cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Early life history dynamics of rainbow trout in a large regulated river
Creators: name: Korman, Josh
Publisher: name: University of British Columbia
Year: 2009

description: The central objective of this thesis is to better understand early life history dynamics of salmonids in large regulated rivers. I studied spawning, incubating, and age-0 life stages of rainbow trout in the Lee’s Ferry reach of the Colorado River below Glen Canyon Dam, AZ. My first objective was to evaluate the effects of hourly fluctuations in flow on nearshore habitat use and growth of age-0 trout. Catch rates in nearshore areas were at least 2- to 4-fold higher at the daily minimum flow compared to the daily maximum and indicated that most age-0 trout do not maintain their position within immediate shoreline areas during the day when flows are high. Otolith growth increased by 25% on Sundays in one year of study, because it was the only day of the week when flows did not fluctuate. My second objective was to evaluate the effects of flow fluctuations on survival from fertilization to a few months from emergence (early survival). Fluctuations were predicted to result in incubation mortality rates of 24% in 2003 and 50% in 2004, when flow was experimentally manipulated to reduce trout abundance, compared to 5% in 2006 and 11% in 2007 under normal operations. Early survival increased by over 6-fold in 2006 when egg deposition decreased by at least 10-fold. Because of this strong compensatory dynamic, flow-dependent incubation mortality in experimental years was likely not large enough to reduce the abundance of age-0 trout. My final objective was to determine how flow, fish size and density effects habitat use, growth, and survival of age-0 trout. Apparent survival rates from July to November were 0.18 (2004), 0.19 (2006), and 0.32 (2007). A stock synthesis model was developed to jointly estimate parameters describing early life history dynamics, and indicated that early survival was lower for cohorts fertilized during the first half of the spawning period and was negatively correlated with egg deposition, that movement of age-0 trout from low- to high-angle shorelines increased with fish size, and that survival varied by habitat type and over time in response to flow changes from Glen Canyon Dam.
Additional file 1: of Applied immuno-epidemiological research: an approach for integrating existing knowledge into the statistical analysis of multiple immune markers
Creators: name: Genser, Bernd
name: Fischer, Joachim
name: Figueiredo, Camila
name: Neuza AlcĂ˘Ntara-Neves
name: Barreto, Mauricio
name: Cooper, Philip
name: Amorim, Leila
name: Saemann, Marcus
name: Weichhart, Thomas
name: Rodrigues, Laura
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: Computational Biology

description: Table S1. Distributions of recoded ordinal cytokine data (818 children from SCAALA Salvador). Table S2. Bivariate association analysis for IL-13 responsiveness produced under different culture conditions in vitro using data collected from 818 children in SCAALA Salvador. Table S3. Comparison of statistical approaches used to model the effect of cytokine concentrations on the outcome sIgE (maximum concentration of five antigens). Figure S1. Boxplots of cytokine concentrations (in pg/ml) obtained from different cell cultures (N=818 children from SCAALA Salvador). Figure S2. Intra-cytokine analysis: Correspondence pattern among IL-13 measures. Figure S3. Th2 inter-cytokine analysis: correspondence analysis biplots IL-5 vs. IL-13. Figure S4. Correspondence analysis biplots Th2 response and Th1/Th2 balance vs. T-Reg response. (DOCX 332 kb)
Telehealth language assessment (Campbell et al., 2024)
Creators: name: Campbell, Deborah R.
name: Lawrence, Jennella E.
name: Goldstein, Howard
Publisher: name: ASHA journals
Year: 2024
Subjects: classificationCode: 420110
subject: Speech pathology
classificationCode: 470402
subject: Child language acquisition
classificationCode: 420321
subject: Rural and remote health services

description: Purpose: Despite the speed with which telehealth use advanced during the COVID-19 pandemic, evidence is needed to support the remote delivery of standardized assessments. This study investigated the reliability and feasibility of administering a standardized language assessment administered in real-world telehealth scenarios compared to in-person administration.Method: A total of 100 children between the ages of 3 and 12 years were administered one of three versions of the Clinical Evaluation of Language Fundamentals (CELF). Children were administered the CELF by the same licensed speech-language pathologists (SLPs) in person and using telehealth, with the order counterbalanced. Means for Core Language standard scores were compared between conditions and among devices. Descriptive statistics summarized the behavior and technology disruptions during administration as well as the results of parent and SLP telehealth perception surveys.Results: In-person and telehealth mean scores on all three versions of the CELF revealed no systematic differences of one condition under- or overestimating another. The incidence of child behavior disruptions was similar for both test administration conditions. Adaptations compensated for the rare technology disruptions. Despite no significant language score and behavior differences between testing conditions, parents reported they continued to prefer in-person assessments. SLP participants viewed telehealth overall positively but identified conditions in which they continued to prefer in-person delivery.Conclusions: This study provides evidence of minimal or no differences in scores and behavioral or technological disruptions between remote and in-person administration of the CELF core language assessments. SLP and parent participants’ attitudes toward remote delivery of standardized tests appear to be evolving in a positive direction compared to previous studies.Supplemental Material S1. Test Session Summary Sheet.Campbell, D. R., Lawrence, J. E., & Goldstein, H. (2024). Reliability and feasibility of administering a child language assessment via telehealth. American Journal of Speech-Language Pathology, 33(3), 1373–1389. https://doi.org/10.1044/2024_AJSLP-23-00182
Valorization of Coffee Silverskin Using Extraction Cycles and Water as a Solvent: Design of Process
Creators: name: Chemat, Aziadé
name: Touraud, Didier
name: Müller, Rainer
name: Kunz, Werner
name: Fabiano-Tixier, Anne-Sylvie
Publisher: name: Universität Regensburg
Year: 2024
Subjects: subject: coffee; silverskin; extraction; water; cycles; enrichment
subject: 540 Chemie

description: Coffee silverskin is a byproduct of the coffee industry, appearing in large quantities during the roasting step. In this work, a sober and simple water process is proposed, using extractions cycles, to produce valuable products including (a) an extract rich in caffeine, (b) possibly pure caffeine, and (c) insoluble fibers. The hypothetical number of necessary cycles was calculated and compared to the number of cycles used experimentally. Two types of cycles, with and without water compensation, were compared for their water consumption and the amount of caffeine extracted. The use of cycles, with the resulting product from a previous extraction as a solvent for fresh biomass, drove a significant rise in the content of caffeine determined by a UV–visible detector with a spectrophotometer and ultra-performance liquid chromatography (UPLC). After 11 extraction cycles with water compensation, we obtained an extract 4.5 times more concentrated in caffeine (4.25 mg/mL) than after a single extraction (1.03 mg/mL).
Additional file 1: of The impact of an 8-year mass drug administration programme on prevalence, intensity and co-infections of soil-transmitted helminthiases in Burundi
Creators: name: Ortu, Giuseppina
name: Assoum, Mohamad
name: Wittmann, Udo
name: Knowles, Sarah
name: Clements, Michelle
name: Ndayishimiye, Onésime
name: Maria-Gloria Basáñez
name: Lau, Colleen
name: Clements, Archie
name: Fenwick, Alan
name: Magalhaes, Ricardo
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases
subject: Computational Biology

description: Table S1. Sample sizes and numbers of pupils followed up by year for the impact study conducted in Burundi from 2007 to 2011. Figure S1. Semivariograms representing the prevalence of Ascaris lumbricoides and Trichuris trichiura coinfection from 2007 to 2011. Figure S2. Variation in temporal patterns of prevalence change across pilot study sentinel sites in Burundi between 2007 and 2011, and in 2014 based on the models presented in Table 4. Figure S3. Variation in temporal patterns of prevalence change across extension study sentinel sites in Burundi between 2007 and 2011, and in 2014 based on the models presented in Table 5. Figure S4. Semivariograms representing the prevalence of low infection intensity from 2007 to 2014 for Ascaris lumbricoides. Figure S5. Semivariograms representing the prevalence of moderate infection intensity from 2007 to 2014 for Ascaris lumbricoides. Figure S6. Semivariograms representing the prevalence of low infection intensity from 2007 to 2014 for Trichuris trichiura. Figure S7. Semivariograms representing the prevalence of low infection intensity from 2007 to 2014 for hookworm. (DOCX 3548 kb)
LitTerra, Bukvik, and ColaboFlow - An AI augmented workflow platform for "solidifying" the hybrid creative processes in Digital Humanities
Creators: name: Rudan, Sasha Mile
name: Rudan, Sinisa
name: Kovacevic, Lazar
Publisher: name: Zenodo
Year: 2024
Subjects: workflows
solidification
AI augmentation
BPMN
hybrid reading
DH
research reproducibility

description: In this paper, we evaluate usage of workflows in the domain of digital humanities (DH), primarily in the hybrid

(a fusion of distant and close reading) multi-lingual reading practices. We present the ColaboFlow (a work-

flow framework) in the context of LitTerra platform that supports this kind of DH practices. ColaboFlow is

integrated in LitTerra through its specialization Bukvik. In other words, Bukvik is an instance of ColaboFlow

that supports common research workflows addressing distant reading, stylometry and parallel multilingual

corpora. Through practical context of LitTerra and Bukvik, we explore the requirements ColaboFlow as a

workflow framework and platform needs to provide both from the perspective of reproducible DH research

and from the perspective of the creative processes digitalization. We argue that workflows as inherent enablers

of reproducible research are critical for keeping human-on-the-top, where in the addition to the human-in-

the-loop there is an eaim of keeping them at the top of human+AI symbiotic research and decision making

process. We present and argue the key features in ColaboFlow and LitTerra that contributes to abovementioned

goals. Having that identified, we address the process of ”solidification” which transforms the declarative cre-

ative process (or work) into a solid, executable, and reproducible workflow. We augment solidification with

semantically decorated workflow artefacts (tasks and datasets primarily) and with the help of generactive AI.

The solidified workflows are placed in the ColaboFlow framework and evaluated how they can be used in the

LitTerra platform. We argue that the presented approach helps keeping human in the loop, it documents and

clarifies the creative process and work, and enables the trasparency of the created workflows, and the possi-

bility of ongoing collaborative and AI interventions on them, and their reproducible execution in distributed

environment. Finally, we evaluate the solidification process and the ColaboFlow framework through both hu-

man generated data and partially sintetic data generated from human-generated data.
Additional file 1 of Onset of Type 2 diabetes in adults aged 50 and older in Europe: an intersectional multilevel analysis of individual heterogeneity and discriminatory accuracy
Creators: name: O’Sullivan, Julie Lorraine
name: Alonso-Perez, Enrique
name: Färber, Francesca
name: Fuellen, Georg
name: Rudolf, Henrik
name: Heisig, Jan Paul
name: Kreyenfeld, Michaela
name: Gellert, Paul
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Environmental Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Supplementary Material 1
Additional file 1 of Comparison of mortality and cardiovascular complications due to COVID-19, RSV, and influenza in hospitalized children and young adults
Creators: name: Khanal, Sagya
name: Khanal, Bishes
name: Chou, Fu-Sheng
name: Moon-Grady, Anita J.
name: Ghimire, Laxmi V.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Biotechnology
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Mental Health
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology
subject: Computational Biology

description: Supplementary Material 1.
Additional file 1: Table S1. of Urinary metabolomics of young Italian autistic children supports abnormal tryptophan and purine metabolism
Creators: name: Gevi, Federica
name: Zolla, Lello
name: Gabriele, Stefano
name: Persico, Antonio
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Marine Biology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Computational Biology

description: Demographic and clinical characteristics of the autistic sample (N = 30, unless otherwise specified). Typically developing controls were tightly sex- and age-matched, with M:F = 22–8, age 5.03 ± 0.32 years, and no clinical evidence of ASD-related DSM-IV diagnoses or intellectual disability. (DOCX 21 kb)
LitTerra, Bukvik, and ColaboFlow - An AI augmented workflow platform for "solidifying" the hybrid creative processes in Digital Humanities
Creators: name: Rudan, Sasha Mile
name: Rudan, Sinisa
name: Kovacevic, Lazar
Publisher: name: Zenodo
Year: 2024
Subjects: workflows
solidification
AI augmentation
BPMN
hybrid reading
DH
research reproducibility

description: In this paper, we evaluate usage of workflows in the domain of digital humanities (DH), primarily in the hybrid (a fusion of distant and close reading) multi-lingual reading practices. We present the ColaboFlow (a workflow framework) in the context of LitTerra platform that supports this kind of DH practices. ColaboFlow is integrated in LitTerra through its specialization Bukvik. In other words, Bukvik is an instance of ColaboFlow that supports common research workflows addressing distant reading, stylometry and parallel multilingual corpora. Through practical context of LitTerra and Bukvik, we explore the requirements ColaboFlow as a workflow framework and platform needs to provide both from the perspective of reproducible DH research and from the perspective of the creative processes digitalization. We argue that workflows as inherent enablers of reproducible research are critical for keeping human-in-the-loop or rathet \emph{human-on-the-loop}, where in the addition to the human-in-the-loop there is an aim of keeping them at the top of human+AI symbiotic research and decision making process. We presentx and argue the key features in ColaboFlow and LitTerra that contributes to abovementioned goals. Having that identified, we address the process of \emph{"solidification"} which transforms the declarative creative process (or work) into a solid, executable, and reproducible workflow. We augment solidification with semantically decorated workflow artefacts (tasks and datasets primarily) and with the help of generactive AI. The solidified workflows are placed in the ColaboFlow framework and evaluated how they can be used in the LitTerra platform. We argue that the presented approach helps keeping human in the loop, it documents and clarifies the creative process and work, and enables the trasparency of the created workflows, and the possibility of ongoing collaborative and AI interventions on them, and their reproducible execution in distributed environment. Finally, we evaluate the solidification process and the ColaboFlow framework through both human generated data and partially sintetic data generated from human-generated data.
Additional file 1: of Ischemic heart disease among subjects with and without chronic obstructive pulmonary disease – ECG-findings in a population-based cohort study
Creators: name: Nilsson, Ulf
name: Johansson, Bengt
name: Berne Eriksson
name: Blomberg, Anders
name: Lundbäck, Bo
name: Lindberg, Anne
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Basic characteristics, reported respiratory symptoms and comorbidities of all subjects ( n  = 1625), comparing non-COPD and COPD. (PDF 163 kb)
Additional file 1 of Exploring the educational journey: perspectives of ethnic minority GP-trainees in Dutch GP-specialty training - a qualitative interview study
Creators: name: van Moppes, N.M
name: Nasori, M.
name: Jorissen, A.C.
name: van Es, J.M.
name: Bont, J.
name: Visser, M.R.M.
name: van den Muijsenbergh, M.E.T.C.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Supplementary Material 1.
Additional file 1: of Measuring safety climate in acute hospitals: Rasch analysis of the safety attitudes questionnaire
Creators: name: Sze-Ee Soh
name: Barker, Anna
name: Morello, Renata
name: Dalton, Megan
name: Brand, Caroline
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Safety climate survey administered to nursing staff (DOCX 41 kb)
Additional file 2: of Ischemic heart disease among subjects with and without chronic obstructive pulmonary disease – ECG-findings in a population-based cohort study
Creators: name: Nilsson, Ulf
name: Johansson, Bengt
name: Berne Eriksson
name: Blomberg, Anders
name: Lundbäck, Bo
name: Lindberg, Anne
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Biotechnology
subject: Marine Biology

description: Ischemic ECG changes in all subjects ( n  = 1625), comparing non-COPD and COPD. (PDF 92 kb)
The Seven Seals of Judeo-Islamic Magic: Possible Origins of the Symbols
Creators: name: Graham, Lloyd
Publisher: name: Academia.edu
Year: 2012
Subjects: subject: Amulets (Islam)
subject: Talismans
subject: Charms
subject: Islamic magic
subject: Sufism
subject: Amulets (Judaism)

description: The Seven Seals of medieval Islamic magic, which are believed to constitute the Greatest Name of God, also feature in Jewish Kabbalah from the same period. While many Seal symbols make sporadic appearances in early Islamic amulets bearing Kufic script, the source of the symbols and their eventual ordering remains a matter of legend. As this topic was first – and last – examined systematically by Dr. Hans Winkler in 1930, a wider-ranging and more modern review is long overdue. The present survey focuses on potential sources for the symbols rather than on their exegesis. It first examines the possibility that a precedent for the Seal series exists in an undecipherable "seven signs repeated seven times" inscribed on a Late Babylonian amulet. It then considers the possibility that the Seals' origins lie in other cuneiform symbols from ancient Mesopotamia; in Egyptian hieroglyphs or scripts; in paleo-Hebrew characters or the letters of ancient South Arabian scripts; in Libyco-Berber or Tifinagh letters from North Africa; or in the symbol repertoire of Late Antique magic, including the highly potent seven Greek vowels. The review also explores the possibility that at least some of the symbols originated in numerological ciphers or religious emblems, canvassing sources as diverse as Indian Hinduism and Byzantine Christendom. The article concludes by considering the recent suggestion that the Seal series may have acquired its privileged status because its symbols reflect "shape archetypes" that are hard-wired into the human nervous system.
Additional file 1 of Three-dimensional digital imaging analysis of the palatal bone thickness for orthodontic mini-implant insertion – determination of the safe zone and angulation
Creators: name: Schubert, Hanna
name: Matta, Ragai
name: Seidel, Anna
name: Adler, Werner
name: Wichmann, Manfred
name: Kesting, Marco
name: Lutz, Rainer
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Space Science
subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Hematology

description: Supplementary Material 1
Sexualität selbstbestimmt in ihrer Vielfalt leben
Creators: name: Hamm, Marianne
Publisher: name: Hochschulbibliothek, Hochschule Merseburg
Year: 2019
Subjects: subject: sexuelle Bildung
subject: geschlechtliche Vielfalt
subject: Safer Sex
subject: Parcour
subject: DDC::300 Sozialwissenschaften::300 Sozialwissenschaften, Soziologie::302 Soziale Interaktion

description: Konzeption eines Parcours für Jugendliche und junge Erwachsene zu den Themen Safer Sex sowie sexuelle und geschlechtliche Vielfalt
Hand Gesture Control Robot
Creators: name: Rohan V, Sai Sudheer K, Shreedhar Chandrashekar Malagamani, Dhineshbabu N R
Publisher: name: Zenodo
Year: 2024

description: The field of robotics has witnessed significant advancements through the integration of IoT and gesturerecognition technologies. IoT-based hand gesture control robots offer intuitive interaction methods applicableto various domains, including assistive technologies, industrial automation, and remote exploration. This paperpresents a comprehensive review of the state-of-the-art in this area, focusing on gesture recognition techniques,IoT integration frameworks, robotic platforms, and their applications. Key challenges, such as latency, accuracy,and environmental limitations, are also discussed, along with future research directions.
Neoechinorhynchus (Neoechinorhynchus) macronucleatus Machado Filho 1954
Creators: name: Arredondo, Nathalia J.
name: Gil de Pertierra, Alicia A.
Publisher: name: Zenodo
Year: 2012
Subjects: Biodiversity
Taxonomy
Animalia
Acanthocephala
Eoacanthocephala
Neoechinorhynchida
Neoechinorhynchidae
Neoechinorhynchus
Neoechinorhynchus macronucleatus

description: Neoechinorhynchus (Neoechinorhynchus) macronucleatus Machado Filho, 1954
Figs 11, 14, 17
MATERIAL STUDIED: MANC-Pa No. 518/1-2 (2 females) from Lycengraulis grossidens; Paraná-Guazú River, Entre Ríos Province, Argentina.
REMARKS: Machado Filho (1954) briefly described this species from the intestine of Licengraulis sp. from Brazil. Later, Fabio (1983) recorded one male specimen from Hoplias malabaricus (Bloch, 1794) also from Brazil. In Argentina, only five juvenile females were recovered from L. grossidens. The specimens are easily recognized because they have a cylindrical proboscis, the hooks of the anterior circle larger and stouter than the hooks in the middle and posterior circles, four prominent giant nuclei pre-equatorially situated in the dorsal body wall and lemnisci much longer than the proboscis receptacle.
In addition, minor differences were recorded in the measures of some characters while others were recorded for the first time: proboscis 110-135 (n = 2) long, 95- 110 wide; length of hooks in anterior circle 40-50 (45; n = 4), in middle circle 25-35 (30; n = 4), in posterior circle 15-25 (20; n = 4); length of hook roots in anterior circle 40-50 (45; n = 4), in middle circle 5-15 (10; n = 3), in posterior circle 5 (n = 3); apical organ 65-75 (n = 2) long, 25 wide; proboscis receptacle 435-560 (n = 2) long, 110-125 wide; cerebral ganglion oval-shaped, situated near posterior end of receptacle 105-130 (n = 2) long, 50-65 wide (Figs 11, 14, 17). The presence of an apical organ, cerebral ganglion and roots of hooks in middle and posterior circle are recorded for the first time, and this is the first study of N. (N.) macronucleatus using SEM.
description: Published as part of Arredondo, Nathalia J. & Gil de Pertierra, Alicia A., 2012, A new species of Neoechinorhynchus (Eoacanthocephala: Neoechinorhynchidae) from Pachyurus bonariensis (Perciformes: Sciaenidae) from the Paraná River basin in Argentina, with comments on two other species of the genus, pp. 425-439 in Revue suisse de Zoologie 119 (4) on page 432, DOI: 10.5962/bhl.part.150202, http://zenodo.org/record/5828663
Modern Physics for Engineers Lecture slides 16b – Binomial distribution and Stirling’s approximation
Creators: name: Miller, David
Publisher: name: Stanford Digital Repository
Year: 2025
Subjects: Binomial distribution
Stirling's approximation
Statistical mechanics

description: This lecture part introduces the binomial distribution as the formal description useful for discussing distributions of "heads" and "tails", for example. It then introduces Stirling's approximation, which is very useful for large numbers of particles (or coin tosses), and leads to simple formulas. This also gives simple results for how wide we expect the distribution (of multiplicities) to be. (slides)
Additional file 4: of The application of heterogeneous cluster grouping to reflective writing for medical humanities literature study to enhance studentsâ   empathy, critical thinking, and reflective writing
Creators: name: Hung-Chang Liao
name: Ya-Huei Wang
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Science Policy
subject: 60506 Virology
subject: FOS: Biological sciences

description: Critical Thinking Disposition Assessment (CTDA-R). Pre- (self-report items only) and post-test (all items). http://dx.doi.org/ 10.2224/sbp.2014.42.2.303 . (DOCX 15Â kb)
Additional file 1 of The effects of sildenafil citrate on intrauterine growth restriction: a systematic review and meta-analysis
Creators: name: Rakhanova, Yenlik
name: Almawi, Wassim Y.
name: Aimagambetova, Gulzhanat
name: Riethmacher, Dieter
Publisher: name: figshare
Year: 2024
Subjects: Medicine
Cell Biology
Biological Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified
Developmental Biology
Science Policy

description: Additional file 1: Supplementary Table 1. List of studies retrieved for analysis.
Pycnoscelus indicus
Creators: name: Gupta, Sunil Kumar
name: Chandra, Kailash
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Blattodea
Blaberidae
Pycnoscelus
Pycnoscelus indicus

description: 30. Pycnoscelus indicus (Fabricius, 1775)
Blatta indica Fabricius, 1775: 272.
References. Princis, 1964: 270; Prabakaran & Senraj, 2018b: 5.
Distribution. India.
Depository. ZMUC.
description: Published as part of Gupta, Sunil Kumar & Chandra, Kailash, 2019, An annotated checklist of cockroaches (Blattodea) from India, pp. 461-497 in Zootaxa 4614 (3) on page 468, DOI: 10.11646/zootaxa.4614.3.3, http://zenodo.org/record/3243068
Additional file 1 of A micro-costing study of mass-spectrometry based quantitative proteomics testing applied to the diagnostic pipeline of mitochondrial and other rare disorders
Creators: name: Santos Gonzalez, Francisco
name: Hock, Daniella H.
name: Thorburn, David R.
name: Mordaunt, Dylan
name: Williamson, Nicholas A.
name: Ang, Ching-Seng
name: Stroud, David A.
name: Christodoulou, John
name: Goranitis, Ilias
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Science Policy

description: Supplementary Material 1
Additional file 1: of The application of heterogeneous cluster grouping to reflective writing for medical humanities literature study to enhance studentsâ   empathy, critical thinking, and reflective writing
Creators: name: Hung-Chang Liao
name: Ya-Huei Wang
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Cancer
subject: Science Policy

description: The teaching content and discussion topics. The content and topics provided for medical humanities literature study. (DOCX 18Â kb)
The development of bioinformatic and chemoinformatic approaches for structure-activity modelling and discovery of antimicrobial peptides
Creators: name: Fjell, Christopher David
Publisher: name: University of British Columbia
Year: 2009

description: The emergence of pathogens resistant to available drug therapies is a pressing global health problem. Antimicrobial peptides (AMPs) may potentially form new therapeutics to counter these pathogens. AMPs are key components in the mammalian innate immune system and are responsible for both direct killing and immunomodulatory effects in host defense against pathogenic organisms. This thesis describes computational methods for the identification of novel natural and synthetic AMPs. A bioinformatic resource was constructed for classification and discovery of gene- coded AMPs, consisting of a database of clustered known AMPs and a set of hidden Markov models (HMMs). One set of 146 clusters was based on the mature peptide sequence, and one set of 40 clusters was based on propeptide sequence. The bovine genome was analyzed using the AMPer resources, and 27 of the 34 known bovine AMPs were identified with high confidence and up to 69 AMPs were predicted to be novel peptides. One novel cathelicidin AMP was experimentally verified as up-regulated in response to infection in bovine intestinal tissue. A chemoinformatic analysis was performed to model the antibacterial activity of short synthetic peptides. Using high-throughput screening data for the activities of over 1400 peptides of diverse sequence, quantitative structure-activity relation (QSAR) models were created using artificial neural networks and physical characteristics of the peptide that included three-dimensional atomic structure. The models were used to predict the activity of a set of approximately 100,000 peptide sequence variants. After ranking the predicted activity, the models were shown to be very accurate. When 200 peptides were synthesized and screened using four levels of expected activity, 94% of the top 50 peptides expected to have the highest level of activity were found to be highly active. Several promising candidates were synthesized with high quality and tested against several multi- antibiotic-resistant pathogens including clinical strains of Pseudomonas aeruginosa, Staphylococcus aureus, Enterococcus faecalis and Escherichia coli. These peptides were found to be highly active against these pathogens as determined by minimal inhibitory concentration; this serves as independent confirmation of the effectiveness of high-throughput screening and in silico analysis for identifying peptide antibiotic drug leads.
Additional file 7 of A benchmark for microRNA quantification algorithms using the OpenArray platform
Creators: name: McCall, Matthew
name: Baras, Alexander
name: Crits-Christoph, Alexander
name: Ingersoll, Roxann
name: McAlexander, Melissa
name: Witwer, Kenneth
name: Halushka, Marc
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology

description: Supplementary Figures. A PDF containing 7 Supplementary Figures referred to in this manuscript. (PDF 770 kb)
Depolymerisation polyolefinischer Kunststoffe
Creators: name: Schröter, Stephan
Publisher: name: Hochschulbibliothek, Hochschule Merseburg
Year: 2019
Subjects: subject: Kunststoffabfälle
subject: Basischemikalienproduktion
subject: Depolymerisation
subject: DDC::500 Naturwissenschaften und Mathematik::540 Chemie::540 Chemie und zugeordnete Wissenschaften

description: Das Forschungsprojekt „Evaluierung unter Realbedingungen von thermisch-chemischen Depolymerisationstechnologien (Zersetzungsverfahren) zur Verwertung von Kunststoffabfällen“ der Deutschen Bundesstiftung Umwelt untersucht das Potential der stofflichen Nutzung von Kunststoffabfällen als Ausgangsstoff zur Basischemikalienproduktion. Sowohl die praktische Durchführbarkeit von diversen Prozessen zur Depolymerisation von Kunststoffen, als auch deren wirtschaftliche Aspekte sollen bewertet werden. Das Projekt wird in Zusammenhang mit mittelständigen Unternehmen aus der kunststoffabfallverwertenden Industrie durchgeführt. Im Zusammenhang mit dem Forschungsprojekt sollte im Rahmen dieser Bachelorarbeit die katalytische Depolymerisation vom Modellkunststoff HD-Polyethylen im Labormaßstab untersucht werden. Die Versuchsreihen wurden in einem Rührkesselreaktor (Verölung) und im Drehrohrreaktor (Pyrolyse) durchgeführt und miteinander verglichen. Aus den Ergebnissen sollten Aussagen über die Produktentwicklung und der Produktzusammensetzung in Abhängigkeit von den Prozessbedingungen abgeleitet werden. Weiterhin sollte die Depolymerisation mit Hilfe von verschiedenen Katalysatoren auf Zeolithbasis durchgeführt werden, wodurch eine Bewertung des Einflusses von der Zahl der aktiven Zentren der Katalysatoren, deren Korngröße und deren Kristallitstruktur ermöglicht werden sollte.
Additional file 1 of Impact of pharmacist-led aminoglycoside stewardship: a 10-year observational study
Creators: name: Shinoda, Yasutaka
name: Ohashi, Kengo
name: Matsuoka, Tomoko
name: Arai, Kaori
name: Hotta, Nao
name: Usami, Eiseki
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Science Policy
subject: Virology

description: Supplementary Material 1: Definition of the criteria for assessing the appropriateness of aminoglycosides. Table S1. Appropriate initial dose and serum concentration of aminoglycosides based on renal function; Table S2. Appropriateness of aminoglycoside use; Table S3. Clinical endpoints.
Modern Physics for Engineers Lecture slides 21c – Voltages and Fermi levels
Creators: name: Miller, David
Publisher: name: Stanford Digital Repository
Year: 2025
Subjects: Fermi levels
Semiconductor diodes

description: This lecture part shows why it is that, when we apply a voltage to a diode, we separate the Fermi levels on the two sides by an amount equal (in electron-volts) to the applied ("bias") voltage. This will allow us to understand biasing of diodes. (slides)
Additional file 2 of Why and how genetic canalization evolves in gene regulatory networks
Creators: name: Rünneburger, Estelle
name: Rouzic, Arnaud Le
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Figure S3. Scale effect on canalization scores. Figure S4. Canalization measured as coefficient of variation. Evolution of canalization when measured relative to the phenotypic expression (i.e. in a similar way as a coefficient of variation: C n i ′ = log Var ( M n i ) / S n i $C^{\prime }_{n_{i}} = \log \sqrt { ext {Var}(M_{n_{i}})}/S_{n_{i}}$ . In practice, we computed C ¯ n ′ ≃ 1 2 C ¯ n − log S ¯ n $\overline C^{\prime }_{n} \simeq \frac{1}{2}\overline {C}_{n} - \log \overline {S}_{n}$ . Subfigure indexes match figure numbers from the main text, the Y axis represents C ¯ ′ $\overline C^{\prime }$ averaged over different categories of genes (selected, non-selected, and for subfigure (4b), selected for optima of 0 (top blue line) and 1 (bottom blue line)). (PDF 6 kb)
Additional file 1: of Cloning, functional expression and characterization of a bifunctional 3-hydroxybutanal dehydrogenase /reductase involved in acetone metabolism by Desulfococcus biacutus
Creators: name: Frey, Jasmin
name: Rusche, Hendrik
name: Schink, Bernhard
name: Schleheck, David
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Evolutionary Biology
subject: Ecology
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology
subject: Computational Biology

description: Figure S1. Determination of kinetic parameters of Debia-MDR with substrate acetone; Table S1. Specific activity of recombinant Debia-MDR at different pH values; Table S2. Specific activity of recombinant Debia-MDR at different reaction temperatures. (DOCX 44Â kb)
MOESM1 of Th17 responses are not altered by natural exposure to seasonal allergens in pollen-sensitive patients
Creators: name: Schramm, Agata
name: Jasiewicz-Honkisz, Barbara
name: Osmenda, Grzegorz
name: Wilk, Grzegorz
name: Siedlinski, Mateusz
name: Sagan, Agnieszka
name: Matusik, Pawel
name: Maciag, Joanna
name: Sliwa, Tomasz
name: Czesnikiewicz-Guzik, Marta
name: Mikolajczyk, Tomasz
Publisher: name: Figshare
Year: 2016
Subjects: subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Additional file 1: Fig. 1. T cell populations in allergic patients and in the control group. Lymphocytes were gated based on forward-scattered and side-scattered light (FSC/SSC). Next, the population of CD3+ cells was selected. Among this group, subpopulations of CD4+ and CD8+ cells were separated (a). Next, changes in the T cell populations in allergic patients during pollen season and comparison with the control group were determined (b). V1—before allergy season, V2—during allergy season immediately following the appearance of symptoms, V3—2 weeks after onset of symptoms, CTRL—control group; data are shown as mean±SEM.
MOESM2 of Co-production of hydrogen and ethanol by pfkA-deficient Escherichia coli with activated pentose-phosphate pathway: reduction of pyruvate accumulation
Creators: name: Balaji Sundara Sekar
name: Eunhee Seol
name: Raj, Subramanian Mohan
name: Sunghoon Park
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Marine Biology
subject: Plant Biology

description: Additional file 2: Appendix. Consistency of experimental data and estimation of carbon flux through PP pathway using ethanol yield.
Additional file 3 of Why and how genetic canalization evolves in gene regulatory networks
Creators: name: RĂźnneburger, Estelle
name: Rouzic, Arnaud Le
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Effect of mutation rate. Figure S4. Canalization still evolves at low mutation rates. Average canalization scores at G=10,000 generations and Îź=0.0001 ; two genes out of six are under direct selection pressure. Subfigure indexes match figure numbers from the main text. (3a) Network complexity c. (3b) Constitutive gene expression a. (3e) Strength of stabilizing selection s. (3f) Fitness optimum Î¸. (3g) Population size N. (5b) Network size L. (PDF 6 kb)
Additional file 1: of Traumatic injuries among adult obese patients in southern Taiwan: a cross-sectional study based on a trauma registry system
Creators: name: Jung-Fang Chuang
name: Cheng-Shyuan Rau
name: Pao-Jen Kuo
name: Chen, Yi-Chun
name: Shiun-Yuan Hsu
name: Hsiao-Yun Hsieh
name: Ching-Hua Hsieh
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Computational Biology

description: Table S1: The incidence of associated injuries in obese and normal-weight adult patients. Table S2: The length of stay in hospital for obese and normal-weight adult patients. (DOCX 20 kb)
Additional file 6 of A benchmark for microRNA quantification algorithms using the OpenArray platform
Creators: name: McCall, Matthew
name: Baras, Alexander
name: Crits-Christoph, Alexander
name: Ingersoll, Roxann
name: McAlexander, Melissa
name: Witwer, Kenneth
name: Halushka, Marc
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Science Policy
subject: 60506 Virology

description: TaqMan OpenArray MicroRNA Panels User Guide. The technical manual of the source code for the TaqMan OpenArray MicroRNA Panels, also available at: https://tools.thermofisher.com/content/sfs/manuals/cms_092509.pdf . (PDF 996 KB)
Modern Physics for Engineers Lecture slides 07c – Young’s slits and quantum mechanics
Creators: name: Miller, David
Publisher: name: Stanford Digital Repository
Year: 2025
Subjects: Quantum mechanical measurement
Young's slits

description: This lecture part discusses a classic conundrum in quantum mechanics that is illustrated by Young's slits. Electrons do diffract as expected by Young's slits to give an interference pattern, but we apparently cannot "know" which slit the electron went through. In quantum mechanics, in one view that question is meaningless; indeed if we do measure that, we lose the interference pattern. (slides)
Additional file 1 of NOTCH2NLC GGC intermediate repeat with serine induces hypermyelination and early Parkinson’s disease-like phenotypes in mice
Creators: name: Tu, Haitao
name: Yeo, Xin Yi
name: Zhang, Zhi-Wei
name: Zhou, Wei
name: Tan, Jayne Yi
name: Chi, Li
name: Chia, Sook-Yoong
name: Li, Zhihong
name: Sim, Aik Yong
name: Singh, Brijesh Kumar
name: Ma, Dongrui
name: Zhou, Zhidong
name: Bonne, Isabelle
name: Ling, Shuo-Chien
name: Ng, Adeline S.L.
name: Jung, Sangyong
name: Tan, Eng-King
name: Zeng, Li
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Physiology

description: Supplementary Material 1
Tropizodium serraferum Lin & Li 2009, comb. nov.
Creators: name: Dankittipakul, Pakawin
name: Jocqué, Rudy
name: Singtripop, Tippawan
Publisher: name: Zenodo
Year: 2012
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Zodariidae
Tropizodium
Tropizodium serraferum

description: Tropizodium serraferum (Lin & Li, 2009) comb. nov.
Zodariellum serraferum Lin & Li, 2009: 10, figs 1–7.
Taxonomic remarks. Males of T. serraferum (Lin & Li, 2009) comb. nov. are very similar to those of T. molokai in which the prolateral margin of the MA is provided with a sharply pointed apex and a triangular subapical fold, but in T. serraferum the RTA is strongly curved and its apex is simply directly backwards; females can be distinguished by the epigyne depression, which is omega-shaped instead of round.
description: Published as part of Dankittipakul, Pakawin, Jocqué, Rudy & Singtripop, Tippawan, 2012, Two new species of the spider genus Tropizodium Jocqué & Churchill, 2005 with notes on the femoral organ clade from Southeast Asia (Araneae, Zodariidae, Zodariinae), pp. 62-68 in Zootaxa 3327 on page 64, DOI: 10.11646/zootaxa.3327.1.6, http://zenodo.org/record/208450
Additional file 1. of Factors impacting the quality of peer relationships of youth with Touretteâ  s syndrome
Creators: name: OâHare, Deirdre
name: Valsamma Eapen
name: Helmes, Edward
name: McBain, Kerry
name: Reece, John
name: Grove, Rachel
Publisher: name: Figshare
Year: 2015
Subjects: subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: Australian Tourette Survey. (DOCX 356 kb)
Additional file 3: of An organisational change intervention for increasing the delivery of smoking cessation support in addiction treatment centres: study protocol for a randomized controlled trial
Creators: name: Bonevski, Billie
name: Guillaumier, Ashleigh
name: Shakeshaft, Anthony
name: Farrell, Michael
name: Tzelepis, Flora
name: Walsberger, Scott
name: DâEste, Catherine
name: Paul, Chris
name: Dunlop, Adrian
name: Searles, Andrew
name: Kelly, Peter
name: Fry, Rae
name: Stirling, Robert
name: Fowlie, Carrie
name: Skelton, Eliza
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: TNT Intervention Manual - BRIEF. TNT Project Working Manual. A brief working document containing 1â  2 page user-friendly summaries of each of the eight components of the TNT intervention with links to resources developed and/or provided as part of the trial. (PDF 2612 kb)