cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Acellomyia mapuche
Creators: name: González, Christian R.
name: Elgueta, Mario
name: Krolow, Tiago K.
name: Henriques, Augusto L.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Tabanidae
Acellomyia
Acellomyia mapuche

description: Acellomyia mapuche (Coscarón & Philip, 1967a)
Dasybasis (Agelanius) paulseni mapuche Coscarón & Philip, 1967a: 99 (in key).
Holotype. Male (MAC). Type-locality: Argentina, Copahue, Neuquén Province.
Distribution. Argentina: Provincia de Neuquén. Chile: Región Metropolitana (Santiago); Región de La Araucanía (Malleco).
References. Coscarón & Philip, 1967a: 99 (in key, ssp. of Dasybasis (Agelanius) paulseni); Coscarón, 1967b: 122 (Argentina spp., ssp. of Dasybasis (Agelanius) paulseni); Coscarón & Philip, 1967b: 213, figs. 94A–F, 95A–D., ssp. of Dasybasis (Agelanius) paulseni); Fairchild, 1971: 43 (cat., ssp. of Dasybasis (Agelanius) paulseni); Coscarón, 1972a: 71 (tax., ssp. of Dasybasis (Agelanius) paulseni); Moucha, 1976: 224 (cat., ssp. of Dasybasis (Agelanius) paulseni); Arnaud, 1985: 135 (Philip’s species); Coscarón & González, 1991: 131 (Chile spp., ssp. of Dasybasis (Agelanius) paulseni); Fairchild & Burger, 1994: 71 (cat., ssp. of Dasybasis (Agelanius) paulseni); Coscarón, 1998: 350 (list, dist., Dasybasis (Agelanius )); González, 1999: 162, (rev., figs. 69–72, ssp. of Acellomyia paulseni); Coscarón & Papavero, 2009b: 58 (cat., ssp. of Acellomyia paulseni); Bachmann, 2012: 104 (typ.); González, 2017: 528–530 (rev., fig. 3A-H).
description: Published as part of González, Christian R., Elgueta, Mario, Krolow, Tiago K. & Henriques, Augusto L., 2022, Catalog of the horse-flies (Diptera: Tabanidae) of Chile, pp. 201-257 in Zootaxa 5091 (2) on page 228, DOI: 10.11646/zootaxa.5091.2.1, http://zenodo.org/record/5843635
Bifurcations of equilibria in DNA elasticity
Creators: name: Biton, Yoav
Publisher: name: No Publisher Supplied
Year: 2007

description: DNA molecules in the familiar double helical B form are treated here as though they have rod-like structures obtained by stacking thenearly planar base pairs comprising them one on top of another with each rotated by approximately one-tenth of a full turn with respectto its immediate predecessor in the stack. As each base in a base pair is attached to the sugar-phosphate backbone chain of one of thetwo DNA strands that have come together to form the Watson-Crick structure, and each phosphate group in a backbone chain bears one electronic charge, two such charges are associated with each base pair. Thus, each base pair is subject to not only the elastic forces and moments exerted on it by its neighboring base pairs but also to remote electrostatic forces that, because they are only partially screened out by positively charged counter ions, can render the molecule's equilibrium configurations sensitive to changes in the concentration c of salt in the medium.The observation that the step from one base pair to the next can be one of several distinct types, each having its own mechanical properties that depend on the nucleotide composition of the step, and the assumption that a base pair is rigid, led to the development of a theory of sequence dependent DNA elasticity [Coleman, Olson, and Swigon, J. Chem. Phys. 118 ,7127-7140, (2003)].  The theory of DNA molecules in aqueous solution developed here is based on but goes beyond that theory. It takes into account the intramolecular electrostatic interactions of the negatively charged phosphate groups in the molecule and the impenetrability of the DNA molecule for cases in which theelectrostatic repulsive forces do not suffice to avoid self penetration. The theory permits one to calculate equilibrium configurations, to determine their stability, and to study the dependence of them on salt concentration and on all kinds of end conditions.When the intramolecular electrostatic forces are taken into account, the equations of mechanical equilibrium for a DNA molecule with N+1 base pairs are a system of mu*N non-linear equations, where mu, the number of kinematical variables describing the relative displacement and orientation of adjacent base pairs is in general 6; it reduces to 3 when base-pair steps are assumed to be inextensible and non-shearable. An efficient numerically stable computational scheme is here presented forsolving those equations and determining the mechanical stability of the calculated equilibrium configurations. That scheme is employed to compute and analyze bifurcation diagrams in which c is the bifurcation parameter and to show that, for an intrinsically curved molecule, small changes in c can have a strong effect on stableequilibrium configurations. Cases are presented in which self-contact must be taken into account even though the intramolecular electrostatic forces of repulsion are strong.
Debus excavus Smith & Beaver & Sittichaya 2022, comb. nov.
Creators: name: Smith, Sarah M.
name: Beaver, Roger A.
name: Sittichaya, Wisut
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Debus
Debus excavus

description: Debus excavus (Schedl, 1964) comb. nov.
Xyleborus excavus Schedl, 1964: 249.
Remarks. The holotype and a paratype (NHMUK) have been examined by RAB, and a photograph of a paratype (NHMW) by all authors. The species has the characteristics of Debus given above for D. abscissus and is here transferred to that genus.
Distribution. East Malaysia.
description: Published as part of Smith, Sarah M., Beaver, Roger A. & Sittichaya, Wisut, 2022, One hundred eighteen taxonomic changes among Xyleborine ambrosia beetles (Coleoptera: Curculionidae: Scolytinae), pp. 151-175 in Zootaxa 5194 (2) on page 160, DOI: 10.11646/zootaxa.5194.2.1, http://zenodo.org/record/7147098
Hyperolius nitidulus Peters 1875
Creators: name: Segniagbeto, Gabriel Hoinsoudé
name: Ohler, Annemarie
name: Rödel, Mark-Oliver
name: Luiselli, Luca
name: Dubois, Alain
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Amphibia
Anura
Hyperoliidae
Hyperolius
Hyperolius nitidulus

description: Hyperolius nitidulus Peters, 1875
(Fig. 9 A-D)
MATERIAL EXAMINED. — Togo • 7 ♂; Niamtougou; MNHN-RA-1997.9922-9926, MNHN-RA-1993.6103, MNHN-RA-1993.6104 • 3 ♂; Siou; Coll. GHS-W 1376-1378 • 19 ♂; N’Gambi (Oti-Kéran National Park); MNHN-RA-2008.0221-0228, Coll. GHS-W 0511-0520 • 6 ♂; Bounako (Fazao National Park); Coll. GHS-W 1932, Coll. GHS-W 1934, Coll. GHS-W 1935, Coll. GHS-W 1938, Coll. GHS-W 1941, Coll. GHS-W 1943 • 1♂; Tchamba; ZMB 77904 • 6 ♀; N’Gambi; Coll. GHS-W 0555-0557.
DESCRIPTION. — Relatively slender-bodied frog (SVL 20.4-31 mm ♂, 27-34.2 mm ♀), with comparatively stocky head and an oval snout. Head as long as broad (HW 27-31% SVL; HL 29-34% SVL). Tympanum barely distinct, covered by skin (TYD 2-5% SVL). Tibia moderately long (TL 43-55% SVL). Webbing rather large, leaving sup to two phalanges free; webbing formula: I 1 – 1 ½ II ½ - 1 ½ III ½ – 2 IV 1 ½ – ½ V. Toes and fingers terminated by discs. Skin uniformly smooth over entire back and flanks; belly and chest granular.
COLOURATION. — This species has a yellowish or grayish colour. Juveniles are uniform gray to brown, and turn white at temperatures above 35°C (see summary of the biology in Rödel [2000]). Adults vary from almost uniform yellow with darker lateral bands and blotches to yellow dorsal colouration with brown or dark spots of varying shapes and sizes much. The ventral side is white.
SEXUAL DIMORPHISM. — The throat of male shows a yellow gland on the subgular vocal sac.
HABITATS AND DISTRIBUTION. — In Togo this species is characteristic for the Sudanian savannahs. It is very frequent in the North (Kéran Park and around Niamtougou). In the rainy season it often perches on grasses, shrubs or any other pond plant. The southern limit of its distribution in Togo is at Togodo National Park, in ecological zone IV. Specimens were collected in the north-western part along the Atakora mountain range between the villages of Souroukou and Malfakassa in the Bassar region, mainly in the locality of Bounako. The presence of this species in Togo has also been reported by Bourgat (1979) and Segniagbeto et al. (2022).
description: Published as part of Segniagbeto, Gabriel Hoinsoudé, Ohler, Annemarie, Rödel, Mark-Oliver, Luiselli, Luca & Dubois, Alain, 2024, Amphibians of Togo: taxonomy, distribution and conservation status, pp. 631-670 in Zoosystema 46 (25) on page 648, DOI: 10.5252/zoosystema2024v46a25, http://zenodo.org/record/13907152
Developmente of containmentFOAM towards LW-SMR analyses
Creators: name: Vázquez-Rodríguez, Carlos
name: Kelm, Stephan
Publisher: name: Forschungzentrum Jülich
Year: 2024

description: 5th Generation IV and Small Reactors (G4SR) Conference, Ottawa, Canada, 1 Oct 2024 - 4 Oct 2024
description: see attached
Machine Learning for the Characterization of Porous Transport Layers
Creators: name: Froning, Dieter
name: Hoppe, Eugen
name: Müller, Martin
name: Peters, Ralf
Publisher: name: Forschungzentrum Jülich
Year: 2024

description: ModVal 2025, Karlsruhe, Germany, 11 Mar 2025 - 12 Mar 2025
description: See attached file
Acellomyia paulseni
Creators: name: González, Christian R.
name: Elgueta, Mario
name: Krolow, Tiago K.
name: Henriques, Augusto L.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Tabanidae
Acellomyia
Acellomyia paulseni

description: Acellomyia paulseni (Philippi, 1865)
Tabanus paulseni Philippi, 1865: 721–722.
Archiplatius trianguliferus Enderlein, 1925: 374. Holotype. Female (ZMHB), Santiago. Kröber, 1934: 302 (cat., Tabanus (Agelanius )); Stuardo, 1946: 75 (cat., Dasybasis); Coscarón, 1962b: 52 (dist., Dasybasis (Agelanius )); Coscarón & Philip, 1967b: 208 (syn., Dasybasis (Agelanius )).
Archiplatius trianguliferus var. ochraceus Enderlein, 1925: 374. Holotype. Female (ZMHB), Longaví, Baños de Longaví. Kröber, 1934: 302 (cat., Tabanus (Agelanius), trianguliferus var.); Stuardo, 1946: 75 (cat., Dasybasis); Coscarón & Philip, 1967b: 208 (syn., Dasybasis (Agelanius )).
Tabanus (Agelanius) tephrodes; Kröber, 1930e: 151; Coscarón & Philip, 1967b: 253 (com.).
Holotype. Female (MNNC). Type locality: “ Chile ” (without precise locality).
Distribution. Argentina: Provincias de Chubut, Neuquén, Río Negro, Santa Cruz. Chile: Región de Valparaíso (Quillota); Región del Maule (Linares, Talca); Región de Ñuble (Diguillín); Región del Biobío (Arauco, Biobío); Región de La Araucanía (Cautín, Malleco); Región de Los Ríos (Valdivia); Región de Los Lagos (Llanquihue, Osorno); Región de Aysén (Carrera).
References. Hunter, 1901: 143 (cat., Tabanus); Porter, 1902: 249 (Chile spp., Tabanus); Kertész, 1908: 268 (cat., Tabanus); Kröber, 1934: 301 (cat., Tabanus (Agelanius )); Ruíz & Stuardo, 1935: 315 (list, Tabanus); Stuardo, 1946: 74 (cat., Dasybasis); Coscarón & Philip, 1967a: 99 (in key, Dasybasis); Coscarón, 1967b: 121 (Argentina spp., Dasybasis (Agelanius )); Coscarón & Philip, 1967b: 208 (rev., figs. 92A–K, 93A–E (Dasybasis (Agelanius )); Philip, 1968a: 13 (tax., Philippi’s types); Fairchild, 1971: 43 (cat., Dasybasis (Agelanius )); Coscarón, 1972a: 71 (tax., Dasybasis (Agelanius )); Pino, 1975b: 192 (list); Moucha, 1976: 224 (cat., Dasybasis (Agelanius )); Coscarón & González, 1991: 131 (Chile spp., Dasybasis (Agelanius )); González, 1993: 110–111 (sea. occ.); Fairchild & Burger, 1994: 71 (cat., Dasybasis (Agelanius )); Coscarón, 1998: 350 (list, dist., Dasybasis (Agelanius )); González, 1999: 160 (rev., figs. 64–68); Coscarón & Papavero, 2009b: 57 (cat.); González, 2017: 530–532 (rev., figs. 4A–H).
description: Published as part of González, Christian R., Elgueta, Mario, Krolow, Tiago K. & Henriques, Augusto L., 2022, Catalog of the horse-flies (Diptera: Tabanidae) of Chile, pp. 201-257 in Zootaxa 5091 (2) on page 229, DOI: 10.11646/zootaxa.5091.2.1, http://zenodo.org/record/5843635
Capillary electrophoresis -- high resolution inductively coupled plasma mass spectrometry: elemental speciation and applications in pharmaceutical process research
Creators: name: Bu, Xiaodong
Publisher: name: No Publisher Supplied
Year: 2007

description: The high efficiency of capillary electrophoresis (CE) was combined with the element specificity and low detection limits of high resolution inductively coupled plasma mass spectrometry (HR-ICP MS) for rapid elemental speciation. A novel sheath flow interface coupled to a PFA Teflon micro-flow concentric nebulizer was developed to provide an efficient method for interfacing capillary electrophoresis with the inductively coupled plasma.  The sheath interface provides control over the nebulizer induced laminar flow in the separation capillary allowing the tradeoff between separation efficiency and analysis time to be selected. In chapter 3, this CE-HR-ICP-MS system was used to study various hydration/hydrolysis processes of hexachloro complexes of Rh in aqueous solutions. The migration speed of various mixed aquo/chloro rhodium species through the capillary depends on the charges they carry, which is dictated by the solution pH as well as their aging period in the solution. Several Rh species were tentatively identified according to their relative mobilities and their equilibrium distributions were quantified using peak area calculation in the experiments. In chapter 4, to meet the need of speciation analysis for applications in pharmaceutical process research, a non-aqueous CE with HR-ICP-MS detection method was developed. The novel sheath interface between the CE and ICP-MS enabled the use of CE with up to 100% organic electrolyte without organic loading in the plasma. Two unique aspects of non-aqueous CE, non-aqueous CE with wide-bore capillaries and influence of organic solvent on the CE separation selectivity were discussed.  Information on chemical speciation is much needed in mechanistic and kinetic studies on catalyst formation processes in pharmaceutical research. In chapter 5, non-aqueous CE-ICP-MS speciation analysis was applied to the identification and quantification of various rhodium species involved in a ligand exchange process leading to formation of catalyst dirhodium(II) tetrakis[methyl 2-oxopyrrolidin-5(S)-carboxylate]. A variety of reaction intermediates were identified and quantified along the pathway to formation of the desired product. This has provided new insights into the mechanism and kinetics of the reaction. In chapter 6, the feasibility of the determination of sub ppm to percentage levels of halogen elements (fluorine, chlorine, bromine, and iodine) in solid organic compounds and drug substances by HR-ICP-MS was investigated. In chapter 7, the application of HR-ICP-MS for the determination of isotopic composition of enriched stable isotope calcium samples is described. The interferences from 40Ar isotope at the calcium mass 40 are greatly minimized by operating the ICP-MS in the cool plasma mode. The rest polyatomic ions are overcome by high resolution mode of the ICP-MS.
Genetic variation and population structure in wild isolates of Caenorhabditis elegans collected from California
Creators: name: Dey, Alivia
Publisher: name: No Publisher Supplied
Year: 2007

description: Though much widespread in distribution, the nematode worm Caenorhabditis elegans exhibits low levels of genetic variation at the DNA sequence level, a paradox which may be partly explained by its typical self-fertilization mode of reproduction. However recent work on the genetic structure of natural populations of C. elegans from France, Scotland and Portugal suggests a substantial level of outcrossing together with finding of a very strong local population structure. To find out whether this same occurrence extrapolates to other wild isolates of worm populations, the present study was carried on worm populations from California. Here, genetic variation is studied by detecting single nucleotide polymorphisms in a random genome-wide manner using Amplified Fragment Length Polymorphism analysis (AFLP).   The worms used in this study are natural isolates of C. elegans collected from parks and gardens around the Los Angeles area in southern California.  Some populations sampled were a few meters apart, enabling the assessment of variation and population structure on a very local scale. As previous studies, a low overall genetic diversity was found with these worm populations. The finding of a strong population structure and high linkage disequilibrium both within and between chromosomes was also concurrent with the findings from other wild isolates. All these findings elucidate the extra-ordinary evolutionary dynamics of these sets of worm from the wild.
Essays on international trade, protectionism and financial flows
Creators: name: Ganguli, Bodhisattva
Publisher: name: No Publisher Supplied
Year: 2007

description: This dissertation brings together three essays investigating the changing dynamics of international trade, protection and financial flows since the mid-1980s, a period marked by the beginning of sharp increases in the worldwide flows of goods and capital. In the first essay, I study empirically the effect of Indian Antidumping (AD) cases on trade flows from other countries. India files the highest number of AD cases in the world, with an outstanding majority of such cases resulting in protection for the domestic firms. I also look at the effect of AD cases on trade diversion from countries subject to or "named" in AD investigations to non-subject or "non-named" countries and conclude that Indian AD policy is effective. I use a unique dataset combining AD data from the WTO with trade data from Comtrade. The empirical model is estimated via the Arellano-Bond procedure.The second essay builds on the first one. Here, I use a capital market event study to empirically analyze the effects of the huge level and extent of Indian AD protection; in efficient capital markets such gains should be immediately capitalized in the protected firms' stock prices. I also perform cross-section regressions to study the influence of key firm variables on market reaction. I use a unique dataset combining AD data from the WTO with firm level stock price data from the Bombay Stock Exchange. Results indicate that there is no perceptible response from the Indian stock market to AD protection. The cross-section results corroborate this evidence.Finally, the third essay looks at the remarkable upsurge in global capital flows since the mid-1980's and associated issues in the current account and net external position of countries. The growing divergence between the current account and changes in the net international investment position of countries is looked at empirically and investigated with the aid of a model of BoP accounting. I estimate a Probit model of currency crises using annual BoP data for a panel of 84 countries and conclude that the identity between the current account and changes in the net international investment position holds only in theory.
Additional file 1: Table S1. of KCNMA1 cooperating with PTK2 is a novel tumor suppressor in gastric cancer and is associated with disease outcome
Creators: name: Gaoxiang Ma
name: Hanting Liu
name: Qiuhan Hua
name: Meilin Wang
name: Mulong Du
name: Yadi Lin
name: Yuqiu Ge
name: Weida Gong
name: Qinghong Zhao
name: Fulin Qiang
name: Guoquan Tao
name: Zhengdong Zhang
name: Haiyan Chu
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology
subject: Computational Biology

description: Clinical characteristics of 12 gastric cancer cases selected in microarray analysis. Table S2. Sequences of primers used in RT-PCR and MSP assay. (PDF 113 kb)
Acellomyia puyehue Gonzalez 2017
Creators: name: González, Christian R.
name: Elgueta, Mario
name: Krolow, Tiago K.
name: Henriques, Augusto L.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Tabanidae
Acellomyia
Acellomyia puyehue

description: Acellomyia puyehue González, 2017: 532–535, fig. 5A-K.
Holotype. Female (UMCE). Type-locality: Chile, Antillanca, Osorno Province.
Distribution. Chile: Región de Los Lagos (Osorno).
description: Published as part of González, Christian R., Elgueta, Mario, Krolow, Tiago K. & Henriques, Augusto L., 2022, Catalog of the horse-flies (Diptera: Tabanidae) of Chile, pp. 201-257 in Zootaxa 5091 (2) on page 229, DOI: 10.11646/zootaxa.5091.2.1, http://zenodo.org/record/5843635
Developmente of containmentFOAM towards LW-SMR analyses
Creators: name: Vázquez-Rodríguez, Carlos
name: Kelm, Stephan
Publisher: name: Forschungzentrum Jülich
Year: 2024

description: SASPAM-SA Open Workshop, Roses, France, 17 Oct 2024 - 18 Oct 2024
description: see attached
Study of simplified models of aircraft structures subjected to generalized explosive loading
Creators: name: Florek, Jason R.
Publisher: name: No Publisher Supplied
Year: 2007

description: This dissertation develops a simple methodology for estimating the maximum elastic-plastic deformation of thin, rectangular plates due to an exponentially decaying pressure pulse.  Initially, only small plates, representative of aircraft skin panels, and uniformly distributed pressures are examined.  The deflections predicted by this procedure are compared with those attained from finite element analysis for various plate dimensions and blast intensities.  Material properties and boundary conditions are also varied.  It is found that the current, clamped single-degree-of-freedom model is generally a much better predictor of deflection than its simply supported counterpart, although both show average errors of less than 15% compared to finite element results.  The deviations between all of the models tend to decrease as surface area decreases, or as plate thickness and aspect ratio increase.  A means of approximating permanent plate deflection is also suggested, which favorably compares with previously published experimental results for square, aluminum plates.The aforementioned procedure is then extended for use with larger geometries, namely a wider fuselage section and a panel of an onboard luggage container, and nonuniform pressures.  A generalized distribution function is developed to account for nonuniformities consistent with detonations at a small standoff distance.  Moreover, two normalized criteria are proposed to determine when these nonuniformities can be ignored.  In addition, large discrepancies are found in calculated deflections when incorporating the current structural model and the blast parameter data from two commonly used sources for both uniform and nonuniform loading cases.  As a result, uncertainties in these data are thoroughly examined, which leads to confidence bounds being placed on all calculated deflections through a Monte Carlo scheme.  This, in turn, allows for the generation of probability of failure curves.Suggestions for improving the current loading and structural models are also discussed.  Finally, the method of analysis for plates is preliminarily extended for the blast loading of thin, cylindrical shells.  The various topics covered and simplified models proposed are useful to both the experimentalist and designer of blast resistant structures.
Debus fischeri Smith & Beaver & Sittichaya 2022, comb. nov.
Creators: name: Smith, Sarah M.
name: Beaver, Roger A.
name: Sittichaya, Wisut
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Debus
Debus fischeri

description: Debus fischeri (Hagedorn, 1908) comb. nov.
Xyleborus fischeri Hagedorn, 1908: 380.
Remarks. A possible syntype (NHMW) from Hagedorn’s series was examined by RAB, and a photograph of this specimen by all authors. The species has the characteristics of Debus given above for D. abscissus and is here transferred to that genus.
Distribution. ‘Borneo’, Indonesia (Sumatra), Myanmar, West Malaysia.
description: Published as part of Smith, Sarah M., Beaver, Roger A. & Sittichaya, Wisut, 2022, One hundred eighteen taxonomic changes among Xyleborine ambrosia beetles (Coleoptera: Curculionidae: Scolytinae), pp. 151-175 in Zootaxa 5194 (2) on page 160, DOI: 10.11646/zootaxa.5194.2.1, http://zenodo.org/record/7147098
Mechanical properties of the chick embryo spinal cord
Creators: name: Elias, Ragi
Publisher: name: No Publisher Supplied
Year: 2007

description: The mechanical properties of the spinal cord dictate its response to traumatic loading conditions, and also provide important cues to cellular constituents that regulate behavior such as growth and differentiation. After initial connections are established, the structure and composition of the human spinal cord continues to significantly change during development, both pre-natally and during the early years of life. As such, the mechanical properties of the spinal cord are likely to also change, which would potentially alter both the physical tolerance of the spinal cord to injury as well as the regulatory mechanostructural cues that encourage or inhibit neural differentiation and axon growth.  Previous studies have quantified the properties of fully developed adult spinal cords from the rat, cat and human. This study quantifies the mechanical properties of the chick embryo spinal cord during a period of rapid growth and development which partially parallels the development of the post-natal human infant. Quasistatic uniaxial tensile testing to failure was performed on chick embryo spinal cords at 0.001s-1.  Samples were tested at embryological days (E) 14, 15, 16 and 18.  Spinal cords demonstrated non-linear stress-strain behavior that was modeled with a 1-term Ogden hyperelastic strain energy density function. Stiffness and ultimate tensile stress (UTS) were observed with increasing development.Stress-relaxation viscoelastic testing was also performed on spinal cords from the same development days at a loading rate consistent with those experienced during trauma (ramp to 7.5% stretch at ~19.5s-1 and hold for 10 seconds). All spinal cords demonstrated significant relaxation, and the behavior was modeled with a linear series of 4 exponential decay time constants. Statistical analysis indicated that the viscoelastic properties did not change between the days tested. Regardless of the maximum stress reached from the ramp phase, all cords tested relaxed ~72.5% with ~68% of this relaxation occurring within the first 30ms. The changes in the stiffness and UTS in the developing chick embryo spinal cord suggest similar changes in the developing human spinal cord, which points to the need for age-specific injury tolerance criteria.
Hyperolius concolor
Creators: name: Segniagbeto, Gabriel Hoinsoudé
name: Ohler, Annemarie
name: Rödel, Mark-Oliver
name: Luiselli, Luca
name: Dubois, Alain
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Amphibia
Anura
Hyperoliidae
Hyperolius
Hyperolius concolor

description: Hyperolius concolor (Hallowell, 1844)
(Fig. 6A, B)
MATERIAL EXAMINED. — Togo • 2 ♂; Akloa; MNHN-RA-2008.0101, MNHN-RA-2008.0102 • 4 ♂, 2 ♀; Badou; MNHN-RA-1993.6126-6131 • 1 ♂; Missahohé; ZMB 36090 • 3 ♂; Yégué; Coll. GHS-W 0696, Coll. GHS-W 0699, Coll. GHSW 0993 • 3 ♂; Adjarala; Coll. GHS-W 1836, Coll. GHS-W 1837, Coll. GHS-W 1840 • 2 ♂; Yikpa-Dzigbe; Coll. GHS-W 1971, GHS-W 1972 • 3 ♂; MNHN-RA-1994.4496-4498 • 3 ♂; Tchamba; ZMB 77901 -77903 • 3 ♀; Lomé; MNHN-RA-1993.6088-6091.
DESCRIPTION. — Slender to compact-bodied frog (SVL 24.8- 32.5 mm ♂, 28.5-37.1 mm ♀), more robust than previous species. Snout rounded or oval. Head slightly longer than broad (HW 28- 34% SVL; HL 31-39% SVL). Tympanum distinct, very small (TYD 2-5% SVL). Tibia moderately long (TL 46-49% SVL). Webbing large; webbing formula: I 1 – 1 ½ II ½ – 1 ½ III 1 – 1 IV 1 – ½ V. Fingers and toes terminated by disks. Skin uniformly smooth in the dorsal parts; smooth flanks; belly and chest granular.
COLOURATION. — The dorsum is uniformly yellow or yellowish in life in males (with darker dorsal pattern) and green in females during the day. At night both sexes are yellow. Colour turns gray in alcohol. The ventral side is white.
SEXUAL DIMORPHISM. — Sexes differ in colour and males have a yellow gland on the subgular vocal sac. Females are larger than males.
HABITATS AND DISTRIBUTION. — This species is distributed in all ecological zones of the country. Field observations and museum vouchers indicate a higher frequency in the forest area (Badou region up to the boundary of Fazao). It is characteristic of savannahs associated with forest areas near water points (ponds or rivers). A few specimens were collected in gallery forests along the Yégué River in Adélé and along the gallery forest that leads to the Akloa waterfall in Badou. This species was reported in Togo by Ahl (1931) under the junior subjective synonyms Hyperolius depressus Ahl, 1931, Hyperolius togoensis Ahl, 1931, Hyperolius moseri Ahl, 1931 and Hyperolius narinus Ahl, 1931 (see Bourgat 1979; Segniagbeto et al. 2007, 2022; Tillack et al. 2021).
description: Published as part of Segniagbeto, Gabriel Hoinsoudé, Ohler, Annemarie, Rödel, Mark-Oliver, Luiselli, Luca & Dubois, Alain, 2024, Amphibians of Togo: taxonomy, distribution and conservation status, pp. 631-670 in Zoosystema 46 (25) on page 644, DOI: 10.5252/zoosystema2024v46a25, http://zenodo.org/record/13907152
Large scale feature extraction and tracking
Creators: name: Dhume, Pinakin
Publisher: name: No Publisher Supplied
Year: 2007

description: The goal of Scientific Visualization is to provide a more intuitive interpretation of the data being presented. Traditionally, visualization of 3D time-varying datasets is done using animation based on either iso-surfacing or volume rendering. However, for datasets with continuously evolving features it is difficult to follow and see patterns in 3D. An automated procedure to track features and to detect particular events in their evolution can help scientists to concentrate on regions and phenomena of interest.Today, computations and simulations are performed on massively parallel computers leading to thousands of datasets where each datasets can be on the order of gigabytes. Visualizing and quantifying such data cannot be done on a single processor machine. Therefore, a distributed form of the feature extraction and feature tracking algorithms is required. In the Vizlab, we have developed a number of tools to extract and track features on a parallel cluster. However, there are cases where one would like to handle large datasets. In this thesis, we extend the feature extraction and tracking library to perform feature extraction on a large datasets with multiple steps, i.e., reading in only a portion of the data at once. In addition to the distributed feature tracking, we also enhanced the visualization component so that features can be accessed and rendered in a more intuitive fashion.
Additional file 3: of Electrical somatosensory stimulation followed by motor training of the paretic upper limb in acute stroke: study protocol for a randomized controlled trial
Creators: name: Ghaziani, Emma
name: CouppĂŠ, Christian
name: Henkel, Cecilie
name: Siersma, Volkert
name: SĂ¸Ndergaard, Mette
name: Christensen, Hanne
name: S. Magnusson
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Computational Biology

description: The SPIRIT Checklist for the study protocol. (DOC 121 kb)
MOESM7 of SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation
Creators: name: Kidder, Benjamin
name: Gangqing Hu
name: Kairong Cui
name: Keji Zhao
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Pharmacology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Plasma Physics
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Additional file 7: Figure S7. Depletion of SMYD5 leads to decreased H4K20me3, H3K9me3, and HP1α at LINE/LTR repeats. (A) Peptide pull-down assays using ES cell nuclear extracts and unmodified or modified H4/H3 peptides were performed and analyzed by immunoblotting with anti-HP1α, anti-G9a, and anti-ESET antibodies. (B) Empirical cumulative distribution for the density of H4K20me3 (top left panel), H3K9me3 (bottom left panel), HP1α (bottom right panel) at LINE regions in shLuc and shSmyd5 ES cells, and SMYD5-FLAG in ES cells (top right panel). (C) Empirical cumulative distribution for the density of H4K20me3 (top left panel), H3K9me3 (bottom left panel), HP1α (bottom right panel) at LTR regions in shLuc and shSmyd5 ES cells, and SMYD5-FLAG in ES cells (top right panel).
Telmatoscopus undetermined
Creators: name: Vieira, Gabriel Santos
name: Bravo, Freddy
name: Limeira-De-Oliveira, Francisco
name: Rafael, José Albertino
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Psychodidae
Telmatoscopus
Telmatoscopus undetermined

description: Telmatoscopus sp.
Unidentified species
Remarks. The examined specimens fit the genus Telmatoscopus Eaton by presenting asymmetrical nodiform flagellomeres, with a pair of single-branched S-shaped ascoids, 14 th flagellomere with elongated apiculus, fourth palp segment striated, vein R 5 ending beyond wing apex, aedeagus plate-like, epandrium with two small apertures. According to Ježek (1989) and Bravo et al. (2011), Telmatoscopus is probably a polyphyletic genus, and most species belong to undescribed genera. With the revision of Telmatoscopus by Kvifte (2014), the neotropical species of the genus are placed out of it without proper placement into other genera. Thus, a review of the neotropical species and the delimitation of genera that encompass them is necessary to describe this species appropriately. For a while, we have been tentatively treating the Fernando de Noronha specimens in Telmatoscopus.
Furthermore, it appears to be a new species that shares a distinctive feature in the male terminalia and spines in the plate-like aedeagus, with the species Telmatoscopus paranaensis Bravo & Souza and Telmatoscopus thompsoni Wagner, the latter endemic to volcanic islands in Central America.
Material examined. Slide-mounted. (12 specimens) Brasil, PE, Fernando de Noronha, 3º51’17"S 32º26’26"W, Capim-Açu, 1-9.vi.2019, Malaise G, J. A. Rafael, F. Limeira-de-Oliveira, L. C. Castro; Same locality, 8-23.vii.2019. Alcohol. (353 specimens) Same locality, 24.vi-8.vii.2019; 23.vii-7.vii.2019; 7-21.viii.2019; 21.viii-8.ix.2019; 25.ix-8.x2019; 8-27.x.2019; 11-27.xi.2019; 27.xi-9.xii.2019; 23.i-12.ii.2020 (MZFS).
description: Published as part of Vieira, Gabriel Santos, Bravo, Freddy, Limeira-De-Oliveira, Francisco & Rafael, José Albertino, 2024, The Psychodidae (Diptera) of Fernando de Noronha, Brazil, with a records overview of volcanic islands fauna, pp. 322-338 in Zootaxa 5538 (4) on page 324, DOI: 10.11646/zootaxa.5538.4.2, http://zenodo.org/record/14611780
Proper nouns
Creators: name: Cumming, Samuel
Publisher: name: No Publisher Supplied
Year: 2007

description: This dissertation is an experiment: what happens if we treat proper names as anaphoric expressions on a par with pronouns? The first thing to notice is that a name's `antecedent' can occur in a discourse prior to the one containing the name. An individual may be introduced and tagged with a name in one context, and then retrieved using the name in a later context. To allow for discourse-crossing anaphora, in addition to the usual cross-sentential anaphora, a revision of discourse semantics is in order. Essentially, we must countenance discourse referents that span contexts, and think of contexts, not as islands, but as nodes connected to each other by the discourse referents they share.Discourse semantics gives rise to a new notion of content determined by discourse reference rather than pure reference. In a space of contexts structured by shared discourse referents, discourse content becomes transmissable. For a piece of content may be sent from one context to another whenever the discourse referents bundled up in the content are held in common by the two contexts.The final step is to treat the cognitive state of an agent as just another kind of context, and so a potential recipient of discourse content. Discourse content is more fine-grained than traditional `singular' content, and so is a better fit for our pretheoretic intuitions about communication and attitude reporting. This is illustrated by applying the theory to Frege's puzzle, a puzzle of Loar's about communication, Kripke's puzzle about belief, Geach's intentional identity and new breed of `mixed' de re-de dicto sentence.
MOESM10 of Nontargeted homologue series extraction from hyphenated high resolution mass spectrometry data
Creators: name: Loos, Martin
name: Singer, Heinz
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Medicine
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Cancer
subject: Inorganic Chemistry
subject: Plant Biology
subject: Virology

description: Additional file 10. Â STP series detection characteristics following randomization.
MOESM7 of SMYD5 regulates H4K20me3-marked heterochromatin to safeguard ES cell self-renewal and prevent spurious differentiation
Creators: name: Kidder, Benjamin
name: Gangqing Hu
name: Kairong Cui
name: Keji Zhao
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Pharmacology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Plasma Physics
subject: Hematology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology
subject: Computational Biology

description: Additional file 7: Figure S7. Depletion of SMYD5 leads to decreased H4K20me3, H3K9me3, and HP1α at LINE/LTR repeats. (A) Peptide pull-down assays using ES cell nuclear extracts and unmodified or modified H4/H3 peptides were performed and analyzed by immunoblotting with anti-HP1α, anti-G9a, and anti-ESET antibodies. (B) Empirical cumulative distribution for the density of H4K20me3 (top left panel), H3K9me3 (bottom left panel), HP1α (bottom right panel) at LINE regions in shLuc and shSmyd5 ES cells, and SMYD5-FLAG in ES cells (top right panel). (C) Empirical cumulative distribution for the density of H4K20me3 (top left panel), H3K9me3 (bottom left panel), HP1α (bottom right panel) at LTR regions in shLuc and shSmyd5 ES cells, and SMYD5-FLAG in ES cells (top right panel).
Modeling financial markets with heterogeneous interacting agents
Creators: name: Desai, Viral
Publisher: name: No Publisher Supplied
Year: 2007

description: Financial market has been extensively recognized as a complex system, where large number of heterogeneous agents contribute to price formation of asset. Interactions and adaptations of these agents form the core foundation of market operations and its resultant characteristic properties. These market agents are highly diverse in their perception of the world around them and in the way they respond to it. Various studies of statistical properties of financial markets and price fluctuations have revealed a rich set of typical characteristics knows as stylized facts. Agent-based models that can reproduce these stylized facts and explain the roots of complex dynamics of financial market have been subject of intense research in recent time. The Minority Game Model proposed by Challet and Zhang is one such model that presents a simplified paradigm of financial market. Another model proposed by Lux and Marchesi offers a different perspective to agent-based modeling, where parallels are drawn between the physical system with a large number of interacting units and financial markets. The Minority Game model succeeds to a certain extent in reproducing stylized facts and explaining behavioral foundation of it. However, in attempt to present a simplified picture of market scenario both these models make certain assumptions that dilute the heterogeneity aspect of the real market. In real world markets, agents are truly diverse in their thinking, strategy, action and analyzing ability. Due to these unrealistic assumptions, the model can be validated only with a very limited spectrum of parameters. Also, it's difficult to point out precisely which aspects of the game contribute to some of the stylized facts producible with the model. To improve on these issues, we have developed a model and a simulator based on modified minority game, which we are referring to as "adapted minority game." The main focus of our research is on improving the heterogeneity aspect of agents, their interactions, and bringing fundamental value of asset into the Minority Game model. Our model introduces fundamentalist agents into the minority game model and also allows agents to have different historical memory and time horizons. Furthermore, agents are free to switch from one trading strategy group to another to improve their chances of performing better. Reproducing the stylized facts still remains the benchmark for validating our model. Our adapted minority game succeeds to an extent in expanding the spectrum of parameters that can be used for modeling the market. Agents' interactions and adaptations have been tracked down to the basis of stylized facts. An interesting property of periodic volatility is successfully demonstrated with our model.
Hyperolius sylvaticus SchiOtz 1967
Creators: name: Segniagbeto, Gabriel Hoinsoudé
name: Ohler, Annemarie
name: Rödel, Mark-Oliver
name: Luiselli, Luca
name: Dubois, Alain
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Amphibia
Anura
Hyperoliidae
Hyperolius
Hyperolius sylvaticus

description: Hyperolius sylvaticus SchiØtz, 1967
(Fig. 10C)
MATERIALS EXAMINED. — Togo • 1 ♂; Yégué; MNHN-RA-2008.0129 • 2 ♂; Diguengué; Coll. GHS-W-1632, Coll. GHS-W 1657 • 1 ♀; Kovié; MNHN-RA-1993.6093.
ADDITIONAL MATERIALS. — Liberia • 4 ♂; Nimba, MNHN-RA-1998.1392-1395.
Côte d’Ivoire • 2 ♀; Lamto, MNHN-RA-1993.3720, MNHN-RA-1993.7693 • 1 ♂, 1 ♀, paratypes of Hyperolius sylvaticus ivorensis SchiØtz, 1967; 35 km north of Abidjan; MNHN-RA-1993.3722, MNHN-RA-1993.3723 • 4 ♂, paratypes of Hyperolius sylvaticus ivorensis SchiØtz, 1967; Ndenou; MNHN-RA-1993.3724-3727.
Ghana • 1 ♂, paratype of Hyperolius sylvaticus sylvaticus SchiØtz, 1967; Bobiri; MNHN-RA-1993.3729.
Nigeria • 2 ♂, paratypes of Hyperolius sylvaticus nigeriensis SchiØtz, 1967; 6 miles north of University of Ibadan; MNHN-RA-1993.3729.
DESCRIPTION. — Slender-bodied tree frog (SVL 22.5-23.7 mm ♂, 28-30 mm ♀), with pointed snout. Head slightly longer than broad (HW 30-36% SVL; HL 34-37% SVL). Tympanum poorly distinct (TYD 3-5% SVL). Tibia moderately long (TL 46-50% SVL). Webbing large; webbing formula: I 1 – 1 ½ II ½ –1 ½ III ½ – 1 ½ IV 1 ½ – ½ V. Toes and fingers terminated by discs. Skin uniformly smooth over entire back and flanks; belly and chest granular.
COLOURATION. — The dorsal colouration is characterised by a dark mid-dorsal band that includes the inter-orbital band and a sacral spot; in other individuals three large, transversely orientated spots, an inter-orbital, a shoulder and a sacral spot, form the dorsal pattern. The ventral side is white.
SEXUAL DIMORPHISM. — The male has a subgular vocal sac with a gland.
HABITATS AND DISTRIBUTION. — The small number of specimens collected makes it difficult to estimate the species range in Togo. The specimen MNHN-RA-2008.0129 was captured in the gallery forest along the Yégué River in Adélé (Hillers et al. 2009). SchiØtz (1999) indicated that it is mainly a forest species. The distribution localities mentioned in the Volta region between Togo and Ghana (Rödel & Agyei 2003) confirm the range of this species.
TAXONOMY NOTE. — See comment under Hyperolius laticeps.
description: Published as part of Segniagbeto, Gabriel Hoinsoudé, Ohler, Annemarie, Rödel, Mark-Oliver, Luiselli, Luca & Dubois, Alain, 2024, Amphibians of Togo: taxonomy, distribution and conservation status, pp. 631-670 in Zoosystema 46 (25) on pages 648-649, DOI: 10.5252/zoosystema2024v46a25, http://zenodo.org/record/13907152
Additional file 3: of Electrical somatosensory stimulation followed by motor training of the paretic upper limb in acute stroke: study protocol for a randomized controlled trial
Creators: name: Ghaziani, Emma
name: CouppĂŠ, Christian
name: Henkel, Cecilie
name: Siersma, Volkert
name: SĂ¸Ndergaard, Mette
name: Christensen, Hanne
name: S. Magnusson
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy
subject: Mental Health
subject: Computational Biology

description: The SPIRIT Checklist for the study protocol. (DOC 121 kb)
Agelanius Rondani 1864
Creators: name: González, Christian R.
name: Elgueta, Mario
name: Krolow, Tiago K.
name: Henriques, Augusto L.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Tabanidae
Agelanius

description: Genus Agelanius Rondani, 1863: 79–80.
Type-species: Agelanius meridianus Rondani, 1864 (subs. des., Coquillett, 1910: 504). O’Hara et al., 2011: 27 (tax.). Stypommisa, subg. Styphocera Philip, 1968b: 151. Type-species: Stypommisa antennina Philip, 1968b (orig. des.).
References. Enderlein, 1925: 346 (in key), 377 (com.); Kröber, 1929a: 49 (in key); Ruíz, 1929: 238 (list, Agelanius); Kröber 1930f: 140 (in key, as subgenus of Tabanus), 149 (redes., key to species); Ruíz, 1929: 238 (list, Agelanius); Borgmeier, 1933: 287 (tax., as subgenus of Tabanus); Fraga, 1934: 183 (in key, as subgenus of Tabanus); Kröber, 1934: 298 (cat., as subgenus of Tabanus); Bequaert & Renjifo-Salcedo 1946: 56 (in key); Coscarón & Philip 1967a: 96 (in key, as subgenus of Dasybasis); Coscarón & Philip, 1967b: 194 (rev., as subgenus of Dasybasis); Fairchild, 1969: 216 (com., tax., as subgenus of Dasybasis); Fairchild, 1971: 43 (cat., as subgenus of Dasybasis); Moucha, 1976: 223 (cat., as subgenus of Dasybasis); Fairchild & Burger, 1994: 70 (cat., as subgenus of Dasybasis); Coscarón & González, 1991: 131 (list, as subgenus of Dasybasis), 135 (in key); Coscarón & Papavero, 1993: 32 (in key, as subgenus of Dasybasis); Fairchild & Burger, 1994: 70 (as subgenus of Dasybasis); González, 1999: 141 (in key), 141–142 (gen. sta.), 142–143 (key to spp.); Coscarón & Papavero, 2009a: 17 (in key); Coscarón & Papavero, 2009b: 58 (cat.); Coscarón & Papavero, 2014: 4, 6 (imm. sta., in key); Guimaraes et al., 2017: 74 (diag.).
description: Published as part of González, Christian R., Elgueta, Mario, Krolow, Tiago K. & Henriques, Augusto L., 2022, Catalog of the horse-flies (Diptera: Tabanidae) of Chile, pp. 201-257 in Zootaxa 5091 (2) on page 229, DOI: 10.11646/zootaxa.5091.2.1, http://zenodo.org/record/5843635