cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Oxythrips Uzel
Creators: name: Mound, Laurence A.
name: Tree, Desley J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Thysanoptera
Thripidae
Oxythrips

description: Oxythrips Uzel
Oxythrips Uzel, 1895: 133. Type-species Oxythrips ajugae Uzel
This genus currently comprises a series of 49 species (Mound 2011), each of which is unusual in having a single pair of major posteroangular setae on the pronotum. Of the included species, 12 are based on fossils, and all but two of the remainder are known only from the northern hemisphere. The two exceptions are O. skottsbergi (Ahlberg) from Chile, a species known only from the original inadequate description, and O. agathidis Morison from Queensland, Australia. The new species described below differs from most species placed in Oxythrips in having on tergum VIII a distinctive ctenidium-like structure antero-lateral to each spiracle (Fig. 4), and a long and regular posteromarginal comb of microtrichia, the posterior margin of this tergum usually lacking such microtrichia. O. agathidis is an exception in that it also has a well-developed regular comb on the eighth tergum. The new species is also unusual in that the metanotal median setae are long, arise at the anterior margin of this sclerite, and are far apart and close to the smaller lateral pair, whereas Oxythrips species, including O. agathidis, have the metanotal median setae small and placed well back from the anterior margin of this sclerite. The first vein of the forewing of the new species has a more extensive setal row than in most Oxythrips species, and the male has only one pair of stout setae medially on tergite IX.
Several species of the genus Oxythrips are associated with the plant genus Pinus, as are the species of the related genus Chilothrips. These two thrips genera appear to be strictly Holarctic, and are known only from the northern hemisphere, including India, China and Japan. Neither of the two Australian species placed in Oxythrips seem closely related to any of the northern hemisphere members of the genus, and these two are probably not closely related to each other. Despite this, standard identification keys will place both species as Oxythrips, because of the presence of a single pair of pronotal posteroangular setae. Until the thrips fauna of northern Australia and the island of New Guinea is better explored it seems best to leave these two species in Oxythrips, rather than to erect two new monobasic genera of doubtful affinities.
description: Published as part of Mound, Laurence A. & Tree, Desley J., 2011, New records and four new species of Australian Thripidae (Thysanoptera) emphasise faunal relationships between northern Australia and Asia, pp. 35-48 in Zootaxa 2764 on pages 35-36, DOI: 10.5281/zenodo.276839
Projectothrips Moulton
Creators: name: Mound, Laurence A.
name: Tree, Desley J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Thysanoptera
Thripidae
Projectothrips

description: Projectothrips Moulton
Projectothrips Moulton, 1929: 95. Type-species Projectothrips pruthi Moulton
Species of this genus are highly distinctive, because of the elongate, slender, eighth antennal segment that is about nine times as long as wide (Fig. 14). Together with its generic synonym Docidothrips Priesner, the genus currently includes eight species. Each of these is known only from the Oriental and Pacific Regions, and they all live in the flowering spikes of Pandanus species (screw pines). Collecting thrips from these flowers can be particularly difficult, and thus several of the species are known from few specimens with little information on intraspecific variation. The new species described below has been taken on two different species of Pandanus at two widely separated localities.
description: Published as part of Mound, Laurence A. & Tree, Desley J., 2011, New records and four new species of Australian Thripidae (Thysanoptera) emphasise faunal relationships between northern Australia and Asia, pp. 35-48 in Zootaxa 2764 on page 38, DOI: 10.5281/zenodo.276839
Rhamphothrips
Creators: name: Mound, Laurence A.
name: Tree, Desley J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Thysanoptera
Thripidae
Rhamphothrips

description: Key to Rhamphothrips species from Australia
1. Female sternum VII setae S1 and S2 very small, shorter than distance between their bases (Fig. 30); female fore tibia with ventral apical margin bearing two small tubercles each with one seta; metanotum closely but irregularly striate (Fig. 29); male fore coxae with hook-like tubercle posteromedially (Figs 27, 28); male terga II–VIII with toothed craspedum complete across posterior margin (Fig. 23), IX with median setal pair far apart and each arising on a small tubercle (Fig. 23)....... tenuirostris
-. Female sternum VII setae S1 and S2 longer than distance between their bases (Fig. 18); female fore tibia without ventral apical tubercles; metanotum with irregular longitudinal reticulation (Fig. 25); male fore coxae without hook-like tubercle; male tergum IX median setae different (Figs 21, 22)............................................................... 2
2. Male with craspedum toothed laterally only on tergum VII (Fig. 22); male tergum IX median setae arising well separated from each other (Fig. 22); female with antennal segments IV–V largely pale with apex shaded, VI brown with base variably paler............................................................................................... pandens
-. Male with craspedum toothed laterally on additional terga; male tergum IX median setae arising close together on one or a pair of small tubercles; female with antennal segment V light brown or dark brown................................... 3
3. Females with antennal segments V–VIII almost uniformly dark brown, I–IV sharply paler than V; male terga III–VIII with craspedum prominently toothed laterally (Fig. 17); ovipositor less than 240 microns long......................... amyae
-. Females with antennal segments I–III pale, IV shaded in apical third, V–VIII light brown; male with craspedum toothed laterally only on terga VI–VII (Fig. 21); ovipositor often 270 microns long........................................ cissus
description: Published as part of Mound, Laurence A. & Tree, Desley J., 2011, New records and four new species of Australian Thripidae (Thysanoptera) emphasise faunal relationships between northern Australia and Asia, pp. 35-48 in Zootaxa 2764 on page 41, DOI: 10.5281/zenodo.276839
Rhamphothrips tenuirostris Karny
Creators: name: Mound, Laurence A.
name: Tree, Desley J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Thysanoptera
Thripidae
Rhamphothrips
Rhamphothrips tenuirostris

description: Rhamphothrips tenuirostris (Karny)
Rhynchothrips tenuirostris Karny, 1912: 297
Females of this species can be recognised by the condition of both median pairs of setae on sternum VII being minute (Fig. 30), scarcely twice as long as their basal pores. This contrast with the condition mentioned above in two species from India, R. santokhi and R. parviceps in which only the median of these two pairs of setae, S1, is minute and thus much smaller than setae S2, and all other members of the genus in which both pairs of setae are long (Fig. 18). Bhatti (1978b) distinguished the Indian species R. aureus (and its synonym R. hartwigi) from R. tenuirostris, described from Java, on character states that appear to be related to body size. These differences may not be valid, because the number and size of the lateral setae on the mesosternum differ considerably between the largest and smallest males listed below from Uncaria lanosa in Australia (Figs 27, 28). Bhatti (1977) provided clear illustrations of the male genitalia of R. aureus, indicating that the phallus bears a pair of upward pointing spikes. Males from Uncaria in Australia that are here identified as R. tenuirostris have the phallus essentially similar to those illustrations. Terga I–VIII of aureus were described as “completely sculptured with transverse anastomosing lines” and similar but faint lines are visible in specimens from Australia. On tergum IX of the Australian males there is a pair of small, widely separated, tubercles (Fig. 23), and ventrolaterally there is a group of stout microtrichia.
Material studied. Australia, Queensland, Redlynch, Crystal Creek, 12 females, 6 males from leaves of Uncaria lanosa (Rubiaceae), 5.xi.2008 (LAM 5192; DJT 789); Kuranda, 2 females from Grevillea baileyana, 7.xi.2008; Cairns, James Cook University Campus, 1 female from leaves of Euphorbiaceae tree, 3.xi.2008; Badu Island, 1 female, 1 male from grasses, 18.xi.2009.
description: Published as part of Mound, Laurence A. & Tree, Desley J., 2011, New records and four new species of Australian Thripidae (Thysanoptera) emphasise faunal relationships between northern Australia and Asia, pp. 35-48 in Zootaxa 2764 on page 45, DOI: 10.5281/zenodo.276839
Trichromothrips Priesner
Creators: name: Mound, Laurence A.
name: Tree, Desley J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Thysanoptera
Thripidae
Trichromothrips

description: Trichromothrips Priesner
Trichromothrips Priesner, 1930: 9. Type species Trichromothrips bellus Priesner
There are 33 species listed in this genus (Mound, 2011), almost all from tropical Asia, and an illustrated key to these was provided by Bhatti (2000). Four species are listed from Australia (Mound, 2008), but one of these is here deleted from the Australian list. Moreover, a few specimens taken in various parts of northern Australia are available in ANIC representing further unidentified species.
description: Published as part of Mound, Laurence A. & Tree, Desley J., 2011, New records and four new species of Australian Thripidae (Thysanoptera) emphasise faunal relationships between northern Australia and Asia, pp. 35-48 in Zootaxa 2764 on page 45, DOI: 10.5281/zenodo.276839
Trichromothrips xanthius Williams
Creators: name: Mound, Laurence A.
name: Tree, Desley J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Thysanoptera
Thripidae
Trichromothrips
Trichromothrips xanthius

description: Trichromothrips xanthius (Williams)
Taeniothrips xanthius Williams, 1917: 59
This species was recorded from Australia by Sakimura (1955: 597). However, this record was based solely on specimens intercepted in quarantine in North America. No specimens of the species are known from Australia, and there is currently no justification for listing it as occurring on this continent.
description: Published as part of Mound, Laurence A. & Tree, Desley J., 2011, New records and four new species of Australian Thripidae (Thysanoptera) emphasise faunal relationships between northern Australia and Asia, pp. 35-48 in Zootaxa 2764 on page 45, DOI: 10.5281/zenodo.276839
Tusothrips Bhatti
Creators: name: Mound, Laurence A.
name: Tree, Desley J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Thysanoptera
Thripidae
Tusothrips

description: Tusothrips Bhatti
Tusothrips Bhatti, 1967: 16 Type species Mycterothrips pseudosetiprivus Ramakrishna & Margabandhu
Species of the genus Tusothrips have 8-segmented antennae without a pair of dorso-apical setae on segment I; the head is small with ocellar setae pair I absent, but the mouth cone reaches the mesosternum; the transverse pronotum has two pairs of prominent posteroangular setae (Fig. 32); each abdominal tergum bears a broad craspedum on the posterior margin; sterna III–VI bear a craspedum of broad lobes, and sternal setae S1 and S2 are close together medially on VII (Fig. 31).
Six species are currently listed in this genus (Mound, 2011), but each of these is known from few specimens, and the character states on which they are distinguished may not be reliable. T. sumatrensis (Karny), the senior synonym of the type species of the genus, has a recorded range from India to the Philippines. This species and T. calopgomi (Zhang) from southern China are similar in having a dark marking transversely across the forewing, with the entire clavus equally dark; these two possibly represent the same species. In contrast, the forewings of the other four species are uniformly pale, or with only a weakly shaded mark. Amongst these, T. teinostomus Okajima from Thailand is distinct in having the sensorium on antennal segment VI with an elongate base, and Okajima (1990) also recorded this species from Indonesia and the Philippines. The published illustration of T. atrichotus Reyes, based on three females from the Philippines, implies that the sensorium on segment VI of that species has a narrow base, but recent examination of the holotype (in ANIC) has shown that the base of this sensorium is actually elongate. Therefore, T. atrichotus is here considered to be the same as T. teinostomus syn.n. In two species, T. immaculatus and T. setiprivus, the mesosternal furcal spinula is present, but in T. calopgomi and T. teinostomus this spinula is absent, whereas among the available specimens of T. sumatrensis this structure varies in its development.
description: Published as part of Mound, Laurence A. & Tree, Desley J., 2011, New records and four new species of Australian Thripidae (Thysanoptera) emphasise faunal relationships between northern Australia and Asia, pp. 35-48 in Zootaxa 2764 on page 45, DOI: 10.5281/zenodo.276839
Tusothrips setiprivus Karny
Creators: name: Mound, Laurence A.
name: Tree, Desley J.
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Thysanoptera
Thripidae
Tusothrips
Tusothrips setiprivus

description: Tusothrips setiprivus (Karny)
Mycterothrips setiprivus Karny, 1927: 200
This species was described from a single female taken in Coimbatore, India, and only one female, collected in West Bengal, has been recorded subsequently (Bhatti, 1978a). The two females listed below were identified as T. setiprivus after comparison with the holotype at the Senckenberg Museum, Frankfurt, and these new records considerably extend the known range of the species. T. immaculatus Reyes was described from three females taken at Mindanao, Philippines (Reyes, 1994). The description distinguished this by the presence of a few microtrichia laterally on the posterior margin of tergum VIII, and by the lack of a longitudinal split on tergum X. However, neither of these character states is adequately visible in the holotype of T. setiprivus because this is ventrally-mounted. The two females identified here as T. setiprivus have no microtrichia on the craspedum of tergum VIII, and there is a longitudinal split on tergum X. Recent examination of the holotype of T. immaculatus (in ANIC) has shown that tergum X has a similar dorsal longitudinal split, but that the posterior margin of tergum VIII bears two or three microtrichia on the craspedum near its lateral extremities. These two names possibly represent a single species, but the mouth cone of T. immaculatus appears to be considerably longer than that of T. setiprivus.
Material studied. Australia, Northern Territory, Coburg Peninsula, Smith Point, 1 female from dead twigs, 14.v.1999 (LAM 3698). Thailand, Chiang Mai Province, 1 female from Sida acuta, 6.viii.1999 (AD Wright).
description: Published as part of Mound, Laurence A. & Tree, Desley J., 2011, New records and four new species of Australian Thripidae (Thysanoptera) emphasise faunal relationships between northern Australia and Asia, pp. 35-48 in Zootaxa 2764 on page 47, DOI: 10.5281/zenodo.276839
UNRAVELING THE MOLECULAR FUNCTIONS OF PLANT VASCULAR TISSUES IN RESPONSE TO LOW-PHOSPHATE GROWTH CONDITIONS
Creators: name: Huang, Jing
Publisher: name: Purdue University Graduate School
Year: 2022
Subjects: classificationCode: 310806
subject: Plant physiology
classificationCode: 310803
subject: Plant cell and molecular biology

description:  
Phosphorus (P) is an essential macronutrient for plant growth and development. P deficiency is becoming one of the most limiting factors for crop productivity. It has been discovered that vascular tissue-mediated systemic signaling plays important roles in plant responses to P deficient growth conditions. In order to understand vascular tissue-specific molecular alterations in response to P deficiency, I used Plantago major as a model species to study the transcriptomic alterations in vascular tissues because it is fast and easy to dissect pure vascular tissues from this plant. I identified 237 differentially expressed genes involved in various roles to P deficiency, such as “phosphate metabolism and remobilization”, “sucrose metabolism, loading and synthesis” and “plant hormone metabolism and signal transduction”. In addition, translating ribosome affinity purification (TRAP) was used to identify 547 differentially expressed genes from the Arabidopsis vascular tissues. AtERF, one of the downregulated genes, was chosen for further functional characterization. My results demonstrated that AtERF is specifically expressed in vascular tissues and it encodes a transcription factor. Over-expression of AtERF led to a purple vein phenotype, decreased growth of shoots and roots, and reduced Pi concentrations in shoots and roots. The erf mutant plants displayed larger shoots and roots, and increased Pi concentration in shoots and roots. Molecular analysis in the over-expression and mutant plants showed that genes related to hormone metabolisms and root architecture establishment might be the major players enabling plants to cope with low P. The discoveries from this study may be used to implement strategies for the production of crops with increased P uptake efficiency.
MPEC 2024-X95 : 2008 XN
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2024
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
MPEC 2024-X96 : 2017 HC1
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2024
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
MPEC 2024-X97 : 2024 XC2
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2024
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469
subject: 2024 XC2

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
MPEC 2024-X98 : 2024 XD2
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2024
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469
subject: 2024 XD2

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
title: The association of socioeconomic status with the success of chat-based online counseling for children and youth
title: A latent change score modeling approach
titleType: Subtitle
Creators: name: Rarey, Franziska
name: Thomas, Julia
name: Berghöfer, Anne
name: Kuchinke, Lars
name: Meinlschmidt, Gunther
name: Rummel-Kluge, Christine
name: Wundrack, Richard
name: Ziegler, Matthias
Publisher: name: Humboldt-Universität zu Berlin
Year: 2024
Subjects: subject: Adolescence
subject: Latent change score modeling
subject: Online counseling
subject: SES
subject: 150 Psychologie

description: The article processing charge was funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – 491192747 and the Open Access Publication Fund of Humboldt-Universität zu Berlin.
description: Children and youth from lower subjective socioeconomic status (SES) backgrounds are at a heightened risk of mental disorders. Online counseling is a valuable tool to reach those less likely to seek professional help, but its success across different SES backgrounds remains unclear. This study explores the association between subjective SES and online counseling outcomes. Children and youth (N = 2139) between 10 and 24 years-of-age received chat-based online counseling and reported on SES, negative feelings before and after the chat, and perceived helpfulness of the chat via an online assessment tool. The results of a latent change score model showed a significant association between SES and negative feelings before chatting, indicating that lower SES predicted more negative feelings (r = −0.26, p < .001). Further, SES was indirectly associated with the change in negative feelings from before to after counseling, mediated by the extent of negative feelings before the chat (β = 0.07, 95%CFI = [0.05–0.10]). Current findings extend research on online counseling programs in the context of SES. Despite higher counseling needs among low SES individuals, they do not benefit proportionally from existing online services in this sample. Future research should investigate barriers to help-seeking and implement specialized counselor training programs.
Serpulidae Rafinesque 1815
Creators: name: Georgieva, Magdalena N.
name: Little, Crispin T. S.
name: Watson, Jonathan S.
name: Sephton, Mark A.
name: Ball, Alexander D.
name: Glover, Adrian G.
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Annelida
Polychaeta
Sabellida
Serpulidae

description: Family Serpulidae Rafinesque, 1815
‘Bexhaven tubes’
(Fig. 3)
Material. BXG, many small-diameter tubes occurring clustered together (Fig. 3A). Collected by C. T. S. Little.
Occurrence. Bexhaven locality, northern Hawke’s Bay area, east coast of North Island, New Zealand (~ 38 º 3 ' S, 178 º 5 ' E). Seep carbonates occurring as isolated lenses in mudstone, Bexhaven Limestone Formation, Tolaga Group, Middle Miocene (Campbell et al. 2008; Saether 2011).
Description. Carbonate tubes 0.5–1.9 mm in diameter, non-branching, somewhat sinuous (wavy) (Fig. 3A), and appearing to have been originally rigid as they demonstrate clean fractures (Fig. 3E). Tubes do not taper in the fragments observed. Tube wall surfaces exhibit numerous fine, parallel transverse wrinkles (Fig. 3B). Tubes are clearly attached to each other (Fig. 3C, D), and show chevron-like multi-layered tube wall structure (Fig. 3E), while in some cases the tube walls have been replaced (Fig. 3D). Tube walls do not appear to contain preserved organic matter (Fig. 25).
Remarks. The attachment exhibited by the tubes and the chevron-like structure of their walls clearly point to the tubes having been made by Serpulidae Rafinesque, 1815, and they are identified as such by both cluster and cladistic analyses (Figs 22, 24). The tube wall ornamentation of fine closely spaced transverse wrinkles is also seen in many members of this family (e.g. Serpula spp.). Serpulids have also tentatively been suggested to occur at the Haunui and Ugly Hill localities (Saether 2011).
description: Published as part of Georgieva, Magdalena N., Little, Crispin T. S., Watson, Jonathan S., Sephton, Mark A., Ball, Alexander D. & Glover, Adrian G., 2019, Identification of fossil worm tubes from Phanerozoic hydrothermal vents and cold seeps, pp. 287-329 in Journal of Systematic Palaeontology 17 (4) on page 294, DOI: 10.1080/14772019.2017.1412362, http://zenodo.org/record/10883381
Siboglinidae Caullery 1914
Creators: name: Georgieva, Magdalena N.
name: Little, Crispin T. S.
name: Watson, Jonathan S.
name: Sephton, Mark A.
name: Ball, Alexander D.
name: Glover, Adrian G.
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Annelida
Polychaeta
Sabellida
Siboglinidae

description: ?Family Siboglinidae Caullery, 1914
‘Murdock Creek tubes’
(Fig. 5)
Material. WA-MC LACMIP loc. 6295, one spiralling tube (Fig. 5A), another tube with a ~ 90 º bend, and a smaller tube observed in thin section only. Donated by J. L. Goedert.
Occurrence. Murdock Creek, Clallam County, Washington State, USA (~ 48 º 9 ' N, 123 º 52 ' W). Loose seep carbonate blocks. Pysht Formation, late Early Oligocene (Goedert & Squires 1993; Kiel & Amano 2013; Vinn et al. 2013).
Description. Carbonate tubes 0.7–3.0 mm in diameter, appearing non-branched, non-agglutinated and nontapering in the tube fragments observed. The spiralling tube (Fig. 5A) appears to have coarse longitudinal wrinkles on its surface, but whether these are original is uncertain. In thin section, tube walls are thick and concentrically multi-layered (Fig. 5B–D), and occasionally delaminated (Fig. 5B). Some of the tubes appear to have originally been flexible (Fig. 5C) and to have had fibrous walls due to visible preserved wall tears in thin section (Fig. 5D).
Remarks. These tubes appear to have been organic originally due to preserved tube wall tears that reveal a fibrous nature. The size of the tubes, their thick, multi-layered walls and the spiralling that they exhibit suggest that the tubes may have been made by vestimentiferans, as the combination of these features are not commonly encountered in other organic tube-building annelids that occur at vents and seeps. Due to a limited amount of material available for study, and as these tubes were only resolved among those of siboglinids when homoplastic characters are downweighted less within cladistic analyses (Fig. 23B), the tubes are only tentatively assigned to the siboglinids.
description: Published as part of Georgieva, Magdalena N., Little, Crispin T. S., Watson, Jonathan S., Sephton, Mark A., Ball, Alexander D. & Glover, Adrian G., 2019, Identification of fossil worm tubes from Phanerozoic hydrothermal vents and cold seeps, pp. 287-329 in Journal of Systematic Palaeontology 17 (4) on pages 296-297, DOI: 10.1080/14772019.2017.1412362, http://zenodo.org/record/10883381
NFFA-Europe Pilot - D15.5 - Implementation of user offer "correlative platform"
Creators: name: Dwivedi, Jagrati
name: Qiu, Canrong
name: Garrevoet, Jan
name: Falkenberg, Gerald
name: Van Malderen, Stijn
name: Stierle, Andreas
name: Suarez, Alexander
name: Castillo-Michel, Hiram
name: Belkhou, Rachid
name: Keller, Thomas F.
Publisher: name: Zenodo
Year: 2024

description: In this deliverable report 15.5, we introduce the "SMART" software platform, designed to provide animage registration-based tool for nanoparticle identification and re-localization. This advanced toolintegrates Discrete Fourier Transform (DFT) algorithms with real-time camera streaming for continuousmonitoring, and incorporates precise image registration and position refinement features. Tested at theX-ray beamline P06 at PETRA III, DESY, SMART aims to improve the interoperability between microscopy,spectroscopy, and imaging systems across lab-based and X-ray beamline facilities for users, and to permitcorrelative work flows.
description: WP15 - JA5 - Correlative Nano-Spectroscopy and Nano-Diffraction
Oxathres Bates 1864
Creators: name: Monné, Miguel A.
name: Tavakilian, Gerard Luc
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Oxathres

description: Oxathres Bates, 1864
Oxathres Bates, 1864: 50; Monné, 1976c: 585 (rev.); 2005: 112 (cat.).
Type-species: Oxathres navicula Bates, 1864 (Monné designation, 1976: 586).
The genus Oxathres Bates was revised by Monné (1976) and included descriptions of three new species. Since then another new species was described by Monné (1990) resulting in ten species in the genus. Oxathres belongs to the group of genera (Xylergates Bates, 1864, Proseriphus Monné, 2005, Brevoxathres Gilmour, 1959 and Sciadosoma Melzer, 1934) that share partially the following characters: setae in the surface of the elytra, upper lobes of the eyes separated one or two times the width of a lobe, elytra without centro-basal crista, lateral sides of the prothorax with tubercle or subrounded. In the genus Brevoxathres Gilmour, 1959 the upper lobes of the eyes are separated by three or more times the width of a lobe; in Sciadosoma Melzer, 1934, there is no visible ovipositor; in Proseriphus the setae in the surface of the elytra are mixed with green scales and in Xylergates there are three tubercles in the surface of the pronotum. Oxathres differs from the above genera by the upper lobes of the eyes separated one or two times the width of a lobe, elytra without green scales, the presence of a short ovipositor and pronotum without tubercles.
Most species of Oxathres were known from Brazil (Amazon basin and Atlantic Rainforest); in the present paper new species are described from French Guiana, Brazil and Bolivia.
description: Published as part of Monné, Miguel A. & Tavakilian, Gerard Luc, 2011, Synopsis of the genus Oxathres Bates (Coleoptera: Cerambycidae), pp. 20-28 in Zootaxa 2928 on pages 20-21, DOI: 10.5281/zenodo.278002
Siboglinidae Caullery 1914
Creators: name: Georgieva, Magdalena N.
name: Little, Crispin T. S.
name: Watson, Jonathan S.
name: Sephton, Mark A.
name: Ball, Alexander D.
name: Glover, Adrian G.
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Annelida
Polychaeta
Sabellida
Siboglinidae

description: ?Family Siboglinidae Caullery, 1914
‘West Fork Satsop River tubes’
(Fig. 4)
Material. JLG459C, WFSR-3B, several wavy tubes. WFSR-3A-1, several tubes observed in thin section. Donated by J. L. Goedert.
Occurrence. West Fork Satsop River, Grays Harbor County, Washington State, USA (~ 47 º 16 ' N, 123 º 33 ' W). Float seep limestone blocks. Lincoln Creek Formation, Oligocene (Campbell & Bottjer 1993; Kiel & Amano 2013).
Description. Carbonate tubes up to 2.4 mm in diameter, somewhat sinuous, non-branching, and not appearing to have been agglutinated or to taper in the observed fragments (Fig. 4A, B). Tubes appear inflexible and unattached, and the tube walls are free of ornamentation. In thin section, the tube walls are brown, of variable thickness but finely multi-layered (Fig. 4C, D). An originally organic composition of the tube walls is also supported by confocal microscopy (Fig. 25), and breaks in the tube wall can be observed showing potential frayed fibre endings (Fig. 4D).
Remarks. These tubes were resolved only within the cladistic analysis that allowed for more homoplasy (Fig. 23B), in which they fall among siboglinids. The fibrous organic composition and concentrically multi-layered walls are, however, also consistent with the tubes of chaetopterids, although the smooth walls and sinuosity of these tubes suggest that they are possibly more likely to have been made by siboglinids. We therefore tentatively suggest a siboglinid affinity.
description: Published as part of Georgieva, Magdalena N., Little, Crispin T. S., Watson, Jonathan S., Sephton, Mark A., Ball, Alexander D. & Glover, Adrian G., 2019, Identification of fossil worm tubes from Phanerozoic hydrothermal vents and cold seeps, pp. 287-329 in Journal of Systematic Palaeontology 17 (4) on pages 295-296, DOI: 10.1080/14772019.2017.1412362, http://zenodo.org/record/10883381
Siboglinidae Caullery 1914
Creators: name: Georgieva, Magdalena N.
name: Little, Crispin T. S.
name: Watson, Jonathan S.
name: Sephton, Mark A.
name: Ball, Alexander D.
name: Glover, Adrian G.
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Annelida
Polychaeta
Sabellida
Siboglinidae

description: ?Family Siboglinidae Caullery, 1914 (?vestimentiferan)
‘Omagari tubes’
(Fig. 8)
2003 possible vestimentiferan worm tubes Hikida, Suzuki, Togo, & Ijiri: 336, figs 3.1, 4.1, 4.4, 4.5, 5, 8.
Material. Many small, similar-diameter tubes preserved together. OMG03-4a, pinkish calcite with many worm tubes with brown walls (Fig. 8A, B). OMG03-4b, brown-walled tubes observed in thin section. OMG03-1, many tubes in muddy, crumbly matrix (Fig. 8C, D). OMG03-2, OMG03-3a, OMG03-3b, many tubes with light-coloured walls preserved in hard cement. Donated by Y. Hikida.
Occurrence. Omagari, Nakagawa-cho region, north-western Hokkaido, northern Japan (44 º 39.58 ' N, 142 º 2.22 ' E). Approximately 10 m wide seep carbonate deposit, Omagari Formation, Yezo Supergroup, Campanian, Cretaceous (Hikida et al. 2003; Majima et al. 2005; Kiel et al. 2008a).
Description. Non-agglutinated tubes, many of which are partially or fully replaced by silica or siderite, resulting in a dark brown-black or reddish colour, respectively. The tubes do not appear to be branching (Fig. 8A–D), and have walls that, where visible, appear smooth (Fig. 8B, D). Tube diameters range from 0.8 to 2.7 mm, and tubes do not appear to taper distinctly along their lengths. Tube walls are uncompressed, suggesting that they may have originally been rigid, and are multi-layered (Fig. 8E, F). Tube walls are generally not very thick, apart from in a subset of tubes in which the walls are thick and exhibit many layers (Fig. 8F). Preserved tears of the tube wall reveal an originally fibrous nature (Fig. 8G).
Remarks. These tubes were interpreted as those of vestimentiferans by earlier work (Hikida et al. 2003), but are difficult to identify owing to their lack of ornamentation. They fall among siboglinids when more homoplasy is permitted in the cladistic analysis (Fig. 23B). The tubes were clearly organic, due to preserved wall tears that reveal a fibrous nature. Transverse ornamentation typical of some frenulates or chaetopterids is absent, and the size and clumped nature of the tubes, combined with walls that are sometimes thick and neatly multi-layered, suggests that the Omagari tubes are most likely the roots/posterior portions of vestimentiferan tubes. The morphology of Omagari tube clumps very closely resembles a clump of the roots of the seep vestimentiferan Lamellibrachia luymesi (Fig. 8H, I). We therefore tentatively suggest that the Omagari tubes may be vestimentiferan tube roots.
description: Published as part of Georgieva, Magdalena N., Little, Crispin T. S., Watson, Jonathan S., Sephton, Mark A., Ball, Alexander D. & Glover, Adrian G., 2019, Identification of fossil worm tubes from Phanerozoic hydrothermal vents and cold seeps, pp. 287-329 in Journal of Systematic Palaeontology 17 (4) on pages 297-301, DOI: 10.1080/14772019.2017.1412362, http://zenodo.org/record/10883381
Siboglinidae Caullery 1914
Creators: name: Georgieva, Magdalena N.
name: Little, Crispin T. S.
name: Watson, Jonathan S.
name: Sephton, Mark A.
name: Ball, Alexander D.
name: Glover, Adrian G.
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Annelida
Polychaeta
Sabellida
Siboglinidae

description: ?Family Siboglinidae Caullery, 1914
‘Okukinenbetsu brown tubes’
(Fig. 9E–I)
Material. OKb4-3, larger tubes with brown walls largely obscured by rock matrix. Donated by F. Gill.
Occurrence. Okukinenbetsu River (Kanajirisawa Creek) seep carbonate, Obira-machi, north-western Hokkaido, northern Japan. Mudstone of Middle Ezo Group, Cenomanian, Cretaceous (Majima et al. 2005; Kaim et al. 2008; Kiel et al. 2008a).
Description. Large brown silicified tubes 3.7–4.3 mm in diameter, uncompressed in section (Fig. 9E) and with clear multi-layering (Fig. 9F–I) that is very thick and well consolidated in some of the tubes (Fig. 9I). Highly frayed edges can be seen, suggesting that tubes were originally organic and fibrous (Fig. 9F).
Remarks. The clear round transverse sections of the larger brown tubes suggests that the tubes were originally rigid. Their size may indicate that the inhabitants were not frenulates, while the structure of the tube wall indicates that they are more likely to have been made by siboglinids than chaetopterids due to the thick, well-consolidated multi-layering. These tubes fall among siboglinids when more homoplasy is permitted in the cladistic analyses (Fig. 23B); therefore, this affinity is only tentatively suggested.
description: Published as part of Georgieva, Magdalena N., Little, Crispin T. S., Watson, Jonathan S., Sephton, Mark A., Ball, Alexander D. & Glover, Adrian G., 2019, Identification of fossil worm tubes from Phanerozoic hydrothermal vents and cold seeps, pp. 287-329 in Journal of Systematic Palaeontology 17 (4) on page 301, DOI: 10.1080/14772019.2017.1412362, http://zenodo.org/record/10883381
Oxathres maculosa Monné & Tavakilian, 2011, sp. nov.
Creators: name: Monné, Miguel A.
name: Tavakilian, Gerard Luc
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Oxathres
Oxathres maculosa

description: Oxathres maculosa sp. nov.
(Fig. 6)
Description. Male. Integument dark-brown. Pubescence mainly grey-yellowish. Basal 1/3 of the antennomeres III – VI, VIII and X covered with white pubescence. Head with two parallel and approximate longitudinal yellowish lines from the anterior part of the frons to the occiput. Four patches of yellow-whitish pubescence in each side of the anterior and posterior margins, the patches in one specimen fused to form four longitudinal lines, alternating with brownish-black pubescence Elytra with three transverse fascia of dark-brown pubescence with irregular margins, the first in the basal 1/3, the second post-median and the last ante-apical.
Antennae reaching the apices of the elytra in the distal extreme of antennomere VII. Prothorax laterally armed with a post-median acute tubercle. Pronotum with a transverse row of punctures near the posterior margin. Elytra without longitudinal carinae near the suture; apices obliquely truncated, angles slightly produced. Surface densely punctured in the basal half, more scattered in the distal half. Apex of the fifth urotergite transversely truncated; fifth urosternite semicircularly emarginated.
Female. Antennae reaching the apices of the elytra in the distal extreme of antennomere X. Apex of the fifth urotergite acute; fifth urosternite semicircularly emarginated.
Measurements (mm), male/female. Total length, 7.0 – 8.5/7.3; prothorax length, 1.2 – 1.5/1.4; prothorax width, 2.0 – 2.6/2.3; elytral length, 5.1 – 6.4/5.3; humeral width, 2.5 – 3.2 /2.8.
Etymology. Latin, maculosa, allusive to the spots in the prothorax and elytra..
Type material. Holotype male, BOLIVIA, La Paz: Inquisivi (Plazuela), XII.1984, L. E. Peña G. col. (MNRJ). Paratypes: Santa Cruz: Provincia Florida, Chaco above Achira (1730 m), male, female, 22 – 25.I.2007, Wappes & Lingafelter col. (ACMT). Dept. Florida, Prov. Vicoquin, area above Achira, road to Amboró, (18°07’S, 63°47’W, 1730 m), 4 males, 22 – 25.I. 2007, Lingafelter, Wappes & Prena col. (3 males USNM, male, SLPC); Florida Prov., Refugio los Volcanes, (18°06’S, 63°36’W, 1045 m), female, 10 – 13.XII. 2008, S. Lingafelter, T. Henry & D. Windsor col. (SLPC); Florida Prov., Achira Resort, 7 km NE of Samaipata, (18°09’S, 63°49’W, 1350 m), male, 22 – 25.I.2007, Lingafelter, Wappes & Prena col. (SLPC).
Comments. O. maculosa sp. nov. can be recognized by the pronotum with alternate longitudinal lines of yellow and black pubescence
description: Published as part of Monné, Miguel A. & Tavakilian, Gerard Luc, 2011, Synopsis of the genus Oxathres Bates (Coleoptera: Cerambycidae), pp. 20-28 in Zootaxa 2928 on pages 24-25, DOI: 10.5281/zenodo.278002
Siboglinidae Caullery 1914
Creators: name: Georgieva, Magdalena N.
name: Little, Crispin T. S.
name: Watson, Jonathan S.
name: Sephton, Mark A.
name: Ball, Alexander D.
name: Glover, Adrian G.
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Annelida
Polychaeta
Sabellida
Siboglinidae

description: Family Siboglinidae Caullery, 1914 (vestimentiferan)
‘Troodos wrinkled tubes’
(Fig. 10D, E)
1999a vestimentiferan worm tubes Little, Cann, Herrington, & Morisseau: 1028, fig. 2e.
Material. Kambia 4051, 4061, 6061, t3; Kapedhes 204b, 2101, worm tubes with walls ornamented by transverse and longitudinal wrinkles. Collected by C. T. S. Little.
Occurrence. Massive sulphide deposits. Troodos Ophiolite, Cyprus. Turonian, Late Cretaceous (Oudin & Constantinou 1984; Little et al. 1999a).
Description. Generally straight or slightly curving pyritic tubes 1.2–4.5 mm in diameter, which do not show signs of having been flexible and are not attached to other tubes (Fig. 10D, E). Whether tubes taper cannot be assessed with certainty due to the short length of preserved fragments. Tubes do not have collars, and instead possess fine transverse and longitudinal wrinkles on their surfaces, with the transverse wrinkles often being more pronounced and fairly regular (Fig. 10D). Longitudinal wrinkles are fine and occasionally bifurcating (Fig. 10E). One tube specimen has a smaller tube preserved within it.
Remarks. These tubes are resolved among siboglinids by both cladistic and cluster analyses (Figs 22–24), as a result of the fine, bifurcating longitudinal wrinkles as well as the fine transverse wrinkles which they possess. The features above are not observed on serpulid tubes, which sometimes possess coarse longitudinal wrinkles. The longitudinal wrinkles of chaetopterid tubes are often coarser (Kiel & Dando 2009), and have not been observed to be crosscut by fine transverse wrinkles. We therefore suggest that the most likely builders of these tubes are vestimentiferans, which do exhibit such ornamentation patterns (cf. Ridgeia piscesae tubes, Fig. 15G).
description: Published as part of Georgieva, Magdalena N., Little, Crispin T. S., Watson, Jonathan S., Sephton, Mark A., Ball, Alexander D. & Glover, Adrian G., 2019, Identification of fossil worm tubes from Phanerozoic hydrothermal vents and cold seeps, pp. 287-329 in Journal of Systematic Palaeontology 17 (4) on pages 303-304, DOI: 10.1080/14772019.2017.1412362, http://zenodo.org/record/10883381
Oxathres erotyloides Bates 1864
Creators: name: Monné, Miguel A.
name: Tavakilian, Gerard Luc
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Oxathres
Oxathres erotyloides

description: Oxathres erotyloides Bates, 1864
(Fig. 1)
Oxathres erotyloides Bates, 1864: 51; Monné, 2005: 112 (cat.).
Described from Tefé (= Ega), Amazonas, Brazil, and known from Ecuador, Peru and Brazil (Amazonas). The lateral sides of the prothorax are subrounded, at least in males, the only sex known.
description: Published as part of Monné, Miguel A. & Tavakilian, Gerard Luc, 2011, Synopsis of the genus Oxathres Bates (Coleoptera: Cerambycidae), pp. 20-28 in Zootaxa 2928 on page 21, DOI: 10.5281/zenodo.278002
Anaulacomera (Anallomes) Scudder 1875
Creators: name: Fianco, Marcos
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Phaneropteridae
Anaulacomera

description: Anaulacomera (Anallomes) Scudder, 1875
Type species: Anallomes maranona Scudder, S.H. (= Anaulacomera nodulosa), by subsequent designation.
description: Published as part of Fianco, Marcos, 2021, Nine new species of the Anaulacomerina subtribe of katydids (Orthoptera Tettigoniidae: Phaneropterinae: Phaneropterini) from Brazil, pp. 33-54 in Zootaxa 4952 (1) on page 36, DOI: 10.11646/zootaxa.4952.1.2, http://zenodo.org/record/4671657
Oxathres proxima Monne 1976
Creators: name: Monné, Miguel A.
name: Tavakilian, Gerard Luc
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Oxathres
Oxathres proxima

description: Oxathres proxima Monné, 1976
(Fig. 7)
Oxathres proxima Monné, 1976: 587; 2005: 113 (cat).
Known only by the female holotype from Satipo, Junin, Peru. Similar to O. navicula by the form of the prothorax and by the colour of the pubescence, but differs by the dense yellowish pubescence covering the sides of the prothorax and the basal half of the elytra. In O. navicula the pubescence of the prothorax is sparse and in the elytra is arranged in several longitudinal rows.
description: Published as part of Monné, Miguel A. & Tavakilian, Gerard Luc, 2011, Synopsis of the genus Oxathres Bates (Coleoptera: Cerambycidae), pp. 20-28 in Zootaxa 2928 on page 25, DOI: 10.5281/zenodo.278002
Anaulacomera (Anaulacomera) Stal 1873
Creators: name: Fianco, Marcos
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Phaneropteridae
Anaulacomera

description: Anaulacomera (Anaulacomera) Stål, 1873
Type species: Phaneroptera submaculata Stål, 1861 by subsequent designation.
description: Published as part of Fianco, Marcos, 2021, Nine new species of the Anaulacomerina subtribe of katydids (Orthoptera Tettigoniidae: Phaneropterinae: Phaneropterini) from Brazil, pp. 33-54 in Zootaxa 4952 (1) on page 37, DOI: 10.11646/zootaxa.4952.1.2, http://zenodo.org/record/4671657
Oxathres boliviana Monné & Tavakilian, 2011, sp. nov.
Creators: name: Monné, Miguel A.
name: Tavakilian, Gerard Luc
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Cerambycidae
Oxathres
Oxathres boliviana

description: Oxathres boliviana sp. nov.
(Fig. 9)
Description. Male. Integument dark-brown. Pubescence predominantly dark-brown. Pubescence whitish as follows: seven minute rounded spots in the pronotum, four near the anterior margin and two or three near the posterior margin and two sets of longitudinal lines formed by minute spots in the middle of the elytra and in the distal third.
Antennae reaching the apices of the elytra in the distal extreme of antennomere V. Prothorax with acute lateral tubercle in the beginning of the posterior third. Pronotum with a transverse row of punctures near the anterior and posterior margins. Elytra without longitudinal carinae near the suture; apices transversely truncated, angles not produced. Surface densely punctured in the basal two thirds, more scattered in the distal third. Apex of urotegite and urosternite shallowly semicircularly emarginated.
Female. Antennae attaining the apices of the elytra approximately in the distal extremity of antennomere VII; ovipositor projecting 0.7 mm beyond the elytral apices, urotergite acute, urosternite transversely truncated.
Measurements (mm), male/female. Total length, 6.9/7.0; prothorax length, 1.2/1.2; prothorax width, 2.0/2.0; elytral length, 4.7/5.0; humeral width, 2.7/2.7.
Etymology. boliviana, allusive to the name of the country where the material was collected.
Type material. Holotype male, BOLIVIA, Santa Cruz: 3.7 km SSE Buena Vista (Hotel Flora & Fauna), 15 – 22.XI.2001, B. K. Dozier col. (MNKM). Paratype female, same data. (ACMT), 4 – 6 km SSE Buena Vista (Hotel Flora & Fauna), male, 21 – 24.XI. 2003, Wappes, Morris & Nearns col. (MNRJ), same locality and collectors, female, 14 – 17.X.2003 (FSCA), same locality, male, 21 – 24.XI.2003, Wappes, Morris & Nearns col. (ACMT), female, 16 – 30.XI.2002, R. Clarke col. (ACMT), female, 1 – 15 XII.2002, R. Clarke col. (ACMT), female, 21 – 25.XII.2002, R. Clarke col. (FSCA), female, 1 – 8.XII.2003, R. Clarke col (USNM). Provincia Florida, Chaco above Achira (1730 m), male, female, 22 – 25.I.2007, Wappes & Lingafelter col. (ACMT).
Comments. In one paratype male the white spots in the elytra are almost imperceptible.
description: Published as part of Monné, Miguel A. & Tavakilian, Gerard Luc, 2011, Synopsis of the genus Oxathres Bates (Coleoptera: Cerambycidae), pp. 20-28 in Zootaxa 2928 on pages 25-26, DOI: 10.5281/zenodo.278002