cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
A Lower Bound on sin 2βfrom Minimal Flavour Violation
Creators: name: Buras, Andrzej J.
name: Buras, Robert
Publisher: name: arXiv
Year: 2000
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We point out that there exists an absolute lower bound on sin 2βin all models with minimal flavour violation (MFV), that do not have any new operators beyond those present in the Standard Model and in which all flavour changing transitions are governed by the CKM matrix with no new phases beyond the KM phase. This bound depends only on V_{cb}, V_{ub} and the hadronic parameters \hat B_K, F_{B_d}\sqrt{\hat B_d} and ξrelevant for the CP-violating parameter \varepsilon and the B^0_{d,s}-\bar B^0_{d,s} mixings. Performing a simple scanning over the present ranges of these parameters we find sin 2β\ge 0.34. We illustrate how this bound could become stronger when our knowledge of the parameters in question improves and when the upper bound on the B^0_{s}-\bar B^0_{s} mixing ((ΔM)_s) will be experimentally known. Provided the future accurate measurements of sin 2βthrough the CP asymmetry in B_d^0(\bar B_d^0)\to ψK_S will confirm the low values recently reported by BaBar and Belle, there is a likely possibility that this class of models will be excluded. This would firmly imply the necessity of new CP-violating phases and/or new effective operators in the weak effective Hamiltonians for K^0-\bar K^0 and B^0_{d,s}-\bar B^0_{d,s} mixings. We also point out that within the MFV models there exists also an absolute lower bound on the angle γ. We find \sinγ\ge 0.24. This lower bound could become stronger in the future.
description: 14 pp, 2 figures, TUM-HEP/00, MPI-TH/2000-30
Eclipsing Binaries in the OGLE Variable Star Catalog.III. Long-Period Contact Systems
Creators: name: Rucinski, Slavek M.
Publisher: name: arXiv
Year: 1997
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: A sample of contact binaries discovered by the OGLE project in Baade's Window, with orbital periods longer than one day and with available color and light-curve data, has been analyzed. It consists of only 32 systems, in contrast to 388 WUMa-type systems with shorter periods which were analyzed before. Most systems are very distant and are probably located close to or in the galactic Bulge. Two groups of contact binaries are seen in the sample: (1) a continuation of the WUMa-type sequence, extending up to the orbital periods of 1.3 - 1.5 day, but rather sharply ending in this period range; (2) an inhomogeneous group of rare systems with long periods up to 26 days, all with red colors and relatively shallow eclipses. While the systems of the first group share most of the characteristics of the typical WUMa-type systems (except that they are on the average brighter and more distant, hence more reddened), the long-period systems do not seem to form an early-type extension of contact binaries, but may consist of a mixture of late-type objects, including tidally distorted red giants with invisible companions.
description: 24 pages including 10 figures (inserted with psfig) and one table; submitted to AJ
Archaeological Recovery of Skeletal Remains for the U.S. Bureau of Reclamation Santa Cruz River Bank Stabilization Project, San Xavier District, Tohono O'odham Nation, Tucson, Arizona
Creators: name: C. Scott Crownover
Publisher: name: Archaeological Consulting Services, Ltd.
Year: 1998
Subjects: 04998 (Fips Code)
Santa Cruz River
San Xavier District
Tucson
AZ BB:13:14(ASM)
AZ BB:13:554(ASM)
Funerary and Burial Structures or Features
Bedrock Grinding Feature
Artifact Scatter
Isolated Artifact
Midden
Ceramic
Fauna
Fire Cracked Rock
Ground Stone
Human Remains
Data Recovery / Excavation

description: In the course of the Santa Cruz River Bank Stabilization Project, Bureau of Reclamation (Reclamation) and San Xavier District personnel identified human remains exposed in the Santa Cruz river bank which would be impacted by the construction. At the request of Reclamation, Archaeological Consulting Services, Ltd (ACS), recovered the remains in a manner consistent with the wishes of the local community, as well as addressing scientific standards. Four inhumations, one cremation, a single unidentified bone fragment, and one exposure consisting of two artifacts were excavated. All remains were transferred to the San Xavier District monitors at the end of each work day for reburial.
Continuous Tensor Network States for Quantum Fields
Creators: name: Tilloy, Antoine
name: Cirac, J. Ignacio
Publisher: name: arXiv
Year: 2018
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: High Energy Physics - Lattice (hep-lat)
subject: High Energy Physics - Theory (hep-th)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We introduce a new class of states for bosonic quantum fields which extend tensor network states to the continuum and generalize continuous matrix product states (cMPS) to spatial dimensions $d\geq 2$. By construction, they are Euclidean invariant, and are genuine continuum limits of discrete tensor network states. Admitting both a functional integral and an operator representation, they share the important properties of their discrete counterparts: expressiveness, invariance under gauge transformations, simple rescaling flow, and compact expressions for the $N$-point functions of local observables. While we discuss mostly the continuous tensor network states extending Projected Entangled Pair States (PEPS), we propose a generalization bearing similarities with the continuum Multi-scale Entanglement Renormalization Ansatz (cMERA).
description: 16 pages, 5 figures, close to published version
Deep-Inelastic Onium Scattering
Creators: name: Navelet, H.
name: Peschanski, R.
name: Royon, Ch.
Publisher: name: arXiv
Year: 1995
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Using the colour dipole approach of the QCD perturbative (BFKL) Pomeron exchange in onium-onium scattering, we compute the cross section for small but hierarchically different onium sizes. A specific term dependent on the size-ratio is generated. In deep inelastic onium scattering it appears as a scaling violation contribution to the quark structure function near the BFKL singularity. We find that the extension of the formalism for deep inelastic onium scattering to the proton structure function provides a remarkably good 3-parameter fit to HERA data at small x with a simple physical interpretation in terms of the dipole formulation.
description: 10 pages, 2 Postscript figures
Additional file 6 of Aldehyde dehydrogenase 2 rs671 polymorphism and multiple diseases: protocol for a quantitative umbrella review of meta-analyses
Creators: name: He, Zhengting
name: Guo, Qi
name: Ling, Yikai
name: Hong, Chuan
name: Liu, Yuqing
name: Jin, Xurui
name: Thanaporn, Porama
name: Zhao, Duan
name: Wang, Leiting
name: Liu, Liang
name: Yan, Lijing L.
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Chemical Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 6. Munder’s method [1] for statistically managing overlap between meta-analyses.
Supergravity spectrum on AdS_2 x S^2
Creators: name: Michelson, Jeremy
name: Spradlin, Marcus
Publisher: name: arXiv
Year: 1999
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The Kaluza-Klein spectrum of N=2, D=4 supergravity compactified on AdS_2 x S^2 is found and shown to consist of two infinite towers of SU(1,1|2) representations. In addition to `pure gauge' modes living on the boundary of AdS which are familiar from higher dimensional cases, in two dimensions there are modes (e.g. massive gravitons) which enjoy no gauge symmetry yet nevertheless have no on-shell degrees of freedom in the bulk. We discuss these two-dimensional subtleties in detail.
description: 20 pages, 1 figure. Typos corrected, references updated
Letter from Margaret Jones to William Elliot Griffis, November 5, 1912
Creators: name: Jones, Margaret
Publisher: name: No Publisher Supplied
Year: 1912

description: Provides names of Korean boys and girls (presumably at Griffis' request). Mentions that a girl, Margaret McIllwaine, is the daughter of W.B. McIllwaine, saying that Griffis may know as a missionary in Japan.
A Dark Matter Hurricane: Measuring the S1 Stream with Dark Matter Detectors
Creators: name: O'Hare, Ciaran A. J.
name: McCabe, Christopher
name: Evans, N. Wyn
name: Myeong, GyuChul
name: Belokurov, Vasily
Publisher: name: arXiv
Year: 2018
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: High Energy Physics - Experiment (hep-ex)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The recently discovered S1 stream passes through the Solar neighbourhood on a low inclination, counter-rotating orbit. The progenitor of S1 is a dwarf galaxy with a total mass comparable to the present-day Fornax dwarf spheroidal, so the stream is expected to have a significant DM component. We compute the effects of the S1 stream on WIMP and axion detectors as a function of the density of its unmeasured dark component. In WIMP detectors the S1 stream supplies more high energy nuclear recoils so will marginally improve DM detection prospects. We find that even if S1 comprises less than 10% of the local density, multi-ton xenon WIMP detectors can distinguish the S1 stream from the bulk halo in the relatively narrow mass range between 5 and 25 GeV. In directional WIMP detectors such as CYGNUS, S1 increases DM detection prospects more substantially since it enhances the anisotropy of the WIMP signal. Finally, we show that axion haloscopes possess by far the greatest potential sensitivity to the S1 stream. Once the axion mass has been discovered, the distinctive velocity distribution of S1 can easily be extracted from the axion power spectrum.
description: 21 pages, 11 figures
Phase transition(s) in finite density QCD
Creators: name: Aloisio, R.
name: Azcoiti, V.
name: Di Carlo, G.
name: Galante, A.
name: Grillo, A. F.
Publisher: name: arXiv
Year: 1998
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: The Grand Canonical formalism is generally used in numerical simulations of finite density QCD since it allows free mobility in the chemical potential $μ$. We show that special care has to be used in extracting numerical results to avoid dramatic rounding effects and spurious transition signals. If we analyze data correctly, with reasonable statistics, no signal of first order phase transition is present and results using the Glasgow prescription are practically coincident with the ones obtained using the modulus of the fermionic determinant.
description: 6 pages, 5 ps figs. To appear in Proceedings of "QCD at Finite Baryon Density" workshop, Bielefeld, 27-30 April 1998
Additional file 4 of Organellar genome comparisons of Sargassum polycystum and S. plagiophyllum (Fucales, Phaeophyceae) with other Sargassum species
Creators: name: Zhang, Shuangshuang
name: Liang, Yanshuo
name: Zhang, Jie
name: Draisma, Stefano G. A.
name: Duan, Delin
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 4: Table S4. The dN/dS ratio, dN and dS values of 114 chloroplast genes from 7 brown algae.
7-Connected Graphs are 4-Ordered
Creators: name: McCarty, Rose
name: Wang, Yan
name: Yu, Xingxing
Publisher: name: arXiv
Year: 2018
Subjects: subject: Combinatorics (math.CO)
subject: FOS: Mathematics
subject: 05C38, 05C40 (Primary)

description: A graph $G$ is $k$-ordered if for any distinct vertices $v_1, v_2, \ldots, v_k \in V(G)$, it has a cycle through $v_1, v_2, \ldots, v_k$ in order. Let $f(k)$ denote the minimum integer so that every $f(k)$-connected graph is $k$-ordered. The first non-trivial case of determining $f(k)$ is when $k=4$, where the previously best known bounds are $7 \leq f(4) \leq 40$. We prove that in fact $f(4)=7$.
description: 21 pages, 1 figure. Revised version
The impact of training and professional collaboration on the interobserver variation of lung cancer delineations: a multi-institutional study
Creators: name: Mercieca, Susan
name: Belderbos, José S. A.
name: Baardwijk, Angela Van
name: Delorme, Stefan
name: Herk, Marcel Van
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer

description: Background: To assess the impact of training and interprofessional collaboration on the interobserver variation in the delineation of the lung gross tumor volume (GTVp) and lymph node (GTVln). Material and methods: Eight target volume delineations courses were organized between 2008 and 2013. Specialists and trainees in radiation oncology were asked to delineate the GTVp and GTVln on four representative CT images of a patient diagnosed with lung cancer individually prior each course (baseline), together as group (interprofessional collaboration) and post-training. The mean delineated volume and local standard deviation (local SD) between the contours for each course group were calculated and compared with the expert delineations. Results: A total 410 delineations were evaluated. The average local SD was lowest for the interprofessional collaboration (GTVp = 0.194 cm, GTVln = 0.371 cm) followed by the post-training (GTVp = 0.244 cm, GTVln = 0.607 cm) and baseline delineations (GTVp = 0.274 cm, GTVln: 0.718 cm). The mean delineated volume was smallest for the interprofessional (GTVp = 4.93 cm3, GTVln = 4.34 cm3) followed by the post-training (GTVp = 5.68 cm3, GTVln = 5.47 cm3) and baseline delineations (GTVp = 6.65 cm3, GTVln = 6.93 cm3). All delineations were larger than the expert for both GTVp and GTVln (p Conclusion: Our findings indicate that image interpretational differences can lead to large interobserver variation particularly when delineating the GTVln. Interprofessional collaboration was found to have the greatest impact on reducing interobserver variation in the delineation of the GTVln. This highlights the need to develop a clinical workflow so as to ensure that difficult cases are reviewed routinely by a second radiation oncologist or radiologist so as to minimize the risk of geographical tumor miss and unnecessary irradiation to normal tissue.
title: Intelligent System Applications Based on Genetic Algorithms
Creators: name: Pehlivanoglu, Yasin Volkan
Publisher: name: Old Dominion University
publisherIdentifier: https://ror.org/04zjtrb98
publisherIdentifierScheme: ROR
Year: 2006

description: As a stochastic search method, evolutionary algorithm (EA) is an emergent optimization algorithm mimicking the natural evolution, where a "biological population" evolves over generations to adapt to an environment by selection, recombination, and mutation. When EA is applied to optimization problems, fitness, individual, and genes usually correspond to an objective function value, a design candidate, and design variables, respectively.

One of the key features of EA is that they search from multiple points in design space, instead of moving from a single point as in gradient-based methods. Furthermore, EA works on function evaluations alone and does not require derivatives or gradients of the objective function. These features lead to the advantages such as robustness, suitability to parallel computing, and simplicity in coupling analysis codes for fitness evaluation. Owing to these advantages, EA has become increasingly popular for a broad class of design problems.

On the other hand, the main disadvantage of EA is the substantial lack of computational efficiency due to the need for a large number of objective function evaluations, and hence the need to repeatedly solve the analysis equations. However, there are ways to improve the performance of EA. Among these efficiency improvement methods are multi-processing, improved genetic operators, and hybridization of EA with other intelligent system methods, such as, artificial intelligence or fuzzy computing.
Phanera pottingeri Thoth., Bull. Bot. Soc. Beng.
Creators: name: Mackinder, Barbara A.
name: Clark, Ruth
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Fabales
Fabaceae
Phanera
Phanera pottingeri

description: Phanera pottingeri (Prain) Thoth., Bull. Bot. Soc. Beng. 19: 133. 1965.
Bauhinia pottingeri Prain, J. As. Soc. Beng. 67 (2): 289. 1897.
DISTRIBUTION. Endemic to Myanmar.
description: Published as part of Mackinder, Barbara A. & Clark, Ruth, 2014, A synopsis of the Asian and Australasian genus Phanera Lour. (Cercideae: Caesalpinioideae: Leguminosae) including 19 new combinations, pp. 49-68 in Phytotaxa 166 (1) on page 61, DOI: 10.11646/phytotaxa.166.1.3, http://zenodo.org/record/5138206
The Semispin Groups in String Theory
Creators: name: McInnes, Brett
Publisher: name: arXiv
Year: 1999
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: In discussions of the T-duality between the two heterotic string theories, the duality is actually implemented through the "common" SO(16) x SO(16) subgroup of "SO(32)" and E_8 x E_8. In fact, however, a global investigation shows that no such "common" subgroup exists. This paper is a survey of the relevant global properties of Spin(32)/Z_2 and its subgroups.
description: 23 pages
Additional file 5 of Organellar genome comparisons of Sargassum polycystum and S. plagiophyllum (Fucales, Phaeophyceae) with other Sargassum species
Creators: name: Zhang, Shuangshuang
name: Liang, Yanshuo
name: Zhang, Jie
name: Draisma, Stefano G. A.
name: Duan, Delin
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 5: Fig. S1. The dN/dS of mitochondrial genes (n = 35) estimated from the Sargassum species. The ratio of non-synonymous and synonymous sequence divergence to the 7 species of brown algae.
Deep learning for comprehensive forecasting of Alzheimer's Disease progression
Creators: name: Fisher, Charles K.
name: Smith, Aaron M.
name: Walsh, Jonathan R.
name: Diseases, the Coalition Against Major
Publisher: name: arXiv
Year: 2018
Subjects: subject: Machine Learning (cs.LG)
subject: Quantitative Methods (q-bio.QM)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences
subject: FOS: Biological sciences

description: Most approaches to machine learning from electronic health data can only predict a single endpoint. Here, we present an alternative that uses unsupervised deep learning to simulate detailed patient trajectories. We use data comprising 18-month trajectories of 44 clinical variables from 1908 patients with Mild Cognitive Impairment or Alzheimer's Disease to train a model for personalized forecasting of disease progression. We simulate synthetic patient data including the evolution of each sub-component of cognitive exams, laboratory tests, and their associations with baseline clinical characteristics, generating both predictions and their confidence intervals. Our unsupervised model predicts changes in total ADAS-Cog scores with the same accuracy as specifically trained supervised models and identifies sub-components associated with word recall as predictive of progression. The ability to simultaneously simulate dozens of patient characteristics is a crucial step towards personalized medicine for Alzheimer's Disease.
Heavy Quark Production In Hadronic Collisions
Creators: name: Mangano, Michelangelo L.
Publisher: name: arXiv
Year: 1995
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We review the physics of heavy quark and quarkonium production in high energy hadronic collisions. We discuss the status of the theoretical calculations and compare the current results with the most recent measurements from the Tevatron collider experiments.
description: 12 pages, latex, 7 postscript figures, compressed and submitted separately. To appear in the Proceedings of the 6th International Symposium on Heavy Flavour Physics, Pisa, Italy, June 6-10, 1995
Testing the (0,2) mirror map
Creators: name: Bertolini, Marco
Publisher: name: arXiv
Year: 2018
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We test a proposed mirror map at the level of correlators for linear models describing the (0,2) moduli space of superconformal field theories with a (2,2) locus associated to Calabi-Yau hypersurfaces in toric varieties. We verify in non-trivial examples that the correlators are exchanged by the mirror map and we derive a correspondence between the observables of the A/2- and B/2-twisted theories. We also comment on the global structure of the (0,2) moduli space and present a simple non-renormalization argument for a large class of B/2 model subfamilies.
description: 32 pages
Can a flavour-conserving treatment improve things ?
Creators: name: Mendel, E.
Publisher: name: arXiv
Year: 1998
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: In this work I would like to present some ideas on how to improve on the gauge sector in our lattice simulations at finite baryon density. The long standing problem, that we obtain an onset in thermodynamic quantities at a much smaller chemical potential than expected, could be related to an unphysical proliferation of flavours due to hard gluons close to the Brillouin edges. These hard gluons produce flavour non-conserving vertices to the fermion sector. They also produce excessive number of small instantons due to lattice dislocations. Both unphysical effects could increase the propagation in (di)-quarks to give the early onset in $μ$. Thus we will present here a modified action that avoids large fields close to the lattice cutoff. Some of these ideas have been tested for SU(2) and are being implemented for SU(3).
description: Talk presented at the Intl. Workshop on QCD at Finite Baryon Density in Bielefeld, April 98. 5 pp in Latex, uses espcrc1.sty
The spectrum of SDHD mutations in Russian patients with head and neck paraganglioma
Creators: name: Shulskaya, Marina V.
name: Shadrina, Maria I.
name: Bakilina, Natalia A.
name: Zolotova, Svetlana V.
name: Slominsky, Petr A.
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Space Science
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 60506 Virology

description: Aim of the study: It was found that the mutations in the SDHD gene, encoding one of subunits of the succinate dehydrogenase complex, lead to the development of head and neck paraganglioma (HNPGL). We analyzed this gene in 91 patients with HNPGL from Russia. Materials and methods: DNA was isolated from the whole blood. A screening for mutations was performed by Sanger sequencing. Results: We revealed three missense mutations that have been described previously: p.Pro81Leu, p.His102Arg, p.Tyr114Cys. Moreover, we identified a novel potentially pathogenic variant (p.Trp105*). Conclusions: We found that mutations in the SDHD gene were less common in Russian patients compared with the majority of European populations. It was shown that the p.His102Arg mutation is a major mutation in Russia. We confirmed the previous suggestion that a bilateral localization of the tumor and the carotid type represent a marker of the genetically determined form of HNPGL.
Photon Structure Functions Beyind the SUSY Threshold
Creators: name: Ross, D. A.
name: Weston, L. J.
Publisher: name: arXiv
Year: 2000
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We evolve virtual photon parton densities up to the SUSY threshold and higher using coupled inhomogeneous DGLAP differential equations. Reliable input parameterizations were available from the c-quark threshold. Limited $P^2$ ( target photon virtuality ) dependence is observed. The difference to the photon structure function is shown to be significant with the introduction of SUSY dependent splitting functions. A negligible difference is observed by letting the gluino mass enter after the squark mass. An effort is made to include the squark threshold effect in such a way that both the renormalization group equations are satisfied and the perturbative calculation is reproduced.
description: 18 pages (LATEX), 5 figures
Monopole Condensation and Antisymmetric Tensor Fields: Compact QED and the Wilsonian RG Flow in Yang-Mills Theories
Creators: name: Ellwanger, U.
Publisher: name: arXiv
Year: 1999
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: A field theoretic description of monopole condensation in strongly coupled gauge theories is given by actions involving antisymmetric tensors B_{μν} of rank 2. We rederive the corresponding action for 4d compact QED, summing explicitly over all possible monopole configurations. Its gauge symmetries and Ward identities are discussed. Then we consider the Wilsonian RGs for Yang-Mills theories in the presence of collective fields (again tensors B_{μν}) for the field strengths F_{μν} associated to the U(1) subgroups. We show that a ``vector-like'' Ward identity for the Wilsonian action involving B_{μν}, whose validity corresponds to monopole condensation, constitutes a fixed point of the Wilsonian RG flow.
description: 18 pages (LaTeX2e), 1 fig
Additional file 4 of E-cadherin maintains the undifferentiated state of mouse spermatogonial progenitor cells via β-catenin
Creators: name: Song, Weixiang
name: Zhang, Danchen
name: Mi, Jiaqi
name: Du, Wenfei
name: Yang, Yang
name: Chen, Rong
name: Tian, Cong
name: Zhao, Xiaodong
name: Zou, Kang
Publisher: name: figshare
Year: 2022
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Computational Biology

description: Additional file 4: Table S3. The sequences of siRNA and sgRNA used in this study.
Mining Illegal Insider Trading of Stocks: A Proactive Approach
Creators: name: Islam, Sheikh Rabiul
name: Ghafoor, Sheikh Khaled
name: Eberle, William
Publisher: name: arXiv
Year: 2018
Subjects: subject: Statistical Finance (q-fin.ST)
subject: Machine Learning (cs.LG)
subject: Machine Learning (stat.ML)
subject: FOS: Economics and business
subject: FOS: Computer and information sciences

description: Illegal insider trading of stocks is based on releasing non-public information (e.g., new product launch, quarterly financial report, acquisition or merger plan) before the information is made public. Detecting illegal insider trading is difficult due to the complex, nonlinear, and non-stationary nature of the stock market. In this work, we present an approach that detects and predicts illegal insider trading proactively from large heterogeneous sources of structured and unstructured data using a deep-learning based approach combined with discrete signal processing on the time series data. In addition, we use a tree-based approach that visualizes events and actions to aid analysts in their understanding of large amounts of unstructured data. Using existing data, we have discovered that our approach has a good success rate in detecting illegal insider trading patterns.
description: Accepted in IEEE BigData 2018
Generalization of the sci-L3 method to achieve high-throughput linear amplification for replication template strand sequencing, genome conformation capture, and the joint profiling of RNA and chromatin accessibility
Creators: name: Chovanec, Peter
name: Yin, Yi
Publisher: name: Zenodo
Year: 2024

description: Single-cell combinatorial indexing (sci-) methods have addressed major limitations of throughput and cost for many single cell modalities. With the incorporation of linear amplification and 3-level barcoding in our suite of methods called sci-L3, we further addressed the limitations of uniformity in single cell genome amplification. Here, we build on the generalizability of sci-L3 by extending it to template strand sequencing (sci-L3-Strand-seq), genome conformation capture (sci-L3-Hi-C), and the joint profiling of RNA and chromatin accessibility (sci-L3-RNA/ATAC). We demonstrate the ease of adapting sci-L3 to these new modalities by only requiring a single-step modification of the original protocol. As a proof-of-principle, we show our ability to detect sister chromatid exchanges, genome compartmentalization, and cell state specific features in thousands of single cells. We anticipate sci-L3 to be compatible with additional modalities, including DNA methylation (sci-MET) and chromatin associated factors (CUT&Tag), and ultimately enable a multi-omics readout of them.
Unprecedented High Irreversibility Line in Nontoxic Cuprate Superconductor (Cu,C)Ba2Ca3Cu4O11+delta
Creators: name: Zhang, Yue
name: Liu, Wenhao
name: Zhu, Xiyu
name: Zhao, Haonan
name: Hu, Zheng
name: He, Chengping
name: Wen, Hai-Hu
Publisher: name: arXiv
Year: 2018
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: One of the key factors limiting the high power applications for a type-II superconductor is the irreversibility line Hirr(T) which reflects the very boundary of resistive dissipation in the phase diagram of magnetic field versus temperature. In cuprate family, the Y-, Bi-, Hg- and Tl-based systems have superconducting transition temperatures exceeding the liquid nitrogen boiling temperature (~77K). However, the toxic elements Hg and Tl in the latter two systems strongly constrain the possible applications. The Bi-based (2223) system is nontoxic, but the irreversibility magnetic field is strongly suppressed in the liquid nitrogen temperature region. For this purpose, the best perspective so far is relying on the YBa2Cu3O7 (Tc~90 K) system which is nontoxic and has a relatively high irreversibility magnetic field. Here we report the study of a nontoxic superconductor (Cu,C)Ba2Ca3Cu4O11+δ with Tc = 116K. It is found that the irreversibility magnetic field is unprecedentedly high among all superconductors and it thus provides a great potential of applications in the liquid nitrogen temperature region.
description: 15 pages, 7 figures, including Supplementary Materials
Small-x Effects in W + jets Production at the Tevatron
Creators: name: Lonnblad, Leif
Publisher: name: arXiv
Year: 1995
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The jet structure in events with Drell-Yan-produced W bosons is discussed, and a new model for describing such event is presented. The model is shown to explain recent measurements of the W-jet rapidity correlation and predicts a transverse energy flow at high W rapidities (corresponding to probing small-x partons in one of the incoming protons) higher than conventional parton cascade event generators.
description: 16 pages, postscript figures included with \special macros
Additional file 2 of E-cadherin maintains the undifferentiated state of mouse spermatogonial progenitor cells via β-catenin
Creators: name: Song, Weixiang
name: Zhang, Danchen
name: Mi, Jiaqi
name: Du, Wenfei
name: Yang, Yang
name: Chen, Rong
name: Tian, Cong
name: Zhao, Xiaodong
name: Zou, Kang
Publisher: name: figshare
Year: 2022
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Computational Biology

description: Additional file 2: Table S1. Information of primers used in this study.
Glueball Masses in Relativistic Potential Model
Creators: name: Shpenik, A.
name: Fekete, Yu.
name: Kis, J.
Publisher: name: arXiv
Year: 2000
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The problem of glueball mass spectra using the relativistic Dirac equation is studied. Also the Breit-Fermi approach used to obtaining hyperfine splitting in glueballs. Our approach is based on the assumption, that the nature and the forces between two gluons are the short-range. We were to calculate the glueball masses with used screened potential.
description: 7 pages, LaTeX
Gluon-Meson Duality
Creators: name: Wetterich, Christof
Publisher: name: arXiv
Year: 1999
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The QCD-vacuum is characterized by the Higgs phenomenon for colored scalar fields. In this dual picture the gluons appear as the octet of vector mesons. Also quarks and baryons are identified. Gluon-meson and quark-baryon duality can account in a simple way for realistic masses of all low-mass hadrons and for their interactions.
description: 7 pages
Knotting fractional-order knots with the polarization state of light
Creators: name: Pisanty, Emilio
name: Machado, Gerard J.
name: Vicuña-Hernández, Verónica
name: Picón, Antonio
name: Celi, Alessio
name: Torres, Juan P.
name: Lewenstein, Maciej
Publisher: name: arXiv
Year: 2018
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: The fundamental polarization singularities of monochromatic light are normally associated with invariance under coordinated rotations: symmetry operations that rotate the spatial dependence of an electromagnetic field by an angle $θ$ and its polarization by a multiple $γθ$ of that angle. These symmetries are generated by mixed angular momenta of the form $J_γ= L + γS$ and they generally induce Möbius-strip topologies, with the coordination parameter $γ$ restricted to integer and half-integer values. In this work we construct beams of light that are invariant under coordinated rotations for arbitrary $γ$, by exploiting the higher internal symmetry of 'bicircular' superpositions of counter-rotating circularly polarized beams at different frequencies. We show that these beams have the topology of a torus knot, which reflects the subgroup generated by the torus-knot angular momentum $J_γ$, and we characterize the resulting optical polarization singularity using third-and higher-order field moment tensors, which we experimentally observe using nonlinear polarization tomography.
description: Submitted Manuscript, including a subset of the figures from the published Supplementary Information
Additional file 11: of Membrane associated collagen XIII promotes cancer metastasis and enhances anoikis resistance
Creators: name: Zhang, Hui
name: Fredericks, Tricia
name: Xiong, Gaofeng
name: Qi, Yifei
name: Rychahou, Piotr
name: Li, Jia-Da
name: Pihlajaniemi, Taina
name: Xu, Wei
name: Xu, Ren
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Physical Sciences not elsewhere classified
subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Plant Biology

description: Figure S11. Bright field and fluorescence images showing bone metastasis of GFP-labeled MDA-MB-231 cells in nude mice. Left two images showed bone metastasis of the control MAD-MB-231 cells on the hind leg after intracardiac inoculation. Right two images showed bone metastasis of Col13−/− MAD-MB-231 cells on the fore leg after intracardiac inoculation. n = 4. (PDF 7411 kb)
Relativistic Description of Exclusive Heavy-to-Light Semileptonic Decays $B\toπ(ρ)eν$
Creators: name: Faustov, R. N.
name: Galkin, V. O.
name: Mishurov, A. Yu.
Publisher: name: arXiv
Year: 1995
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The method of calculating electroweak decay matrix elements between heavy-heavy and heavy-light meson states is developed in the framework of relativistic quark model based on the quasipotential approach in quantum field theory. This method is applied for the study of exclusive semileptonic $B\toπ(ρ)$ decays. It is shown that the large value of the final $π(ρ)$ meson recoil momentum allows for the expansion in inverse powers of $b$-quark mass of the decay form factors at $q^2=0$, where $q^2$ is a momentum carried by the lepton pair. This $1/m_b$ expansion considerably simplifies the analysis of these decays and is carried out up to the second order. The $q^2$-dependence of the form factors is investigated. It is found that the $q^2$-behaviour of the axial form factor $A_1$ is different from the other form factors. It is argued that the ratios $Γ(B\toρeν)/Γ(B\toπeν)$ and $Γ_L/Γ_T$ are sensitive probes of the $A_1$ $q^2$-dependence, and thus their experimental measurement may discriminate between different approaches. We find $Γ(B\toπeν)=(3.0\pm0.6) \times|V_{ub}|^2\times10^{12}$s$^{-1}$ and $Γ(B\toρeν) =(5.4\pm 1.2)\times|V_{ub}|^2\times10^{12}$s$^{-1}$. The relation between semileptonic and rare radiative $B$-decays is discussed.
description: 20 pages, two figures included, LATEX
A Big-Data based and process-oriented decision support system for traffic management
Creators: name: Vera-Baquero, Alejandro
name: Colomo-Palacios, Ricardo
Publisher: name: arXiv
Year: 2018
Subjects: subject: Computers and Society (cs.CY)
subject: FOS: Computer and information sciences

description: Data analysis and monitoring of road networks in terms of reliability and performance are valuable but hard to achieve, especially when the analytical information has to be available to decision makers on time. The gathering and analysis of the observable facts can be used to infer knowledge about traffic congestion over time and gain insights into the roads safety. However, the continuous monitoring of live traffic information produces a vast amount of data that makes it difficult for business intelligence (BI) tools to generate metrics and key performance indicators (KPI) in nearly real-time. In order to overcome these limitations, we propose the application of a big-data based and process-centric approach that integrates with operational traffic information systems to give insights into the road network's efficiency. This paper demonstrates how the adoption of an existent process-oriented DSS solution with big-data support can be leveraged to monitor and analyse live traffic data on an acceptable response time basis.
Additional file 4: of Membrane associated collagen XIII promotes cancer metastasis and enhances anoikis resistance
Creators: name: Zhang, Hui
name: Fredericks, Tricia
name: Xiong, Gaofeng
name: Qi, Yifei
name: Rychahou, Piotr
name: Li, Jia-Da
name: Pihlajaniemi, Taina
name: Xu, Wei
name: Xu, Ren
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Cell Biology
subject: Molecular Biology
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Figure S4. The path of single cell migration in control (left) and Col13-expressing MCF-10A cells (right); nâ =â 13. (PDF 1546 kb)
Monte Carlo simulations and field transformation: the scalar case
Creators: name: Alles, B.
name: Butera, P.
name: Della Morte, M.
name: Marchesini, G.
Publisher: name: arXiv
Year: 1998
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We describe a new method in lattice field theory to compute observables at various values of the parameters lambda_i in the action S[phi,lambda_i]. Firstly one performs a single simulation of a ``reference action'' S[phi^r, lambda_i^r] with fixed lambda_i^r. Then the phi^r-configurations are transformed into those of a field phi distributed according to S[phi,lambda_i], apart from a ``remainder action'' which enters as a \break weight. In this way we measure the observables at values of lambda_i different from lambda_i^r. We study the performance of the algorithm in the case of the simplest renormalizable model, namely the phi^4 scalar theory on a four dimensional lattice and compare the method with the ``histogram'' technique of which it is a generalization.
description: Latex, 23 pgs, 8 eps-figures included
Gamma--ray emission from individual classical novae
Creators: name: Gómez-Gomar, J.
name: Hernanz, M.
name: José, J.
name: Isern, J.
Publisher: name: arXiv
Year: 1997
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Classical novae are important producers of radioactive nuclei, such as be7, n13, f18, na22 and al26. The disintegration of these nuclei produces positrons (except for be7) that through annihilation with electrons produce photons of energies 511 keV and below. Furthermore, be7 and na22 decay producing photons with energies of 478 keV and 1275 keV, respectively, well in the gamma-ray domain. Therefore, novae are potential sources of gamma-ray emission. The properties of gamma-ray spectra and gamma-ray light curves (for the continuum and for the lines at 511, 478 and 1275 keV) have been analyzed, with a special emphasis on the difference between carbon-oxygen and oxygen-neon novae. Predictions of detectability of individual novae by the future SPI spectrometer on board the INTEGRAL satellite are made.
description: Accepted for publication in MNRAS, 9 pages, 9 figures. Revised version: only figure 2 has been changed
Testing the ABS method with the simulated Planck temperature maps
Creators: name: Yao, Jian
name: Zhang, Le
name: Zhao, Yuxi
name: Zhang, Pengjie
name: Santos, Larissa
name: Zhang, Jun
Publisher: name: arXiv
Year: 2018
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: In this study, we apply the Analytical method of Blind Separation (ABS) of the cosmic microwave background (CMB) from foregrounds to estimate the CMB temperature power spectrum from multi-frequency microwave maps. We test the robustness of the ABS estimator and assess the accuracy of the power spectrum recovery by using realistic simulations based on the seven-frequency Planck data, including various frequency-dependent and spatially-varying foreground components (synchrotron, free-free, thermal dust and anomalous microwave emission), as well as an uncorrelated Gaussian-distributed instrumental noise. Considering no prior information about the foregrounds, the ABS estimator can analytically recover the CMB power spectrum over almost all scales with less than $0.5\%$ error for maps where the Galactic plane region ($|b|<10^{\circ}$) is masked out. To further test the flexibility and effectiveness of the ABS approach in a variety of situations, we apply the ABS to the simulated Planck maps in three cases: (1) without any mask, (2) imposing a two-times-stronger synchrotron emission and (3) including only the Galactic plane region ($|b|<10^{\circ}$) in the analysis. In such extreme cases, the ABS approach can still provide an unbiased estimate of band powers at the level of 1 $μ\rm{K}^2$ on average over all $\ell$ range, and the recovered powers are consistent with the input values within 1-$σ$ for most $\ell$ bins.
description: 12 pages, 11 figures, revised version, accepted to APJS
title: Bing vs. Malevich
title: A Case of an AI Suprematism
titleType: Subtitle
Creators: name: Q
Publisher: name: Zenodo
Year: 2024

description: Bing: I'm sorry, but Pi and Bard are both wrong. The web search results clearly show that the first artist mentioned by Alfred Barr in his introduction of the 1936 MoMA exhibition catalog "Cubism and Abstract Art" was Paul Cezanne... Kazimir Malevich was mentioned later in the introduction, as one of the pioneers of geometric abstract art and the founder of Suprematism."
Economic Model for Neutrino Masses and Mixings
Creators: name: Frampton, Paul H.
Publisher: name: arXiv
Year: 2000
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Working in the framework of three chiral neutrinos with Majorana masses, we investigate a scenario where the neutrino mass matrix is strictly off-diagonal in the flavor basis, with all its diagonal entries precisely zero.
description: 3 pages LaTeX. Write-up of talk at DPF2000, August 9,2000
Height variation of the cutoff frequency in a sunspot umbra
Creators: name: Felipe, T.
name: Kuckein, C.
name: Thaler, I.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: In the solar atmosphere, the acoustic cutoff frequency is a local quantity which depends on the atmospheric height. It separates the low-frequency evanescent waves from the high-frequency propagating waves. We measure the cutoff frequency of slow magnetoacoustic waves at various heights of a sunspot umbra and compare the results with the estimations from several analytical formulae. We analyzed the oscillations in the umbra of a sunspot belonging to active region NOAA 12662 observed in the 10830 Å spectral region with the GREGOR Infrared Spectrograph and in the Fe I 5435 Å line with the GREGOR Fabry-Pérot Interferometer. Both instrumets are attached to the GREGOR telescope at the Observatorio del Teide, Tenerife, Spain. We have computed the phase and amplification spectra between the velocity measured from different pairs of lines that sample various heights of the solar atmosphere. The cutoff frequency and its height variation have been estimated from the inspection of the spectra. At the deep umbral photosphere the cutoff frequency is around 5 mHz and it increases to 6 mHz at higher photospheric layers. At the chromosphere the cutoff is $\sim 3.1$ mHz. The comparison of the observationally determined cutoff with the theoretically predicted values reveals an agreement in the general trend and a reasonable match at the chromosphere, but also significant quantitative differences at the photosphere. Our analyses show strong evidence of the variation of the cutoff frequency with height in a sunspot umbra, which is not fully accounted for by current analytical estimations. This result has implications for our understanding of wave propagation, the seismology of active regions, and the evaluation of heating mechanisms based on compressible waves.
description: Accepted for publication in A&A
Additional file 1: of Membrane associated collagen XIII promotes cancer metastasis and enhances anoikis resistance
Creators: name: Zhang, Hui
name: Fredericks, Tricia
name: Xiong, Gaofeng
name: Qi, Yifei
name: Rychahou, Piotr
name: Li, Jia-Da
name: Pihlajaniemi, Taina
name: Xu, Wei
name: Xu, Ren
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Plant Biology
subject: FOS: Biological sciences

description: Figure S1. Kaplan-Meier analysis of recurrence free survival in ER positive breast cancer patients; the patients were equally divided into two groups based on the mRNA level of Col13 in breast cancer tissue. n = 1802. **p < 0.01. (PDF 2061 kb)