cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Amphinemura dispositspina Du & Wang, sp. nov.
Creators: name: Du, Yu-Zhou
name: Wang, Zhi-Jie
Publisher: name: Zenodo
Year: 2007
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Plecoptera
Nemouridae
Amphinemura
Amphinemura dispositspina

description: Amphinemura dispositspina Du & Wang, sp. nov.
(Figs. 9–15)
Adult habitus. Head brown, antennae pale brown; head wider than pronotum, pronotum brown, trapezoidal, corners blunt rounded, midline distinct; wings hyaline, veins pale brown; legs pale brown.
Male. Forewing length 6.0– 6.8 mm, hind wing length 5.2–5.7 mm. Tergum 9 lightly sclerotized, except along posterior margin where it is well sclerotized, several long, pale brown spines located on the raised posterior margin. Tergum 10 lightly sclerotized, a membranous area presented near middle of anterior margin, a rhombic, flat, sclerotized plate below the epiproct. Hypoproct broad at base, tapering to a bluntly rounded apex that covers inner lobes of paraprocts; vesicle length 3X width. Paraprocts divided into 3 lobes, inner lobe sclerotized and bifurcate at tip; median lobe with wide pale sclerotized base, narrowed from middle part, curved upwards and forming right angle from the lateral view, armed with long hairs on the surface of basal part, and a row of regular long spines located around inner side of the apex and several long spines on the outer side; outer lobe slender, its thin base darkly sclerotized, tip expanded, 3–4 rows of denticles arranged on ventral surface. Epiproct narrow at base, widest in basal ¼, then tapering to a notched, laterally concave apex; dorsal sclerite lightly sclerotized, widest at middle and expanded ventrally, the latter most distinct in lateral view, tapering with a notch at tip; lateral arms darkly sclerotized; ventral sclerite reaching over apex of the dorsal sclerite, and with a notch at tip, a bulge present at 1/3 distance from apex with small, blunt denticles ventrally.
Female. Unknown.
Type material. Holotype male, CHINA: Futian village, Eryuan county, Yunnan province, 24 May 1996, Leg. Du Yu–Zhou. Paratype 1 m, same data as the holotype.
Etymology. The name refers to a row of long, regular spines arranged on the inner side of the apex of the median lobes of paraprocts. The Latin dispositio meaning arrangement and spina meaning thorn.
Remarks. This new species is similar to Amphinemura nepalensis Harper, 1975 in having several long spines on the median lobe of the paraproct and rows of denticles on the outer lobe of the paraproct. In our new species, the ventral sclerite forms a bulge at 1/3 the distance from the apex with small, blunt denticles ventrally, In A. nepalensis, the ventral sclerite of epiproct has a slender, protruding, darkly sclerotized projection, and several small spines surrounding the apical portion of the projection.
13 14 15
description: Published as part of Du, Yu-Zhou & Wang, Zhi-Jie, 2007, New species of the genus Amphinemura (Plecoptera: Nemouridae) from Yunnan, China, pp. 57-62 in Zootaxa 1554 on pages 58-59, DOI: 10.5281/zenodo.178182
Criticality-Based Quantum Metrology in the Presence of Decoherence
Creators: name: He, Wan-Ting
name: Lu, Cong-Wei
name: Yao, Yi-Xuan
name: Zhu, Hai-Yuan
name: Ai, Qing
Publisher: name: arXiv
Year: 2022
Subjects: subject: Quantum Physics (quant-ph)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Quantum metrology aims to use quantum resources to improve the precision of measurement. Quantum criticality has been presented as a novel and efficient resource. Generally, protocols of criticality-based quantum metrology often work without decoherence. In this paper, we address the issue whether the divergent feature of the inverted variance is indeed realizable in the presence of noise when approaching the QPT. Taking the quantum Rabi model (QRM) as an example, we obtain the analytical result for the inverted variance. We show that the inverted variance may be convergent in time due to the noise. When approaching the critical point, the maximum inverted variance demonstrates a power-law increase with the exponent -1.2, of which the absolute value is smaller than that for the noise-free case, i.e., 2. We also observe a power-law dependence of the maximum inverted variance on the relaxation rate and the temperature. Since the precision of the metrology is very sensitive to the noise, as a remedy, we propose performing the squeezing operation on the initial state to improve the precision under decoherence. In addition, we also investigate the criticality-based metrology under the influence of the two-photon relaxation. Contrary to the single-photon relaxation, the quantum dynamics of the inverted variance shows a completely-different behavior. It does not oscillate with the same frequency with respect to the re-scaled time for different dimensionless coupling strengths. Strikingly, although the maximum inverted variance still manifests a power-law dependence on the energy gap, the exponent is positive and depends on the dimensionless coupling strength. This observation implies that the criticality may not enhance but weaken the precision in the presence of two-photon relaxation. It can be well described by the non-linearity introduced by the two-photon relaxation.
description: 6 pages, 5 figures
Additional file 1: of The role of income and occupation in the association of education with healthy aging: results from a population-based, prospective cohort study
Creators: name: White, Christine
name: John, Philip St.
name: Cheverie, Madelon
name: Iraniparast, Maryam
name: Tyas, Suzanne
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Derivation of analytic sample, Manitoba Study of Health and Aging. (DOCX 44 kb)
Optimal classification and generalized prevalence estimates for diagnostic settings with more than two classes
Creators: name: Luke, Rayanne A.
name: Kearsley, Anthony J.
name: Patrone, Paul N.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Quantitative Methods (q-bio.QM)
subject: Optimization and Control (math.OC)
subject: Probability (math.PR)
subject: Biological Physics (physics.bio-ph)
subject: Methodology (stat.ME)
subject: FOS: Biological sciences
subject: FOS: Mathematics
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: An accurate multiclass classification strategy is crucial to interpreting antibody tests. However, traditional methods based on confidence intervals or receiver operating characteristics lack clear extensions to settings with more than two classes. We address this problem by developing a multiclass classification based on probabilistic modeling and optimal decision theory that minimizes the convex combination of false classification rates. The classification process is challenging when the relative fraction of the population in each class, or generalized prevalence, is unknown. Thus, we also develop a method for estimating the generalized prevalence of test data that is independent of classification. We validate our approach on serological data with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) naïve, previously infected, and vaccinated classes. Synthetic data are used to demonstrate that (i) prevalence estimates are unbiased and converge to true values and (ii) our procedure applies to arbitrary measurement dimensions. In contrast to the binary problem, the multiclass setting offers wide-reaching utility as the most general framework and provides new insight into prevalence estimation best practices.
description: 28 pages, 8 figures, 4 tables, 4 supplemental figures
Additional file 1: of Effect of probiotic chewing tablets on early childhood caries â   a randomized controlled trial
Creators: name: Trifa Hedayati-Hajikand
name: Lundberg, Ulrika
name: Eldh, Catarina
name: Twetman, Svante
Publisher: name: Figshare
Year: 2015
Subjects: Developmental Biology
Science Policy

description: CONSORT 2010 checklist of information to include when reporting a randomised trial. (DOC 217 kb)
BOUBAKER, Sadok y Clara Ilham ÁLVAREZ DOPICO, eds. (2012). Empreintes espagnoles dans l’histoire tunisienne. Gijón: Ediciones Trea, 234 p.
Creators: name: Vincent, Bernard
Publisher: name: Dirāsāt Hispānicas. Revista Tunecina de Estudios Hispánicos
Year: 2014

description: Reseña bibliográfica.
description: Dirāsāt Hispānicas. Revista Tunecina de Estudios Hispánicos, No. 1 (2014)
Amphinemura hamatmicroda Du & Wang, sp. nov.
Creators: name: Du, Yu-Zhou
name: Wang, Zhi-Jie
Publisher: name: Zenodo
Year: 2007
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Plecoptera
Nemouridae
Amphinemura
Amphinemura hamatmicroda

description: Amphinemura hamatmicroda Du & Wang, sp. nov.
(Figs. 16–22)
Adult habitus. Head brown, antennae pale brown; head wider than pronotum, pronotum brown; wings hyaline, veins brown; legs pale brown.
Male. Forewing length 6.2 mm, hind wing length 5.4 mm. Tergum 9 lightly sclerotized, except at its concaved posterior margin where it is darkly sclerotized, a row of long, pale brown spines located on the raised posterior margin. Tergum 10 lightly sclerotized, membranous near middle of anterior margin, a wide sclerotized plate present under the apex of the epiproct with 5-8 scattered denticles, a second sclerotized, rhombic plate under the epiproct. Hypoproct broad at base, tapering to a bluntly rounded apex, covering most of inner lobes of paraprocts; vesicle length 3X width. Paraprocts divided into 3 lobes, inner lobe most darkly sclerotized apicomedially; median lobe with long hairs on the wide, lightly sclerotized base, narrowed at middle part, forming a large, hooked membranous bar that curves ventrolaterally, a line of denticles densely arranged on the outer margin of the bar, the basal part of the bar bulging toward the contrary direction, membranous; outer lobe sclerotized, slender and long, with a rounded apex. Epiproct length 4X width in dorsal aspect, tapering to a notched apex; dorsal sclerite lightly sclerotized, tapering to narrowed apex; lateral arms darkly sclerotized; ventral sclerite extends over dorsal sclerite, forming a long, thin bar, a row of blunt denticle located on median of ventral surface.
20 21 22 of denticles located on it outer margin. The Latin hamatus and microdus meaning hook–shaped and denticle, respectively.
Remarks. This new species is similar to Amphinemura forcipiloba Wu, 1962 in having a thin, long epiproct, but the median paraproct lobe of the new species has a large, hook-shaped membranous bar curving ventrolaterally and armed with a line of denticles on the outer margin of the bar. In A. forcipiloba, the median lobe lacks the hook-shaped projection.
description: Published as part of Du, Yu-Zhou & Wang, Zhi-Jie, 2007, New species of the genus Amphinemura (Plecoptera: Nemouridae) from Yunnan, China, pp. 57-62 in Zootaxa 1554 on pages 60-61, DOI: 10.5281/zenodo.178182
Nozzle Shocks, Disk Tearing and Streamers Drive Rapid Accretion in 3D GRMHD Simulations of Warped Thin Disks
Creators: name: Kaaz, Nicholas
name: Liska, Matthew T. P.
name: Jacquemin-Ide, Jonatan
name: Andalman, Zachary L.
name: Musoke, Gibwa
name: Tchekhovskoy, Alexander
name: Porth, Oliver
Publisher: name: arXiv
Year: 2022
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: The angular momentum of gas feeding a black hole (BH) is typically misaligned with respect to the BH spin, resulting in a tilted accretion disk. Rotation of the BH drags the surrounding space-time, manifesting as Lense-Thirring torques that lead to disk precession and warping. We study these processes by simulating a thin ($H/r=0.02$), highly tilted ($\mathcal{T}=65^\circ$) accretion disk around a rapidly rotating ($a=0.9375$) BH at extremely high resolutions, which we performed using the general-relativistic magnetohydrodynamic (GRMHD) code H-AMR. The disk becomes significantly warped and continuously tears into two individually precessing sub-disks. We find that mass accretion rates far exceed the standard $α$-viscosity expectations. We identify two novel dissipation mechanisms specific to warped disks that are the main drivers of accretion, distinct from the local turbulent stresses that are usually thought to drive accretion. In particular, we identify extreme scale height oscillations that occur twice an orbit throughout our disk. When the scale height compresses, `nozzle' shocks form, dissipating orbital energy and driving accretion. Separate from this phenomenon, there is also extreme dissipation at the location of the tear. This leads to the formation of low-angular momentum `streamers' that rain down onto the inner sub-disk, shocking it. The addition of low angular momentum gas to the inner sub-disk causes it to rapidly accrete, even when it is transiently aligned with the BH spin and thus unwarped. These mechanisms, if general, significantly modify the standard accretion paradigm. Additionally, they may drive structural changes on much shorter timescales than expected in $α$-disks, potentially explaining some of the extreme variability observed in active galactic nuclei.
description: 17 pages, 10 figures. Published in ApJ
Additional file 2: Figure S1. of Multiplexed, targeted profiling of single-cell proteomes and transcriptomes in a single reaction
Creators: name: Genshaft, Alex
name: Shuqiang Li
name: Gallant, Caroline
name: Darmanis, Spyros
name: Prakadan, Sanjay
name: Ziegler, Carly
name: Lundberg, Martin
name: Fredriksson, Simon
name: Hong, Joyce
name: Regev, Aviv
name: Livak, Kenneth
name: Landegren, Ulf
name: Shalek, Alex
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Standard protein probe curves using recombinant proteins. Two-fold dilutions of recombinant proteins were backloaded into the C1 IFC and processed according to the PEA/STA protocol. Shown here are the PEA measurements, with the y-axis values representing â  Ct values from only lysis buffer. Gray (green) dashes show the level above which the probability for a detection event being real is pâ  =â  0.01 (0.05). Each data point plotted is the average of eight separate capture sites in the C1 IFC with error bars showing the standard error of the mean. Points used for fitting the red trend line are colored blue. Most probes evaluated with recombinants worked well (a) with the exception of CSF3R_P and TP53_P (b), whose lack of detection was also seen in the protein lysate dilutions (Additional file 3: Figure S2). (PDF 315 kb)
DE EPALZA FERRER, Míkel y Abdel Hakim SLAMA GAFSI (2010). El español hablado en Túnez por los moriscos o andalusíes y sus descendientes (siglos XVII-XVIII). Valencia: Publicacions de la Universitat de València, 672 p.
Creators: name: Constán Nava, Antonio
Publisher: name: Dirāsāt Hispānicas. Revista Tunecina de Estudios Hispánicos
Year: 2014

description: Reseña bibliográfica.
description: Dirāsāt Hispānicas. Revista Tunecina de Estudios Hispánicos, No. 1 (2014)
Amphinemura latifollicula Du & Wang, sp. nov.
Creators: name: Du, Yu-Zhou
name: Wang, Zhi-Jie
Publisher: name: Zenodo
Year: 2007
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Plecoptera
Nemouridae
Amphinemura
Amphinemura latifollicula

description: Amphinemura latifollicula Du & Wang, sp. nov.
(Figs. 23–29)
Adult habitus. Head and antennae pale brown; head wider than pronotum, pronotum brown, paler than head with darker rugosities; wings hyaline, veins brown; legs brown.
Male. Forewing length 7.5 mm, hind wing length 6.3 mm. Tergum 9 lightly sclerotized and constricted medially with a line of long spines along the posterior margin. Tergum 10 lightly sclerotized, a rounded membranous concavity present below the epiproct, with few denticles scattered anterolaterally, anterior margin forming a short sclerotized bar. Hypoproct broad at base, tapering to a bluntly rounded apex that partially covers the inner lobes of paraprocts; vesicle length 4X width. Paraprocts divided into 3 lobes, inner lobe heavily sclerotized along midline; median lobe lightly sclerotized, narrowed at middle and curved dorsally, forming an elongate, rounded, membranous apex with four strong spines and several other smaller spines located at or near the apex; outer lobe sclerotized, with two large, strong black spines at tip. Epiproct sclerotized and enlarged apicolaterally, dorsal sclerite lightly sclerotized, with a notch at tip; lateral arms darkly sclerotized, a pair of lateral projections extending from lateral arms, pointed posterolaterally, each with several small, blunt denticles apically; ventral sclerite broad at base, reaching over the tip of dorsal sclerite, forming a long, enlarged keel with a row of black spines ventrally.
26 29
27 28
Female. Unknown.
Type material. Holotype male, CHINA: Gongshan, Gaoli village, Baoshan city, Yunnan province, 19 Sep. 2006, Leg. Wang Xing–Min.
Etymology. The name refers to a pair of vesicle–shaped projections extending from the lateral arms of the epiproct. The Latin latus means broad or wide, while follicula is a small purse.
Remarks. This new species is similar to Amphinemura ovalis Li & Yang 2005, but the new species has two vesicle–shaped projections extending from the end of the lateral arms, while in A. ocalis, the epiproct is elongate with the dorsal sclerite having two slender, darkly sclerotized, lateral bands. Additionally, the new species has two large, strong black spines located on the outer lobe of the paraproct, while in A. ocalis the outer lobe of the paraproct has a subapical, black spine and a pointed tip.
description: Published as part of Du, Yu-Zhou & Wang, Zhi-Jie, 2007, New species of the genus Amphinemura (Plecoptera: Nemouridae) from Yunnan, China, pp. 57-62 in Zootaxa 1554 on pages 61-62, DOI: 10.5281/zenodo.178182
Hunting for quantum-classical crossover in condensed matter problems
Creators: name: Yoshioka, Nobuyuki
name: Okubo, Tsuyoshi
name: Suzuki, Yasunari
name: Koizumi, Yuki
name: Mizukami, Wataru
Publisher: name: arXiv
Year: 2022
Subjects: subject: Quantum Physics (quant-ph)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: The intensive pursuit for quantum advantage in terms of computational complexity has further led to a modernized crucial question: {\it When and how will quantum computers outperform classical computers?} The next milestone is undoubtedly the realization of quantum acceleration in practical problems. Here we provide a clear evidence and arguments that the primary target is likely to be condensed matter physics. Our primary contributions are summarized as follows: 1) Proposal of systematic error/runtime analysis on state-of-the-art classical algorithm based on tensor networks; 2) Dedicated and high-resolution analysis on quantum resource performed at the level of executable logical instructions; 3) Clarification of quantum-classical crosspoint for ground-state simulation to be within runtime of hours using only a few hundreds of thousand physical qubits for 2d Heisenberg and 2d Fermi-Hubbard models, assuming that logical qubits are encoded via the surface code with the physical error rate of $p=10^{-3}$. To our knowledge, we argue that condensed matter problems offer the earliest platform for demonstration of practical quantum advantage that is order-of-magnitude more feasible than ever known candidates, in terms of both qubit counts and total runtime.
description: 14+41 pages, 8+24 figures
Additional file 3: of The role of income and occupation in the association of education with healthy aging: results from a population-based, prospective cohort study
Creators: name: White, Christine
name: John, Philip St.
name: Cheverie, Madelon
name: Iraniparast, Maryam
name: Tyas, Suzanne
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Characteristics of study population at baseline by healthy aging status at baseline, Manitoba Study of Health and Aging (n=896). (DOCX 19 kb)
Borniochrysa Brooks & Barnard 1990
Creators: name: Wang, Maozhi
name: Lai, Yan
name: Liu, Xingyue
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Neuroptera
Chrysopidae
Borniochrysa

description: Genus Borniochrysa Brooks & Barnard, 1990
Borniochrysa Brooks & Barnard, 1990: 192.
Type species: Bornia winkleri Navás, 1928: 123, by monotypy.
Bornia Navás, 1928: 123 (homonym of Bornia Philippi, 1836: 13); Banks, 1931: 381 (as synonym of Chrysopa Leach, 1815); Kuwayama, 1962: 372 (as synonym of Anomalochrysa McLachlan, 1883).
Diagnosis. (Adapted from Brooks & Barnard 1990; Breitkreuz 2018). Adult medium-sized (forewing 10–15 mm); body color generally pale green; antenna slightly shorter than forewing, each flagellomere with four rings of setae; scape yellow or with brownish stripe. Pronotum unmarked or with median yellow longitudinal stripe; meso- and metanotum unmarked or with brown or black stripe along sutures between prescutum, scutum, and scutellum. Legs unmarked or with black stripe on tibia; setae short, black; claws brown. Forewing unmarked or with brown suffusions on crossveins; pterostigma unmarked or with brown spots; Sc and R widely separated; im broad, ovate; two or three series of gradates present. Hindwing with two series of gradates. Male genitalia: sternites 8+9 fused, elongate; ectoprocts distally curved dorsad, bearing a few stout setae at tip; tignum, gonapsis and parameres absent; gonarcus narrow, long, with dorsolateral horns; entoprocessus forked; pseudopenis absent; gonosetae long or short. Female genitalia: Praegenitale absent; subgenitale broad; spermatheca broad, duct long, sinuous.
Distribution. Afrotropical region (widespread); Australian region (Solomon Islands); Oriental region (China (new record), Indonesia, Malaysia, the Philippines).
description: Published as part of Wang, Maozhi, Lai, Yan & Liu, Xingyue, 2022, New record of Borniochrysa Brooks & Barnard, 1990 (Neuroptera: Chrysopidae) from China, with description of two new species, pp. 478-488 in Zootaxa 5222 (5) on pages 479-480, DOI: 10.11646/zootaxa.5222.5.6, http://zenodo.org/record/7471929
Additional file 15: Figure S14. of Multiplexed, targeted profiling of single-cell proteomes and transcriptomes in a single reaction
Creators: name: Genshaft, Alex
name: Shuqiang Li
name: Gallant, Caroline
name: Darmanis, Spyros
name: Prakadan, Sanjay
name: Ziegler, Carly
name: Lundberg, Martin
name: Fredriksson, Simon
name: Hong, Joyce
name: Regev, Aviv
name: Livak, Kenneth
name: Landegren, Ulf
name: Shalek, Alex
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: In silico gating of samples by both discrete and continuous methods. a, b Heatmaps show protein or RNA targets (rows) significantly dysregulated when applying protein or RNA expression gates (columns). Cooler colors indicate a decrease in expressing cells by a Fisher’s exact test (a) or the distribution of expressing cells by a Mann–Whitney U test (b) while warmer colors indicate the inverse. c, d In addition to discrete gating, unsupervised analyses, such as a PCA over protein (c) or RNA levels (d), can also be annotated by additional cellular observations (RNA or protein data, respectively). c ESR1_R expression shows a strong Spearman's ρ of 0.60 with PC2 on a PCA computed from the protein expression. d AXIN1_P expression shows a strong negative ρ of −0.68 with PC1 on a PCA computed over RNA expression. (PDF 964 kb)
Additional file 2: of The role of income and occupation in the association of education with healthy aging: results from a population-based, prospective cohort study
Creators: name: White, Christine
name: John, Philip St.
name: Cheverie, Madelon
name: Iraniparast, Maryam
name: Tyas, Suzanne
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Characteristics of study population at baseline by healthy aging status at follow-up, Manitoba Study of Health and Aging (n=1,751). (DOCX 38 kb)
Use of alcohol among Year 10 students
Creators: name: White, Joanna
Publisher: name: Health New Zealand
Year: 2024
Subjects: classificationCode: 420603
subject: Health promotion

description: In New Zealand, a third of people who have ever tried alcohol report having had their first drink when they were 14-years-old or younger. It is, therefore, important to understand more about the use of alcohol among this age group. The Health Promotion Agency’s Youth Insights Survey (YIS) monitors Year 10 students’ behaviours, attitudes, and knowledge on a range of health-related topics, including their use of alcohol.
Additional file 3: Figure S2. of Multiplexed, targeted profiling of single-cell proteomes and transcriptomes in a single reaction
Creators: name: Genshaft, Alex
name: Shuqiang Li
name: Gallant, Caroline
name: Darmanis, Spyros
name: Prakadan, Sanjay
name: Ziegler, Carly
name: Lundberg, Martin
name: Fredriksson, Simon
name: Hong, Joyce
name: Regev, Aviv
name: Livak, Kenneth
name: Landegren, Ulf
name: Shalek, Alex
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Standard protein probe curves using lysed and diluted MCF7 cells. Two-fold dilutions of population lysate were backloaded into the C1 IFC and processed according to the PEA/STA protocol. Shown here are the PEA measurements with the y-axis values representing ∆Ct, which are calculated as the signal over a lysis buffer only control. Certain assays (e.g. EIF4EBP1_P) display a “hook” effect. The effect occurs when the concentration of a target protein exceeds a threshold beyond which PEA probes begin to occupy separate target molecules as opposed to the same one. This results in a reduction of signal due to a reduction in the number of proximal events. Each data point plotted is the average of eight separate capture sites in the C1 IFC with error bars showing the standard error of the mean. Gray (green) dashes show the level above which the probability for a detection event being real is p = 0.01 (0.05). Points used for fitting the red trend line are colored blue, the background plot color indicates which treatment cells were taken from (0 hr = purple, 24 hr = green, 48 hr = blue). Probes are categorized as (a) usable or (b) unusable. (PDF 557 kb)
Additional file 3: of Genomic epidemiology of Lineage 4 Mycobacterium tuberculosis subpopulations in New York City and New Jersey, 1999â  2009
Creators: name: Brown, Tyler
name: Apurva Narechania
name: Walker, John
name: Planet, Paul
name: Bifani, Pablo
name: Sergios-Orestis Kolokotronis
name: Kreiswirth, Barry
name: Barun Mathema
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Table S2. Statistically significant dN/dS values, estimated by gene and across phylogenetic branches. P HOLM, Holm-corrected P-value. Location of Nodes Aâ  E are indicated in Fig.Â 1. (DOCX 19 kb)
Federated Multi-Agent Deep Reinforcement Learning Approach via Physics-Informed Reward for Multi-Microgrid Energy Management
Creators: name: Li, Yuanzheng
name: He, Shangyang
name: Li, Yang
name: Shi, Yang
name: Zeng, Zhigang
Publisher: name: arXiv
Year: 2023
Subjects: subject: Systems and Control (eess.SY)
subject: Machine Learning (cs.LG)
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: FOS: Computer and information sciences

description: The utilization of large-scale distributed renewable energy promotes the development of the multi-microgrid (MMG), which raises the need of developing an effective energy management method to minimize economic costs and keep self energy-sufficiency. The multi-agent deep reinforcement learning (MADRL) has been widely used for the energy management problem because of its real-time scheduling ability. However, its training requires massive energy operation data of microgrids (MGs), while gathering these data from different MGs would threaten their privacy and data security. Therefore, this paper tackles this practical yet challenging issue by proposing a federated multi-agent deep reinforcement learning (F-MADRL) algorithm via the physics-informed reward. In this algorithm, the federated learning (FL) mechanism is introduced to train the F-MADRL algorithm thus ensures the privacy and the security of data. In addition, a decentralized MMG model is built, and the energy of each participated MG is managed by an agent, which aims to minimize economic costs and keep self energy-sufficiency according to the physics-informed reward. At first, MGs individually execute the self-training based on local energy operation data to train their local agent models. Then, these local models are periodically uploaded to a server and their parameters are aggregated to build a global agent, which will be broadcasted to MGs and replace their local agents. In this way, the experience of each MG agent can be shared and the energy operation data is not explicitly transmitted, thus protecting the privacy and ensuring data security. Finally, experiments are conducted on Oak Ridge national laboratory distributed energy control communication lab microgrid (ORNL-MG) test system, and the comparisons are carried out to verify the effectiveness of introducing the FL mechanism and the outperformance of our proposed F-MADRL.
description: Accepted by IEEE Transactions on Neural Networks and Learning Systems
FAIR WISH D12: Summary on the Potential of IGSNs  and User Requirements in the Domains of Earth System Science and beyond  (AWI, GFZ)
Creators: name: Wieczorek, Mareike
name: Heim, Birgit
name: Baldewein, Linda
name: Brauser, Alexander
name: Elger, Kirsten
Publisher: name: Zenodo
Year: 2023
Subjects: PID
IGSN
International Generic Sample Number
User feedback
FAIR SAMPLES Template
interoperability
metadata
Helmholtz Metadata Collaboration
HMC

description: This document contains deliverable D12 Summary on the Potential of IGSNs and User Requirements in the Domains of Earth System Science and beyond of the project FAIR Workflows to establish IGSN for Samples in the Helmholtz Association (FAIR WISH) funded by the Helmholtz Metadata Collaboration (HMC). The aim of this document is to provide background, perspectives and lessons learned during FAIR WISH on the potential, opportunities, and challenges of introducing the International Generic Sample Number (IGSN, www.igsn.org) to physical samples of the domains of Earth System Science and beyond, specifically targeting the research field Earth and Environment of the German Helmholtz Centres.

FAIR WISH is a joint project between the Helmholtz Centres GFZ, AWI and Hereon. It was was funded 2022-2023 by the Initiative and Networking Fund of the Helmholtz Association within the HMC Project Cohorte 2020 of the Helmholtz Metadata Collaboration Platform HMC.
Polypedilum (Tripodura) nudiprostatum Zhang, Wang & Saether
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum nudiprostatum

description: Polypedilum (Tripodura) nudiprostatum Zhang, Wang & Saether
Polypedilum (Tripodura) nudiprostatum Zhang, Wang & Saether, 2006: 43.
Material examined. Holotype male (BDN No.01560), CHINA: Guangxi Autonomous Region, Longsheng County, Sanmen Town, 26. V. 1990, light trap, X. Wang. Paratype: 1 male, Fujian Province, Jianning County, the forestry bureau of county town, 26. IX. 2002, Z. Liu, light trap.
Diagnostic characters. The species differs from other species of Tripodura in the shape of the straight superior volsella and the trifid anal point with long bare lateral projection.
Key characters of male imago. Total length 1.89 mm, wing length 1.08–1.24 mm. AR 0.58–0.59. Clypeus with 13–14 setae. Wing with 4 markings, 1 at base of cell r4+5, 1 at base of cell m1+2, 1 in cell m3+4 basal and extending to cell cu1 distal, 1 in the middle of cell an. R with 12–14 setae; R1 with 8–9; R4+5 with 14–15. Squama with 5–6 setae. Dorsocentrals 13–16; acrostichals 11–14; prealars 3–4. Scutellum with 9–10 setae. Terminal scale of front tibia with small spur, fore leg ratio 1.88.
Anal tergite bands not fused basal, with 2–3 median setae. Anal point broad and 63–68 µm long; lateral projection without microtrichiae, strongly sclerited and slightly spatulated at apex. Superior volsella 52–60 µm long, with 2 strong diageotropic inner setae at 1/4 apex and 1 outer sub-apical seta; 11–13 slender setae present at apical 1/4. Inferior volsella 65–72 µm long, with 7 oral setae and an apical seta. HR 0.78–0.91. HV 2.01.
Distribution. The superior volsella of the present species without apical extension is unusual in the genus Polypedilum; relevant discussions on the variation of superior volsella with the genus Polypedilum consult Bidawid & Fittkau (1995) and Zhang et al. (2006). The lateral projections of the anal point are narrow, parallelsided, strongly sclerotized and without setae, i.e. different from nearly all other known species in the subgenus with trifid anal point.
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 26, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Additional file 6: of The role of income and occupation in the association of education with healthy aging: results from a population-based, prospective cohort study
Creators: name: White, Christine
name: John, Philip St.
name: Cheverie, Madelon
name: Iraniparast, Maryam
name: Tyas, Suzanne
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: The association of healthy aging at follow-up with baseline education, household income, perceived Income adequacy, life satisfaction with finances and occupational prestige, Manitoba Study of Health and Aging (n=946). (DOCX 36 kb)
Additional file 2: of Genomic epidemiology of Lineage 4 Mycobacterium tuberculosis subpopulations in New York City and New Jersey, 1999â  2009
Creators: name: Brown, Tyler
name: Apurva Narechania
name: Walker, John
name: Planet, Paul
name: Bifani, Pablo
name: Sergios-Orestis Kolokotronis
name: Kreiswirth, Barry
name: Barun Mathema
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Pharmacology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Figure S1. Whole-genome maximum likelihood phylogenetic reconstruction of Mycobacterium tuberculosis isolates from North America, Sub-Saharan Africa, and Asia (nâ  =â  71). Values at the nodes indicate branch support based on 1000 bootstrap replicates. Letter labels denote branches with genes under purifying selection (see Additional file 1: Table S1) or lineage-defining polymorphisms. Green boxes in the adjoining matrix indicate SNPs at drug resistance-associated codon sites in known drug resistance gene. INH: isonaizid; RIF: rifampin; PZA: pyrazinamide; ETH: ethionamide; EMB: ethambutol; AMI: amikacin; FLQ: fluoroquinolones; PAS: para-aminosalicylic acid; SM: streptomycin. (PDF 210 kb)
Sketch In, Sketch Out: Accelerating both Learning and Inference for Structured Prediction with Kernels
Creators: name: Ahmad, Tamim El
name: Brogat-Motte, Luc
name: Laforgue, Pierre
name: d'Alché-Buc, Florence
Publisher: name: arXiv
Year: 2023
Subjects: subject: Machine Learning (stat.ML)
subject: Machine Learning (cs.LG)
subject: FOS: Computer and information sciences

description: Leveraging the kernel trick in both the input and output spaces, surrogate kernel methods are a flexible and theoretically grounded solution to structured output prediction. If they provide state-of-the-art performance on complex data sets of moderate size (e.g., in chemoinformatics), these approaches however fail to scale. We propose to equip surrogate kernel methods with sketching-based approximations, applied to both the input and output feature maps. We prove excess risk bounds on the original structured prediction problem, showing how to attain close-to-optimal rates with a reduced sketch size that depends on the eigendecay of the input/output covariance operators. From a computational perspective, we show that the two approximations have distinct but complementary impacts: sketching the input kernel mostly reduces training time, while sketching the output kernel decreases the inference time. Empirically, our approach is shown to scale, achieving state-of-the-art performance on benchmark data sets where non-sketched methods are intractable.
Additional file 8: Figure S7. of Multiplexed, targeted profiling of single-cell proteomes and transcriptomes in a single reaction
Creators: name: Genshaft, Alex
name: Shuqiang Li
name: Gallant, Caroline
name: Darmanis, Spyros
name: Prakadan, Sanjay
name: Ziegler, Carly
name: Lundberg, Martin
name: Fredriksson, Simon
name: Hong, Joyce
name: Regev, Aviv
name: Livak, Kenneth
name: Landegren, Ulf
name: Shalek, Alex
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Plant Biology

description: Standard RNA probe curves using ERCC Spike-Ins. Two-fold dilutions of ERCC Spike-Ins were backloaded into the C1 IFC and processed according to the PEA/STA protocol. Shown here are the STA measurements with the y-axis values representing â  Ct values from only lysis buffer or a threshold value of 24 if undetected in lysis buffer alone. Plots are ordered by decreasing concentration in the ERCC mix with bad fits arising around ERCC 14 (which corresponds to ~121 molecules loaded into the top dilution, Additional file 1: Table S10 and S11). Each data point plotted is the average of eight separate capture sites in the C1 IFC with error bars showing the standard error of the mean. Gray (green) dashes show the level above which the probability for a detection event being real is pâ  =â  0.01 (0.05). Points used for fitting the red trend line are colored blue. (PDF 1135 kb)
Additional file 1: Table S1. of Genomic epidemiology of Lineage 4 Mycobacterium tuberculosis subpopulations in New York City and New Jersey, 1999â  2009
Creators: name: Brown, Tyler
name: Apurva Narechania
name: Walker, John
name: Planet, Paul
name: Bifani, Pablo
name: Sergios-Orestis Kolokotronis
name: Kreiswirth, Barry
name: Barun Mathema
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Complete list of non-synonymous and synonymous synapomorphic polymorphisms for all L4 isolates, L4 isolates from New York City and New Jersey, and isolates from the S75 outbreak cluster. (DOCX 19 kb)
FAIR WISH "FAIR SAMPLES Template"
Creators: name: Wieczorek, Mareike
name: Brauser, Alexander
name: Frenzel, Simone
name: Heim, Birgit
name: Baldewein, Linda
name: Kleeberg, Ulrike
name: Elger, Kirsten
Publisher: name: Zenodo
Year: 2023
Subjects: FAIR Samples
IGSN
International Generic Sample Number
Helmholtz Metadata Collaboration (HMC)
sample description
template

description: This template presents the suggested IGSN metadata elements for sample descriptions of different sample types relevant in the context of the FAIR WISH project and shall serve as the basis for batch uploading sample-metadata to the IGSN server (FAIR SAMPLES TEMPLATE). The modular template was developed as an all-in-one solution for the varying use cases, with the ability for users to select only the variables needed for their specific sample type. This template can serve for the description of individual samples and for hierarchical sample structures later during the project (i.e. vegetation plot > soil pit > soil horizon > soil sample).

The FAIR SAMPLES TEMPLATE was developed as Microsoft Excel spreadsheet and will be the source for semi-automated generation of standardised XML files required for the IGSN registration and IGSN landing pages. The development strategy of the template was explicitly followed to meet the practice of researchers who mainly organise their sample descriptions in tables. Furthermore, as often information for 100 and more samples are to be registered, submitting information via bulk uploads is favoured compared to submitting information for each sample individually via a webform. We develop the template for Excel, as this is widely used in the community. It will further be possible to work with the template with Open Source programs, like Libre Office or organise the information as ASCII csv files.

The FAIR SAMPLES TEMPLATE includes a “Guide” which describes all available fields and additionally enables the selection of those variables which are necessary to describe one’s sample data. For this deliverable, we provide the full metadata schema, including the metadata fields and (sub)properties required for the IGSN registration schema (that will be provided by the allocating agent) and metadata fields that can be derived automatically and do not need to be provided by the users (e.g. the ROR identifier that will be included via an API). In addition, we adjusted the field names for the user template [column "Variable (Column name)" in the “Guide”] so that they are understandable by researchers and more intuitive than the original metadata field names in the IGSN metadata schema.

The template will be updated on a regular basis.

Version history:

(10 January 2023) publication of the first version 1.0

(30 April 2023) metadata update: change of title and exchange of first and second authors
The unique professional contribution and tax compliance
Creators: name: Benazzou Lotfi
name: Maach Rime
name: Mesrar Rida
Publisher: name: Zenodo
Year: 2024

description: Taxation in Morocco is crucially important to the economic and social governance, playing a vital role in financing public services. The introduction of the unique professional contribution (UPC) in 2021 marked a significant change, replacing the flat-rate profit system. This reform aimed to simplify the collection of taxes and social security contributions for activities generating modest incomes.

The reform aimed to consolidate various tax and social security obligations into a single contribution, encouraging tax compliance. Although UPC has brought benefits such as increased transparency and simplified tax procedures, initial challenges have been encountered, including difficult initial adjustments for some taxpayers and operational challenges related to the management of complementary rights.
Borniochrysa Brooks & Barnard 1990
Creators: name: Wang, Maozhi
name: Lai, Yan
name: Liu, Xingyue
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Neuroptera
Chrysopidae
Borniochrysa

description: Key to species of Borniochrysa
1. Two gradates series of crossveins in forewing............................................................... 2
- Three gradates series of crossveins in forewing.............................................................. 3
2. Brownish stripe present at base of forewing................................................... B. appendiculata
- Brownish stripe at base of forewing absent........................................................ B. squamosa
3. Genal spot ventrad eye absent................................................................... B. luzonica
- Genal spot ventrad eye present........................................................................... 4
4. Gradate veins in forewing pale........................................................................... 5
- Gradate veins in forewing brown......................................................................... 6
5. Each side of scape with red stripe; maxillary, labial palpi yellowish..................................... B. winkleri
- Scape yellowish, unmarked; labial, maxillary palpi brownish black (Fig. 3C, D)................... B. zhenxiana sp. nov.
6. Subcostal part of pterostigma with brown spots; pronotum laterally with a pair of black stripes............... B. solomonis
- Subcostal part of pterostigma pale; pronotum laterally with a pair of reddish brown stripes (Fig. 1C, D) B. kamayaria sp. nov.
description: Published as part of Wang, Maozhi, Lai, Yan & Liu, Xingyue, 2022, New record of Borniochrysa Brooks & Barnard, 1990 (Neuroptera: Chrysopidae) from China, with description of two new species, pp. 478-488 in Zootaxa 5222 (5) on page 486, DOI: 10.11646/zootaxa.5222.5.6, http://zenodo.org/record/7471929