cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
The Detection of Wind Variability in Magellanic Cloud O Stars
Creators: name: Massa, D.
name: Fullerton, A. W.
name: Hutchings, J. B.
name: Morton, D. C.
name: Sonneborn, G.
name: Willis, A. J.
name: Bianchi, L.
name: Brownsberger, K. R.
name: Crowther, P. A.
name: Snow, T. P.
name: York, D. G.
Publisher: name: arXiv
Year: 2000
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present Far Ultraviolet Explorer (FUSE) spectra for three Magellanic Cloud O stars (Sk 80, Sk -67 05 and Sk -67 111) with repeated observations. The data demonstrate the capabilities of FUSE to perform time-resolved spectroscopy on extragalactic stars. The wavelength coverage of FUSE provides access to resonance lines due to less abundant species, such as sulfur, which are unsaturated in O supergiants. This allows us to examine wind variability at all velocities in resonance lines for stars with higher mass loss rates than can be studied at longer (lambda > 1150 A) wavelengths. The FUSE wavelength range also includes resonance lines from ions which bracket the expected dominant ionization stage of the wind. Our observations span 1-4 months with several densely sampled intervals of 10 hours or more. These observations reveal wind variability in all of the program stars and distinctive differences in the ionization structure and time scales of the variability. Sk -67 111 demonstrates significant wind variability on a time scale less than 10 hours and the coolest O star (Sk -67 05) exhibits the largest variations in O VI.
description: 3 pages of text and 3 JPG figures. To be included in the FUSE ApJ Letters special issue
Additional file 14 of The landscape of lncRNAs in Cydia pomonella provides insights into their signatures and potential roles in transcriptional regulation
Creators: name: Xing, Longsheng
name: Xi, Yu
name: Qiao, Xi
name: Huang, Cong
name: Wu, Qiang
name: Yang, Nianwan
name: Guo, Jianyang
name: Liu, Wanxue
name: Fan, Wei
name: Wan, Fanghao
name: Qian, Wanqiang
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 14: Figure S8. Distribution pattern of the JS specificity scores of tissue-specific genes in different tissues.
Additional file 1 of Genetic variation of ABCB1 (rs1128503, rs1045642) and CYP2E1 rs3813867 with the duration of tuberculosis therapy: a pilot study among tuberculosis patients in Indonesia
Creators: name: Barliana, Melisa Intan
name: Kusuma, Arif Satria Wira
name: Insani, Widya Norma
name: Alfian, Sofa Dewi
name: Diantini, Ajeng
name: Mutakin, Mutakin
name: Rostinawati, Tina
name: Herlambang, Herlambang
name: Puspitasari, Irma Melyani
name: Suwantika, Auliya Abdurrohim
name: Abdulah, Rizky
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1: Table S1. Primers for SNP genotyping [18, 33].
Stabilization and state trajectory tracking problem for nonlinear control systems in the presence of disturbances
Creators: name: Vrabel, Robert
Publisher: name: arXiv
Year: 2017
Subjects: subject: Optimization and Control (math.OC)
subject: FOS: Mathematics
subject: 93C10 (Primary), 93D15 (Secondary)

description: In this paper we consider the problem of stabilization and tracking of desired state trajectory for a wide range of nonlinear control problems with disturbances. We present the sufficient conditions for the existence of $C^k$ state feedback controllers and the process of their mathematical designing is described.
description: 12 pages; This is an Author's Original Manuscript (AOM) of an article published by Taylor & Francis in International Journal of Control on 14 August 2017, available online: http://www.tandfonline.com/10.1080/00207179.2017.1361044
Stabilized finite element schemes for incompressible flow using Scott--Vogelius elements
Creators: name: Burman, Erik
name: Linke, Alexander
Publisher: name: Weierstrass Institute
Year: 2006
Subjects: subject: mixed finite elements
subject: stabilized methods
subject: solenoidal finite elements
subject: edge stabilization
subject: interior penalty
subject: local projection
subject: Oseen's equation
subject: LBB-condition
subject: a-priori estimate
subject: 76M10
subject: 65M12
subject: 65M15

description: We propose a stabilized finite element method based on the Scott-Vogelius element in combination with either a local projection stabilization or an edge oriented stabilization based on a penalization of the gradient jumps over element edges. We prove a discrete inf-sup condition leading to optimal a priori error estimates. The theoretical considerations are illustrated by some numerical examples.
Additional file 2 of Genetic variation of ABCB1 (rs1128503, rs1045642) and CYP2E1 rs3813867 with the duration of tuberculosis therapy: a pilot study among tuberculosis patients in Indonesia
Creators: name: Barliana, Melisa Intan
name: Kusuma, Arif Satria Wira
name: Insani, Widya Norma
name: Alfian, Sofa Dewi
name: Diantini, Ajeng
name: Mutakin, Mutakin
name: Rostinawati, Tina
name: Herlambang, Herlambang
name: Puspitasari, Irma Melyani
name: Suwantika, Auliya Abdurrohim
name: Abdulah, Rizky
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 2: Figure S1. Gender of TB patients.
Dynamic heterogeneity and non-Gaussian behavior in a model supercooled liquid
Creators: name: Shell, M. Scott
name: Debenedetti, Pablo G.
name: Stillinger, Frank H.
Publisher: name: arXiv
Year: 2005
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: We use a recently-derived reformulation of the diffusion constant [Stillinger F H and Debenedetti P G 2005 J. Phys. Chem. B 109 6604] to investigate heterogeneous dynamics and non-Gaussian diffusion in a binary Lennard-Jones mixture. Our work focuses on the joint probability distribution of particles with velocity v_0 at time t=0 and eventual displacement Delta x at time t=Delta t. We show that this distribution attains a distinctive shape at the time of maximum non-Gaussian behavior in the supercooled liquid. By performing a two-Gaussian fit of the displacement data, we obtain, in a non-arbitrary manner, two diffusive length scales inherent to the supercooled liquid and use them to identify spatially separated regions of mobile and immobile particles.
description: 15 pages, 5 figures
Standard and Non-standard Extensions of Lie algebras
Creators: name: Forte, L. A.
name: Sciarrino, A.
Publisher: name: arXiv
Year: 2005
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We study the problem of quadruple extensions of simple Lie algebras. We find that, adding a new simple root $α_{+4}$, it is not possible to have an extended Kac-Moody algebra described by a Dynkin-Kac diagram with simple links and no loops between the dots, while it is possible if $α_{+4}$ is a Borcherds imaginary simple root. We also comment on the root lattices of these new algebras. The folding procedure is applied to the simply-laced triple extended Lie algebras, obtaining all the non-simply laced ones. Non- standard extension procedures for a class of Lie algebras are proposed. It is shown that the 2-extensions of $E_{8}$, with a dot simply linked to the Dynkin-Kac diagram of $E_{9}$, are rank 10 subalgebras of $E_{10}$. Finally the simple root systems of a set of rank 11 subalgebras of $E_{11}$, containing as sub-algebra $E_{10}$, are explicitly written.
description: Revised version. Inaccurate statements corrected. Expanded version with added references
title: ADCO, Ordre cistercien et abbaye de Cîteaux : comptes pour l'ordre (1337-1347), comptes du boursier (1377-1402) (11 H 1160), f. 00152
Creators: name: de la Côte-d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CBMA/CG21/F.PETOT/2017
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: comptes

description: Ordre cistercien et abbaye de Cîteaux : comptes pour l'ordre (1337-1347), comptes du boursier (1377-1402), Archives départementales de la Côte-d'Or, (11 H 1160). Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Ordre cistercien et abbaye de Cîteaux : comptes pour l'ordre (1337-1347), comptes du boursier (1377-1402), Archives départementales de la Côte-d'Or, (11 H 1160), f. 00152, in Projet CBMA - Corpus Burgundiae Medii Aevi \[Ressource en ligne\], https:// manuscrits.cbma-project.eu/
description: Provenance: http://www.wikidata.org/entity/Q843261
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
description: Provenance: abbaye de Cîteaux
Boson-fermion mapping and dynamical supersymmetry in fermion models
Creators: name: Navratil, P
name: Geyer, H B
name: Dobaczewski, J
Publisher: name: arXiv
Year: 1996
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We show that a dynamical supersymmetry can appear in a purely fermionic system. This ``supersymmetry without bosons" is constructed by application of a recently introduced boson-fermion Dyson mapping from a fermion space to a space comprised of collective bosons and ideal fermions. In some algebraic fermion models of nuclear structure, particular Hamiltonians may lead to collective spectra of even and odd nuclei that can be unified using the dynamical supersymmetry concept with Pauli correlations exactly taken into account.
description: 20 pages. Revtex. One PostScript figure available on request from PN
Exact Results for Three-Body Correlations in a Degenerate One-Dimensional Bose Gas
Creators: name: Cheianov, Vadim V.
name: Smith, H.
name: Zvonarev, M. B.
Publisher: name: arXiv
Year: 2005
Subjects: subject: Other Condensed Matter (cond-mat.other)
subject: FOS: Physical sciences

description: Motivated by recent experiments we derive an exact expression for the correlation function entering the three-body recombination rate for a one-dimensional gas of interacting bosons. The answer, given in terms of two thermodynamic parameters of the Lieb-Liniger model, is valid for all values of the dimensionless coupling $γ$ and contains the previously known results for the Bogoliubov and Tonks-Girardeau regimes as limiting cases. We also investigate finite-size effects by calculating the correlation function for small systems of 3, 4, 5 and 6 particles.
description: 4 pages, 2 figures
Turbulence and the Hong-Ou-Mandel effect
Creators: name: Prabhakar, Shashi
name: Mabena, Chemist
name: Konrad, Thomas
name: Roux, Filippus S.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Physics (quant-ph)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: The effect of a decoherence channel, such as a turbulent atmosphere, on the second order quantum interference in the Hong-Ou-Mandel (HOM) effect is investigated. The investigation includes both theoretical analyses and an experimental implementation of the process. In our experiment, entangled input states are prepared with spontaneous parametric down-conversion. The atmospheric turbulence is modelled as a single-phase screen and simulated with a spatial light modulator according to the theory of Kolmogorov. We find both theoretically and experimentally that the HOM dip is unaffected when only one of the photons passes through turbulence, but both photons pass through turbulence, the HOM interference is only slightly affected by the scintillation. The reasons behind these findings and their consequences for HOM-based teleportation are discussed.
description: 8 pages, 4 figures
An Exploration of the Paradigm for the 2-3 Hour Period Gap in Cataclysmic Variables
Creators: name: Howell, Steve B.
name: Nelson, Lorne A.
name: Rappaport, Saul
Publisher: name: arXiv
Year: 2000
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We critically examine the basic paradigm for the origin of the 2-3 hr period gap in cataclysmic variables (CVs). We carry out an extensive population synthesis study of CVs starting from ~ 3 x 10^6 primordial binaries, and evolving some ~ 2 x 10^4 surviving systems through their CV phase. In particular we study current-epoch distributions of CVs in the $\dot M-P_{orb}$, R_{2}-P_{orb}, M_{2}-P_{orb}, q-P_{orb}, T_{eff}-P_{orb}, and L_{2}-P_{orb} planes, where $\dot M$ is the mass transfer rate, q is the mass ratio M_2/M_1, and M_2, R_2, T_{eff}, and L_2 are the donor star mass, radius, effective temperature, and luminosity, respectively. This work presents a new perspective on theoretical studies of the long-term evolution of CVs. In particular, we show that if the current paradigm is correct, the secondary masses in CVs just above the period gap should be as much as ~ 50% lower than would be inferred if one assumes a main-sequence radius-mass relation for the donor star.
description: Accepted in ApJ
Additional file 3 of Genetic variation of ABCB1 (rs1128503, rs1045642) and CYP2E1 rs3813867 with the duration of tuberculosis therapy: a pilot study among tuberculosis patients in Indonesia
Creators: name: Barliana, Melisa Intan
name: Kusuma, Arif Satria Wira
name: Insani, Widya Norma
name: Alfian, Sofa Dewi
name: Diantini, Ajeng
name: Mutakin, Mutakin
name: Rostinawati, Tina
name: Herlambang, Herlambang
name: Puspitasari, Irma Melyani
name: Suwantika, Auliya Abdurrohim
name: Abdulah, Rizky
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 3: Figure S2. Age range of TB patients.
The Speech Recognition Virtual Kitchen
Creators: name: Metze, Florian
name: Fosler-Lussier, Eric
name: Bates, Rebecca
Publisher: name: Carnegie Mellon University
Year: 2013
Subjects: subject: 89999 Information and Computing Sciences not elsewhere classified
subject: FOS: Computer and information sciences

description: This paper describes the "Speech Recognition Virtual Kitchen" environment which has the goals to promote community sharing of research techniques, foster innovative experimentation, and provide solid reference systems as a tool for education, research, and evaluation with a focus on, but not restricted to, speech and language research. The core of the research infrastructure is the use of Virtual Machines (VMs) that provide a consistent environment for experimentation. We liken the virtual machines to a "kitchen" because they provide the infrastructure into which one can install "appliances" (e.g., speech recognition tool-kits), "recipes" (scripts for creating state-of-the art systems), and "ingredients" (language data). A web-based community platform complements the VMs, to allow physically disconnected users to jointly explore VMs, learn from each other, and collaborate in research. In this demo, we present initial VMs that were mostly used for teaching classes at Carnegie Mellon and Ohio State University, and solicit feedback for an initial "hub"-style web-site.
Real-time quantum state estimation in circuit QED via Bayesian approach
Creators: name: Yang, Yang
name: Gong, Beili
name: Cui, Wei
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Using a circuit QED device, we present a theoretical study of real-time quantum state estimation via quantum Bayesian approach. Suitable conditions under which the Bayesian approach can accurately update the density matrix of the qubit are analyzed. We also consider the correlation between some basic and physically meaningful parameters of the circuit QED and the performance of the Bayesian approach. Our results advance the understanding of quantum Bayesian approach and pave the way to study quantum feedback control and adaptive control.
Gauging the Wess-Zumino term of a sigma model with boundary
Creators: name: Figueroa-O'Farrill, José
name: Mohammedi, Noureddine
Publisher: name: arXiv
Year: 2005
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Differential Geometry (math.DG)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: We investigate the gauging of the Wess-Zumino term of a sigma model with boundary. We derive a set of obstructions to gauging and we interpret them as the conditions for the Wess-Zumino term to extend to a closed form in a suitable equivariant relative de Rham complex. We illustrate this with the two-dimensional sigma model and we show that the new obstructions due to the boundary can be interpreted in terms of Courant algebroids. We specialise to the case of the Wess-Zumino-Witten model, where it is proved that there always exist suitable boundary conditions which allow gauging any subgroup which can be gauged in the absence of a boundary. We illustrate this with two natural classes of gaugings: (twisted) diagonal subgroups with boundary conditions given by (twisted) conjugacy classes, and chiral isotropic subgroups with boundary conditions given by cosets.
description: 18 pages (minor changes in response to referee report)
Responsible data stewardship needs data metrics
Creators: name: Puebla, Iratxe
Publisher: name: Zenodo
Year: 2024
Subjects: data metrics
open data
research assessment
infrastructure

description: The adoption of open data practices has resulted in a wealth of open datasets, but we lack a clear picture of how data is used, by whom and for what purposes. Responsible data stewardship extends beyond access and must include evaluations of data usage. Challenges in the development of data metrics have complicated and stalled our ability to evaluate the reuse of open data. However, by adopting best practices and supporting infrastructure to make data citation information available at scale to the community, we can pave the way to enable evaluation and reward for open data usage. This talk will address key pieces in the data usage puzzle, discuss solutions and infrastructure developed to address gaps and challenges, and emphasize a call to action for the prioritization of data metrics.
Additional file 1: of Estimation of disability weight for paragonimiasis: a systematic analysis
Creators: name: Feng, Yun
name: FĂźrst, Thomas
name: Liu, Lu
name: Yang, Guo-Jing
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Marine Biology

description: Multilingual abstracts in the five official working languages of the United Nations. (PDF 225 kb)
Regularization, Renormalization and Range: The Nucleon-Nucleon Interaction from Effective Field Theory
Creators: name: Cohen, Thomas D.
Publisher: name: arXiv
Year: 1996
Subjects: subject: Nuclear Theory (nucl-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Regularization and renormalization is discussed in the context of low-energy effective field theory treatments of two or more heavy particles (such as nucleons). It is desirable to regulate the contact interactions from the outset by treating them as having a finite range. The low energy physical observables should be insensitive to this range provided that the range is of a similar or greater scale than that of the interaction. Alternative schemes, such as dimensional regularization, lead to paradoxical conclusions such as the impossibility of repulsive interactions for truly low energy effective theories where all of the exchange particles are integrated out. This difficulty arises because a nonrelativistic field theory with repulsive contact interactions is trivial in the sense that the $S$ matrix is unity and the renormalized coupling constant zero. Possible consequences of low energy attraction are also discussed. It is argued that in the case of large or small scattering lengths, the region of validity of effective field theory expansion is much larger if the contact interactions are given a finite range from the beginning.
description: 7 pages
Managing Research data in YoDa
Creators: name: Vincent Brunst
name: Maisam M. Dadkan
Publisher: name: Zenodo
Year: 2024
Subjects: yoda
RDM
Research data management
irods
Utrecht university

description: Yoda is a research data management service that enables researchers from Utrecht University and their partners to securely deposit, share, publish, and preserve large amounts of research data during all stages of a research project. This service is managed and supported by an interdisciplinary team of university employees. The software has been developed at Utrecht University and is used by multiple organizations, both in the Netherlands and abroad.

Yoda is built on the iRODS data management system which makes it a data management and data repository system simultaneously. iRODS (Integrated Rule-Oriented Data System) is an open-source data management software that provides a flexible and comprehensive solution for organizing, sharing, and preserving large and complex data sets. iRODS is designed to handle data from various sources, including scientific instruments, file systems, databases, and web services. It provides a unified namespace, data indexing, and metadata management, making it easy to locate and access data from multiple locations. iRODS also includes a rules engine that allows users to automate data management tasks and enforce policies, ensuring data integrity and security.

In the new version of this workshop, we cover the following topics (1.5 hour):

Presentation:

The basic concepts and functionalities of Yoda, e.g., getting access, uploading, sharing, and publishing data workflows on Yoda

The best practices for using Yoda

Demo:

Demonstration of different functionalities of Yoda from uploading to publishing data

Hands-on( assignments):

Granting the participants access to Yoda

Designning a dummy folder strucuture on Yoda

Fill in the metadata form

Sharing the uploaded data with other peers
Mining the Kilo-Degree Survey for solar system objects
Creators: name: Mahlke, M.
name: Bouy, H.
name: Altieri, B.
name: Kleijn, G. Verdoes
name: Carry, B.
name: Bertin, E.
name: de Jong, J. T. A.
name: Kuijken, K.
name: McFarland, J.
name: Valentijn, E.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: The search for minor bodies in the solar system promises insights into its formation history. Wide imaging surveys offer the opportunity to serendipitously discover and identify these traces of planetary formation and evolution. We aim to present a method to acquire position, photometry, and proper motion measurements of solar system objects in surveys using dithered image sequences. The application of this method on the Kilo-Degree Survey is demonstrated. Optical images of 346 square degree fields of the sky are searched in up to four filters using the AstrOmatic software suite to reduce the pixel to catalog data. The solar system objects within the acquired sources are selected based on a set of criteria depending on their number of observation, motion, and size. The Virtual Observatory SkyBoT tool is used to identify known objects. We observed 20,221 SSO candidates, with an estimated false-positive content of less than 0.05%. Of these SSO candidates, 53.4% are identified by SkyBoT. KiDS can detect previously unknown SSOs because of its depth and coverage at high ecliptic latitude, including parts of the Southern Hemisphere. Thus we expect the large fraction of the 46.6% of unidentified objects to be truly new SSOs. Our method is applicable to a variety of dithered surveys such as DES, LSST, and Euclid. It offers a quick and easy-to-implement search for solar system objects. SkyBoT can then be used to estimate the completeness of the recovered sample.
description: Final version to be published in A&A. Supplementary data will be published at CDS. 11 pages, 15 figures
Additional file 4 of Genetic variation of ABCB1 (rs1128503, rs1045642) and CYP2E1 rs3813867 with the duration of tuberculosis therapy: a pilot study among tuberculosis patients in Indonesia
Creators: name: Barliana, Melisa Intan
name: Kusuma, Arif Satria Wira
name: Insani, Widya Norma
name: Alfian, Sofa Dewi
name: Diantini, Ajeng
name: Mutakin, Mutakin
name: Rostinawati, Tina
name: Herlambang, Herlambang
name: Puspitasari, Irma Melyani
name: Suwantika, Auliya Abdurrohim
name: Abdulah, Rizky
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 4: Figure S3. Genotype distribution of a) ABCB1 rs1128503, b) ABCB1 rs1045642, and c) CYP2E1 rs3813867.
The Sample Complexity of Self-Verifying Bayesian Active Learning
Creators: name: Yang, Liu
name: Hanneke, Steve
name: Carbonell, Jaime G.
Publisher: name: Carnegie Mellon University
Year: 2011
Subjects: subject: 89999 Information and Computing Sciences not elsewhere classified
subject: FOS: Computer and information sciences

description: We prove that access to a prior distribution over target functions can dramatically improve the sample complexity of self-terminating active learning algorithms, so that it is always better than the known results for prior-dependent passive learning. In particular, this is in stark contrast to the analysis of prior-independent algorithms, where there are simple known learning problems for which no self-terminating algorithm can provide this guarantee for all priors
Additional file 15 of The landscape of lncRNAs in Cydia pomonella provides insights into their signatures and potential roles in transcriptional regulation
Creators: name: Xing, Longsheng
name: Xi, Yu
name: Qiao, Xi
name: Huang, Cong
name: Wu, Qiang
name: Yang, Nianwan
name: Guo, Jianyang
name: Liu, Wanxue
name: Fan, Wei
name: Wan, Fanghao
name: Qian, Wanqiang
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 15: Figure S9. Distribution of PCCs for neighboring GPs. (A) Boxplot presentation of the distribution of PCCs for the entire set of neighboring gene pairs. (B) Boxplot showing the distribution of PCCs for non-overlapping gene pairs. (C) Boxplot representing the distribution of PCCs for overlapping gene pairs.
Near Mean-motion Resonances in the Systems Observed by Kepler: Affected by Mass Accretion and Type I Migration
Creators: name: Wang, Su
name: Ji, Jianghui
Publisher: name: arXiv
Year: 2017
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: The Kepler mission has released over 4496 planetary candidates, among which 3483 planets have been confirmed as of April 2017. The statistical results of the planets show that there are two peaks around 1.5 and 2.0 in the distribution of orbital period ratios. The observations indicate that a plenty of planet pairs could have firstly been captured into mean motion resonances (MMRs) in planetary formation. Subsequently, these planets depart from exact resonant locations to be near MMRs configurations. Through type I migration, two low-mass planets have a tendency to be trapped into first-order MMRs (2:1 or 3:2 MMRs), however two scenarios of mass accretion of planets and potential outward migration play an important role in reshaping their final orbital configurations. Under the scenario of mass accretion, the planet pairs can cross 2:1 MMRs and then enter into 3:2 MMRs, especially for the inner pairs. With such formation scenario, the possibility that two planets are locked into 3:2 MMRs can increase if they are formed in a flat disk. Moreover, the outward migration can make planets have a high likelihood to be trapped into 3:2 MMRs. We perform additional runs to investigate the mass relationship for those planets in three-planet systems, and we show that two peaks near 1.5 and 2.0 for the period ratios of two planets can be easily reproduced through our formation scenario. We further show that the systems in chain resonances (e.g., 4:2:1, 3:2:1, 6:3:2 and 9:6:4 MMRs), have been observed in our simulations. This mechanism can be applicable to understand the formation of systems of Kepler-48, Kepler-53, Kepler-100, Kepler-192, Kepler-297, Kepler-399, and Kepler-450.
description: 12 pages, 6 figures, accepted for publication in AJ
The Machine Translation Toolpack for LoonyBin: Automated Management of Experimental Machine Translation HyperWorkflows
Creators: name: Clark, Jonathan H.
name: Weese, Jonathan
name: Ahn, Byung Gyu
name: Zollmann, Andreas
name: Gao, Qin
name: Heafield, Kenneth
name: Lavie, Alon
Publisher: name: Carnegie Mellon University
Year: 2010
Subjects: subject: 89999 Information and Computing Sciences not elsewhere classified
subject: FOS: Computer and information sciences

description: Construction of machine translation systems has evolved into a multi-stage workflow involving many complicated dependencies. Many decoder distributions have addressed this by including monolithic training scripts - train-factored-model.pl for Moses and mr_runmer.pl for SAMT. However, such scripts can be tricky to modify for novel experiments and typically have limited support for the variety of job schedulers found on academic and commercial computer clusters. Further complicating these systems are hyperparameters, which often cannot be directly optimized by conventional methods requiring users to determine which combination of values is best via trial and error. The recently-released LoonyBin open-source workflow management tool addresses these issues by providing: 1) a visual interface for the user to create and modify workflows; 2) a well-defined logging mechanism; 3) a script generator that compiles visual workflows into shell scripts, and 4) the concept of Hyperworkflows, which intuitively and succinctly encodes small experimental variations within a larger workflow. In this paper, we describe the Machine Translation Toolpack for LoonyBin, which exposes state-of-the-art machine translation tools as drag-and-drop components within LoonyBin.
Effect of multinary substitution on electronic and transport properties of TiCoSb based half-Heusler alloys
Creators: name: Choudhary, Mukesh K.
name: Ravindran, P.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The electronic structures of TixZrx/2CoPbxTex, TixZrx/2Hfx/2CoPbxTex (x = 0.5), and the parent compound TiCoSb were investigated using the full potential linearized augmented plane wave method. The thermoelectric transport properties of these alloys are calculated on the basis of semi-classical Boltzmann transport theory. From the band structure calculations we show that the substitution of Zr,Hf in the Ti site and Pb and Te in the Sb site lower the band gap value and also change the indirect band (IB) gap of TiCoSb to the direct band (DB) gap. The calculated band gap of TiCoSb, TixZrx/2CoPbxTex, and TixZrx/2Hfx/2CoPbxTex are 1.04 eV (IB), 0.92 eV (DB), and 0.93 eV (DB), respectively. All these alloys follow the empirical rule of 18 valence-electron content which is essential for bringing semiconductivity in half Heusler alloys. It is shown that the substitution of Hf at the Ti site improve the ZT value (~1.05) at room temperature, whereas there is no significant difference in ZT is found at higher temperature. Based on the calculated thermoelectric transport properties, we conclude that the appropriate concentration of Hf substitution can further improve the thermoelectric performance of TixZrx/2Hfx/2CoPbxTex.
Additional file 5 of Genetic variation of ABCB1 (rs1128503, rs1045642) and CYP2E1 rs3813867 with the duration of tuberculosis therapy: a pilot study among tuberculosis patients in Indonesia
Creators: name: Barliana, Melisa Intan
name: Kusuma, Arif Satria Wira
name: Insani, Widya Norma
name: Alfian, Sofa Dewi
name: Diantini, Ajeng
name: Mutakin, Mutakin
name: Rostinawati, Tina
name: Herlambang, Herlambang
name: Puspitasari, Irma Melyani
name: Suwantika, Auliya Abdurrohim
name: Abdulah, Rizky
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 5: Table S2. Hardy–Weinberg Equilibrium for the Genotype of ABCB1 rs1128503.
Additional file 6 of Genetic variation of ABCB1 (rs1128503, rs1045642) and CYP2E1 rs3813867 with the duration of tuberculosis therapy: a pilot study among tuberculosis patients in Indonesia
Creators: name: Barliana, Melisa Intan
name: Kusuma, Arif Satria Wira
name: Insani, Widya Norma
name: Alfian, Sofa Dewi
name: Diantini, Ajeng
name: Mutakin, Mutakin
name: Rostinawati, Tina
name: Herlambang, Herlambang
name: Puspitasari, Irma Melyani
name: Suwantika, Auliya Abdurrohim
name: Abdulah, Rizky
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 6: Table S3. Hardy–Weinberg Equilibrium for the Genotype of ABCB1 rs1045642.
Spin properties of single electron states in coupled quantum dots
Creators: name: Stano, Peter
name: Fabian, Jaroslav
Publisher: name: arXiv
Year: 2005
Subjects: subject: Other Condensed Matter (cond-mat.other)
subject: FOS: Physical sciences

description: Spin properties of single electron states in laterally coupled quantum dots in the presence of a perpendicular magnetic field are studied by exact numerical diagonalization. Dresselhaus (linear and cubic) and Bychkov-Rashba spin-orbit couplings are included in a realistic model of confined dots based on GaAs. Group theoretical classification of quantum states with and without spin orbit coupling is provided. Spin-orbit effects on the g-factor are rather weak. It is shown that the frequency of coherent oscillations (tunneling amplitude) in coupled dots is largely unaffected by spin-orbit effects due to symmetry requirements. The leading contributions to the frequency involves the cubic term of the Dresselhaus coupling. Spin-orbit coupling in the presence of magnetic field leads to a spin-dependent tunneling amplitude, and thus to the possibility of spin to charge conversion, namely spatial separation of spin by coherent oscillations in a uniform magnetic field. It is also shown that spin hot spots exist in coupled GaAs dots already at moderate magnetic fields, and that spin hot spots at zero magnetic field are due to the cubic Dresselhaus term only.
description: 16 pages, 12 figures
JIP HaSPro public data delivery
Creators: name: Deltares
Publisher: name: Zenodo
Year: 2024
Subjects: Scour Protection
Scour
Physical model tests
Factual report
Nature-Inclusive Design
Offshore
Monopiles
Rock berms
Cable crossings
Loose rock
Mattresses
Artificial vegetation

description: This upload contains the public data delivery associated with the Joint Industry Project HaSPro (Handbook of Scour and Cable Protection Methods).  In this upload, the following data is available:

Reports: all factual test reports of the physical model tests, an in-depth analysis report and an ecological framework report.

Physical model test data: bathymetry deformation measurements of scour protection performance tests in the various facilities associated with the reports.

Data viewer: Deltares' experimental data viewer.

Filtered deformation data as used in the derivation of the deformation model

Guiding document
Cloudless atmospheres for young low-gravity substellar objects
Creators: name: Tremblin, P.
name: Chabrier, G.
name: Baraffe, I.
name: Liu, Michael. C.
name: Magnier, E. A.
name: Lagage, P. -O.
name: de Oliveira, C. Alves
name: Burgasser, A. J.
name: Amundsen, D. S.
name: Drummond, B.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: Atmospheric modeling of low-gravity (VL-G) young brown dwarfs remains a challenge. The presence of very thick clouds has been suggested because of their extremely red near-infrared (NIR) spectra, but no cloud models provide a good fit to the data with a radius compatible with evolutionary models for these objects. We show that cloudless atmospheres assuming a temperature gradient reduction caused by fingering convection provides a very good model to match the observed VL-G NIR spectra. The sequence of extremely red colors in the NIR for atmospheres with effective temperature from ~2000 K down to ~1200 K is very well reproduced with predicted radii typical of young low-gravity objects. Future observations with NIRSPEC and MIRI on the James Webb Space Telescope (JWST) will provide more constrains in the mid-infrared, helping to confirm/refute whether or not the NIR reddening is caused by fingering convection. We suggest that the presence/absence of clouds will be directly determined by the silicate absorption features that can be observed with MIRI. JWST will therefore be able to better characterize the atmosphere of these hot young brown dwarfs and their low-gravity exoplanet analogues.
description: Accepted in ApJ
The CMU-Oxford Translation System for the NIST Open Machine Translation 2012 Evaluation
Creators: name: Dyer, Chris
name: Smith, Noah A.
name: Morehead, Graham
name: Blunsom, Phil
name: Levenberg, Abby
Publisher: name: Carnegie Mellon University
Year: 2012
Subjects: subject: 89999 Information and Computing Sciences not elsewhere classified
subject: FOS: Computer and information sciences

description: The core of our system is the hierarchical phrase-based translation model (Chiang, 2007), as implemented by the cdec decoder (Dyer et al., 2010).1 A 4-gram language model estimated using modi- fied Kneser-Ney smoothing was included (Chen and Goodman, 1999). Translation model features include the log relative frequency, log f(e | k), the log counts of k and e, k, the log “lexical translation” probabilities in both directions, indicator features for rule counts of 1. Translation model parameters were tuned using the dynamic programming variant of minimum error rate training for hypergraphs to maximize the bleu score on a held-out development set with a single reference translation (Kumar et al., 2009; Papineni et al., 2002).
Warped Flux Compactification and Brane Gravity
Creators: name: Mukohyama, Shinji
name: Sendouda, Yuuiti
name: Yoshiguchi, Hiroyuki
name: Kinoshita, Shunichiro
Publisher: name: arXiv
Year: 2005
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Astrophysics (astro-ph)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We find a simple exact solution of 6-dimensional braneworld which captures some essential features of warped flux compactification, including a warped geometry, compactification, a magnetic flux, and one or two 3-brane(s). In this setup we analyze how the Hubble expansion rate on each brane changes when the brane tension changes. It is shown that effective Newton's constant resulting from this analysis agrees with that inferred by simply integrating extra dimensions out. Based on the result, a general formula for effective Newton's constant is conjectured and its application to cosmology with type IIB warped string compactification is discussed.
description: 33 pages, LaTeX 2e; Version accepted for publication in JCAP, references added
Serendipitous discovery of an optical emission line jet in NGC\,232
Creators: name: Lopez-Coba, C.
name: Sanchez, S. F.
name: Cruz-Gonzalez, I.
name: Binette, L.
name: Galbany, L.
name: Kruhler, T.
name: Rodrıguez, L. F.
name: Barrera-Ballesteros, J. K.
name: Sanchez-Menguiano, L.
name: Walcher, C. J.
name: Aquino-Ortız, E.
name: Anderson, J. P.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We report the detection of a highly collimated linear emission-line structure in the spiral galaxy NGC\,232 through the use of integral field spectroscopy data from the All-weather MUse Supernova Integral field Nearby Galaxies (AMUSING) survey. This jet--like feature extends radially from the nucleus and is primarily detected in [oiii]$λ$5007 without clear evidence of an optical continuum counterpart. The length of the radial structure projected on sky reaches $\sim 3$ kpc, which makes NGC\,232 the second longest emission-line jet reported. The ionized gas presents extreme [Oiii]/H$β$ and [Nii]/H$α$ line ratios, increasing along the jet-like structure. We discuss three possible scenarios to explain the observed structure: (i) direct ionization of in-falling material from the intergalactic medium by the AGN; (ii) photo-ionization by an un-detected optical counter-part of the radio jet and (iii) fast shocks ionization due to the lateral expansion of the radio jet across the ISM. Our analysis favors in-situ ionization.
description: 7 pages, 2 figures, accepted for publishing in ApJL
Glueballs of Super Yang-Mills from Wrapped Branes
Creators: name: Caceres, Elena
name: Nunez, Carlos
Publisher: name: arXiv
Year: 2005
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: In this paper we study qualitative features of glueballs in N=1 SYM for models of wrapped branes in IIA and IIB backgrounds. The scalar mode, 0++ is found to be a mixture of the dilaton and the internal part of the metric. We carry out the numerical study of the IIB background. The potential found exhibits a mass gap and produces a discrete spectrum without any cut-off. We propose a regularization procedure needed to make these states normalizable.
description: 22 pages plus a appendixes, 2 figures
Additional file 7 of Genetic variation of ABCB1 (rs1128503, rs1045642) and CYP2E1 rs3813867 with the duration of tuberculosis therapy: a pilot study among tuberculosis patients in Indonesia
Creators: name: Barliana, Melisa Intan
name: Kusuma, Arif Satria Wira
name: Insani, Widya Norma
name: Alfian, Sofa Dewi
name: Diantini, Ajeng
name: Mutakin, Mutakin
name: Rostinawati, Tina
name: Herlambang, Herlambang
name: Puspitasari, Irma Melyani
name: Suwantika, Auliya Abdurrohim
name: Abdulah, Rizky
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 7: Table S4. Hardy–Weinberg Equilibrium for the Genotype of CYP2E1 rs3813867.
Light Element Abundance Patterns in the Orion Association: I) HST Observations of Boron in G-dwarfs
Creators: name: Cunha, K.
name: Smith, V.
name: Parizot, E.
name: Lambert, D.
Publisher: name: arXiv
Year: 2000
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: The boron abundances for two young solar-type members of the Orion association, BD -6 1250 and HD 294297, are derived from HST STIS spectra of the B I transition at 2496.771 A. The best-fit boron abundances for the target stars are 0.13 and 0.44 dex lower than the solar meteoritic value of log e(B)=2.78. An anticorrelation of boron and oxygen is found for Orion when these results are added to previous abundances obtained for 4 B-type stars and the G-type star BD -5 1317. An analysis of the uncertainties in the abundance calculations indicates that the observed anticorrelation is probably real. The B versus O relation observed in the Orion association does not follow the positive correlation of boron versus oxygen which is observed for the field stars with roughly solar metallicity. The observed anticorrelation can be accounted for by a simple model in which two poorly mixed components of gas (supernova ejecta and boron-enriched ambient medium) contribute to the new stars that form within the lifetime of the association. This model predicts an anticorrelation for Be as well, at least as strong as for boron.
description: 16 pages + 1 table + 7 figures, accepted for publication in ApJ
title: ADCO, Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Cart. 32 (G 136), 745 folios, f. 1416
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
name: Petot, Frédéric
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: cartulaire

description: Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Archives départementales de la Côte-d'Or, Cart. 32 (G 136), 745 folios, f. 1416, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Archives départementales de la Côte-d'Or, Cart. 32 (G 136), 745 folios, f. 1416, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
The CMU-ARK German-English Translation System
Creators: name: Dyer, Chris
name: Gimpel, Kevin
name: Clark, Jonathan H.
name: Smith, Noah A.
Publisher: name: Carnegie Mellon University
Year: 2011
Subjects: subject: 89999 Information and Computing Sciences not elsewhere classified
subject: FOS: Computer and information sciences

description: This paper describes the German-English translation system developed by the ARK research group at Carnegie Mellon University for the Sixth Workshop on Machine Translation (WMT11). We present the results of several modeling and training improvements to our core hierarchical phrase-based translation system, including: feature engineering to improve modeling of the derivation structure of translations; better handing of OOVs; and using development set translations into other languages to create additional pseudoreferences for training.
Distribution of contact forces in a homogeneous granular material of identical spheres under triaxial compression
Creators: name: Evesque, P.
Publisher: name: arXiv
Year: 2005
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: The distribution P(F) of contact forces F in a homogeneous isotropic disordered granular sample subject to uniform triaxial stress field is studied using a model where forces propagate and collide. Collisions occur at grain and obey given rules which allow satisfying local static equilibrium. Analogy with Boltzmann's equation of density evolution is drawn and used to derive the parameters that control the distribution Ps(F) of contact forces F in the stationary state in case of a packing of mono-disperse spheres. Using symmetry argument and mean field approximation, it is found that stationarity is achieved when the density Ps(F) of force can be written as the product of exponentials of quantities whose sums are preserved during collisions. This introduces 3 parameters in 2d and 6 in 3d which are the mean force components {Fxo, Fyo, Fzo}, and the mean torques of the force on a grain {Mxo, Myo, Mzo} >. Astonishingly, it seems that the theory cannot include distribution of contact orientation implicitly. Extension of the model is possible with some care to case of anisotropic packing. Pacs # : 5.40 ; 45.70 ; 62.20 ; 83.70.Fn
description: 14 pages + 1 page, 3 figures