cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Compilation by stochastic Hamiltonian sparsification
Creators: name: Ouyang, Yingkai
name: White, David R.
name: Campbell, Earl T.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Simulation of quantum chemistry is expected to be a principal application of quantum computing. In quantum simulation, a complicated Hamiltonian describing the dynamics of a quantum system is decomposed into its constituent terms, where the effect of each term during time-evolution is individually computed. For many physical systems, the Hamiltonian has a large number of terms, constraining the scalability of established simulation methods. To address this limitation we introduce a new scheme that approximates the actual Hamiltonian with a sparser Hamiltonian containing fewer terms. By stochastically sparsifying weaker Hamiltonian terms, we benefit from a quadratic suppression of errors relative to deterministic approaches. Relying on optimality conditions from convex optimisation theory, we derive an appropriate probability distribution for the weaker Hamiltonian terms, and compare its error bounds with other probability ansatzes for some electronic structure Hamiltonians. Tuning the sparsity of our approximate Hamiltonians allows our scheme to interpolate between two recent random compilers: qDRIFT and randomized first order Trotter. Our scheme is thus an algorithm that combines the strengths of randomised Trotterisation with the efficiency of qDRIFT, and for intermediate gate budgets, outperforms both of these prior methods.
description: 17 pages, 1 figure, 1 algorithm
Quantum Computing and Nuclear Magnetic Resonance
Creators: name: Jones, J. A.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Quantum information processing is the use of inherently quantum mechanical phenomena to perform information processing tasks that cannot be achieved using conventional classical information technologies. One famous example is quantum computing, which would permit calculations to be performed that are beyond the reach of any conceivable conventional computer. Initially it appeared that actually building a quantum computer would be extremely difficult, but in the last few years there has been an explosion of interest in the use of techniques adapted from conventional liquid state nuclear magnetic resonance (NMR) experiments to build small quantum computers. After a brief introduction to quantum computing I will review the current state of the art, describe some of the topics of current interest, and assess the long term contribution of NMR studies to the eventual implementation of practical quantum computers capable of solving real computational problems.
description: 8 pages pdf including 6 figures. Perspectives article commissioned by PhysChemComm
Detuning primordial black hole dark matter with early matter domination and axion monodromy
Creators: name: Ballesteros, Guillermo
name: Rey, Julián
name: Rompineve, Fabrizio
Publisher: name: arXiv
Year: 2019
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We present a scenario that ameliorates the tuning problems present in models of primordial black hole dark matter from inflation. Our setup employs the advantages of gravitational collapse in a long epoch of early matter domination with reheating temperature $\lesssim 10^{6}~\text{GeV}$. Furthermore, we make use of a string-inspired class of models where the inflaton is identified with a non-compact axion field. In this framework, the presence of multiple local minima in the inflaton potential can be traced back to an approximate discrete shift symmetry. This scenario allows the formation of primordial black holes in the observationally viable range of masses ($M_{\text{PBH}}\sim 10^{-13}M_{\odot}-10^{-16}M_{\odot}$) accounting for all dark matter, and in excellent agreement with the CMB. Crucially, we find a significant reduction in the required tuning of the parameters of the inflationary potential, in contrast to the standard case of primordial black hole formation during radiation domination. However, abundant formation of light PBHs during an early phase of matter domination can be more easily in conflict with evaporation bounds. We discuss how these can be avoided under mild assumptions on the collapsing energy density fraction.
description: 33 pages. Discussion on evaporation bounds improved. Published on JCAP
Meriken shinshi, 5
米利幹新誌 五
Creators: name: Tsurumine, Shigenobu, 1788-1859.
Publisher: name: [place of publication unknown] : Shunjitsurō
Year: 2020

description: This may be the first printed Japanese book exclusively about America. Contents: (Beans 1855.7) 萬國地球全圖 Bankoku chikyū zenzu (Map of the countries on the globe). -- v. 1 leaf 2-3; (Beans 1855.8) 南北亜墨利加全圖 Nanboku Amerika zenzu (Map of South and North America). -- v. 1 leaf 3-4; (Beans 1855.9) 共和政治三十一洲全圖 Kyōwa seiji sanjūisshū zenzu (Map of 31 states of the United States). -- v. 2 leaf 5-6.
MOESM1 of Organoids of epithelial ovarian cancer as an emerging preclinical in vitro tool: a review
Creators: name: Dumont, Sander
name: Ziga Jan
name: Heremans, Ruben
name: Gorp, Toon Van
name: Vergote, Ignace
name: Timmerman, Dirk
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Cancer
subject: Inorganic Chemistry
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Table S1. Search terms concerning reviews of organoids. Table S2. Search terms concerning organoids of epithelial ovarian tissue or fallopian tissue. Table S3. Articles about organoids of epithelial ovarian or fallopian tissue.
One-loop Effective Actions in Shape-invariant Scalar Backgrounds
Creators: name: Kim, Chanju
name: Kwon, O-Kab
name: Lee, Choonkyu
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The field-theoretic one-loop effective action in a static scalar background depending nontrivially on a single spatial coordinate is related, in the proper-time formalism, to the trace of the evolution kernel (or heat kernel) for an appropriate, one dimensional, quantum-mechanical Hamiltonian. We describe a recursive procedure applicable to these traces for shape-invariant Hamiltonians, resolving subtleties from the continuum mode contributions by utilizing the expression for the regularized Witten index. For some cases which include those of domain-wall-type scalar backgrounds, our recursive procedure yields the full expression for the scalar or fermion one-loop effective action in both (1+1) and (3+1)-dimensions.
description: 11 pages, LaTeX2e
Emergence of simple patterns in many-body systems: from macroscopic objects to the atomic nucleus
Creators: name: Ruiz, R. F. Garcia
name: Vernon, A. R.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Nuclear Experiment (nucl-ex)
subject: Adaptation and Self-Organizing Systems (nlin.AO)
subject: Atomic Physics (physics.atom-ph)
subject: History and Philosophy of Physics (physics.hist-ph)
subject: Popular Physics (physics.pop-ph)
subject: FOS: Physical sciences

description: Strongly correlated many-body systems often display the emergence of simple patterns and regular behaviour of their global properties. Phenomena such as clusterization, collective motion and appearance of shell structures are commonly observed across different size, time, and energy scales in our universe. Although at the microscopic level their individual parts are described by complex interactions, the collective behaviour of these systems can exhibit strikingly regular patterns. This contribution provides an overview of the experimental signatures that are commonly used to identify the emergence of shell structures and collective phenomena in distinct physical systems. Examples in macroscopic systems are presented alongside features observed in atomic nuclei. The discussion is focused on the experimental trends observed for exotic nuclei in the vicinity of nuclear closed-shells, and the new challenges that recent experiments have posed in our understanding of emergent phenomena in nuclei.
description: Invited contribution prepared for the special issue of "The tower of effective (field) theories and the emergence of nuclear phenomena
One-Time Shot-Noise Unit Calibration Method for Continuous-Variable Quantum Key Distribution
Creators: name: Zhang, Yi-Chen
name: Huang, Yundi
name: Chen, Ziyang
name: Li, Zhengyu
name: Yu, Song
name: Guo, Hong
Publisher: name: arXiv
Year: 2019
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The shot-noise unit in continuous-variable quantum key distribution plays an important and fundamental role in experimental implementation as it is used as a normalization parameter that contribute to perform security analysis and distill the key information. However, the traditional calibration procedure and detector model can not cover all system noise in practical application, which will result in some loopholes and influence the practical security. What's more, the traditional procedure is also rather complicated and has difficulty in compatible with automatic operating system. In this paper we propose a calibration model based on the proposed trusted detector model, which could naturally close the loopholes in practical application. It can help identify the shot-noise unit in only one step, which can not only effectively simplify the evaluation process but also reduce the statistical fluctuation, while two steps are needed in traditional method. We prove its feasibility and derive the complete version of the corresponding entanglement-based model. Detailed security analysis against arbitrary collective attacks and numerous simulation results in both the asymptotic limit regime and the finite-size regime are provided. A proof-of-principle experiment has been implemented and the results indicate that the one-time-calibration model can be employed as a powerful substitution to calibrate the shot-noise unit. Our method paves the way for the deployment of continuous-variable quantum key distribution with real time calibration and automatic operation.
description: 17 pages, 12 figures
Moisture and temperature effects on the radiocarbon signature of respired carbon dioxide to assess stability of soil carbon in the Tibetan Plateau
Creators: name: Tangarife-Escobar, Andres
name: Guggenberger, Georg
name: Feng, Xiaojuan
name: Dai, Guohua
name: Urbina-Malo, Carolina
name: Azizi-Rad, Mina
name: Sierra, Carlos
Publisher: name: Zenodo
Year: 2023
Subjects: Qinghai-Tibetan Plateau (QTP)
Soil organic matter (SOM)
Radiocarbon (14C)
Incubation
Transit time
Age
Peatland
Grassland

description: Radiocarbon data set and code for the prediction of D14C values in bulk soil and respired CO2.
description: This study was developed as part of the International Research Training Group (GRK 2309/1) \Geo-ecosystems in transition on the Tibetan Plateau" (TransTiP) funded by the Deutsche Forschungsgemeinschaft (DFG).
MOESM1 of Template-switching artifacts resemble alternative polyadenylation
Creators: name: Balázs, Zsolt
name: Tombácz, Dóra
name: Csabai, Zsolt
name: Moldován, Norbert
name: Snyder, Michael
name: Boldogkői, Zsolt
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Additional file 1: Figure S1. Comparison of the cDNA and dRNA sequencing results of all potential poly(A) sites. In addition to Fig. 2, Additional file 1 Figure S1 contains the results of potential poly(A) sites that were supported by 10 or less cDNA sequencing reads as well. (a) The proportion of potential poly(A) sites that were supported by dRNA sequencing for the HCMV (purple, n = 403) and the human (orange, n = 87,980) datasets. (b) The performance of the different filtering methods. The left side shows the true positive predictive value of the internal-priming (red) and template-switching (blue) filters based on the dRNA sequencing results (positive predictive value ~ kept sites which are also detected in dRNA Seq). The human potential poly(A) sites were filtered using SQANTI (yellow) and also based on whether or not they were found in the PolyA_DB (green). The right side of the panel shows the proportion of potential poly(A) sites filtered out by the different filtering options, which were not supported by dRNA sequencing (~ positive predictive value). (c) Barplot of the number of potential poly(A) sites in regions with different adenine-content in the HCMV (left) and (right) human dataset. The features that the filtering algorithm characterized as TES are marked in blue, the putative artefacts are marked in red. (d) The positive predictive value of the different filtering methods is shown as a function of the adenine content. The HCMV results are not detailed because the low number of TESs contained in that dataset would not provide for a meaningful analysis.
MOESM1 of Epitope‐based peptide vaccine design and target site depiction against Middle East Respiratory Syndrome Coronavirus: an immune-informatics study
Creators: name: Qamar, Muhammad Tahir Ul
name: Saleem, Saman
name: Ashfaq, Usman
name: Amna Bari
name: Anwar, Farooq
name: Safar Alqahtani
Publisher: name: figshare
Year: 2019
Subjects: subject: Biophysics
subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: Evolutionary Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Figure S1. PSIPRED analysis of the MERS-COV S protein. Helixes are cylindrical and coloured pink, beta-strands are shown as arrows and coloured yellow, and random coil regions are black. Figure S2. The 3D structure of the MERS-COV S protein (front and back conformations). Figure S3. Multiple sequence alignment showing conservation of the S protein of MERS-COV isolated from eight distinct countries. Figure S4. 3D (A1–6) and stick structures (B1–6) representation of selected MHC class-I alleles binding peptides. The figure is in symmetry with the information provided in Table 3. Figure S5. 2D graphical representation of interaction analyses between human HLA-B7 protein and MHC class-I alleles binding peptides. The figure is in symmetry with the information provided in Table 6 and Fig. 6 and showing the residues interacting with strong hydrogen bonding.
Additional file 1 of Knowledge domain and emerging trends in multimorbidity and frailty research from 2003 to 2023: a scientometric study using citespace and VOSviewer
Creators: name: Deng, Penghong
name: Liu, Chang
name: Chen, Mingsheng
name: Si, Lei
Publisher: name: figshare
Year: 2023
Subjects: Medicine
Biological Sciences not elsewhere classified
Science Policy

description: Supplementary Material 1
Monte Carlo simulations of the classical two-dimensional discrete frustrated $ϕ^4$ model
Creators: name: Savkin, V. V.
name: Rubtsov, A. N.
name: Janssen, T.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: The classical two-dimensional discrete frustrated $ϕ^4$ model is studied by Monte Carlo simulations. The correlation function is obtained for two values of a parameter $d$ that determines the frustration in the model. The ground state is a ferro-phase for $d=-0.35$ and a commensurate phase with period N=6 for $d=-0.45$. Mean field predicts that at higher temperature the system enters a para-phase via an incommensurate state, in both cases. Monte Carlo data for $d=-0.45$ show two phase transitions with a floating-incommensurate phase between them. The phase transition at higher temperature is of the Kosterlitz-Thouless type. Analysis of the data for $d=-0.35$ shows only a single phase transition between the floating-fluid phase and the ferro-phase within the numerical error.
description: 5 figures, submitted to the European Physical Journal B
Flat U-Net: An Efficient Ultralightweight Model for Solar Filament Segmentation in Full-disk H$α$ Images
Creators: name: Zhu, GaoFei
name: Lin, GangHua
name: Yang, Xiao
name: Zeng, Cheng
Publisher: name: arXiv
Year: 2025
Subjects: subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Machine Learning (cs.LG)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: Solar filaments are one of the most prominent features observed on the Sun, and their evolutions are closely related to various solar activities, such as flares and coronal mass ejections. Real-time automated identification of solar filaments is the most effective approach to managing large volumes of data. Existing models of filament identification are characterized by large parameter sizes and high computational costs, which limit their future applications in highly integrated and intelligent ground-based and space-borne observation devices. Consequently, the design of more lightweight models will facilitate the advancement of intelligent observation equipment. In this study, we introduce Flat U-Net, a novel and highly efficient ultralightweight model that incorporates simplified channel attention (SCA) and channel self-attention (CSA) convolutional blocks for the segmentation of solar filaments in full-disk H$α$ images. Feature information from each network layer is fully extracted to reconstruct interchannel feature representations. Each block effectively optimizes the channel features from the previous layer, significantly reducing parameters. The network architecture presents an elegant flattening, improving its efficiency, and simplifying the overall design. Experimental validation demonstrates that a model composed of pure SCAs achieves a precision of approximately 0.93, with dice similarity coefficient (DSC) and recall rates of 0.76 and 0.64, respectively, significantly outperforming the classical U-Net. Introducing a certain number of CSA blocks improves the DSC and recall rates to 0.82 and 0.74, respectively, which demonstrates a pronounced advantage, particularly concerning model weight size and detection effectiveness. The data set, models, and code are available as open-source resources.
description: 15 pages, 5 figures, 3 tables, accepted for publication in ApJ
Comprehensive models of novae at metallicity $Z = 0.02$ and $Z = 10^{-4}$
Creators: name: Chen, Hai-Liang
name: Woods, T. E.
name: Yungelson, L. R.
name: Piersanti, Luciano
name: Gilfanov, M.
name: Han, Zhanwen
Publisher: name: arXiv
Year: 2019
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: Novae are the observational manifestations of thermonuclear runaways on the surface of accreting white dwarfs (WDs). Although novae are an ubiquitous phenomenon, their properties at low metallicity are not well understood. Using the publicly-available stellar evolution code Modules for Experiments in Stellar Astrophysics (MESA), we model the evolution of accreting carbon-oxygen WDs and consider models which accrete matter with metallicity Z=0.02 or $10^{-4}$. We consider both models without mixing and with matter enriched by CO-elements assuming that mixing occurs in the process of accretion (with mixing fraction 0.25). We present and contrast ignition mass, ejected mass, recurrence period and maximum luminosity of novae for different WD masses and accretion rates for these metallicities and mixing cases. We find that models with Z = 0.02 have ignition masses and recurrence periods smaller than models with low Z, while the ejected mass and maximum luminosity are larger. Retention efficiency during novae outbursts decreases with increasing metallicity. In our implementation, inclusion of mixing at the H/He interface reduces accreted mass, ejected mass and recurrence period as compared to the no-mixing case, while the maximum luminosity becomes larger. Retention efficiency is significantly reduced, becoming negative in most of our models. For ease of use, we provide a tabular summary of our results.
description: Accepted by MNRAS, 18 pages, 13 figures
Hyachelia J. L. Barnard 1967
Creators: name: Serejo, Cristiana S.
name: Sittrop, Daniela J.
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Amphipoda
Hyalidae
Hyachelia

description: Hyachelia J.L. Barnard, 1967
 Diagnosis. Maxilla 1 with palp vestigial or reaching base of the outer ramus setal-teeth. Article 4 of maxilliped blunt to triangular with normal (short) or whip-like (very long) distal setae in males. Gnathopods 1–2 subchelate, male gnathopod 2 enlarged and lacking a produced lobe on carpus. All pereopods prehensile with grasping robust setae. Uropod 1 without inter-ramal robust seta. Urosomite 3 obscure, uropod 3 lacking rami, peduncle narrowing distally with 1–2 distal robust setae. Telson formed of two separated lobes narrowing distally.
 Remarks. Hyachelia has been, until the present study, a monotypic genus described by J.L. Barnard (1967), based on the species Hyachelia tortugae J.L. Barnard, 1967, collected from the sea-turtle Chelonia mydas (Linnaeus, 1758) at the Galapagos Islands. With the discovery of H. lowryi sp. nov. some generic characters are herein revised, which expands to some extent its diagnosis as pointed above in a bold text. The reduction in size of the maxillary palp within the Talitroidea is the rule. However, in some species it is partially reduced as seen in Lelehua myersi sp. nov. within the subfamily Hyalinae (reaching the base of the outer lobe setal-teeth); it can be very reduced (not reaching the base of the outer lobe setal-teeth) as seen in H. tortugae and groups such as Talitridae and Dogielinotidae or it can be absent as seen in the chiltoniids (Serejo 2004). Despite these differences in the maxillary palp, and in the maxilliped, unique characters within the Talitroidea, such as the prehensile pereopods 3–7 and the reduction of urosome 3 with lose of rami were observed and are used to maintain these species in the same genus. These characters are probably a response to a commensal lifestyle on sea-turtles. Also, coxae 1–4 do not have posterior processes, a character commonly found in Hyalinae and not in Hyacheliinae (Serejo 2004).
description: Published as part of Serejo, Cristiana S. & Sittrop, Daniela J., 2009, Hyalidae *, pp. 440-452 in Zootaxa 2260 (1) on page 441, DOI: 10.11646/zootaxa.2260.1.24, http://zenodo.org/record/5323848
Secular effects of Ultralight Dark Matter on Binary Pulsars
Creators: name: Blas, Diego
name: Nacir, Diana López
name: Sibiryakov, Sergey
Publisher: name: arXiv
Year: 2019
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Dark matter (DM) can consist of very light bosons behaving as a classical scalar field that experiences coherent oscillations. The presence of this DM field would perturb the dynamics of celestial bodies, either because the (oscillating) DM stress tensor modifies the gravitational potentials of the galaxy, or if DM is directly coupled to the constituents of the body. We study secular variations of the orbital parameters of binary systems induced by such perturbations. Two classes of effects are identified. Effects of the first class appear if the frequency of DM oscillations is in resonance with the orbital motion; these exist for general DM couplings including the case of purely gravitational interaction. Effects of the second class arise if DM is coupled quadratically to the masses of the binary system members and do not require any resonant condition. The exquisite precision of binary pulsar timing can be used to constrain these effects. Current observations are not sensitive to oscillations in the galactic gravitational field, though a discovery of pulsars in regions of high DM density may improve the situation. For DM with direct coupling to ordinary matter, the current timing data are already competitive with other existing constraints in the range of DM masses $\sim 10^{-22}-10^{-18}\,{\rm eV}$. Future observations are expected to increase the sensitivity and probe new regions of parameters.
description: 24 pages, 3 figures, 3 tables; in v2 we introduced new clarifications, updated fig. 3 to include current bounds and agrees with the published version
The asymptotics of the clustering transition for random constraint satisfaction problems
Creators: name: Budzynski, Louise
name: Semerjian, Guilhem
Publisher: name: arXiv
Year: 2019
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Discrete Mathematics (cs.DM)
subject: Probability (math.PR)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences
subject: FOS: Mathematics

description: Random Constraint Satisfaction Problems exhibit several phase transitions when their density of constraints is varied. One of these threshold phenomena, known as the clustering or dynamic transition, corresponds to a transition for an information theoretic problem called tree reconstruction. In this article we study this threshold for two CSPs, namely the bicoloring of $k$-uniform hypergraphs with a density $α$ of constraints, and the $q$-coloring of random graphs with average degree $c$. We show that in the large $k,q$ limit the clustering transition occurs for $α= \frac{2^{k-1}}{k} (\ln k + \ln \ln k + γ_{\rm d} + o(1))$, $c= q (\ln q + \ln \ln q + γ_{\rm d}+ o(1))$, where $γ_{\rm d}$ is the same constant for both models. We characterize $γ_{\rm d}$ via a functional equation, solve the latter numerically to estimate $γ_{\rm d} \approx 0.871$, and obtain an analytic lowerbound $γ_{\rm d} \ge 1 + \ln (2 (\sqrt{2}-1)) \approx 0.812$. Our analysis unveils a subtle interplay of the clustering transition with the rigidity (naive reconstruction) threshold that occurs on the same asymptotic scale at $γ_{\rm r}=1$.
description: 35 pages, 8 figures
Gaiban yōbō zuga, Ken 1
外蕃容貌圖画 乾
Creators: name: Tagawa, Shundō
Publisher: name: Edo : Suharaya Sasuke and fifteen others of Edo
Year: 2021

description: Contents: [世界圖 Sekaizu (Map of the World)]. -- Oval map 21 x 28.2 cm. diam. on 25.2 x 33.5 cm. page. -- In volume 1.
Estimating the Mass Escaping Rates of Radius-valley-spanning Planets in the TOI-431 System via X-Ray and Ultraviolet Evaporation
Creators: name: Jiang, Xiaoming
name: Jiang, Jonathan H.
name: Burn, Remo
name: Zhu, Zong-Hong
Publisher: name: arXiv
Year: 2025
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: TOI-431 system has 3 close-in exoplanets, which gives an ideal lab to study gas escape. In this study, we measure the XUV luminosity for TOI-431 with XMM-Newton/EPIC-pn and OM data, then calculate the fluxes for the planets in the system. We find that, TOI-431 b's $\rm F_{XUV,b}=$$70286^{+12060}_{-2611}$$\rm \ erg\ cm^{-2}s^{-1}$ is 75 times of TOI-431 d $\rm F_{XUV,d}=$$935^{+160}_{-35}$$\rm \ erg\ cm^{-2}s^{-1}$. Adopting the energy limit method and hydrodynamic code $ATES$ with a set of He/H ratios, we obtain the mass-loss rates of $10^{10.51^{+0.07}_{-0.02}}$ g s$^{-1}$ for TOI-431 b, $10^{9.14^{+0.07}_{-0.02}}$ and $10^{9.84\sim 9.94}$ g s$^{-1}$ for TOI-431 d. We predict the $2.93\sim 7.91 \%$ H I Ly$α$ and $0.19\sim 10.65\%$ He I triplet absorption depths for TOI-431 d, thus its gas escaping is detectable in principle. For both TOI-431 b and d, we select similar planets from the New Generation Planetary Population Synthesis (NGPPS) data. Then show that considering the mass-loss rates, TOI-431 b should be a naked solid planet, and TOI-431 d will likely maintain its gas envelope until the host star dies. According to the formation and evolution tracks, we find that TOI-431 b's potential birthplace (0.1-2 AU) should be inner than TOI-431 d (2-12 AU). Our results are consistent with the interpretation of the radius valley being caused by atmospheric escape. The intrinsic reason may be their birthplace, which will determine how close they can migrate to the host star, then lose mass and result in the Fulton gap.
description: 16 pages, 14 figures, 4 tabels. Published by ApJ
MOESM1 of Analysis of dynamic molecular networks for pancreatic ductal adenocarcinoma progression
Creators: name: Pan, Zongfu
name: Li, Lu
name: Fang, Qilu
name: Zhang, Yiwen
name: Hu, Xiaoping
name: Qian, Yangyang
name: Huang, Ping
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Chemical Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Cancer

description: Additional file 1: Figures S1â S5. Featured clusters at different PDAC stages.
MOESM2 of Mining and genomic characterization of resistance to tan spot, Stagonospora nodorum blotch (SNB), and Fusarium head blight in Watkins core collection of wheat landraces
Creators: name: Jyotirmoy Halder
name: Jinfeng Zhang
name: Shaukat Ali
name: Jagdeep Sidhu
name: Harsimardeep Gill
name: Talukder, Shyamal
name: Kleinjan, Jonathan
name: Turnipseed, Brent
name: Sunish Sehgal
Publisher: name: figshare
Year: 2019
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Biotechnology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology

description: Additional file 2: Figure S1. Geographical distribution of Watkins landrace cultivars (LCs) and their response to A) tan spot Ptr race 1; B) tan spot Ptr race 5; C) SNB; and D) FHB. Red and blue spots represent resistant and susceptible LCs respectively. The figure was created using the open-source application QGIS (Version 3.8.3) and an open-source map (OpenStreetMap plugin). Figure S2. Principal Components Analysis (PCA) of 118 Watkins LCs of wheat. In the PCA plot, the small colored dots representing the LCs and they were colored according to three different populations (P1: Population 1, P2: Population 2, and P3: Population 3) identified by (Winfield et al. 2018) using all 804 Watkins LCs and 35â€‰K SNPs.
Entanglement Hamiltonian of Many-body Dynamics in Strongly-correlated Systems
Creators: name: Zhu, W.
name: Huang, Zhoushen
name: He, Yin-Chen
name: Wen, Xueda
Publisher: name: arXiv
Year: 2019
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: A powerful perspective in understanding non-equilibrium quantum dynamics is through the time evolution of its entanglement content. Yet apart from a few guiding principles for the entanglement entropy, to date, not much else is known about the refined characters of entanglement propagation. Here, we unveil signatures of the entanglement evolving and information propagation out-of-equilibrium, from the view of entanglement Hamiltonian. As a prototypical example, we study quantum quench dynamics of a one-dimensional Bose-Hubbard model by means of time-dependent density-matrix renormalization group simulation. Before reaching equilibration, it is found that a current operator emerges in entanglement Hamiltonian, implying that entanglement spreading is carried by particle flow. In the long-time limit subsystem enters a steady phase, evidenced by the dynamic convergence of the entanglement Hamiltonian to the expectation of a thermal ensemble. Importantly, entanglement temperature of steady state is spatially independent, which provides an intuitive trait of equilibrium. We demonstrate that these features are consistent with predictions from conformal field theory. These findings not only provide crucial information on how equilibrium statistical mechanics emerges in many-body dynamics, but also add a tool to exploring quantum dynamics from perspective of entanglement Hamiltonian.
description: 12 pages, 9 figures; comments are welcome
Thermodynamic properties of ferromagnetic/superconductor/ferromagnetic nanostructures
Creators: name: Baladie, I.
name: Buzdin, A.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: The theoretical description of the thermodynamic properties of ferromagnetic/superconductor/ferromagnetic (F/S/F) systems of nanoscopic scale is proposed. Their superconducting characteristics strongly depend on the mutual orientation of the ferromagnetic layers. In addition, depending on the transparency of S/F interfaces, the superconducting critical temperature can exhibit four different types of dependences on the thickness of the F-layer. The obtained results permit to give some practical recommendations for the spin-valve effect experimental observation. In this spin-valve sandwich, we also expect a spontaneous transition from parallel to anti-parallel ferromagnetic moment orientation, due to the gain in the superconducting condensation energy.
description: 20 pages, 5 figures, submitted to PRB
K-quantum Nonlinear Jaynes-Cummings Model in Two Trapped Ions
Creators: name: Zeng, Hao-Sheng
Publisher: name: arXiv
Year: 2001
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: A k-quantum nonlinear Jaynes-Cummings model for two trapped ions interacting with laser beams resonant to k-th red side-band of center-of-mass mode, far from Lamb-Dicke regime, has been obtained. The exact analytic solution showed the existence of quantum collapses and revivals of the occupation of two atoms.
description: 8 pages, 3 figures
Six-dimensional Myers-Perry rotating black hole cannot be overspun
Creators: name: Shaymatov, Sanjar
name: Dadhich, Naresh
name: Ahmedov, Bobomurat
Publisher: name: arXiv
Year: 2019
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Though under nonlinear accretion, all black holes in four and higher dimensions obey the weak cosmic censorship conjecture (CCC); however, they generally violate it for linear test particle accretion with the exception of five-dimensional rotating black hole with a single rotation. In dimensions greater than five, there exists no extremal condition for black hole with single rotation and hence it can never be overspun. However, the extremal condition does exist for five-dimensional black hole with two rotations and then it could indeed be overspun under linear accretion. In this paper, we study the case of six-dimensional rotating black hole with two rotations and show that unlike the five-dimensional black hole it cannot be overspun under linear accretion. Though for nonlinear accretion, this result is anyway expected to hold good, yet we have verified it with an explicit calculation. Further, we would like to conjecture that so should be the case in all dimensions greater than six. Thus, the weak CCC may always be obeyed even at linear accretion process for rotating black hole in all dimensions greater than five.
description: 10 pages, no figures, 1 Table
Paradexamine micronesicus Ledoyer 1979
Creators: name: Myers, Alan A.
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Amphipoda
Dexaminidae
Paradexamine
Paradexamine micronesicus

description: Paradexamine micronesicus Ledoyer, 1979
(Figs 15, 16)
 Paradexamine micronesicus Ledoyer, 1979: 56, fig. 30 (II). — Ledoyer, 1983: 374, fig. 140.
 Dexaminoides orientalis. —J.L. Barnard, 1965: 523, fig. 25.
 Material examined. 1 female, AM P78003 (QLD 1621); 1 male, AM P70749 (QLD 1647); 1 juvenile, AM P70793 (QLD 1649); 2 females, AM P78005 (SEL /LZI-1-1).
 Type Locality. Toliara (Tulear), Madagascar (~ 23°25'S 43°42'E).
 Description. Based on female, 2.8 mm, AM P70637.
 Head. Head lateral lobes acute. Eye large, about half or less length of head, with black central core. Antenna 1 peduncle article 1 with posterodistal acute spine. Antenna 2 length unknown; peduncle article 4 slender, parallel sided, weakly setulose; flagellum unknown. Maxilliped palp 4-articulate.
 Pereon. Gnathopod 1 carpus longer than propodus; propodus not greatly expanded distally. Gnathopod 2 carpus elongate, slender, much longer than propodus. Pereopods 3–7 simple or scarcely prehensile. Pereopod 3 coxa, posterodistal corner with single spine; dactylus much less than half length of propodus. Pereopods 5– 7 of uniform morphology. Pereopod 5 basis subrectangular, with posterodistal lobe, anterior margin without robust setae. Pereopod 6 basis pyriform, broadest proximally, posteroproximal margin convex, serrated, posterodistal margin straight, smooth. Pereopod 7 coxal gill present; basis moderately expanded, longer than broad, posterodistal margin serrated.
 Pleon. Segments with the following dorsal spine arrangement (from urosomite 1 forwards): 1.3.3.1.0. Epimeron 2 posteroventral corner produced into a small spine. Epimeron 3 posterior and ventral margins smooth, with a single strong posteroventral spine. Urosome with urosomites 2–3 fused. Urosomite 1 with dorsal spine only. Uropod 3 rami lacking long fine setae. Telson lobes distally serrated, each lobe with multiple serrations of uneven size and shape, without distal spine, without subdistal robust seta, without subdistal slender seta.
 Male (sexually dimorphic characters). Based on male, 2.8 mm, AM P70749. Eye huge, more than half length of head. Antenna 2 peduncle article 4 broader proximally, finely setulose. Uropod 3 rami with many long fine setae.
 Habitat. Sandy bottoms with mounds of Udotea and coral rubble.
 Remarks. Present material agrees well with the original description (Ledoyer 1979).
 Distribution. Australia. Queensland: Lizard Island (current study). Madagascar. Toliara (Tulear) (Ledoyer 1979). Micronesia. Ifaluk Atoll (Barnard 1965).
description: Published as part of Myers, Alan A., 2009, Dexaminidae *, pp. 393-424 in Zootaxa 2260 (1) on pages 413-414, DOI: 10.11646/zootaxa.2260.1.20, http://zenodo.org/record/5319784
Mesons in (2+1) Dimensional Light Front QCD. II. Similarity Renormalization Approach
Creators: name: Chakrabarti, Dipankar
name: Harindranath, A.
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Recently we have studied the Bloch effective Hamiltonian approach to bound states in 2+1 dimensional gauge theories. Numerical calculations were carried out to investigate the vanishing energy denominator problem. In this work we study similarity renormalization approach to the same problem. By performing analytical calculations with a step function form for the similarity factor, we show that in addition to curing the vanishing energy denominator problem, similarity approach generates linear confining interaction for large transverse separations. However, for large longitudinal separations, the generated interaction grows only as the square root of the longitudinal separation and hence produces violations of rotational symmetry in the spectrum. We carry out numerical studies in the Głazek-Wilson and Wegner formalisms and present low lying eigenvalues and wavefunctions. We investigate the sensitivity of the spectra to various parameterizations of the similarity factor and other parameters of the effective Hamiltonian, especially the scale $σ$. Our results illustrate the need for higher order calculations of the effective Hamiltonian in the similarity renormalization scheme.
description: 31 pages, 4 figures, to be published in Physical Review D
MOESM4 of Merits, features, and desiderata to be considered when developing electronic health records with embedded clinical decision support systems in Palestinian hospitals: a consensus study
Creators: name: Shawahna, Ramzi
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology

description: Additional file 4: Tables S1-S9. show multiple comparisons of importance weights items in each category.
Tardif, Ernest-Joseph, Coutumiers de Normandie, Rouen, A. Lestringant, Paris, A. Picard et fils, tome 1, 2ème partie, 1903
Creators: name: Tardif, Ernest-Joseph
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2019

description: Source: https://gallica.bnf.fr/ark:/12148/bpt6k5502865x/f5.item.zoom
description: Relation: vignette : https://www.nakala.fr/data/11280/195ad910
On the signed Selmer groups of congruent elliptic curves with semistable reduction at all primes above $p$
Creators: name: Ahmed, Suman
name: Lim, Meng Fai
Publisher: name: arXiv
Year: 2019
Subjects: subject: Number Theory (math.NT)
subject: FOS: Mathematics

description: Let $p$ be an odd prime. We attach appropriate signed Selmer groups to an elliptic curve $E$, where $E$ is assumed to have semistable reduction at all primes above $p$. We then compare the Iwasawa $λ$-invariants of these signed Selmer groups for two congruent elliptic curves over the cyclotomic $\mathbb{Z}_p$-extension in the spirit of Greenberg-Vatsal and B. D. Kim. As an application of our comparsion formula, we show that if the $p$-parity conjecture is true for one of the congruent elliptic curves, then it is also true for the other elliptic curve. In the midst of proving this latter result, we also generalize an observation of Hatley on the parity of the signed Selmer groups.
description: Revise the introduction. Added a new subsection 3.1 and some new references. Fix a gap in the proof of Proposition 3.4.1
MOESM3 of Merits, features, and desiderata to be considered when developing electronic health records with embedded clinical decision support systems in Palestinian hospitals: a consensus study
Creators: name: Shawahna, Ramzi
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology

description: Additional file 3. Adherence to Conducting and REporting of DElphi Studies (CREDES) guidelines.
Characterisation of a novel leukocyte receptor complex-encoded receptor TARM1
Creators: name: Radjabova, Valeria
Publisher: name: Apollo - University of Cambridge Repository
Year: 2018
Subjects: LRC
TARM1
neutrophils

description: Cellular immune responses are orchestrated by an intricate balance of activating and inhibitory signals transmitted by cell surface receptors. Perturbations in this balance by overamplified or dysregulated signalling underlie many severe immunopathologies such as sepsis and cancer. In this work I describe the identification and characterisation of a novel, evolutionarily conserved immunoreceptor encoded within the human leukocyte receptor complex and syntenic region of mouse chromosome 7, named T cell–interacting, activating receptor on myeloid cells-1 (TARM1). The transmembrane region of TARM1 contained a conserved arginine residue, consistent with association with a signalling adaptor. Co-immunoprecipitation experiments confirmed that TARM1 associated with the ITAM adaptor FcR-gamma but not with DAP10 or DAP12. Flow cytometric screening of cells and tissues from pathogen-free mice showed that the TARM1 protein was constitutively expressed on the cell surface of mature and immature CD11b+Gr+ neutrophils isolated from bone marrow but not at peripheral sites. Following ip LPS treatment or systemic bacterial challenge, TARM1 protein expression was upregulated by myelocytes, mature neutrophils and inflammatory monocytes and TARM1+ cells were rapidly recruited to sites of inflammation. TARM1 expression was also upregulated by bone marrow–derived macrophages and dendritic cells following stimulation with TLR agonists in vitro. Ligation of the TARM1 receptor with specific antibody in the presence of TLR ligands, such as LPS, enhanced the secretion of proinflammatory cytokines by bone marrow–derived macrophages and primary mouse neutrophils, whereas TARM1 stimulation alone had no effect. Finally, an immobilised TARM1 Fc fusion protein suppressed CD4+ T cell activation and proliferation in vitro. These results suggest that a putative T cell ligand can interact with TARM1 receptor, resulting in bidirectional signalling and raising the T cell activation threshold while costimulating the release of proinflammatory cytokines by macrophages and neutrophils.
Long-Range Prethermal Phases of Nonequilibrium Matter
Creators: name: Machado, Francisco
name: Else, Dominic V.
name: Kahanamoku-Meyer, Gregory D.
name: Nayak, Chetan
name: Yao, Norman Y.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Quantum Gases (cond-mat.quant-gas)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We prove the existence of non-equilibrium phases of matter in the prethermal regime of periodically-driven, long-range interacting systems, with power-law exponent $α> d$, where $d$ is the dimensionality of the system. In this context, we predict the existence of a disorder-free, prethermal discrete time crystal in one dimension -- a phase strictly forbidden in the absence of long-range interactions. Finally, using a combination of analytic and numerical methods, we highlight key experimentally observable differences between such a prethermal time crystal and its many-body localized counterpart.
description: 18 pages + 12 pages appendices. v2 published version (with new title)