cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Understanding insight development in early psychosis : a narrative approach
Creators: name: Macnaughton, Eric
Publisher: name: University of British Columbia
Year: 2008

description: Intervening early in the course of psychotic illness (e.g. schizophrenia) may significantly improve prospects for the recovery, both in medical and psychosocial terms, of the individuals who experience these conditions. Engaging such individuals in care, however, remains a challenge. One barrier to engagement is lack of insight, or the low illness awareness that is considered to be a typical characteristic of people who experience psychotic illnesses, particularly in their early phases. The dominant view of this phenomenon is that it is primarily related to the illness itself and thus is biologically based. There is reason to believe, however, that understanding the psychosis experience is also an interpretive process, and that the meaning of this experience for the individual arises out of dialogue between the person, mental health professionals and significant others. There is also reason to believe that the relationship between insight and recovery may not be as straightforward as presumed. While the dominant view sees insight as a crucial condition for recovery, emerging evidence suggests that insight once gained may lead to depression and demoralization. Insight thus may be understood as an interpretive, dialogical process that is fundamentally narrative in nature, the consequences of which may be divergent. Using qualitative methods (constructivist grounded theory complemented by narrative analysis), the present study sought to understand the process by which insight developed in early psychosis, and sought to explore the relationship between insight and the early stages of illness management and recovery, as reflected by the written and oral accounts of twelve individuals who were within the first three years of illness. Overall, the results suggest that insight development in early psychosis can be conceptualized as the process of coming to an acceptable, adaptive explanation. More specifically, the results first of all suggest that insight development involves finding or negotiating an account of illness that fits or can be accommodated with the individual’s own story of the psychosis experience. The process also involves finding an account of illness and its treatment that can be envisioned as a helpful rather than disruptive aspect of the individual’s future biography.
Malcolmia maritima R. Br.
Creators: name: Info Flora
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Brassicales
Brassicaceae
Malcolmia
Malcolmia maritima

description: Malcolmia maritima (L.) R. Br.
Art ISFS: 252750 Checklist: 1028240 Brassicaceae Malcolmia Malcolmia maritima (L.) R. Br.
ZusammenfassungKEINE ANGABE
Ökologie
Lebensraum Lebensraumnach Delarze & al. 2015
KEINE ANGABE
Ökologische Zeigerwerte nach Landolt & al. (2010)
BodenfaktorenKlimafaktorenSalztoleranzFeuchtezahl F--Lichtzahl L--Salzzeichen--Reaktionszahl R--Temperaturzahl T--Nährstoffzahl N--Kontinentalitätszahl K--
Nomenklatur
Gültiger Name (Checklist 2017):Malcolmia maritima(L.) R. Br.
Volksname
Deutscher Name: -- Nom français: -- Nome italiano: --
Status Indigenat: Kultivierte Pflanze ohne Tendenz zur Verwilderung
Liste der gefährdeten Pflanzen IUCN(nach Walter & Gillett 1997): Nein
description: Published as part of Info Flora, 2021,
Additional file 19: Table S13. of Bone-associated gene evolution and the origin of flight in birds
Creators: name: JoĂŁo Machado
name: Johnson, Warren
name: M. Gilbert
name: Guojie Zhang
name: Jarvis, Erich
name: OâBrien, Stephen
name: Antunes, Agostinho
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy

description: Estimation of dN and dS for each branch under Model 0. For each branch, average of dN and dS and the corresponding standard deviation. (DOC 165 kb)
Additional file 8: Table S5. of Bone-associated gene evolution and the origin of flight in birds
Creators: name: JoĂŁo Machado
name: Johnson, Warren
name: M. Gilbert
name: Guojie Zhang
name: Jarvis, Erich
name: OâBrien, Stephen
name: Antunes, Agostinho
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer

description: Branch-site model for birds. Genes were the alternate model was preferred relatively to the null model are highlighted as italic and underlined positively selected. (DOC 141 kb)
Additional file 3: Figure S2. of Bone-associated gene evolution and the origin of flight in birds
Creators: name: JoĂŁo Machado
name: Johnson, Warren
name: M. Gilbert
name: Guojie Zhang
name: Jarvis, Erich
name: OâBrien, Stephen
name: Antunes, Agostinho
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Genomic location of bone-associated genes. The circular ideogram represents the genomic location of bone-associated genes in four of the studied species. Each end-line represents the location of the bone-associated genes. Blue indicates human chromosomes (mammal representative). Dark orange the zebra finch (flying species), green the chicken and yellow the turkey (flightless species). (DOC 896 kb)
Implication of Ab Initio, QM/MM, and molecular dynamics calculations on the prediction of the therapeutic potential of some selected HDAC inhibitors
Creators: name: Dushanan, Ramachandren
name: Weerasinghe, Samantha
name: Dissanayake, Dhammike P.
name: Senthilinithy, Rajendram
Publisher: name: Taylor & Francis
Year: 2022
Subjects: Biophysics
Biochemistry
Space Science
Physical Sciences not elsewhere classified
Molecular Biology
Pharmacology
Chemical Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Information Systems not elsewhere classified
Cancer

description: Epigenetics regulates gene expression through post-translational modification of protein complexes accompanying DNA. The most significant modification in histone protein is deacetylation, regulated by HDAC enzyme. This study focuses on the HDAC inhibitors' effect on the HDLP enzyme's stability. Ab initio quantum mechanics (QM), Quantum mechanics/molecular mechanics (QM/MM), and Molecular dynamics (MD) analyses were executed to investigate the changes that occur in the HDLP enzyme due to inhibitor binding. LBH589, PCI24781, PXD101, LAQ824, SB939, and RAS2410 were selected as inhibitors, and SAHA was used as a reference inhibitor. The crystal structure of the HDLP enzyme was obtained from the Protein Data Bank, and the inhibitor structures were optimized using G09W. AutoDock-Vina was used to perform docking, and the resultant complex was used to perform MD simulation. The QM/MM two-layer binding energy studies revealed that the stabilities of HDLP-LBH589 and HDLP-PCI24781 are higher than the other studied complexes. Also, it was found that the pKa values of the inhibitors are correlated with their binding energy. Further, the trajectory analysis results showed that the complexes of HDLP with LBH589, PCI24781, and SAHA are comparatively more stable. Therefore, it is concluded that LBH589 and PCI24781 are excellent candidates to be studied as HDLP inhibitors.
Oxyberberine an oxoderivative of berberine confers neuroprotective effects in controlled-cortical impact mouse model of traumatic brain injury
Creators: name: Tentu, Priya Mounika
name: Bazaz, Mohd Rabi
name: Pasam, Tulasi
name: Shaikh, Arbaz Sujat
name: Rahman, Ziaur
name: Mourya, Atul
name: Kaki, Venkata Rao
name: Madan, Jitender
name: Dandekar, Manoj P.
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Biochemistry
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mental Health
subject: Cardiology

description: Traumatic brain injury (TBI) is known as a silent epidemic that causes many deaths and disabilities worldwide. We examined the response of oxyberberine (OBB) in lipopolysaccharide-stimulated BV2 microglial cells and a controlled-cortical impact (CCI) mouse model of TBI. We synthesized OBB from berberine, and also prepared OBB-nanocrystals (OBB-NC). Male C57BL/6 mice were used for CCI surgery, and post-CCI neurobehavioral deficits were assessed from 1 h after injury through 21 days post-injury (dpi). OBB treatment reduced the lipopolysaccharide-triggered elevated levels of reactive oxygen species, nitric oxide, and nuclear factor kappa B (NF-κB) in BV2 microglial cells, indicating a neuroprotective potential. CCI-operated mice exhibited significant neurological deficits on 1, 3, and 5 dpi in neurological severity scoring and rotarod assay. OBB (25 and 50 mg/kg/day) and OBB-NC (3 mg/kg/day) ameliorated these neurological aberrations. Mice subjected to CCI surgery also displayed anxiogenic- and depression-like behaviours, and cognitive impairments in forced-swimming test and elevated-zero maze, and novel object recognition task, respectively. Administration of OBB reduced these long-term neuropsychiatric complications, and also levels of toll-like receptor 4 (TLR4), high-motility group protein 1 (HMGB1), NF-κB, tumour necrosis factor-alpha and interleukin 6 cytokines in the ipsilateral cortex of mice. We suggest that the administration of OBB offers neuroprotective effects via inhibition of HMGB1-mediated TLR4/NFκB pathway.
Myagrum perfoliatum L.
Creators: name: Info Flora
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Brassicales
Brassicaceae
Myagrum
Myagrum perfoliatum

description: Myagrum perfoliatum L.
Hohldotter
Art ISFS: 265600 Checklist: 1029670 Brassicaceae Myagrum Myagrum perfoliatum L.
Zusammenfassung
Artbeschreibung (nach Lauber & al. 2018): 20-60 cm hoch, oft verzweigt, kahl, blaugrün. Grundständige Blätter schmal-oval, in einen Stiel verschmälert. Stängelblätter zungenförmig, ganzrandig oder fein gezähnt, sitzend und den Stängel mit 2 Zipfeln umfassend. Kronblätter hellgelb, 3-4 mm lang, vorn gerundet. Früchte birnenförmig, 5-8 mm lang, aufrecht, plötzlich in den kurzen Griffel verschmälert, 2-3mal so lang wie der kegelförmige Stiel.
Blütezeit (nach Lauber & al. 2018): 5-6
Standort und Verbreitung in der Schweiz (nach Lauber & al. 2018): Äcker, Schuttplätze / kollin / Nur adventiv BE (Thun), BA, VD
Verbreitung global (nach Lauber & al. 2018): Ursprünglich ostmediterran
Ökologische Zeigerwerte (nach Landolt & al. 2010) 143-353.t.2n=14
Ökologie
Lebensform Therophyt
Lebensraum Lebensraumnach Delarze & al. 2015
8.2.1.2 - Kalkreiche Getreideäcker (Caucalidion)
fett Dominante Art, welche das Aussehen des Lebensraumes mitprägt Charakterart Weniger strikt an den Lebensraum gebundene Art
Ökologische Zeigerwerte nach Landolt & al. (2010)
BodenfaktorenKlimafaktorenSalztoleranzFeuchtezahl Fsehr trockenLichtzahl LhalbschattigSalzzeichen--Reaktionszahl Rneutral bis basisch (pH 5.5-8.5)Temperaturzahl Tsehr warm-kollin (nur an wärmsten Stellen, Hauptverbreitung in Südeuropa)Nährstoffzahl Nmässig nährstoffarm bis mässig nährstoffreichKontinentalitätszahl Ksubozeanisch bis subkontinental (mittlere Luftfeuchtigkeit, mässige Temperaturschwankungen und mässig tiefe Wintertemperaturen)
Nomenklatur
Gültiger Name (Checklist 2017):Myagrum perfoliatumL.
Volksname Deutscher Name: Hohldotter Nom français: Myagre perfolié Nome italiano: Miagro liscio
Übereinstimmung mit anderen Referenzwerken
RelationNomReferenzwerkeNo=Myagrum perfoliatum L.Checklist 2017265600=Myagrum perfoliatum L.Flora Helvetica 2001619=Myagrum perfoliatum L.Flora Helvetica 2012856=Myagrum perfoliatum L.Flora Helvetica 2018856=Myagrum perfoliatum L.Index synonymique 1996265600=Myagrum perfoliatum L.Landolt 19771329=Myagrum perfoliatum L.Landolt 19911132=Myagrum perfoliatum L.SISF/ISFS 2265600=Myagrum perfoliatum L.Welten & Sutter 1982470
= Taxon stimmt mit akzeptiertem Taxon überein (Checklist 2017)  Taxon enthält (neben anderen) auch das akzeptierte Taxon (Checklist 2017)
Status Indigenat: Neophyt: nach der Entdeckung von Amerika in der Region aufgetreten (nach 1500)
Liste der gefährdeten Pflanzen IUCN(nach Walter & Gillett 1997): Nein
description: Published as part of Info Flora, 2021,
MOESM2 of Microbial synthesis of propane by engineering valine pathway and aldehyde-deformylating oxygenase
Creators: name: Zhang, Lei
name: Yajing Liang
name: Wu, Wei
name: Xiaoming Tan
name: Xuefeng Lu
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Computational Biology

description: Additional file 2: Codon-optimized gene sequence PMT1231 from P. marinus MIT 9313.
El Auge de las Cerezas Chilenas y el Desafío del Mercado Chino
Creators: name: Montt Strabucchi, Maria
name: Urdinez, Francisco
name: Aguirre, Italo
name: Matamala, Gonzalo
Publisher: name: ICLAC
Year: 2024

description: En los últimos años, Chile ha experimentado un notable auge en la producción de cerezas. Factores como el crecimiento constante en la superficie cultivada, la cantidad exportada y el valor de las exportaciones son prueba de esta tendencia. A su vez, China ha emergido como el principal destino de las cerezas chilenas en el mercado internacional, acaparando más del 90% de las exportaciones cada temporada.

Esta prominente preferencia se debe en gran medida al elevado precio que los consumidores chinos están dispuestos a pagar por las cerezas, especialmente durante el Año Nuevo Chino, debido al significativo valor cultural que tiene este fruto. En este contexto, el sector productor chileno alberga expectativas optimistas, anticipando que los altos precios se mantendrán y que la producción continuará expandiéndose a corto plazo. De hecho, en ciertos círculos especializados ha surgido la idea de que Chile no sería capaz de satisfacer la demanda china incluso si se duplicara la superficie plantada de cerezos.

No obstante, algunos actores de la industria expresan preocupación por la concentración excesiva del mercado y temen un posible comportamiento adverso por parte de China como retaliación ante alguna crisis bilateral. Asimismo, las posibles dificultades a corto plazo no se relacionan tanto con la demanda de cerezas como con la oferta, ya que en Chile comienzan a surgir señales que indican que el desarrollo agroindustrial podría estar alcanzando sus límites, debido principalmente al estrés hídrico y la falta de mano de obra.
MOESM1 of Microbial synthesis of propane by engineering valine pathway and aldehyde-deformylating oxygenase
Creators: name: Zhang, Lei
name: Yajing Liang
name: Wu, Wei
name: Xiaoming Tan
name: Xuefeng Lu
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1. Supplementary figures and tables.
Non-surgical management of chronic subdural hematoma: insights and future perspectives from an international survey including neurosurgeons from 90 countries worldwide
Creators: name: De Maria, Lucio
name: Chaurasia, Bipin
name: Agosti, Edoardo
name: Garg, Kanwaljeet
name: Burkhardt, Jan-Karl
name: Goehre, Felix
name: Borghei-Razavi, Hamid
name: Servadei, Franco
name: Fontanella, Marco Maria
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy

description: Chronic subdural hematoma (cSDH) is one of the most common neurosurgical conditions. Although surgical evacuation is still the gold standard for treatment, recent advances have led to the development of other management strategies, such as medical therapies and endovascular middle meningeal artery (MMA) embolization. Through this international survey, we investigated the global trends in cSDH management, focusing on medical and endovascular treatments. A 14-question, web-based, anonymous survey was distributed to neurosurgeons worldwide. Most responders do not perform MMA embolization (69.5%) unless for specific indications (29.6%). These indications include residual cSDH after surgical evacuation (58.9%) or cSDH in patients on antiplatelet medications to avoid surgical evacuation (44.8%). Survey participants from teaching versus non-teaching hospitals (p = 0.002), public versus private hospitals (p = 0.022), and Europe versus other continents (p < 0.001) are the most users of MMA embolization. A large number of participants (51%) declare they use a conservative/medical approach, mainly to avoid surgery in patients with small cSDH (74.8%). This survey highlights the current trends of cSDH management, focusing on conservative and MMA embolization treatment strategies. Most responders prefer a conservative approach for patients with small cSDHs not requiring surgical evacuation. However, in higher-risk scenarios such as residual hematomas after surgery or patients on antiplatelet medications, MMA embolization is regarded as a reasonable option by participants. Future studies should clarify the indications of MMA embolization, including appropriate patient selection and efficacy as a stand-alone procedure.
Additional file 10: of Transcriptome sequencing reveals thousands of novel long non-coding RNAs in B cell lymphoma
Creators: name: Akanksha Verma
name: Yanwen Jiang
name: Du, Wei
name: Fairchild, Lauren
name: Melnick, Ari
name: Elemento, Olivier
Publisher: name: Figshare
Year: 2015
Subjects: subject: Molecular Biology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: 60506 Virology

description: Figure S5. Differentially expressed known lncRNAs across ABC and GCB subtypes. (PDF 1956 kb)
Additional file 13: of Transcriptome sequencing reveals thousands of novel long non-coding RNAs in B cell lymphoma
Creators: name: Akanksha Verma
name: Yanwen Jiang
name: Du, Wei
name: Fairchild, Lauren
name: Melnick, Ari
name: Elemento, Olivier
Publisher: name: Figshare
Year: 2015
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Hematology
subject: 60506 Virology
subject: Computational Biology

description: Figure S8. Transposable element overlap for Known lncRNA transcripts. (PDF 238 kb)
Additional file 6: of Transcriptome sequencing reveals thousands of novel long non-coding RNAs in B cell lymphoma
Creators: name: Akanksha Verma
name: Yanwen Jiang
name: Du, Wei
name: Fairchild, Lauren
name: Melnick, Ari
name: Elemento, Olivier
Publisher: name: Figshare
Year: 2015
Subjects: subject: Molecular Biology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Hematology
subject: 60506 Virology

description: Figure S4.Â Divergently Transcribled lncRNAs. (PDF 288 kb)
title: #lassoleadership. Erfolgreiche Führung nach Ted Lasso
Creators: name: Steiner, Eda
Publisher: name: FH Vorarlberg (Fachhochschule Vorarlberg)
Year: 2024
Subjects: subject: 330 Wirtschaft

description: Ted Lasso, eine fiktive Führungskraft aus der gleichnamigen Serie, hat in den vergangenen Jahren online aufgrund seines unkonventionellen Führungsstils sehr viel Aufmerksamkeit be- kommen. Diese Studie untersucht sowohl Ted Lassos Führungsstil als auch die Selbstfüh- rungsstrategien, die er für seine optimistische Grundhaltung anwendet. Basierend auf einer umfangreichen Literaturrecherche wurden die Verhaltensanker der Füh- rung nach dem Full Range of Leadership Model von Bass & Avolio (1991) sowie Verhaltens- weisen der Selbstführungsstrategien nach Manz (1986) erhoben, welche in weiterer Folge für die qualitative Inhaltsanalyse von der ersten Staffel der Serie Ted Lasso herangezogen wur- den. Die Ergebnisse dieser Studie zeigen, dass Ted Lasso eine transformationale Führungs- kraft ist, die zusätzliche Elemente wie Humor und die Einbeziehung von privaten Informatio- nen einbinden. Für seine positive Grundhaltung wendet Ted Lasso das Goldfischprinzip, wel- ches das Vergessen von negativen Erlebnissen und Widerständen beinhaltet, kombiniert mit Humor und Verhaltensweisen der konstruktiven Denkmuster Strategien an. Diese Arbeit schließt die Forschungslücke zum bislang unbekannten Führungsstil von Ted Lasso und bietet neue Erkenntnisse im Bereich der Selbstführung.
Additional file 5: of Transcriptome sequencing reveals thousands of novel long non-coding RNAs in B cell lymphoma
Creators: name: Akanksha Verma
name: Yanwen Jiang
name: Du, Wei
name: Fairchild, Lauren
name: Melnick, Ari
name: Elemento, Olivier
Publisher: name: Figshare
Year: 2015
Subjects: subject: Cell Biology
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Cancer
subject: Hematology

description: Figure S3.Â Differential expression of lncRNAs across Normal B Cells and Primary Tumors (PDF 1368 kb)
Regarding Melvin P. Elmore
Creators: name: (:Null)
Publisher: name: The University of British Columbia
Year: 2019

description: Elmore had interest in a set of mining claims on Germanston Creek, known as the Enterprise Co., and sold and disposed of these for the good of his creditors. Includes notice from J.Lindsay, a chief constable, regarding Elmore’s estate, and copy of letter to W. Fitzgerald.
Additional file 4: of Transcriptome sequencing reveals thousands of novel long non-coding RNAs in B cell lymphoma
Creators: name: Akanksha Verma
name: Yanwen Jiang
name: Du, Wei
name: Fairchild, Lauren
name: Melnick, Ari
name: Elemento, Olivier
Publisher: name: Figshare
Year: 2015
Subjects: subject: Cell Biology
subject: Molecular Biology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Hematology
subject: 60506 Virology

description: Figure S2.Â  Differential expression lncRNAs across NaĂŻve B cells and Centroblasts. (PDF 425 kb)
Macrosteps dynamics and the growth of crystals and epitaxial layers
Creators: name: Krukowski, Stanislaw
name: Sakowski, Konrad
name: Strak, Paweł
name: Kempisty, Paweł
name: Piechota, Jacek
name: Grzegory, Izabella
Publisher: name: arXiv
Year: 2022
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Step pattern stability of the vicinal surfaces during growth was analyzed using various surface kinetic models. It was shown that standard analysis of the vicinal surfaces provides no indication on the possible step coalescence and therefore could not be used to elucidate macrostep creation during growth. A scenario of the instability, leading go macrostep creation was based on the dynamics of the step train. The critical is step motion at the rear of the train which leads to double and multiple step creation. The condition is that the step density ratio in and out of the train lower than 2 prevents double step formation irrespective of the kinetics. For higher step density ratio low density of the step promotes single step stability. Fast step kinetics from lower terrace stabilizes the single steps slow (high barrier) is promoting step coalescence. The incorporation kinetics from upper terrace role is close to neutral. The creation of double step creates slow the step in front to accelerate and catch the previous double step while those behind catch up the double step creating multistep structure. The multistep are not mobile as the alimentation leads to emission of single step which moves forward. The final structure consist of macrosteps and superterraces with the number of single steps moving forward. Thus the single step motion is essential crystal growth mode despite the presence of the macrosteps. The macrostep are prone to creation of the overhangs which results from surface dynamics coupling to impingement from the mother phase. The angular preferential access of the bulk material to the macrostep edge, leads to diffusive instability. Therefore it is expected that harmful influence of the macrosteps by creation of inclusions and dislocation is stronger during growth from the liquid phase.
description: 6 figures, 24 pages
Additional file 11: of Transcriptome sequencing reveals thousands of novel long non-coding RNAs in B cell lymphoma
Creators: name: Akanksha Verma
name: Yanwen Jiang
name: Du, Wei
name: Fairchild, Lauren
name: Melnick, Ari
name: Elemento, Olivier
Publisher: name: Figshare
Year: 2015
Subjects: subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Hematology
subject: 60506 Virology

description: Figure S6. Visualizing novel lncRNAs in reference to super enhancers. (PDF 404 kb)
When seafood feeds the spirit yet poisons the body : developing health indicators for risk assessment in a Native American fishing community
Creators: name: Donatuto, Jamie
Publisher: name: University of British Columbia
Year: 2008

description: Current US government risk assessment and management regulations and policies are based on a position that views risk as an objective measure of a predictable physiological morbidity or mortality outcome that is not otherwise connected to social or cultural beliefs and values. Whereas human health risk assessments are meant to determine the probability of adverse impacts from particular hazards, the conventional risk assessment framework fails to consider Native American definitions of health and so risk. This study was conducted with the Coast Salish Swinomish Indian Tribal Community of Washington State, where contamination of their aquatic natural resources has been found. By conducting two series of interviews with traditional high-use seafood consumers, experts and elders from the Swinomish Indian Tribal Community, and by averting use of what I describe herein as ‘conventional’ fish consumption survey, the study allowed interviewees to provide a more complex narrative set of details and information that bestowed a much more accurate picture of the reasoning behind seafood consumption habits within the community. Among the more salient points that emerged from the interviews was that seafood represents a symbolic, deeply meaningful food source that is linked to a multi-dimensional ‘Swinomish’ concept of health. Yet drastic changes in access, harvest and consumption have occurred over time, and continue to this day. A health evaluation tool was also devised using simple descriptive scaled rankings to elucidate non-physiological health risks and impacts in relation to contaminated seafood. Findings demonstrate that community cohesion, food security, ceremonial use and knowledge transmission all play primary roles as concerns the Swinomish notions of health, and that these indicators are regarded as equally important when juxtaposed to physical indicators of health. Thus, to eat less seafood—as prescribed by current policy and decision-making procedures when contamination is present—is actually detrimental to the multi-dimensional concept of health as defined by the Swinomish. The evaluation tool may be used in conjunction with the conventional risk assessment framework to more accurately and comprehensively deduce risks and impacts.
Data: Effect of tissue fixation on the optical properties of structural components assessed by non-linear microscopy imaging
Creators: name: Markus, Andrea
name: Ferrari, Daniele
name: Alves, Frauke
name: Ramos-Gomes, Fernanda
Publisher: name: Zenodo
Year: 2024

description: Data and Image from the publication: Effect of tissue fixation on the optical properties of structural components assessed by non-linear microscopy imaging
Post-selection inference for e-value based confidence intervals
Creators: name: Xu, Ziyu
name: Wang, Ruodu
name: Ramdas, Aaditya
Publisher: name: arXiv
Year: 2022
Subjects: subject: Statistics Theory (math.ST)
subject: Methodology (stat.ME)
subject: FOS: Mathematics
subject: FOS: Computer and information sciences

description: Suppose that one can construct a valid $(1-δ)$-confidence interval (CI) for each of $K$ parameters of potential interest. If a data analyst uses an arbitrary data-dependent criterion to select some subset $S$ of parameters, then the aforementioned CIs for the selected parameters are no longer valid due to selection bias. We design a new method to adjust the intervals in order to control the false coverage rate (FCR). The main established method is the "BY procedure" by Benjamini and Yekutieli (JASA, 2005). The BY guarantees require certain restrictions on the selection criterion and on the dependence between the CIs. We propose a new simple method which, in contrast, is valid under any dependence structure between the original CIs, and any (unknown) selection criterion, but which only applies to a special, yet broad, class of CIs that we call e-CIs. To elaborate, our procedure simply reports $(1-δ|S|/K)$-CIs for the selected parameters, and we prove that it controls the FCR at $δ$ for confidence intervals that implicitly invert e-values; examples include those constructed via supermartingale methods, via universal inference, or via Chernoff-style bounds, among others. The e-BY procedure is admissible, and recovers the BY procedure as a special case via a particular calibrator. Our work also has implications for post-selection inference in sequential settings, since it applies at stopping times, to continuously-monitored confidence sequences, and under bandit sampling. We demonstrate the efficacy of our procedure using numerical simulations and real A/B testing data from Twitter.
description: 46 pages, 6 figures
R.v Qua-whaen & Helleah 14; Charged with murder & larceny; 1871/10/00
Creators: name: (:Null)
Publisher: name: The University of British Columbia
Year: 2019

description: Information &complaint (3); of Sergeant McMillan; 1871/10/01 Commitment to appear; as witnesses; 1871/10/02 Deposition of Sucksackaluck; a Skemeen Indian; 1871/10/03 Depositionof Serg.McMillan; 1871/10/04 Deposition of Louise; a Cowichan Indian; 1871/10/05 Deposition of Sinamutchee; a Cowichan Indian; 1871/10/06 Deposition of Susan; a Cowichan Indian ( & recall); 1871/10/07 Deposition of Seelat; a Cowichan Indian; 1871/10/08 Deposition of George Alipp; 1871/10/09
How in situ atmospheric transmission can affect cosmological constraints from type Ia supernovae ?
Creators: name: Neveu, Jérémy
name: Brémaud, Vincent
name: Bongard, Sébastien
name: Copin, Yannick
name: Dagoret-Campagne, Sylvie
name: Moniez, Marc
Publisher: name: arXiv
Year: 2022
Subjects: subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: The measurement of type Ia supernova colours in photometric surveys is the key to access to cosmological distances. But for future large surveys like the Large Survey of Space and Time undertaken by the Vera Rubin Observatory in Chile, the large statistical power of the promised catalogues will make the photometric calibration uncertainties dominant in the error budget and will limit our ability to use it for precision cosmology. The knowledge of the on-site atmospheric transmission on average for the full survey, or for season or each exposure can help reaching the sub-percent precision for magnitudes. We will show that measuring the local atmospheric transmission allows to correct the raw magnitudes to reduce the photometric systematic uncertainties. Then we will present how this strategy is implemented at the Rubin Observatory via the Auxiliary Telescope and its slitless spectrograph.
description: 2 pages, 4 figures, contribution to the 2022 Cosmology session of the 56th Rencontres de Moriond
Additional file 3:  of Transcriptome sequencing reveals thousands of novel long non-coding RNAs in B cell lymphoma
Creators: name: Akanksha Verma
name: Yanwen Jiang
name: Du, Wei
name: Fairchild, Lauren
name: Melnick, Ari
name: Elemento, Olivier
Publisher: name: Figshare
Year: 2015
Subjects: subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Hematology

description: Figure S1. lncRNA overlap with other Cancers. (PDF 259 kb)
A Spiking Neural Network based on Neural Manifold for Augmenting Intracortical Brain-Computer Interface Data
Creators: name: Zheng, Shengjie
name: Li, Wenyi
name: Qian, Lang
name: He, Chenggang
name: Li, Xiaojian
Publisher: name: arXiv
Year: 2022
Subjects: subject: Neurons and Cognition (q-bio.NC)
subject: Artificial Intelligence (cs.AI)
subject: FOS: Biological sciences
subject: FOS: Computer and information sciences

description: Brain-computer interfaces (BCIs), transform neural signals in the brain into in-structions to control external devices. However, obtaining sufficient training data is difficult as well as limited. With the advent of advanced machine learning methods, the capability of brain-computer interfaces has been enhanced like never before, however, these methods require a large amount of data for training and thus require data augmentation of the limited data available. Here, we use spiking neural networks (SNN) as data generators. It is touted as the next-generation neu-ral network and is considered as one of the algorithms oriented to general artifi-cial intelligence because it borrows the neural information processing from bio-logical neurons. We use the SNN to generate neural spike information that is bio-interpretable and conforms to the intrinsic patterns in the original neural data. Ex-periments show that the model can directly synthesize new spike trains, which in turn improves the generalization ability of the BCI decoder. Both the input and output of the spiking neural model are spike information, which is a brain-inspired intelligence approach that can be better integrated with BCI in the future.
description: 12pages , 9 figures
An Introductory Review of Spiking Neural Network and Artificial Neural Network: From Biological Intelligence to Artificial Intelligence
Creators: name: Zheng, Shengjie
name: Qian, Lang
name: Li, Pingsheng
name: He, Chenggang
name: Qin, Xiaoqin
name: Li, Xiaojian
Publisher: name: arXiv
Year: 2022
Subjects: subject: Neural and Evolutionary Computing (cs.NE)
subject: Artificial Intelligence (cs.AI)
subject: FOS: Computer and information sciences

description: Recently, stemming from the rapid development of artificial intelligence, which has gained expansive success in pattern recognition, robotics, and bioinformatics, neuroscience is also gaining tremendous progress. A kind of spiking neural network with biological interpretability is gradually receiving wide attention, and this kind of neural network is also regarded as one of the directions toward general artificial intelligence. This review introduces the following sections, the biological background of spiking neurons and the theoretical basis, different neuronal models, the connectivity of neural circuits, the mainstream neural network learning mechanisms and network architectures, etc. This review hopes to attract different researchers and advance the development of brain-inspired intelligence and artificial intelligence.
description: 12 pages, 24 figures
Additional file 12: of Transcriptome sequencing reveals thousands of novel long non-coding RNAs in B cell lymphoma
Creators: name: Akanksha Verma
name: Yanwen Jiang
name: Du, Wei
name: Fairchild, Lauren
name: Melnick, Ari
name: Elemento, Olivier
Publisher: name: Figshare
Year: 2015
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Hematology
subject: 60506 Virology

description: Figure S7. TSS plot for protein coding genes. (PDF 337 kb)
Sketching sparse low-rank matrices with near-optimal sample- and time-complexity using message passing
Creators: name: Liu, Xiaoqi
name: Venkataramanan, Ramji
Publisher: name: arXiv
Year: 2022
Subjects: subject: Information Theory (cs.IT)
subject: Signal Processing (eess.SP)
subject: FOS: Computer and information sciences
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: E.4

description: We consider the problem of recovering an $n_1 \times n_2$ low-rank matrix with $k$-sparse singular vectors from a small number of linear measurements (sketch). We propose a sketching scheme and an algorithm that can recover the singular vectors with high probability, with a sample complexity and running time that both depend only on $k$ and not on the ambient dimensions $n_1$ and $n_2$. Our sketching operator, based on a scheme for compressed sensing by Li et al. and Bakshi et al., uses a combination of a sparse parity check matrix and a partial DFT matrix. Our main contribution is the design and analysis of a two-stage iterative algorithm which recovers the singular vectors by exploiting the simultaneously sparse and low-rank structure of the matrix. We derive a nonasymptotic bound on the probability of exact recovery, which holds for any $n_1\times n_2 $ sparse, low-rank matrix. We also show how the scheme can be adapted to tackle matrices that are approximately sparse and low-rank. The theoretical results are validated by numerical simulations and comparisons with existing schemes that use convex programming for recovery.
description: 46 pages, 14 figures. A shorter version appeared at the 2022 IEEE International Symposium on Information Theory
The evocation of meaning : a study of Image Theatre in three elementary classrooms
Creators: name: Wolfman-Robichaud, Sarah Leah
Publisher: name: University of British Columbia
Year: 2008

description: Over the course of the 2007/2008 school year, I visited three classrooms to investigate the effectiveness of Augusto Boal’s drama method, Image Theatre, with elementary-aged students. In Image Theatre, the practitioners and students use their bodies to create frozen images, which in turn become the focus of collaborative meaning- making. I applied the reflective practitioner methodology in my work as it allowed me to adapt to the rapidly altering situations that arise in elementary classrooms. Through reflecting on my interactions with students, I refined a set of teaching techniques that worked best to integrate Image Theatre into the classroom and ultimately into the curriculum. My research provides a qualitative analysis of the power of Image Theatre to foster student dialogue, develop empathic learning, and introduce conflict awareness techniques. My thesis highlights some specific exercises and theoretical frameworks that guided my work and produced the most effective results. The effects of applying Image Theatre to elementary-aged classrooms has not been extensively studied in the past and my research attempts to address this academic gap. It is my hope that future researchers will adapt my activities and further demonstrate the capacities of this theatre technique. Ultimately, I hope that Image Theatre methods can find a place in standard curricula.
The Contact Process with Switching
Creators: name: Blath, Jochen
name: Hermann, Felix
name: Reitmeier, Michel
Publisher: name: arXiv
Year: 2022
Subjects: subject: Probability (math.PR)
subject: FOS: Mathematics

description: In this paper, we introduce a type switching mechanism for the Contact Process on the lattice $\mathbb{Z}^d$. That is, we allow the individual particles/sites to switch between two (or more) types independently of one another, and the different types may exhibit specific infection and recovery dynamics.
 Such type switches can eg.\ be motivated from biology, where 'phenotypic switching' is common among micro-organisms. Our framework includes as special cases systems with switches between 'active' and 'dormant' states (the Contact Process with dormancy, CPD), and the Contact Process in a randomly evolving environment (CPREE) introduced by Broman (2007). The 'standard' multi-type Contact Process (without type-switching) can also be recovered as a limiting case.
 After constructing the process from a graphical representation, we establish several basic properties that are mostly analogous to the classical Contact Process. We then provide couplings between several variants of the system, which in particular yield the existence of a phase transition. Further, we investigate the effect of the switching parameters on the critical value of the system by providing rigorous bounds obtained from the coupling arguments as well as numerical and heuristic results. Finally, we investigate scaling limits for the process as the switching parameters tend to 0 (slow switching regime) resp.\ $\infty$ (fast switching regime). We conclude with a brief discussion of further model variants and questions for future research.
Additional file 1: Table S1 and Table S2. of Range expansion and habitat shift triggered elevated diversification of the rice genus (Oryza, Poaceae) during the Pleistocene
Creators: name: Lin, Li
name: Tang, Liang
name: Bai, Yun-Jun
name: Zhi-Yao Tang
name: Wang, Wei
name: Zhi-Duan Chen
Publisher: name: Figshare
Year: 2015
Subjects: subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Plant Biology

description: Table S1: Species of Oryza, including their genome types, life histories, habitats, and geographic distributions. Table S2: Species and their GenBank accession numbers used in this study. (PDF 42 kb)
R. v. Harry, an Indian (9doc); Charged with shooting with intent; 1871/09/00
Creators: name: (:Null)
Publisher: name: The University of British Columbia
Year: 2019

description: Indictment of Harry; plea guilty; sentence 1 year; 1871/09/01 Charge; by Wm Morley, J.P., Cowichan; 1871/09/02 Recognisance of bail (2); 1871/09/03 Information & complaint; of Sur-sar-kalur, a Chemainus Indian; 1871/09/04 Examination; of Sur-sar-kalur; 1871/09/04 Examination of Se-hap-ton; 1871/09/05 Deposition of Harry; the accused; 1871/09/06
Additional file 2: Figure S1 and Table S4. of Range expansion and habitat shift triggered elevated diversification of the rice genus (Oryza, Poaceae) during the Pleistocene
Creators: name: Lin, Li
name: Tang, Liang
name: Bai, Yun-Jun
name: Zhi-Yao Tang
name: Wang, Wei
name: Zhi-Duan Chen
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Pharmacology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: Plant Biology

description: Table S1: ML tree of Oryza. Figure S2: Biogeographical inference for Oryza based on Lagrange. Figure S3: Posterior probability distributions for the speciation and extinction rates obtained from Bayesian BiSSE using 6-paramter full model. Figure S4: Rate-through-time dynamics for Oryza inferred by BAMM. (PDF 265 kb)
Una mirada local: Institutos Confucio en Chile
Creators: name: Acevedo, Sophia
name: Hernández, Daniela
Publisher: name: ICLAC
Year: 2024

description: El posicionamiento de China como primer socio comercial de Chile ha implicado un importante esfuerzo por estudiar los aspectos económicos y diplomáticos de las relaciones sino-chilenas. Sin embargo, también resulta fundamental estudiar aquellos espacios y organizaciones que sean locus del intercambio cultural e interpersonal sino-chileno, como lo son los Institutos Confucio.

Este estudio se centra en los Institutos Confucio en Chile, explorando su papel como organizaciones birregionales en las relaciones sino-chilenas. Aunque China es el principal socio comercial de Chile, este análisis busca comprender cómo los Institutos Confucio facilitan el intercambio cultural e interpersonal entre ambos países.

Se emplearon 19 entrevistas cualitativas semi-estructuradas y observación participante y no participante en diversas actividades de los Institutos Confucio chilenos. Esta metodología permitió analizar tanto el aspecto educativo como el cultural de estas organizaciones.

Este estudio destaca al abordar los Institutos Confucio desde una perspectiva antropológica, considerando su naturaleza birregional y los desafíos que enfrentan en un contexto dual de gestión. Además, se enfatiza la importancia de comprender cómo son percibidos y recibidos en contextos políticos y culturales diversos.

Los Institutos Confucio en Chile no solo tienen un impacto lingüístico y cultural, evidenciado por el aumento de estudiantes interesados en aprender mandarín, sino que también actúan como mediadores interculturales. Su adaptación a los contextos locales, como el chileno, es crucial para su papel como facilitadores del encuentro cultural y el desarrollo de una perspectiva intercultural.