cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1: of Evaluating the usefulness of alignment filtering methods to reduce the impact of errors on evolutionary inferences
Creators: name: Franco, Arnaud Di
name: RaphaĂŤl Poujol
name: Baurain, Denis
name: HervĂŠ Philippe
Publisher: name: figshare
Year: 2019
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Table S1. Comparison of mean sensitivity and mean specificity between HmmCleaner presets and PREQUAL. Table S2. Mean R2 value for branch length. Figure S1. Mean sensitivity and specificity of HmmCleaner towards detection of primary sequence errors introduced in ambiguously aligned regions (AARs). Figure S2. Impact of the conditions of simulation on sensitivity (A,C,E) and specificity (B,D,F) of HmmCleaner. Figure S3. Impact of the multiple alignment software on sensitivity (A) and specificity (B) of HmmCleaner used with the default scoring matrix. Figure S4. Impact of the HmmCleaner algorithm on its sensitivity (A) and specificity (B) when used with the default scoring matrix. Figure S5. Impact of the length and number of primary sequence errors, and of the prokaryotic lineage, on sensitivity (A,C,E) and specificity (B,D,F) of PREQUAL. A,B. Figure S6. Impact of the conservation context of introduced primary sequence errors on sensitivity of HmmCleaner used with the default scoring matrix for different error lengths. Figure S7. Impact of the conservation context of introduced primary sequence errors on specificity of HmmCleaner used with the default scoring matrix for different numbers of errors. (PDF 1324 kb)
Photonic quantum memory using an intra-atomic frequency comb
Creators: name: Teja, G. P.
name: Simon, Christoph
name: Goyal, Sandeep K.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Photonic quantum memory, such as an atomic frequency comb (AFC), is essential to make photonic quantum computation and long distance quantum communication scalable and feasible. In standard AFC the frequency of different atoms must be stable relative to each other which presents difficulties in realizing the quantum memory. Here we propose a quantum memory using an intra-atomic frequency comb which does not require frequency stabilization. We show that the transitions between two degenerate energy levels of a single atom can be used to construct the frequency comb. The spacing between the teeth of the comb is controlled by applying an external magnetic field. Since the frequency comb is constructed from individual atoms, these atoms can be used alone or in ensembles to realize the quantum memory. Furthermore, the ensemble based quantum memory with intra-AFC is robust against Doppler broadening which makes it useful for high-temperature quantum memory. As an example, we numerically show the intra-AFC in cesium atoms and demonstrate a photon echo which is essential for quantum memory.
Cusp Universality for Random Matrices II: The Real Symmetric Case
Creators: name: Cipolloni, Giorgio
name: Erdős, László
name: Krüger, Torben
name: Schröder, Dominik
Publisher: name: arXiv
Year: 2018
Subjects: subject: Probability (math.PR)
subject: Mathematical Physics (math-ph)
subject: FOS: Mathematics
subject: FOS: Physical sciences
subject: 60B20, 15B52

description: We prove that the local eigenvalue statistics of real symmetric Wigner-type matrices near the cusp points of the eigenvalue density are universal. Together with the companion paper [arXiv:1809.03971], which proves the same result for the complex Hermitian symmetry class, this completes the last remaining case of the Wigner-Dyson-Mehta universality conjecture after bulk and edge universalities have been established in the last years. We extend the recent Dyson Brownian motion analysis at the edge [arXiv:1712.03881] to the cusp regime using the optimal local law from [arXiv:1809.03971] and the accurate local shape analysis of the density from [arXiv:1506.05095, arXiv:1804.07752]. We also present a PDE-based method to improve the estimate on eigenvalue rigidity via the maximum principle of the heat flow related to the Dyson Brownian motion.
description: 62 pages. Updated version with additional references
Fundemental User Needs (FUN) Scales
Creators: name: Huang, Siyuan
Publisher: name: Zenodo
Year: 2025
Subjects: Need Measurement
Human-Centered Design
User-Centered Design
Human-Computer Interaction

description: The Fundamental User Needs (FUN) Scales is a newly introduced instrument tailored to assess how design-mediated interactions influence users' need satisfaction and frustration. The FUN Scales offer significant value to HCI and design research and practice, including the following benefits:

Provides a shared and consistent language for discussing user needs, enabling standardized evaluations and comparisons across different projects and studies.

Facilitates collaboration between HCI experts, designers, engineers, and other stakeholders by offering a common framework for understanding user needs.

Bridges the gap between theoretical research on basic psychological needs and practical HCI and design applications, ensuring design decisions are evidence-based.

Supports the development of need-oriented design principles, grounded in empirical research, that prioritize fundamental user needs in design-mediated interactions.

Empowers informed design decisions, guiding the design of features and functionalities that focus on fulfilling fundamental users' needs.
The use of image classification to estimate flamingo abundance from aerial, drone and satellite imagery
Creators: name: Colyn, RB
name: Anderson, TA
name: Anderson, MD
name: Retief, EF
name: Van der Westhuizen-Coetzer, EJ
name: Smit-Robinson, H
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified

description: The Lesser Flamingo Phoeniconaias minor is a Near Threatened species known to be highly gregarious and that can concentrate in large numbers at core foraging and breeding sites, yet is also known to disperse widely in search of suitable foraging habitat. The density of flamingos at occupied sites, together with frequent dispersal between foraging sites, poses significant challenges to obtaining reliable counts and associated population estimates. Our study tested the use of unmanned aerial vehicles (drones) imagery and high-resolution satellite imagery for producing density estimates of Lesser Flamingos at the only known breeding site in South Africa (Kamfers Dam, Northern Cape Province). We implemented a supervised classification approach using multiple supervised classification algorithms, including xgbTree, randomForest, nnet and GBM. The four supervised classification models performed very well at classifying flamingos from both drone and satellite imagery, with classification accuracies ranging between 0.98 and 0.99. The inclusion of an additional predictor (other than RGB bands) yielded the highest variable importance score and greatly increased model accuracy and predictive performance. Estimates of adult flamingos from drone imagery acquired across nesting mudflats on 5 February (n = 1 320) and 14 February (n = 330) 2019 suggested a 75% decline in incubating adults. Furthermore, a total of 16 134 (15 973–16 295) flamingos were estimated from drone imagery on 1 March 2019, and 17 291 (17 118–17 290) flamingos from satellite imagery on 19 March 2019. The modelled size of the creche across dates suggested a loss of 234 birds (4.5%) during the period of assessment, with the highest count estimating 5 218 juveniles. Our study successfully implemented machine learning classifiers that were able to detect and derive highly accurate counts of Lesser Flamingos from both drone and satellite imagery. This use of machine learning could greatly improve the efficiency of monitoring and associated conservation efforts underway for the Lesser Flamingo.
Random Matrix Model for Wilson Fermions on the Lattice
Creators: name: Hehl, Holger
name: Schäfer, Andreas
Publisher: name: arXiv
Year: 1998
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We describe a random matrix model suitable for the simulation of the eigenvalues of the Dirac operator on the lattice for Wilson fermions. We compare the obtained global eigenvalue spectrum for various values of the hopping parameter κwith lattice results of Kalkreuter. The agreement is surprisingly good.
description: REVTeX, 5 pages, 10 .eps figures, changed figure captions, updated references, minor changes
Additional file 1: of Surrogacy of intermediate endpoints for overall survival in randomized controlled trials of first-line treatment for advanced soft tissue sarcoma in the pre- and post-pazopanib era: a meta-analytic evaluation
Creators: name: Tanaka, Kazuhiro
name: Kawano, Masanori
name: Iwasaki, Tatsuya
name: Itonaga, Ichiro
name: Tsumura, Hiroshi
Publisher: name: figshare
Year: 2019
Subjects: Space Science
Medicine
Molecular Biology
Cancer
Science Policy

description: Table S1: Detailed description of the RCTs included in this meta-analysis. (DOCX 29 kb)
The optimal gravitational softening length for cosmological N-body simulations
Creators: name: Zhang, Tianchi
name: Liao, Shihong
name: Li, Ming
name: Gao, Liang
Publisher: name: arXiv
Year: 2018
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: Gravitational softening length is one of the key parameters to properly set up a cosmological $N$-body simulation. In this paper, we perform a large suit of high-resolution $N$-body simulations to revise the optimal softening scheme proposed by Power et al. (P03). Our finding is that P03 optimal scheme works well but is over conservative. Using smaller softening lengths than that of P03 can achieve higher spatial resolution and numerically convergent results on both circular velocity and density profiles. However using an over small softening length overpredicts matter density at the inner most region of dark matter haloes. We empirically explore a better optimal softening scheme based on P03 form and find that a small modification works well. This work will be useful for setting up cosmological simulations.
description: 7 pages, 4 figures, version accepted by MNRAS
Using stakeholder knowledge to co-produce research priorities for a raptor species vulnerable to impacts of wind energy facilities
Creators: name: Nkomo, Merlyn Nomusa
name: Murgatroyd, Megan
name: Ralston-Paton, Samantha
name: Amar, Arjun
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Science Policy
subject: Plant Biology

description: The global energy transition necessitates a rapid increase in infrastructure in developing countries, including for wind energy facilities (WEFs). Concerns arise regarding the negative impacts of WEFs on biodiversity, especially on birds of prey or raptors and other volant animals. In Africa, South Africa has the largest installed wind energy capacity and also hosts several raptor species of conservation importance. One such raptor is the regionally endemic Jackal Buzzard Buteo rufofuscus (family Accipitridae), which has its core population in South Africa. Despite frequent fatalities from collisions with wind turbine blades, this species is understudied. To address this gap, we conducted interviews with key stakeholders in the wind energy sector, including avifaunal specialists, wind energy developers, government representatives, and conservation nongovernmental organisations. The goal was to begin a cooperative process to identify crucial research gaps and to establish a future research agenda for Jackal Buzzards in the context of wind energy development. Stakeholders expressed confidence in current environmental impact assessment (EIA) techniques but highlighted a concern for direct collisions as a significant threat to Jackal Buzzards. The consensus was that WEFs are more likely to cause local rather than national population-level impacts. Although stakeholders generally shared similar opinions, minor differences emerged between groups. Movement ecology studies were identified as a high priority for future research on this species. By collaboratively formulating research priorities, this study aims to improve the relevance of future investigations, fostering stakeholder buy-in for potential policy and EIA practice recommendations.
Scaling approach to order-parameter fluctuations in disordered frustrated systems
Creators: name: Ritort, Felix
name: Sales, Marta
Publisher: name: arXiv
Year: 2000
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: We present a constructive approach to obtain information about the compactness and shape of large-scale lowest excitations in disordered systems by studying order-parameter fluctuations (OPF) at low temperatures. We show that the parameter $G$ which measures OPF is 1/3 at T=0 provided the ground state is unique and the probability distribution for the lowest excitations is gapless and with finite weight at zero-excitation energy. We then apply zero-temperature scaling to describe the energy and volume spectra of the lowest large-scale excitations which scale with the system size and have a weight at ze ro energy $\hat{P}_v(0)\sim l^{-θ'}$ with $v=l^d$. A low-temperature expansion reveals that, OPF vanish like $L^{-θ}$, if $θ> 0$ and remain finite for space filling lowest excitations with $θ=0$. The method can be extended to extract information about the shape and fractal surface of the large-scale lowest excitations.
description: 4 pages, REVTeX. Some modifications; final version accepted for publication in J. Phys. A: Math. and General (Letters)
The African Penguin Spheniscus demersus should be considered Critically Endangered
Creators: name: Sherley, Richard B
name: Makhado, Azwianewi B
name: Crawford, Robert JM
name: Hagen, Christina
name: Kemper, Jessica
name: Ludynia, Katrin
name: Masotla, Makhudu J
name: McInnes, Alistair
name: Pichegru, Lorien
name: Tom, Desmond
name: Upfold, Leshia
name: Waller, Lauren J
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Statistics
subject: FOS: Mathematics
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: The African Penguin Spheniscus demersus has been considered a threatened species since 1984 and, aside from a short period around 2000, its population has been in constant decline since at least the 1950s. By combining counts of the numbers of breeding pairs made at 26 colonies in South Africa and Namibia between 1979 and 2023 with Bayesian state–space models we reassess the species’ conservation status. The breeding population has declined by 77.8% (95% credible intervals: 71.8–84.6%) over the last 30 years (3 generations), from ∼44 300 breeding pairs in 1993 to ∼9 900 pairs in 2023. This falls just below the threshold for a global IUCN Red List status of Critically Endangered (CR) under criterion A2. However, the decline in Namibia exceeds that threshold at the national level (30-year decline = 82.4%, 78.2–86.2%) following the loss of ∼3 600 breeding pairs there in the last 5 years. In South Africa, the Western Cape population is now declining at <1.5% per annum, but the annual rate of decline in the Eastern Cape has worsened substantially, reaching 13% over the last 10 years. Overall, the global population has more than halved in the last decade and has fallen below 10 000 pairs for the first time. Moreover, “moving window reductions” over 3 generations using observed and projected population trajectories (up to the year 2033) indicate that the decline of the African Penguin population will exceed the 80% CR threshold (under criterion A4ab) with a high probability by 2028. Accordingly, we propose that the African Penguin should be transferred to the IUCN Red List category Critically Endangered.
DEVELOPING WISELY RANDOMIZED WEIGHTED THROTTLED LOAD-BALANCING ALGORITHM FOR CLOUD-COMPUTING ENVIRONMENT
Creators: name: EYOB SAMUEL TEFERA
Publisher: name: National Academic Digital Repository of Ethiopia
Year: 2019
Subjects: Load Balancing, Cloud Computing, Virtual Machine, Virtualization, CloudAnalyst, Response Time, Response Utilization

description: From other challenges of cloud computing, Load balancing is one of the main issues in the environment. Due to current vast demand on the technology, the load-balancing algorithms must have the ability to control the efficiency in distributing the loads across the resources. Not only this, but they must also ensure the usage if the resources in smart strategy so that some resources will not be on over-utilization state and others are in under-utilization. Many researchers proposed various load balancing and job scheduling algorithms in cloud computing, but there is still some inefficiency in the system performance and load imbalance.
 The objective of this research is to develop efficient and fair load balancing algorithm for a cloud computing environment and compare the result of the proposed algorithm with the well-known load balancing algorithms. The efficiency of the proposed algorithm is based on response time and data processing time, and the fairness is based on resource utilization parameter.
 Therefore, in this research, we propose a load balancing algorithm to improve the performance, efficiency, and distribution of load on a homogeneous cloud computing environment, in terms of response time and resource utilization. We propose an improved algorithm based on randomization and weight (by checking bandwidth). The algorithm has a wise random picking strategy during selecting two random Virtual Machines. This helps to have two unique Virtual Machines and to escape unnecessary checking of similar VMs’ bandwidth.
 The efficiency of response time, resource utilization, and data processing time of the proposed algorithm is analyzed using CloudAnalyst simulator and compare with the other well-known and related existing algorithm called Randomized, Throttled, Randomized Weighted Throttled algorithms. The results showed improvements on average response time and resource utilization especially when we put much pressure by sending large amount of request-per-user.
Fractional-flux Little-Parks resistance oscillations in disordered superconducting Au$_{0.7}$In$_{0.3}$ cylinders
Creators: name: Zadorozhny, Yu.
name: Liu, Y.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Resistance of disordered superconducting Au$_{0.7}$In$_{0.3}$ cylindrical films was measured as a function of applied magnetic field. In the high-temperature part of the superconducting transition regime, the resistance oscillated with a period of $h/2e$ in the unit of the enclosed magnetic flux. However, at lower temperatures, the resistance peaks split. We argue that this splitting is due to the emergence of an oscillation with a period of $h/4e$, half of the flux quantum for paired electrons. The possible physical origin of the $h/4e$ resistance oscillation is discussed in the context of new minima in the free energy of a disordered superconducting cylinder.
description: 8 pages with figures, published in Europhys. Lett
The equivalence of two tax processes
Creators: name: Ghanim, Dalal Al
name: Loeffen, Ronnie
name: Watson, Alex
Publisher: name: arXiv
Year: 2018
Subjects: subject: Probability (math.PR)
subject: Pricing of Securities (q-fin.PR)
subject: FOS: Mathematics
subject: FOS: Economics and business
subject: 60G51, 91B30, 93E20, 91G80

description: We introduce two models of taxation, the latent and natural tax processes, which have both been used to represent loss-carry-forward taxation on the capital of an insurance company. In the natural tax process, the tax rate is a function of the current level of capital, whereas in the latent tax process, the tax rate is a function of the capital that would have resulted if no tax had been paid. Whereas up to now these two types of tax processes have been treated separately, we show that, in fact, they are essentially equivalent. This allows a unified treatment, translating results from one model to the other. Significantly, we solve the question of existence and uniqueness for the natural tax process, which is defined via an integral equation. Our results clarify the existing literature on processes with tax.
The initial singularity in solutions of the Einstein-Vlasov system of Bianchi type I
Creators: name: Rendall, Alan D.
Publisher: name: arXiv
Year: 1995
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: The dynamics of solutions of the Einstein-Vlasov system with Bianchi I symmetry is discussed in the case of massive or massless particles. It is shown that in the case of massive particles the solutions are asymptotic to isotropic dust solutions at late times. The initial singularity is more difficult to analyse. It is shown that the asymptotic behaviour there must be one of a small set of possibilities but it is not clear whether all of these possibilities are realized. One solution is exhibited in the case of massless particles which behaves quite differently near the singularity from any Bianchi I solution with perfect fluid as matter model. In particular the matter is not dynamically negligeable near the singularity for this solution.
description: 16 pages
Effect of Fiberglass Type and Nanosilica Content on The Flexural Strength of Glass Fiber Reinforced Polymer Composites
Creators: name: Wibawa, Tri
name: Diharjo, Kuncoro
name: Ariawan, Dody
name: Raharjo, Wijang Wisnu
name: Wibowo, Jalu Dewa Noor
Publisher: name: Zenodo
Year: 2024

description: This material has been presented on 3rd International Conference on Advanced Research in Engineering and Technology 2024 October 23 - 24, 2024.
Measurement of Elastic omega Photoproduction at HERA
Creators: name: ZEUS Collaboration
name: al, M. Derrick et
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: The reaction $γp \rightarrow ωp$ $(ω\rightarrow π^+π^-π^0$ and $π^0\rightarrowγγ)$ has been studied in $ep$ interactions using the ZEUS detector at photon-proton centre-of-mass energies between $70$ and $90 GeV$ and $|t| < 0.6 GeV^2$, where $t$ is the squared four momentum transferred at the proton vertex.The elastic \ome photoproduction cross section has been measured to be $σ_{γp\rightarrow ωp} = 1.21\pm 0.12\pm 0.23 μb$. The differential cross section $dσ_{γp\rightarrow ωp} /d|t|$ has an exponential shape $e^{-b |t|}$ with a slope $b = 10.0\pm 1.2\pm 1.3 GeV^{-2}$. The angular distributions of the decay pions are consistent with s-channel helicity conservation. When compared to low energy data, the features of $ω$ photoproduction as measured at HERA energies are in agreement with those of a soft diffractive process. Previous measurements of the $ρ^0$ and $ϕ$ photoproduction cross sections at HERA show a similar behaviour.
description: 32 pages including 7 figures Various changes throughout the text of paper
Additional file 3 of METABOLIC: high-throughput profiling of microbial genomes for functional traits, metabolism, biogeochemistry, and community-scale functional networks
Creators: name: Zhou, Zhichao
name: Tran, Patricia Q.
name: Breister, Adam M.
name: Liu, Yang
name: Kieft, Kristopher
name: Cowley, Elise S.
name: Karaoz, Ulas
name: Anantharaman, Karthik
Publisher: name: figshare
Year: 2022
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics

description: Additional file 2: Figure S2. Functional network diagram based on the transcriptomic dataset from a hydrothermal vent sample.
Additional file 1: of Quality of life and utility decrement associated with Clostridium difficile infection in a French hospital setting
Creators: name: Barbut, Frédéric
name: Galperine, Tatiana
name: Vanhems, Philippe
name: Monnier, Alban
name: Durand-Gasselin, Bernard
name: Canis, Frédérique
name: Jeanbat, Viviane
name: Duburcq, Anne
name: Alami, Sarah
name: Bensoussan, Caroline
name: Fagnani, Francis
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics

description: Table S1. EQ-5D-3 L results (n = 80 patients) (DOCX 34 kb)
The Wilson Effective Kähler Potential For Supersymmetric Nonlinear Sigma Models
Creators: name: Clark, T. E.
name: Love, S. T.
Publisher: name: arXiv
Year: 1997
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Renormalization group methods are used to determine the evolution of the low energy Wilson effective action for supersymmetric nonlinear sigma models in four dimensions. For the case of supersymmetric $CP^{(N-1)}$ models, the Kähler potential is determined exactly and is shown to exhibit a nontrivial ultraviolet fixed point in addition to a trivial infrared fixed point. The strong coupling behavior of the theory suggests the possible existence of additional relevant operators or nonperturbative degrees of freedom.
description: 9 pages, LaTeX, 1 eps figure
Additional file 1 of Spatial distribution and risk factors for human cysticercosis in Colombia
Creators: name: Galipó, Erika
name: Dixon, Matthew A.
name: Fronterrè, Claudio
name: Cucunubá, Zulma M.
name: Basáñez, Maria-Gloria
name: Stevens, Kim
name: Flórez Sánchez, Astrid Carolina
name: Walker, Martin
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Neuroscience
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: Additional file 1: Table S1. Notation of parameters used for model building (analysis of residual spatial correlation) and incorporation of spatial structure. Table S2. Seroprevalence of Taenia solium cysticercus antibodies in Colombia. Table S3. Distribution of seropositive individuals, crude odds ratios (ORs) of testing positive for Taenia solium cysticercus antibodies by ELISA and associated 95% confidence intervals (CIs) from the univariate mixed-effects model. Table S4. Distribution of seropositive individuals, multivariable mixed-effects logistic regression adjusted ORs of testing positive for Taenia solium cysticercus antibodies by ELISA and associated CIs. Table S5. Pig management sub-set analysis (n = 3154). Pig management practices, distribution of seropositive individuals, crude odds ratios (ORs) of testing positive for Taenia solium cysticercus antibodies by ELISA and associated 95% CIs. Figure S1. Map displaying the sampled municipalities in Colombia (2008–2010). Text S1. Supplementary methods. Text S2. Results: pig management sub-analysis
Charged Particle Multiplicities in Deep Inelastic Scattering at HERA
Creators: name: Aid, S.
Publisher: name: arXiv
Year: 1996
Subjects: subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: Using the H1 detector at HERA, charged particle multiplicity distributions in deep inelastic ep scattering have been measured over a large kinematical region. The evolution with $W$ and $Q^2$ of the multiplicity distribution and of the multiplicity moments in pseudorapidity domains of varying size is studied in the current fragmentation region of the hadronic centre-of-mass frame. The results are compared with data from fixed target lepton-nucleon interactions, $e^+e^-$ annihilations and hadron-hadron collisions as well as with expectations from QCD based parton models. Fits to the Negative Binomial and Lognormal distributions are presented.
description: 40 pages, latex, 8 Figures
Additional file 4 of METABOLIC: high-throughput profiling of microbial genomes for functional traits, metabolism, biogeochemistry, and community-scale functional networks
Creators: name: Zhou, Zhichao
name: Tran, Patricia Q.
name: Breister, Adam M.
name: Liu, Yang
name: Kieft, Kristopher
name: Cowley, Elise S.
name: Karaoz, Ulas
name: Anantharaman, Karthik
Publisher: name: figshare
Year: 2022
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics

description: Additional file 3: Figure S3. Functional network diagram based on the transcriptomic dataset from a deep-sea background sample.
Measurement of Helicity Parameters in Top Quark Decay
Creators: name: Nelson, Charles A.
name: Cohen, Andrew M.
Publisher: name: arXiv
Year: 1998
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The standard model(SM) predicts only a $g_{V-A}$ coupling in $t \to W^+ b$ decay. However, if additional Lorentz structures exist, they can manifest themselves in high energy processes such as this via non-SM values of the helicity parameters describing $t \to W^+ b$. Plots and tables of the values of these helicity parameters are obtained for various coupling strengths. Three phase-type ambiguities are uncovered: $g_{V-A} + g_{S+P}$ with effective-mass scale $Λ_{S+P} \sim -35 GeV, g_{V-A} + g_{f_M + f_E}$ with $Λ_{f_M + f_E} \sim 53 GeV$, and an arbitrary sign-flip in the $b_L$ amplitudes $A_{X} (λ_b = - 1/2) = - A_{V-A} (λ_b = - 1/2)$. These ambiguities are analyzed so that they might be partially resolved when experiments resume at the Fermilab Tevatron.
description: LateX file plus 6 tables and 9 figures; no macros
Symphony on Strong Field Approximation
Creators: name: Amini, Kasra
name: Biegert, Jens
name: Calegari, Francesca
name: Chacón, Alexis
name: Ciappina, Marcelo F.
name: Dauphin, Alexandre
name: Efimov, Dmitry K.
name: Faria, Carla Figueira de Morisson
name: Giergiel, Krzysztof
name: Gniewek, Piotr
name: Landsman, Alexandra S.
name: Lesiuk, Michał
name: Mandrysz, Michał
name: Maxwell, Andrew S.
name: Moszyński, Robert
name: Ortmann, Lisa
name: Pérez-Hernández, Jose Antonio
name: Picón, Antonio
name: Pisanty, Emilio
name: Prauzner-Bechcicki, Jakub
name: Sacha, Krzysztof
name: Suárez, Noslen
name: Zaïr, Amelle
name: Zakrzewski, Jakub
name: Lewenstein, Maciej
Publisher: name: arXiv
Year: 2018
Subjects: subject: Quantum Physics (quant-ph)
subject: Atomic Physics (physics.atom-ph)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: This paper has been prepared by the Symphony collaboration (University of Warsaw, Uniwersytet Jagielloński, DESY/CNR and ICFO) on the occasion of the 25th anniversary of the "simple man's models" which underlie most of the phenomena that occur when intense ultrashort laser pulses interact with matter. The phenomena in question include High-Harmonic Generation, Above-Threshold Ionization, and Non-Sequential Multielectron Ionization. "Simple man's models" provide, both an intuitive basis for understanding the numerical solutions of the time-dependent Schrödinger equation, and the motivation for the powerful analytic approximations generally known as the Strong Field Approximation (SFA). In this paper we first review the SFA in the form developed by us in the last 25 years. In this approach SFA is a method to solve the TDSE using a systematic perturbation theory in a part of the Hamiltonian describing continuum-continuum transitions in the presence of the laser field. In this review we focus on recent applications of SFA to HHG, ATI and NSMI from multi-electron atoms and from multi-atom. The main novel part of the presented theory concerns generalizations of SFA to: (i) time-dependent treatment of two-electron atoms, allowing for studies of an interplay between Electron Impact Ionization (EII) and Resonant Excitation with Subsequent Ionization (RESI); (ii) time-dependent treatment in the single active electron (SAE) approximation of "large" molecules and targets which are themselves undergoing dynamics during the HHG or ATI process. In particular, we formulate the general expressions for the case of arbitrary molecules, combining input from quantum chemistry and quantum dynamics. We formulate also theory of time-dependent separable molecular potentials to model analytically the dynamics of realistic electronic wave packets for molecules in strong laser fields.
description: We dedicate this work to the memory of Bertrand Carr\'e, who passed away in March 2018 at the age of 60. This Accepted Manuscript is available under the CC BY-NC-ND license (https://creativecommons.org/licenses/by-nc-nd/3.0/)
Spin and Orbital Order in Itinerant Ferromagnets
Creators: name: Fazekas, P.
Publisher: name: arXiv
Year: 2000
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: The long-standing problem of the effect of correlations on the ferromagnetism of is apparently nearing solution. The ferromagnetism of transition metals compounds, for instance doped manganites, poses a new question: is there some kind of orbital order coexisting with itinerant ferromagnetism? The ideas and techniques introduced by Gutzwiller should be of use again.
description: Dedicated to Martin C. Gutzwiller on the occasion of his 75th birthday. 13 pages, 2 figures
title: Monumental it is: Ένας διάλογος μεταξύ του παρελθόντος και του παρόντος μέσα από την αρχιτεκτονική προσέγγιση του David Chipperfield
title: Monumental it is: A dialogue between the past and the present through David Chipperfield's architectural approach
Creators: name: Σαμπανη Ασημινα-Ιωαννα
Publisher: name: Technical University of Crete
Year: 2025

description: Η ερευνητική εργασία πραγματεύεται τον όρο της μνημειακότητας στην αρχιτεκτονική μέσα από θεωρίες και παραδείγματα, αναλύοντας κτίρια που ανήκουν στο παρελθόν με σύγχρονες επεμβάσεις, αλλά και “μνημεία” των πρόσφατων χρόνων. Επιλέγοντας τον αρχιτέκτονα David Chipperfield, διερευνούνται οι σκέψεις και το έργο του έχοντας ως βασικό άξονα τη μνημειακότητα και εστιάζοντας σε τρία από τα πιο σημαντικά του έργα. Συγκεκριμένα, εξετάζονται η αποκατάσταση του Μουσείου Neues, η Γκαλερί James Simon και η επέκταση του Κοιμητηρίου San Michele, μέσα από την ανάλυση πέντε εννοιών: του πλαισίου (context), της παράδοσης (tradition), της μνήμης (memory), της μορφής (form) και της συνέχειας (continuity) - πέντε όρους που επαναλαμβάνονται από τον αρχιτέκτονα σε αναφορές στα έργα του, ενώ επιχειρείται η συνθετική ανάλυση του κάθε κτιρίου. Παράλληλα, μέσω αυτών των πέντε θεματικών στοχεύεται η ανάδειξη της έννοιας του μνημειακού μέσα από τις διαφορετικές πτυχές του κάθε παραδείγματος. Τέλος, διερευνάται η σχέση μεταξύ του παλαιού και νέου, οι συγκρούσεις αλλά και αρμονίες που προκύπτουν.

description: This essay examines the term monumentality in architecture through theories and examples, including buildings that belong to the past with modern interventions and "monuments" of recent years.

By focusing on the architect David Chipperfield, his thoughts and work are explored with monumentality as the main axis, focusing on four of his most important works. Specifically, the refurbishment of the Neues Museum, the James-Simon-Gallery, and the extension of San Michele Cemetery are examined, focusing on the terms context, tradition, memory, form, and continuity, five terms that the architect frequently uses in his projects, while attempting the architectural analysis of each case. At the same time, through these five keywords, the highlighting of monumentality is aimed at the different aspects of each example. Also, the relationship between the old and the new, the conflicts, and the harmonies that arise are discussed.
Two-dimensional weak localization effects in high temperature superconductor Nd{2-x}Ce{x}CuO{4-d}
Creators: name: Harus, G. I.
name: Ignatenkov, A. N.
name: Ponomarev, A. I.
name: Sabirzyanova, L. D.
name: Shelushinina, N. G.
name: Ivanov, A. A.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: A systematic study of the resistivity and Hall effect in single crystal Nd{2-x}Ce{x}CuO{4-d} films (0.12 < x < 0.20) is presented, with special emphasis on the low-temperature dependence of the normal state conductance. Two-dimensional weak localization effects are found both in a normally conducting underdoped sample (x = 0.12) and in situ superconducting optimally doped (x = 0.15) or overdoped (x = 0.18) samples in a high magnetic field B > B{c2}. The phase coherence time and the effective thickness of a CuO{2} conducting layer {d} (~ 1.5 A) have been estimated by fitting 2D weak localization theory expressions to the magnetoresistivity data for magnetic fields perpendicular to the {ab} plane and in plane. Estimates of the parameter {d} ensure the condition of strong carrier confinement and justify a model consisting of almost decoupled 2D metallic sheets for the Nd{2-x}Ce{x}CuO{4-d} single crystal.
description: 7 pages, 9 postscript figures
GRAVITATIONAL RADIATION FROM REALISTIC COSMIC STRING LOOPS
Creators: name: Casper, Paul
name: Allen, Bruce
Publisher: name: arXiv
Year: 1995
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We examine the rates at which energy and momentum are radiated into gravitational waves by a large set of realistic cosmic string loops. The string loops are generated by numerically evolving parent loops with different initial conditions forward in time until they self-intersect, fragmenting into two child loops. The fragmentation of the child loops is followed recursively until only non-self-intersecting loops remain. The properties of the final non-self-intersecting loops are found to be independent of the initial conditions of the parent loops. We have calculated the radiated energy and momentum for a total of 11,625 stable child loops. We find that the majority of the final loops do not radiate significant amounts of spatial momentum. The velocity gained due to the rocket effect is typically small compared to the center-of-mass velocity of the fragmented loops. The distribution of gravitational radiation rates in the center of mass frame of the loops, $γ^0 \equiv (Gμ^2)^{-1} ΔE/Δτ$, is strongly peaked in the range $γ^0=45-55$, however there are no loops found with $γ^0 < 40$. Because the radiated spatial momentum is small, the distribution of gravitational radiation rates appears roughly the same in any reference frame. We conjecture that in the center-of-mass frame there is a lower bound $γ^0_{\rm min}>0$ for the radiation rate from cosmic string loops. In a second conjecture, we identify a candidate for the loop with the minimal radiation rate and suggest that $γ^0_{\rm min}\cong 39.003$.
description: Tarred, gzipped, and uuencoded using uufiles. 15 pages plus 29 figures
Additional file 1: of Manhattan Harvester and Cropper: a system for GWAS peak detection
Creators: name: Haller, Toomas
name: TĂľnis Tasa
name: Metspalu, Andres
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Plant Biology

description: Supplementary table and figures that show the parameters computed by MH and the Cropper interface. (PDF 679â kb)
Manifestly covariant formulation of discrete-spin and real-mass unitary representations of the Poincare group
Creators: name: Czachor, Marek
Publisher: name: arXiv
Year: 1997
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Manifestly covariant formulation of discrete-spin, real-mass unitary representations of the Poincaré group is given. We begin with a field of spin-frames associated with 4-mometa p and use them to simplify the eigenvalue problem for the Pauli-Lubanski vector projection in a direction given by a world-vector t. As opposed to the standard treatments where t is a constant time direction, our t is in general p-dependent and timelike, spacelike or null. The corresponding eigenstates play a role of a basis used to define Bargmann-Wigner spinors which form a carrier space of the unitary representation. The construction does not use the Wigner-Mackey induction procedure, is manifestly covariant and works simultaneously in both massive and massless cases (in on- and off-shell versions). Of particular interest are special Bargmann-Wigner spinors ($ω$-spinors) associated with flag pole directions of the spin-frame field $ω_A(p)$.
description: revtex, 21 pages, submitted to Proc.Roy.Soc.London
MOESM5 of Plant growth-promoting rhizobacterium Pseudomonas PS01 induces salt tolerance in Arabidopsis thaliana
Creators: name: Chu, Thanh
name: Tran, Bao
name: Bui, Le
name: Hoang, Minh
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Physiology
subject: Biotechnology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Hematology
subject: Plant Biology

description: Additional file 5: Figure S3. Effects of NaCl and PS01 on A. thaliana salt tolerance in vitro under different NaCl concentrations. Non-inoculated A. thaliana grown on MS ½ supplemented with NaCl 0 mM (A1), NaCl 75 mM (A2), NaCl 150 mM (A3),175 mM (A4), 200 mM (A5), 225 mM (A6). A. thaliana inoculated with E. coli grown on MS ½ supplemented with NaCl 0 mM (B1), NaCl 75 mM (B2), NaCl 150 mM (B3), 175 mM (B4), 200 mM (B5), 225 mM (B6). A. thaliana inoculated with PS01 grown on MS ½ supplemented with NaCl 0 mM (C1), NaCl 75 mM (C2), NaCl 150 mM (C3), 175 mM (C4), 200 mM (C5), 225 mM (C6). White bars in the photographs correspond to 1 cm.
MOESM4 of Plant growth-promoting rhizobacterium Pseudomonas PS01 induces salt tolerance in Arabidopsis thaliana
Creators: name: Chu, Thanh
name: Tran, Bao
name: Bui, Le
name: Hoang, Minh
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: Plant Biology

description: Additional file 4: Figure S2. Pseudomonas PS01 colonies on Kingâ s B medium (A) and visualization of fluorescent colonies under UV light (B). Picture B was taken using 365Â nm as excitation wavelength. Gram staining of Pseudomonas PS01 cells (C).
Exenatide, metformin, or both for prediabetes in PCOS: A randomized, open-labeled, parallel-group controlled study
Creators: name: Zhang, Yi
name: Fu, JiaRong
name: Wang, Yuying
name: Zhu, Yuchen
name: Cai, Jie
name: Ma, Jingyu
name: Xu, Yu
name: Gao, YiNing
name: Sun, Yun
name: Fan, WuQiang
name: Liu, Wei
name: Tao, Tao
Publisher: name: figshare
Year: 2020
Subjects: classificationCode: 320208
subject: Endocrinology

description: summarizes
the demographic characteristics, baseline metabolic measures and hormonal
levels
STIM map: detection map for exoplanets imaging beyond asymptotic Gaussian residual speckle noise
Creators: name: Pairet, Benoît
name: Cantalloube, Faustine
name: Gonzalez, Carlos A. Gomez
name: Absil, Olivier
name: Jacques, Laurent
Publisher: name: arXiv
Year: 2018
Subjects: subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Physical sciences

description: Direct imaging of exoplanets is a challenging task as it requires to reach a high contrast at very close separation to the star. Today, the main limitation in the high-contrast images is the quasi-static speckles that are created by residual instrumental aberrations. They have the same angular size as planetary companions and are often brighter, hence hindering our capability to detect exoplanets. Dedicated observation strategies and signal processing techniques are necessary to disentangle these speckles from planetary signals. The output of these methods is a detection map in which the value of each pixel is related to a probability of presence of a planetary signal. The detection map found in the literature relies on the assumption that the residual noise is Gaussian. However, this is known to lead to higher false positive rates, especially close to the star. In this paper, we re-visit the notion of detection map by analyzing the speckle noise distribution, namely the Modified Rician distribution. We use non-asymptotic analysis of the sum of random variables to show that the tail of the distribution of the residual noise decays as an exponential distribution, hence explaining the high false detection rate obtained with the Gaussian assumption. From this analysis, we introduce a novel time domain detection map and we demonstrate its capabilities and the relevance of our approach through experiments on real data. We also provide an empirical rule to determine detection threshold providing a good trade off between true positive and false positive rates for exoplanet detection.
Additional file 1 of Reduced learning bias towards the reward context in medication-naive first-episode schizophrenia patients
Creators: name: Cheng, Xiaoyan
name: Wang, Lingling
name: Lv, Qinyu
name: Wu, Haisu
name: Huang, Xinxin
name: Yuan, Jie
name: Sun, Xirong
name: Zhao, Xudong
name: Yan, Chao
name: Yi, Zhenghui
Publisher: name: figshare
Year: 2022
Subjects: subject: Neuroscience
subject: Sociology
subject: FOS: Sociology
subject: Science Policy
subject: Mental Health

description: Additional file 1: Table S1. Valence and Arousal of GLA Task Stimuli.