Additional file 2 of Deciphering core phyllomicrobiome assemblage on rice genotypes grown in contrasting agroclimatic zones: implications for phyllomicrobiome engineering against blast disease
Creators: name: Sahu, Kuleshwar Prasad
name: Kumar, A.
name: Sakthivel, K.
name: Reddy, Bhaskar
name: Kumar, Mukesh
name: Patel, Asharani
name: Sheoran, Neelam
name: Gopalakrishnan, Subbaiyan
name: Prakash, Ganesan
name: Rathour, Rajeev
name: Gautam, R. K.
Publisher: name: figshare
Year: 2022
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 2. Fig. S1. Identification of biomarkers based on the linear discriminant analysis (LDA) and effect size (LEfSe) pipeline; (A) Two genotypes (PRR78 and Pusa1602); (B) Two locations (Palampur and Port Blair). Fig. S2. Network analysis of rice phyllosphere microbiome using SparCC correlation coefficients (Normal group). Fig. S3. Extended error bar plot at various taxonomic hierarchy levels for phyllomicrobiome of rice genotypes, PRR78 and Pusa1602. Fig. 4. Extended error bar plot at various taxonomic hierarchy levels for phyllomicrobiome of rice grown in Palampur, Himachal Pradesh and Port Blair, Andaman Island. Fig. 5. Relative abundance of phyllosphere bacterial communities on rice genotypes grown in two agroclimatic zones of India. Fig. S6. Relative abundance of phyllosphere bacterial communities at genus level on two rice genotypes representing contrasting agroclimatic zones of India. Fig. 7. BOX PCR fingerprinting of cultured bacterial isolates of rice phyllosphere; M: DNA size marker; Lanes: Isolates of bacteria isolated from the phyllosphere of rice leaf. Fig. 8. Amplification of 16S rRNA of bacterial isolates of rice phyllosphere. Fig. 9a. Colonies of cultured Acidovorax species from rice phyllomicrobiome. Fig. S9b. Colonies of cultured Acinetobacter species from rice phyllomicrobiome. Fig. 9c. Colonies of cultured Agrobacterium species from rice phyllomicrobiome. Fig. S9d. Colonies of cultured Aureimonas species from rice phyllomicrobiome. Fig. S9e. Colonies of cultured Curtobacterium species from rice phyllomicrobiome. Fig. 9f. Colonies of cultured Enterobacter species from rice phyllomicrobiome. Fig. S9g. Colonies of cultured Erwinia species from rice phyllomicrobiome. Fig. 9h. Colonies of cultured Exiguobacterium species from rice phyllomicrobiome. Fig. S9i. Colonies of cultured Microbacterium species from rice phyllomicrobiome. Fig. S9j. Colonies of cultured Micrococcus species from rice phyllomicrobiome. Fig. S9k. Colonies of cultured Pantoea species from rice phyllomicrobiome. Fig. S9l. Colonies of cultured Pseudomonas species from rice phyllomicrobiome. Fig. 9m. Colonies of cultured Sphingomonas species from rice phyllomicrobiome. Fig. S10. Secreted metabolite mediated in vitro antifungal activity of rice phyllosphere bacterial isolates on Magnaporthe oryzae. Fig. S11. Volatile mediated in vitro antifungal activity of rice phyllosphere bacterial isolates on Magnaporthe oryzae. Fig. S12. Analysis of nature of BVC mediated growth inhibition of Magnaporthe oryzae. Fig. S13. Effect of phyllobacterization on rice blast disease incited by Magnaporthe oryzae. Fig. S14. qPCR based transcriptional analysis of defense genes expression in rice seedlings upon phyllobacterization.