages, 4 figures
title: A multiscale numerical modelling investigation of quartz CPO variation due to flow partitioning
Creators: name: Bhandari, Ankit
name: Jiang, Dazhi
Publisher: name: Deutsche Geologische Gesellschaft - Geologische Vereinigung e.V. (DGGV)
Year: 2020

description: University of Western Ontario, Canada

 Quartz crystallographic preferred orientations (CPOs) in natural mylonites can vary to such an extent that they apparently give opposite senses of shear within a single thin section. Many qualitative explanations have been proposed. Here, we take a multiscale numerical approach to investigate the variation of quartz CPOs resulting from flow partitioning in a ductile shear zone environment. We couple our self-consistent Eshelby formalism for power-law viscous composite materials with the visco-plastic self-consistent (VPSC) model for simulating CPOs in crystalline aggregates. In a quartz-bearing polyphase mylonite, we regard quartz aggregates in the rock as microscale Eshelby inhomogeneities embedded in a macroscale medium (the polyphase continuum). The effective rheology of the continuum is represented by a hypothetical homogeneous equivalent medium and is obtained self-consistently from the constituent phases (e.g., quartz, feldspar and mica grains). We obtain the partitioned flow fields in each quartz aggregate first, using our own Eshelby formalism, and then use the partitioned fields to simulate quartz CPOs, using the VPSC model. We reproduced the observed quartz CPOs and found out that the CPO variation actually reflects a macroscale finite strain gradient rather than vorticity-sense reversal as previously thought. We demonstrated that, despite the microscale flow fields varying from one quartz aggregate to another and from the macroscale flow, the sense of vorticity in all quartz RDEs remains the same as the macroscale vorticity. Our work suggests that quartz c-axis fabrics cannot be effectively used to estimate the macroscale flow vorticity.
Complete regularity of Ellis semigroups of $\mathbb Z$-actions
Creators: name: Barge, Marcy
name: Kellendonk, Johannes
Publisher: name: arXiv
Year: 2020
Subjects: subject: Dynamical Systems (math.DS)
subject: Group Theory (math.GR)
subject: FOS: Mathematics
subject: 54H20, 37B10, 20M17

description: It is shown that the Ellis semigroup of a $\mathbb Z$-action on a compact totally disconnected space is completely regular if and only if forward proximality coincides with forward asymptoticity and backward proximality coincides with backward asymptoticity. Furthermore, the Ellis semigroup of a $\mathbb Z$- or $\mathbb R$-action for which forward proximality and backward proximality are transitive relations is shown to have at most two left minimal ideals. Finally, the notion of near simplicity of the Ellis semigroup is introduced and related to the above.
description: Some statements added, some results simplified
Psilotreta spitzeri Malicky 1995
Creators: name: Arefina-Armitage, I.
name: J, Brian
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Trichoptera
Odontoceridae
Psilotreta
Psilotreta spitzeri

description: Psilotreta spitzeri Malicky
 Psilotreta spitzeri Malicky 1995: 871; Oláh and Johanson 2010: 105.
 Material examined. Vietnam: Vinh Phúc Province, Tam Dao Hill Station, lower waterfall of stream flowing through town, UV light, 11 May 1996, B. Hubley, C. Darling, 1 male, 1 female, ROM 961030, ROME.
 Distribution. Vietnam (Tam Dao National Park*, Vinh Phúc).
description: Published as part of Arefina-Armitage, I. & J, Brian, 2011, The genus Psilotreta Banks (Trichoptera: Odontoceridae) in Vietnam, pp. 1-6 in Insecta Mundi 2011 (180) on pages 2-3, DOI: 10.5281/zenodo.5161030
Are citizen science projects multi-disciplinary research activities?
Creators: name: Manske, Sven
Publisher: name: Zenodo
Year: 2021
Subjects: citizen science
EU project
Horizon 2020

description: The majority (58%) of Zooniverse projects is multi-disciplinary Most of the projects cover between 1 and 5 research areas  Citizen science projects incorporate the perspectives of volunteers, practitioners, and scientists (among others) in different fields of science and applications. However, successful examples like “Galaxy Zoo” show that a narrow research orientation can help to streamline the crowd efforts and might lead to a higher scientific output. While examples like the Galaxy Zoo can be easily assigned to a single research area, other projects tend to have a multi-faceted or even multi-disciplinary orientation (e.g., the “Wild Mont-Blanc” project). In this work, we operationalised the question of multi-disciplinarity by assigning research areas to textual project descriptions based on computational text analytics. Thus, we identify a project as multi-disciplinary if it was assigned to more than one research area. How to interpret this data  We analysed 218 project descriptions using text-analytics based on explicit semantic analysis [1]. The research areas are mapped using the web of science taxonomy. This consists of research categories with a certain number of research areas per category. Figure 1 shows the relative amount of multi-disciplinary projects. 58% of the projects have been assigned to more than one research area and thus count as multi-disciplinary. Figure 2 presents the concrete numbers of projects that have a certain number of research areas. That some projects have a high number of associated research areas is caused by unclear textual project descriptions, which include many specific terms that are bound to the associated research areas. References [1] Gabrilovich, E., & Markovitch, S. (2007, January). Computing semantic relatedness using wikipedia-based explicit semantic analysis. In IJcAI (Vol. 7, pp. 1606-1611). If you'd like to discuss further check out this graphical article in our eMagazine.
Additional file 3 of Effect of maternal vitamin D supplementation on nasal pneumococcal acquisition, carriage dynamics and carriage density in infants in Dhaka, Bangladesh
Creators: name: Taghivand, Mahgol
name: Pell, Lisa G.
name: Rahman, Mohammed Z.
name: Mahmud, Abdullah A.
name: Ohuma, Eric O.
name: Pullangyeum, Eleanor M.
name: Ahmed, Tahmeed
name: Hamer, Davidson H.
name: Zlotkin, Stanley H.
name: Gubbay, Jonathan B.
name: Morris, Shaun K.
name: Roth, Daniel E.
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Neuroscience
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Computational Biology

description: Additional file 3: Table S3. Effects of maternal vitamin D supplementation of varying doses on the risk of pneumococcal acquisition using a Cox proportional hazard model with day 0 start.
Non-post-selection entanglement concentration by ordinary linear optical devices
Creators: name: Xiang-bin, Wang
name: Heng, Fan
Publisher: name: arXiv
Year: 2003
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Two remote parties, Alice and Bob initially share some non-maximally entangled states. Through the entanglement concentration by local operation and classical communication(LOCC), they may obtain an outcome of maximally entangled states in the price of decreasing the number of pairs shared by them. Recently, entanglement concentration have been experimently demonstrated by post-selection (T. Yamamoto et al, Nature, 421, 343(2003) and Z. Zhao et al, quant-ph/0301118). Here we give a modified scheme which can be used for the entanglement concentration without any post selection by using only practically existing linear optical devices. In particular, a sophisticated photon detector to distinguish one photon or two photons is not required. Our scheme can be used to really produce the event-ready maximally entangled pairs through LOCC provided that the requested raw pairs are supplied deterministically. A detailed experimental plan with spontaneous parametric down conversion(SPDC) is shown.
description: Published in Phys. Rev. A as a Rapid communication already. This paper was orally reported in the 2nd Asia Pacific workshop of Quantum Information Processing, SIngapore. Some related references are added. Some related references are added
Quasars Have Fewer Close Companions than Normal Galaxies
Creators: name: Yue, Minghao
name: Fan, Xiaohui
name: Schindler, Jan-Torge
name: McGreer, Ian D.
name: Huang, Yun-Hsin
Publisher: name: arXiv
Year: 2019
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We investigate the distribution of companion galaxies around quasars using {\em Hubble Space Telescope} ({\em HST}) Advanced Camera for Surveys Wide Field Camera (ACS/WFC) archival images. Our master sample contains 532 quasars which have been observed by {\em HST} ACS/WFC, spanning a wide range of luminosity $(-3190\%)$ even for the faintest companions of interest. The number of physical companions is estimated by subtracting a background density from the number density of projected companions. We divide all the companions into three groups (faint, intermediate and bright) according to their fluxes. A control sample of galaxies is constructed to have similar redshift distribution and stellar mass range as the quasar sample using the data from {\em HST} deep fields. We find that quasars and control sample galaxies have similar numbers of faint and bright companions, while quasars show a $3.7σ$ deficit of intermediate companions compared to galaxies. The numbers of companions in all three groups do not show strong evolution with redshift, and the number of intermediate companions around quasars decreases with quasar luminosity. Assuming that merger-triggered quasars have entered the final coalescence stage during which individual companions are no longer detectable at large separations, our result is consistent with a picture in which a significant fraction of quasars is triggered by mergers.
description: 18 pages, 10 figures, accepted by ApJ
ELIXIR INTOXICOM WP1 workshop - FAIR AOPs Introduction
Creators: name: Nymark, Penny
Publisher: name: Zenodo
Year: 2024
Subjects: Adverse Outcome Pathways
FAIR data
FAIR principles

description: This short introduction to FAIR AOPs was given prior to an extensive overview of the field by Clemens Wittwehr at the ELIXIR INTOXICOM WP1 workshop in Utrecht, 29th May, 2024. Both presentations are based on the publication "Why adverse outcome pathways need to be FAIR" (https://doi.org/10.14573/altex.2307131).
MOESM1 of Healthcare trajectory of children with rare bone disease attending pediatric emergency departments
Creators: name: Yang, David Dawei
name: Baujat, Geneviève
name: Neuraz, Antoine
name: Garcelon, Nicolas
name: Messiaen, Claude
name: Sandrin, Arnaud
name: Cheron, Gérard
name: Burgun, Anita
name: Pejin, Zagorka
name: Cormier-Daire, Valérie
name: Angoulvant, François
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified

description: Additional file 1. Classification of 3 levels of medical complexity. Additional file containing the definition of medical complexity according to Simon et al., 2014 [20].
Revisiting Lake Garba Guracha, high altitude lake in the Bale Mountains, Ethiopia: reconstructing Late Glacial - Holocene lake level history using δ2H/δ18O biomarker analyses
Creators: name: Bittner, Lucas
name: Bliedtner, Marcel
name: Grady, Dai
name: Gil-Romera, Graciela
name: Martin-Jones, Catherine
name: Lemma, Bruk
name: Lamp, Henry F.
name: De Jonge, Cindy
name: Meyer, Hanno
name: Glaser, Bruno
name: Zech, Michael
Publisher: name: ETH Zurich
Year: 2020

description: Our knowledge of East African paleoclimate is largely based on marine core and paleolimnological reconstructions. Accordingly, more humid climatic conditions such as the African Humid Period (AHP) are usually associated with summer insolation-driven increased monsoonal precipitation and the movement of the Congo Air Boundary.

In order to contribute to this discussion and to reconstruct the paleoclimate of the afro-alpine Bale Mountains, Ethiopia, within the DFG Research Unit 2358 ‘The Mountain Exile Hypothesis: How humans benefited from and re-shaped African high-altitude ecosystems during Quaternary climate changes’ we re-cored Lake Garba Guracha. This site represents one of the best dated Late Glacial - Holocene continuous, high altitude (3950 m asl) paleoenvironmental archives in East Africa.
We investigated sugar and lipid biomarkers and their compound-specific stable oxygen and hydrogen isotopic composition (δ18Osugar and δ2Hn-alkane) to infer past hydrological patterns. The δ18Osugar record reflects lake water and can thus be used to reconstruct lake evaporation history.

Our results suggest that a virtually permanent lake overflow existed from about 10 to 7 cal. ka BP, whereas the period from about 7 to 5 cal. ka BP is characterised by increased lake evaporation. We present initial results of δ18Odiatom analyses and organic geochemical and XRF data that document dominant minerogenic input during the Late Glacial and increased input of almost exclusively aquatic organic matter from 11 cal. ka BP on. Reconstructed mean annual temperatures (n=20, -2.2 to 2.5°C), inferred from brGDGT-based proxies, indicate that colder conditions prevailed in the high-altitude Bale Mountain ecosystem during the Younger Dryas.
description: EGUsphere
The effect of Cu substitution on the A1g mode of La(0.7)Sr(0.3)MnO3 manganites
Creators: name: De Marzi, G.
name: Trodahl, H. J.
name: Bok, J.
name: Cantarero, A.
name: Sapina, F.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: We report on the first Raman data of Cu substituted La(1-y)Sr(y)Mn(1-x)Cu(x)O3 (0 < x < 0.10 and 0.17 < y < 0.3, accordingly in order to have the same Mn(4+)/[Mn(4+)+Mn(3+)] ratio), collected in the frequency range 100-900 cm-1 and at room temperature, with parallel and crossed polarizations of the incident and scattered light. Spectra were fitted with a Drude-Lorentz model, and peaks at 190-220 and 430 cm-1, together with two broad structures centered at near 500 and 670 cm-1, have been found. We also have observed that the A1g mode is substantially shifted with increasing Cu substitution. The A1g phonon shift is a linear function of the tolerance factor t and the rhombohedral angle, thus following the structural changes of the MnO6 octahedra in the system.
description: 6 pages, 4 figures, SSC (accepted)
Mapping landslides from EO data using deep-learning methods
Creators: name: Prakash, Nikhil
name: Manconi, Andrea
name: Loew, Simon
Publisher: name: ETH Zurich
Year: 2020

description: Landslide hazard has always been a significant source of economic losses and fatalities in the mountainous regions. Knowledge of the spatial extent of the past and present landslide activity, compiled in the form of a landslide inventory map, is essential for effective risk management. High-resolution data acquired by Earth observation (EO) satellites are often used to map landslides by identifying morphological expressions that can be associated with past and/or recent deformation. This is a slow and difficult process as it requires extensive manual efforts. As a result, such maps are not readily available for all the landslide hazard affected regions. Fully automated methods are required to exploit the exponentially increasing amount of EO data available for landslide hazard assessments. In this context, conventional methods like pixel-based and object-based machine learning strategies have been studied extensively in the last decade. Recent advances in convolutional neural network (CNN), a type of deep-learning method, has outperformed other conventional learning methods in similar image interpretation tasks. In this work, we present a deep-learning based method for semantic segmentation of landslides from EO images. We present the results from a study area in the south of Portland in Oregon, USA. The landslide inventory for training and ground truth was extracted from the Statewide Landslide Information Database of Oregon (SLIDO). We were able to achieve a probability of detection (POD) greater than 0.70. This method can also be extended to be used for rapid mapping of landslides after a major triggering event (like earthquake or extreme metrological event) has occurred.
description: EGUsphere
Peruveleon Miller and Stange 2011, new genus
Creators: name: Miller, Robert B.
name: Stange, Lionel A.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Neuroptera
Myrmeleontidae
Peruveleon

description: Peruveleon Miller and Stange, new genus
 Type species: Brachynemurus camposi Banks, by present designation.
description: Published as part of Miller, Robert B. & Stange, Lionel A., 2011, Antlions of Hispaniola (Neuroptera: Myrmeleontidae), pp. 1-28 in Insecta Mundi 2011 (182) on page 6, DOI: 10.5281/zenodo.5161058
A young galaxy cluster in the old Universe
Creators: name: Hashimoto, Tetsuya
name: Goto, Tomotsugu
name: Momose, Rieko
name: Ho, Chien-Chang
name: Makiya, Ryu
name: Chiang, Chia-Ying
name: Kim, Seong Jin
Publisher: name: arXiv
Year: 2019
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: Galaxies evolve from a blue star-forming phase into a red quiescent one by quenching their star formation activity. In high density environments, this galaxy evolution proceeds earlier and more efficiently. Therefore, local galaxy clusters are dominated by well-evolved red, elliptical galaxies. The fraction of blue galaxies in clusters monotonically declines with decreasing redshift, i.e., the Butcher-Oemler effect. In the local Universe, observed blue fractions of massive clusters are as small as $\lesssim$ 0.2. Here we report a discovery of a \lq \lq blue cluster\rq \rq, that is a local galaxy cluster with an unprecedentedly high fraction of blue star-forming galaxies yet hosted by a massive dark matter halo. The blue fraction is 0.57, which is 4.0 $σ$ higher than those of the other comparison clusters under the same selection and identification criteria. The velocity dispersion of the member galaxies is 510 km s$^{-1}$, which corresponds to a dark matter halo mass of 2.0$^{+1.9}_{-1.0}\times 10^{14}$ M$_{\odot}$. The blue fraction of the cluster is more than 4.7 $σ$ beyond the standard theoretical predictions including semi-analytic models of galaxy formation. The probability to find such a high blue fraction in an individual cluster is only 0.003\%, which challenges the current standard frameworks of the galaxy formation and evolution in the $Λ$CDM Universe. The spatial distribution of galaxies around the blue cluster suggests that filamentary cold gas streams can exist in massive halos even in the local Universe. However these cold streams have already disappeared in the theoretically simulated local universes.
description: Accepted in MNRAS. Summary of the paper can be found at https://www.youtube.com/watch?v=jzH4WU0n77w&feature=youtu.be
SOUTH AMERICAN COUNTRIES DEMAND FOR WHEAT IMPORTS AND U. S. MARKET SHARE: SETS OF DISTURBANCE RELATED FUNCTIONS
Creators: name: Shalaby, Seif
name: Hassler, James B.
name: Shalaby, Seif
name: Hassler, James B.
Publisher: name: Unknown
Year: 1985
Subjects: Crop Production/Industries
International Relations/Trade

description: Import demand functions for wheat were estimated for seven South American countries in a set of SUR equations. United States shares were estimated by another set. Kravis-Heston-Summers RGDP series adjusted for purchasing power parities were used as income proxies, and border pr1ce deflators were designed to reflect changes in consumer prices and exchange rates. Countries were found to respond to border price, income, and exchange rate changes. Price and income coefficients were tested for equality across countr1es, failure of the test suggested that regional aggregation may be improper. Since exchange rates were highly elastic, recommendations were made to reactivate local currency sales and to increase exports under barter.
Additional file 1: of Adipocyte-derived IL-6 and leptin promote breast Cancer metastasis via upregulation of Lysyl Hydroxylase-2 expression
Creators: name: He, Jin-Yong
name: Wei, Xiao-Hui
name: Li, Si-Jing
name: Liu, Yang
name: Hu, Hao-Lin
name: Li, Zheng-Zheng
name: Kuang, Xin-Hong
name: Wang, Lai
name: Shi, Xin
name: Yuan, Sheng-Tao
name: Sun, Li
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Virology

description: Table S1. Sequences of the primers used to detect gene expression by qRT-PCR. Table S2. Characterization of the antibodies used in this study. Table S3. Sequences of the small interfering RNAs targeting OBR. (DOCX 15 kb)
MOESM7 of Tissue-specific gene expression and protein abundance patterns are associated with fractionation bias in maize
Creators: name: Walsh, Jesse
name: Woodhouse, Margaret
name: Andorf, Carson
name: Sen, Taner
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology

description: Additional file 7. Expanded description of methods, software, and parameters used in this study.
Equity and Financing in Water Resources Development
Creators: name: Gollehon, Noel R.
name: Supalla, Raymond J.
name: Gollehon, Noel R.
name: Supalla, Raymond J.
Publisher: name: Unknown
Year: 1985
Subjects: Financial Economics
Research and Development/Tech Change/Emerging Technologies
Resource /Energy Economics and Policy

description: This paper summarizes the results of a systems approach to water development issues concerning the Platte River in Nebraska. This approach enabled the production of numerous tradeoff curves which show the implications of the different choices available to decision makers. The particular tradeoffs considered in this paper were those concerning project financing and the associated equity implications. It was found that there are major choices to be made regarding financing from current account versus debt capital. This basic financing choice has a major effect on inter temporal equity. The analysis also illustrated the interrelationships between financing and user group equity.
The density of rational points in curves and surfaces
Creators: name: Heath-Brown, D. R.
name: Colliot-Thélène, J. -L.
Publisher: name: arXiv
Year: 2004
Subjects: subject: Number Theory (math.NT)
subject: FOS: Mathematics

description: Let $X$ be an algebraic variety, defined over the rationals. This paper gives upper bounds for the number of rational points on $X$, with height at most $B$, for the case in which $X$ is a curve or a surface. In the latter case one excludes from the counting function those points that lie on lines in the surface. The bounds are uniform for all $X$ of a given degree. They are best possible in the case of curves. As an application it is shown that if $F$ is an irreducible binary form of degree 3 or more then almost all integers represented by $F$ have essentially one such representation.
description: 46 pages, published version; appendix by J.-L. Colliot-Th\'el\`ene
EXPANDING BEEF EXPORTS TO JAPAN: Background, Opportunities, and Strategies
Creators: name: Lin, Biing-Hwan
name: Mori, Hiroshi
name: Lin, Biing-Hwan
name: Mori, Hiroshi
Publisher: name: Unknown
Year: 1992
Subjects: International Relations/Trade
Livestock Production/Industries

description: Japan is the leading export market for U.S. beef and veal products importing about 203,483 metric tons valued at approximately 1.28 billion dollars in 1989.1/ The potential for exporting beef to Japan has received intensive interest since the signing of the 1988 Japanese Beef Market Access Agreement. Under the agreement, import quotas and the government's involvement in beef import will be replaced with higher tariffs and direct negotiations between Japanese importers and exporters starting in April 1991, promising easier access to the Japanese beef market. During the past decade, analysts in both private and public organizations have devoted substantial effort to studying the Japanese beef market. However, misconceptions of the market still exist. The main purposes of this paper are to improve our understanding of the Japanese beef market and to study the profitability of a proposed production/marketing strategy for expanding beef exports to Japan.
Additional file 4 of Effect of maternal vitamin D supplementation on nasal pneumococcal acquisition, carriage dynamics and carriage density in infants in Dhaka, Bangladesh
Creators: name: Taghivand, Mahgol
name: Pell, Lisa G.
name: Rahman, Mohammed Z.
name: Mahmud, Abdullah A.
name: Ohuma, Eric O.
name: Pullangyeum, Eleanor M.
name: Ahmed, Tahmeed
name: Hamer, Davidson H.
name: Zlotkin, Stanley H.
name: Gubbay, Jonathan B.
name: Morris, Shaun K.
name: Roth, Daniel E.
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Neuroscience
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Computational Biology

description: Additional file 4: Table S4. Effects of maternal vitamin D supplementation of varying doses on the risk of pneumococcal acquisition using a Cox proportional hazard model with day 7 start.
D1.4 Project Website
Creators: name: Lindeque, Colin
name: Parry, huw
Publisher: name: SteamBioAfrica
Year: 2023
Subjects: subject: World wide web

description: This deliverable report D1.4, Project Website, confirms that the project web site was designed and went live on 26th November 2021 on schedule. www.steambioafrica.comThis report includes the design of the look and feel of the project, including thematic colours, fonts, and a project logo. The website site map along with its functionality were then developed and populated with content. The website is now online and is undergoing search engine optimisation to maximise visibility.The website will enable high visibility of the project and help to generate new leads. It will keep stakeholders and the public informed of project updates and related events and provide credibility to the project.
Efficient Ab-initio Multiplet Calculations for Magnetic Adatoms on MgO
Creators: name: Wolf, C.
name: Delgado, F.
name: Reina, J.
name: Lorente, N.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Scanning probe microscopy and spectroscopy, and more recently in combination with electron spin resonance, have allowed the direct observation of electron dynamics on the single-atom limit. The interpretation of data is strongly depending on model Hamiltonians. However, fitting effective spin Hamiltonians to experimental data lacks the ability to explore a vast number of potential systems of interest. By using plane-wave density functional theory (DFT) as starting point, we build a multiplet Hamiltonian making use of maximally-localized Wannier functions. The Hamiltonian contains spin-orbit and electron-electron interactions needed to obtain the relevant spin dynamics. The resulting reduced Hamiltonian is solved by exact diagonalization. We compare three prototypical cases of 3d transition metals Mn (total spin $S=5/2$), Fe ($S=2$) and Co ($S=3/2$) on MgO with experimental data and find that our calculations can accurately predict the spin orientation and anisotropy of the magnetic adatom. Our method does not rely on experimental input and permits us to explore and predict the fundamental magnetic properties of adatoms on surfaces.
description: 13 figures. It includes Supplementary Material
Myrmeleon Linnaeus 1767
Creators: name: Miller, Robert B.
name: Stange, Lionel A.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Neuroptera
Myrmeleontidae
Myrmeleon

description: Myrmeleon Linnaeus
 Myrmeleon Linnaeus 1767: 913. Type species: Myrmeleon formicarium Linnaeus, by subsequent designation by Latreille 1810:435 [as Myrmeleon formacarium, Fab. (sic)].
 Diagnosis. Adult: body length size 22 to 32 mm, forewing length 20 to 25 mm. Antennal fossae separated by more than diameter of scape; forewing vein CuP originates at or very near (about cubital vein diameter) basal cross vein; forewing vein 2A variable in form; forewing vein 2A runs close to lA for short distance, then bends at sharp angle toward 3A; hindwing vein CuA connected to posterior fork of MP2 by cross veins; hindfemur without sense hair; tibial spurs and tarsal claws well developed, not arched or bent; ventral surface of distal tarsomere with all setae reduced to less than one-third width of tarsomere; hindwing with four or more presectoral cross veins; male pilula axillaris present; male abdomen without hair pencils; male ectoproct without postventral lobe.
 Discussion. This cosmopolitan genus contains more described species than any other genus. One key character of Myrmeleon is the chaetotaxy of the distal tarsomere. The ventral setae of distal tarsomere are less than 1/3 the length of tarsomere diameter. Also, the wing venation is distinctive with more than four presectoral crossveins in the hindwing and the forewing vein 2A runs close to 1A for a short distance and then bends at a sharp angle toward 3A. The larvae construct pitfall traps and can only move backwards.
description: Published as part of Miller, Robert B. & Stange, Lionel A., 2011, Antlions of Hispaniola (Neuroptera: Myrmeleontidae), pp. 1-28 in Insecta Mundi 2011 (182) on pages 8-9, DOI: 10.5281/zenodo.5161058
D1.4 Project Website
Creators: name: Lindeque, Colin
name: Parry, huw
Publisher: name: SteamBioAfrica
Year: 2021
Subjects: subject: World wide web

description: This deliverable report D1.4, Project Website, confirms that the project web site was designed and went live on 26th November 2021 on schedule. www.steambioafrica.comThis report includes the design of the look and feel of the project, including thematic colours, fonts, and a project logo. The website site map along with its functionality were then developed and populated with content. The website is now online and is undergoing search engine optimisation to maximise visibility.The website will enable high visibility of the project and help to generate new leads. It will keep stakeholders and the public informed of project updates and related events and provide credibility to the project.