cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 3 of DIMPLE: deep insertion, deletion, and missense mutation libraries for exploring protein variation in evolution, disease, and biology
Creators: name: Macdonald, Christian B.
name: Nedrud, David
name: Grimes, Patrick Rockefeller
name: Trinidad, Donovan
name: Fraser, James S.
name: Coyote-Maestas, Willow
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 3: Figure S1. DIMPLE GUI and protocol. Figure S2. Design of oligos ordered in oligo library synthesis pools in more detail. Figure S3. Kir2.1 Positional coverage. Figure S4. Additional library positional coverage. Figure S5. Additional library quality measures. Figure S6. Gating strategy for sorting Kir2.1 DIMPLE libraries based on surface expression. Figure S7. Replicates within and outside of study have high agreement. Figure S8. Indel Enrich2 score distributions. Figure S9. Distribution of correlations between deletion, insertions, and substitutions within a 10-residue sliding window. Figure S10. Kir2.1 standard errors are evenly distributed. Figure S11. Score distributions of structured vs. unstructured regions. Figure S12. Impact of varying insertion length on M1 and slide helix. Figure S13. Score distributions of beta sheets vs. alpha helices across different mutation types. Figure S14. Length of deletion errors within Kir2.1 OLS subpools.
Roman copper-alloy instrument
Creators: name: Hamerow, Helena
Publisher: name: University of Oxford
Year: 2021
Subjects: Archaeology

description: Bronze surgical instrument, length 17.5cm. of cast and beaten bronze; lower end of handle flat and thin with blunt edges and sharpened rounded point; this flat blade angles in to a thin tapering rectangular sectioned stem, bent over at right-angles at the point for 2.2cm, and terminating there in a swollen olive-shaped point.
Roman copper-alloy instrument
Creators: name: Hamerow, Helena
Publisher: name: University of Oxford
Year: 2021
Subjects: Archaeology

description: Bronze surgical instrument, length 12cm, probably a ligula or specilla. long shaft with pointed end, widening and thickening toward the other end, before thinning to join a small flat circular lobe, at an angle to the stem. This lobe is very solid with flat underside and curved upper, and the whole appears cast in one. Stem champfered.
sj-pdf-1-msj-10.1177_13524585211002097 – Supplemental material for Cognitive impairment, the central vein sign, and paramagnetic rim lesions in RIS
Creators: name: Jiwon Oh
name: Suradech Suthiphosuwan
name: Sati, Pascal
name: Absinta, Martina
name: Dewey, Blake
name: Guenette, Melanie
name: Selchen, Daniel
name: Bharatha, Aditya
name: Donaldson, Emily
name: Reich, Daniel S
name: Feinstein, Anthony
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 110904 Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: 111702 Aged Health Care
subject: FOS: Health sciences

description: Supplemental material, sj-pdf-1-msj-10.1177_13524585211002097 for Cognitive impairment, the central vein sign, and paramagnetic rim lesions in RIS by Jiwon Oh, Suradech Suthiphosuwan, Pascal Sati, Martina Absinta, Blake Dewey, Melanie Guenette, Daniel Selchen, Aditya Bharatha, Emily Donaldson, Daniel S Reich and Anthony Feinstein in Multiple Sclerosis Journal
Archives and Auschwitz
Creators: name: Atkey, Susan
Publisher: name: Humanities Commons
Year: 2021
Subjects: subject: Auschwitz (Concentration camp)
subject: Birkenau (Concentration camp)
subject: Jewish Holocaust (1939-1945)
subject: Archives
subject: Crowdsourcing
subject: Holocaust survivors

description: In this presentation, I look at the Archives of the Auschwitz-Birkenau State Museum and beyond. We will look at networked digital Holocaust archives and participatory practices such as crowdsourcing and the potentials and limitations of the digital for the future of Holocaust research. Digitizing archival collections allows researchers and survivors to access the materials across different archives and locations, and provides opportunities to link and connect historical data.
Additional file 1 of Traumatic events and posttraumatic stress symptoms in a treatment-seeking sample of Ukrainian children during the war
Creators: name: Pfeiffer, Elisa
name: Garbade, Maike
name: Sachser, Cedric
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Science Policy
subject: Mental Health

description: Additional file 1: Table S1. Differences in trauma history, PTSD and CPTSD sum scores between patients who were still in Ukraine and patients who had already left Ukraine at the measurement time point. Table S2. Differences in trauma history, PTSD and CPTSD sum scores between male and female patients at the measurement time point.
Archives and Auschwitz
Creators: name: Atkey, Susan
Publisher: name: unknown
Year: 2021
Subjects: subject: Birkenau (Concentration camp)
subject: Auschwitz (Concentration camp)
subject: Archives
subject: Holocaust survivors
subject: Jewish Holocaust (1939-1945)
subject: Crowdsourcing

description: In this presentation, I look at the Archives of the Auschwitz-Birkenau State Museum and beyond. We will look at networked digital Holocaust archives and participatory practices such as crowdsourcing and the potentials and limitations of the digital for the future of Holocaust research. Digitizing archival collections allows researchers and survivors to access the materials across different archives and locations, and provides opportunities to link and connect historical data.
Notes from: Becoming a Reflective Researcher
Creators: name: Sewell, Claire
Publisher: name: unknown
Year: 2023

description: 'Reflective practice' is a phrase that often makes people worry but it is just a formal term for something we all do every day. We all have an internal monologue which helps us to process our experiences, both positive and negative. Researchers and students are increasingly being asked to apply reflection to their studies, something emphasised by the key graduate outcomes of the University. But what does this actually mean? How can you use an abstract concept like reflection in your work? This session answers these questions and more. Learn about how you can use reflection to think critically about your response to information, analyse the opinions of others and bring these insights into your writing. You will also be shown how this process can help you in your everyday life – from interviews and coping with feedback through to helping you settle your thoughts at the end of a busy day.
Notes from: Becoming a Reflective Researcher
Creators: name: Sewell, Claire
Publisher: name: Humanities Commons
Year: 2023

description: ‘Reflective practice’ is a phrase that often makes people worry but it is just a formal term for something we all do every day. We all have an internal monologue which helps us to process our experiences, both positive and negative. Researchers and students are increasingly being asked to apply reflection to their studies, something emphasised by the key graduate outcomes of the University. But what does this actually mean? How can you use an abstract concept like reflection in your work? This session answers these questions and more. Learn about how you can use reflection to think critically about your response to information, analyse the opinions of others and bring these insights into your writing. You will also be shown how this process can help you in your everyday life – from interviews and coping with feedback through to helping you settle your thoughts at the end of a busy day.
sj-pdf-3-imr-10.1177_0300060521999531 - Supplemental material for Robert’s uterus with delayed diagnosis and potential consequences: a case report
Creators: name: Zhang, Jing
name: Zhou, Weili
name: Tang, Ying
name: Tan, Shiqiao
name: Qiao, Lin
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: Health and Community Services
subject: Cardiology
subject: Dentistry not elsewhere classified
subject: Emergency Medicine
subject: Endocrinology
subject: Geriatrics and Gerontology
subject: Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: Nursing not elsewhere classified
subject: Nutrition and Dietetics not elsewhere classified
subject: Oncology and Carcinogenesis not elsewhere classified
subject: Orthopaedics
subject: Sports Medicine
subject: Otorhinolaryngology
subject: Aged Health Care
subject: Paediatrics
subject: Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: Psychology not elsewhere classified
subject: Psychiatry (incl. Psychotherapy)
subject: Public Health and Health Services not elsewhere classified
subject: Respiratory Diseases
subject: Sociological Methodology and Research Methods
subject: Surgery

description: Supplemental material, sj-pdf-3-imr-10.1177_0300060521999531 for Robert’s uterus with delayed diagnosis and potential consequences: a case report by Jing Zhang, Weili Zhou, Ying Tang, Shiqiao Tan and Lin Qiao in Journal of International Medical Research
Long-term impact of aerodigestive symptoms on adults with oesophageal cancer: A qualitative study
Creators: name: Gillman, Anna
name: Hayes, Michelle
name: Walsh, Irene
name: Walshe, Margaret
name: Reynolds, John V.
name: Regan, Julie
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy

description: The impact of long-term aerodigestive symptoms following oesophageal cancer surgery is still not well understood. This study aimed to qualitatively understand the long-term impact of aerodigestive symptoms on quality of life in adults post-oesophagectomy. Participants who received curative transhiatal/transthoracic surgery for oesophageal cancer in Ireland’s National Oesophageal Cancer Centre were invited to attend semi-structured interviews. Surgery had to be completed at least 12 months prior. Reflexive thematic analysis was conducted. Forty participants were interviewed individually face-to-face. Four key themes were identified: (a) isolation, reflecting the reported solitude experienced by oesophageal cancer survivors when attempting to manage their ongoing aerodigestive symptoms; (b) fear, including fear of choking and fear that dysphagia symptoms may indicate recurrence of oesophageal cancer; (c) altered work capacity, caused by ongoing aerodigestive symptoms; and (d) avoidance of social situations involving food, due to the pain, discomfort, and embarrassment caused by these symptoms. Oesophageal cancer treatment can be lifesaving, however, such medical interventions can result in distressing physiological aerodigestive symptoms throughout survivorship, which can significantly impact quality of life. Our findings indicate a need for greater community support to manage aerodigestive symptoms and reduce the impact these have on quality of life.
Supplemental material for this article is available online.
Creators: name: Harshavardhan Reddy Kummitha
name: Kolloju, Naveen
name: Chittoor, Prakash
name: Madepalli, Venkatesh
Publisher: name: SAGE Journals
Year: 2021
Subjects: Education

description: Supplemental Material for Coronavirus Disease 2019 and Its Effect on Teaching and Learning Process in the Higher Educational Institutions by Harshavardhan Reddy Kummitha, Naveen Kolloju, Prakash Chittoor and Venkatesh Madepalli, in Higher Education for the Future
Additional file 1 of Predicting the spatial variation in cost-efficiency for agricultural greenhouse gas mitigation programs in the U.S.
Creators: name: Cameron-Harp, Micah V.
name: Hendricks, Nathan P.
name: Potter, Nicholas A.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Ecology
subject: FOS: Biological sciences
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1. Description of file—Figure S1. Change in share of cropland acreage employing cover-cropping between 2012 and 2017. Counties with missing data in either 2012 or 2017 are depicted in dark grey. Figure S2. Change in share of cropland acreage using no-till between 2012 and 2017. Counties with missing data in either 2012 or 2017 are depicted in dark grey. Figure S3. Change in share of cropland acreage using conservation tillage between 2012 and 2017. Figure S4. Change in share of cropland acreage using either no-till or conservation tillage between 2012 and 2017. Figure S5. Average carbon sequestration for COMET Planner scenarios involving a reduction in tillage intensity (CPS numbers 329 and 345). Figure S.6. Average carbon sequestration for COMET Planner scenarios involving cover-cropping (CPS number 340). Figure S7. Variance estimates for random forest predictions of the change in acreage using tillage reduction practices between 2017 and 2022. Figure S8. Variance estimates for random forest predictions of the change in acreage cover cropping between 2017 and 2022. Figure S9. Predicted rate of change in acres using tillage reduction practices between 2017 and 2022. Figure S10. Predicted rate of change in acres using cover cropping practices between 2017 and 2022. Figure S11. Variable importance plot for the random forest predicting the county-level rate of change in acreage using a reduced tillage practice. Figure S12. Variable importance plot for the random forest predicting the county-level rate of change in acreage using cover crops. Figure S13. Average carbon sequestration due to tillage reduction practices by tercile. Values are the average of CPS 329 and 345 practices from COMET Planner. Figure S14. Predicted rate of adoption between 2017 and 2022 for tillage reduction practices by category. Rates are divided into those below zero, between 0 and median positive predicted rate, and values above the median positive predicted rate.
How to Give a Terrible Presentation
Creators: name: Sewell, Claire
Publisher: name: Humanities Commons
Year: 2023

description: Many people are wary of giving presentations but they are a fact of academic life. Being able to clearly present your research to an interested audience helps with public engagement and offers the chance to make an impact. This session shares the ten most common mistakes people make when designing and delivering a presentation and offers some tips and tricks to overcome them.
sj-pdf-1-eus-10.1177_00131245211001911 – Supplemental material for Reform at the Intersection of Loose Coupling and Pedagogic Modalities: The Case of Hong Kong
Creators: name: Lee, Trevor Tsz-Lok
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: Education
subject: 120599 Urban and Regional Planning not elsewhere classified
subject: FOS: Social and economic geography

description: Supplemental material, sj-pdf-1-eus-10.1177_00131245211001911 for Reform at the Intersection of Loose Coupling and Pedagogic Modalities: The Case of Hong Kong by Trevor Tsz-lok Lee in Education and Urban Society
How to Give a Terrible Presentation
Creators: name: Sewell, Claire
Publisher: name: unknown
Year: 2023

description: Many people are wary of giving presentations but they are a fact of academic life. Being able to clearly present your research to an interested audience helps with public engagement and offers the chance to make an impact. This session shares the ten most common mistakes people make when designing and delivering a presentation and offers some tips and tricks to overcome them.
Two copper-alloy chatelaine pendants
Creators: name: Hamerow, Helena
Publisher: name: University of Oxford
Year: 2021
Subjects: Archaeology

description: Both Gatty Slips: Small brass instrument, found at Gilton Town, Kent. Labelled \Ash 1762\". Formerly in the Faussett coll. Vide Inven. Sep. pl. 12 fig 6 [image]"M 6027: Bronze chatelaine pendant, length 3.5cm. At top a pierced roundel, with its original ring now missing, set at right-angles to plane of base. Round sectioned shaft terminating in triple grooves, below which is spread and flattened; terminates in double-sided hammered with domed top.M 6028: The mate of the above, but with attachment loop and ring both missing.The Gatty Slip reference to Faussett 1856 pl. 12.6 is probably incorrect, or it is likely that these pendants are similar to those found in the illustration. The label \Ash 1762\" may also be incorrect as no graves excavated that year (graves 50-71) produced copper-alloy chatelaine pendants. Those graves that did produce pendants were: 27 or 41 (excavated in 1760) and 76 81 or 87 (excavated in 1763). – D.H. & B.B."
Alien Heart: The Life and Work of Margaret Laurence by Lyall Powers; Writing Grief: Margaret Laurence and the Work of Mourning by Christian Riegel
Creators: name: Bridgeman, J.M.
Publisher: name: Prairie Fire Press, Inc.
Year: 2012
Subjects: non-fiction; alien heart; lyall powers; christian riegel; writing grief; margaret laurence

description: Prairie Fire Review of Books, Vol 12, No 1 (2012)
Notes from: How to Give a Terrible Presentation
Creators: name: Sewell, Claire
Publisher: name: Humanities Commons
Year: 2023
Subjects: subject: Business presentations

description: Many people are wary of giving presentations but they are a fact of academic life. Being able to clearly present your research to an interested audience helps with public engagement and offers the chance to make an impact. This session shares the ten most common mistakes people make when designing and delivering a presentation and offers some tips and tricks to overcome them.
Additional file 2 of Calcium signaling positively regulates cellulase translation and secretion in a Clr-2-overexpressing, catabolically derepressed strain of Penicillium funiculosum
Creators: name: Randhawa, Anmoldeep
name: A. Ogunyewo, Olusola
name: Jawed, Kamran
name: Yazdani, Syed Shams
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 2: Figure S1. Over-expression of ctf1a in P. funiculosum NCIM1228. Figure S2. Over-expression of ctf1b and clr-2 in P. funiculosum NCIM1228. Figure S3. Total cellulase activity of over-expression transformants. Figure S4. Ctf1a and Ctf1b are repressors of cutinase under cellulosic conditions. Figure S5. Clr-2 becomes non-functional without its fungal TF_MHR domain. Figure S6. Total cellulase activity of ssp1 over-expression transformants. Table S1. List of strains used in the study. Table S2. List of plasmids used in the study. Table S3. List of primers used in the study.
Notes from: How to Give a Terrible Presentation
Creators: name: Sewell, Claire
Publisher: name: unknown
Year: 2023
Subjects: subject: Business presentations

description: Many people are wary of giving presentations but they are a fact of academic life. Being able to clearly present your research to an interested audience helps with public engagement and offers the chance to make an impact. This session shares the ten most common mistakes people make when designing and delivering a presentation and offers some tips and tricks to overcome them.
Three rock crystal beads
Creators: name: Hamerow, Helena
Publisher: name: University of Oxford
Year: 2021
Subjects: Archaeology

description: Gatty slip: 3 crystal beads, probably from Gilton3 crystal beads. 1 flattened barrel shape, probably imitating an amethyst drop, length 2.3cm. Rather battered, pierced from either end. 2 oblate spheroids, diams. 2,1 and 2.3 cm, somewhat battered.Mayer card says Gilton, cf. Inv. Sep. pl. v, unnumbered string. But there is no crystal bead like the long one in MS Diary II, p. 54, and the round ones look smaller (one already accounted for anyway). Sibertswold has large white 'glass' beads from graves 30 and 31.SCH had speculated that these three beads may be the beads described as \large white glass beads\" in Sibertswold graves 30 and 31. However
sj-docx-1-smo-10.1177_20503121211000919 – Supplemental material for Psychological impact of COVID-19 on health workers in Ghana: A multicentre, cross-sectional study
Creators: name: Ofori, Anthony Amanfo
name: Osarfo, Joseph
name: Evans Kofi Agbeno
name: Manu, Dominic Owusu
name: Amoah, Elsie
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: Cardiology
subject: 110599 Dentistry not elsewhere classified
subject: FOS: Clinical medicine
subject: 110305 Emergency Medicine
subject: 110306 Endocrinology
subject: 110308 Geriatrics and Gerontology
subject: 110904 Neurology and Neuromuscular Diseases
subject: 111099 Nursing not elsewhere classified
subject: 111199 Nutrition and Dietetics not elsewhere classified
subject: 111299 Oncology and Carcinogenesis not elsewhere classified
subject: 110314 Orthopaedics
subject: 110604 Sports Medicine
subject: 110315 Otorhinolaryngology
subject: 111702 Aged Health Care
subject: 111403 Paediatrics
subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: 110319 Psychiatry (incl. Psychotherapy)
subject: 111799 Public Health and Health Services not elsewhere classified
subject: 110203 Respiratory Diseases
subject: 160807 Sociological Methodology and Research Methods
subject: FOS: Sociology
subject: 110323 Surgery
subject: 70706 Veterinary Medicine
subject: FOS: Veterinary sciences

description: Supplemental material, sj-docx-1-smo-10.1177_20503121211000919 for Psychological impact of COVID-19 on health workers in Ghana: A multicentre, cross-sectional study by Anthony Amanfo Ofori, Joseph Osarfo, Evans Kofi Agbeno, Dominic Owusu Manu and Elsie Amoah in SAGE Open Medicine
Notes from: Creating an Effective Conference Poster
Creators: name: Sewell, Claire
Publisher: name: unknown
Year: 2023

description: Research posters are a great way to communicate your project to an interested audience, but they are not just an excuse to cram an entire article onto a single sheet of paper! This session will cover what it takes to design and present a research poster including what to include, accessibility concerns, using illustrations to make an impact and presenting both in-person and online.
Notes from: Creating an Effective Conference Poster
Creators: name: Sewell, Claire
Publisher: name: Humanities Commons
Year: 2023

description: Research posters are a great way to communicate your project to an interested audience, but they are not just an excuse to cram an entire article onto a single sheet of paper! This session will cover what it takes to design and present a research poster including what to include, accessibility concerns, using illustrations to make an impact and presenting both in-person and online.
Parts of a white-metal gilt sword grip and scabbard mouthpiece
Creators: name: Hamerow, Helena
Publisher: name: University of Oxford
Year: 2021
Subjects: Archaeology

description: Silver-gilt sword pommel, length 4cm, still attached to top of iron tang and base plate of upper guard. Pommel rather high with indented curved ends. Parcel gilt. Broad front and back faces plain silver, but chased, tooled and gilded grooves along lower edge. Gilded vertical grooves near ends. Top corroded and no decoration visible. Narrow ends gilded, but raised tongue plain silver with nielloed triangles and runic symbols - single row triangles around edges, double row at base. At one end of pommel were 3 rivets in special seatings, at other only two with space between for missing ring-attachment. Slight marking on runic symbol where ring has rubbed. Upper plate of guard missing, and pommel can be seen hollow, with sort of iron(?) washer to secure tang. Lower plate usual dished type, length 6cm, with 3 rivet-holes, large at ends and two smaller ones where rivets held two plates and pommel together. Impress of handle 2.8 x 1.6 cm. One domed rivet head fromt his guard survives separately.Scabbard mouthpiece, silver-gilt, length 5.5cm, max. width 9mm internally; 2.3cm deep. Broken in many pieces. Made of thick cast (?) metal, and decorated with recessed gilded grooves and 6 bands with nielloed triangles in single or double lines. At front or back centre is a broken loop for a string. Pommel corroded badly, but not much sign of wear.Sandpit whence Faussett and Rolfe had previously taken specimens.
Iron shield boss with copper-alloy flange rivet(s); wood remains
Creators: name: Hamerow, Helena
Publisher: name: University of Oxford
Year: 2021
Subjects: Archaeology

description: Shield-boss, only just over half of it survives. Height 8.3cm, diam 15.5cm. Carinated boss with stud on top, and ridge carination below convex dome, and above nearly vertical waist and sloping flange. Whole boss badly corroded and covered in sand: one detectable rivet has bronze shank and whole section of shield-board, and bronze stud head just visible. The section of wood is about 7mm thick and the grain appears to go one way - i.e. board is a solid piece of wood and not laminated.
Towards linking molecular interaction data to literature on Europe PMC
Creators: name: Aravind Venkatesan
name: Senay Kafkas
name: Porras, Pablo
name: Orchard, Sandra
name: McEntyre, Johanna
Publisher: name: F1000Research
Year: 2017

description: Curation is a high-precision task that is essential to both construct and keep biomolecular databases updated. Manual curation is labor-intensive, considering the tremendous growth in biomedical literature. There is an urgent need to support the curation process computationally to make the process more scalable. To this end, text mining offers a means to identify and extract statements from scientific texts that describe various biological entities and associations between them. Furthermore, these text-mined annotations when represented in machine readable format can be used to automatically link the annotations in publications to the related biomolecular databases providing a clear provenance for curators.

Here, we present SciLite [1], an annotation platform developed as part of the Europe PMC literature database [2] that exposes text-mined outputs to anyone reading content on the website. In the context of curation, this platform provides a mechanism to make deep links between the literature and data for clear provenance of curatorial statements. We will demonstrate how SciLite displays molecular interactions identified via both text mining and manual curation. Molecular interactions in SciLite currently covers, 100 manually curated interactions from IntAct [3] and 1364445 text mined annotations from the open access full text articles. We will show how linking between curated databases and the source - research articles - can be achieved. We also plan to provide links from the IntAct database interface to the molecular interaction annotations in SciLite.

References:
1. Venkatesan A, Kim JH, Talo F et al. SciLite: a platform for displaying text-mined
annotations as a means to link research articles with biological data [version 1;
referees: 1 approved with reservations]. Wellcome Open Res 2016, 1:25.
2. Europe PMC Consortium. Europe PMC: a full-text literature database for the life
sciences and platform for innovation. Nucleic Acids Res. 2015 Jan;43(Database
issue).
3. Orchard S, Ammari M, Aranda B et al. The MIntAct project--IntAct as a common
curation platform for 11 molecular interaction databases. Nucleic Acids Res. 2014
Jan;42(Database issue).
Electrochemical deposition of coloured Ni/Cu2O bilayer films on large area plastic substrates for decorative applications
Creators: name: Can, Suleyman
name: Colak, Alime
name: Balci, Huseyin
name: Kuru, Cihan
Publisher: name: Taylor & Francis
Year: 2024
Subjects: subject: Biophysics
subject: Physical Sciences not elsewhere classified
subject: Cell Biology
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified

description: In this study, coloured Ni/Cu2O bilayer films were electrochemically deposited on large area automobile plastic parts (7 × 13 cm) for decorative applications. Such coatings may become an alternative to ubiquitously used Cr coatings for plastics. Purple, dark cyan and gold colours with good homogeneity and high brightness could be produced by tuning the deposition time of the Cu2O layer. Colouration of the bilayer film can be ascribed to interference of light through the metal/dielectric layer, where the thickness of the dielectric layer controls the wavelength of the reflected light. Cu2O film has a compact structure and low roughness, which is essential to obtain uniform colours. Moreover, the Ni/Cu2O bilayer exhibits good adhesion behaviour, environmental stability and enhanced corrosion resistance. This process is industrially viable and enables the large scale production of such decorative coatings.
Iron shield boss with wood and leather remains
Creators: name: Hamerow, Helena
Publisher: name: University of Oxford
Year: 2021
Subjects: Archaeology

description: Fragmentary boss, in many pieces and incomplete. Height about 7.8cm, diam about 17.8cm (7 inches). Carinated boss with convex dome, disc stud on top, slight ridge carination above nearly vertical waist and sloping flange - flange width 2.8cm. Leather and wood remains under flange. Boss badly corroded and covered with sand accretion. Gilton? Probably not Faussett.
Magnetic nanocomposite of maize offal biomass for effective sequestration of Congo red and methyl orange dyes from contaminated water: modeling, kinetics and reusability
Creators: name: Tariq, Muhammad Salman
name: Imran, Muhammad
name: Din, Salah Ud
name: Murtaza, Behzad
name: Naeem, Muhammad Asif
name: Amjad, Muhammad
name: Shah, Noor Samad
name: Khalid, Muhammad Shafique
name: Abdel-Maksoud, Mostafa A.
name: Alfuraydi, Akram A.
name: AbdElgawad, Hamada
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Biophysics
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Infectious Diseases
subject: FOS: Health sciences

description: The current study aims to use a facile and novel method to remove Congo red (CR) and Methyl Orange (MO) dyes from contaminated water with Maize offal biomass (MOB) and its nanocomposite with magnetic nanoparticles (MOB/MNPs). The MOB and MOB/MNPs were characterized with Fourier-transform infrared (FTIR), scanning electron microscopy (SEM), BET, XRD and point of zero charge (pHPZC). The influence of initial CR and MO levels (20–320 mg/L), adsorbent dosage (1-3 g/L), pH (3-9), co-exiting ions, temperature (25–45 °C) and time (15–180 min) was estimated. The findings demonstrated that MOB/MNPs exhibited excellent adsorption of 114.75 and 29.0 mg/g for CR and MO dyes, respectively while MOB exhibited 81.35 and 23.02 mg/g adsorption for CR and MO dyes, respectively at optimum pH-5, and dose 2 g/L. Initially, there was rapid dye removal which slowed down until equilibrium was reached. The interfering/competing ions in contaminated water and elevated temperature favored the dyes sequestration. The MOB/MNPs exhibited tremendous reusability and stability. The dyes adsorption was spontaneous, and exothermic with enhanced randomness. The adsorption effects were well explained with Freundlich model, pseudo second order and Elovich models. It is concluded that MOB/MNPs showed excellent, eco-friendly, and cost-effective potential to decontaminate the water. Nanocomposite of Maize offal biomass demonstrated higher dyes removal.FTIR, SEM, BET, XRD and pHPZC provided vital evidence for dyes adsorption.MOB/MNPs displayed excellent stability and reusability for dyes adsorption.Groundwater samples exposed a higher dyes removal.Results were validated with equilibrium and kinetic adsorption models. Nanocomposite of Maize offal biomass demonstrated higher dyes removal. FTIR, SEM, BET, XRD and pHPZC provided vital evidence for dyes adsorption. MOB/MNPs displayed excellent stability and reusability for dyes adsorption. Groundwater samples exposed a higher dyes removal. Results were validated with equilibrium and kinetic adsorption models.
Iron shield boss
Creators: name: Hamerow, Helena
Publisher: name: University of Oxford
Year: 2021
Subjects: Archaeology

description: Shield-boss, height 6.5cm, diam. 15.2cm. Carinated boss with convex dome (stud or spike broken away from top) above slight carination above sloping waist and flange. Width of flange 1.8cm. Boss broken and part missing but 3 rivets survive, indicating 5 originally, disc-headed. Badly corroded and some trace of sandy accretion.
sj-pdf-8-imr-10.1177_0300060521996912 - Supplemental material for Endoscopic transpapillary gallbladder drainage for management of acute cholecystitis with coagulopathy
Creators: name: Sun, Xiaoping
name: Liu, Yiting
name: Hu, Qing
name: Zhao, Xuyang
name: Li, Xingjie
name: Wang, Zhiping
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: Health and Community Services
subject: Cardiology
subject: Dentistry not elsewhere classified
subject: Emergency Medicine
subject: Endocrinology
subject: Geriatrics and Gerontology
subject: Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: Nursing not elsewhere classified
subject: Nutrition and Dietetics not elsewhere classified
subject: Oncology and Carcinogenesis not elsewhere classified
subject: Orthopaedics
subject: Sports Medicine
subject: Otorhinolaryngology
subject: Aged Health Care
subject: Paediatrics
subject: Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: Psychology not elsewhere classified
subject: Psychiatry (incl. Psychotherapy)
subject: Public Health and Health Services not elsewhere classified
subject: Respiratory Diseases
subject: Sociological Methodology and Research Methods
subject: Surgery

description: Supplemental material, sj-pdf-8-imr-10.1177_0300060521996912 for Endoscopic transpapillary gallbladder drainage for management of acute cholecystitis with coagulopathy by Xiaoping Sun, Yiting Liu, Qing Hu, Xuyang Zhao, Xingjie Li and Zhiping Wang in Journal of International Medical Research
Particle and heavy metal accumulation by two plant species in a coal mining area of Odisha, India
Creators: name: Panda, Soumya Sankalpa
name: Sahu, Chandan
name: Basti, Sradhanjali
name: Sahu, Sanjat Kumar
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Biophysics
subject: Cell Biology
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Developmental Biology

description: Mining activities lead to severe particulate matter (PM) pollution that consequently has a detrimental effect on ecosystem. A study was therefore conducted in a coal mining area of Odisha, India with an objective to assess the particulate matter pollution on the basis of differential aerodynamic size (PM10 and PM2.5) of the particles, the metallic (Zn and Fe) composition, and also to evaluate their nature of deposition on two identified plant species. The results suggest a significant variation in particle and heavy metal fractions in the ambient air of different sites (p < 0.05). Fe dominated the finer particle (PM2.5) fraction while Zn dominated the coarser counterpart (PM10) in the ambient air. When evaluated for the particle and heavy metal deposition on leaf surface, Shorea robusta performed better in trapping the coarser particles (PM10) while Holarrhena floribunda was found to be an efficient scrubber of the finer particles (PM2.5). Fe deposition on surface of leaves was comparatively higher than Zn irrespective of plant species or size fractions. Therefore, it is concluded that both S. robusta and H. floribunda should be planted in a schematic manner to tackle the particulate pollution in coal mining areas.
sj-pdf-1-pac-10.1177_1834490921993291 - Supplemental material for Exploring Chinese people’s attitudes towards “going through the backdoor”
Creators: name: Tulips Yiwen Wang
name: Bernardo, Allan B. I.
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology

description: Supplemental material, sj-pdf-1-pac-10.1177_1834490921993291 for Exploring Chinese people’s attitudes towards “going through the backdoor” by Tulips Yiwen Wang and Allan B. I. Bernardo in Journal of Pacific Rim Psychology
Copper-alloy chatelaine ?distributor
Creators: name: Hamerow, Helena
Publisher: name: University of Oxford
Year: 2021
Subjects: Archaeology

description: Gatty Slip: Small brass instrument, found at Gilton Town, Kent. Formerly with the Faussett coll. Vide Inven. Sep. pl. 12 fig. 6 [image]Bronze chatelaine ornament, length 1.8cm. Openwork trefoil of cast metal - probably used as a distributor for the iron links & iron chains which made up the rest of the chatelaine in addition to the bronze dingle-dangles. Has iron stains in and around the holes.From Graves 41, 76, 81 or 87. – B.B.SCH card incorrectly attributes the accession number M 6021 to this object; the Gatty Slip indicates that it should be M 6024. – D.H.
sj-pdf-1-jpc-10.1177_21501327211000221 – Supplemental material for The Effect of Health Literacy on a Brief Intervention to Improve Advance Directive Completion: A Randomized Controlled Study
Creators: name: Barker, Paige C.
name: Holland, Neal P.
name: Shore, Oliver
name: Cook, Robert L.
name: Zhang, Yang
name: Warring, Carrie D.
name: Hagen, Melanie G.
Publisher: name: SAGE Journals
Year: 2021
Subjects: Health and Community Services
Public Health and Health Services not elsewhere classified

description: Supplemental material, sj-pdf-1-jpc-10.1177_21501327211000221 for The Effect of Health Literacy on a Brief Intervention to Improve Advance Directive Completion: A Randomized Controlled Study by Paige C. Barker, Neal P. Holland, Oliver Shore, Robert L. Cook, Yang Zhang, Carrie D. Warring and Melanie G. Hagen in Journal of Primary Care & Community Health
Iron shield boss with wood and leather remains
Creators: name: Hamerow, Helena
Publisher: name: University of Oxford
Year: 2021
Subjects: Archaeology

description: Shield-boss, height 9cm, diam. 15cm. Rather tall boss with convex dome, topped by small button, slight carination above sloping waist, and narrow flange, width 1cm. Flange has only four rivets, and has wood and leather remains beneath. Badly corroded and covered with sandy incrustations.
Copper-alloy chatelaine pendant
Creators: name: Hamerow, Helena
Publisher: name: University of Oxford
Year: 2021
Subjects: Archaeology

description: Gatty Slip: Small brass instrument, found at Gilton Town, Kent. Formerly in the Faussett coll. Vide Inven. Sep. pl. 12, fig. 6 [image]Bronze spear-shaped chatelaine pendant, ring now lost, length 2.9cm. Tapering lozenge-shaped blade with convex striking to point, with a broadest point a ring and dot on either face. At top the flattened blade gives way to round wire, bent into loop and end brought back and twisted round spirally at base of loop. eg. similar in constructions to nos. M 6030, M 6211, M 6212 and presumably from same set.The pendant is likely to have come from one of the graves that produced copper-alloy chatelaine pendants: 27, 41, 76, 81 or 87. – D.H. & B.B.
sj-pdf-2-tar-10.1177_1753466621998245 – Supplemental material for Advanced therapeutic inhalation aerosols of a Nrf2 activator and RhoA/Rho kinase (ROCK) inhibitor for targeted pulmonary drug delivery in pulmonary hypertension: design, characterization, aerosolization, in vitro 2D/3D human lung cell cultures, and in vivo efficacy
Creators: name: Acosta, Maria F.
name: Muralidharan, Priya
name: Grijalva, Carissa L.
name: Abrahamson, Michael D.
name: Hayes, Don
name: Fineman, Jeffrey R.
name: Black, Stephen M.
name: Mansour, Heidi M.
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 111702 Aged Health Care
subject: FOS: Health sciences
subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: FOS: Clinical medicine
subject: 110203 Respiratory Diseases

description: Supplemental material, sj-pdf-2-tar-10.1177_1753466621998245 for Advanced therapeutic inhalation aerosols of a Nrf2 activator and RhoA/Rho kinase (ROCK) inhibitor for targeted pulmonary drug delivery in pulmonary hypertension: design, characterization, aerosolization, in vitro 2D/3D human lung cell cultures, and in vivo efficacy by Maria F. Acosta, Priya Muralidharan, Carissa L. Grijalva, Michael D. Abrahamson, Don Hayes, Jeffrey R. Fineman, Stephen M. Black and Heidi M. Mansour in Therapeutic Advances in Respiratory Disease
Notes from: Peer Review
Creators: name: Sewell, Claire
Publisher: name: Humanities Commons
Year: 2023

description: The formal assessment process for published academic research provides a good opportunity for researchers at any stage to get involved in the wider academic conversation. It helps you to develop skills including critical reading, giving appropriate feedback and can help to enhance your own academic writing to improve your chances at publication. This session will outline the different types of peer review, how to get involved in the process, what typical reviews look for and how you can use this activity to enhance your professional reputation.
Saneamento Básico: O que é, responsabilidade, vetores e profilaxia.
Creators: name: Dos Santos De Lucena, José Carlos Corrêa Bento
Publisher: name: figshare
Year: 2025
Subjects: classificationCode: 420699
subject: Public health not elsewhere classified
classificationCode: 420605
subject: Preventative health care

description: O trabalho analisa o saneamento básico como direito essencial e seu impacto na saúde pública. Destaca a falta de infraestrutura em comunidades vulneráveis, como Jardim Gramacho (Duque de Caxias-RJ), onde moradores enfrentam problemas de abastecimento de água, coleta de lixo e esgoto. A pesquisa, baseada em dados do IBGE e reportagens, mostra que a precariedade do saneamento contribui para doenças como dengue e verminoses. Conclui-se que são necessários mais investimentos, fiscalização e conscientização para garantir melhores condições sanitárias no Brasil.
Copper-alloy chatelaine pendant
Creators: name: Hamerow, Helena
Publisher: name: University of Oxford
Year: 2021
Subjects: Archaeology

description: Gatty Slip: Small brass instrument, found at Gilton Town, Kent. Formerly in the Faussett coll. Vide Inven. Sep. pl. 12 fig. 6 [image]Bronze chatelaine hanger with spear-shaped terminal, length with ring 3.6cm. Very similar to no. M 6025, and from same set, but spear decorated on one side only with row of 3 small circlets.The pendant is likely to have come from one of the graves that produced copper-alloy chatelaine pendants: 27, 41, 76, 81 or 87. – D.H. & B.B.
Notes from: Peer Review
Creators: name: Sewell, Claire
Publisher: name: unknown
Year: 2023

description: The formal assessment process for published academic research provides a good opportunity for researchers at any stage to get involved in the wider academic conversation. It helps you to develop skills including critical reading, giving appropriate feedback and can help to enhance your own academic writing to improve your chances at publication. This session will outline the different types of peer review, how to get involved in the process, what typical reviews look for and how you can use this activity to enhance your professional reputation.
Comparison of effect of CdS QD and ZnS QD and their corresponding salts on growth, chlorophyll content and antioxidative capacity of tomato
Creators: name: Pavlicevic, Milica
name: Pagano, Luca
name: Villani, Marco
name: Zappettini, Andrea
name: Paesano, Laura
name: Bonas, Urbana
name: Marmiroli, Nelson
name: Marmiroli, Marta
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Plant Biology
subject: Computational Biology

description: When applied in the same concentration to tomato plants, cadmium sulfate (CdSO4) and zinc sulfate (ZnSO4) were transported from soil to roots and from roots to shoots more readily than their nano counterparts: cadmium sulfide quantum dots (CdS QD) and zinc sulfide quantum dots (ZnS QD). Compared to the CdS QD, he higher rate of transport of CdSO4 resulted in a greater negative effect on growth, chlorophyll content, antioxidant properties, lipid peroxidation and activation of antioxidant defence systems. Although ZnSO4 was transported more rapidly than ZnS QD, the overall effect of Zn addition was positive (increase in total plant mass, stem length, antioxidant content and decrease in lipid peroxidation). However, these effects were more pronounced in the case of ZnS QD, suggesting that the mechanisms underpinning the activity of ZnS QD and ZnSO4 were different. Thus, the risk of phytotoxicity and food chain transfer of the two elements depended on their form (salt or nanoform), and consequently their effects on plants’ growth and physiology were different. This work elucidates the mechanisms underlying the responses of CdS QD and ZnS QD in contrast to those of their corresponding salts on tomato plants. Our results showed that faster transport from roots to leaves in the case of salts in respect to the nanoform augment their detrimental impact on tomato’s antioxidant properties and growth and make the nanoform of both a better alternative for crop application either as fertilizers or as pesticides.
sj-pdf-5-tar-10.1177_1753466621998245 – Supplemental material for Advanced therapeutic inhalation aerosols of a Nrf2 activator and RhoA/Rho kinase (ROCK) inhibitor for targeted pulmonary drug delivery in pulmonary hypertension: design, characterization, aerosolization, in vitro 2D/3D human lung cell cultures, and in vivo efficacy
Creators: name: Acosta, Maria F.
name: Muralidharan, Priya
name: Grijalva, Carissa L.
name: Abrahamson, Michael D.
name: Hayes, Don
name: Fineman, Jeffrey R.
name: Black, Stephen M.
name: Mansour, Heidi M.
Publisher: name: SAGE Journals
Year: 2021
Subjects: subject: 111702 Aged Health Care
subject: FOS: Health sciences
subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: FOS: Clinical medicine
subject: 110203 Respiratory Diseases

description: Supplemental material, sj-pdf-5-tar-10.1177_1753466621998245 for Advanced therapeutic inhalation aerosols of a Nrf2 activator and RhoA/Rho kinase (ROCK) inhibitor for targeted pulmonary drug delivery in pulmonary hypertension: design, characterization, aerosolization, in vitro 2D/3D human lung cell cultures, and in vivo efficacy by Maria F. Acosta, Priya Muralidharan, Carissa L. Grijalva, Michael D. Abrahamson, Don Hayes, Jeffrey R. Fineman, Stephen M. Black and Heidi M. Mansour in Therapeutic Advances in Respiratory Disease