cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 2 of Expression and clinical prognostic value of m6A RNA methylation modification in breast cancer
Creators: name: Zheng, Fangchao
name: Du, Feng
name: Qian, Haili
name: Zhao, Jiuda
name: Wang, Xue
name: Yue, Jian
name: Hu, Nanlin
name: Si, Yiran
name: Xu, Binghe
name: Yuan, Peng
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 2: Supplementary figure 2. The relationship between 28 m6A regulators and CNV of breast cancer. CNV: Copy Number Variation. (a-q) we listed 16 genes of 28 enrolled m6A regulators. M6A: N6-methyladenosine.
"Assisted cloning'' and "orthogonal-complementing" of an unknown state
Creators: name: Pati, Arun Kumar
Publisher: name: arXiv
Year: 1999
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We propose a protocol where one can exploit dual quantum and classical channels to achieve perfect ``cloning'' and ``orthogonal-complementing'' of an unknown state with a minimal assistance from a state preparer (without revealing what the input state is). The first stage of the protocol requires usual teleportation and in the second stage, the preparer disentangles the left-over entangled states by a single particle measurement process and communicates a number of classical bits (1-cbit per copy) to different parties so that perfect copies and complement copies are produced. We discuss our protocol for producing two copies and three copies (and complement copies) using two and four particle entangled state and suggest how to generalise this for N copies and complement copies using multiparticle entangled state.
description: 7 pages, Latex, no figures, submitted to Phys. Rev. A. 1999(to be accepted)
Comprehensive comparison of models for spectral energy distributions from 0.1 micron to 1 mm of nearby star-forming galaxies
Creators: name: Hunt, L. K.
name: De Looze, I.
name: Boquien, M.
name: Nikutta, R.
name: Rossi, A.
name: Bianchi, S.
name: Dale, D. A.
name: Granato, G. L.
name: Kennicutt, R. C.
name: Silva, L.
name: Ciesla, L.
name: Relano, M.
name: Viaene, S.
name: Brandl, B.
name: Calzetti, D.
name: Croxall, K. V.
name: Draine, B. T.
name: Galametz, M.
name: Gordon, K. D.
name: Groves, B. A.
name: Helou, G.
name: Herrera-Camus, R.
name: Hinz, J. L.
name: Koda, J.
name: Salim, S.
name: Sandstrom, K. M.
name: Smith, J. D.
name: Wilson, C. D.
name: Zibetti, S.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We have fit the far-ultraviolet (FUV) to sub-millimeter (850 micron) spectral energy distributions (SEDs) of the 61 galaxies from the "Key Insights on Nearby Galaxies: A Far-Infrared Survey with Herschel" (KINGFISH). The fitting has been performed using three models: the Code for Investigating GALaxy Evolution (CIGALE), the GRAphite-SILicate approach (GRASIL), and the Multi-wavelength Analysis of Galaxy PHYSical properties (MAGPHYS). We have analyzed the results of the three codes in terms of the SED shapes, and by comparing the derived quantities with simple "recipes" for stellar mass (Mstar), star-formation rate (SFR), dust mass (Mdust), and monochromatic luminosities. Although the algorithms rely on different assumptions for star-formation history, dust attenuation and dust reprocessing, they all well approximate the observed SEDs and are in generally good agreement for the associated quantities. However, the three codes show very different behavior in the mid-infrared regime, in particular between 25 and 70 micron where there are no observational constraints for the KINGFISH sample. We find that different algorithms give discordant SFR estimates for galaxies with low specific SFR, and that the standard "recipes" for calculating FUV absorption overestimate the extinction compared to the SED-fitting results. Results also suggest that assuming a "standard" constant stellar mass-to-light ratio overestimates Mstar relative to the SED fitting, and we provide new SED-based formulations for estimating Mstar from WISE W1 (3.4 micron) luminosities and colors. From a Principal Component Analysis of Mstar, SFR, Mdust, and O/H, we reproduce previous scaling relations among Mstar, SFR, and O/H, and find that Mdust can be predicted to within roughly 0.3 dex using only Mstar and SFR.
description: 42 pages, 23 figures, 8 tables, 2 appendices: updated to v2, A&A, accepted
Complementarity and the uncertainty relations
Creators: name: Bjork, Gunnar
name: Soderholm, Jonas
name: Trifonov, Alexei
name: Tsegaye, Tedros
name: Karlsson, Anders
Publisher: name: arXiv
Year: 1999
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We formulate a general complementarity relation starting from any Hermitian operator with discrete non-degenerate eigenvalues. We then elucidate the relationship between quantum complementarity and the Heisenberg-Robertson's uncertainty relation. We show that they are intimately connected. Finally we exemplify the general theory with some specific suggested experiments.
description: 9 pages, 4 figures, REVTeX, uses epsf.sty and multicol.sty
Neutrosophic Linear Fractional Programming Problems
Creators: name: Abdel-Nasser Hussian
name: Mohamed, Mai
name: Abdel-Baset, Mohamed
name: Yongquan Zhou
name: Smarandache, Florentin
Publisher: name: figshare
Year: 2018
Subjects: Algebra

description: In this chapter, a solution procedure is proposed to solveneutrosophic linear fractional programming (NLFP) problem where cost of the objective function, the resources and the technological coefficients are triangular neutrosophic numbers.
Deterministic creation and braiding of chiral edge vortices
Creators: name: Beenakker, C. W. J.
name: Baireuther, P.
name: Herasymenko, Y.
name: Adagideli, I.
name: Wang, Lin
name: Akhmerov, A. R.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Majorana zero-modes in a superconductor are midgap states localized in the core of a vortex or bound to the end of a nanowire. They are anyons with non-Abelian braiding statistics, but when they are immobile one cannot demonstrate this by exchanging them in real space and indirect methods are needed. As a real-space alternative, we propose to use the chiral motion along the boundary of the superconductor to braid a mobile vortex in the edge channel with an immobile vortex in the bulk. The measurement scheme is fully electrical and deterministic: edge vortices ($π$-phase domain walls) are created on demand by a voltage pulse at a Josephson junction and the braiding with a Majorana zero-mode in the bulk is detected by the charge produced upon their fusion at a second Josephson junction.
description: 9 pages, 9 figures
NEUTROSOPHIC NANO IDEAL TOPOLOGICAL STRUCTURES
Creators: name: M. Parimala
name: M. Karthika
name: S. Jafari
name: F. Smarandache
name: R. Udhayakumar
Publisher: name: figshare
Year: 2018
Subjects: Algebra

description: Neutrosophic nano topology and Nano ideal topological spaces induced the authors to propose this new concept. The aim of this paper is to introduce a new type of structural space called neutrosophic nano ideal topological spaces and investigate the relation between neutrosophic nano topological space and neutrosophic nano ideal topological spaces.
A Diagnostic Procedure For High-Dimensional Data Streams Via Missed Discovery Rate Control
Creators: name: Li, Wendong
name: Xiang, Dongdong
name: Tsung, Fugee
name: Pu, Xiaolong
Publisher: name: Taylor & Francis
Year: 2019
Subjects: Cell Biology
Neuroscience
Biotechnology
Chemical Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified

description: Monitoring complex systems involving high-dimensional data streams provides quick real-time detection of abnormal changes of system performance but accurate and efficient diagnosis of the streams responsible has also become increasingly important in many data-rich statistical process control (SPC) applications. Existing diagnostic procedures, designed for low/moderate dimensional multivariate process, may miss too much important information in the out-of-control (OC) streams with a high signal-to-noise ratio (SNR) or waste too many resources finding useless in-control (IC) streams with a low SNR. In addition, these procedures do not differentiate between streams according to their severity. In this article, we formulate the diagnosis problem of high-dimensional data streams as a multiple testing problem and provide a computationally fast diagnostic procedure to control the weighted missed discovery rate (wMDR) at some satisfactory level. The proposed procedure overcomes the limitations of conventional diagnostic procedures by controlling the wMDR and minimizing the expected number of false positives (EFP) as well. We show theoretically that the proposed procedure is asymptotically valid and optimal in a certain sense. Simulation studies and a real data analysis from a semi-conductor manufacturing process show that the proposed procedure works very well in practice.
Managing limb pain using virtual reality: a systematic review of clinical and experimental studies
Creators: name: Wittkopf, Priscilla G.
name: Lloyd, Donna M.
name: Johnson, Mark I.
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Purpose: The aim of this systematic review was to assess the effect of virtual representation of body parts on pain perception in patients with pain and in pain-free participants exposed to experimentally induced pain. Methods: Databases searched: Medline, PsycInfo, CINAHL, and Web of Science. Studies investigating participants with clinical pain or those who were pain free and exposed to experimentally induced pain were analysed separately. Results: Eighteen clinical studies and seven experimental studies were included. Randomised controlled clinical trials showed no significant difference between intervention and control groups for pain intensity. Clinical studies with a single group pretest–posttest design showed a reduction in pain after intervention. In the studies including a sample of pain free participants exposed to experimentally induced pain there was an increase in pain threshold when the virtual arm was collocated with the real arm, when it moved in synchrony with the real arm, and when the colour of the stimulated part of the virtual arm became blue. Observing a virtual arm covered with iron armour reduced pain. Conclusions: The use of virtual representations of body parts to reduce pain is promising. However, due to the poor methodological quality and limitations of primary studies, we could not find conclusive evidence.Implications for rehabilitationVirtual reality has been increasingly used in the rehabilitation of painful and dysfunctional limbs.Virtual reality can be used to distract attention away from acute pain and may also provide corrective psychological and physiological environments.Virtual representation of body parts has been used to provide a corrective re-embodiment of painful dysmorphic body parts, and primary research shows promising results. Virtual reality has been increasingly used in the rehabilitation of painful and dysfunctional limbs. Virtual reality can be used to distract attention away from acute pain and may also provide corrective psychological and physiological environments. Virtual representation of body parts has been used to provide a corrective re-embodiment of painful dysmorphic body parts, and primary research shows promising results.
Additional file 1 of Early prediction of moderate-to-severe condition of inhalation-induced acute respiratory distress syndrome via interpretable machine learning
Creators: name: Wu, Junwei
name: Liu, Chao
name: Xie, Lixin
name: Li, Xiang
name: Xiao, Kun
name: Xie, Guotong
name: Xie, Fei
Publisher: name: figshare
Year: 2022
Subjects: Biochemistry
Cell Biology
Biological Sciences not elsewhere classified
Science Policy
Hematology

description: Additional file 1.Reporting items for observational research checklist - the STROBE Statement.
Additional file 2 of Early prediction of moderate-to-severe condition of inhalation-induced acute respiratory distress syndrome via interpretable machine learning
Creators: name: Wu, Junwei
name: Liu, Chao
name: Xie, Lixin
name: Li, Xiang
name: Xiao, Kun
name: Xie, Guotong
name: Xie, Fei
Publisher: name: figshare
Year: 2022
Subjects: Biochemistry
Cell Biology
Biological Sciences not elsewhere classified
Science Policy
Hematology

description: Additional file 2. Prediction performances.
Time change for flows and thermodynamic formalism
Creators: name: Cipriano, Italo
name: Iommi, Godofredo
Publisher: name: arXiv
Year: 2018
Subjects: subject: Dynamical Systems (math.DS)
subject: FOS: Mathematics

description: This paper is devoted to study how do thermodynamic formalism quantities varies for time changes of suspension flows defined over countable Markov shifts. We prove that in general no quantity is preserved. We also make a topological description of the space of suspension flows according to certain thermodynamic quantities. For example, we show that the set of suspension flows defined over the full shift on a countable alphabet having finite entropy is open. Of independent interest might be a set of analytic tools we use to construct examples with prescribed thermodynamic behaviour.
Additional file 8 of The apheresis platelet donation was increased after a nationwide ban on family/replacement donation in China
Creators: name: Chen, Jinyan
name: Zhou, Guoli
name: Fu, Xuemei
name: Li, Shijie
name: Li, Ying
name: Kang, Jianxun
name: Chen, Huiyou
name: Zhou, Liqiao
name: Fu, Yongshui
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology

description: Additional file 8. Examinations of the assumptions – normality and homoscedasticity of errors for the final mixed effects models derived from overall GZ (panels A and B) and CD (panels C and D) pseudo-panel datasets. Panels A and C present marginal Pearson residual plots, which are for the consideration of fixed effects only. Panels B and D visualize conditional Pearson residual plots, which are for the consideration of both fixed and random effects. The plot residuals vs. predicted outcome mean is used for examining the homoscedasticity assumption whereas the plots percent vs. residual and residual vs. quantiles are used for visualizing the normality assumption. The variable “pv” represents outcome, i.e., average units of platelet per donor.
Against Quantum Noise
Creators: name: Ekert, A.
name: Macchiavello, C.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: This is a brief description of how to protect quantum states from dissipation and decoherence that arise due to uncontrolled interactions with the environment. We discuss recoherence and stabilisation of quantum states based on two techniques known as "symmetrisation" and "quantum error correction". We illustrate our considerations with the most popular quantum-optical model of the system-environment interaction, commonly used to describe spontaneous emission, and show the benefits of quantum error correction in this case.
description: 12 pages. Presented at the International Conference "Quantum Optics IV", Jaszowiec, Poland, June 17-24 1997. An introductory overview of quantum dissipation and error correction. Late submission to the archive due to requests and the limited availability of the journal
Additional file 11 of The apheresis platelet donation was increased after a nationwide ban on family/replacement donation in China
Creators: name: Chen, Jinyan
name: Zhou, Guoli
name: Fu, Xuemei
name: Li, Shijie
name: Li, Ying
name: Kang, Jianxun
name: Chen, Huiyou
name: Zhou, Liqiao
name: Fu, Yongshui
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology

description: Additional file 11. Final models derived from independent voluntary pseudo-panel datasets – voluntary GZ subset and voluntary CD subset.
Locality in the Fukaya category of a hyperkähler manifold
Creators: name: Solomon, Jake P.
name: Verbitsky, Misha
Publisher: name: arXiv
Year: 2018
Subjects: subject: Symplectic Geometry (math.SG)
subject: High Energy Physics - Theory (hep-th)
subject: Algebraic Geometry (math.AG)
subject: FOS: Mathematics
subject: FOS: Physical sciences
subject: 53C26, 53D37 (Primary), 53C38, 53D12, 32B20 (Secondary)

description: Let $(M,I,J,K,g)$ be a hyperkähler manifold. Then the complex manifold $(M,I)$ is holomorphic symplectic. We prove that for all real $x, y,$ with $x^2 + y^2 = 1$ except countably many, any finite energy $(xJ+yK)$-holomorphic curve with boundary in a collection of $I$-holomorphic Lagrangians must be constant. By an argument based on the Lojasiewicz inequality, this result holds no matter how the Lagrangians intersect each other. It follows that one can choose perturbations such that the holomorphic polygons of the associated Fukaya category lie in an arbitrarily small neighborhood of the Lagrangians. That is, the Fukaya category is local. We show that holomorphic Lagrangians are tautologically unobstructed in the sense of Fukaya-Oh-Ohta-Ono. Moreover, the Fukaya $A_\infty$ algebra of a holomorphic Lagrangian is formal. Our result also explains why the special Lagrangian condition holds without instanton corrections for holomorphic Lagrangians.
description: 43 pages, 2 figures; incorporated referee suggestions and other minor modifications, differs stylistically from published version
Quantum Dilogarithm as a 6j-Symbol
Creators: name: Kashaev, R. M.
Publisher: name: arXiv
Year: 1994
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Quantum Algebra (math.QA)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: The cyclic quantum dilogarithm is interpreted as a cyclic 6j-symbol of the Weyl algebra, considered as a Borel subalgebra $BU_q(sl(2))$. Using modified 6j-symbols, an invariant of triangulated links in triangulated 3-manifolds is constructed. Apparently, it is an ambient isotopy invariant of links.
description: 12 pages, TeX; references added
title: ADCO, Sixième cartulaire de Saint-Étienne de Dijon (1662), Cart. 30 (G 133), 441 folios, f. 482
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: cartulaire

description: Sixième cartulaire de Saint-Étienne de Dijon (1662), Archives départementales de la Côte-d'Or, Cart. 30 (G 133), 441 folios, f. 482, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Sixième cartulaire de Saint-Étienne de Dijon (1662), Archives départementales de la Côte-d'Or, Cart. 30 (G 133), 441 folios, f. 482, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https://manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
Nonlocality of the Einstein-Podolsky-Rosen state in the phase space
Creators: name: Banaszek, Konrad
name: Wodkiewicz, Krzysztof
Publisher: name: arXiv
Year: 1999
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We discuss violation of Bell inequalities by the regularized Einstein-Podolsky-Rosen (EPR) state, which can be produced in a quantum optical parametric down-conversion process. We propose an experimental photodetection scheme to probe nonlocal quantum correlations exhibited by this state. Furthermore, we show that the correlation functions measured in two versions of the experiment are given directly by the Wigner function and the Q function of the EPR state. Thus, the measurement of these two quasidistribution functions yields a novel scheme for testing quantum nonlocality.
description: 10 pages LaTeX, contribution to proceedings of 6th central-european workshop on quantum optics
Quantum theory of fluctuations in a cold damped accelerometer
Creators: name: Grassia, Francesca
name: Courty, Jean-Michel
name: Reynaud, Serge
name: Touboul, Pierre
Publisher: name: arXiv
Year: 1999
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We present a quantum network approach to real high sensitivity measurements. Thermal and quantum fluctuations due to active as well as passive elements are taken into account. The method is applied to the analysis of the capacitive accelerometer using the cold damping technique, developed for fundamental physics in space by ONERA and the ultimate limits of this instrument are discussed. It is confirmed in this quantum analysis that the cold damping technique allows one to control efficiently the test mass motion without degrading the noise level.
description: 10 pages, 6 figures, RevTeX; Minor changes
Generation and Measurement of Nonclassical States by Quantum Fock Filter
Creators: name: D'Ariano, G. M.
name: Maccone, L.
name: Paris, M. G. A.
name: Sacchi, M. F.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We study a novel optical setup which is able to select a specific Fock component from a generic input state. The device allows to synthesize number states and superpositions of few number states, and to measure the photon distribution and the density matrix of a generic input signal.
description: 7 pages LaTeX, contribution to proceedings of 6th central-european workshop on quantum optics (actaps.sty included)
Thermodynamic bootstrap program for integrable QFT's: Form factors and correlation functions at finite energy density
Creators: name: Cubero, Axel Cortés
name: Panfil, Miłosz
Publisher: name: arXiv
Year: 2018
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Exactly Solvable and Integrable Systems (nlin.SI)
subject: FOS: Physical sciences

description: We study the form factors of local operators of integrable QFT's between states with finite energy density. These states arise, for example, at finite temperature, or from a generalized Gibbs ensemble. We generalize Smirnov's form factor axioms, formulating them for a set of particle/hole excitations on top of the thermodynamic background, instead of the vacuum. We show that exact form factors can be found as minimal solutions of these new axioms. The thermodynamic form factors can be used to construct correlation functions on thermodynamic states. The expression found for the two-point function is similar to the conjectured LeClair-Mussardo formula, but using the new form factors dressed by the thermodynamic background, and with all singularities properly regularized. We study the different infrared asymptotics of the thermal two-point function, and show there generally exist two different regimes, manifesting massive exponential decay, or effectively gapless behavior at long distances, respectively. As an example, we compute the few-excitations form factors of vertex operators for the sinh-Gordon model.
description: 41 pages, 10 figures
SAOM model parameters and meta-analysis from Social interactions shape individual and collective personality in social spiders
Creators: name: Hunt, Edmund R.
name: Mi, Brian
name: Fernandez, Camila
name: Wong, Brandyn M.
name: Pruitt, Jonathan N.
name: Pinter-Wollman, Noa
Publisher: name: The Royal Society
Year: 2018
Subjects: subject: Ecology
subject: FOS: Biological sciences
subject: 60114 Systems Biology
subject: 60801 Animal Behaviour

description: Table S2
Additional file 2 of The apheresis platelet donation was increased after a nationwide ban on family/replacement donation in China
Creators: name: Chen, Jinyan
name: Zhou, Guoli
name: Fu, Xuemei
name: Li, Shijie
name: Li, Ying
name: Kang, Jianxun
name: Chen, Huiyou
name: Zhou, Liqiao
name: Fu, Yongshui
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology

description: Additional file 2. Demographics of individual plateletpheresis donors in CDBC.
The Adler-Shiota-van Moerbeke formula for the BKP hierarchy
Creators: name: van de Leur, Johan
Publisher: name: arXiv
Year: 1994
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Quantum Algebra (math.QA)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: We study the BKP hierarchy and prove the existence of an Adler--Shiota--van Moerbeke formula. This formula relates the action of the $BW_{1+\infty}$--algebra on tau--functions to the action of the ``additional symmetries'' on wave functions.
description: 11 pages of plain tex, no figures
The association of glutathione S-transferase T1 and M1 deletions with myocardial infarction
Creators: name: Zivkovic, Maja
name: Bubic, Maja
name: Kolakovic, Ana
name: Dekleva, Milica
name: Stankovic, Goran
name: Stankovic, Aleksandra
name: Djuric, Tamara
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Computational Biology

description: Glutathione S-transferases (GSTs) are the family of enzymes involved in the second line of defense against oxidative stress (OS). The lack of GSTT1/GSTM1 enzyme quantity or activity, due to the presence of homozygous deletion compromises antioxidative defense resulting in OS. OS is the critical mechanism in the pathophysiology of atherosclerosis, coronary artery disease, and myocardial infarction (MI). The increase in reactive oxygen species together with the process of apoptosis plays a role in left ventricular remodeling (LVR) after MI. The associations of GSTT1 and GSTM1 gene polymorphisms with the risk of MI are inconsistent. The aim was to analyze the association of GSTT1/GSTM1 null genotypes with first MI and LVR 8 months after the MI. The study involved 330 controls and 438 consecutive patients with symptoms and signs of first MI. The subgroup of 150 MI patients was prospectively followed up for 6 months. Evidence of maladaptive LVR was obtained by 2D Doppler echocardiography 3–5 days and 6 months after the MI. A multiplex polymerase chain reaction was used to detect the deletion in GSTT1 and GSTM1 genes. GSTM1 null genotype was significantly and independently associated with first MI (adjusted OR = 1.45 95% CI 1.03–2.03, p = 0.03). Association of double null genotypes with maladaptive LVR in patients 6 months after the first MI was no longer significant after adjustment for factors that differed significantly between patients with and without maladaptive LVR. This study demonstrated the association of GSTM1 null genotypes with the risk of MI in the Serbian population.
Spider group behavioural compositions from Social interactions shape individual and collective personality in social spiders
Creators: name: Hunt, Edmund R.
name: Mi, Brian
name: Fernandez, Camila
name: Wong, Brandyn M.
name: Pruitt, Jonathan N.
name: Pinter-Wollman, Noa
Publisher: name: The Royal Society
Year: 2018
Subjects: subject: Ecology
subject: FOS: Biological sciences
subject: 60114 Systems Biology
subject: 60801 Animal Behaviour

description: Figures S1-3, Table S1
Kähler hyperbolic manifolds and Chern number inequalities
Creators: name: Li, Ping
Publisher: name: arXiv
Year: 2018
Subjects: subject: Differential Geometry (math.DG)
subject: Algebraic Geometry (math.AG)
subject: FOS: Mathematics
subject: 32Q45, 57R20, 58J20

description: We show in this article that Kähler hyperbolic manifolds satisfy a family of optimal Chern number inequalities and the equality cases can be attained by some compact ball quotients. These present restrictions to complex structures on negatively-curved compact Kähler manifolds, thus providing evidence to the rigidity conjecture of S.-T. Yau. The main ingredients in our proof are Gromov's results on the $L^2$-Hodge numbers, the $-1$-phenomenon of the $χ_y$-genus and Hirzebruch's proportionality principle. Similar methods can be applied to obtain parallel results on Kähler non-elliptic manifolds. In addition to these, we term a condition called ``Kähler exactness", which includes Kähler hyperbolic and non-elliptic manifolds and has been used by B.-L. Chen and X. Yang in their work, and show that the canonical bundle of a Kähler exact manifold of general type is ample. Some of its consequences and remarks are discussed as well.
description: 16 pages, to appear in Transactions of the AMS
Additional file 12 of The apheresis platelet donation was increased after a nationwide ban on family/replacement donation in China
Creators: name: Chen, Jinyan
name: Zhou, Guoli
name: Fu, Xuemei
name: Li, Shijie
name: Li, Ying
name: Kang, Jianxun
name: Chen, Huiyou
name: Zhou, Liqiao
name: Fu, Yongshui
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology

description: Additional file 12. Examinations of the assumptions – normality and homoscedasticity of errors for the final mixed effects models derived from voluntary GZ (panels A and B) and CD (panels C and D) pseudo-panel datasets. Panels A and C present marginal Pearson residual plots, which are for the consideration of fixed effects only. Panels B and D visualize conditional Pearson residual plots, which are for the consideration of both fixed and random effects. The plot residuals vs. predicted outcome mean is used for examining the homoscedasticity assumption whereas the plots percent vs. residual and residual vs. quantiles are used for visualizing the normality assumption. The variable “pv” represents outcome, i.e., average units of platelet per donor.
Additional file 3 of The apheresis platelet donation was increased after a nationwide ban on family/replacement donation in China
Creators: name: Chen, Jinyan
name: Zhou, Guoli
name: Fu, Xuemei
name: Li, Shijie
name: Li, Ying
name: Kang, Jianxun
name: Chen, Huiyou
name: Zhou, Liqiao
name: Fu, Yongshui
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology

description: Additional file 3. Total number of plateletpheresis donations/donors/units and average number of plateletpheresis donations/units in GZBC.
Extended $r$-spin theory in all genera and the discrete KdV hierarchy
Creators: name: Buryak, Alexandr
name: Rossi, Paolo
Publisher: name: arXiv
Year: 2018
Subjects: subject: Algebraic Geometry (math.AG)
subject: Mathematical Physics (math-ph)
subject: FOS: Mathematics
subject: FOS: Physical sciences

description: In this paper we construct a family of cohomology classes on the moduli space of stable curves generalizing Witten's $r$-spin classes. They are parameterized by a phase space which has one extra dimension and in genus $0$ they correspond to the extended $r$-spin classes appearing in the computation of intersection numbers on the moduli space of open Riemann surfaces, while when restricted to the usual smaller phase space, they give in all genera the product of the top Hodge class by the $r$-spin class. They do not form a cohomological field theory, but a more general object which we call F-CohFT, since in genus $0$ it corresponds to a flat F-manifold. For $r=2$ we prove that the partition function of such F-CohFT gives a solution of the discrete KdV hierarchy. Moreover the same integrable system also appears as its double ramification hierarchy.
description: v3: minor changes, 34 pages
Evaluation of toxicological and teratogenic effects of carbosilane glucose glycodendrimers in zebrafish embryos and model rodent cell lines
Creators: name: Liegertová, Michaela
name: Wrobel, Dominika
name: Herma, Regina
name: Müllerová, Monika
name: Šťastná, Lucie Červenková
name: Cuřínová, Petra
name: Tomáš Strašák
name: Malý, Marek
name: Čermák, Jan
name: Jiří Smejkal
name: Štofik, Marcel
name: Maly, Jan
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Glycodendrimers (Glyco-DDMs) represent a rapidly growing class of nanoparticles with promising properties for biomedical applications but concerns regarding the impact on human health and environment are still justified. Here we report, for the first time, the comparative study of in vivo developmental toxicity of carbosilane Glyco-DDMs and their cytotoxicity in vitro. Carbosilane Glyco-DDMs (generation 1–3) containing 4, 8, and 16 β-d-glucopyranosyl units at the periphery (DDM1Glu, DDM2Glu, and DDM3Glu) were synthesized and characterized by 1H, 13C and 29Si NMR, mass spectrometry, dynamic light scattering, atomic force microscopy (AFM), and computer modeling. In vitro cytotoxicity assay (MTT) of DDM1–3Glu was performed on three different rodent cell lines (Cricetulus griseus) – B14 (ATCC, CCL-14.1), BRL 3A (ATCC, CRL-1442), and NRK 52E (ATCC, CRL-1571). Overall, very low cytotoxicity was observed with calculated IC50 in mM range with slight difference between each cell line and DDM generation investigated. Modified fish embryo test (FET) was further used for DDM3Glu developmental toxicity testing on zebrafish (Danio rerio) embryos. While seemingly harmless to intact embryos, adverse effects of DDMs on the embryonic development become evident after chorion removal (LD50=2.78 µM at 96 hpe). We summarized that the modified FET test showed a two to three orders of magnitude difference between the in vitro cytotoxicity and in vivo developmental toxicity of DDM3Glu. While, in general, the Glyco-DDMs show great promises as efficient vectors in targeted drug delivery or as therapeutic molecules itself, we suggest that their developmental toxicity should be thoroughly investigated to exclude safety risks associated with their potential biomedical use.
Corrigendum to "Regularity structures and renormalisation of FitzHugh-Nagumo SPDEs in three space dimensions"
Creators: name: Berglund, Nils
name: Kuehn, Christian
Publisher: name: arXiv
Year: 2018
Subjects: subject: Probability (math.PR)
subject: Mathematical Physics (math-ph)
subject: Neurons and Cognition (q-bio.NC)
subject: FOS: Mathematics
subject: FOS: Physical sciences
subject: FOS: Biological sciences
subject: 60H15, 35K57 (primary), 81S20, 82C28 (secondary)

description: Lemma 4.8 in the article [Regularity structures and renormalisation of FitzHugh-Nagumo SPDEs in three space dimensions, Electronic J. Probability 21 (18):1-48 (2016), arXiv:1504.02953] contains a mistake, which implies a weaker regularity estimate than the one stated in Proposition 4.11. This does not affect the proof of Theorem 2.1, but Theorems 2.2 and 2.3 only follow from the given proof if either the space dimension $d$ is equal to $2$, or the nonlinearity $F(U,V)$ is linear in $V$. To fix this problem and provide a proof of Theorems 2.2 and 2.3 valid in full generality, we consider an alternative formulation of the fixed-point problem, involving a modified integration operator with nonlocal singularity and a slightly different regularity structure. We provide the multilevel Schauder estimates and renormalisation-group analysis required for the fixed-point argument in this new setting.
description: 24 pages, corrigendum for arXiv:1504.02953, revised version
Quadratic curvature theories formulated as Covariant Canonical Gauge theories of Gravity
Creators: name: Benisty, David
name: Guendelman, Eduardo I.
name: Vasak, David
name: Struckmeier, Jurgen
name: Stoecker, Horst
Publisher: name: arXiv
Year: 2018
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The Covariant Canonical Gauge theory of Gravity is generalized by including at the Lagrangian level all possible quadratic curvature invariants. In this approach, the covariant Hamiltonian principle and the canonical transformation framework are applied to derive a Palatini type gauge theory of gravity. The metric $g_{μν}$, the affine connection $γ\indices{^λ_{μν}}$ and their respective conjugate momenta, $k^{μνσ}$ and $q\indices{_η^{αξβ}}$ tensors, are the independent field components describing the gravity. The metric is the basic dynamical field, and the connection is the gauge field. The torsion-free and metricity-compatible version of the space-time Hamiltonian is built from all possible invariants of the $q\indices{_η^{αξβ}}$ tensor components up to second order. These correspond in the Lagrangian picture to Riemann tensor invariants of the same order. We show that the quadratic tensor invariant is necessary for constructing the canonical momentum field from the gauge field derivatives, and hence for transforming between Hamiltonian and Lagrangian pictures. Moreover, the theory is extended by dropping metric compatibility and enforcing conformal invariance. This approach could be used for the quantization of the quadratic curvature theories, as for example in the case of conformal gravity.
description: 6 pages, 1 figure, last version before publishing in Phys Rev D
Flavoenzyme-catalyzed single-electron reduction of nitroaromatic antiandrogens: implications for their cytotoxicity
Creators: name: Nemeikaitė-Čėnienė, Aušra
name: Marozienė, Audronė
name: Misevičienė, Lina
name: Tamulienė, Jelena
name: Yantsevich, Aliaksei V.
name: Čėnas, Narimantas
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: The therapeutic action of nitroaromatic antiandrogens nilutamide and flutamide may be complicated by their cytotoxicity, whose mechanisms are still incomprehensively understood. In particular this concerns the enzymatic redox cycling of flutamide and its metabolites, and its impact on their cytotoxicity. In this work, we examined the single-electron reduction of nilutamide, flutamide, its metabolites 2-hydroxyflutamide and 4-nitro-3-trifluorormethyl-phenylamine, and a topical antiandrogen (3-amino-2-hydroxy-2-methyl-N-(4-nitro-3-trifluoromethyl)-phenyl) propanamide by NADPH:cytochrome P-450 reductase and adrenodoxin reductase/adrenodoxin. The obtained steady-state bimolecular rate constants of oxidant reduction (kcat/Km) enabled to establish single-electron reduction midpoint potentials (E17) of compounds, −0.377 – −0.413 V, which were in line with enthalpies of formation of their free radicals, obtained by quantum mechanical calculations. Using murine hepatoma MH22a cells, the obtained cytotoxicity vs. E17 correlation based on the data of model nitroaromatic compounds shows that redox cycling and oxidative stress could be the main factor of cytotoxicity of nitroaromatic antiandrogens. Other minor cytotoxicity factors could be their redox metabolism involving NAD(P)H:quinone oxidoreductase (NQO1) and cytochromes P-450.
Galaxy rotation curves in modified gravity models
Creators: name: de Almeida, Álefe O. F.
name: Amendola, Luca
name: Niro, Viviana
Publisher: name: arXiv
Year: 2018
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: In this work, we investigate the possibility that the galaxy rotation curves can be explained in the framework of modified gravity models that introduce a Yukawa term in the gravitational potential. We include dark matter and assume that the fifth-force couples differently to dark matter and to baryons. We aim at constraining the modified gravity parameters $β$ and $λ$, that is, the strength and the range of the Yukawa fifth force, respectively, using a set of 40 galaxy rotation curves data from the SPARC catalogue. We include baryonic gas, disk and bulge components, along with a NFW halo of dark matter. Each galaxy rotation curve is modeled with three free parameters, beside the two global Yukawa parameter. We find that the inclusion of the Yukawa term improves the $χ^2$ from $680.75$ to $536.23$ for $655$ degrees of freedom. As global best-fit we obtain $β= 0.34\pm0.04$ and $λ= 5.61\pm0.91$kpc and a dark matter content on average 20\% smaller than without the Yukawa term. The Bayesian evidence in favor of a NFW profile plus Yukawa term is higher than 8$σ$ with respect to the standard gravity parametrization.
description: v3: 22 pages, 7 figures, corrected typos
Additional file 1 of The apheresis platelet donation was increased after a nationwide ban on family/replacement donation in China
Creators: name: Chen, Jinyan
name: Zhou, Guoli
name: Fu, Xuemei
name: Li, Shijie
name: Li, Ying
name: Kang, Jianxun
name: Chen, Huiyou
name: Zhou, Liqiao
name: Fu, Yongshui
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology

description: Additional file 1. STROBE Statement—checklist of items that should be included in reports of observational studies.
Quercetin-3-rutinoside protects against gamma radiation inflicted hematopoietic dysfunction by regulating oxidative, inflammatory, and apoptotic mediators in mouse spleen and bone marrow
Creators: name: Dutta, Ajaswrata
name: Dahiya, Akshu
name: Verma, Savita
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: Cell Biology
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: FOS: Biological sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Hematology

description: Radiation-induced hematopoietic dysfunction is one of the most common problems during unplanned radiation exposures and also in cancer patients receiving radiotherapy. Management of the hematopoietic system is necessary to promote survival against radiation. The present study was undertaken to demonstrate the protective potential of Quercetin 3 rutinoside (Q-3-R), against gamma radiation-induced hematopoietic injuries. C57BL/6 male mice exposed either to radiation or pretreated with Q-3-R (10 mg/kg body weight) were checked for hematopoietic protection using hematotoxicity indices, histopathological, and genotoxic evaluations. To elucidate the underlying mechanisms of Q-3-R mediated hematopoietic protection, oxidative/nitrosative stress, inflammatory and apoptotic markers as well as PCNA expression in spleen cross-sections were assessed. Studies revealed Q-3-R pretreatment inhibited radiation-induced ROS in spleen cells and better maintained the total antioxidant levels in serum that were otherwise altered post 7.5 Gy exposure. The NO levels and nitrotyrosine expression were also found inhibited by Q-3-R in the spleen. Differential regulations of Bcl2, Bax and NF-κB with reduced serum TNF-α level indicated anti-apoptotic and anti-inflammatory roles of Q-3-R. Q-3-R attenuated radiation mediated spleen damage by minimizing cell death and promoting proliferation. Restoration of abnormal histopathological changes in bone marrow following Q-3-R administration correlated to reduced apoptosis and altered cell cycle distributions. Chromosomal aberrations were also found reduced in Q-3-R pretreated bone marrow. Q-3-R restored the total leukocyte counts and serum IL-6 levels, further supporting its role in promoting hematopoiesis. These findings suggest that Q-3-R can potentially be used to minimize radiation inflicted hematopoietic toxicities during accidental as well as radiotherapy scenarios.
title: ADCO, Cartulaire de Cîteaux pour les domaines de Saint-Jean de Losne et Losne (XVIIIe siècle), Cart. 198-01 (11 H 1055), 185 folios, f. 0001
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2019
name: Petot, Frédéric
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: cartulaire
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge

description: Cartulaire de Cîteaux pour les domaines de Saint-Jean de Losne et Losne (XVIIIe siècle), Archives départementales de la Côte-d'Or, Cart. 198-01 (11 H 1055), 185 folios, f. 0001, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cartulaire de Cîteaux pour les domaines de Saint-Jean de Losne et Losne (XVIIIe siècle), Archives départementales de la Côte-d'Or, Cart. 198-01 (11 H 1055), 185 folios, f. 0001, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https://manuscrits.cbma-project.eu/
description: Provenance: https://www.geonames.org/3024876
description: Provenance: http://www.idref.fr/030974844/id
description: Provenance: https://catalogue.bnf.fr/ark:/12148/cb12228351v
description: Provenance: abbaye de Cîteaux
description: Provenance: http://www.wikidata.org/entity/Q843261