cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
How Accurately Can We Calculate the Depth of the Solar Convective Zone?
Creators: name: Bahcall, John N.
name: Serenelli, Aldo M.
name: Pinsonneault, Marc
Publisher: name: arXiv
Year: 2004
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We evaluate the logarithmic derivative of the depth of the solar convective zone with respect to the logarithm of the radiative opacity. We use this expression to show that the radiative opacity near the base of the solar convective zone (CZ) must be known to an accuracy of +- 1% in order to calculate the CZ depth to the accuracy of the helioseismological measurement, R(CZ) = (0.713 +- 0.001)R(Sun). The radiative opacity near the base of the CZ that is obtained from OPAL tables must be increased by about 21% in the Bahcall-Pinsonneault (2004) solar model if one wants to invoke opacity errors in order to reconcile recent solar heavy abundance determinations with the helioseismological measurement of R(CZ). We show that the radiative opacity near the base of the convective zone depends sensitively upon the assumed heavy element mass fraction, Z. The uncertainty in the measured value of Z is currently the limiting factor in our ability to calculate the depth of the CZ. Different state-of-the-art interpolation schemes using the existing OPAL tables yield opacity values that differ by 4% . We describe the finer grid spacings that are necessary to interpolate the radiative opacity to 1%. Uncertainties due to the equation of state do not significantly affect the calculated depth of the convective zone.
description: Accepted for ApJ. Corrected numerical error in size of required opacity increase. Figures and table unchanged. Extrapolation discussion unchanged
Additional file 1 of Pictorial methods to assess heavy menstrual bleeding in research and clinical practice: a systematic literature review
Creators: name: Magnay, Julia
name: Shaughn Oâ€™Brien
name: Gerlinger, Christoph
name: Seitz, Christian
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology

description: Additional file 1. Electronic search strategy of Medline database, performed in NCBI Pubmed.
Characterization of the new free-air primary standard for medium-energy X-rays at CMI
Creators: name: Sochor, Vladimir
name: Solc, Jaroslav
Publisher: name: arXiv
Year: 2019
Subjects: subject: Instrumentation and Detectors (physics.ins-det)
subject: FOS: Physical sciences

description: In 2011 a decision was made by Czech Metrology Institute to build a free-air ionization chamber (FAC) intended to be used as a primary standard of air kerma rate for medium-energy X-rays (photon energy from 40 to 300 keV, including mammography X-ray qualities) in order to replace currently used secondary ionization chamber and to decrease the uncertainty of air kerma reference value. In period of 2013-2017, the FAC has been designed, manufactured and put into operation. Correction factors were measured or calculated by a Monte Carlo method. FAC performance was preliminary tested using a calibrated secondary chamber. Physical characteristics of the FAC are described and a summary of the correction factors with the uncertainty budget is presented.
description: 20 pages, 12 figures, 5 tables, final authors' version
Additional file 2 of Deep learning improves the ability of sgRNA off-target propensity prediction
Creators: name: Qiaoyue Liu
name: Cheng, Xiang
name: Liu, Gan
name: Bohao Li
name: Xiuqin Liu
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Marine Biology

description: Additional file 2. A detailed description of the model structure for model selection.
Infrastructure’s Long Lived Impact on Urban Development: Theory and Empirics
Creators: name: Grimes, Arthur
name: Apatocv, Eyal
name: Lutchman, Larissa
name: Robinson, Anna
name: Grimes, Arthur
name: Apatocv, Eyal
name: Lutchman, Larissa
name: Robinson, Anna
Publisher: name: Unknown
Year: 2014
Subjects: subject: Community/Rural/Urban Development
subject: Infrastructure
subject: city development
subject: population growth
subject: migration
subject: spatial equilibrium

description: We analyse impacts that infrastructure provision and other factors have on long run urban growth. Reflecting spatial equilibrium insights, growing cities have preferred attributes relative to other cities. These attributes may include natural characteristics, social amenities and transport infrastructure that have productive and/or amenity value. We outline a theoretical model that includes distance-related effects on individual utility and thence population location, and we test this model using historical data covering 1926 to 2006 across 56 New Zealand towns. Instruments dating back to 1880 are used to deal with potential endogeneity issues, and we use spatial-econometrics techniques to test for spatial spillovers between cities. Our analysis shows that four dominant factors have impacted positively on urban growth, especially since 1966: nearby land-use capability, human capital, sunshine hours and proximity to the country’s dominant city, Auckland.
Rural Cooperatives Magazine, September/ October 2016
Creators: name: Eberly, Joe
name: Barham, James
name: Bau, Margaret
name: Campbell, Dan
name: Borst, Alan
name: Cook, David R.
name: Hogeland, Julie A.
name: Nguyen, Mai
name: Brown, Kati
name: Tallon, Ahri
name: Crandall, Jim
name: Stumpf, Mary
name: Keeley, Kristy
name: McNamara, John A.
name: Scott, Hannah
name: Roush, Kimberly
name: Webster, Megan
name: Phillips, Linda D.
name: Wiener, Jason R.
name: Anderson, Michele
name: Eberly, Joe
name: Barham, James
name: Bau, Margaret
name: Campbell, Dan
name: Borst, Alan
name: Cook, David R.
name: Hogeland, Julie A.
name: Nguyen, Mai
name: Brown, Kati
name: Tallon, Ahri
name: Crandall, Jim
name: Stumpf, Mary
name: Keeley, Kristy
name: McNamara, John A.
name: Scott, Hannah
name: Roush, Kimberly
name: Webster, Megan
name: Phillips, Linda D.
name: Wiener, Jason R.
name: Anderson, Michele
Publisher: name: Unknown
Year: 2016
Subjects: Agribusiness
Community/Rural/Urban Development

description: Features- A 'Natural Choice'; 'Platform co-ops' gaining traction; Youth Movement; Resilience Thinking; A Co-Op Mont Special Section People build Cooperatives: Co-Ops Build a Better World
@MsDrData goes to Washington
Creators: name: Neidert, Lisa
Publisher: name: Zenodo
Year: 2013

description: National Public Radio had an open call to Tweet the 2012 Election at NPR headquarters. This presentation will describe the experience for @MsDrData. The presentation will cover the wide range of expertise of the Election2012 meet-up participants; research/preparation; technology and shared resources; an information fire hose; misinformation; live tweeting; production tours; and learning new technologies for recording the experience. This presentation will also put this experience in the larger context of Twitter: information, archival resource, analysis and prediction, and outreach.
Rural Cooperatives Magazine
Creators: name: Wassworth, James
name: Coleman, Charita
name: Rivera, Judith
name: Hoang, Huu
name: Reynolds, Bruce J.
name: Hurley, Daniel
name: Wassworth, James
name: Coleman, Charita
name: Rivera, Judith
name: Hoang, Huu
name: Reynolds, Bruce J.
name: Hurley, Daniel
Publisher: name: Unknown
Year: 2016
Subjects: Agribusiness
Community/Rural/Urban Development

description: Features- Co-ops Set Net Income Record; USDA B&I loan guarantees support rural businesses and worker co-ops; To 100 AG Co-ops; No Place Like Home
An Epidemiological Modelling Approach for Covid19 via Data Assimilation
Creators: name: Nadler, Philip
name: Wang, Shuo
name: Arcucci, Rossella
name: Yang, Xian
name: Guo, Yike
Publisher: name: arXiv
Year: 2020
Subjects: subject: Applications (stat.AP)
subject: Machine Learning (cs.LG)
subject: Methodology (stat.ME)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: The global pandemic of the 2019-nCov requires the evaluation of policy interventions to mitigate future social and economic costs of quarantine measures worldwide. We propose an epidemiological model for forecasting and policy evaluation which incorporates new data in real-time through variational data assimilation. We analyze and discuss infection rates in China, the US and Italy. In particular, we develop a custom compartmental SIR model fit to variables related to the epidemic in Chinese cities, named SITR model. We compare and discuss model results which conducts updates as new observations become available. A hybrid data assimilation approach is applied to make results robust to initial conditions. We use the model to do inference on infection numbers as well as parameters such as the disease transmissibility rate or the rate of recovery. The parameterisation of the model is parsimonious and extendable, allowing for the incorporation of additional data and parameters of interest. This allows for scalability and the extension of the model to other locations or the adaption of novel data sources.
description: Initial conference version accepted at International Conference of Machine Learning(ICML) workshop. Extended journal version was published in the European Journal of Epidemiology (https://doi.org/10.1007/s10654-020-00676-7). Please cite as accordingly
Lattice study on kaon nucleon scattering length in the I=1 channel
Creators: name: Meng, Guangwei
name: Miao, Chuan
name: Du, Xining
name: Liu, Chuan
Publisher: name: arXiv
Year: 2003
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: Using the tadpole improved clover Wilson quark action on small, coarse and anisotropic lattices, $KN$ scattering length in the I=1 channel is calculated within quenched approximation. The results are extrapolated towards the chiral and physical kaon mass region. Finite volume and finite lattice spacing errors are also analyzed and a result in the infinite volume and continuum limit is obtained which is compatible with the experiment and the results from Chiral Perturbation Theory.
description: 15 pages, 4 figures, typeset by latex using elsart.cls,minor changes
Rural Cooperatives Magazine, January/ February 2017
Creators: name: Wadsworth, James
name: Coleman, Charita
name: Rivera, Judith
name: Hoang, Huu
name: Campbell, Dan
name: Pitman, Lynn
name: Tianga, Keli A.
name: Wadsworth, James
name: Coleman, Charita
name: Rivera, Judith
name: Hoang, Huu
name: Campbell, Dan
name: Pitman, Lynn
name: Tianga, Keli A.
Publisher: name: Unknown
Year: 2017
Subjects: Agribusiness
Community/Rural/Urban Development

description: Features- Co-op Sales, State by State; Boosting Rural Entrepreneurs; Bogs Across America; Ready for 2017?; Next Boom for Worker Co-ops?; Hall of Fame Inducts "Co-op Heros"
Study of physicochemical parameters and wetland water quality assessment by using Shannon’s entropy
Creators: name: Singh, Kunwar R.
name: Dutta, Rahul
name: Kalamdhad, Ajay S.
name: Kumar, Bimlesh
Publisher: name: Springer International Publishing
Year: 2023

description: In water quality monitoring programs, optimization between information craved and information collected involves scrupulous judgment making processes and management approaches. The present study explores the few essential aspects of water quality monitoring program considering Shannon’s entropy with case studies on a few lakes and wetlands in North Guwahati, Assam (India). Firstly, the loss of information by traditional water quality indices (WQIs) has been addressed by the use of entropy weighted WQIs (EWQIs) which takes into account the randomness of data sets removing error through subjective judgments of experts in assigning parameter weights. This concept was extended to the quantification of heavy metals. The concept of multi-criteria decision-making methods (MCDMs) such as TOPSIS was introduced which utilize entropy weights and rough set theory to give a reliable and unbiased description of overall pollution levels of each sampling location. This study will be of great help to various agencies which take care of the water supply and water pollution control since this forms a significant tool for easy understanding and thereby making their applicability uncomplicated.
Qualitative Approach to Semi-Classical Loop Quantum Cosmology
Creators: name: Vereshchagin, G. V.
Publisher: name: arXiv
Year: 2004
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: Recently the mechanism was found which allows avoidance of the cosmological singularity within the semi-classical formulation of Loop Quantum Gravity. Numerical studies show that the presence of self-interaction potential of the scalar field allows generation of initial conditions for successful slow-roll inflation. In this paper qualitative analysis of dynamical system, corresponding to cosmological equations of Loop Quantum Gravity is performed. The conclusion on singularity avoidance in positively curved cosmological models is confirmed. Two cases are considered, the massless (with flat potential) and massive scalar field. Explanation of initial conditions generation for inflation in models with massive scalar field is given. The bounce is discussed in models with zero spatial curvature and negative potentials.
description: Online at http://www.iop.org/EJ/abstract/1475-7516/2004/07/013
Achieving real data security via community self-enforcement
Creators: name: Welpton, Richard
name: Kinder-Kurlanda, Katharina
Publisher: name: Zenodo
Year: 2013

description: Providers of sensitive/confidential data typically rely on IT-based measures to control the security of their data. Examples include swipe-card access to "controlled" rooms, with CCTV monitoring, sign-in procedures etc. When providing access to research data such a focus on security reinforces the message that researchers are a security problem. We argue that these measures not only are costly and increase barriers to sensible research, but also create the wrong incentives for researchers, who are seen as a threat to rather than collaborators in creating and maintaining secure. We argue that fostering a community of trusted researchers is the most effective way of achieving security. With the right incentives in place, researchers, when considering themselves as part of a community, will reinforce standards upon each other, lest their entire community is denied access to data. In addition, cumbersome or hard to comprehend measures are more likely to result in security breaches as researchers make mistakes or deliberately flout rules for the sake of convenience. We will explain how to build trusted communities of researchers around the secure data services of both the UKDS and GESIS – Leibniz Institute for the Social Sciences and how these fit with providers' and researchers' interests in secure and accessible data.
Long-term orbital dynamics of trans-Neptunian objects
Creators: name: Saillenfest, Melaine
Publisher: name: arXiv
Year: 2020
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: FOS: Physical sciences

description: This article reviews the different mechanisms affecting the orbits of trans-Neptunian objects, ranging from internal perturbations (planetary scattering, mean-motion resonances, secular effects) to external perturbations (galactic tides, passing stars). We outline the theoretical tools that can be used to model and study them, focussing on analytical approaches. We eventually compare these mechanisms to the observed distinct populations of trans-Neptunian objects and conclude on how they participate to the sculpting of the whole distribution.
description: 50 pages, 16 figures, 1 table. Accepted for publication in Celestial Mechanics and Dynamical Astronomy, special issue about trans-Neptunian objects
Additional file 1 of Direct-to-Implant Extracellular Matrix Hammock-based Breast Reconstruction; Prepectoral or Subpectoral?
Creators: name: Dyrberg, Diana
name: Gudjon Gunnarsson
name: Bille, Camilla
name: Sørensen, Jens
name: Thomsen, Jørn
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy

description: Additional file 1. Standard Protocol Items: Recommendations for Interventional Trials (SPIRIT) 2013 Checklist: recommended items to address in a clinical trial protocol and related documents*.
Lower bounds for regular genus and gem-complexity of PL 4-manifolds with boundary
Creators: name: Basak, Biplab
name: Binjola, Manisha
Publisher: name: arXiv
Year: 2020
Subjects: subject: Geometric Topology (math.GT)
subject: Combinatorics (math.CO)
subject: FOS: Mathematics
subject: Primary 57Q15, Secondary 57Q05, 57K41, 05C15

description: Let $M$ be a connected compact PL 4-manifold with boundary. In this article, we have given several lower bounds for regular genus and gem-complexity of the manifold $M$. In particular, we have proved that if $M$ is a connected compact $4$-manifold with $h$ boundary components then its gem-complexity $\mathit{k}(M)$ satisfies the following inequalities: $$\mathit{k}(M)\geq 3χ(M)+7m+7h-10 \mbox{ and }\mathit{k}(M)\geq \mathit{k}(\partial M)+3χ(M)+4m+6h-9,$$ and its regular genus $\mathcal{G}(M)$ satisfies the following inequalities: $$\mathcal{G}(M)\geq 2χ(M)+3m+2h-4\mbox{ and }\mathcal{G}(M)\geq \mathcal{G}(\partial M)+2χ(M)+2m+2h-4,$$ where $m$ is the rank of the fundamental group of the manifold $M$. These lower bounds enable to strictly improve previously known estimations for regular genus and gem-complexity of a PL $4$-manifold with boundary. Further, the sharpness of these bounds has also been shown for a large class of PL $4$-manifolds with boundary.
description: 21 pages, 4 figures. To appear in Forum Mathematicum. arXiv admin note: text overlap with arXiv:2001.10214
A Study of the Quasi-elastic (e,e'p) Reaction on $^{12}$C, $^{56}$Fe and $^{97}$Au
Creators: name: Dutta, D.
name: van Westrum, D.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: We report the results from a systematic study of the quasi-elastic (e,e'p) reaction on $^{12}$C, $^{56}$Fe and $^{197}$Au performed at Jefferson Lab. We have measured nuclear transparency and extracted spectral functions (corrected for radiation) over a Q$^2$ range of 0.64 - 3.25 (GeV/c)$^2$ for all three nuclei. In addition we have extracted separated longitudinal and transverse spectral functions at Q$^2$ of 0.64 and 1.8 (GeV/c)$^2$ for these three nuclei (except for $^{197}$Au at the higher Q$^2$). The spectral functions are compared to a number of theoretical calculations. The measured spectral functions differ in detail but not in overall shape from most of the theoretical models. In all three targets the measured spectral functions show considerable excess transverse strength at Q$^2$ = 0.64 (GeV/c)$^2$, which is much reduced at 1.8 (GeV/c)$^2$.
description: For JLab E91013 Collaboration, 19 pages, 20 figures, 3 tables
Faculty practices and perspectives on Research Data Management
Creators: name: Doty, Jennifer
name: Akers, Katherine
Publisher: name: Zenodo
Year: 2013

description: Our university library has a long history of supporting the data acquisition and analysis needs of campus researchers. To address the emerging trend in academic libraries to support research data management needs, and to focus our development efforts on the most effective services, we initiated a campus assessment in fall of 2012 to solicit input from faculty conducting research across all disciplines. The library and institutional research office invited science, social science, and humanities faculty to complete a brief online survey of their data management practices and perspectives, including questions on data management plans, documentation and metadata, data sharing and preservation. This presentation will share findings from our analysis of the survey data, including general and discipline specific responses. Preliminary analyses show that the majority of our researchers are not very familiar with funders' requirements and do not share their data with people outside of their research group. Although most researchers do not use disciplinary data repositories, many are somewhat or very interested in this option. The results of our survey give insight into researchers' data management practices and help identify services with the greatest potential to effectively support the creation, preservation, and dissemination of research data within the university.
A lattice calculation of vector meson couplings to the vector and tensor currents using chirally improved fermions
Creators: name: Braun, V. M.
name: Burch, T.
name: Gattringer, C.
name: Göckeler, M.
name: Lacagnina, G.
name: Schaefer, S.
name: Schäfer, A.
Publisher: name: arXiv
Year: 2003
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We present a quenched lattice calculation of $f_V^\perp/f_V$, the coupling of vector mesons to the tensor current normalized by the vector meson decay constant. The chirally improved lattice Dirac operator, which allows us to reach small quark masses, is used. We put emphasis on analyzing the quark mass dependence of $f_V^\perp/f_V$ and find only a rather weak dependence. Our results at the $ρ$ and $ϕ$ masses agree well with QCD sum rule calculations and those from previous lattice studies.
description: 6 pages, 3 figures, one sentence removed
On the design space between molecular mechanics and machine learning force fields
Creators: name: Wang, Yuanqing
name: Takaba, Kenichiro
name: Chen, Michael S.
name: Wieder, Marcus
name: Xu, Yuzhi
name: Zhu, Tong
name: Zhang, John Z. H.
name: Nagle, Arnav
name: Yu, Kuang
name: Wang, Xinyan
name: Cole, Daniel J.
name: Rackers, Joshua A.
name: Cho, Kyunghyun
name: Greener, Joe G.
name: Eastman, Peter
name: Martiniani, Stefano
name: Tuckerman, Mark E.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Chemical Physics (physics.chem-ph)
subject: Artificial Intelligence (cs.AI)
subject: Machine Learning (cs.LG)
subject: Biological Physics (physics.bio-ph)
subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: A force field as accurate as quantum mechanics (QM) and as fast as molecular mechanics (MM), with which one can simulate a biomolecular system efficiently enough and meaningfully enough to get quantitative insights, is among the most ardent dreams of biophysicists -- a dream, nevertheless, not to be fulfilled any time soon. Machine learning force fields (MLFFs) represent a meaningful endeavor towards this direction, where differentiable neural functions are parametrized to fit ab initio energies, and furthermore forces through automatic differentiation. We argue that, as of now, the utility of the MLFF models is no longer bottlenecked by accuracy but primarily by their speed (as well as stability and generalizability), as many recent variants, on limited chemical spaces, have long surpassed the chemical accuracy of $1$ kcal/mol -- the empirical threshold beyond which realistic chemical predictions are possible -- though still magnitudes slower than MM. Hoping to kindle explorations and designs of faster, albeit perhaps slightly less accurate MLFFs, in this review, we focus our attention on the design space (the speed-accuracy tradeoff) between MM and ML force fields. After a brief review of the building blocks of force fields of either kind, we discuss the desired properties and challenges now faced by the force field development community, survey the efforts to make MM force fields more accurate and ML force fields faster, envision what the next generation of MLFF might look like.
Muon collider probes of Majorana neutrino dipole moments and masses
Creators: name: Frigerio, Michele
name: Vignaroli, Natascia
Publisher: name: arXiv
Year: 2024
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: Majorana neutrinos may have transitional dipole moments, which violate lepton number as well as lepton flavour. We estimate the sensitivity of future colliders to the electron-muon neutrino dipole moment, $λ_{eμ}$, by considering same-sign dilepton final states. We find that hadron colliders, even the proposed FCC-hh, are sensitive only to $|λ_{eμ}|\gtrsim 10^{-9}μ_B$ (with $μ_B$ the Bohr magneton), a value two-three orders of magnitude larger than current bounds from astrophysics and low-energy neutrino-scattering experiments. In the case of a future muon collider, we show that the sensitivity varies from $|λ_{eμ}|\sim 5\cdot 10^{-9}μ_B$ for energy $\sqrt{s}\simeq 3$ TeV, to $\sim 10^{-12}μ_B$ for $\sqrt{s}\simeq 50$ TeV, matching the current laboratory bounds for $\sqrt{s}\simeq 30$ TeV. The singular advantage of the muon collider signal would be a direct, clean identification of lepton number and flavour violation. We also show that a muon collider would improve by orders of magnitude the direct bounds on $m_{eμ}$ and $m_{μμ}$, two of the entries of the Majorana neutrino mass matrix. These bounds could be as strong as $\sim 50$ keV, still far above the neutrino mass scale.
description: v2: discussion of the EFT validity and several clarifications added. Accepted for publication in JHEP
Impact of a companion and of chromospheric emission on the shape of chromosome maps for globular clusters
Creators: name: Martins, Fabrice
name: Morin, Julien
name: Charbonnel, Corinne
name: Lardo, Carmela
name: Chantereau, William
Publisher: name: arXiv
Year: 2020
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We investigate the role of binaries and chromospheric emission on HST photometry of globular clusters' stars. We quantify their respective effects on the position of stars in the chromosome map, especially among the first population. We computed atmosphere models and synthetic spectra for stars of different chemical compositions, based on isochrones produced by stellar evolution calculations with abundance variations representative of first and second populations in GCs. From this we built synthetic chromosome maps for a mixture of stars of different chemical compositions. We subsequently replaced a fraction of stars with binaries, or stars with chromospheric emission, using synthetic spectroscopy. We studied how the position of stars is affected in the chromosome map. Binaries can, in principle, explain the extension of the first population in the chromosome map. However, we find that given the binary fraction reported for GCs, the density of stars in the extended part is too small. Another difficulty of the binary explanation is that the shape of the distribution of the first population in the chromosome map is different in clusters with similar binary fractions. Additionally, we find that the contribution of chromospheric emission lines to the HST photometry is too small to have an observable impact on the shape of the chromosome map. Continuum chromospheric emission has an effect qualitatively similar to binaries. We conclude that binaries do have an impact on the morphology of the chromosome map of GCs, but they are unlikely to explain entirely the shape of the extended distribution of the first population stars. Uncertainties in the properties of continuum chromospheric emission of stars in GCs prevent any quantitative conclusion. Therefore, the origin of the extended first population remains unexplained.
description: 11 pages, 10 figures. Accepted in Astronomy & Astrophysics
Rural Cooperatives Magazine, May/ June 2017
Creators: name: Barham, James
name: Feldstein, Sasha
name: Matson, James
name: Armstrong, Lorraine
name: Campbell, Dan
name: Miller, W. Todd
name: Clippinger, Lucy
name: Moriarty, Meegan
name: Mayberry, Anne
name: Barham, James
name: Feldstein, Sasha
name: Matson, James
name: Armstrong, Lorraine
name: Campbell, Dan
name: Miller, W. Todd
name: Clippinger, Lucy
name: Moriarty, Meegan
name: Mayberry, Anne
Publisher: name: Unknown
Year: 2017
Subjects: Agribusiness
Community/Rural/Urban Development

description: Features- Learning form Food Hub Closures; Saving the Last Grocery Store; The co-op Center that refused to die!; Clean & Green; A Born Cooperator
Collective modes in strange and isospin asymmetric hadronic matter
Creators: name: Aguirre, R. M.
name: De Paoli, A. L.
Publisher: name: arXiv
Year: 2004
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We study the propagation of non-strange and strange meson modes in hadronic matter considering both isospin and strangeness mixings induced by quantum fluctuations in the medium. Baryons are described using the Quark Meson Coupling model extended to include interactions of strange quarks. In particular we evaluate the dependence of the meson masses on the baryonic density, the strangeness fraction and the isospin asymmetry of the medium. We have found a considerable admixture of strangeness and isospin in the sigma-mode in the high density regime.
description: 10 pages, 3 figures
Additional file 5 of Comparative genomics applied to Mucor species with different lifestyles
Creators: name: Lebreton, Annie
name: Corre, Erwan
name: Jany, Jean-Luc
name: Brillet-Guéguen, Loraine
name: Pèrez-Arques, Carlos
name: Garre, Victoriano
name: Misharl Monsoor
name: Debuchy, Robert
name: Meur, Christophe Le
name: Coton, Emmanuel
name: Barbier, Georges
name: Meslet-Cladière, Laurence
Publisher: name: figshare
Year: 2020
Subjects: subject: Space Science
subject: Molecular Biology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences

description: Additional file 5: Table S2. Extraction and sequencing information corresponding to the four newly sequenced Mucor isolates
Rural Cooperatives Magazine, July/ August 2017
Creators: name: Wadsworth, James
name: Campbell, Dan
name: Goodwin, Jeff
name: Brislen, Lilian
name: Barham, James
name: Feldstein, Sasha
name: Borst, Alan
name: Gray, Thomas W.
name: Moriarty, Meegan
name: Hogeland, Julie A.
name: Wadsworth, James
name: Campbell, Dan
name: Goodwin, Jeff
name: Brislen, Lilian
name: Barham, James
name: Feldstein, Sasha
name: Borst, Alan
name: Gray, Thomas W.
name: Moriarty, Meegan
name: Hogeland, Julie A.
Publisher: name: Unknown
Year: 2017
Subjects: Agribusiness
Community/Rural/Urban Development

description: Features- Job Generators; From Rivals to Cooperators; Top 10 Traits of a Successful Grazing Land Manager; Learning from Food Hub Closures, Pt. II; Farmers using co-ops to handle 'big data'; Priority voting system may offer advantages for changing co-op sector; How do we foster a new generation of cooperators?; Understanding the role of values in traditional and hybrid cooperatives
Data are like parachutes: They work best when open
Creators: name: Mauer, Reiner
name: Watteler, Oliver
Publisher: name: Zenodo
Year: 2013

description: The call for "open data" is very popular these days. The Open Access movement has gained a lot of momentum during the last decade and publishing under this model has partly become routine for researchers. But even though e.g. the Berlin Declaration (2003) mentions free and unrestricted access to research data, there is still a long way to go for the advocates of data sharing. A significant part of research data is still not accessible and will probably be part of the "digital oblivion movement" in the near future. What is actually meant by "open data"? The Open Knowledge Foundation defines "open data" as "data that can be freely used, reused and redistributed by anyone, subject only, at most, to the requirement to attribute and share alike." However, in practice openness can have different meanings. These meanings form a continuum ranging from the mere documentation of the existence of data to unrestricted and direct access to the actual datasets. We will analyze different access scenarios to research data to disentangle the legal, organizational and economic aspects that need to be taken into account when talking about "opening" access to data.
Additional file 1 of Identification of hemolysin encoding genes and their association with antimicrobial resistance pattern among clinical isolates of coagulase-negative Staphylococci
Creators: name: Nasaj, Mona
name: Saeidi, Zahra
name: Asghari, Babak
name: Ghodratollah Roshanaei
name: Arabestani, Mohammad
Publisher: name: figshare
Year: 2020
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Table S1. Primers used in this study. Table S2. The prevalence of mecA gene and types of hemolysins among MR-CoNS species.
Nucleon axial charge from quenched lattice QCD with domain wall fermions
Creators: name: Sasaki, Shoichi
name: Orginos, Kostas
name: Ohta, Shigemi
name: Blum, Tom
Publisher: name: arXiv
Year: 2003
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We present a quenched lattice calculation of the nucleon isovector vector and axial-vector charges gV and gA. The chiral symmetry of domain wall fermions makes the calculation of the nucleon axial charge particularly easy since the Ward-Takahashi identity requires the vector and axial-vector currents to have the same renormalization, up to lattice spacing errors of order O(a^2). The DBW2 gauge action provides enhancement of the good chiral symmetry properties of domain wall fermions at larger lattice spacing than the conventional Wilson gauge action. Taking advantage of these methods and performing a high statistics simulation, we find a significant finite volume effect between the nucleon axial charges calculated on lattices with (1.2 fm)^3 and (2.4 fm)^3 volumes (with lattice spacing, a, of about 0.15 fm). On the large volume we find gA = 1.212 +/- 0.027(statistical error) +/- 0.024(normalization error). The quoted systematic error is the dominant (known) one, corresponding to current renormalization. We discuss other possible remaining sources of error. This theoretical first principles calculation, which does not yet include isospin breaking effects, yields a value of gA only a little bit below the experimental one, 1.2670 +/- 0.0030.
description: 38 pages, 12 figures, 9 tables, Revtex. Version accepted for publication in Physical Review D
SupercalifragilisticexpialiDotStat
Creators: name: Russell, Celia
name: Wiseman, Richard
Publisher: name: Zenodo
Year: 2013

description: As part of the new UK Data Service, a fresh and innovative platform for disseminating country-level international data has now been released. The new interface, UKDS.Stat, uses OECD data warehousing technology and the Statistical Data and Metadata Exchange (SDMX) standard to provide an enhanced user experience with the additional benefit of improvements to the hidden task of data ingest and processing. This presentation sets out the approach taken to choose the new DotStat software; the process of requirements gathering, assessing contenders and finally signing a Memorandum of Understanding with the OECD to work alongside other members of the Statistical Information Systems Community Collaboration team to help develop this non-commercial product. The characteristics and features of the DotStat software will be described, particularly integrated metadata, visualization and searching capabilities. We shall also mention some of the ups and downs we've encountered working with a non-commercial, community based platform. Finally we will set out a possible vision for the future for the UKDS.Stat platform whereby intergovernmental data delivered in SDMX format can be ingested and checked with a minimum of manual intervention enabling the UK Data Service to make available a huge amount of freely available country-level international data.
title: DOMES. Architectural Technology Transfer on the Silk Road: Iranian Double-Shell Domes and the West: 14th to 20th Century. Data Management Plan
Creators: name: Vigotti, Lorenzo
Publisher: name: University of Bologna
Year: 2023

description: This is the Data Management Plan for the DOMES project, version 01, published on 1 December 2023 by Lorenzo Vigotti. DOMES (Architectural Technology Transfer on the Silk Road: Iranian Double-Shell Domes and the West: 14th to 20th Century) is a project funded by European Union, Horizon Europe Programme. Grant Agreement num. 101111404.
Getting some bang for the buck: Reaching out to journalists
Creators: name: Neidert, Lisa
Publisher: name: Zenodo
Year: 2013

description: Much of the emphasis on statistical and data literacy involves teaching students how to use, manipulate, and interpret data. And, university settings are appropriate venues for this effort. However, for many, the horse has already left the barn. How do we reach folks who are no longer in a university setting but potentially have greater impact than our statistically literate researchers? A typical journalist, even for relatively weak web-only newspapers, reaches a wider audience than publications in journals, which may only have 10 citations 5-years after publication. And, journalists for major newspapers reach a very large audience on the order of millions. Thus, it is well worth our time to reach out to bloggers/journalists. This presentation will provide (a) examples of focused training/follow-up for journalists and (b) subject-specific content. It will close with an example of academics who reach out to wide audiences with blogs and Twitter. This could be a model for data professionals and/or for research faculty.
Mass Parameterizations and Predictions of Isotopic Observables
Creators: name: Souza, S. R.
name: Danielewicz, P.
name: Gupta, S. Das
name: Donangelo, R.
name: Friedman, W. A.
name: Lynch, W. G.
name: Tan, W. P.
name: Tsang, M. B.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: We discuss the accuracy of mass models for extrapolating to very asymmetric nuclei and the impact of such extrapolations on the predictions of isotopic observables in multifragmentation. We obtain improved mass predictions by incorporating measured masses and extrapolating to unmeasured masses with a mass formula that includes surface symmetry and Coulomb terms. We find that using accurate masses has a significant impact on the predicted isotopic observables.
description: 12 pages, 4 figures
Rural Cooperatives Magazine, September/ October 2017
Creators: name: Merlo, Catherine
name: Borst, Alan
name: Abernathy, Donna
name: Gregory, Guy
name: Brown, Rob
name: Bowman, Kati
name: Baca, Sandra
name: Harlow, Ivory
name: McNamara, John
name: Webster, Megan
name: Kesler, Clarice L.
name: Byrne, Mary
name: DeMets, Catie
name: Merlo, Catherine
name: Borst, Alan
name: Abernathy, Donna
name: Gregory, Guy
name: Brown, Rob
name: Bowman, Kati
name: Baca, Sandra
name: Harlow, Ivory
name: McNamara, John
name: Webster, Megan
name: Kesler, Clarice L.
name: Byrne, Mary
name: DeMets, Catie
Publisher: name: Unknown
Year: 2017
Subjects: Agribusiness
Community/Rural/Urban Development

description: Features- Crossing the Merger Finish Line; "Cooperatives Commit" theme for Co-op Month '17; More than a Fire Drill; A Proclamation: National Cooperative Month; Why We Celebrate Co-op Month
Visualization: On reluctance and tools
Creators: name: Perret, Andreas
Publisher: name: Zenodo
Year: 2013

description: Whenever a researcher presents his work, some visual support almost inevitably comes along, and the audience is gratified with at least some chart or graphic. Fancy or rudimental, these visualizations are never innocent, we know it, researchers know it, but the topic is seldom addressed in discussions. To understand the issues of visualization in the social sciences, we have chosen to follow two paths that seem to venture in opposite directions: As society is a very tough subject to describe, social scientists have spent decades to master a complex vocabulary that is (somewhat) unanimously accepted. Introducing graphics in that well groomed landscape brings up touchy issues such as how we convince each other of the quality of our findings. Social scientists use statistical packages for to analyze data; they have different visualization possibilities, but differences arise in other dimension as well. So choosing one over another has implication that range from the attitude towards intellectual property to the kind of journal that is likely to publish a paper. Through interviews with social scientists we intend to show how five communities have shaped - and been shaped by - their statistical tools.
Do-It-Yourself Research Data Management Training Kit for Librarians
Creators: name: Rice, Robin
Publisher: name: Zenodo
Year: 2013

description: As part of the University of Edinburgh's Research Data Management Roadmap, a pilot training of four liaison librarians was facilitated by the University's Data Library over a four month period in 2012-13. The training design was discussed and agreed by the participants and a mid-period evaluation helped to fine tune the remaining training sessions and affirm the overall approach. The components of the University of Edinburgh training sessions have been packaged for re-use by librarians at other institutions to conduct a do-it-yourself training course in research data management. The design of the course takes advantage of the librarians' professional experience of working with student and research communities to apply their existing skills towards a new arena for them: research data and its management. Course components include: units from MANTRA, an open, online research data management course hosted at the University of Edinburgh; reflective writing assignments; face to face group discussion; selected group exercises from the UK Data Archive's Train the Trainers suite; and expert speakers who provide reinforcement of the learning points at the start of each face to face session. Each speaker has been voice-recorded to create an audio-visual presentation which can be re-used by other institutions as well.
Model Atmospheres for Irradiated Stars in pre-Cataclysmic Variables
Creators: name: Barman, Travis S.
name: Hauschildt, Peter H.
name: Allard, France
Publisher: name: arXiv
Year: 2004
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Model atmospheres have been computed for M dwarfs that are strongly irradiated by nearby hot companions. A variety of primary and secondary spectral types are explored in addition to models specific to four known systems: GD 245, NN Ser, AA Dor, and UU Sge. This work demonstrates that a dramatic temperature inversion is possible on at least one hemisphere of an irradiated M dwarf and the emergent spectrum will be significantly different from an isolated M dwarf or a black body flux distribution. For the first time, synthetic spectra suitable for direct comparison to high-resolution observations of irradiated M dwarfs in non-mass transferring post-common envelope binaries are presented. The effects of departures from local thermodynamic equilibrium on the Balmer line profiles are also discussed.
description: Accepted for publication in ApJ; 12 pages, 10 figures
Who runs fastest in an adaptive landscape: Sexual versus asexual reproduction
Creators: name: Holmstrom, Kerstin
name: Jensen, Henrik Jeldtoft
Publisher: name: arXiv
Year: 2003
Subjects: subject: Condensed Matter (cond-mat)
subject: Populations and Evolution (q-bio.PE)
subject: FOS: Physical sciences
subject: FOS: Biological sciences

description: We compare the speed with which a sexual, respectively an asexual, population is able to respond to a biased selective pressure. Our model focuses on the Weismann hypothesis that the extra variation caused by crossing-over and recombination during sexual reproduction allows a sexual population to adapt faster. We find, however, that the extra variation amongst the progeny produced during sexual reproduction for most model parameters is unable to overcome the effect that parents with a high individual fitness in general must mate with individuals of lower individual fitness resulting in a moderate reproductive fitness for the pair.
description: 11 pages and 6 figures
Higgs Inflation: constraining the top quark mass and breaking the $H_0$-$σ_8$ correlation
Creators: name: Rodrigues, Jamerson G.
name: Benetti, Micol
name: de Souza, Rayff
name: Alcaniz, Jailson
Publisher: name: arXiv
Year: 2023
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Extending previous results [JHEP 11 (2021) 091], we explore aspects of the reheating mechanism for non-minimal Higgs inflation in the strong coupling regime. We constrain the radiative corrections for the inflaton's potential by considering the Coleman-Weinberg approximation and use the Renormalization Group Equations for the Higgs field to derive an upper limit on the quark top mass, $m_t$. Using the current Cosmic Microwave Background, Baryon Acoustic Oscillation, and Supernova data, we obtain $m_t \leq 170.44$ GeV, confirming the observational compatibility of the model with recent $m_t$ estimates reported by the CMS collaboration. We also analyze the breakdown of the well-known correlation involving the Hubble constant $H_0$ and the clustering parameter $σ_8$, which makes the model interesting in light of the cosmological tensions discussed over the last decade.
description: 13 pages, 3 figures, 1 table
Rural Cooperatives Magazine, November/ December 2017
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Creators: name: Abernathy, Donna
name: Welch-White, Venus
name: Langan, Renie
name: Wadsworth, James
name: Coleman, Charita
name: Rivera, Judith
name: Hogeland, Julie A.
name: Del Signore, Diane
name: Barham, James
name: Abernathy, Donna
name: Welch-White, Venus
name: Langan, Renie
name: Wadsworth, James
name: Coleman, Charita
name: Rivera, Judith
name: Hogeland, Julie A.
name: Del Signore, Diane
name: Barham, James
Publisher: name: Unknown
Year: 2017
Subjects: Agribusiness
Community/Rural/Urban Development

description: Features- Battered, but not Beaten; Ready for the 'Big Game'; Co-ops Advocate for Rural Infrastructure; Ag Co-ops Set Asset Record; Top 100 Ag Co-ops; Uniting for Common Cause; Learning from Food Hub Closures, Part 3