cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1 of Bayesian latent class analysis produced diagnostic accuracy estimates that were more interpretable than composite reference standards for extrapulmonary tuberculosis tests
Creators: name: MacLean, Emily L.
name: Kohli, Mikashmi
name: Köppel, Lisa
name: Schiller, Ian
name: Sharma, Surendra K.
name: Pai, Madhukar
name: Denkinger, Claudia M.
name: Dendukuri, Nandini
Publisher: name: figshare
Year: 2022
Subjects: subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Supplemental Figure S1. Pairwise residual correlation plots for tests run on A) lymph node, B) CSF, and C) pleural fluid. Test pair 1: culture and Xpert; 2: culture and smear microscopy; 3: culture and cytopathology/histopathology or ADA; 4: Xpert and smear microscopy; 5: Xpert and cytopathology/histopathology or ADA; 6: smear microscopy and cytopathology/histopathology or ADA. ADA – adenosine deaminase; CSF – cerebral spinal fluid; TB – tuberculosis. Supplemental Figure S2. Density plots. For each of the three models (one per form of extrapulmonary TB), density plots were generated for each parameter of interest. For test result parameters specificity, C, and sensitivity, S, the indices 1, …,4 indicate culture, Xpert, smear microscopy, and ADA or cytopathology/histopathology. Supplementary Table S1. Probabilities of the four latent classes, for each form of extrapulmonary TB as estimated by Bayesian latent class analysis. Supplementary Table S2. Diagnostic accuracies of tests for each form of extrapulmonary TB by latent class analysis. Supplementary Table S3. Prevalence of each form of extrapulmonary TB as estimated by the two-class latent class model
Brachyuran crabs of the Gulf of Mexico
Creators: name: Ugalde, Diana
name: Simões, Nuno
Publisher: name: Zenodo
Year: 2019
Subjects: Brachyura
Brachyuran Crabs
Biodiversity
Biodiversity Marine
Gulf of Mexico
Marine Biology
Taxonomy

description: This Infographic is a product of BDMY project (https://www.bdmy.org.mx), that was produced with funds of the Harte Research Institute for Gulf of Mexico Studies.
 The information in the infographic was reviewed and validated by a group of specialists in the taxon. CC-BY-NC-ND
Ecological and Socioeconomic Conflicts in Brazilian Reforestation Policies
Creators: name: Santana, Antonio C. De
name: Bacha, Carlos Jose Caetano
name: Barros, Antonio A.A. De
name: Teixeira, Erly C.
name: Santana, Antonio C. De
name: Bacha, Carlos Jose Caetano
name: Barros, Antonio A.A. De
name: Teixeira, Erly C.
Publisher: name: Unknown
Year: 1995
Subjects: International Development
Land Economics/Use

description: This paper evaluates the socioeconomic impacts and allocation effects of reforestation policies in Brazil. Reforestation is understood to be the activity of planting trees, regardless of purpose. Brazil introduced reforestation incentives in 1961 as native forest supplies became even more distant and costly. These incentives - tax exemptions, credits and input subsidies - were designed to make reforestation more profitable by reducing the typically high cost of planting new forests (Bacha, 1993). Boosted by these incentives, reforestation increased more than elevenfold, from 500 000 ha in 1964 to 5.9 million ha in 1984, at an annual geometric growth rate of 13 per cent. Minas Gerais and Sao Paulo states had the most active fiscal incentives programmes. However, the effectiveness of all such programmes was curtailed by problems such as credit diversion to other activities, projects being abandoned as the result of improper management or poor localization, capital loss due to late credit outlay in an inflationary economy, and income concentration following tax exemptions and subsidies that discriminated against small and medium land owners. The paper deals with the influence of fiscal incentives on the dynamics of the Brazilian reforestation programme, following with an analysis of the socioeconomic impacts of reforestation policies and finally commenting on the impacts of the Brazilian reforestation programme on the Amazon region.
Intersubband spin-density excitations in quantum wells with Rashba spin splitting
Creators: name: Ullrich, C. A.
name: Flatte, M. E.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: In inversion-asymmetric semiconductors, spin-orbit coupling induces a k-dependent spin splitting of valence and conduction bands, which is a well-known cause for spin decoherence in bulk and heterostructures. Manipulating nonequilibrium spin coherence in device applications thus requires understanding how valence and conduction band spin splitting affects carrier spin dynamics. This paper studies the relevance of this decoherence mechanism for collective intersubband spin-density excitations (SDEs) in quantum wells. A density-functional formalism for the linear spin-density matrix response is presented that describes SDEs in the conduction band of quantum wells with subbands that may be non-parabolic and spin-split due to bulk or structural inversion asymmetry (Rashba effect). As an example, we consider a 40 nm GaAs/AlGaAs quantum well, including Rashba spin splitting of the conduction subbands. We find a coupling and wavevector-dependent splitting of the longitudinal and transverse SDEs. However, decoherence of the SDEs is not determined by subband spin splitting, due to collective effects arising from dynamical exchange and correlation.
description: 10 pages, 4 figures
Additional file 3 of Exploring research capacity and culture of allied health professionals: a mixed methods evaluation
Creators: name: Cordrey, Terry
name: King, Elizabeth
name: Pilkington, Emma
name: Gore, Katie
name: Gustafson, Owen
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 3.
Modular Hybrid Plasmonic Integrated Circuit -- Rotation, Nanofocusing and Nonlinear Enhancement
Creators: name: Tuniz, Alessandro
name: Bickerton, Oliver
name: Diaz, Fernando J.
name: Käsebier, Thomas
name: Kley, Ernst-Bernhard
name: Kroker, Stefanie
name: Palomba, Stefano
name: de Sterke, C. Martijn
Publisher: name: arXiv
Year: 2019
Subjects: subject: Optics (physics.optics)
subject: Applied Physics (physics.app-ph)
subject: FOS: Physical sciences

description: We introduce a modular approach for efficiently interfacing photonic integrated circuits with deep-sub-wavelength hybrid plasmonic functionality. We demonstrate that an off-the-shelf silicon-on-insulator waveguide can be post-processed into an integrated hybrid plasmonic circuit by evaporating a silica and gold nanolayer. The circuit consists of a plasmonic rotator and a nanofocusser module, which together result in nano-scale, nonlinear wavelength conversion. We experimentally characterize each module, and demonstrate an intensity enhancement of $>200$ in a calculated mode area of $50\,{\rm nm}^2$ at $λ= 1320\,{\rm nm}$ using second harmonic generation. This work opens the door to customized plasmonic functionalities on industry-standard waveguides, bridging conventional integrated photonic circuits with hybrid plasmonic devices. This approach promises convenient access to nanometre-scale quantum information processing, nonlinear plasmonics, and single-molecule sensing.
Octothrips bhatti
Creators: name: Wang, Chin-Ling
Publisher: name: Zenodo
Year: 2008
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Thysanoptera
Thripidae
Octothrips
Octothrips bhatti

description: Octothrips bhatti (Wilson)
 Apollothrips bhatti Wilson, 1972: 52–54.
 Octothrips lygodii Mound, 2002: 219–220. new synonym.
 Female (macropterous): Body light brown, color of abdomen and antennae variable. Antennal segments light brown, III–IV uniformly light brown or with apical portion yellow. Forewing brown; all legs yellow. Abdominal tergites II–VIII with dark brown antecostal ridges, tergites all brown to median 1/3 brown but yellow laterally. Head and pronotum with dense sculpture, cheeks shorter than eyes; interocellar setae arise between front and hind ocelli. Pronotum with one pair of posteroangular setae, 4 pairs of inner posteromarginal setae. Mesonotum with dense sculpture; median pair of setae situated in front of submedian pairs. Metanotal sculpture of longitudinal reticles; median setae posterior to anterior margin; campaniform sensilla absent. Forewing first vein with 2 distal setae, second vein setal row complete. Abdominal tergites II–VIII with median and lateral sculpture, VIII without posterior marginal comb.
 Male: Similar to female; abdomen with 50–70 small pale circular glandular areas on sternites III–VII.
 Specimens examined: Taiwan, Hualien, 22 females, 2 males, on Nephrolepis, 22.ix.1993. Malaysia, Kuala Lumpur, University of Malaya, vii.2006, 2 females, 2 males from Lygodium, India, holotype female, allotype male of Apollothrips bhatti on Nephrolepis sp., 24.xi.1969.
 Remarks: This species is now known from China, Taiwan, Hong Kong, Singapore, Malaysia, Thailand, Indonesia, India and Japan. Bhatti (2003) used three characteristics in his key to separate bhattii and lygodii: shape and length of split on tergite X, body colour, and sternal glandular areas of males. However, among the specimens listed above no differences were found, either in tergite X or in the body colour. The glandular areas on the sternites of the male allotype of bhatti are difficult to see, but appear to be the same as in lygodii, and these two are therefore considered the same species.
description: Published as part of Wang, Chin-Ling, 2008, A new synonym and two new records for Taiwan of Thripidae related to Trichromothrips (Thysanoptera), pp. 67-68 in Zootaxa 1941 (1) on page 68, DOI: 10.11646/zootaxa.1941.1.6, http://zenodo.org/record/5231085
Supplementary figures and tables: Exploring surveillance data biases when estimating the reproduction number: with insights into subpopulation transmission of Covid-19 in England
Creators: name: Sherratt, Katharine
name: Abbott, Sam
name: Meakin, Sophie R.
name: Hellewell, Joel
name: Munday, James D.
name: Bosse, Nikos
name: CMMID Covid-19 Working Group
name: Jit, Mark
name: Funk, Sebastian
Publisher: name: The Royal Society
Year: 2021
Subjects: subject: Health Care
subject: Diseases
subject: 111706 Epidemiology
subject: FOS: Health sciences

description: Figures SI1, SI2, SI3; Tables SI1, SI2
Caridean shrimps of the Gulf of Mexico
Creators: name: Ugalde, Diana
name: Simões, Nuno
Publisher: name: Zenodo
Year: 2019
Subjects: Carideans
Carid shrimp
Biodiversity
Biodiversity Marine
Gulf of Mexico
Marine Biology
Taxonomy

description: This Infographic is a product of BDMY project (https://www.bdmy.org.mx), that was produced with funds of the Harte Research Institute for Gulf of Mexico Studies.
 The information in the infographic was reviewed and validated by a group of specialists in the taxon. CC-BY-NC-ND
Additional file 2 of Exploring research capacity and culture of allied health professionals: a mixed methods evaluation
Creators: name: Cordrey, Terry
name: King, Elizabeth
name: Pilkington, Emma
name: Gore, Katie
name: Gustafson, Owen
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 2.
Formation of close binaries by disc fragmentation and migration, and its statistical modeling
Creators: name: Tokovinin, Andrei
name: Moe, Maxwell
Publisher: name: arXiv
Year: 2019
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: Joint statistics of periods and mass ratios of close binaries and its dependence on primary mass can be explained by assuming that seed binary companions are formed by disc fragmentation at random intervals during assemblage of stellar mass and migrate inwards as they accrete from the circumbinary disk. A toy model based on simple prescriptions for the companion growth and migration reproduces such aspects of close solar-mass binaries as the distribution of binary periods P, the brown dwarf desert at short P, the nearly uniform distribution of mass ratios, and a population of equal-mass binaries (twins) that decreases linearly in frequency with logP. For massive stars, the model predicts a large fraction of early mergers, a distribution of logP with a negative slope, and a mass-ratio distribution that is also uniform but with a substantially reduced twin fraction. By treating disc fragmentation as a stochastic process, we also reproduce the observed properties of compact triples. Success of our toy model suggests that most close binaries and compact triples indeed formed by disc fragmentation followed by accretion-driven inward migration.
description: Accepted by MNRAS; 15 pages, 11 figures
Acridoschema capricorne Thomson 1858
Creators: name: Botero, Juan Pablo
name: Tavakilian, Gérard L.
name: Seidel, Matthias
name: Husemann, Martin
name: Simões, Marianna V. P.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Acridoschema
Acridoschema capricorne

description: Acridoschema favareli Le Moult, 1938
Figs 3–4
Acridoschema favareli Le Moult, 1938: 30.
Paratypes
GABON • 1 ex.; “ GABON / BAS-OGOOUÉ // COLLon LE MOULT / Naturaliste, Paris // COTYPE // Acridoschema / Favareli / Le Moult / P. Lepesme det. // Sammlung / P. Lepesme / Eing. Nr. 2, 1949 // ZMH 824657 ”; ZMH 824657 • 4 exs; “ GABON / BAS-OGOOUÉ // COLLon LE MOULT / Naturaliste, Paris // COTYPE // Sammlung / P. Lepesme / Eing. Nr. 2, 1949 // [ZMH 824658-824661]”; ZMH 824658 - 824661.
Type locality
Bas Ogooué, Gabon.
Current status
Junior synonym of Acridoschema capricorne Thomson, 1858.
Remarks
Although Le Moult (1938) only stated that the holotype is deposited in his collection (now at the IRSNB) and did not refer to paratypes, he gave a range of sizes in the original description, showing that there was more than one specimen (paratypes).
description: Published as part of Botero, Juan Pablo, Tavakilian, Gérard L., Seidel, Matthias, Husemann, Martin & Simões, Marianna V. P., 2023, An annotated type catalogue of the Cerambycidae (Insecta: Coleoptera) in the Zoological Museum Hamburg, pp. 1-50 in European Journal of Taxonomy 869 on pages 3-4, DOI: 10.5852/ejt.2023.869.2111, http://zenodo.org/record/7891755
Four-dimensional topological Einstein-Maxwell gravity
Creators: name: de Medeiros, P.
name: Spence, B.
Publisher: name: arXiv
Year: 2002
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Differential Geometry (math.DG)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: The complete on-shell action of topological Einstein-Maxwell gravity in four-dimensions is presented. It is shown explicitly how this theory for SU(2) holonomy manifolds arises from four-dimensional Euclidean N=2 supergravity. The twisted local BRST symmetries and twisted local Lorentz symmetries are given and the action and stress tensor are shown to be BRST-exact. A set of BRST-invariant topological operators is given. The vector and antisymmetric tensor twisted supersymmetries and their algebra are also found.
description: Published version. Expanded discussion of new results in the introduction and some clarifying remarks added in later sections. 22 pages, uses phyzzx
Additional file 1 of Exploring research capacity and culture of allied health professionals: a mixed methods evaluation
Creators: name: Cordrey, Terry
name: King, Elizabeth
name: Pilkington, Emma
name: Gore, Katie
name: Gustafson, Owen
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 1.
Great Impostors: Extremely Compact, Merging Binary Neutron Stars in the Mass Gap Posing as Binary Black Holes
Creators: name: Tsokaros, Antonios
name: Ruiz, Milton
name: Shapiro, Stuart L.
name: Sun, Lunan
name: Uryū, Kōji
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: Can one distinguish a binary black hole undergoing a merger from a binary neutron star if the individual compact companions have masses that fall inside the so-called mass gap of $3-5\ M_\odot$? For neutron stars, achieving such masses typically requires extreme compactness and in this work we present initial data and evolutions of binary neutron stars initially in quasiequilibrium circular orbits having a compactness $C=0.336$. These are the most compact, nonvacuum, quasiequilibrium binary objects that have been constructed and evolved to date, including boson stars. The compactness achieved is only slightly smaller than the maximum possible imposed by causality, $C_{\rm max}=0.355$, which requires the sound speed to be less than the speed of light. By comparing the emitted gravitational waveforms from the late inspiral to merger and postmerger phases between such a binary neutron star vs a binary black hole of the same total mass we identify concrete measurements that serve to distinguish them. With that level of compactness, the binary neutron stars exhibit no tidal disruption up until merger, whereupon a prompt collapse is initiated even before a common core forms. Within the accuracy of our simulations the black hole remnants from both binaries exhibit ringdown radiation that is not distinguishable from a perturbed Kerr spacetime. However, their inspiral leads to phase differences of the order of $\sim 5$ rad over an $\sim 81$ km separation (1.7 orbits) while typical neutron stars exhibit phase differences of $\geq 20$ rad. Although a difference of $\sim 5$ rad can be measured by current gravitational wave laser interferometers (e.g., aLIGO/Virgo), uncertainties in the individual masses and spins will likely prevent distinguishing such compact, massive neutron stars from black holes.
description: 8 pages, 9 figures. Matches published version
Echinoderms of the Gulf of Mexico
Creators: name: Ugalde, Diana
name: Simões, Nuno
Publisher: name: Zenodo
Year: 2019
Subjects: Echinoderms
Echinodermata
Biodiversity
Biodiversity Marine
Gulf of Mexico
Marine Biology
Taxonomy

description: This Infographic is a product of BDMY project (https://www.bdmy.org.mx), that was produced with funds of the Harte Research Institute for Gulf of Mexico Studies.
 The information in the infographic was reviewed and validated by a group of specialists in the taxon. CC-BY-NC-ND
Mollusks of the Gulf of Mexico
Creators: name: Ugalde, Diana
name: Simões, Nuno
Publisher: name: Zenodo
Year: 2019
Subjects: Mollusca
Mollusk
Biodiversity
Biodiversity Marine
Gulf of Mexico
Marine Biology
Taxonomy

description: This Infographic is a product of BDMY project (https://www.bdmy.org.mx), that was produced with funds of the Harte Research Institute for Gulf of Mexico Studies.
 The information in the infographic was reviewed and validated by a group of specialists in the taxon. CC-BY-NC-ND
Molecular systematics and taxonomic revision of the Curve-billed Scythebill complex (Campylorhamphus procurvoides: Dendrocolaptidae), with description of a new species from western Amazonian Brazil. In J. del Hoyo, A. Elliott, J. Sargatal & D. Christie (Eds), Handbook of the Birds of the World. Special Volume: New Species and Global Index, pp.253-257. Lynx Edicions, Barcelona.
Creators: name: Aleixo, Alexandre
name: Portes, Carlos Eduardo B.
name: Whittaker, Andrew
name: Weckstein, Jason D.
name: Gonzaga, Luiz Pedreira
name: Zimmer, Kevin J.
name: Ribas, Camila C.
name: Bates, John M.
Publisher: name: Zenodo
Year: 2013
Subjects: Campylorhamphus, new species, taxonomy

description: Description of Campylorhamphus gyldenstolpei with supporting information.
Effects of D-strain, g-strain, and dipolar interactions on EPR linewidths of the molecular magnets Fe8 and Mn12
Creators: name: Park, Kyungwha
name: Novotny, M. A.
name: Dalal, N. S.
name: Hill, S.
name: Rikvold, P. A.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Condensed Matter (cond-mat)
subject: FOS: Physical sciences

description: Electron paramagnetic resonance (EPR) measurements on single crystals of the molecular magnets Fe$_8$ and Mn$_{12}$ reveal complex nonlinearities in the linewidths as functions of energy eigenstate, frequency, and temperature. Using a density-matrix equation with distributions of the uniaxial anisotropy parameter $D$, the Landé $g$ factor, and dipolar interactions, we obtain linewidths in good agreement with experiments. Our study shows that the distribution in $D$ is common to the examined molecular magnets Fe$_8$ and Mn$_{12}$ regardless of the qualities of the samples. This could provide the basis for a proposed tunneling mechanism due to lattice defects. The distribution in $g$ is also quite significant for Mn$_{12}$.
description: revised version
Ites colasi Lepesme 1943
Creators: name: Botero, Juan Pablo
name: Tavakilian, Gérard L.
name: Seidel, Matthias
name: Husemann, Martin
name: Simões, Marianna V. P.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Ites
Ites colasi

description: Ites colasi Lepesme, 1943
Figs 1–2
Ites colasi Lepesme, 1943: 135.
Holotype FRENCH GUIANA • ♂; “ Guyane Fr. / Maroni / Coll. LeMoult // Ites Type / Colasi n.sp. / P. Lepesme det. // TYPE // Sammlung / P. Lepesme / Eing. Nr. 2, 1949 // ZMH 824639”; ZMH 824639.
Type locality
Guyane, Maroni [French Guiana].
Current status
Valid species.
description: Published as part of Botero, Juan Pablo, Tavakilian, Gérard L., Seidel, Matthias, Husemann, Martin & Simões, Marianna V. P., 2023, An annotated type catalogue of the Cerambycidae (Insecta: Coleoptera) in the Zoological Museum Hamburg, pp. 1-50 in European Journal of Taxonomy 869 on page 3, DOI: 10.5852/ejt.2023.869.2111, http://zenodo.org/record/7891755
On the perturbative expansion of the magnetization in the out-of-equilibrium Kondo model
Creators: name: Parcollet, O.
name: Hooley, C.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: This paper is concerned with the out-of-equilibrium two-lead Kondo model, considered as a model of a quantum dot in the Kondo regime. We revisit the perturbative expansion of the dot's magnetization, and conclude that, even at order 0 in the Kondo interactions, the magnetization is not given by the usual equilibrium result. We use the Schwinger-Keldysh method to derive a Dyson equation describing the steady state induced by the voltage between the two leads, and thus present the correct procedure for calculating perturbative expansions of steady-state properties of the system.
description: Minor corrections forgotten in v2
The Relativistic Geoid: Gravity Potential and Relativistic Effects
Creators: name: Philipp, Dennis
name: Hackmann, Eva
name: Lämmerzahl, Claus
name: Müller, Jürgen
Publisher: name: arXiv
Year: 2019
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: The Earth's geoid is one of the most essential and fundamental concepts to provide a gravity field-related height reference in geodesy and associated sciences. To keep up with the ever-increasing experimental capabilities and to consistently interpret high-precision measurements without any doubt, a relativistic treatment of geodetic notions (including the geoid) within Einstein's theory of General Relativity is inevitable. Building on the theoretical construction of isochronometric surfaces and the so-called redshift potential for clock comparison, we define a relativistic gravity potential as a generalization of (post-)Newtonian notions. This potential exists in any stationary configuration with rigidly co-rotating observers, and it is the same as realized by local plumb lines. In a second step, we employ the gravity potential to define the relativistic geoid in direct analogy to the Newtonian understanding. In the respective limit, the framework allows to recover well-known (post-) Newtonian results. For a better illustration and proper interpretation of the general relativistic gravity potential and geoid, some particular examples are considered. Explicit results are derived for exact vacuum solutions to Einstein's field equation as well as a parametrized post-Newtonian model. Comparing the Earth's Newtonian geoid to its relativistic generalization is a very subtle problem, but of high interest. An isometric embedding into Euclidean three-dimensional space is an appropriate solution and allows a genuinely intrinsic comparison. With this method, the leading-order differences are determined, which are at the mm-level.
description: final version, 16 pages, 5 figures, added journal reference
Natural language processing Mini Hack
Creators: name: Kurtin, Danielle Lauren
name: Yorguin Mantilla Ramos
name: González, Violeta Menéndez
name: Orasan, Constantin
name: Bălăeț, Maria
name: Roonak Rezvani
name: Villa, Eliana Salas
name: Zhaoying Yu
name: Mini Hack Consortium
Publisher: name: F1000 Research Limited
Year: 2022

description: These slides describe the content from a two-day workshop introducing Natural Language Processing (NLP) and how to conduct it on a given dataset. All materials and code for this workshop are accessible on this GitHub repository.
Doping dependence of the exchange energies in bilayer manganites: Role of orbital degrees of freedom
Creators: name: Jackeli, G.
name: Perkins, N. B.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: Recently, an intriguing doping dependence of the exchange energies in the bilayer manganites $La_{2-2x}Sr_{1+2x}Mn_2O_7$ has been observed in the neutron scattering experiments. The intra-layer exchange only weakly changed with doping while the inter-layer one drastically decreased. Here we propose a theory which accounts for these experimental findings. We argue, that the observed striking doping dependence of the exchange energies can be attributed to the evaluation of the orbital level splitting with doping. The latter is handled by the interplay between Jahn-Teller effect (supporting an axial orbital) and the orbital anisotropy of the electronic band in the bilayer structure (promoting an in-plane orbital), which is monitored by the Coulomb repulsion. The presented theory, while being a mean-field type, describes well the experimental data and also gives the estimates of the several interesting energy scales involved in the problem.
description: Added references, corrected typos. To appear in Phys. Rev. B
Resistivity anisotropy of quantum Hall stripe phases
Creators: name: Sammon, Michael
name: Fu, Xiaojun
name: Huang, Yi
name: Zudov, Michael A.
name: Shklovskii, Boris I.
name: Gardner, Geoff C.
name: Watson, John D.
name: Manfra, Michael J.
name: Baldwin, K. W.
name: Pfeiffer, Loren N.
name: West, K. W.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Quantum Hall stripe phases near half-integer filling factors $ν\ge 9/2$ were predicted by Hartree-Fock (HF) theory and confirmed by discoveries of giant resistance anisotropies in high-mobility two-dimensional electron gases. A theory of such anisotropy was proposed by MacDonald and Fisher, although they used parameters whose dependencies on the filling factor, electron density, and mobility remained unspecified. Here, we fill this void by calculating the hard-to-easy resistivity ratio as a function of these three variables. Quantitative comparison with experiment yields very good agreement which we view as evidence for the "plain vanilla" smectic stripe HF phases.
Spin-polarized quasiparticle transport in cuprate superconductors
Creators: name: Fu, C. -C.
name: Huang, Z.
name: Yeh, N. -C.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: The effects of spin-polarized quasiparticle transport in superconducting YBa2Cu3O_{7-δ} (YBCO) epitaxial films are investigated by means of current injection into perovskite ferromagnet-insulator-superconductor (F-I-S) heterostructures. These effects are compared with the injection of simple quasiparticles into control samples of perovskite non-magnetic metal-insulator-superconductor (N-I-S). Systematic studies of the critical current density as a function of the injection current density, temperature and the thickness of the superconductor reveal drastic differences between the F-I-S and N-I-S heterostructures, with strong suppression of the critical currents and a rapidly increasing characteristic transport length near the superconducting transition temperature only in the F-I-S samples. The temperature dependence of the injection efficiency in the F-I-S samples is also in sharp contrast to that in the N-I-S samples. The characteristic times estimated from our studies are suggestive of anisotropic spin relaxation processes, possibly with spin-orbit interaction dominating the c-axis spin transport and exchange interaction prevailing within the CuO2 planes. Several alternative scenarios attempted to account for the suppression of critical currents in F-I-S samples are also critically examined, and are found to be neither compatible with experimental data nor with the established theory of nonequilibrium superconductivity.
description: 14 pages, 6 figures. Published in Physical Review B. Corresponding author: Nai-Chang Yeh (e-mail: ncyeh@caltech.edu)
Chemical evolution of ultra-faint dwarf galaxies: testing the IGIMF
Creators: name: Lacchin, E.
name: Matteucci, F.
name: Vincenzo, F.
name: Palla, M.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We test the integrated galactic initial mass function (IGIMF) on the chemical evolution of 16 ultra-faint dwarf (UFD) galaxies discussing in detail the results obtained for three of them: Boötes I, Boötes II and Canes Venatici I, taken as prototypes of the smallest and the largest UFDs. These objects have very small stellar masses ($\sim 10^3-10^4 \mathrm{M_{\odot}}$) and quite low metallicities ([Fe/H]$
description: Accepted for publication in MNRAS
Additional file 1 of Fe-curcumin nanozyme-mediated immunosuppression and anti-inflammation in experimental autoimmune uveitis
Creators: name: Jiang, Zhengxuan
name: Liang, Kun
name: Gao, Xiang
name: Cao, Fan
name: An, Guangqi
name: Gui, Siyu
name: Tang, Weiwei
name: Du, Liping
name: Tao, Liming
name: Wang, Xianwen
Publisher: name: figshare
Year: 2023
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Neuroscience
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer

description: Additional file 1: Figure S1. The stability of Fe-curcumin in different condition. (a) Fe-curcumin nanozyme dispersed in water. (b) Fe-curcumin nanozyme dispersed in ethanol. (c) The first day of Fe-curcumin nanozyme dispersed in solution with different pH. (d) The third day of Fe-curcumin nanozyme dispersed in solution with different pH. Figure S2. Like-bioenzyme activity of Nanozymes. (a-b) SOD enzyme activity of Fe-curcumin nanozyme. (c-d) SOD enzyme activity of four common NPs. (e) GPX enzyme activity of four common NPs. Figure S3. Cell differentiation in patients with EAU treated with or without Fe-curcumin nanozyme. Figure S4. Chemical reaction equations for the radical scavenging process. Figure S5. Effective of several NPs in reducing ROS
Investigation of the PES microfiltration membrane fouling characteristics for five substances
Creators: name: Wang, Yufei
name: Zhang, Xuanxuan
name: Lv, Kai
name: Zhuo, Ming
name: Han, Yu
name: Lu, Yin
Publisher: name: Taylor & Francis
Year: 2019
Subjects: subject: Biophysics
subject: Biochemistry
subject: Space Science
subject: Physical Sciences not elsewhere classified
subject: Microbiology
subject: FOS: Biological sciences
subject: Chemical Sciences not elsewhere classified
subject: Marine Biology
subject: Plant Biology

description: This article proposes two new concepts, adsorption and rejection accumulation and the membrane fouling efficiency per unit accumulation to quantitatively characterize the membrane fouling capacity of different single substances. The membrane fouling caused by bovine serum albumin (BSA), sucrose, glycerol triacetate, l-glutathione and maltodextrin on a polyethersulfone (PES) microfiltration membrane was studied. The real-time variations in filtrate concentration and transmembrane pressure were measured with an ultraviolet (UV) detector and pressure sensor during constant-flux filtration. The results showed that the PES membrane had rejection effects for the five substances. However, adsorption phenomena on the PES membrane were observed only for BSA and l-glutathione filtration. The membrane fouling capacity depended on the accumulation and fouling coefficient of the fouling component. The adsorption and rejection accumulation over 40 min followed the order of BSA (1441.39 µg·cm−2) > sucrose (908.53 µg·cm−2) > glycerol triacetate (290.29 µg·cm−2) > l-glutathione (145.18 µg·cm−2), while the membrane fouling efficiency per unit accumulation followed the order of l-glutathione (6.06 × 108 m−1·µg−1·cm2)>BSA (2.44 × 108 m−1·µg−1·cm2) > glycerol triacetate (2.08 × 108 m−1·µg−1·cm2) > sucrose (8.41 × 107m−1·µg−1·cm2). Based on these two factors, the membrane fouling was the most severe with BSA, followed by sucrose, l-glutathione and glycerol triacetate. The membrane fouling caused by maltodextrin was severe in the early stage and weakened in the later period due to the periodic formation and collapse of the maltodextrin cake layer on the membrane surface.
Caperonotus Napp 1993
Creators: name: Napp, Dilma Solange
name: Monné, Miguel A.
Publisher: name: Zenodo
Year: 2008
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Caperonotus

description: Key to the species of Caperonotus
 1. Elytra entirely black without metallic reflections (Fig. 1). Brazil (Pará) ................. C. tucurui new species
- Elytra bicolored, orangish and metallic bluish-green to violaceus (Figs 2, 3)............................................2
 2. Pronotum (Fig. 5) plicate and punctate. Sides of prothorax and prosternum densely punctorugose. Elytra opaque, with contiguous, uniform punctures on the entire surface. Apical segments of maxillary and labial palps conical. (Fig. 2) Peru, Brazil (Amazonas) ................................................ C. cardinalis (Bates, 1870)
 - Pronotum (Fig. 6) entirely plicate without punctures. Sides of prothorax and prosternum finely, shallowly plicate. Elytra shining, with coarse punctures in the orangish area of the integument and very fine, shallow, sparse punctures in the metallic. Apical segments of maxillary and labial palps cylindrical. (Fig. 3) Peru, Brasil (Amazonas) ............................................................................ C. superbus (Aurivillius, 1897)
description: Published as part of Napp, Dilma Solange & Monné, Miguel A., 2008, Synopsis of the genus Caperonotus Napp, 1993 (Coleoptera: Cerambycidae), pp. 25-30 in Zootaxa 1941 (1) on page 26, DOI: 10.11646/zootaxa.1941.1.2, http://zenodo.org/record/5231045
Givosiran: A Review in Acute Hepatic Porphyria
Creators: name: Yahiya Y. Syed
Publisher: name: Adis Journals
Year: 2021
Subjects: Medicine

description: Declarations Funding The preparation of this review was not supported by any external funding. Authorship and Conflict of interest Yahiya Y. Syed is a salaried employee of Adis International Ltd/Springer Nature, and declares no relevant conflicts of interest. All authors contributed to the review and are responsible for the article content. Ethics approval, Consent to participate, Consent to publish, Availability of data and material, Code availability not applicable Additional information about this Adis Drug Review can be found here Abstract Givosiran ( Givlaari®) is an δ-aminolevulinic acid synthase 1 (ALAS1)-directed small interfering RNA (siRNA) approved for the treatment of acute hepatic porphyria (AHP). In the phase 3 ENVISION trial, givosiran significantly reduced the annualized rate of composite porphyria attacks (i.e. attacks requiring hospitalization, urgent healthcare visit or intravenous hemin administration at home) compared with placebo in patients with recurrent acute intermittent porphyria (the most common type of AHP) attacks. Givosiran also improved several other outcomes, including hemin use and pain (the cardinal symptom of AHP). While generally well tolerated with an acceptable safety profile, the drug may increase the risk of hepatic and kidney adverse events. Givosiran offers the convenience of once-monthly subcutaneous administration. Available evidence indicates that givosiran is an important newer therapeutic option for patients with AHP and severe recurrent attacks.
 © Springer Nature Switzerland AG 2021
Tensor-based algorithms for image classification
Creators: name: Klus, Stefan
name: Gelß, Patrick
Publisher: name: arXiv
Year: 2019
Subjects: subject: Machine Learning (cs.LG)
subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: The interest in machine learning with tensor networks has been growing rapidly in recent years. We show that tensor-based methods developed for learning the governing equations of dynamical systems from data can, in the same way, be used for supervised learning problems and propose two novel approaches for image classification. One is a kernel-based reformulation of the previously introduced MANDy (multidimensional approximation of nonlinear dynamics), the other an alternating ridge regression in the tensor-train format. We apply both methods to the MNIST and fashion MNIST data set and show that the approaches are competitive with state-of-the-art neural network-based classifiers.
Additional file 11 of Activity-based protein profiling reveals dynamic substrate-specific cellulase secretion by saprotrophic basidiomycetes
Creators: name: McGregor, Nicholas G. S.
name: de Boer, Casper
name: Santos, Mikhaaeel
name: Haon, Mireille
name: Navarro, David
name: Schroder, Sybrin
name: Berrin, Jean-Guy
name: Overkleeft, Herman S.
name: Davies, Gideon J.
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Plant Biology
subject: Computational Biology

description: Additional file 11. Supplementary synthetic methods, figures, and tables.
Extension of weakly and strongly F-regular rings by flat maps
Creators: name: Aberbach, Ian M.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Commutative Algebra (math.AC)
subject: FOS: Mathematics
subject: 13A35

description: Let (R,m) -> (S,n) be a flat local homomorphism of excellent local rings. We investigate the conditions under which the weak or strong F-regularity of R passes to S. We show that is suffices that the closed fiber S/mS be Gorenstein and either F-finite (if R and S have a common test element), or F-rational (otherwise).
Interplay of Excitonic Complexes in $p$-Doped WSe$_2$ Monolayers
Creators: name: Borghardt, Sven
name: Tu, Jhih-Sian
name: Taniguchi, Takashi
name: Watanabe, Kenji
name: Kardynal, Beata E.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: WSe$_2$ monolayers with variable doping are an ideal system to study two-dimensional excitonic complexes. Here, we find that the strongest photoluminescence from bright neutral excitons occurs at moderate $p$-doping levels, owing to a rapid decrease of signal from positive dark trions and a slow increase of signal from positive bright trions with growing $p$-concentrations. We explain our observations with a qualitative model, in which the scattering rate of bright excitons into dark complexes is enhanced by exciton localization, while the scattering rate into positive bright trions increases with $p$-doping level.
description: 6 pages (main text), 5 pages (supplementary information)
Representation in rehabilitation research of adults with traumatic brain injury and depression: A scoping review
Creators: name: Adora Chui
name: Seaton, Samantha
name: Kirsh, Bonnie
name: Dawson, Deirdre R.
name: Colquhoun, Heather
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: Medicine
subject: Immunology
subject: FOS: Clinical medicine
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Objective: To determine how well comorbid depression is described, defined, and measured in the rehabilitation literature that pertains to TBI and depression. Method: Scoping review of the rehabilitation sciences literature. Six databases were searched (to October 17, 2018) using the three core concepts of TBI, depression, and rehabilitation, as was for gray literature. Two independent reviewers reviewed documents for eligibility. Results: 3737 records were reviewed and 137 documents were analyzed. Primary studies (n = 126) were most prevalent and of quantitative descriptive design (n = 102). The number of participants with TBI and comorbid depression could only be determined for 81/126 (64%) of primary studies, in which they are the minority (median of 30% of sample). Depression reporting was heterogeneous and individuals with TBI and depression were not analyzed as a subgroup in most studies (n = 68, 55%). Depression self-report instruments are commonly used (14 instruments used in 111 studies). Few studies (n = 14, 19%) have participant samples with discrete severity levels of TBI and depression. Conclusions: Better participant representation and reporting of TBI and depression variables are needed to enhance comparability across studies and improve rehabilitation outcomes
Zographus regalis subsp. regalis
Creators: name: Botero, Juan Pablo
name: Tavakilian, Gérard L.
name: Seidel, Matthias
name: Husemann, Martin
name: Simões, Marianna V. P.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Zographus
Zographus regalis
Zographus regalis regalis (brown, 1776)

description: Zographus regalis dyoti Le Moult, 1939
Figs 13–14
Zoographus regalis dyoti Le Moult, 1939: 93.
Possible paratypes
IVORY COAST • 23 exs; “ Dimbroko / Cote d’Ivoire // Sammlung / P. Lepesme / Eing. Nr. 2, 1949 // [ZMH 843084-843106]”; ZMH 843084-843106.
Type locality
Dimbroko (Ivory Coast).
Current status
Synonym of Zographus regalis regalis (Brown, 1776).
Remarks
The 23 specimens listed above possess handwritten labels from Dimbroko and were mixed with the other specimens of Zographus regalis names described by Le Moult, thus they may or may not be paratypes of Zographus regalis dyoti Le Moult, 1939.
description: Published as part of Botero, Juan Pablo, Tavakilian, Gérard L., Seidel, Matthias, Husemann, Martin & Simões, Marianna V. P., 2023, An annotated type catalogue of the Cerambycidae (Insecta: Coleoptera) in the Zoological Museum Hamburg, pp. 1-50 in European Journal of Taxonomy 869 on page 9, DOI: 10.5852/ejt.2023.869.2111, http://zenodo.org/record/7891755
The correspondence between environmental similarity and geographical sympatry in Uromastyx species
Creators: name: Kechnebbou, Marwa
name: Lobo, Jorge M.
name: Chammem, Mohsen
Publisher: name: Brill Online
Year: 2019
Subjects: subject: 60299 Ecology not elsewhere classified
subject: FOS: Biological sciences

description: Estimating the realized and potential distribution of species has become a very active field of research with capacity to propose likely speciation mechanisms. Here, environmental variables and point locality data derived from several sources were used to examine the concordance between geographical distributions and environmental niches derived from occurrences for eleven species of the genus Uromastyx (Reptilia, Agamidae). Our results indicate that the degree of geographical overlap is definitively and statistically lower than the degree of environmental similarity. This reinforces the hypothesis that speciation process within the genus Uromastyx will be mainly based on geographical isolation. However, the environmental divergence among some groups of species cannot be excluded; high environmental distances can be obtained for some related species and the environmental gradient represented by two unique climatic variables allows discriminating some species among which an ecological or environmental segregation would be a plausible explanation.
Additional file 2 of An enhanced participant information leaflet and multimedia intervention to improve the quality of informed consent to a randomised clinical trial enrolling people living with HIV and obesity: a protocol for a Study Within A Trial (SWAT)
Creators: name: O’Sullivan, Lydia
name: Savinelli, Stefano
name: O’Hare, Stephen
name: Holden, Sinéad
name: McHugh, Ciara
name: Mallon, Patrick
name: Doran, Peter
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Science Policy

description: Additional file 2. Enhanced PIL/ICF for the SWIFT Trial.
Interaction of an electron gas with photoexcited electron-hole pairs in modulation-doped GaAs and CdTe quantum wells
Creators: name: Nickel, H. A.
name: Yeo, T.
name: Meining, C. J.
name: Yakovlev, D. R.
name: Furis, M.
name: Dzyubenko, A. B.
name: McCombe, B. D.
name: Petrou, A.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Condensed Matter (cond-mat)
subject: FOS: Physical sciences

description: The nature of the correlated electron gas and its response to photo-injected electron-hole pairs in nominally undoped and modulation-doped multiple quantum-well (MQW) structures was studied by experiment and theory, revealing a new type of optically-active excitation, magnetoplasmons bound to a mobile valence hole. These excitations are blue-shifted from the corresponding transition of the isolated charged magnetoexciton X-. The observed blue-shift of X- is larger than that of two-electron negative donor D-, in agreement with theoretical predictions.
description: 4 pages, 3 figures, EP2DS-14 manuscript, to be published in Physica E
TABIIY FANLAR INTEGRATSIYASI ASOSIDA TABIIY (SCIENCE),BIOLOGIYA, GEOGRAFIYA DARSLARIDA  BARKAMOL AVLODGA ZAMONAVIY METODLARDAN FOYDALANISH
Creators: name: Sharopova, M.
name: Yusufjonova, Navbahor
Publisher: name: Zenodo
Year: 2025

description: Bugungi kunda ilm-fan, texnika, texnologiya va ishlab chiqarish sohalarining tez sur’atlarda jadallik bilan rivojlanib borayotganligi ta’lim muassasalarida ta’lim-tarbiya sifatini oshirishga asos bo’lgan talablarni qayta ko’rib chiqib, o’qitishning zamonaviy usul va vositalarini amaliyotga joriy etishni talab etmoqda.