cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
SLOctolyzer: Fully automatic analysis toolkit for segmentation and feature extracting in scanning laser ophthalmoscopy images
Creators: name: Burke, Jamie
name: Gibbon, Samuel
name: Engelmann, Justin
name: Threlfall, Adam
name: Giarratano, Ylenia
name: Hamid, Charlene
name: King, Stuart
name: MacCormick, Ian J. C.
name: MacGillivray, Tom
Publisher: name: arXiv
Year: 2024
Subjects: subject: Image and Video Processing (eess.IV)
subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Machine Learning (cs.LG)
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: FOS: Computer and information sciences

description: Purpose: The purpose of this study was to introduce SLOctolyzer: an open-source analysis toolkit for en face retinal vessels in infrared reflectance scanning laser ophthalmoscopy (SLO) images.
 Methods: SLOctolyzer includes two main modules: segmentation and measurement. The segmentation module uses deep learning methods to delineate retinal anatomy, and detects the fovea and optic disc, whereas the measurement module quantifies the complexity, density, tortuosity, and calibre of the segmented retinal vessels. We evaluated the segmentation module using unseen data and measured its reproducibility.
 Results: SLOctolyzer's segmentation module performed well against unseen internal test data (Dice for all-vessels = 0.91; arteries = 0.84; veins = 0.85; optic disc = 0.94; and fovea = 0.88). External validation against severe retinal pathology showed decreased performance (Dice for arteries = 0.72; veins = 0.75; and optic disc = 0.90). SLOctolyzer had good reproducibility (mean difference for fractal dimension = -0.001; density = -0.0003; calibre = -0.32 microns; and tortuosity density = 0.001). SLOctolyzer can process a 768 x 768 pixel macula-centred SLO image in under 20 seconds and a disc-centred SLO image in under 30 seconds using a laptop CPU.
 Conclusions: To our knowledge, SLOctolyzer is the first open-source tool to convert raw SLO images into reproducible and clinically meaningful retinal vascular parameters. SLO images are captured simultaneous to optical coherence tomography (OCT), and we believe SLOctolyzer will be useful for extracting retinal vascular measurements from large OCT image sets and linking them to ocular or systemic diseases. It requires no specialist knowledge or proprietary software, and allows manual correction of segmentations and re-computing of vascular metrics. SLOctolyzer is freely available at https://github.com/jaburke166/SLOctolyzer.
description: 13 pages, 6 figures, 6 tables + Supplementary (9 pages, 13 figures, 4 tables, 2 code listings). Accepted and published at ARVO Translational Vision Science and Technology
Sphegina (Asiosphegina) trichaeta Hippa, van Steenis & Mutin 2015
Creators: name: Steenis, Jeroen Van
name: Hippa, Heikki
name: Mutin, Valeri A.
Publisher: name: Zenodo
Year: 2018
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Syrphidae
Sphegina
Sphegina trichaeta

description: Sphegina (Asiosphegina) trichaeta Hippa, van Steenis & Mutin, 2015
Figs 86F, 90E
Sphegina (Asiosphegina) trichaeta Hippa, van Steenis & Mutin, 2015: 25. Type locality: Kambaiti, Myanmar (holotype, ♂, NHM).
Remarks
Only known by the type material from Myanmar, Kambaiti (Hippa et al. 2015).
description: Published as part of Steenis, Jeroen Van, Hippa, Heikki & Mutin, Valeri A., 2018, Revision of the Oriental species of the genus Sphegina Meigen, 1822 (Diptera: Syrphidae), pp. 1-198 in European Journal of Taxonomy 489 on page 178, DOI: 10.5852/ejt.2018.489, http://zenodo.org/record/3830537
sj-pdf-3-tia-10.1177_2331216520932467 - Supplemental material for Perception of One’s Own Voice After Hearing-Aid Fitting for Naive Hearing-Aid Users and Hearing-Aid Refitting for Experienced Hearing-Aid Users
Creators: name: Hengen, Johanna
name: Hammarström, Inger L.
name: Stenfelt, Stefan
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: 110315 Otorhinolaryngology
subject: FOS: Clinical medicine

description: Supplemental material, sj-pdf-3-tia-10.1177_2331216520932467 for Perception of One’s Own Voice After Hearing-Aid Fitting for Naive Hearing-Aid Users and Hearing-Aid Refitting for Experienced Hearing-Aid Users by Johanna Hengen, Inger L. Hammarström and Stefan Stenfelt in Trends in Hearing
Supplementary document for The effects of biomass burning on CO, C2H6, C2H2, HCN and H2CO during long-term FTIR measurements in Hefei, China - 6847918.pdf
Creators: name: Zhu, Qianqian
name: Wang, Wei
name: Shan, Changgong
name: Xie, Yu
name: Zeng, Xiangyu
name: WU, peng
name: LIANG, BIN
name: Liu, Cheng
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: The typical spectral fitting results of the target species
38232_Appendix – Supplemental material for Effects of Foot Strike Techniques on Running Biomechanics: A Systematic Review and Meta-analysis
Creators: name: Xu, Yilin
name: Yuan, Peng
name: Wang, Ran
name: Wang, Dan
name: Liu, Jia
name: Zhou, Hui
Publisher: name: SAGE Journals
Year: 2020
Subjects: Health and Community Services
Orthopaedics
Sports Medicine

description: Supplemental material, 38232_Appendix for Effects of Foot Strike Techniques on Running Biomechanics: A Systematic Review and Meta-analysis by Yilin Xu, Peng Yuan, Ran Wang, Dan Wang, Jia Liu and Hui Zhou in Sports Health: A Multidisciplinary Approach
Additional file 1 of Factors for incidence risk and prognosis of synchronous brain metastases in pulmonary large cell carcinoma patients: a population-based study
Creators: name: Zheng, Xuan
name: Mu, Shuai
name: Wang, Lijie
name: Tao, Haitao
name: Huang, Di
name: Huang, Ziwei
name: Li, Xiaoyan
name: Cui, Pengfei
name: Li, Tao
name: Liu, Qingyan
name: Hu, Yi
Publisher: name: figshare
Year: 2024
Subjects: Medicine
Biological Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified
Developmental Biology
Cancer

description: Additional file 1. Table S1. Baseline characteristics of patients with SBM receiving different treatments. Table S2. Baseline characteristics of patients with SBM receiving chemotherapy only and chemotherapy plus radiotherapy before and after PSM. Table S3. Baseline characteristics of patients with SBM receiving radiotherapy only and no treatment before and after PSM. Figure S1. Kaplan–Meier curves of LCC patients with SBM receiving chemotherapy and radiotherapy vs radiotherapy before and after 1:2 PSM. Figure S2. Kaplan–Meier curves of LCC patients with SBM receiving radiotherapy vs no treatment before and after 1:1 PSM.
Supplemental Material, Ambidexterity_Schools_AppendixA - Principals between exploitation and exploration: Results of a nationwide study on ambidexterity of school leaders
Creators: name: Pietsch, Marcus
name: Tulowitzki, Pierre
name: Cramer, Colin
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: Education
subject: 150310 Organisation and Management Theory
subject: FOS: Economics and business

description: Supplemental Material, Ambidexterity_Schools_AppendixA for Principals between exploitation and exploration: Results of a nationwide study on ambidexterity of school leaders by Marcus Pietsch, Pierre Tulowitzki and Colin Cramer in Educational Management Administration & Leadership
Additional file 1 of Complexity vs linearity: relations between functional traits in a heterotrophic protist
Creators: name: Svendsen, Nils A.
name: Radchuk, Viktoriia
name: Morel-Journel, Thibaut
name: Thuillier, Virginie
name: Schtickzelle, Nicolas
Publisher: name: figshare
Year: 2024
Subjects: subject: Ecology
subject: FOS: Biological sciences

description: Additional file 1. Supplementary Figure 1. Pairwise relationships among the six functional traits measured for the 39 T.thermophila strains, without the D14 which was suspected to be an outlier. Each dot represents the average valueof all replicates at the strain level, the blue line a linear regression, and the red curve a GAM. Both are representedwith their respective 95% confident interval. Above every graph is displayed the deviance explained (D.exp) byeach model. When outlined, the non-linear GAM is significantly better than the linear model (e.d.f. > 1), otherwisethe non-linearity does not improve the model’s fit and the GAM is behaving exactly as the linear model, hence thesame D.exp.
Supplementary Table 3
Creators: name: Gunther-Harrington, Catherine T
name: Sharpe, Ashley N
name: Vernau, Karen M
name: Ueda, Yu
name: Montgomery, Elizabeth A
name: Surmick, Jennifer D
name: Fernandez, Nicole
name: Ontiveros, Eric
name: Walker, Ashley L
name: Stern, Joshua A
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 70706 Veterinary Medicine
subject: FOS: Veterinary sciences

description: Results of linear regression analysis including proportionality constant (a), standard error of the Y estimate, allometric exponents (b), standard error of b, and R2 for logarithmically transformed echocardiographic variables.
Magnetic Force Microscopy: High Quality-Factor Two-Pass Mode
Creators: name: Habenschaden, Christopher
name: Sievers, Sibylle
name: Klasen, Alexander
name: Cerreta, Andrea
name: Schumacher, Hans Werner
Publisher: name: arXiv
Year: 2024
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Magnetic force microscopy (MFM) is a well-established technique in scanning probe microscopy that allows for the imaging of magnetic samples with a spatial resolution of tens of nm and stray fields down to the mT range. The spatial resolution and field sensitivity can be significantly improved by measuring in vacuum conditions. This improvement originates from the higher quality-factor (Q-factor) of the cantilever's oscillation in vacuum compared to ambient conditions. However, while high Q-factors are desirable as they directly enhance the magnetic measurement signal, they pose a challenge when performing standard MFM two-pass (lift) mode measurements. At high Q-factors, amplitude-based topography measurements become impossible, and the MFM phase response behaves non-linearly. Here, we present a modified two-pass mode implementation in a vacuum atomic force microscope (AFM) that addresses these issues. By controlling the Q-factor in the first pass and using a phase-locked loop (PLL) technique in the second pass, high Q-factor measurements in vacuum are enabled. Measuring the cantilever's frequency shift instead of the phase shift eliminates the issue of emerging nonlinearities. The improvements in MFM signal-to-noise ratio are demonstrated using a nano-patterned magnetic sample. The elimination of non-linear response is highlighted through measurements performed on a well-characterized multilayer reference sample. Finally, we discuss a technique that avoids topography-induced artifacts by following the average sample slope. The newly developed, sensitive, and distortion-free high quality-factor two-pass mode has the potential to be widely implemented in commercial setups, facilitating high-resolution MFM measurements and advancing studies of modern magnetic materials.
description: The following article has been accepted by Review of Scientific Instruments. After it is published, it will be found at https://pubs.aip.org/aip/rsi. Copyright 2024 Author(s). This article is distributed under a Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International (CC BY-NC-ND) License
Supplemental Material, sj-docx-1-tpx-10.1177_0192623320947075 - Local Tolerance and Biodegradability of a Novel Biodegradable Artificial Dura Mater Graft Following Implantation Onto a Dural Defect in Rabbits
Creators: name: Ramot, Yuval
name: Harnof, Sagi
name: Klein, Ido
name: Amouyal, Netanel
name: Steiner, Michal
name: Manassa, Nora Nseir
name: Bahar, Amir
name: Rousselle, Serge
name: Nyska, Abraham
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: FOS: Clinical medicine

description: Supplemental Material, sj-docx-1-tpx-10.1177_0192623320947075 for Local Tolerance and Biodegradability of a Novel Biodegradable Artificial Dura Mater Graft Following Implantation Onto a Dural Defect in Rabbits by Yuval Ramot, Sagi Harnof, Ido Klein, Netanel Amouyal, Michal Steiner, Nora Nseir Manassa, Amir Bahar, Serge Rousselle and Abraham Nyska in Toxicologic Pathology
Supplementary document for Dual-exposure temporal laser speckle imaging for simultaneously accessing microvascular blood perfusion and angiography - 6848566.pdf
Creators: name: Li, Ruolan
name: Ma, Minghui
name: Wang, Chen
name: hong, jiachi
name: Zhang, Zhihong
name: Lu, Jinling
name: Li, Pengcheng
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: Supplementary Document provide additional formula derivations and images.
Time-kernel for lattice determinations of NLO hadronic vacuum polarization contributions to the muon $g$-$2$
Creators: name: Balzani, Elisa
name: Laporta, Stefano
name: Passera, Massimo
Publisher: name: arXiv
Year: 2024
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We study the time-momentum representation of the kernel needed to compute hadronic vacuum polarization contributions to the muon $g$-$2$ in the space-like region at next-to-leading order. For small values of the time, we present analytical series expansions; for large values of the time, we present numerical series expansions which overcome the problems showed by naïve asymptotic expansions. These results are to be employed in lattice QCD determinations of hadronic vacuum polarization contributions to the muon $g$-$2$ at next-to-leading order.
description: 11 pages, 3 figures v2: published version
DS_10.1177_1071100719840814 – Supplemental material for Forefoot Reconstruction Following Metatarsal Head Resection Arthroplasty With a Plantar Approach—A 20-Year Follow-Up
Creators: name: Simon, Maciej J. K.
name: Strahl, André
name: Mussawy, Haider
name: Rolvien, Tim
name: Schumacher, Robert F.
name: Seller, Marcel
name: Rüther, Wolfgang
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 110314 Orthopaedics
subject: FOS: Clinical medicine
subject: 110604 Sports Medicine
subject: FOS: Health sciences
subject: 110323 Surgery

description: Supplemental material, DS_10.1177_1071100719840814 for Forefoot Reconstruction Following Metatarsal Head Resection Arthroplasty With a Plantar Approach—A 20-Year Follow-Up by Maciej J. K. Simon, André Strahl, Haider Mussawy, Tim Rolvien, Robert F. Schumacher, Marcel Seller and Wolfgang Rüther in Foot & Ankle International
EXPLORING THE SIGNIFICANCE OF WOMEN IN KHALED HOSSEINI'S "THE THOUSAND SPLENDID SUNS"
Creators: name: Nazarova, Gulbahor
name: Davronova, Rano
Publisher: name: Zenodo
Year: 2024

description: Khaled Hosseini is citizen of Afghanistan living in the United States considered to be one of the leading writers establishing himself as a great representative of literature by his noble works. In 2007, he wrote his second work named «A Thousand Splendid Suns», in which he tried to show the image of the reality of life along with the existence of love in injustice society by describing difficult situations and torture moments of women characters. This work reveals not only the horrors of war, but also importance of peace by the sequence of events occurred in the novel.
Additional file 1 of Associations between plant-based dietary patterns and risks of type 2 diabetes, cardiovascular disease, cancer, and mortality – a systematic review and meta-analysis
Creators: name: Wang, Yeli
name: Liu, Binkai
name: Han, Han
name: Hu, Yang
name: Zhu, Lu
name: Rimm, Eric B.
name: Hu, Frank B.
name: Sun, Qi
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Biotechnology
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Plant Biology

description: Additional file 1
The effect of health education intervention through mobile phone on hypertension patients : A systematic review
Creators: name: Israfil, Israfil
name: Kusnanto, Kusnanto
name: Yusuf, Ah.
name: Efendi, Ferry
Publisher: name: figshare
Year: 2022
Subjects: subject: 111799 Public Health and Health Services not elsewhere classified
subject: FOS: Health sciences

description: Introduction: Hypertension is a silent killer disease that, if not handled properly, will lead to dangerous complications for the patient. Health education through mobile phones can be an intervention used to improve health services and the management of hypertension in the community. This study aims to synthesise research findings on the effect of mobile phone health education interventions on hypertensive patients. Materials and methods: A systematic review. Search strategy was conducted on international journal databases, namely Scopus, PubMed, ProQuest, Web of Science, and Science Direct with the keywords 'health education', 'mobile phone' and 'hypertension'. Inclusion criteria using PICOS, namely Population: hypertensive patients, Intervention: health education using a mobile phone, Comparation: ordinary health education, Output: knowledge, attitudes, behaviour, Study design: trial method. The publication year 2017-2021. Results: There were 145 articles found in the search. Articles were identified and screened resulting in five complete articles that met the inclusion criteria. The results of this study found that health education interventions via mobile phones could increase patient knowledge about hypertension; improve self-management; monitor blood pressure; increase adherence to pharmacological treatment, a hypertensive diet, i.e.,low salt intake, vegetable and fruit intake, and physical activity; decrease blood pressure; and improve quality of life. Health education via mobile phones can also provide the latest information quickly to patients about controlling hypertension, antihypertensive drugs, and health services that can be utilised. Conclusion: Health education interventions via mobile phones have a significant positive effect in controlling hypertension in the community, but it is necessary to consider the patient's age, socioeconomic status, literacy conditions, and ability to use mobile phones to receive the health education that will be provided.
Steering cooperation: Adversarial attacks on prisoner's dilemma in complex networks
Creators: name: Takemoto, Kazuhiro
Publisher: name: arXiv
Year: 2024
Subjects: subject: Physics and Society (physics.soc-ph)
subject: Social and Information Networks (cs.SI)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: This study examines the application of adversarial attack concepts to control the evolution of cooperation in the prisoner's dilemma game in complex networks. Specifically, it proposes a simple adversarial attack method that drives players' strategies towards a target state by adding small perturbations to social networks. The proposed method is evaluated on both model and real-world networks. Numerical simulations demonstrate that the proposed method can effectively promote cooperation with significantly smaller perturbations compared to other techniques. Additionally, this study shows that adversarial attacks can also be useful in inhibiting cooperation (promoting defection). The findings reveal that adversarial attacks on social networks can be potent tools for both promoting and inhibiting cooperation, opening new possibilities for controlling cooperative behavior in social systems while also highlighting potential risks.
description: 19 pages, 4 figures
Reconstructing moving morphology using RaspberryPi (PiROMM): Range of motion in ostrich cervical vertebrae at progressive stages of dissection
Creators: name: Falkingham, Peter
Publisher: name: figshare
Year: 2022
Subjects: Anatomy
Biological Techniques

description: Poster, videos, and trial dataset regarding technique of documenting range of motion using synchronized Raspberry Pi cameras and the XROMM toolkit.
 30-05-22 - added all data and animation files from 2017.
Additional file 2 of Complexity vs linearity: relations between functional traits in a heterotrophic protist
Creators: name: Svendsen, Nils A.
name: Radchuk, Viktoriia
name: Morel-Journel, Thibaut
name: Thuillier, Virginie
name: Schtickzelle, Nicolas
Publisher: name: figshare
Year: 2024
Subjects: subject: Ecology
subject: FOS: Biological sciences

description: Additional file 2. Supplementary Figure 2. PCA analysis performed on the six functional traits (averaged at the strain level) for39 T. thermophila strains, without the D14 which was suspected to be an outlier. The left panel represent thedistribution of the strains along dimensions 1 and 2 (A) and along dimensions 1 and 3 (C). The numbers stand forthe labels of the strains. The right panel represent the associated correlation circles along the first and seconddimensions (B) and the first and third dimensions (D). The functional traits are colored based on their measurementdifficulty.
Sphegina (Asiosphegina) trispina Hippa, van Steenis & Mutin 2015
Creators: name: Steenis, Jeroen Van
name: Hippa, Heikki
name: Mutin, Valeri A.
Publisher: name: Zenodo
Year: 2018
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Syrphidae
Sphegina
Sphegina trispina

description: Sphegina (Asiosphegina) trispina Hippa, van Steenis & Mutin, 2015
Sphegina (Asiosphegina) trispina Hippa, van Steenis & Mutin, 2015: 24. Type locality: Kambaiti, Myanmar (holotype, ♂, NHRS).
Remarks
Only known by the type material from Myanmar, Kambaiti (Hippa et al. 2015).
description: Published as part of Steenis, Jeroen Van, Hippa, Heikki & Mutin, Valeri A., 2018, Revision of the Oriental species of the genus Sphegina Meigen, 1822 (Diptera: Syrphidae), pp. 1-198 in European Journal of Taxonomy 489 on pages 180-181, DOI: 10.5852/ejt.2018.489, http://zenodo.org/record/3830537
Inner structure of dark matter halos at high $z$ in cosmological models with non-power-law primordial spectra
Creators: name: Tkachev, M. V.
name: Pilipenko, S. V.
name: Mikheeva, E. V.
name: Lukash, V. N.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: We consider three cosmological models with non-power-law spectra of primordial density perturbations and test them against $Λ$CDM in density profiles of dark matter halos. We found that, despite the significant difference in initial conditions, the mean density profiles of all models are still close to the Navarro-Frenk-White one, albeit with some dispersion. We demonstrate that the density profile slopes in the innermost part of halo have a significant evolution with $z$, which can be used to identify the cosmological model. We also present a toy model resulting in the appearance of core in the central part of dark matter halo.
description: 11 pages, 6 figures, published in Phys. Rev. D (24 October 2024)
Calorie Burn Estimation in Community Parks Through DLICP: A Mathematical Modelling Approach
Creators: name: Sebastian, Abhishek
name: A, Annis Fathima
name: R, Pragna
name: S, Madhan Kumar
name: M, Jesher Joshua
Publisher: name: arXiv
Year: 2024
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Artificial Intelligence (cs.AI)
subject: Machine Learning (cs.LG)
subject: FOS: Computer and information sciences

description: Community parks play a crucial role in promoting physical activity and overall well-being. This study introduces DLICP (Deep Learning Integrated Community Parks), an innovative approach that combines deep learning techniques specifically, face recognition technology with a novel walking activity measurement algorithm to enhance user experience in community parks. The DLICP utilizes a camera with face recognition software to accurately identify and track park users. Simultaneously, a walking activity measurement algorithm calculates parameters such as the average pace and calories burned, tailored to individual attributes. Extensive evaluations confirm the precision of DLICP, with a Mean Absolute Error (MAE) of 5.64 calories and a Mean Percentage Error (MPE) of 1.96%, benchmarked against widely available fitness measurement devices, such as the Apple Watch Series 6. This study contributes significantly to the development of intelligent smart park systems, enabling real-time updates on burned calories and personalized fitness tracking.
description: Accepted and to be presented at Intellisys 2024 , Also Part of the Indian Patent: 202441050325
Supplementary document for Fiber-optics spectrum monitoring of WDM telecommunication signals with MHz update rates - 6849442.pdf
Creators: name: Shoeib, Afsaneh
name: Fernández, Manuel
name: Rowe, Connor
name: Maram, Reza
name: Ricciardi, Pasquale
name: Azana, Jose
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: Fig. S1. System resolution for different dispersion values and channel spacing. Fig. S2. RTOM trace obtained for the SUT with coherent modulation format of 16-QAM and 400 Gb/s bit rate, spanning the full C-band.
APPENDIX_-_UNSAFE_LIST_26_11_19_suppl_material – Supplemental material for King’s College London’s enquiry into Hans J Eysenck’s ‘Unsafe’ publications must be properly completed
Creators: name: Marks, David F
name: Buchanan, Roderick D
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: 110319 Psychiatry (incl. Psychotherapy)
subject: FOS: Clinical medicine
subject: 111799 Public Health and Health Services not elsewhere classified
subject: FOS: Health sciences

description: Supplemental material, APPENDIX_-_UNSAFE_LIST_26_11_19_suppl_material for King’s College London’s enquiry into Hans J Eysenck’s ‘Unsafe’ publications must be properly completed by David F Marks and Roderick D Buchanan in Journal of Health Psychology
Supplement_3 – Supplemental material for Cartilage Restoration of Patellofemoral Lesions: A Systematic Review
Creators: name: Andrade, Renato
name: Nunes, Joni
name: Hinckel, Betina B.
name: Gruskay, Jordan
name: Vasta, Sebastiano
name: Bastos, Ricardo
name: J. Miguel Oliveira
name: Reis, Rui L.
name: Gomoll, Andreas H.
name: Espregueira-Mendes, João
Publisher: name: SAGE Journals
Year: 2019
Subjects: subject: 110314 Orthopaedics
subject: FOS: Clinical medicine
subject: 110604 Sports Medicine
subject: FOS: Health sciences
subject: 110323 Surgery
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Supplemental material, Supplement_3 for Cartilage Restoration of Patellofemoral Lesions: A Systematic Review by Renato Andrade, Joni Nunes, Betina B. Hinckel, Jordan Gruskay, Sebastiano Vasta, Ricardo Bastos, J. Miguel Oliveira, Rui L. Reis, Andreas H. Gomoll and João Espregueira-Mendes in CARTILAGE
SupplementatyFile_TablePop_rev-leg – Supplemental material for How to save time in surveillance without losing quality: comparison of two methods of surgical site infection surveillance in orthopaedic prosthetics in a French university hospital
Creators: name: Kuczewski, Elisabetta
name: Munier-Marion, Elodie
name: Sélilah Amour
name: Bénet, Thomas
name: Rongieras, Frédéric
name: Monneuse, Olivier
name: Vanhems, Philippe
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: 111099 Nursing not elsewhere classified
subject: 111799 Public Health and Health Services not elsewhere classified

description: Supplemental material, SupplementatyFile_TablePop_rev-leg for How to save time in surveillance without losing quality: comparison of two methods of surgical site infection surveillance in orthopaedic prosthetics in a French university hospital by Elisabetta Kuczewski, Elodie Munier-Marion, Sélilah Amour, Thomas Bénet, Frédéric Rongieras, Olivier Monneuse and Philippe Vanhems in Journal of Infection Prevention
Additional file 3 of Complexity vs linearity: relations between functional traits in a heterotrophic protist
Creators: name: Svendsen, Nils A.
name: Radchuk, Viktoriia
name: Morel-Journel, Thibaut
name: Thuillier, Virginie
name: Schtickzelle, Nicolas
Publisher: name: figshare
Year: 2024
Subjects: subject: Ecology
subject: FOS: Biological sciences

description: Additional file 3. Supplementary Table 1. Output of the Generalized Additive Models (G.A.M.) performed on relationshipsbetween the different traits of T.thermophila. The below diagonal part of the figure with white boxes correspondsto GAMs performed on the values of all 40 strains, while the above diagonal part with grey boxes corresponds toGAMs performed on only 39 strains, thus considering the strain D14 as an outlier.
Reconstructing moving morphology using RaspberryPi (PiROMM): Range of motion in ostrich cervical vertebrae at progressive stages of dissection
Creators: name: Falkingham, Peter
Publisher: name: figshare
Year: 2017
Subjects: Anatomy
Biological Techniques

description: Poster, videos, and trial dataset regarding technique of documenting range of motion using synchronized Raspberry Pi cameras and the XROMM toolkit.
Sphegina (Asiosphegina) tristriata Brunetti 1913
Creators: name: Steenis, Jeroen Van
name: Hippa, Heikki
name: Mutin, Valeri A.
Publisher: name: Zenodo
Year: 2018
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Syrphidae
Sphegina
Sphegina tristriata

description: Sphegina (Asiosphegina) tristriata Brunetti, 1913
Sphegina tristriata Brunetti, 1913: 165. Type locality: Rotung, India (holotype, ♀, NZSI).
Differential diagnosis
Based on the description and the photo of the type specimens it looks similar to Sphegina (Asiosphegina) bidens and also slightly similar to S. (A.) orientalis. It is distinguished from these by the characters given in the key.
Material examined
Holotype
INDIA • ♀; “Ind. Mus. / Rotung / 1400 ft. / Kemp abor Exp. / 6–13–III– [19]12”; “ Sphegina / tristriata / Brun. Type ♀ / det. Brun. 1923”; “ Sphegina / tristriata / Brun. Type ♀ ”; “TYPE”; “1983 / HI”; “ Sphegina tristriata Brun. ”, Zoological Survey of India / barcode / ZSI0000004490”; photo of holotype in lateral and dorsal view studied; NZSI.
Description
Male
Unknown.
Female
See Brunetti (1913, 1923).
LENGTH. Body 6 mm, wing 4.5 mm.
HEAD. Face in lateral view concave. Faceblack, light grey pollinose. Hypostomal bridge black. Gena and mouth edge yellowish. Frons and vertex black, grey pollinose. Antenna brownish-yellow.
THORAX. Colour brownish-yellow, weakly greyish pollinose, with denser grey pollinose vitta submedially; pleuron with greyish pollinosity pile. Scutellum brownish-yellow, grey pollinose.
WING. Entirely hyaline, stigma yellowish, brown infuscated at junction of veins R 2+3 and R 4+5, along veins bm-cu, r-m and M 1, at apical end of vein R 2+3 and apical part of wing around vein R 4+5. Crossvein dm-cu meeting vein M almost perpendicularly and vein M 1 meeting vein R
4+5
perpendicularly.
LEGS. Pro- and mesoleg yellow, apex of tarsi brownish. Metafemur black and yellow biannulate.
ABDOMEN. Terga black; pile very short and white; tergum II slightly constricted anteriorly and long; colour of tergum III entirely whitish-yellow.
Remarks
The species is only known on the basis of the holotype from “Rotung, N. E. Frontier of India ” (Brunetti 1913). It was described as female in Brunetti (1913, 1923), however, Brunetti (1923) mentioned after the description that the species was “Described from a unique ♂ ”. The holotype has lost the posterior part of abdomen from tergum III onwards and it is not possible to see if the actual specimen is male or female. Based on the very elongate tergum II and the seemingly narrow frons, the specimen is most likely a male, however, the entirely whitish-yellow coloured tergum III is more a female character.
description: Published as part of Steenis, Jeroen Van, Hippa, Heikki & Mutin, Valeri A., 2018, Revision of the Oriental species of the genus Sphegina Meigen, 1822 (Diptera: Syrphidae), pp. 1-198 in European Journal of Taxonomy 489 on page 181, DOI: 10.5852/ejt.2018.489, http://zenodo.org/record/3830537
Supplement_B_Qi_gong_Curriculum_1 – Supplemental material for Effects of Center-Based Delivery of Tai Chi and Qi Gong Group Classes on Self-Reported Symptoms in Cancer Patients and Caregivers
Creators: name: Lopez, Gabriel
name: Santhosshi Narayanan
name: Christie, Aimee
name: Powers-James, Catherine
name: Wenli Liu
name: M Kay Garcia
name: Gomez, Telma
name: Jimin Wu
name: Chunduru, Aditi
name: Williams, Janet L.
name: Yisheng Li
name: Bruera, Eduardo
name: Cohen, Lorenzo
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: 110306 Endocrinology
subject: FOS: Clinical medicine
subject: 111299 Oncology and Carcinogenesis not elsewhere classified
subject: 111702 Aged Health Care

description: Supplemental material, Supplement_B_Qi_gong_Curriculum_1 for Effects of Center-Based Delivery of Tai Chi and Qi Gong Group Classes on Self-Reported Symptoms in Cancer Patients and Caregivers by Gabriel Lopez, Santhosshi Narayanan, Aimee Christie, Catherine Powers-James, Wenli Liu, M Kay Garcia, Telma Gomez, Jimin Wu, Aditi Chunduru, Janet L. Williams, Yisheng Li, Eduardo Bruera and Lorenzo Cohen in Integrative Cancer Therapies
What Are Parents' or Guardians' Interests and Needs for Home-school Cooperation in the Children's Early Language Learning
Creators: name: Rexford, Kristina
name: Chen, Peirong
name: Mehr, Samira Ahmadi
name: Akhter, Saleha
name: Bui, Duong
name: Buldu, Can
name: Corcho, Jorge Clemente
name: Gao, Yujie
name: Hou, Siqi
name: Kahraman, Ayşe
name: Katsuki, Momoka
name: Matban, Narin
name: Pirsahebdel, Saeedeh
name: Lima, Izaskun Rangel
name: Saarinen, Emma
name: Aragón, Irene Santana
name: Takahashi, Naoki
name: Guisado, César Tojeiro
name: Xu, Lu
name: Yamada, Shino
Publisher: name: Zenodo
Year: 2024
Subjects: subject: Educational sciences
subject: FOS: Educational sciences
subject: Early Language Education

description: This poster was created by students from the course "Research in Early Language Education", Spring 2023, University of Eastern Finland. The home-school cooperation plays an essential role during the student's early stages of learning a new language. Therefore, this study investigated the current perspectives on this topic across three continents. There were 40 parents from nine countries who participated in this research. The data was collected by a total of 20 studentresearchers of the course “Research in Early Language Education” through online interviews. The data was analyzed utilizing qualitative content analysis with Atlas.ti software. The findings demonstrate that in the existing home-school cooperation, the majority of parents expressed dissatisfaction due to little communication and support from the schools. At the same time, the study shows that efficient and regulated cooperation has a potential positive impact on the student's language learning.
title: Mitochondrial dysfunction and dynamics in tumourigenesis
Creators: name: Silk, Ryan P.
Publisher: name: The University of Edinburgh
Year: 2025
Subjects: subject: mitochondrial DNA
subject: mtDNA variants
subject: NUMTs
subject: HGSOC
subject: nuclear genome
subject: ovarian cancer sequencing
subject: oxidative phosphorylation
subject: somatic mtDNA variants

description: Mitochondria are essential in many cancer-related processes, but the link between mitochondrial DNA (mtDNA) dysfunction and cancer remains poorly understood, partly due to a historical focus on the nuclear genome and challenges in mtDNA analysis. Current understanding identifies three main somatic mtDNA alterations in tumours: sequence variations, changes in copy number, and integrations into the nuclear genome (NUMTs). Although these phenomena are increasingly observed across tumour types, small sample sizes and limited clinical data have hindered our understanding of their clinical significance, highlighting the need for more focused research. In this thesis, we developed an accurate mtDNA variant-calling pipeline to detect both somatic and germline mtDNA variants across heteroplasmies. We applied this, along with established pipelines for mtDNA copy number estimation and NUMT detection, to the largest High-Grade Serous Ovarian Cancer (HGSOC) sequencing cohort to date. Our analysis revealed frequent somatic mtDNA variants and increased copy numbers in HGSOC tumours compared to normal tissue, though no somatic NUMT integrations were detected. Notably, predicted deleterious mtDNA variants were associated with poorer patient prognosis, independent of age, stage and homologous recombination deficiency. This pattern also scaled with heteroplasmy level and was consistent across missense variant effect prediction strategies. Expanding our analysis to 17,509 tumour samples across various cancer types, we found widespread mtDNA somatic variants, with certain cancers showing higher susceptibility, and significant increases in mtDNA copy number compared to matched normals. Similar survival differences for predicted deleterious mtDNA variants were observed only in a breast tumour cohort. Though survival differences could not be replicated in an independent HGSOC cohort, potentially a result of differing tumour aggressiveness between cohorts. Finally, we explored the functional impact of predicted deleterious mtDNA variants using matched transcriptomic data from the HGSOC cohort. Our findings suggest that these variants may disrupt oxidative phosphorylation (OXPHOS) and could influence chemotherapy sensitivity. Additionally, we identified mtDNA expression groups weakly associated with patient prognosis, independent of predicted deleterious mtDNA variants. Overall, this thesis provides strong evidence for the prognostic value of somatic mtDNA variants in HGSOC, underscoring the importance of mitochondrial genetics in cancer research. These findings lay the groundwork for future studies on the mechanisms of predicted deleterious mtDNA variants, with potential implications for improving patient survival and treatment strategies in HGSOC and other cancers.
Delocalization of skin steady states
Creators: name: Feng, Xu
name: Chen, Shu
Publisher: name: arXiv
Year: 2024
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The skin effect, characterized by the tendency of particles to accumulate at the boundaries, has been extensively studied in non-Hermitian systems. In this work, we propose an intuitive Lindbladian composed of two chains with reversed skin localization. The skin steady state is gradually delocalized as the interchain coupling increases. In the single-body scenario, it corresponds to a shift in the scaling of the Liouvillian gap $Δ$ from $Δ\propto N^0$ to $Δ\propto N^{-2}$. Notably, exact diagonalization results reveal a system-size sensitivity of the single-particle Liouvillian spectrum, inherited from the non-Hermitian effective Hamiltonian's system-size sensitivity. We predict that even an arbitrarily small coupling will induce dramatic changes in the Liouvillian spectrum and steady state in the thermodynamic limit, a phenomenon we term the critical Liouvillian skin effect. Additionally, in the many-body scenario, by employing the stochastic Schrödinger equation to unravel the Lindblad master equation, it is revealed that the scaling behavior of steady-state entanglement changes from the area law to the logarithmic law. This work demonstrates the delocalization of both single-body and many-body skin steady states, introducing a novel mechanism for inducing entanglement transitions beyond the quantum Zeno effect.
description: 10 pages,7 figures
Phenomenological model of gravitational self-force enhanced tides in inspiralling binary neutron stars
Creators: name: Williams, Natalie
name: Schmidt, Patricia
name: Pratten, Geraint
Publisher: name: arXiv
Year: 2024
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: Gravitational waves from inspiralling binary neutron stars provide unique access to ultra-dense nuclear matter and offer the ability to constrain the currently unknown neutron star equation-of-state through tidal measurements. This, however, requires the availability of accurate and efficient tidal waveform models. In this paper we present PhenomGSF, a new phenomenological tidal phase model for the inspiral of neutron stars in the frequency-domain, which captures the gravitational self-force informed tidal contributions of the time-domain effective-one-body model TEOBResumS. PhenomGSF is highly faithful and computationally efficient, and by choosing a modular approach, it can be used in conjunction with any frequency-domain binary black hole waveform model to generate the complete phase for a binary neutron star inspiral. PhenomGSF is valid for neutron star binaries with unequal masses and mass ratios between 1 and 3, and dimensionless tidal deformabilities up to 5000. Furthermore, PhenomGSF does not assume universal relations or parameterised equations-of-state, hence allowing for exotic matter analyses and beyond standard model physics investigations. We demonstrate the efficacy and accuracy of our model through comparisons against TEOBResumS, numerical relativity waveforms and full Bayesian inference, including a reanalysis of the binary neutron star observation GW170817.
description: 26 pages, 14 figures
NEW RECORDS OF ANAMORPHIC FUNGI IN UKRAINE FROM THE LEFT BANK OF DNIEPER RIVER POLISSYA. 2. COELOMYCETES OF APIOCARPELLA, MARSSONINA AND MONOCHAETIA GENERA
Creators: name: Andrianova, Tetiana
Publisher: name: figshare
Year: 2024
Subjects: classificationCode: 310705
subject: Mycology

description: Apiocarpella anisomera (Kabat et Bubak) Melnik, Marssonina sennenis (Gonz. Frag.) Karak., M. stellariae (I.E. Brezhnev) Karak. and Monochaetia saccardoana (Voglino) Sacc. et Traverso are reported as four new species for the territory of Ukraine. Fungi were collected on plants in the Desniansko-Starogutsky national nature park (Sumy Region). Species descriptions, general distribution and illustrations are provided. Details of these fungi taxonomy, morphology and biology are discussed.
Supplementary document for Opto-thermal manipulation with 3 μm mid-infrared Er:ZBLAN fiber laser - 6849651.pdf
Creators: name: Mamuti, Roukuya
name: Shimizu, Masaya
name: Fuji, Takao
name: Kudo, Tetsuhiro
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Optical Physics not elsewhere classified

description: Water absorption spectra, heavy water, comparison between 1956 and 2700 nm lasers, particle heating and aggregates, temperature estimation, summarized Table, and visualization captions.
Supplement_File – Supplemental material for University Lecturers and Students Could Help in Community Education About SARS-CoV-2 Infection in Uganda
Creators: name: Echoru, Isaac
name: Keneth Iceland Kasozi
name: Ibe Michael Usman
name: Mutuku, Irene Mukenya
name: Robinson Ssebuufu
name: Ajambo, Patricia Decanar
name: Ssempijja, Fred
name: Mujinya, Regan
name: Matama, Kevin
name: Musoke, Grace Henry
name: Ayikobua, Emmanuel Tiyo
name: Ninsiima, Herbert Izo
name: Dare, Samuel Sunday
name: Ejike Daniel Eze
name: Bukenya, Edmund Eriya
name: Nambatya, Grace Keyune
name: MacLeod, Ewan
name: Welburn, Susan Christina
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111799 Public Health and Health Services not elsewhere classified
subject: FOS: Health sciences

description: Supplemental material, Supplement_File for University Lecturers and Students Could Help in Community Education About SARS-CoV-2 Infection in Uganda by Isaac Echoru, Keneth Iceland Kasozi, Ibe Michael Usman, Irene Mukenya Mutuku, Robinson Ssebuufu, Patricia Decanar Ajambo, Fred Ssempijja, Regan Mujinya, Kevin Matama, Grace Henry Musoke, Emmanuel Tiyo Ayikobua, Herbert Izo Ninsiima, Samuel Sunday Dare, Ejike Daniel Eze, Edmund Eriya Bukenya, Grace Keyune Nambatya, Ewan MacLeod and Susan Christina Welburn in Health Services Insights
MIANOWSKA_Suppl.TablesandFiguresandText_Revision1 – Supplemental material for Evaluation of Three Lancing Devices: What Do Blood Volume and Lancing Pain Depend On?
Creators: name: Mianowska, Beata
name: Mlynarski, Wojciech
name: Szadkowska, Irena
name: Szadkowska, Agnieszka
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: 110306 Endocrinology
subject: FOS: Clinical medicine
subject: Medicine
subject: 111199 Nutrition and Dietetics not elsewhere classified

description: Supplemental material, MIANOWSKA_Suppl.TablesandFiguresandText_Revision1 for Evaluation of Three Lancing Devices: What Do Blood Volume and Lancing Pain Depend On? by Beata Mianowska, Wojciech Mlynarski, Irena Szadkowska and Agnieszka Szadkowska in Journal of Diabetes Science and Technology
NEW RECORDS OF ANAMORPHIC FUNGI IN UKRAINE FROM THE LEFT BANK OF THE DNIEPER RIVER POLISSYA. 1. HYPHOMYCETES OF CLADOSPORIUM, FUSICIADIUM, PASSALORA AND RAMULARIA GENERA
Creators: name: Andrianova, Tetiana
Publisher: name: figshare
Year: 2024
Subjects: classificationCode: 310705
subject: Mycology

description: Cladosporium aristolochiae H. Zhang et Z.Y. Zhang, C. galii Mulenko, K. Schub. et M. Kozlowska, Fusicladium astericola (Davis) K. Schub. et U. Braun, F. lysimachiae (Guba) K. Schub.et U. Braun, Passalora comari (Peck) U. Braun and Ramularia rhaetica (Sacc. et G. Winter) Jaap are reported as six new species for Ukraine. They were collected on plants in the Desniansko-Starogutsky National Nature Park (Sumy Region). Species descriptions with micromorphological characters observed under the SEM, general distribution and illustrations are provided. Details of their taxonomy, morphology and biology are discussed.
FEBio FINESSE: An open-source finite element simulation approach to estimate in vivo heart valve strains using shape enforcement
Creators: name: Laurence, Devin W.
name: Sabin, Patricia M.
name: Sulentic, Analise M.
name: Daemer, Matthew
name: Maas, Steve A.
name: Weiss, Jeffrey A.
name: Jolley, Matthew A.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Medical Physics (physics.med-ph)
subject: Biological Physics (physics.bio-ph)
subject: FOS: Physical sciences

description: Finite element simulations are an enticing tool to evaluate heart valve function in healthy and diseased patients; however, patient-specific simulations derived from 3D echocardiography are hampered by several technical challenges. In this work, we present an open-source method to enforce matching between finite element simulations and in vivo image-derived heart valve geometry in the absence of patient-specific material properties, leaflet thickness, and chordae tendineae structures. We evaluate FEBio Finite Element Simulations with Shape Enforcement (FINESSE) using three synthetic test cases covering a wide range of model complexity. Our results suggest that FINESSE can be used to not only enforce finite element simulations to match an image-derived surface, but to also estimate the first principal leaflet strains within +/- 0.03 strain. Key FINESSE considerations include: (i) appropriately defining the user-defined penalty, (ii) omitting the leaflet commissures to improve simulation convergence, and (iii) emulating the chordae tendineae behavior via prescribed leaflet free edge motion or a chordae emulating force. We then use FINESSE to estimate the in vivo valve behavior and leaflet strains for three pediatric patients. In all three cases, FINESSE successfully matched the target surface with median errors similar to or less than the smallest voxel dimension. Further analysis revealed valve-specific findings, such as the tricuspid valve leaflet strains of a 2-day old patient with HLHS being larger than those of two 13-year old patients. The development of this open source pipeline will enable future studies to begin linking in vivo leaflet mechanics with patient outcomes
description: 31 pages, 8 figures