Caudata
Creators: name: Speybroeck, Jeroen
name: Beukema, Wouter
name: Crochet, Pierre-André
Publisher: name: Zenodo
Year: 2010
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Amphibia
Caudata

description: Caudata or Urodela   Different opinions exist on whether Caudata (e.g. Frost et al. 2006) or Urodela (e.g. Dubois 2004) should be used to refer to the the order of salamanders and newts.   
 A recent paper on the Salamandridae family taxonomy (Dubois and Raffaëlli 2009) proposed a number of systematic changes, many of which above and below the species level. Concerning species of European newts and salamanders, the proposed changes include treating six taxa as new species: Lissotriton graecus, L. meridionalis, L. maltzani, Salamandra aurorae, S. almanzoris and S. longirostris.   
 Dubois and Raffaëlli (2009) elevated L. v. graecus and L. v. meridionalis to species level, based on the results of Babik et al. (2005). They interpret these results as suggesting that if L. montandoni (Carpathian Newt) is recognised as a distinct species, Lissotriton vulgaris (Smooth Newt) as traditionally understood is paraphyletic. In fact, this seems to be a misinterpretation of Babik et al. ’s (2005) results - the latter authors convincingly argue that the paraphyly of the mitochondrial haplotypes of vulgaris is caused by repeated introgression of vulgaris mitochondrial lineages into montandoni, resulting in the replacement of the original montandoni mtDNA by vulgaris mtDNA. Conclusively, L. vulgaris mtDNA is paraphyletic in relation to L. montandoni mtDNA, but this is probably not true for the species themselves.   
 Indeed, even while both graecus and meridionalis (in addition to several other Anatolian and Caucasian subspecies) are distinct in molecular (mtDNA: Babik et al. 2005, nuclear DNA: Kalezić 1983; Kalezić and Tucić 1984) and morphological (Schmidtler and Franzen 2004) features (however, mainly based on male secondary sexual characters - Raxworthy 1990, but see Pellarini and Lapini 2000), Babik et al. (2005) revealed high levels of mtDNA introgression in contact zones between several subspecies/lineages, including both graecus and meridionalis, and a general lack of concordance between subspecies limits, defined on the basis of mtDNA and morphological data. Although L. v. meridionalis is represented by a single clade in peninsular Italy (albeit represented by only two samples), Istrian and Slovenian populations which have been attributed to this taxon based on morphology and allozymes (Schmidtler and Franzen 2004), seem to belong to L. v. vulgaris according to mtDNA data (Babik et al. 2005). Concerning L. v. graecus, the current northern parts of its distributional range seems to be introgressed by populations related to L. v. vulgaris, while Corfu represents a relictual lineage and sampling is lacking from central parts of southern Greece. Thus, despite a high level of mtDNA divergence and evidence of ancient diversification events between some subspecies in L. vulgaris (Babik et al. 2005), the available data do not allow drawing definite conclusions on these taxa. We therefore refrain from accepting graecus and meridionalis as full species until additional data on contact zones and wider geographical sampling of these taxa are presented.   
 The Algarve clade of Bosca’s Newt (Lissotriton boscai) found by Martínez-Solano et al. (2006) might deserve species rank, the name maltzani apparently being available for it (Montori et al. 2005), as already mentioned by Speybroeck and Crochet (2007). However, more sampling in (possible) transition zones and the study of nuclear genes and morphology seems required, prior to any new arrangement. The distinct clade found by Herrero (1991) also deserves further attention. Quoting Martínez-Solano et al. (2006): “(…) new data from independent sources are needed to clarify the taxonomic status of these two divergent lineages, and morphological and molecular studies including data on variation in nuclear markers will be particularly helpful in this respect. Variation in populations within L. boscai has been already studied from morphological and genetic perspectives, but previous studies have failed to include representatives of all the clades identified in our study (…).”. As no additional evidence seems to have been presented in the mean time, we agree with this. As such, we consider Dubois and Raffaëlli’s (2009) proposal to accept Lissotriton maltzani to be premature.   
 Elevating Salamandra atra aurorae to species rank, as the same authors do, seems quite clearly unwarranted, as —with little or no doubt— their acceptance renders the Alpine Salamander (S. atra) paraphyletic. Indeed, papers stating aurorae to be a sister group to all other atra populations (Steinfartz et al. 2000; Bonato and Steinfartz, 2005) have been contradicted by those including samples from northern Dinaric populations from Slovenia and Croatia (Ribéron et al. 2001, 2004). Dubois and Raffaëlli (2009) also accepted the subspecies S. a. prenjensis, restricting it to Bosnia and Herzegovina, Serbia, Montenegro and Albania, “because it is isolated from the other populations in the non-Dinaric Alps and shows morphological differences from them, being smaller and slightly different in coloration”. Klewen (1988) and Guex and Grossenbacher (2003), however, consider these differences to fall within the intraspecific variation of S. atra and do not accept prenjensis as a separate taxon.   
 Dubois and Raffaëlli (2009) also consider Salamandra salamandra almanzoris to deserve species rank, rather than its conventional treatment as a subspecies of the Fire Salamander (S. salamandra). However, García-París et al. (2003) and Iraola and García-París (2004) suggest that almanzoris belongs to a main clade with S. s. morenica and S. s. crespoi, making it impossible to treat the former as a species without consequences for the status of the other taxa. Martínez-Solano et al. (2005) showed that almanzoris is more widespread than traditionally considered, being distributed over most of the mountains of the Spanish Sistema Central. They found that the genetic divergence in allozymes between almanzoris and bejarae is typical for intraspecific levels in amphibians and that allozymes, morphology and mtDNA provide contrasting results on the delimitation of those taxa, evidencing introgression in contact zones. Thus, we do not follow the proposal to elevate this taxon to species rank, which is clearly not the most divergent among the Iberian Salamandra lineages.   
 The more difficult case of Salamandra (salamandra) longirostris seems primarily to depend on where to draw the line based on mtDNA sequence divergence between allopatric taxa. Steinfartz et al. (2000) note 6,3% mtDNA divergence (control region sequences) between this taxon, S. s. morenica and S. s. crespoi versus all other subspecies of S. salamandra, but group longirostris together with morenica and crespoi. Corresponding divergence times were tentatively estimated at approximately 2–4 mya. Using a different mitochondrial gene (cytochrome b), García-París et al. (1998) found a basal position of longirostris in relation to all other Iberian lineages (including morenica and crespoi) and a 5.1%–5.7% sequence divergence between longirostris and the main clade. According to these authors, S. (s.) longirostris became isolated from other Salamandra taxa either by the Betic Strait in the Miocene, or during the Pliocene formation of the Guadalquivir river valley. Under this second (favoured) hypothesis, longirostris would have split 2.5–5.3 mya. In yet another study, Escoriza et al. (2006) place longirostris close to S. inframaculata orientalis, but admit that this sister taxon relationship may very well be an artefact. Additionally, we note that Dubois and Raffaëlli (2009) claim a close relationship between longirostris and S. algira, whereas this is in clear contrast to the findings of other authors (e.g. Steinfartz et al. 2000; Donaire Barroso and Bogaerts 2003). Donaire Barroso et al. (2009) provided some additional data on the distinctiveness of the longirostris colour pattern. Although longirostris may well deserve full species rank, conflicting phylogenetic trees prompt us to maintain it as a subspecies until conclusive evidence is provided.   
 Following Schmidtler (2004), Speybroeck and Crochet (2007) and the online database “Amphibian Species of the World 5.3” have accepted that Triturus Rafinesque 1815 is a nomen nudum and thus nomenclaturally unavailable. However, this was clearly a mistake: as demonstrated by Dubois and Raffaëlli (2009), Triturus Rafinesque 1815 was a neonym (nomen novum) for Triton Laurenti 1768 and thus an available nomen. This means that authorship for this taxon remains 1815 and not 1820.   
 We note that the rejection of the works of de la Cepède (International Commission on Zoological Nomenclature 2005) lead to attribution of some names to Bonnaterre, 1789. This was already adopted by Speybroeck and Crochet (2007) for e.g. the Southern Spectacled Salamander (Salamandrina terdigitata). As pointed out by Dubois and Raffaëlli (2009), this also holds true for Salamandra salamandra terrestris. Referral to the latter taxon by means of junior synonyms like europaea Bedriaga, 1883 seems therefore unwarranted.   
 Finally, we are reluctant to accept Dubois and Raffaëlli’s (2009) new subspecific arrangement of the Alpine Newt (Ichthyosaura alpestris), because we believe that mtDNA data alone are not sufficient for revising intraspecific systematics, and any proposal for changes seems currently premature. The same applies to Sotiropoulos et al. (2007): we are not (yet) convinced that the subspecies inexpectata should be abandoned. As a side comment, both Sotiropoulos et al. (2007 - mtDNA) and Canestrelli et al. (2006a - allozymes and mtDNA) uncovered a level of genetic divergence between peninsular Italian and continental European Ichthyosaura which is more typical of interspecific divergence than intraspecific variation in Caudata. Lack of clear concordance between mtDNA clades and morphology, and absence of supporting evidence for the most basal lineages in Sotiropoulos et al. (2007) prevent us from adopting any systematic changes here, but we anticipate future splits when additional data will become available.   
 Two species in the genus Salamandrina -the Southern Spectacled Salamander S. terdigitata and the Northern Spectacled Salamander S. perspicillata - have been recognised in recent years, based on both mtDNA and nuclear markers (Mattoccia et al. 2005; Canestrelli et al. 2006b), apparently separated by the Volturno river. However, only a restricted number of samples was used and morphological data was lacking. Romano et al. (2009) presented evidence of morphological divergence between the species, based on body size and dorsal colouration differences. New localities and additional samples revealed a contact zone south of the Volturno River in northern Campania, where both species occur syntopically in several locations, but they remain distinct in terms of (at least) mtDNA.   
 Arntzen et al. (2007) found a high level of allozyme differentiation between Triturus carnifex carnifex (Italian Crested Newt) and T. c. macedonicus (Macedonian Crested Newt) (Nei’s genetic distance = 0.19, similar to the divergence between T. marmoratus and T. pygmaeus) suggesting a long (> 5 million years) separate evolution. As a consequence, they elevated the latter to species rank as Triturus macedonicus. Even more recently, Espregueira Themudo et al. (2009) elevated the European Southern Crested Newt to species rank as Triturus arntzeni (Arntzen’s Crested Newt). Forthcoming papers will have to delimit the geographical range of arntzeni and karelinii, as different sources of information give contrasting results (Olgun et al. in prep.; Wielstra et al. in prep.). As a consequence, it is unclear at present whether karelinii s.s. occurs in the area considered in our paper.   
 Carretero et al. (2009) issued an updated ‘lista patrón’ of the Spanish herpetofauna, as first released by Montori et al. (2005). In conflict with the rules of the International Code of Zoological Nomenclature, they reject Ichthyosaura (containing the species alpestris) on grounds of confusion with the prehistorical taxon Ichthyosaurus. As stated in the introduction, we firmly believe that the Code should be followed consistently, thus we advocate the use of this name over e.g. Mesotriton.   
 Frost (2009) attributes the name Ichthyosaura to Latreille in Sonnini de Manoncourt and Latreille, 1801. Dubois (2008) advocated attribution of nomina to the author name(s) as cited in the original publication. In this case, the book is authored by C.S. Sonnini and P.A. Latreille. As pointed out by Dubois and Raffaëlli (2009), the relevant part of this 4-volume work contains no specification on whether it was written by either author or both. In this part, singular (‘je’ = I) and plural (‘nous’ = we) are mixed up, while the part dealing with Proteus tritonius is written in plural. As Ichthyosaura was based on the latter taxon, we attribute this name to Sonnini and Latreille, 1801, as does Schmidtler (2009). The latter also pointed out that the name is of female gender, therefore requiring accordingly inflected subspecies names (e.g. apuana, inexpectata, serdara, …), regardless of their validity.   
 As discussed in Speybroeck and Crochet (2007) and in contrast to a number of recent papers (e.g. Carranza et al. 2008a; van der Meijden et al. 2009), we extend the use of the genus name Speleomantes for the European cave salamanders. Nascetti et al. (1996) found a huge genetic distance between the Californian Hydromantes shastae and the Sardinian Speleomantes genei (Gené’s Cave Salamander; D Nei 3.38) and S. imperialis (Scented Cave Salamander; D Nei 3.92), and all available studies resolve the European species as a monophyletic clade. Wake et al. (2005) proposed the genus name Atylodes for Speleomantes genei, which can be used at genus or subgenus level (Crochet 2007). Vieites et al. (2007) proposed to use Atylodes, Speleomantes and Hydromantes at the genus level. However, van der Meijden et al. (2009) could not find a strongly supported (basal) position for genei. Consequently, using Atylodes as a valid taxon may render Speleomantes paraphyletic. We thus refrain from using this name at any level.   
 Carranza et al. (2008) elevated the Sette Fratelli Cave Salamander from southeastern Sardinia to species rank as Speleomantes sarrabusensis. The still unnamed “subspecies B” of Speleomantes genei was shown to be more widespread (van der Meijden et al. 2009) than previously assumed (Lanza et al. 2005). Van der Meijden et al. (2009) confirmed that the genetic distance between the A and B genei taxa is of a magnitude that could warrant treatment of both taxa as separate species. Furthermore, their easternmost sample of Speleomantes imperialis (Lago Omodeo area) appeared quite distinct from their other imperialis samples.   
 Taxonomic consequences, however, remain premature, pending more range-wide sampling, including samples of the central parts of the species’ range. On the other hand, the results of van der Meijden et al. (2009) confirmed that the current systematics of the italicus - ambrosii group (Italian and Ambrosi’s Cave Salamander) is probably inadequate: in their phylogenetic tree, specimens of S. ambrosii ambrosii are more closely related to specimens of S. italicus than to specimens of S. ambrosii bianchii. Based on extensive introgression in contact zones (Lanza et al. 2005), it might be better to treat ambrosii as a subspecies of italicus. However, we refrain from proposing any formal change for the time being.
description: Published as part of Speybroeck, Jeroen, Beukema, Wouter & Crochet, Pierre-André, 2010, A tentative species list of the European herpetofauna (Amphibia and Reptilia) — an update, pp. 1-27 in Zootaxa 2492 on pages 3-6, DOI: 10.5281/zenodo.195659