cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Emergent ballistic transport of Bose-Fermi mixtures in one dimension
Creators: name: Wang, Sheng
name: Yin, Xiangguo
name: Chen, Yang-Yang
name: Zhang, Yunbo
name: Guan, Xi-Wen
Publisher: name: arXiv
Year: 2019
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: FOS: Physical sciences

description: The degenerate Bose-Fermi (BF) mixtures in one dimension present a novel realization of two decoupled Luttinger liquids with bosonic and fermionic degrees of freedom at low temperatures. However, the transport properties of such decoupled Luttinger liquids of charges have not yet been studied. Here we apply generalized hydrodynamics to study the transport properties of one-dimensional (1D) BF mixtures with delta-function interactions. The initial state is set up as the semi-infinite halves of two 1D BF mixtures with different temperatures, joined together at the time $t=0$ and the junction point $x=0$. Using the Bethe ansatz solution, we first rigorously prove the existence of conserved charges for both the bosonic and fermionic degrees of freedom, preserving the Euler-type continuity equations. We then analytically obtain the distributions of the densities and currents of the local conserved quantities which solely depend on the ratio $ξ=x/t$. The left and right moving quasiparticle excitations of the two halves form multiple segmented light-cone hydrodynamics that display ballistic transport of the conserved charge densities and currents in different degrees of freedom. Our analytical results provide a deep understanding of the quantum transport of multi-component Luttinger liquids in quantum systems with both bosonic and fermionic statistics.
description: 6+13 pages, 3 figures, a few new references were added
Additional file 1 of Imprints of independent allopolyploid formations on patterns of gene expression in two sibling yarrow species (Achillea, Asteraceae)
Creators: name: Chen, Duo
name: Yan, Peng-Cheng
name: Guo, Yan-Ping
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1: Supplementary Fig. S1. Correlation analysis of transcriptome data from different samples.
Supplementary document for Second harmonic generation microscopy with synthetic aperture and computational adaptive optics - 6773563.pdf
Creators: name: Moon, Jungho
name: Kang, Sungsam
name: Ye-Chan, Cho
name: Hong, Jin Hee
name: Shin, Dongjin
name: Gong, Su-Hyun
name: Yoon, Seokchan
name: Choi, Wonshik
Publisher: name: Optica Publishing Group
Year: 2024
Subjects: Applied Physics

description: supplementary information
Density of states for almost diagonal random matrices
Creators: name: Yevtushenko, Oleg
name: Kravtsov, Vladimir E.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: High Energy Physics - Theory (hep-th)
subject: Mathematical Physics (math-ph)
subject: Chaotic Dynamics (nlin.CD)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We study the density of states (DOS) for disordered systems whose spectral statistics can be described by a Gaussian ensemble of almost diagonal Hermitian random matrices. The matrices have independent random entries $ H_{i \geq j} $ with small off-diagonal elements: $ \ll \sim 1 $. Using the recently suggested method of a {\it virial expansion in the number of interacting energy levels} (Journ.Phys.A {\bf 36}, 8265), we calculate the leading correction to the Poissonian DOS in the cases of the Gaussian Orthogonal and Unitary Ensembles. We apply the general formula to the critical power-law banded random matrices and the unitary Moshe-Neuberger-Shapiro model and compare DOS of these models.
description: submitted to Phys. Rev. E
MOESM1 of The relative risk of second primary cancers in Switzerland: a population-based retrospective cohort study
Creators: name: Feller, Anita
name: Matthes, Katarina
name: Bordoni, Andrea
name: Bouchardy, Christine
name: Bulliard, Jean-Luc
name: Herrmann, Christian
name: Konzelmann, Isabelle
name: Maspoli, Manuela
name: Mousavi, Mohsen
name: Rohrmann, Sabine
name: Staehelin, Katharina
name: Arndt, Volker
name: K. Staehelin
name: C. Bouchardy
name: M. Mousavi
name: J. Bulliard
name: M. Maspoli
name: A. Bordoni
name: I. Konzelmann
name: R. Blanc-Moya
name: S. Rohrmann
Publisher: name: figshare
Year: 2020
Subjects: subject: Cell Biology
subject: Pharmacology
subject: Biotechnology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Marine Biology
subject: Cancer
subject: Computational Biology

description: Additional file 1: Table S1. Relative risk of synchronous primary tumour (follow-up period 0–6 month). Table S2. Median age at diagnosis and 5-year observed survival by cancer site and sex. Table S3. Relative risk of second primary cancer following cancer of the oral cavity and pharynx by type of second primary cancer and sex. Table S4. Relative risk of second primary cancer following oesophageal cancer by type of second primary cancer and sex. Table S5. Relative risk of second primary cancer following laryngeal cancer by type of second primary cancer and sex. Table S6. Relative risk of second primary cancer following lung cancer by type of second primary cancer and sex. Table S7. Relative risk of second primary cancer following Hodgkin lymphoma by type of second primary cancer and sex. Figure S1. Relative risk of second primary cancer by site of first primary cancer and sex including synchronous tumours including the first 6 month after initial diagnosis for risk calculations.
MOESM1 of Cross-sectoral rehabilitation intervention for patients with intermittent claudication versus usual care for patients in non-operative management - the CIPIC Rehab Study: study protocol for a randomised controlled trial
Creators: name: Siercke,
name: JÃ¸Rgensen, Lise
name: Missel, Malene
name: Thygesen, Lau
name: Blach, Pernille
name: Sillesen, Henrik
name: Berg, Selina
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 1. SPIRIT 2013 checklist.
Cesàro averages for Goldbach representations with summands in arithmetic progressions
Creators: name: Cantarini, Marco
name: Gambini, Alessandro
name: Zaccagnini, Alessandro
Publisher: name: arXiv
Year: 2019
Subjects: subject: Number Theory (math.NT)
subject: FOS: Mathematics

description: We consider weighted averages of the number of representations of an even integer as a sum of two prime numbers, where each summand lies in a given arithmetic progression modulo a common integer $q$. Our result is uniform in a suitable range for $q$.
Detectability of Gravitational Waves from SN 1987A
Creators: name: Santostasi, Giovanni
name: Frank, Juhan
name: Johnson, Warren
Publisher: name: arXiv
Year: 2003
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We discuss the potential for detection of gravitational waves from a rapidly spinning neutron star produced by supernova 1987A taking the parameters claimed by Middleditch et al. (2000) at face value. Asssuming that the dominant mechanism for spin down is gravitational waves emitted by a freely precessing neutron star, it is possible to constrain the wobble angle, the effective moment of inertai of the precessing crust and the crust cracking stress limit. Our analysis, suggests that, if the interpretation of the Middleditch data is correct, the compact remnant of SN 1987A may well provide a reliable and predictable source of gravitational waves well within the capability of LIGO II.
Additional file 2 of Imprints of independent allopolyploid formations on patterns of gene expression in two sibling yarrow species (Achillea, Asteraceae)
Creators: name: Chen, Duo
name: Yan, Peng-Cheng
name: Guo, Yan-Ping
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 2: Supplementary Fig. S2. Patterns of gene expression detected by RT-qPCR to verify the RNA-Seq data.
Parton Distributions in Nucleons and Nuclei
Creators: name: Ethier, Jacob J.
name: Nocera, Emanuele R.
Publisher: name: arXiv
Year: 2020
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: We review the current status of Parton Distribution Function (PDF) determinations for unpolarized and longitudinally polarized protons and for unpolarized nuclei, which are probed by high-energy hadronic scattering in perturbative Quantum Chromodynamics (QCD). We present the established theoretical framework, the experimental information, and the methodological aspects inherent to any modern PDF extraction. Furthermore, we summarize the present knowledge of PDFs and discuss their limitations in both accuracy and precision relevant to advance our understanding of QCD proton substructure and pursue our quest for precision in the Standard Model and beyond. In this respect, we highlight various achievements, discuss contemporary issues in PDF analyses, and outline future directions of progress.
description: 34 pages, 5 figures, 2 tables; invited review submitted to Annual Review of Nuclear and Particle Science, Vol.70 (2020); version accepted for publication; various references updated; improved discussion on implications for astroparticle physics
Revealing the importance of interfaces for pure spin current transport
Creators: name: Pfeiffer, Alexander
name: Reeve, Robert M.
name: Elphick, Kelvin
name: Hirohata, Atsufumi
name: Kläui, Mathias
Publisher: name: arXiv
Year: 2019
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Spin transport phenomena underpin an extensive range of spintronic effects. In particular spin transport across interfaces occurs in most device concepts, but is so far poorly understood. As interface properties strongly impact spin transport, one needs to characterize and correlate them to the fabrication method. Here we investigate pure spin current transport across interfaces and connect this with imaging of the interfaces. We study the detection of pure spin currents via the inverse spin Hall effect in Pt and the related spin current absorption by Pt in Py-Cu-Pt lateral spin valves. Depending on the fabrication process, we either find a large (inverse) spin Hall effect signal and low spin absorption by Pt or vice versa. We explain these counter-intuitive results by the fabrication induced varying quality of the Cu/Pt interfaces, which is directly revealed via a special scanning electron microscopy technique for interface imaging and correlated to the spin transport.
description: 23 pages, 4 figures
Moduli Spaces and Formal Operads
Creators: name: Guillen, F.
name: Navarro, V.
name: Pascual, P.
name: Roig, A.
Publisher: name: arXiv
Year: 2004
Subjects: subject: Algebraic Geometry (math.AG)
subject: Algebraic Topology (math.AT)
subject: Quantum Algebra (math.QA)
subject: FOS: Mathematics
subject: 14FXX; 55XX

description: Let overline{M}_{g,n} be the moduli space of stable algebraic curves of genus g with n marked points. With the operations which relate the different moduli spaces identifying marked points, the family (overline{M}_{g,n})_{g,n} is a modular operad of projective smooth Deligne-Mumford stacks, overline{M}. In this paper we prove that the modular operad of singular chains C_*(overline{M};Q) is formal; so it is weakly equivalent to the modular operad of its homology H_*(overline{M};Q). As a consequence, the "up to homotopy" algebras of these two operads are the same. To obtain this result we prove a formality theorem for operads analogous to Deligne-Griffiths-Morgan-Sullivan formality theorem, the existence of minimal models of modular operads, and a characterization of formality for operads which shows that formality is independent of the ground field.
description: 36 pages (v3: some typographical corrections)
Genetic support of a causal relationship between iron status and type 2 diabetes: a Mendelian randomization study - Supplementary material
Creators: name: Xinhui Wang
name: Fang, Xuexian
name: Wanru Zheng
name: Jiahui Zhou
name: Mingqing Xu
name: Junxia Min
name: Wang, Fudi
Publisher: name: figshare
Year: 2021
Subjects: subject: 110306 Endocrinology
subject: FOS: Clinical medicine

description: Supplementary material for Genetic support of a causal relationship between iron status and type 2 diabetes: a Mendelian randomization study.
Structure and kinematics of edge-on galaxy discs -- II. Observations of the neutral hydrogen
Creators: name: Kregel, M.
name: van der Kruit, P. C.
name: de Blok, W. J. G.
Publisher: name: arXiv
Year: 2004
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present Australia Telescope Compact Array (ATCA) and Westerbork Synthesis Radio Telescope (WSRT) HI observations of 15 edge-on spiral galaxies of intermediate to late morphological type. The global properties and the distribution and kinematics of the HI gas are analysed and discussed. We determine the rotation curves using the envelope-tracing method. For 10 spiral galaxies with a stellar disc truncation we find an average ratio of the HI radius to the truncation radius of the stellar disc of 1.1 +/- 0.2 (1 sigma). This paper has been accepted by MNRAS and is available in pdf-format at the following URL: http://www.astro.rug.nl/$\sim $vdkruit/jea3/homepage/paperII.pdf
description: Accepted for oublication in MNRAS
Determination of centrality in nuclear collisions by using hadron calorimeter
Creators: name: Kurepin, A.
name: Litvinenko, A.
name: Litvinenko, E.
Publisher: name: arXiv
Year: 2020
Subjects: subject: High Energy Physics - Experiment (hep-ex)
subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: The determination of the centrality of nuclear collision or the value of the impact parameter of heavy nuclei is of great importance for the analysis of all experimental data and comparison with theory. One method is to measure the number of spectators using a hadron calorimeter located at a small angle to the nuclear beam. It is shown that with an achievable resolution of the hadron calorimeter in energy, the accuracy of determining the impact parameter is insufficient for using the calorimeter in the MPD / NICA and CBM / FAIR projects. The error reaches 35 % at a beam energy of 2.5 GeV even for peripheral collisions. Secondary processes during the passage of spectators through the nucleus give an additional contribution to the error for central collisions and at medium centralities.
One-dimensional Kronig-Penney superlattices at the LaAlO$_3$/SrTiO$_3$ interface
Creators: name: Briggeman, Megan
name: Lee, Hyungwoo
name: Lee, Jung-Woo
name: Eom, Kitae
name: Damanet, François
name: Mansfield, Elliott
name: Li, Jianan
name: Huang, Mengchen
name: Daley, Andrew J.
name: Eom, Chang-Beom
name: Irvin, Patrick
name: Levy, Jeremy
Publisher: name: arXiv
Year: 2019
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: The paradigm of electrons interacting with a periodic lattice potential is central to solid-state physics. Semiconductor heterostructures and ultracold neutral atomic lattices capture many of the essential properties of 1D electronic systems. However, fully one-dimensional superlattices are highly challenging to fabricate in the solid state due to the inherently small length scales involved. Conductive atomic-force microscope (c-AFM) lithography has recently been demonstrated to create ballistic few-mode electron waveguides with highly quantized conductance and strongly attractive electron-electron interactions. Here we show that artificial Kronig-Penney-like superlattice potentials can be imposed on such waveguides, introducing a new superlattice spacing that can be made comparable to the mean separation between electrons. The imposed superlattice potential "fractures" the electronic subbands into a manifold of new subbands with magnetically-tunable fractional conductance (in units of $e^2/h$). The lowest $G=2e^2/h$ plateau, associated with ballistic transport of spin-singlet electron pairs, is stable against de-pairing up to the highest magnetic fields explored ($|B|=16$ T). A 1D model of the system suggests that an engineered spin-orbit interaction in the superlattice contributes to the enhanced pairing observed in the devices. These findings represent an important advance in the ability to design new families of quantum materials with emergent properties, and mark a milestone in the development of a solid-state 1D quantum simulation platform.
Additional file 3 of Imprints of independent allopolyploid formations on patterns of gene expression in two sibling yarrow species (Achillea, Asteraceae)
Creators: name: Chen, Duo
name: Yan, Peng-Cheng
name: Guo, Yan-Ping
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 3: Supplementary Table S1. Information of reads in the transcriptome data.
6C radio galaxies at z~1: The influence of radio power on the alignment effect
Creators: name: Inskip, Katherine J.
name: Best, Philip N.
name: Longair, Malcolm S.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Powerful radio galaxies often display enhanced optical/UV continuum emission and extended emission line regions, elongated and aligned with the radio jet axis. The expansion of the radio source strongly affects the gas clouds in the surrounding IGM, and the kinematic and ionization properties of the extended emission line regions display considerable variation over the lifetime of individual sources, as well as with cosmic epoch. We present the results of deep rest-frame UV and optical imaging and UV spectroscopy of high redshift 6C radio galaxies. The interdependence of the host galaxy and radio source properties are discussed, considering: (i) the relative contribution of shocks associated with the expanding radio source to the observed emission line gas kinematics, and their effect on the ionization state of the gas; (ii) the similarities and differences between the morphologies of the host galaxies and aligned emission for a range of radio source powers; and (iii) the influence of radio power on the strength of the observed alignment effect.
description: LaTeX, 6 pages, 5 figures, Elsevier Science format. To appear in "Radio galaxies: past, present & future". eds. M. Jarvis et al., Leiden, Nov 2002
Deep Learning versus Traditional Classifiers on Vietnamese Students' Feedback Corpus
Creators: name: Nguyen, Phu X. V.
name: Hong, Tham T. T.
name: Van Nguyen, Kiet
name: Nguyen, Ngan Luu-Thuy
Publisher: name: arXiv
Year: 2019
Subjects: subject: Computation and Language (cs.CL)
subject: Computers and Society (cs.CY)
subject: Machine Learning (cs.LG)
subject: FOS: Computer and information sciences

description: Student's feedback is an important source of collecting students' opinions to improve the quality of training activities. Implementing sentiment analysis into student feedback data, we can determine sentiments polarities which express all problems in the institution since changes necessary will be applied to improve the quality of teaching and learning. This study focused on machine learning and natural language processing techniques (NaiveBayes, Maximum Entropy, Long Short-Term Memory, Bi-Directional Long Short-Term Memory) on the VietnameseStudents' Feedback Corpus collected from a university. The final results were compared and evaluated to find the most effective model based on different evaluation criteria. The experimental results show that the Bi-Directional LongShort-Term Memory algorithm outperformed than three other algorithms in terms of the F1-score measurement with 92.0% on the sentiment classification task and 89.6% on the topic classification task. In addition, we developed a sentiment analysis application analyzing student feedback. The application will help the institution to recognize students' opinions about a problem and identify shortcomings that still exist. With the use of this application, the institution can propose an appropriate method to improve the quality of training activities in the future.
description: In Proceeding of the 5th NAFOSTED Conference on Information and Computer Science (NICS 2018)
Cooperativity in a trading model with memory and production
Creators: name: Donangelo, R.
name: Sneppen, K.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Trading and Market Microstructure (q-fin.TR)
subject: FOS: Physical sciences
subject: FOS: Economics and business

description: We consider in a market model the cooperative emergence of value due to a positive feedback between perception of needs and demand. Here we consider also a negative feedback from production of the traded products, and find that this cooperativity is robust, provided that the production rate is slow. Cooperativity is found to be critically linked to the ability to minimize the overall need, and thus disappears when the agents are poor, when the production rate is large or when there is little trade. We further observe that a cooperative economy may self-organize to compensate for an eventual slow production rate of certain products, so that these products are found in sizeable stocks. This differs qualitatively from an economy where cooperativity did not develop, in which case no product has a stock larger than what its bare production rate justifies. We also find that these results are robust in relation to the spatial restriction of the agents.
description: 12 pages, 7 figures
MOESM1 of Shotgun metagenomic analysis of microbial communities from the Loxahatchee nature preserve in the Florida Everglades
Creators: name: Abraham, Briana
name: Caglayan, Deniz
name: Carrillo, Natalie
name: Chapman, Matthew
name: Hagan, Claire
name: Hansen, Skye
name: Jeanty, Ralph
name: Klimczak, Alexander
name: Klingler, Marcos
name: Kutcher, Thomas
name: Levy, Sydney
name: Millard-Bruzos, Angel
name: Moore, Thomas
name: Prentice, David
name: Prescott, Matthew
name: Roehm, Richard
name: Rose, Jordan
name: Mulan Yin
name: Hyodo, Ayumi
name: Lail, Kathleen
name: Daum, Christopher
name: Clum, Alicia
name: Copeland, Alex
name: Seshadri, Rekha
name: Rio, Tijana
name: Emiley Eloe-Fadrosh
name: Benskin, Jonathan
Publisher: name: figshare
Year: 2020
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology

description: Additional file 1: Tables S1-S5. Containing metadata from sequencing, assembly information, potential contaminants, diversity tests, and soil content.
MOESM8 of A robust TDP-43 knock-in mouse model of ALS
Creators: name: Shih-Ling Huang
name: Lien-Szu Wu
name: Lee, Min
name: Chin-Wen Chang
name: Cheng, Wei-Cheng
name: Fang, Yu-Sheng
name: Yun-Ru Chen
name: Cheng, Pei-Lin
name: Che-Kun Shen
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Computational Biology

description: Additional file 8: Figure S8. Scheme of MN differentiation.
Engineered spin-orbit interactions in LaAlO$_3$/SrTiO$_3$-based 1D serpentine electron waveguides
Creators: name: Briggeman, Megan
name: Li, Jianan
name: Huang, Mengchen
name: Lee, Hyungwoo
name: Lee, Jung-Woo
name: Eom, Kitae
name: Eom, Chang-Beom
name: Irvin, Patrick
name: Levy, Jeremy
Publisher: name: arXiv
Year: 2019
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: The quest to understand, design, and synthesize new forms of quantum matter guides much of contemporary research in condensed matter physics. One-dimensional (1D) electronic systems form the basis for some of the most interesting and exotic phases of quantum matter. The variety of experimentally-accessible ballistic 1D electronic systems is highly restricted, and furthermore these systems typically have few tuning parameters other than electric and magnetic fields. However, electron waveguides formed from two-dimensional (2D) LaAlO$_3$/SrTiO$_3$ heterointerfaces exhibit remarkable 1D properties, including ballistic multi-mode transport and strong attractive electron-electron interaction, but these systems conspicuously lack strong or tunable spin-orbit interactions. Here we describe a new class of quasi-1D nanostructures, based on LaAlO$_3$/SrTiO$_3$ electron waveguides, in which a sinusoidal transverse spatial modulation is imposed. Nanowires created with this "serpentine" modulation display unique dispersive features in the subband spectra, namely (1) a significant shift ($\sim$ 7 tesla) in the spin-dependent subband minima, and (2) fractional conductance plateaus, some of which are continuously tunable with a magnetic field. The first property can be understood as an engineered spin-orbit interaction associated with the periodic acceleration of electrons as they undulate through the nanowire (ballistically), while the second property signifies the presence of enhanced electron-electron scattering in this system due to the imposed periodic structure. The ability to engineer these interactions in quantum wires contributes to the tool set of a 1D solid-state quantum simulation platform.
Additional file 4 of Imprints of independent allopolyploid formations on patterns of gene expression in two sibling yarrow species (Achillea, Asteraceae)
Creators: name: Chen, Duo
name: Yan, Peng-Cheng
name: Guo, Yan-Ping
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 4: Supplementary Table S2. Relative expression level and expression bias of homeologs in the studied Achillea allotetraploid species.
title: Значення малої Батьківщини для формування патріотичних почуттів (на прикладі творчості Василя Сухомлинського)
Creators: name: Заячківська, Надія
Publisher: name: Instytut Pedagogiki Uniwersytetu Wrocławskiego
Year: 2021

description: Nowadays there is increased attention to patriotic education as an essential component of patriot citizen formation in Ukraine. The article reveals the importance of a homeland for the formation of patriotic feelings among pupils on the example of Vasyl Sukhomlynskyi’s creative work. A prominent Ukrainian educator believed that the basis of love for the Motherland is the nature of the native land, the mother tongue, the cult of a Mother and a Father, diligence, as well as the homeland, its historical and heroic past. Patriotic feelings are formed from early childhood from the perception of the image of a homeland – streets, villages, towns, cities, native land, and close surroundings. According to V. Sukhomlynskyi, at a very young age, the child’s soul is susceptible to emotional influences; it admires what she/he sees, as well as the beauty of the land her/his grandparents and great-grandparents lived on.The effectiveness of patriotic education for teenagers and adolescents depends on how deeply the image of the homeland penetrated the younger schoolchildren’s the spiritual world. A school, a teacher, and the mother tongue are also of great importance in this process. The patriotic vision of the world be-128gins with the love of its homeland and develops into the love of the Motherland – Ukraine and all humanity.
MOESM7 of A robust TDP-43 knock-in mouse model of ALS
Creators: name: Shih-Ling Huang
name: Lien-Szu Wu
name: Lee, Min
name: Chin-Wen Chang
name: Cheng, Wei-Cheng
name: Fang, Yu-Sheng
name: Yun-Ru Chen
name: Cheng, Pei-Lin
name: Che-Kun Shen
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 7: Figure S7. Expression change of Bcl-2 and other TDP-43 target genes in the spinal cord of N390D/+ male mice in comparison to the +/+male mice.
Flat space physics from holography
Creators: name: Bousso, Raphael
Publisher: name: arXiv
Year: 2004
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We point out that aspects of quantum mechanics can be derived from the holographic principle, using only a perturbative limit of classical general relativity. In flat space, the covariant entropy bound reduces to the Bekenstein bound. The latter does not contain Newton's constant and cannot operate via gravitational backreaction. Instead, it is protected by - and in this sense, predicts - the Heisenberg uncertainty principle.
description: 11 pages, 3 figures; v2: minor corrections
The time we experience : understanding the phenomenologies of temporal passage and presentness
Creators: name: Chen, Keyu
Publisher: name: The University of St Andrews
Year: 2024
Subjects: subject: BD638.C5
subject: Time--Philosophy

description: This dissertation explores what is involved in the alleged phenomenologies of the passage of time and the present, two phenomenological data that are normally cited to support the A-theory of time. It argues that the phenomenology corresponding to the purported passage phenomenology is that of dynamic changes in things’ states, and the phenomenology corresponding to the purported presentness phenomenology is that of (only) some things and events occurring simpliciter. It claims that these illusory phenomenologies are products of the feature of our perceptual experience of having a confined temporal horizon, which includes three aspects – limited access, involuntariness, and directionality. It also argues that the illusory phenomenologies of dynamic change and things and events occurring simpliciter, despite being at odds with the B-ontology, do not lend support to the A-theory of time. Furthermore, it provides insight into why our perceptual experience has a confined temporal horizon and how the intuitive beliefs that we experience temporal passage and presentness arise from the illusory phenomenologies.
Structure and kinematics of edge-on galaxy discs -- III. The rotation curves in the gas
Creators: name: Kregel, M.
name: van der Kruit, P. C.
Publisher: name: arXiv
Year: 2004
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: A technique is introduced for deriving the gaseous rotation curves of edge-on spiral galaxies. The entire major axis position-velocity (XV) diagram is modeled with a set of rings in a least-squares sense, allowing for the effects of beam-smearing and line-of-sight projection. The feasibility of the technique is demonstrated by applying it to good quality HI XV diagrams of eight edge-on spirals. For seven additional spirals the XV diagrams are of insufficient quality, and the HI rotational velocities derived earlier using the envelope-tracing method are retained. The HI results are augmented with the optical emission line (HII) kinematics to arrive at estimates of the full rotation curves. A detailed comparison of the HI and HII kinematics shows that the discs in our sample are sufficiently transparent at the heights above the plane where we have taken our optical spectra to derive the stellar kinematics. In several of these spirals the HII is mainly confined to spiral arms and does not extend out to the edge of the HI layer, which may have caused the HII velocity profiles to be significantly narrower than those of the HI. This paper has been accepted by MNRAS and is available in pdf-format at the following URL: http://www.astro.rug.nl/$\sim $vdkruit/jea3/homepage/paperIII.pdf
description: Accepted for publication in MNRAS
The perturbative approach for the weak deflection angle
Creators: name: Jia, Junji
Publisher: name: arXiv
Year: 2020
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: Both null and timelike rays experience trajectory bending in a gravitational field. In this work, we systematically develop a perturbative method to compute the deflection angle of rays with general velocity $v$ in arbitrary static and spherically symmetric spacetimes and in equatorial plane of arbitrary static and axisymmetric spacetimes. We show that the expansion in the large closest approach $x_0$ limit depends on the asymptotic behavior of the metric functions only, and the generated integrand is always integrable, resulting in a deflection angle in a series form of either $x_0$ or $b$, the impact parameter. Using this method, the deflection angles as series of both $x_0$ and $b$ are found in Schwarzschild, Reissner-Nordström and Kerr-Newman spacetimes to 17-th, 15-th and 6-th orders respectively, for both lightrays and particles with general velocity. The effects of the impact parameter, velocity and other parameters of the spacatimes are briefly analyzed. Moreover, we show that for spacetimes whose metric functions are only asymptotically known, the deflection angle in the weak field limit can also be calculated. Furthermore, it is shown that the deflection angle in general static and spherically symmetric spacetime and equatorial plane of static and axisymmetric spacetime to the lowest non-trivial order, depends only on the impact parameter, velocity of the particle, and the effective ADM mass of the spacetime but not on other parameters such as charge or angular momentum. These deflection angles are used in an exact gravitational lensing equation and the corresponding apparent angles of the images of the source are also solved perturbatively.
description: 42 pages, 5 figures; typos and grammar corrected; references added;
A relativistic jet in the radio-quiet quasar PG1407+263
Creators: name: Blundell, Katherine
name: Beasley, Tony
name: Bicknell, Geoff
Publisher: name: arXiv
Year: 2003
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present the results of a multi-epoch radio monitoring campaign measuring the milliarcsecond structure of the jet in the radio-quiet quasar PG1407+263. This is the highest-sensitivity, highest-resolution multi-year study of a distant active galaxy. The observations are naturally explained in terms of a beamed relativistic jet, some of whose fluctuations in flux density can be ascribed to interaction with the narrow-line region of the quasar. The optical properties of PG1407+263, in particular the low equivalent widths of the emission lines, may be related to the fact that we are viewing this quasar almost pole-on, giving us a direct view into its broad-line region.
description: 4 pages, uses emulateapj5.sty; accepted by ApJ Letters
MOESM5 of A robust TDP-43 knock-in mouse model of ALS
Creators: name: Shih-Ling Huang
name: Lien-Szu Wu
name: Lee, Min
name: Chin-Wen Chang
name: Cheng, Wei-Cheng
name: Fang, Yu-Sheng
name: Yun-Ru Chen
name: Cheng, Pei-Lin
name: Che-Kun Shen
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Computational Biology

description: Additional file 5: Figure S5. Increase of astrogliosis in the spinal cord of N390D/+ male mice at late stage of pathogenesis.
K-resolver: Towards Decentralizing Encrypted DNS Resolution
Creators: name: Hoang, Nguyen Phong
name: Lin, Ivan
name: Ghavamnia, Seyedhamed
name: Polychronakis, Michalis
Publisher: name: arXiv
Year: 2020
Subjects: subject: Networking and Internet Architecture (cs.NI)
subject: Cryptography and Security (cs.CR)
subject: FOS: Computer and information sciences

description: Centralized DNS over HTTPS/TLS (DoH/DoT) resolution, which has started being deployed by major hosting providers and web browsers, has sparked controversy among Internet activists and privacy advocates due to several privacy concerns. This design decision causes the trace of all DNS resolutions to be exposed to a third-party resolver, different than the one specified by the user's access network. In this work we propose K-resolver, a DNS resolution mechanism that disperses DNS queries across multiple DoH resolvers, reducing the amount of information about a user's browsing activity exposed to each individual resolver. As a result, none of the resolvers can learn a user's entire web browsing history. We have implemented a prototype of our approach for Mozilla Firefox, and used it to evaluate the performance of web page load time compared to the default centralized DoH approach. While our K-resolver mechanism has some effect on DNS resolution time and web page load time, we show that this is mainly due to the geographical location of the selected DoH servers. When more well-provisioned anycast servers are available, our approach incurs negligible overhead while improving user privacy.
description: NDSS Workshop on Measurements, Attacks, and Defenses for the Web (MADWeb) 2020
Supernova 2002bo: inadequacy of the single parameter description
Creators: name: Benetti, S.
name: Meikle, P.
name: Stehle, M.
name: Altavilla, G.
name: Desidera, S.
name: Folatelli, G.
name: Goobar, A.
name: Mattila, S.
name: Mendez, J.
name: Navasardyan, H.
name: Pastorello, A.
name: Patat, F.
name: Riello, M.
name: Ruiz-Lapuente, P.
name: Tsvetkov, D.
name: Turatto, M.
name: Mazzali, P.
name: Hillebrandt, W.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present optical/near-infrared photometry and spectra of the type Ia SN 2002bo spanning epochs from -13 days before maximum B-band light to +102 days after. The pre-maximum optical coverage is particularly complete. In some respects, SN 2002bo behaves as a typical "Branch normal" type Ia supernova (SN Ia) at optical and IR wavelengths. We find a B-band risetime of 17.9+-0.5 days, a Dm_{15}(B) of 1.13+-0.05, and a M_B=-19.41+-0.42. However, comparison with other type Ia supernovae having similar Delta m_{15}(B) values indicates that in other respects SN 2002bo is unusual. While the optical spectra of SN 2002bo are very similar to those of SN 1984A, lower velocities and a generally more structured appearance are found in SNe 1990N, 1994D and 1998bu. For supernovae having Dm_(15)(B) > 1.2, we confirm the variation of R(SiII) (Nugent et al. 1995) with Dm_(15)(B). However, for supernovae such as SN2002bo, with lower values of Dm_(15)(B) the relation breaks down. Moreover, the evolution of R(SiII) for SN 2002bo is strikingly different from that shown by other type Ia supernovae. The velocities of SN 2002bo and 1984A derived from SII 5640A, SiII 6355A and CaII H&K lines are either much higher and/or evolve differently from those seen in other normal SNe Ia events. We suggest that the unusually low temperature, the presence of high-velocity intermediate-mass elements and the low abundance of carbon at early times indicates that burning to Si penetrated to much higher layers than in more normal type Ia supernovae. This may be indicative of a delayed-detonation explosion.
description: Accepted to MNRAS. Some near-IR photometry has been added. The paper can be retrieved also at http://web.pd.astro.it/supern/ps/sn02bo_v17_mn2.ps.gz
MOESM6 of A robust TDP-43 knock-in mouse model of ALS
Creators: name: Shih-Ling Huang
name: Lien-Szu Wu
name: Lee, Min
name: Chin-Wen Chang
name: Cheng, Wei-Cheng
name: Fang, Yu-Sheng
name: Yun-Ru Chen
name: Cheng, Pei-Lin
name: Che-Kun Shen
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Hematology
subject: Computational Biology

description: Additional file 6: Figure S6. Decreased of p62 protein level and enhanced of the proteasome activities in the spinal cord, but not the forebrain, of symptomatic N390D/+ mice.
The dark side of orange: Multiorganismic continuum dynamics within a lichen of the Atacama Desert
Creators: name: Jung, Patrick
name: Baumann, Karen
name: Emrich, Dina
name: Schermer, Michael
name: Eckhardt, Kai-Uwe
name: Jandl, Gerald
name: Leinweber, Peter
name: Harion, Felix
name: Wruck, Andreas
name: Grube, Martin
name: Büdel, Burkhard
name: Lakatos, Michael
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Plant Biology
subject: Computational Biology

description: Over the decades our understanding of lichens has shifted to the fact that they are multiorganismic, symbiotic microecosystems, with their complex interactions coming to the fore due to recent advances in microbiomics. Here, we present a mutualistic-parasitic continuum dynamics scenario between an orange lichen and a lichenicolous fungus from the Atacama Desert leading to the decay of the lichen’s photobiont and leaving behind a black lichen thallus. Based on isolation, sequencing, and ecophysiological approaches including metabolic screenings of the symbionts, we depict consequences upon infection with the lichenicolous fungus. This spans from a loss of the lichen’s photosynthetic activity and an increased roughness of its surface to an inhibition of the parietin synthesis as a shared pathway between the photobiont and the mycobiont, including a shift of secondary metabolism products. This degree of relations has rarely been documented before, although lichenicolous fungi have been studied for over 200 years, adding an additional level to the view of interactions within lichens.
Additional file 1 of Association between blood glucose levels and Glasgow Outcome Score in patients with traumatic brain injury: secondary analysis of a randomized trial
Creators: name: Yuan, Tao
name: He, Hongyu
name: Liu, Yuepeng
name: Wang, Jianwei
name: Kang, Xin
name: Fu, Guanghui
name: Xie, Fangfang
name: Li, Aimin
name: Chen, Jun
name: Wang, Wenxue
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy

description: Additional file 1: Supplementary Material. Association between blood glucose levels and Glasgow Outcome Score in patients with traumatic brain injury: Secondary analysis of a randomized trial.
Additional file 5 of Imprints of independent allopolyploid formations on patterns of gene expression in two sibling yarrow species (Achillea, Asteraceae)
Creators: name: Chen, Duo
name: Yan, Peng-Cheng
name: Guo, Yan-Ping
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 5: Supplementary Table S3. Primers used in RT-qPCR assays.
Old-growth forest versus generalist lichens: Sensitivity to prolonged desiccation stress and photosynthesis reactivation rate upon rehydration
Creators: name: Osyczka, Piotr
name: Kościelniak, Robert
name: Stanek, Małgorzata
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Plant Biology

description: Most epiphytic lichens demonstrate high specificity to a habitat type, and sensitive hygrophilous species usually find shelter only in close-to-natural forest complexes. Some of them are considered as old-growth forest and/or long ecological continuity indicators. To evaluate general links between the narrow ecological range and physiological traits, two distinct sets of model lichens, i.e., old-growth forest (Cetrelia cetrarioides (Duby) W.L. Culb. & C.F. Culb., Lobaria pulmonaria (L.) Hoffm., Menegazzia terebrata (Hoffm.) A. Massal.), and generalist (Flavoparmelia caperata (L.) Hale, Hypogymnia physodes (L.) Nyl., Parmelia sulcata Taylor) ones, were examined in terms of sensitivity to long-term desiccation stress (1-, 2-, and 3-month) and photosynthesis activation rate upon rehydration. Desiccation tolerance and response rate to rehydration are specific to a given ecological set of lichens rather than to a particular species. Noticeable delayed and prompt recovery of high photosynthetic activity of photosystem II (PSII) characterize these sets, respectively. At the same time, although a decrease in the potential quantum yield of PSII in lichen thalli with a relative water content (RWC) at the level of 25% was observed, the efficiency remained at a very high level for all species, regardless of habitat preferences. Among the examined lichens, the fluorescence emission parameters for F. caperata were the fastest toward equilibrium upon rehydration, both after a shorter and a longer period of desiccation stress. In contrast to generalist lichens, retrieving of photosynthesis after 3-month desiccation failed in old-growth forest lichens. In the long term, prolonged rainless periods and unfavorable water balance in the environment predicted in the future may have a severely limiting effect on hygrophilous lichens during growing season (also in the sense of species associations) and, at the same time, promote the development of generalists.