cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
An extrapolation-driven network architecture for physics-informed deep learning
Creators: name: Wang, Yong
name: Yao, Yanzhong
name: Gao, Zhiming
Publisher: name: arXiv
Year: 2024
Subjects: subject: Numerical Analysis (math.NA)
subject: FOS: Mathematics

description: Current PINN implementations with sequential learning strategies often experience some weaknesses, such as the failure to reproduce the previous training results when using a single network, the difficulty to strictly ensure continuity and smoothness at the time interval nodes when using multiple networks, and the increase in complexity and computational overhead. To overcome these shortcomings, we first investigate the extrapolation capability of the PINN method for time-dependent PDEs. Taking advantage of this extrapolation property, we generalize the training result obtained in a specific time subinterval to larger intervals by adding a correction term to the network parameters of the subinterval. The correction term is determined by further training with the sample points in the added subinterval. Secondly, by designing an extrapolation control function with special characteristics and combining it with a correction term, we construct a new neural network architecture whose network parameters are coupled with the time variable, which we call the extrapolation-driven network architecture. Based on this architecture, using a single neural network, we can obtain the overall PINN solution of the whole domain with the following two characteristics: (1) it completely inherits the local solution of the interval obtained from the previous training, (2) at the interval node, it strictly maintains the continuity and smoothness that the true solution has. The extrapolation-driven network architecture allows us to divide a large time domain into multiple subintervals and solve the time-dependent PDEs one by one in a chronological order. This training scheme respects the causality principle and effectively overcomes the difficulties of the conventional PINN method in solving the evolution equation on a large time domain. Numerical experiments verify the performance of our method.
Additional file 3: of Genetic and phenotypic variation along an ecological gradient in lake trout Salvelinus namaycush
Creators: name: Baillie, Shauna
name: Muir, Andrew
name: Hansen, Michael
name: Krueger, Charles
name: Bentzen, Paul
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Allelic diversity in the combined sample of 371 lake trout from Isle Royale, Lake Superior. Columns indicate the number of individuals genotyped (N), mean number of alleles (A), observed heterozygosity (Ho), expected heterozygosity (He), inbreeding coefficient (Fis) and the P-values of Hardy-Weinberg equilibrium (HW). Asterisks mark entries with P-values that remain significant after sequential goodness of fit correction for multiple comparisons in â  SGoFâ   3.8 [58]. (DOCX 22 kb)
Additional file 2: of Insertion of a xylanase in xylose binding protein results in a xylose-stimulated xylanase
Creators: name: Ribeiro, Lucas
name: Nicholes, Nathan
name: Tullman, Jennifer
name: Ribeiro, Liliane
name: Fuzo, Carlos
name: Davi Vieira
name: Gilvan Furtado
name: Ostermeier, Marc
name: Ward, Richard
Publisher: name: Figshare
Year: 2015
Subjects: subject: Space Science
subject: Molecular Biology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Table S1. Oligonucleotides used for the construction of the linker libraries at XBP positions 209 and 262.
Viburnum tinus Linnaeus 1753
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Dipsacales
Adoxaceae
Viburnum
Viburnum tinus

description: Viburnum tinus Linnaeus, Species Plantarum 1: 267. 1753.
"Habitat in Lusitania, Hispania, Italia." RCN: 2129.
Lectotype (Ali in Ali & Jafri, Fl. Libya 24: 3. 1977): Herb. Linn. No. 379.1 (LINN).
Current name: Viburnum tinus L. (Caprifoliaceae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part V), pp. 911-926 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 921, DOI: 10.5281/zenodo.291971
A mapping-free NLP-based technique for sequence search in Nanopore long-reads
Creators: name: Strzoda, Tomasz
name: Cruz-Garcia, Lourdes
name: Najim, Mustafa
name: Badie, Christophe
name: Polanska, Joanna
Publisher: name: arXiv
Year: 2024
Subjects: subject: Genomics (q-bio.GN)
subject: FOS: Biological sciences

description: In unforeseen situations, such as nuclear power plant's or civilian radiation accidents, there is a need for effective and computationally inexpensive methods to determine the expression level of a selected gene panel, allowing for rough dose estimates in thousands of donors. The new generation in-situ mapper, fast and of low energy consumption, working at the level of single nanopore output, is in demand. We aim to create a sequence identification tool that utilizes Natural Language Processing (NLP) techniques and ensures a high level of negative predictive value (NPV) compared to the classical approach. The training dataset consisted of RNASeq data from 6 samples. Having tested multiple NLP models, the best configuration analyses the entire sequence and uses a word length of 3 base pairs with one-word neighbor on each side. For the considered FDXR gene, the achieved mean balanced accuracy (BACC) was 98.29% and NPV 99.25%, compared to minimap2's performance in a cross-validation scenario. Reducing the dictionary from 1024 to 145 changed BACC to 96.49% and the NPV to 98.15%. Obtained NLP model, validated on an external independent genome sequencing dataset, gave NPV of 99.64% for complete and 95.87% for reduced dictionary. The salmon-estimated read counts differed from the classical approach on average by 3.48% for the complete dictionary and by 5.82% for the reduced one. We conclude that for long Oxford Nanopore reads, an NLP-based approach can successfully replace classical mapping in case of emergency. The developed NLP model can be easily retrained to identify selected transcripts and/or work with various long-read sequencing techniques. Our results of the study clearly demonstrate the potential of applying techniques known from classical text processing to nucleotide sequences and represent a significant advancement in this field of science.
description: 25 pages, 9 figures
Additional file 2: of Identifying environmental versus phylogenetic correlates of behavioural ecology in gibbons: implications for conservation management of the worldâ  s rarest ape
Creators: name: Bryant, Jessica
name: ValĂŠrie Olson
name: Chatterjee, Helen
name: Turvey, Samuel
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: Plant Biology

description: Assessment of effect of phylogenetic uncertainty in the form of alternative tree topologies on phylogenetic signals within the Hylobatidae. (PDF 770Â kb)
Vicia sativa subsp. amphicarpa Linnaeus 1763
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Fabales
Fabaceae
Vicia
Vicia sativa
Vicia sativa l. subsp. amphicarpa (l.) batt.

description: Vicia amphicarpa Linnaeus, Species Plantarum, ed. 2, 2: 1030. 1763.
RCN: 5387.
Lectotype (Romero Zarco in Anales Jard. Bot. Madrid 56: 178. 1998): [icon] " An Theophrasti araco homoion? " in Clusius, Exot. Libri: 87, 88. 1605.
Current name: Vicia sativa L. subsp. amphicarpa (L.) Batt. (Fabaceae: Faboideae).
Note: This binomial appears in a footnote at the end of an account of Lathyrus amphicarpus L., accompanied by a reference to a Clusius description and illustration. The binomial was previously attributed to Dorthes (in J. Phys. Chim. Hist. Nat. Arts 35: 131. 1789), but Romero Zarco has recently accepted Linnaeus’ statement as valid publication of the name and also lectotypified V. amphicarpa L.
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part V), pp. 911-926 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 921, DOI: 10.5281/zenodo.291971
Additional file 1: of Genetic and phenotypic variation along an ecological gradient in lake trout Salvelinus namaycush
Creators: name: Baillie, Shauna
name: Muir, Andrew
name: Hansen, Michael
name: Krueger, Charles
name: Bentzen, Paul
Publisher: name: Figshare
Year: 2016
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Landmark order and placement for digitizing head and body shape of lake trout. (DOCX 397 kb)
Tuning electronic pairing by uniaxial strain in kagome lattices
Creators: name: Mojarro, M. A.
name: Ulloa, Sergio E.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: We study the interplay of attractive electron interactions and topological states in strained kagome lattices with spin-orbit coupling via a Hubbard Hamiltonian in the mean-field approximation. In the unstrained lattice, there is a topological phase transition from a quantum spin Hall state to a charge density wave (CDW) with increasing interaction strength. Upon applying a uniform uniaxial strain to the lattice, we find a new phase with coexisting CDWs and topological states. For increasing interaction strength or strain, the system is driven into a pure CDW, signaling topological phase transitions. The directionality (nematicity) of the CDW is controlled by the direction of the applied strain. When $s$ wave electronic pairing is allowed, the system develops a superconducting order beyond a threshold attraction, which is totally suppressed by the onset of a CDW with increasing interaction. Most interestingly, moderate strain allows the coexistence of superconductivity and CDWs for a range of interaction values. This illustrates how electronic interactions and single-particle topological structures compete to create unusual correlated phases in kagome systems.
Vicia sativa subsp. nigra Linnaeus 1763
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Fabales
Fabaceae
Vicia
Vicia sativa
Vicia sativa l. subsp. nigra ehrh.

description: Vicia angustifolia Linnaeus, Amoenitates Academicae 4: 105. 1759.
Lectotype (Verdcourt in Milne-Redhead & Polhill, Fl. Trop. E. Africa, Leguminosae 4: 1069. 1971): England. Oxford, Shotover Hill. Bobart s.n. in Herb. Morison (OXF).
Current name: Vicia sativa L. subsp. nigra Ehrh. (Fabaceae: Faboideae).
Note: See Stearn (Introd. Ray’s Syn. Meth. Stirp. Brit. (Ray Soc. ed.): 68. 1973). Linnaeus’ name is validated solely by reference to Ray, and Verdcourt’s chosen lectotype was selected from material cited by Ray.
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part V), pp. 911-926 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 921, DOI: 10.5281/zenodo.291971
Katha Moore 1878
Creators: name: Joshi, Rahul
name: Singh, Navneet
name: Singh, Jagbir
Publisher: name: Zenodo
Year: 2018
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Erebidae
Katha

description: Genus Katha Moore, 1878
Moore, 1878, Proceedings of the General Meetings for Scientific Business of the Zoological Society of London, 1878: 16.
Type species: Bombyx helvola Hübner, [1803] 1796 (= deplana Esper, 1787).
Diagnosis: Morphologically, Katha Moore is closely similar to genus Tarika Moore. Both the genera are diagnosed by long and almost unicoloured forewings; in male genitalia both valvae present with an ovoid costal process, a hook – like distal saccular process (long in Katha brevivalva and K. magnata), and juxta lacks an apical process. Both genera are distinct from each other in the following characters: presence of numerous, spine-like cornuti at the base of vesica, and short, wide, triangular harpe in Tarika, and an absent harpe, vesica with few strongly built spines and spined plates in most species of Katha. However, one of the either character of vesica may be absent in some species of Katha.
description: Published as part of Joshi, Rahul, Singh, Navneet & Singh, Jagbir, 2018, Description of a new Katha species from India, with a key to the Oriental species (Lepidoptera, Erebidae, Arctiinae), pp. 435-442 in Zootaxa 4407 (3) on page 436, DOI: 10.11646/zootaxa.4407.3.10, http://zenodo.org/record/1216526
Additional file 1: of Effectiveness of advice from physician and nurse on smoking cessation stage in Taiwanese male smokers attending a community-based integrated screening program
Creators: name: Dih-Ling Luh
name: Chen, Sam
name: Yen, Amy
name: Chiu, Sherry
name: Ching-Yuan Fann
name: Hsiu-Hsi Chen
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 60506 Virology

description: Implementation procedure and data collection. (DOC 25 kb)
title:  FROM BUSHELS TO BARRELS: A DESCRIPTIVE ANALYSIS OF THE U.S. WHISKEY INDUSTRY
Creators: name: Murphy, Ryan
Publisher: name: University of Kentucky Libraries
Year: 2024
Subjects: classificationCode: 4
subject: FOS: Agricultural sciences

description: This thesis provides a comprehensive analysis of the U.S. whiskey industry, emphasizing distilleries' geographic distribution, operational characteristics, and the agricultural landscapes surrounding them. Particular attention is given to the feasibility of U.S. distilleries locally sourcing grains used in production. Grain demand ranges were estimated for the 1,485 distilleries analyzed within this study. Using cropland and yield data from the USDA, local grain availability was approximated for comparison. Results indicate that a distillery's local sourcing feasibility is significantly impacted by its production capacity and geographic location.

Additionally, this research documents the development of an interactive web application designed to evaluate the feasibility of locally sourcing grains for individual distilleries. The application integrates geospatial and agricultural data to provide distilleries with tailored insights into the agricultural and competitive landscapes within surrounding local areas.

Together, these analyses shed light on the grain-sourcing dynamics of the U.S. whiskey industry and highlight the potential opportunities and challenges of locally sourced grains.
Additional file 3: of Identifying environmental versus phylogenetic correlates of behavioural ecology in gibbons: implications for conservation management of the world’s rarest ape
Creators: name: Bryant, Jessica
name: Olson, Valérie
name: Chatterjee, Helen
name: Turvey, Samuel
Publisher: name: Figshare
Year: 2015
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: Plant Biology

description: Global multiple regression linear mixed-effects kinship models incorporating all significant predictors ( P
RESPONSIBILITY OF THE INITIATOR IN CROWDFUNDING ACTIVITIES
Creators: name: Qalandarov, Aminjon
Publisher: name: Zenodo
Year: 2024

description: Ensuring civil liability in crowdfunding activities is one of the important issues, as projects implemented through the platform involve various parties - project creators (initiators), platform operators, and investors (or supporters). Each party has its own rights and obligations, the fulfillment of which creates civil liability based on the contract. Failure to comply with the terms of the contract or non-compliance with the law may result in liability.
Additional file 1: of Identifying environmental versus phylogenetic correlates of behavioural ecology in gibbons: implications for conservation management of the worldâ  s rarest ape
Creators: name: Bryant, Jessica
name: ValĂŠrie Olson
name: Chatterjee, Helen
name: Turvey, Samuel
Publisher: name: Figshare
Year: 2015
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy

description: Sources of gibbon comparative data for three response variables (home range, group size, mating system) by species and site (gibbon population). (DOCX 50Â kb)
Investigating the Impact of Social Norm Messaging in Reducing Distracted Driving Behaviours in Young Adults
Creators: name: Nicolls, Michelle
Publisher: name: University of the Sunshine Coast, Queensland
Year: 2024
Subjects: hand-held phone use while driving
distracted driving
young drivers
social norm theroy
social norm approach
descriptive norm
injnctive norm
peer influence
behavioural change
messaging
Social and personality psychology

description: Hand-held phone use while driving is a significant road safety issue. Despite the use of strategies to prevent hand-held phone use while driving (e.g., through legal sanctions and road safety messaging campaigns), drivers continue to engage in the behaviour, with the highest prevalence among young adults. As such, it is important to explore additional strategies to reduce this behaviour among this high-risk cohort. This program of work explored the utility of the social norm approach in reducing engagement in hand-held phone use while driving among young drivers. The overall aims of this research were to: (a) identify the relative influence of perceived social norms on young drivers’ engagement in hand-held phone use while driving, and (b) test the impact of the social norm approach in reducing young drivers’ engagement in hand-held phone use while driving.
Katha volynkini Joshi & Singh & Singh 2018, sp. nov.
Creators: name: Joshi, Rahul
name: Singh, Navneet
name: Singh, Jagbir
Publisher: name: Zenodo
Year: 2018
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Erebidae
Katha
Katha volynkini

description: Katha volynkini Joshi & Singh, sp. nov.
(Figs. 1, 13–14)
Type locality: Garampani, Meghalaya, India.
Type material: Holotype, ♂, INDIA, Meghalaya, Garampani, 09.IX.09 (Coll. R Joshi; Reg. no. PUP /RJ/135). One paratype: INDIA, Mizoram, Champhai, 27.IX.09 – 1♂.(Coll. R. Joshi; Reg. no. PUP/RJ/135a).
Description: Adult (Fig. 1). Forewing length 14mm.Head with frons brown; vertex yellow. Antennae simple, brown. Labial palpi yellow, black at tips. Thorax with patagia and tegulae dark yellow; pectus pale yellow. Forewing creamish yellow with velvety texture; apex with more tinge of yellow; a deep groove from base of cell to tornus; underside minutely suffused with fuscous, termen pale; inner margin excurved at subbasal area. Hindwing concolourous. Legs black, suffused with some yellow on forelegs. Abdomen yellowish with some white at base. Male genitalia(Fig. 13) with uncus broad, sparsely setose, apically hooked; tegumen smaller than the very long vinculum; saccus deep v-shaped, with knob-like tip. Valvae typical of the genus, distal saccular process ending in a small spine. Juxta rectangular. Aedeagus (Fig. 14) moderately short and broad; vesica four lobed, apical lobe with female shoe shaped spine and basal lobe with a stout, blade-like spine; one lateral lobe with a dentate sclerotized plate, another with a field of minute spines.
Diagnosis: Externally, the species of Katha are very similar to each other and are better diagnosed on the basis of male genitalia. Due to the absence of apical spine in aedeagus, and presence of two spines and a dentate plate in vesica, K. volynkini sp. nov. (Figs. 1, 13–14) is closely similar to K. conformis (Figs. 2, 15–16) but can be distinguished from it in the following attributes: a field of minute spines on a lobe opposite to the dentate plate is present; apical lobe of vesica is short with a female shoe shaped apical spine, vinculum broad “v”-shaped and saccus knobbed. Whereas, K. conformis lacks the field of minute spines, characteristic for the new species; the apical lobe of vesica is tubular with a nail like apical spine; the vinculum is narrow, “v”-shaped and the saccus is simple. Other closely related species is K. suffusa, which differs from the new species in the presence of single spine in vesica.
Etymology: The species name is dedicated to Dr. Anton Volynkin, Arctiinae specialist from Tomsk, Russia.
description: Published as part of Joshi, Rahul, Singh, Navneet & Singh, Jagbir, 2018, Description of a new Katha species from India, with a key to the Oriental species (Lepidoptera, Erebidae, Arctiinae), pp. 435-442 in Zootaxa 4407 (3) on page 436, DOI: 10.11646/zootaxa.4407.3.10, http://zenodo.org/record/1216526
Vicia benghalensis Linnaeus 1753
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Fabales
Fabaceae
Vicia
Vicia benghalensis

description: Vicia benghalensis Linnaeus, Species Plantarum 2: 736. 1753.
"Habitat in Benghala." RCN: 5414.
Lectotype (Verdcourt in Milne-Redhead & Polhill, Fl. Trop. E. Africa, Leguminosae 4: 1073. 1971): Herb. Linn. No. 906.18 (LINN).
Current name: Vicia benghalensis L. (Fabaceae: Faboideae).
Note: Romero Zarco (in Anales Jard. Bot. Madrid 56: 178. 1998) designated the cited Hermann plate as lectotype but this choice is pre-dated by that of Verdcourt.
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part V), pp. 911-926 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 921, DOI: 10.5281/zenodo.291971
Additional file 1: Table S1. of Prevalence of Gestational Diabetes Mellitus in urban and rural Tamil Nadu using IADPSG and WHO 1999 criteria (WINGS 6)
Creators: name: Balaji Bhavadharini
name: Manni Mahalakshmi
name: Anjana, Ranjit
name: Maheswari, Kumar
name: Uma, Ram
name: Deepa, Mohan
name: Unnikrishnan, Ranjit
name: Ranjani, Harish
name: Sonak Pastakia
name: Arivudainambi Kayal
name: Ninov, Lyudmil
name: Malanda, Belma
name: Belton, Anne
name: Viswanathan Mohan
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Difference between those who participated and those who refused to participate. (DOC 33 kb)
Additional file 4: of Identifying environmental versus phylogenetic correlates of behavioural ecology in gibbons: implications for conservation management of the world’s rarest ape
Creators: name: Bryant, Jessica
name: Olson, Valérie
name: Chatterjee, Helen
name: Turvey, Samuel
Publisher: name: Figshare
Year: 2015
Subjects: subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy

description: Ranking of candidate models (representing all possible combinations of the five predictors in each global model) by AICc, along with relative log-likelihood (RLL), ΔAICc, and model Akaike weights ( w i ) for: a) home range and b) group size. (DOCX 25 kb)
Additional file 1: of A rational two-step approach to KRAS mutation testing in colorectal cancer using high resolution melting analysis and pyrosequencing
Creators: name: Mack, Elisabeth
name: Stabla, Kathleen
name: Riera-Knorrenschild, Jorge
name: Moll, Roland
name: Neubauer, Andreas
name: Brendel, Cornelia
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 60506 Virology

description: Supplementary method and Table S1. HRM analysis of NRAS codon 61 and Results of NRAS codon 61 mutation testing in 19 CRC samples. (DOCX 22Â kb)
Vicia biennis Linnaeus 1753
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Fabales
Fabaceae
Vicia
Vicia biennis

description: Vicia biennis Linnaeus, Species Plantarum 2: 736. 1753.
"Habitat in Sibiria." RCN: 5413.
Lectotype (Hanelt & Mettin in Kulturpflanze 10: 48, Abb. 1. 1962): Herb. Linn. No. 906.16 (LINN).
Current name: Vicia biennis L. (Fabaceae: Faboideae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part V), pp. 911-926 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 921, DOI: 10.5281/zenodo.291971
KANQAS: Kolmogorov-Arnold Network for Quantum Architecture Search
Creators: name: Kundu, Akash
name: Sarkar, Aritra
name: Sadhu, Abhishek
Publisher: name: arXiv
Year: 2024
Subjects: subject: Quantum Physics (quant-ph)
subject: Artificial Intelligence (cs.AI)
subject: Emerging Technologies (cs.ET)
subject: Machine Learning (cs.LG)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: Quantum architecture Search (QAS) is a promising direction for optimization and automated design of quantum circuits towards quantum advantage. Recent techniques in QAS emphasize Multi-Layer Perceptron (MLP)-based deep Q-networks. However, their interpretability remains challenging due to the large number of learnable parameters and the complexities involved in selecting appropriate activation functions. In this work, to overcome these challenges, we utilize the Kolmogorov-Arnold Network (KAN) in the QAS algorithm, analyzing their efficiency in the task of quantum state preparation and quantum chemistry. In quantum state preparation, our results show that in a noiseless scenario, the probability of success is 2 to 5 times higher than MLPs. In noisy environments, KAN outperforms MLPs in fidelity when approximating these states, showcasing its robustness against noise. In tackling quantum chemistry problems, we enhance the recently proposed QAS algorithm by integrating curriculum reinforcement learning with a KAN structure. This facilitates a more efficient design of parameterized quantum circuits by reducing the number of required 2-qubit gates and circuit depth. Further investigation reveals that KAN requires a significantly smaller number of learnable parameters compared to MLPs; however, the average time of executing each episode for KAN is higher.
description: Code available at: https://github.com/Aqasch/KANQAS_code
Additional file 1: of Breast cancer literacy among higher secondary students: results from a cross-sectional study in Western Nepal
Creators: name: Parash Bhandari
name: Thapa, Kiran
name: Dhakal, Sarmila
name: Shristi Bhochhibhoya
name: Deuja, Rashmi
name: Acharya, Pawan
name: Mishra, Shiva
Publisher: name: Figshare
Year: 2016
Subjects: subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Questionnaire. (PDF 56 kb)
Katha deplana Esper
Creators: name: Joshi, Rahul
name: Singh, Navneet
name: Singh, Jagbir
Publisher: name: Zenodo
Year: 2018
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Erebidae
Katha
Katha deplana

description: Katha deplana (Esper)
Noctua deplana Esper, 1787: 97
Bombyx helvola Hübner, [1803] 1796, Samml. Eur. Schmett. 3: pl. 23
TL: Japan
Distribution: Northern Eurasia (Dubatolov & Zolotuhin 2011)
description: Published as part of Joshi, Rahul, Singh, Navneet & Singh, Jagbir, 2018, Description of a new Katha species from India, with a key to the Oriental species (Lepidoptera, Erebidae, Arctiinae), pp. 435-442 in Zootaxa 4407 (3) on page 438, DOI: 10.11646/zootaxa.4407.3.10, http://zenodo.org/record/1216526
MOESM2 of
                     Plasmodium infection and oxidative status in breeding great tits, Parus major
Creators: name: Delhaye, Jessica
name: Jenkins, Tania
name: Christe, Philippe
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: Geology
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Computational Biology

description: Additional file 2. Minimal adequate models of oxidative status markers. The markers are i) superoxide production (superoxide production corrected for mitochondria quantity; ntotal = 141, nsub-adult/adult = 47/94, nfemale/male = 70/71, nuninfected/infected = 80/61), ii) reactive oxygen metabolites (ROMs, square root transformed; ntotal = 134, nsub-adult/adult = 43/91, nfemale/male = 65/69, nuninfected/infected = 73/61), iii) RBC membrane resistance to oxidative attack (ntotal = 133, nsub-adult/adult = 50/83, nfemale/male = 67/66, nuninfected/infected = 75/58) and iv) plasma antioxidant capacity (log transformed; ntotal = 69, nsub-adult/adult = 16/53, nfemale/male = 34/35, nuninfected/infected = 43/26) and the models considered reproductive effort as clutch size. Minimal models are given in bold with intercept, as well as estimate, standard error (se), t value and p value for each term. Non-significant terms that were tested, are given with the p value of the likelihood ratio test before being dropped out of the model.
Vicia bithynica Linnaeus 1759
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Fabales
Fabaceae
Vicia
Vicia bithynica

description: Vicia bithynica (Linnaeus) Linnaeus, Systema Naturae, ed. 10, 2: 1166. 1759.
["Habitat in Italiae, Bavariae, arvis."] Sp. Pl. 2: 731 (1753). RCN: 5421.
Basionym: Lathyrus bithynicus L. (1753).
Lectotype (Ali in Bot. Not. 120: 48. 1967): Herb. Linn. No. 906.19 (LINN).
Current name: Vicia bithynica (L.) L. (Fabaceae: Faboideae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part V), pp. 911-926 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 921, DOI: 10.5281/zenodo.291971
title:  Communicating Climate Change
title: Adaptive Silviculture in Central Appalachian Kentucky
titleType: Subtitle
Creators: name: Baker, Logan
Publisher: name: University of Kentucky Libraries
Year: 2024
Subjects: classificationCode: 4.1
subject: FOS: Agriculture, forestry and fisheries

description: Climate change communication is an emerging field that requires a multidisciplinary understanding of both climate and social science. Communicating with underrepresented woodland owners about climate change, specifically climate change adaptation in forestry applications, necessitates appropriately adjusted approaches. In Central Appalachian Kentucky, outreach with underrepresented woodland owners on forest adaptation topics has not been examined in depth. The recent establishment of an Adaptive Silviculture for Climate Change research site in the University of Kentucky’s Robinson Forest has created an opportunity to generate regionally specific climate adaptation information for Appalachian Kentucky forests. It is imperative to investigate how best to approach communicating these climate adaptive silviculture concepts to private woodland owners in Central Appalachian Kentucky, especially for woodland owners belonging to underrepresented groups. An exploratory focus group was conducted in Breathitt County with underrepresented woodland owners, and included questions on adaptive silviculture and active forest management. Findings from this focus group included hesitancy around climate adaptive practices, enthusiasm for active forest management, and the identification of major barriers to implementing active management practices. The implications of these findings suggest that community-informed information sharing and outreach could be beneficial to communicating climate-focused forest management practices with underrepresented woodland owners in Central Appalachian Kentucky.
MOESM3 of
                     Plasmodium infection and oxidative status in breeding great tits, Parus major
Creators: name: Delhaye, Jessica
name: Jenkins, Tania
name: Christe, Philippe
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Ecology
subject: Plant Biology

description: Additional file 3. Minimal adequate models of superoxide production not corrected for mitochondria quantity. RBC superoxide production was log transformed and RBC mitochondria quantity was square root transformed (ntotal = 141, nsub-adult/adult = 47/94, nfemale/male = 70/71, nuninfected/infected = 80/61). The models considered reproductive effort as A: brood size and B: clutch size. Minimal models are given in bold with intercept, as well as estimate, standard error (se), t-value and p-value for each term. Non-significant terms that were tested, are given with the p-value of the likelihood ratio test before being dropped out of the model.
Vicia cassubica Linnaeus 1753
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Fabales
Fabaceae
Vicia
Vicia cassubica

description: Vicia cassubica Linnaeus, Species Plantarum 2: 735. 1753.
"Habitat in Germania." RCN: 5409.
Lectotype (Jonsell & Jarvis in Nordic J. Bot. 22: 78. 2002): Herb. Clifford: 368, Vicia 1 (BM-000646679).
Current name: Vicia cassubica L. (Fabaceae: Faboideae).
Note: Stankevicz (in Novosti Sist. Vyssh. Rast. 18: 213. 1981) indicated 901.11 (LINN) as type. However, this sheet corresponds with Glycine bituminosa L., and is not original material for V. cassubica.
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part V), pp. 911-926 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 921, DOI: 10.5281/zenodo.291971
Katha conformis Walker
Creators: name: Joshi, Rahul
name: Singh, Navneet
name: Singh, Jagbir
Publisher: name: Zenodo
Year: 2018
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Erebidae
Katha
Katha conformis

description: Katha conformis (Walker)
Lithosia conformis Walker, 1854, List Sp. lepid. Insects Colln Br. Mus. 2: 509.
Lithosia nigrifrons Moore, 1878, Proc. zool. Soc. Lond.1878: 17.
Eilema chekiangica Daniel, 1954; Kishida, 2011, Moths of Guangdong Nanling National Nature Reserve: 219.
TL: Sikkim (India)
Distribution: India (Walker 1854); Thailand (Cerny & Pinratana 2009); China: Shanxi, Shanxi, Zhejiang, Fujian, Jiangxi, Hunan, Guangxi, Sichuan, Guizhou, Hubei, Yunnan (Fang 2000); Guangdong (Dubatolov et al. 2012).
description: Published as part of Joshi, Rahul, Singh, Navneet & Singh, Jagbir, 2018, Description of a new Katha species from India, with a key to the Oriental species (Lepidoptera, Erebidae, Arctiinae), pp. 435-442 in Zootaxa 4407 (3) on page 438, DOI: 10.11646/zootaxa.4407.3.10, http://zenodo.org/record/1216526
title: Fortpflanzungsbiologie III - Sekundärer Generationswechsel; [ca. 1970]
title: Metagenese bei der Ohrenqualle. Qualle, Gameten, Planulalarve, junger Polyp, Scyphostoma, Strobila, Ephyralarve. Heterogonie bei der Reblaus. befrucht. Winterei. Gallenlaus. Wurzellaus. Sexupare. Eier ; [Lehrtafel]
titleType: Subtitle
Creators: name: (:Unav)
Publisher: name: Universitätsbibliothek der Ludwig-Maximilians-Universität München
Year: 2023

description: Papier auf Leinwand mit Holzbestäbung
Additional file 1: Figure S1. of Combining carbon ion irradiation and non-homologous end-joining repair inhibitor NU7026 efficiently kills cancer cells
Creators: name: Hongyu Ma
name: Takahashi, Akihisa
name: Yoshida, Yukari
name: Adachi, Akiko
name: Tatsuaki Kanai
name: Ohno, Tatsuya
name: Nakano, Takashi
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biophysics
subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Molecular Biology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: Cancer
subject: Hematology

description: Survival curves after radiation exposure with NU7026 or B02 treatment in human glioblastoma cells. A172 cells (A and B), U251MG cells (C and D). NU7026 treatment (A and C), B02 treatment (B and D). The presented results are the mean and SD of three independent experiments. Data were statistically evaluated with student’s t test with comparisons between inhibitor alone and other treated groups (* p
Vicia cracca Linnaeus 1753
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Fabales
Fabaceae
Vicia
Vicia cracca

description: Vicia cracca Linnaeus, Species Plantarum 2: 735. 1753.
"Habitat in Europae pratis, agris." RCN: 5410.
Lectotype (Chrtková-Žertová in Rechinger, Fl. Iranica 140: 29. 1979): Herb. Clifford: 368, Vicia 2 (BM).
Current name: Vicia cracca L. (Fabaceae: Faboideae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part V), pp. 911-926 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 921, DOI: 10.5281/zenodo.291971
Katha pulvereola Hampson
Creators: name: Joshi, Rahul
name: Singh, Navneet
name: Singh, Jagbir
Publisher: name: Zenodo
Year: 2018
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Erebidae
Katha
Katha pulvereola

description: Katha pulvereola (Hampson)
Ilema pulvereola Hampson, 1900, Cat. Lepid. Phalaenae Br. Mus., 2:170.
TL: SE Borneo
Distribution: Borneo, Peninsular Malaysia (Bucsek 2012).
description: Published as part of Joshi, Rahul, Singh, Navneet & Singh, Jagbir, 2018, Description of a new Katha species from India, with a key to the Oriental species (Lepidoptera, Erebidae, Arctiinae), pp. 435-442 in Zootaxa 4407 (3) on page 438, DOI: 10.11646/zootaxa.4407.3.10, http://zenodo.org/record/1216526
Lattice QCD Calculation of $x$-dependent Meson Distribution Amplitudes at Physical Pion Mass with Threshold Logarithm Resummation
Creators: name: Cloet, Ian
name: Gao, Xiang
name: Mukherjee, Swagato
name: Syritsyn, Sergey
name: Karthik, Nikhil
name: Petreczky, Peter
name: Zhang, Rui
name: Zhao, Yong
Publisher: name: arXiv
Year: 2024
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: High Energy Physics - Experiment (hep-ex)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We present a lattice quantum chromodynamics (QCD) calculation of the $x$-dependent pion and kaon distribution amplitudes (DA) in the framework of large momentum effective theory. This calculation is performed on a fine lattice of $a=0.076$ fm at physical pion mass, with the pion boosted to $1.8$ GeV and kaon boosted to $2.3$ GeV. We renormalize the matrix elements in the hybrid scheme and match to $\overline{\rm MS }$ with a subtraction of the leading renormalon in the Wilson-line mass. The perturbative matching is improved by resumming the large logarithms related to the small quark and gluon momenta in the soft-gluon limit. After resummation, we demonstrate that we are able to calculate a range of $x\in[x_0,1-x_0]$ with $x_0=0.25$ for pion and $x_0=0.2$ for kaon with theoretical systematic errors under control. The kaon DA is shown to be slighted skewed, and narrower than pion DA. Although the $x$-dependence cannot be direct calculated beyond these ranges, we estimate higher moments of the pion and kaon DAs by complementing our calculation with short-distance factorization.
description: Update to the published version in PRD
Vicia dumetorum Linnaeus 1753
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Fabales
Fabaceae
Vicia
Vicia dumetorum

description: Vicia dumetorum Linnaeus, Species Plantarum 2: 734. 1753.
"Habitat in Thuringia, Gallia." RCN: 5407.
Lectotype (Lassen inTurland & Jarvis in Taxon 46: 483. 1997): Herb. Linn. No. 906.3 (LINN).
Current name: Vicia dumetorum L. (Fabaceae: Faboideae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part V), pp. 911-926 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 922, DOI: 10.5281/zenodo.291971
Katha magnata Matsumura
Creators: name: Joshi, Rahul
name: Singh, Navneet
name: Singh, Jagbir
Publisher: name: Zenodo
Year: 2018
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Erebidae
Katha
Katha magnata

description: Katha magnata (Matsumura)
Lithosia magnata Matsumura, 1927, J. Coll. Agri., Hokkaido Imp. Univ., 19(1): 63 Lithosia chekiangica elisabethae Roesler, 1967, Z. Wien. Ent. Ges., 52: 69.
TL: Formosa (Baibara, Horisha) [Taiwan]
Distribution: Formosa [Taiwan] (Dubatolov et al. 2012).
description: Published as part of Joshi, Rahul, Singh, Navneet & Singh, Jagbir, 2018, Description of a new Katha species from India, with a key to the Oriental species (Lepidoptera, Erebidae, Arctiinae), pp. 435-442 in Zootaxa 4407 (3) on page 439, DOI: 10.11646/zootaxa.4407.3.10, http://zenodo.org/record/1216526
Excitations of a two-dimensional supersolid
Creators: name: Poli, Elena
name: Baillie, Danny
name: Ferlaino, Francesca
name: Blakie, P. Blair
Publisher: name: arXiv
Year: 2024
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: FOS: Physical sciences

description: We present a theoretical study of the excitations of the two-dimensional supersolid state of a Bose-Einstein condensate with either dipole-dipole interactions or soft-core interactions. This supersolid state has three gapless excitation branches arising from the spontaneously broken continuous symmetries. Two of these branches are related to longitudinal sound waves, similar to those in one-dimensional supersolids. The third branch is a transverse wave arising from the non-zero shear modulus of the two-dimensional crystal. We present the results of numerical calculations for the excitations and dynamic structure factor characterising the density fluctuations, and study their behavior across the discontinuous superfluid to supersolid transition. We show that the speeds of sound are described by a hydrodynamic theory that incorporates generalized elastic parameters, including the shear modulus. Furthermore, we establish that dipolar and soft-core supersolids manifest distinct characteristics, falling into the bulk incompressible and rigid lattice limits, respectively.
description: 9 pages, 6 figures
Vicia faba Linnaeus 1753
Creators: name: Jarvis, Charlie
Publisher: name: Linnaean Society of London in association with the Natural History Museum
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Fabales
Fabaceae
Vicia
Vicia faba

description: Vicia faba Linnaeus, Species Plantarum 2: 737. 1753.
“Habitat– - –” RCN: 5423.
Lectotype (Westphal, Pulses Ethiopia, Taxon. Agric. Signif.: 205. 1974): Herb. Linn. No. 906.34 (LINN).
Current name: Vicia faba L. (Fabaceae: Faboideae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part V), pp. 911-926 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 922, DOI: 10.5281/zenodo.291971
Katha suffusa Leech 2018, comb. nov.
Creators: name: Joshi, Rahul
name: Singh, Navneet
name: Singh, Jagbir
Publisher: name: Zenodo
Year: 2018
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Erebidae
Katha
Katha suffusa

description: Katha suffusa Leech, comb. nov.
Lithosia suffusa Leech, 1899, Trans. Ent. Soc. Lond., 1899 (1): 183 Lithosia chekiangica Daniel, 1954, Bonn. Zool. Beitr., 5(1–2): 95
TL: Ta–Chien–lu (China)
Distribution: West China (Inoue 1988)
description: Published as part of Joshi, Rahul, Singh, Navneet & Singh, Jagbir, 2018, Description of a new Katha species from India, with a key to the Oriental species (Lepidoptera, Erebidae, Arctiinae), pp. 435-442 in Zootaxa 4407 (3) on pages 439-440, DOI: 10.11646/zootaxa.4407.3.10, http://zenodo.org/record/1216526
Direct prediction of saturated neoclassical tearing modes in slab using an equilibrium approach
Creators: name: Balkovic, Erol
name: Loizu, Joaquim
name: Graves, Jonathan P.
name: Huang, Yi-Min
name: Smiet, Christopher B.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Plasma Physics (physics.plasm-ph)
subject: FOS: Physical sciences

description: We demonstrate for the first time that the nonlinear saturation of neoclassical tearing modes (NTMs) can be found directly using a variational principle based on Taylor relaxation, without needing to simulate the intermediate, resistivity-dependent dynamics. As in previous investigations of classical tearing mode saturation (Loizu et al. 2020; Loizu & Bonfiglio 2023), we make use of SPEC (Hudson et al. 2012), an equilibrium solver based on the variational principle of the Multi-Region relaxed MHD, featuring stepped pressure profiles and arbitrary magnetic topology. We work in slab geometry and employ a simple bootstrap current model $J_\textrm{bs} = C \nabla p$ to study the bootstrap-driven tearing modes, scanning over the asymptotic matching parameter $Δ'$ and the bootstrap current strength. Saturated island widths produced by SPEC agree well with the predictions of an initial value resistive MHD code (Huang & Bhattacharjee 2016) while being orders of magnitude faster to calculate. Additionally, we observe good agreement with a simple analytical Modified Rutherford Equation, without requiring any fitting coefficients. The match is obtained for both linearly unstable classical tearing modes in the presence of bootstrap current, and neoclassical tearing modes, which are linearly stable but nonlinear-unstable due to the effects of the bootstrap current
description: Submitted to PPCF