cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Hystrichopsylla tahavuana
Creators: name: Reeves, Will K.
name: Durden, Lance A.
name: Ritzi, Christopher M.
name: Beckham, Katy R.
name: Super, Paul E
name: Oconnor, Barry M.
Publisher: name: Zenodo
Year: 2007
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Siphonaptera
Hystrichopsyllidae
Hystrichopsylla
Hystrichopsylla tahavuana

description: Hystrichopsylla tahavuana Jordan
Ex shrew nest: 1M, NC, Swain Co., Indian Gap, 25 Jul. 1948, D. W. Pfitzer (Pfitzer 1950, Lewis 1974, Benton 1980, Durden & Kollars 1997).
This relatively large flea parasitizes small mammals (Durden & Kollars 1997). It is most common on insectivores, especially moles, in the northeastern United States and eastern Canada. The GSMNP record and the additional Tennessee records are from high elevations along the Appalachians; the next closest records are from Pennsylvania (Lewis 1974, Benton 1980, Durden & Kollars 1997).
description: Published as part of Reeves, Will K., Durden, Lance A., Ritzi, Christopher M., Beckham, Katy R., Super, Paul E & Oconnor, Barry M., 2007, Ectoparasites and other ectosymbiotic arthropods of vertebrates in the Great Smoky Mountains National Park, USA, pp. 31-68 in Zootaxa 1392 on page 42, DOI: 10.5281/zenodo.273680
Gastrotrypes Brues 1922
Creators: name: Sunita, Patra
name: Rajmohana, Keloth
name: Manoj, Kandoth
name: Anjana, Madathil
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Platygastridae
Gastrotrypes

description: KEY TO WORLD SPECIES OF GASTROTRYPES BASED ON FEMALES (modified from ANJANA et al. 2016)
1 T5 distinctly elongate, more than 5× as long as wide 2
– T5 as long as or longer than wide, but less than 5× 3
2 A3 twice as long as wide; forewing with distinct marginal fringe at apical margin G. caudatus Brues
– A3 as long as wide; forewing without distinct marginal fringe at apical margin G. longicaudatus Veenakumari et Buhl
3 Metasoma with 6 visible tergites G. malaysianus Buhl
– Metasoma with 5 visible tergites 4
4 T2 without any basal striations; T3 with scattered punctae G. spatulatus Brues
– T2 at extreme base with a few short basal striations; T3 only with a row of transverse setose, punctae towards base 5
5 A7–A9 elongate, at least 2× as long as wide 6
– A7–A9 not elongate, not more than 1.5× as long as wide 7
6 Frons smooth; OOL> OD G. keralaensis Anjana et Rajmohana
– Frons reticulate coriaceous; OOL <OD G. vindhyensis Mukerjee
7 T1 with a distinct median carina and adpressed lateral grooves G. carinatus Sunita et Rajmohana sp. n.
– T1 sculpture not as above, median carina lacking 8
8 Frons, gena and vertex smooth; hyperoccipital carina distinct G. manii Veenakumari et Buhl
– Frons finely reticulate; hyperoccipital carina absent G. brevis Sunita et Rajmohana sp. n.
description: Published as part of Sunita, Patra, Rajmohana, Keloth, Manoj, Kandoth & Anjana, Madathil, 2022, Two New Species Of The Rare Genus Gastrotrypes Brues (Hymenoptera: Platygastridae) From India, pp. 239-246 in Acta Zoologica Academiae Scientiarum Hungaricae 68 (3) on pages 244-245, DOI: 10.17109/AZH.68.3.239.2022, http://zenodo.org/record/7160937
CLAIRE
Creators: name: Reggio, André Pascal Francis
Publisher: name: ETH Zurich
Year: 2017
Subjects: subject: Concept-Map
subject: VR
subject: Nonlinear learning and teaching
subject: Personal Learning Environment
subject: Complexity
subject: Big data
subject: Machine learning
subject: info:eu-repo/classification/ddc/100
subject: info:eu-repo/classification/ddc/004
subject: info:eu-repo/classification/ddc/370
subject: Philosophy
subject: FOS: Philosophy, ethics and religion
subject: Data processing, computer science
subject: Education

description: CLAIRE is nothing yet. Notwithstanding it is so important that it received a name. The project is complex, the innovative concept carries different aspects so that it has been decided to use ’CLAIRE’ when one means to speak about the whole idea. In general CLAIRE is a knowledge management tool, naively CLAIRE is a program, a platform, a scientific map, etc.  Until there, the reader may be careful to the abusive use of ”is”: it does not mean that CLAIRE is defined by whatever
 follows the verb, but instead it gives a vague idea of one of its aspect. The aim of this paper is to describe the concept of CLAIRE. It is articulated around three action: use, implement, and build.
MOESM1 of A rapid passage through a two-active-X-chromosome state accompanies the switch of imprinted X-inactivation patterns in mouse trophoblast stem cells
Creators: name: Prudhomme, Julie
name: Dubois, Agnès
name: Navarro, Pablo
name: Arnaud, Danielle
name: Avner, Philip
name: Morey, Céline
Publisher: name: Figshare
Year: 2015
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Ecology
subject: Developmental Biology
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Hematology
subject: Plant Biology

description: Additional file 1: HAT resistant clones of F3 cells are bona fide TS cells indiscernible from the parental cell line. A. Representative pictures of F3 TS cells before HAT treatment and of 4 independent HAT resistant clones showing different profiles of Xist expression. Each individual clone is identified by a number and a capital letter which refers to the selection experiment from which the clone has been isolated (see Fig. 1 for experiment description). B. Cumulative histograms showing the level of expression of TS specific markers Cdx2 and Eomes and of markers of TS differentiated states, Esx1 and Prl3b1 [19], assessed by RT-qPCR on a representative sampling of HAT resistant clones obtained during different HAT selections (analysis performed at passage 8 or later after clone picking). Levels have been standardised by Rplp0. Levels measured in F3 TS cells and in F3 TS cells differentiated for 5 days are shown for comparison. For F3 parental female cells, mean and standard deviation have been calculated on the basis of three independent cell cultures and differentiation experiments. A.U. Arbitrary Units. Log scale is used.
MOESM9 of Malaria hotspots defined by clinical malaria, asymptomatic carriage, PCR and vector numbers in a low transmission area on the Kenyan Coast
Creators: name: Kangoye, David
name: Abdisalan Noor
name: Midega, Janet
name: Mwongeli, Joyce
name: Mkabili, Dora
name: Polycarp Mogeni
name: Kerubo, Christine
name: Akoo, Pauline
name: Mwangangi, Joseph
name: Drakeley, Chris
name: Marsh, Kevin
name: Bejon, Philip
name: Njuguna, Patricia
Publisher: name: Figshare
Year: 2016
Subjects: subject: Molecular Biology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Computational Biology

description: Additional file 9. Overlapping of malaria transmission hotspots in 2013. Empty cells indicate no intersection and no overlapping was observed i.e. d > R + r. A ratio = 1 indicates a total overlapping i.e. d = 0 and R = r, or d
Arcyodes incarnata O. F. Cook 1902
Creators: name: Treviño-Zevallos, Italo
name: García-Cunchillos, Iván
name: Lado, Carlos
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Protozoa
Mycetozoa
Myxomycetes
Trichiales
Arcyriaceae
Arcyodes
Arcyodes incarnata

description: Arcyodes incarnata (Alb. & Schwein.) O.F. Cook, Science 15: 651 (1902), Fig. 1
Sporocarps grouped to crowded, sessile. Sporotheca subglobose, 0.5–0.8 mm diam., yellowish (86. l. Y–87. m. Y) to light olive brown (94. l. Ol Br). Hypothallus inconspicuous. Stalk absent. Peridium single, membranous, persistent, yellow (86. l. Y–83. brill. Y), sometimes bright and translucent, pale yellow (89. p. Y) by transmitted light, the inner surface with warts and irregular ridges, sometimes with papillae joined in a fragmented net; dehiscence irregular. Columella absent. Capillitium tubular, pale yellow (89. p. Y) by transmitted light, tubules (3–)4–4.5(–5) µm diam., branched and anastomosed, often with irregular swellings, the surface with warts or spinules, sometimes connected by ridges into a reticulum. Spores free, yellow (83. brill. Y) in mass, pale yellow (89. p. Y) to colourless by transmitted light, subglobose, 7–9 µm diam., warted, with groups of more prominent warts.
Specimen examined: — PERU. Junin: Huancayo, route 14B, 10.8 km W of Hacienda Acopalca, 3505 m, 12º00’18”S, 75º09’38”W, 27 April 2017, bark and wood of Eucalyptus globulus, Lado 25434 (MA-Fungi 96589), trunk of Eucalyptus globulus, Lado 25437 (MA-Fungi 96591).
Comments: —First record for the Southern Hemisphere. Associated with vegetation in cultivated areas, mainly the bark and dead wood of Eucalyptus globulus. The species is recognized by its crowded, sessile sporocarps and spiny or warty capillitium. The specimen analyzed agrees with the description of Nannenga-Bremekamp (1991), however, as observed by Zhang & Li (2013), the spores of the collections examined are larger, up to 9 µm vs. 6–8 µm in diameter in Nannenga-Bremekamp (1991).
description: Published as part of Treviño-Zevallos, Italo, García-Cunchillos, Iván & Lado, Carlos, 2021, New records of Myxomycetes (Amoebozoa) from the tropical Andes, pp. 231-239 in Phytotaxa 522 (3) on page 232, DOI: 10.11646/phytotaxa.522.3.6, http://zenodo.org/record/5560437
Myodopsylla insignis Rothschild
Creators: name: Reeves, Will K.
name: Durden, Lance A.
name: Ritzi, Christopher M.
name: Beckham, Katy R.
name: Super, Paul E
name: Oconnor, Barry M.
Publisher: name: Zenodo
Year: 2007
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Siphonaptera
Ischnopsyllidae
Myodopsylla
Myodopsylla insignis

description: Myodopsylla insignis (Rothschild)
Ex Myotis lucifugus (little brown myotis): 2F, TN, Blount Co., Dry Valley (in cave), 21 Nov. 1949, D. W. Pfitzer (Pfitzer 1950, Benton 1980, Durden & Kollars 1997); 23M, 75F, TN, Blount Co., Abram’s Creek, 19 Jun. 2002, TN Tech. Univ. group, L­2922; 3M, 7F, TN, Blount Co., Abram’s Creek, 19 Jun. 2002, TN Tech. Univ. group, L­2923; 2M, 9F, TN, Blount Co., Abram’s Creek, 19 Jun. 2002, TN Tech. Univ. group, L­2924. Myodopsylla insignis parasitizes the little brown myotis in the eastern USA and other bat species in the
western USA (Durden & Kollars 1997).
description: Published as part of Reeves, Will K., Durden, Lance A., Ritzi, Christopher M., Beckham, Katy R., Super, Paul E & Oconnor, Barry M., 2007, Ectoparasites and other ectosymbiotic arthropods of vertebrates in the Great Smoky Mountains National Park, USA, pp. 31-68 in Zootaxa 1392 on page 42, DOI: 10.5281/zenodo.273680
MOESM2 of A rapid passage through a two-active-X-chromosome state accompanies the switch of imprinted X-inactivation patterns in mouse trophoblast stem cells
Creators: name: Prudhomme, Julie
name: Dubois, Agnès
name: Navarro, Pablo
name: Arnaud, Danielle
name: Avner, Philip
name: Morey, Céline
Publisher: name: Figshare
Year: 2015
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Hematology

description: Additional file 2: X-linked gene expression profiles in various types of HAT resistant clones. A. RNA-FISH for Xist (red) in some of the clones depicted in Fig. 1C. Representative images and cumulative histrograms of the percentage of nuclei with the depicted expression pattern are shown (analysis performed at passage 8 or later after clone picking). No significant difference is observed between any of the clones and F3 parental cells (χ2 test). n > 100. Scale bar = 5 μm. B. Allelic RT-qPCR analysis of X-linked gene expression in HAT resistant clones showing an F3-like expression profile (analysis performed at passage 8 or later after clone picking). Cumulative histograms showing the paternal (blue) and maternal (red) expression levels of the indicated X-linked are shown. Standardisation by Rplp0 has been applied. For F3 parental female cells, mean and standard deviation have been calculated on the basis of three independent cell cultures. The chromosome diagram on the left shows the localisation of the genes analysed in RT-qPCR and by RNA-FISH in panel B, C and D. C. Cumulative histograms of the percentages of nuclei with the depicted RNA-FISH expression pattern in F3 TS cells and in nuclei of 3 independent HAT resistant clones showing a parental-like Xist expression profile (analysis performed at passage 8 or later after clone picking). Seven different X-linked genes distributed along the X-chromosome have been analysed (see Additional file 10 for probe coordinates). Representative images of double RNA-FISH for Xist and for the indicated X-linked gene in clones 12#F and 23#F are shown on the right hand side of the histogram. The inactive X chromosome is identified through Xist RNA accumulation (red). Primary transcription at the indicated X-linked gene is co-detected in green.  0.05). n > 150. Scale bar = 5 μm. D. Allelic RT-qPCR analysis of Cox7b and Atp7a in 8 clones showing an allelic inversion of Xist expression profiles (analysis performed at passage 8 or later after clone picking). Cumulative histograms showing the paternal (blue) and maternal (red) expression levels of the indicated X-linked are shown. Standardisation by Rplp0 has been applied. For F3 parental female cells, mean and standard deviation have been calculated on the basis of three independent cell cultures.
Additional file 2: of Codon optimization of antigen coding sequences improves the immune potential of DNA vaccines against avian influenza virus H5N1 in mice and chickens
Creators: name: Stachyra, Anna
name: Redkiewicz, Patrycja
name: Kosson, Piotr
name: Protasiuk, Anna
name: Gรณra-Sochacka, Anna
name: Kudla, Grzegorz
name: Sirko, Agnieszka
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Alignment of sequences encoding H5 HA included in HAw/pCI, K3/pCI and GK/pCI. (DOCX 58 kb)
Peromyscopsylla scotti Fox
Creators: name: Reeves, Will K.
name: Durden, Lance A.
name: Ritzi, Christopher M.
name: Beckham, Katy R.
name: Super, Paul E
name: Oconnor, Barry M.
Publisher: name: Zenodo
Year: 2007
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Siphonaptera
Leptopsyllidae
Peromyscopsylla
Peromyscopsylla scotti

description: Peromyscopsylla scotti Fox
Ex Peromyscus maniculatus (deer mouse): 1F, TN, Cocke Co., Snake Den Ridge, 2 Jul. 2001, E. B. Pivorun, L­2952.
Peromyscopsylla scotti, a Peromyscus­ associated flea is widely distributed in much of eastern North America including Tennessee (Durden & Kollars 1997), but the above record is the first one for the Park.
description: Published as part of Reeves, Will K., Durden, Lance A., Ritzi, Christopher M., Beckham, Katy R., Super, Paul E & Oconnor, Barry M., 2007, Ectoparasites and other ectosymbiotic arthropods of vertebrates in the Great Smoky Mountains National Park, USA, pp. 31-68 in Zootaxa 1392 on page 43, DOI: 10.5281/zenodo.273680
Trichia mirabilis Nann.
Creators: name: Treviño-Zevallos, Italo
name: García-Cunchillos, Iván
name: Lado, Carlos
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Protozoa
Mycetozoa
Myxomycetes
Trichiales
Trichiaceae
Trichia
Trichia mirabilis

description: Trichia mirabilis Nann. -Bremek., Proc. Kon. Ned. Akad. Wetensch., C. 69(3): 347 (1966), Fig. 3
Sporocarps grouped or scattered, sessile. Sporotheca subglobose, 0.5–0.6 mm diam., brownish black (65. br. Black). Hypothallus inconspicuous. Stalk absent. Peridium double, partially evanescent; outer layer dull, with dirt accumulated in surface, light yellowish brown (94. l. Ol Br); inner layer thin, translucent, pale yellow (89. p. Y) by transmitted light, inner surface warted; dehiscence irregular. Columella absent. Capillitium tubular, elastic, elateriform, yellow (83. brill. Y–84. s. Y) by transmitted light, without attachments to the peridium, tubules 2.6–3(–4) µm diam., flexuous, decorated with 3–4 smooth spirals, free ends short-pointed, 8–9 µm long, sometimes preceded by a 5–6 µm diam. swelling. Spores free, yellow (83. brill. Y–84. s. Y) in mass, yellowish (104. p. g Y–101. l. g Y) by transmitted light, subglobose, 14–15 µm diam., densely warted, wall thick, and with a large pale area.
Specimen examined: — PERU. Ancash: Asunción, Chacas, National Park Huascarán, Punta Olímpica, 4874 m, 9º08’04.3”S, 77º30’38.4”W, 21 April 2013, live and dead plant of Xenophyllum dactylophyllum, Lado 22957 (MA- Fungi 95139), Lado 22958 (MA-Fungi 95140).
Comments: —First record for the Neotropics and Peru. It was found in branches of small shrubs associated with cryoturbed soils, and it represents one of the records at higher altitudes of Myxomycetes in the world. Morphologically, it resembles Trichia contorta (Ditmar) Rostaf. (1875: 259), but it is distinguished by the smaller spores, 11–14 µm diam. vs. 14–15 µm diam. in T. mirabilis, and the length of the pointed free ends, 10–20 µm long vs. 8–9 µm long in T. mirabilis.
description: Published as part of Treviño-Zevallos, Italo, García-Cunchillos, Iván & Lado, Carlos, 2021, New records of Myxomycetes (Amoebozoa) from the tropical Andes, pp. 231-239 in Phytotaxa 522 (3) on page 234, DOI: 10.11646/phytotaxa.522.3.6, http://zenodo.org/record/5560437
MOESM6 of A rapid passage through a two-active-X-chromosome state accompanies the switch of imprinted X-inactivation patterns in mouse trophoblast stem cells
Creators: name: Prudhomme, Julie
name: AgnĂ¨S Dubois
name: Navarro, Pablo
name: Arnaud, Danielle
name: Avner, Philip
name: CĂŠline Morey
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Hematology
subject: Plant Biology

description: Additional file 6: The two-active-X state of early HAT resistant clones is not associated with cell reprogramming towards pluripotency. A. Cumulative histograms showing the expression levels of pluripotency markers Nanog and Oct3/4 measured by RT-qPCR in F3 parental female TS cells and in 3 clones harbouring two active X-chromosomes. Expression levels in XX ES cells (LF2 cell line) are shown for comparison. Standardisation by Rplp0 has been applied. A.U.: Arbitrary Units. B. Same as in panel A on individual cells of each population. Small horizontal bars represent median values. See Additional file 7 for raw quantifications. C. Cumulative histograms showing the level of expression of TS specific markers Cdx2 and Eomes and of markers of TS differentiated states, Esx1 and Prl3b1 [19], assessed by RT-qPCR on a the same clones as in panel A. Expression levels have been standardised by Rplp0. Expression levels measured in F3 TS cells and in F3 TS cells differentiated for 5Â days are shown for comparison. A.U. Arbitrary Units. Log scale is used. D. Same as in panel C for Cdx2 and Eomes on individual cells of each population. Small horizontal bars represent median values. See Additional file 7 for raw quantifications.
MOESM4 of Malaria hotspots defined by clinical malaria, asymptomatic carriage, PCR and vector numbers in a low transmission area on the Kenyan Coast
Creators: name: Kangoye, David
name: Abdisalan Noor
name: Midega, Janet
name: Mwongeli, Joyce
name: Mkabili, Dora
name: Polycarp Mogeni
name: Kerubo, Christine
name: Akoo, Pauline
name: Mwangangi, Joseph
name: Drakeley, Chris
name: Marsh, Kevin
name: Bejon, Philip
name: Njuguna, Patricia
Publisher: name: Figshare
Year: 2016
Subjects: subject: Molecular Biology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Computational Biology

description: Additional file 4. Overlapping of malaria transmission hotspots detected in 2012 with those detected in 2013. Empty cells indicates no intersection and no overlapping was observed i.e. d > R + r. A ratio = 1 indicates a total overlapping i.e. d = 0 and R = r, or d
Additional file 2: of Extending digital PCR analysis by modelling quantification cycle data
Creators: name: Wilson, Philip
name: Ellison, Stephen
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Cell Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology

description: Derivation of Eq. (5). (PDF 405 kb)
Additional file 3: of Pharmacological interventions for delirium in intensive care patients: a protocol for an overview of reviews
Creators: name: Barbateskovic, Marija
name: Larsen, Laura
name: OxenbĂ¸Ll-Collet, Marie
name: Jakobsen, Janus
name: Perner, Anders
name: JĂ¸Rn Wetterslev
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Science Policy

description: Data extraction form. (DOCX 25 kb)
Additional file 2: of Novel polymorphisms in caspase-8 are associated with breast cancer risk in the California Teachers Study
Creators: name: Park, Hannah
name: Ziogas, Argyrios
name: Chang, Jenny
name: Bhumi Desai
name: Bessonova, Leona
name: Garner, Chad
name: Eunjung Lee
name: Neuhausen, Susan
name: Wang, Sophia
name: Huiyan Ma
name: Clague, Jessica
name: Reynolds, Peggy
name: Lacey, James
name: Bernstein, Leslie
name: Anton-Culver, Hoda
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer

description: Table S2. SNPs from Lin et al. [26] that are in strong LD (r2â  >â  0.5) with rs2293554. *Odds Ratio (OR), Lower Confidence Limit (LCL), and Upper Confidence Limit (UCL) as reported in Lin et at. [26]. (DOC 44 kb)
Cediopsylla simplex Baker
Creators: name: Reeves, Will K.
name: Durden, Lance A.
name: Ritzi, Christopher M.
name: Beckham, Katy R.
name: Super, Paul E
name: Oconnor, Barry M.
Publisher: name: Zenodo
Year: 2007
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Siphonaptera
Pulicidae
Cediopsylla
Cediopsylla simplex

description: Cediopsylla simplex (Baker) —rabbit flea
Ex Sylvilagus floridanus (eastern cottontail): 3F, GSMNP, 30 Mar. 1931, R. L. Boke (Fox 1940); 4F, TN, Sevier Co., Greenbrier, 1 Apr. 1931, R. L. Boke (Fox 1940); 1F, TN, Blount Co., 20 Nov. 1947, D. W. Pfitzer (Pfitzer 1950, Benton 1980, Durden & Kollars 1997).
As indicated by its vernacular name, the rabbit flea mainly parasitizes lagomorphs (Durden & Kollars 1997). This flea also forms short­term associations with predators of lagomorphs, such as foxes and dogs (Durden et al. 2005).
description: Published as part of Reeves, Will K., Durden, Lance A., Ritzi, Christopher M., Beckham, Katy R., Super, Paul E & Oconnor, Barry M., 2007, Ectoparasites and other ectosymbiotic arthropods of vertebrates in the Great Smoky Mountains National Park, USA, pp. 31-68 in Zootaxa 1392 on page 43, DOI: 10.5281/zenodo.273680
Additional file 1: Table S1. of Exploiting single-molecule transcript sequencing for eukaryotic gene prediction
Creators: name: Minoche, André
name: Dohm, Juliane
name: Schneider, Jessica
name: Holtgräwe, Daniela
name: Viehöver, Prisca
name: Montfort, Magda
name: Sörensen, Thomas Rosleff
name: Weisshaar, Bernd
name: Himmelbauer, Heinz
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Plant Biology
subject: Computational Biology

description: Gene model parameter training. (DOC 30 kb)
Additional file 2: of Evolutionary divergence of core and post-translational circadian clock genes in the pitcher-plant mosquito, Wyeomyia smithii
Creators: name: Tormey, Duncan
name: Colbourne, John
name: Keithanne Mockaitis
name: Jeong-Hyeon Choi
name: Lopez, Jacqueline
name: Burkhart, Joshua
name: Bradshaw, William
name: Holzapfel, Christina
Publisher: name: Figshare
Year: 2015
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: Ecology
subject: Cancer
subject: Plant Biology
subject: 60506 Virology

description: Maximum likelihood trees in Newick format; visualize with FigTree [ 116 ]. (DOC 28 kb)
Aurumcythere Weaver & Williams, gen. nov.
Creators: name: Weaver, Patricia G.
name: Williams, Bronwyn W.
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Ostracoda
Podocopida
Entocytheridae
Aurumcythere

description: Aurumcythere Weaver & Williams, gen. nov.
Type species. Aurumcythere tillmani Weaver & Williams, sp. nov.
Diagnosis. Carapace subovate to semi-elliptical with eyespot located near anterodorsal margin. Adults with well-developed respiratory plate and masticatory lobes; mandible with six teeth, terminal tooth larger than preceding teeth; antennule consisting of six podomeres; antennae consisting of four podomeres, flexor surface of dorsal apical antennal claw of male setiferous, antennal claws of adult female not conspicuously triunguis, ventral claw without pectinate prominences at base. Legs with short, hook-like terminal claws. Peniferum of adult male short, not extending beyond midpoint of clasping apparatus, without accessory groove or finger guard, distal end of peniferum blunt, with posteroventral hook and spur-like prominences, both curving in an anteroventral direction; spur originating from base of hook. Appendages not sclerotized.
Remarks. Aurumcythere gen. nov. differs from all other genera of Entocytherinae in having hook and spurlike prominences at the distal end of its peniferum. Although the peniferum of Psittocythere psitta Hobbs & Walton, 1975, known from Tennessee, USA, also bears a posteroventral hook, it lacks a spur-like prominence. Further, the entirety of the copulatory complex, including the structure of the hook and shape of the clasping apparatus, is vastly different. The overall shape of both the peniferum and clasping apparatus, and position of the clasping apparatus relative to the peniferum of Aurumcythere gen. nov. most closely resembles that of the notocytherine genus Herpetocythere Hart & Hart 1967, currently known only from Australia. In addition, several Herpetocythere species bear a hook on the distal end of the peniferum, which, although anteroventral, appear similar in structure to the hook found in Aurumcythere gen. nov. Despite several apparent morphological similarities, the presence of a well-developed respiratory lobe and presence of setae on the flexor surface of the dorsal antennal claw of the adult male in Aurumcythere gen. nov. preclude it from being a member of the Notocytherinae.
Etymology. Derived from the Latin aurum, meaning gold, as the taxon is known from a historic gold mining district. The suffix -cythere is the usual ending for generic names in the Entocytheridae.
description: Published as part of Weaver, Patricia G. & Williams, Bronwyn W., 2017, A new genus and species of entocytherid ostracod (Ostracoda: Entocytheridae) from the John Day River Basin of Oregon, U. S. A., with a key to genera of the subfamily Entocytherinae, pp. 576-586 in Zootaxa 4273 (4) on page 579, DOI: 10.11646/zootaxa.4273.4.7, http://zenodo.org/record/803808
Ctenocephalides felis Bouche
Creators: name: Reeves, Will K.
name: Durden, Lance A.
name: Ritzi, Christopher M.
name: Beckham, Katy R.
name: Super, Paul E
name: Oconnor, Barry M.
Publisher: name: Zenodo
Year: 2007
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Siphonaptera
Pulicidae
Ctenocephalides
Ctenocephalides felis

description: Ctenocephalides felis (Bouché) —cat flea
Ex Felis silvestris (catus) (domestic/feral cat): TN, Blount Co., 23 Nov. 1947, D. W. Pfitzer (Pfitzer 1950, Benton 1980, Durden & Kollars 1997).
Ex Homo sapiens (human): TN, Blount Co., near Elkmont, 15 Jan. 2005, M. McCaroll.
Like the previous species, this flea has a cosmopolitan distribution. Ctenocephalides felis is more common than C. canis in most regions and parasitizes several mammalian species such as cats, dogs, humans, and Virginia opossums (Durden & Kollars 1997). The cat flea is a potential vector or intermediate host of Acanthocheilonema reconditum, Bartonella henselae, Bartonella koehlerae, Bartonella quintana, Dipylidium caninum, Rickettsia felis, Rickettsia sp. RF 2125, Rickettsia sp. RF 31, and Rickettsia typhi (Durden & Traub 2002; Reeves et al. 2005b; Rolain et al. 2005).
description: Published as part of Reeves, Will K., Durden, Lance A., Ritzi, Christopher M., Beckham, Katy R., Super, Paul E & Oconnor, Barry M., 2007, Ectoparasites and other ectosymbiotic arthropods of vertebrates in the Great Smoky Mountains National Park, USA, pp. 31-68 in Zootaxa 1392 on page 44, DOI: 10.5281/zenodo.273680
Additional file 11: Figure S7. of Altered gut microbiota in Rett syndrome
Creators: name: Strati, Francesco
name: Cavalieri, Duccio
name: Albanese, Davide
name: Felice, Claudio De
name: Donati, Claudio
name: Joussef Hayek
name: Jousson, Olivier
name: Leoncini, Silvia
name: Pindo, Massimo
name: Renzi, Daniela
name: Rizzetto, Lisa
name: Stefanini, Irene
name: Calabrò, Antonio
name: Filippo, Carlotta De
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Bacterial taxa which relative abundances were significantly different (p
Leptinus orientamericanus Peck
Creators: name: Reeves, Will K.
name: Durden, Lance A.
name: Ritzi, Christopher M.
name: Beckham, Katy R.
name: Super, Paul E
name: Oconnor, Barry M.
Publisher: name: Zenodo
Year: 2007
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Leiodidae
Leptinus
Leptinus orientamericanus

description: Leptinus orientamericanus Peck *
Ex Blarina brevicauda (short tailed shrew): 3M, 3F, TN: Sevier Co., Indian Gap, 25 Nov. 1999, R. Eckerlan.
Ex Sorex fumeus (smoky shrew): 1M, TN, Sevier Co., Brushy Mount, 8 Apr. 2002, K. Walters, L­2983. This mammal nest beetle lives in the fur and nests of small mammals, especially insectivores, in eastern
North America (Peck 1982). The above records are the first for the Park.
description: Published as part of Reeves, Will K., Durden, Lance A., Ritzi, Christopher M., Beckham, Katy R., Super, Paul E & Oconnor, Barry M., 2007, Ectoparasites and other ectosymbiotic arthropods of vertebrates in the Great Smoky Mountains National Park, USA, pp. 31-68 in Zootaxa 1392 on page 44, DOI: 10.5281/zenodo.273680
Additional file 1: Figure S1. of Type I Interferon response in olfactory bulb, the site of tick-borne flavivirus accumulation, is primarily regulated by IPS-1
Creators: name: Chaitanya Kurhade
name: Zegenhagen, Loreen
name: Weber, Elvira
name: Nair, Sharmila
name: Michaelsen-Preusse, Kristin
name: Spanier, Julia
name: Gekara, Nelson
name: Kröger, Andrea
name: Överby, Anna
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: FOS: Biological sciences
subject: 60506 Virology

description: IPS-1 −/− mice have lower IFN-α levels in serum after LGTV infection compared to WT mice. WT and IPS-1 −/− mice were infected intraperitoneally with 104 FFU of LGTV, and serum samples were collected at indicated time points (n = 5–10). The amount of IFN-α in the mouse serum was determined by enzyme linked immunosorbent assay (ELISA) according to the manufacturer’s instructions (PBL). Significance was calculated with student’s T test, *p
DESAFIOS E OPORTUNIDADES DO CULTIVO DE TRIGO NO CERRADO
Creators: name: João Victor de Souza OLIVEIRA
name: Lucas Vinicius Müller CRISTINO
name: Ronaldo Pereira LIMA
Publisher: name: Zenodo
Year: 2024
Subjects: Cerrado
Brasil
Cultura de trigo

description: RESUMO

O presente estudo analisa o potencial da triticultura na região do Cerrado brasileiro, abordando tanto os benefícios quanto os desafios dessa expansão. Nos últimos anos, o Cerrado tem demonstrado um grande potencial para o cultivo do trigo, impulsionado por avanços tecnológicos, como o desenvolvimento de variedades adaptadas a condições adversas, incluindo doenças como a Brusone. A cultura do trigo oferece vantagens agronômicas importantes, como a melhoria da cobertura do solo e a diversificação no uso de princípios ativos no controle de políticas e doenças, além de permitir o uso de áreas ociosas. Entretanto, a pesquisa também ressalta os desafios, como a necessidade de adequação do manejo para lidar com o déficit hídrico e o impacto da supervisão nos custos de produção. O cultivo em sistema de sequeiro tem lista promissória, mas depende de práticas eficientes de manejo e supervisão. A produção de trigo no Cerrado ainda é incipiente, mas possui grande potencial para contribuir com a autossuficiência do Brasil, reduzindo a dependência de e fortalecendo a economia agrícola nacional. Portanto, o estudo destaca que, com a combinação adequada de tecnologia, manejo sustentável e políticas de incentivo, o Cerrado pode se tornar uma referência na produção de trigo no Brasil.
Additional file 15: Figure S10. of Altered gut microbiota in Rett syndrome
Creators: name: Strati, Francesco
name: Cavalieri, Duccio
name: Albanese, Davide
name: Felice, Claudio De
name: Donati, Claudio
name: Joussef Hayek
name: Jousson, Olivier
name: Leoncini, Silvia
name: Pindo, Massimo
name: Renzi, Daniela
name: Rizzetto, Lisa
name: Stefanini, Irene
name: CalabrĂ˛, Antonio
name: Filippo, Carlotta De
Publisher: name: Figshare
Year: 2016
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified

description: Genus level relative abundances of the fungal gut microbiota of healthy controls (HC) and Rett syndrome (RTT) subjects. (PDF 2981Â kb)
Euxiphidiopsis Gorochov 1993
Creators: name: Shi, Fu-Ming
name: Han, Li
name: Mao, Shao-Li
name: Bai, Jin-Rong
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Tettigoniidae
Euxiphidiopsis

description: Euxiphidiopsis Gorochov, 1993
Xiphidiopsis (Euxiphidiopsis) Gorochov. 1993. Zoosyst. Rossica, 2(1): 66; Type species: Xiphidiopsis (Euxiphidiopsis) motshulskyi Gorochov, 1993.
Euxiphidiopsis Liu & Zhang, 2000. Entomotaxonomia, 22 (3): 157; Liu, Zhou & Bi. 2010. In: Xu, H.-C. & Ye, T.-X. (Eds.) Insects of Fengyangshan National Nature Reserve, 82.
Paraxizicus Gorochov & Kang, 2005. In: Gorochov, Liu & Kang, Oriental Insects, 39: 71; Mao & Shi. 2007. Zootaxa, 1474: 63; Shi, Bian & Chang, 2011. Zootaxa, 2896: 37; Type species: Paraxizicus brevicercus Gorochov & Kang, 2005.
Generic diagnosis. Body medium size in Meconematinae. Head hypognathous; fastigium verticis conical, dorsally furrowed; eyes globular, protruding anteriorly; apical segment of maxillary palpus almost as long as subapical one, apex enlarged. Pronotum with an obviously posterior transverse sulcus, humeral sinus indistinct. Thoracic auditory spiracle completely free. Tegmina long, surpassing apices of postfemora; hind wings a little longer than tegmina.
Male tenth abdominal tergite with one or two posterior process, or without; sclerotized part of tenth tergite separated from epiproct by wide membranous area; epiproct rather small, simple, semimembranous, directed more or less downwards; cerci usually simple, or complex, with one process on baso-ventral area or without; subgenital plate almost trapezoid or rectangle; genitalia membranous. Ovipositor usually long, comparatively curved dorsad, ventral valvulae with hooked apices. Female subgenital plate small or comparatively large; cerci conical, straight or faintly curved. Disc of pronotum usually with a pair of lateral brown stripes.
description: Published as part of Shi, Fu-Ming, Han, Li, Mao, Shao-Li & Bai, Jin-Rong, 2014, Two new species of the genus Euxiphidiopsis Gorochov, 1993 (Orthoptera: Meconematinae) from China, pp. 387-391 in Zootaxa 3827 (3) on pages 387-388, DOI: 10.11646/zootaxa.3827.3.8, http://zenodo.org/record/224967
Additional file 2: Figure S2. of Type I Interferon response in olfactory bulb, the site of tick-borne flavivirus accumulation, is primarily regulated by IPS-1
Creators: name: Chaitanya Kurhade
name: Zegenhagen, Loreen
name: Weber, Elvira
name: Nair, Sharmila
name: Michaelsen-Preusse, Kristin
name: Spanier, Julia
name: Gekara, Nelson
name: Kröger, Andrea
name: Överby, Anna
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Pharmacology
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Computational Biology

description: Effect of IPS-1 signaling on BBB permeability upon LGTV infection. WT and IPS-1 −/− mice were mock or intraperitoneally infected with 104 FFU of LGTV (n = 3). Mice were intravenously injected with 100 μl 2 % Evans blue (Sigma) in PBS 4 and 7 dpi. After 1 h, animals were transcardially perfused with 20 ml PBS and the brains were removed. The brains were weighted and homogenized in 50 % TCA, and absorbance was measured at 610 nm. The absorbance was divided by the weight of the sample and normalized to mock infected samples. (PDF 42.5 KB)
Additional file 1: Annex 1. of Challenges of medicines management in the public and private sector under Ghanaâ  s National Health Insurance Scheme â   A qualitative study
Creators: name: Ashigbie, Paul
name: Devine Azameti
name: Wirtz, Veronika
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: Background of facilities of KIs interviewed (DOC 29 kb)
Additional file 2: Annex 2. of Challenges of medicines management in the public and private sector under Ghanaâ  s National Health Insurance Scheme â   A qualitative study
Creators: name: Ashigbie, Paul
name: Devine Azameti
name: Wirtz, Veronika
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Marine Biology
subject: Science Policy

description: Interview guide for key informants. This document is the interview guide used to collect data from private providers, public providers, suppliers and officials of the National Health Insurance Scheme. (PDF 260 kb)
Euxiphidiopsis erromena Shi & Mao, sp. nov.
Creators: name: Shi, Fu-Ming
name: Han, Li
name: Mao, Shao-Li
name: Bai, Jin-Rong
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Tettigoniidae
Euxiphidiopsis
Euxiphidiopsis erromena

description: 1 Euxiphidiopsis erromena Shi & Mao sp. nov.
Male Body slightly larger. Fastigium verticis conical, apex obtusely rounded, with a longitudinal sulcus. Eyes globular, prominent forwards. Apical segment of maxillary palpus almost as long as subapical one, apex enlarged. Pronotum comparatively long, anterior margin straight, posterior margin rounded; posterior transverse sulcus distinct; lateral lobes of pronotum longer than deep, humeral sinus indistinct. Thoracic auditory spiracle oval. Tegmina long, surpassing apices of postfemora; hind wings a little longer than tegmina. Femora of all legs without spines on ventral surface; procoxae with a spine, protibiae with 6 spines on inner side and 7 spines on outer side of ventral surface separately, the spines near base of protibiae longer, apical spines short; tibial tympana open on internal and external sides. Posttibiae with 30–32 spines on inner and outer sides of dorsal surface separately, and a pair of dorsal apical spurs and two pairs of ventral apical spurs. Tenth abdominal tergite with a conical posterior process, membranous area slightly broad. Epiproct small, semi-membranous. Cerci stout in base 2/3 part, inner surface concave, 1/3 apices thiner, incurved, separated into short dosal and ventral lobes. Subgenital plate with base slightly broad, narrowing, posterior margin truncate; styli long on apices of lateral margins of subgenital plate.
Coloration. Body green. Fastium verticis brown, apex light brown. Disc of head with 4 stripes, two stripes on inner area usually indistinct, the two outer stripes distinct. Pronotum with a pair of longitudinal brown stripes, the area between stripes light brown, the outer margins with a pair of yellow stripes. Stridulatory area light brown. Posterior process of tenth abdominal tergite yellowish brown.
Female. Unknown.
Type material. Holotype: male, Guangxi: Rongshui, Jiuwandashan, August 6, 2006, collected by Fu-Ming Shi and Shao-Li Mao.
Measurements (mm). Male: body: 12.0; pronotum: 5.0; tegmina: 21.0; postfemora: 13.0.
Discussion. The new species differs from known species of the genus in: 2/3 base of male cerci stout, inner surface concave, 1/3 apices thin, incurved, separated into dorsal and ventral short lobes.
Etymology. The name of the new species is derived from male’s cercus morphology.
Distribution. China (Guangxi).
description: Published as part of Shi, Fu-Ming, Han, Li, Mao, Shao-Li & Bai, Jin-Rong, 2014, Two new species of the genus Euxiphidiopsis Gorochov, 1993 (Orthoptera: Meconematinae) from China, pp. 387-391 in Zootaxa 3827 (3) on pages 388-389, DOI: 10.11646/zootaxa.3827.3.8, http://zenodo.org/record/224967
Additional file 6: Figure S4. of Altered gut microbiota in Rett syndrome
Creators: name: Strati, Francesco
name: Cavalieri, Duccio
name: Albanese, Davide
name: Felice, Claudio De
name: Donati, Claudio
name: Joussef Hayek
name: Jousson, Olivier
name: Leoncini, Silvia
name: Pindo, Massimo
name: Renzi, Daniela
name: Rizzetto, Lisa
name: Stefanini, Irene
name: Calabrò, Antonio
name: Filippo, Carlotta De
Publisher: name: Figshare
Year: 2016
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Plant Biology

description: Multiple-rarefaction PCoA plots. Each PCoA replicate was optimally superimposed by Procrustes analysis on the master PCoA scatter plot (used in the main text). Points represent the average location of 100 rarefaction replicates. Ellipses show the 95 % confidence region assuming a multivariate normal distribution. a) PCoA plots of bacterial beta-diversity based on the unweighted and weighted UniFrac distances and the Bray-Curtis dissimilarity analysed according to individuals’ health status; b) PCoA plots of fungal beta-diversity based on the unweighted and weighted UniFrac distances and the Bray-Curtis dissimilarity analysed according to individuals’ health status. Constipated Rett syndrome subjects (RTT-C), non-constipated Rett syndrome subjects (RTT-NC) and healthy controls (HC) are coloured in red, orange or green, respectively. (PDF 185 kb)
Additional file 3: Figure S3. of Type I Interferon response in olfactory bulb, the site of tick-borne flavivirus accumulation, is primarily regulated by IPS-1
Creators: name: Chaitanya Kurhade
name: Zegenhagen, Loreen
name: Weber, Elvira
name: Nair, Sharmila
name: Michaelsen-Preusse, Kristin
name: Spanier, Julia
name: Gekara, Nelson
name: Kröger, Andrea
name: Överby, Anna
Publisher: name: Figshare
Year: 2016
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology

description: IPS-1 does not influence the humoral response or cell composition or number in the spleen. WT and IPS-1 −/− mice were infected intraperitoneally with 104 FFU of LGTV. Spleens were harvested 4 and 7 dpi, and immune cells were isolated, counted, stained for various cell markers and analyzed by flow cytometry (n = 5–10). (A) Absolute cell numbers. (B) Total CD4+ T cells. (C) Total CD8+ cells. (D) Total B220+ cells. (E) Total CD11b+ cells. (F) Total CD11c+ cells. (G) Total NKT cells. (H) Total NK cells. (I) Total regulatory T (Treg) cells. (J) WT and IPS-1 −/− mice were mock or intraperitoneally infected with 104 FFU of LGTV, and the serum was isolated on 0, 4, and 7 dpi. Neutralizing antibody titers were determined by virus neutralization assay. Data represents mean with SEM of 5–10 mice in each group per time point. (PDF 20.6 KB)
Additional file 2: Table S2. of Genomic analysis of Ugandan and Rwandan chicken ecotypes using a 600Â k genotyping array
Creators: name: D. Fleming
name: J. Koltes
name: A. Markey
name: C. Schmidt
name: C. Ashwell
name: M. Rothschild
name: M. Persia
name: J. Reecy
name: S. Lamont
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Locations and relations of shared genes and statistically significant SNPs for iHS analysis. (DOCX 15 kb)
Protocalliphora sialia Shannon & Dobroscky
Creators: name: Reeves, Will K.
name: Durden, Lance A.
name: Ritzi, Christopher M.
name: Beckham, Katy R.
name: Super, Paul E
name: Oconnor, Barry M.
Publisher: name: Zenodo
Year: 2007
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Calliphoridae
Protocalliphora
Protocalliphora sialia

description: Protocalliphora sialia Shannon & Dobroscky
Ex Sialia sialis (eastern bluebird) nest: 9P, NC, Haywood Co., Purchase Knob, 23 Jul. 2002, W. K. Reeves.
Ex Turdus migratorius (American robin) nest: 1P, Swain Co., Smokemont sewage treatment building, 22 Aug. 2002, W. K. Reeves.
Reeves et al. (2004a) reported P. s i a l i a from the Park.
description: Published as part of Reeves, Will K., Durden, Lance A., Ritzi, Christopher M., Beckham, Katy R., Super, Paul E & Oconnor, Barry M., 2007, Ectoparasites and other ectosymbiotic arthropods of vertebrates in the Great Smoky Mountains National Park, USA, pp. 31-68 in Zootaxa 1392 on page 45, DOI: 10.5281/zenodo.273680