cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
title: Identifying and Assessing Ground Water in the Lower Rio Grande Valley, Texas Using Airborne Electromagetic Induction
Creators: name: Paine, Jeffrey G.
Publisher: name: The University of Texas at Austin
Year: 2000
Subjects: subject: Groundwater
subject: Lower Rio Grande Valley
subject: Texas
subject: airborne electromagnetic induction
subject: resource assessment

description: - Airborne EM can be used to explore to depths of 150 to 300m in fresh to moderately saline coastal plain aquifers. - Airborne EM surveys are a realistic alternative to drilling and seismic surveys to investigate Quaternary depositional systems. - Groundwater quality (as measured by TDS) appears to correlate to conductivity derived from airborne EM data. - Depositional patterns can be detected and environments inferred from airborne EM if the surveys are flown at appropriate line spacing and orientation. - Anomaly shapes and conductivity contrasts can be used to interpret likely water resource quality by combining geological and hydrological concepts.
Amphicoryna undetermined
Creators: name: Bergh, Eugene W.
name: Compton, John S.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Chromista
Foraminifera
Nodosariata
Vaginulinida
Vaginulinidae
Amphicoryna
Amphicoryna undetermined

description: Amphicoryna sp.
Pl. 3, figs. 6–7
Description: The test wall is calcareous and covered with ridges extending towards the base of each chamber. The test is elongate and uniserial, circular in cross-section, with several inflated globular chambers. Each chamber is not entirely rounded and has a flat base. Approximately twenty ridges run along the terminal chamber. The ridges increase in number towards the final chamber and terminate at the base of each chamber. The aperture is terminal at the end of a spiral neck.
Remarks: The larger terminal chamber is ~ 0.2 mm and the test is 0.6 mm in length. The relative abundance is generally low, forming minor components in some of the core samples.
This species differs from Amphicoryna scalaris in that the chambers are not entirely globular, but more rounded cone-shaped, where each chamber has a flatter base and where the ridges terminate.
Life strategy: The bathymetric range of Amphicoryna spp. is broad, extending from the shelf to abyssal depths. The preferred substrate is mud, under low oxygen (suboxic) (Rögl & Spezzaferri, 2002; Kaminski, 2012) to high oxygen conditions (Milker & Schmiedl, 2012).
Regional occurrence: This species occurs in middle Miocene sediments on the Namibian outer continental shelf, south of the Kunene River mouth (this study).
description: Published as part of Bergh, Eugene W. & Compton, John S., 2022, Taxonomy of Middle Miocene foraminifera from the northern Namibian continental shelf, pp. 1-55 in Zootaxa 5091 (1) on page 19, DOI: 10.11646/zootaxa.5091.1.1, http://zenodo.org/record/5840434
MOESM4 of Pleomorphism and drug resistant cancer stem cells are characteristic of aggressive primary meningioma cell lines
Creators: name: Ishaq Khan
name: Baeesa, Saleh
name: Bangash, Mohammed
name: Hans-Juergen Schulten
name: Alghamdi, Fahad
name: Qashqari, Hanadi
name: Madkhali, Nawal
name: Carracedo, Angel
name: Saka, Mohamad
name: Jamal, Awatif
name: Jaudah Al-Maghrabi
name: AlQahtani, Mohammed
name: Al-Karim, Saleh
name: Damanhouri, Ghazi
name: Saini, Kulvinder
name: Adeel Chaudhary
name: Abuzenadah, Adel
name: Hussein, Deema
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 4: Table S2. Predicted differential pathways generated by Ingenuity Pathway Analysis Software. The transcriptome comparison was carried out for group 1 (Tumors Jed49_MN, Jed36_MN) versus group 2 (Tumors Jed04_MN, Jed18_MN, Jed34_MN, Jed40_MN).
Marginulina obesa Cushman 1923
Creators: name: Bergh, Eugene W.
name: Compton, John S.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Chromista
Foraminifera
Nodosariata
Vaginulinida
Vaginulinidae
Marginulina
Marginulina obesa

description: Marginulina obesa Cushman, 1923a
Pl. 3, figs. 8–9; Pl. 4, fig. 1
Marginulina glabra Brady, 1884, p. 527, pl. 65, figs. 5–7; Flint, 1899, p. 133, pl. 60, fig. 1.
Marginulina glabra var. obesa Cushman, 1923a, p. 128, pl. 37, fig. 1.
Marginulina obesa Barker, 1960, pl. 65, figs. 5–6; LeRoy & Levinson, 1974, p. 8, pl. 4, fig. 3–4; Lowry, 1987, p. 174, pl. 9, fig. 12; Jones, 1994, p. 77, pl. 65, figs. 5–6.
Description: The test wall is calcareous and smooth. The test is elongate, circular in cross-section, initially curved, becoming rectilinear in the later stage. Three inflated chambers increase in size towards the terminal end. The chambers are separated by straight and slightly depressed sutures. The aperture is terminal and radiate.
Remarks: The relative abundance of this species is generally low, forming trace components (<1%) in some of the samples of core 2670. The length of the tests in LeRoy & Levinson (1974) is reported to be 1 mm and a diameter of 0.62 mm. The tests in this study are slightly smaller, measuring up to 0.4 mm in cross section diameter and 0.7 mm in length.
Marginulina glabra has been synonymised with Marginulina obesa (e.g., Holbourn et al., 2013), based on similar descriptions between Terquem (1866), Brady (1884) and Cushman (1923a). Brady (1884) does not distinguish between the variations within the species, where the length and stoutness is concerned. The test should remain inflated and the final chamber as large as at least one third of the test. Confusion might arise with M. glabra that is also described by Parker et al. (1865), but the test of that species is not inflated, is thin and is more elongated, compared to M. obesa and M. glabra described in Brady (1884). M. glabra is now not accepted as a species name and the more elongated form described in Parker et al. (1865) should be synonymised with M. similis in d’Orbigny (1846). The terminal chamber in M. similis is also much more reduced, approximately a quarter in size, compared to the more inflated M. obesa.
Life strategy: The bathymetric distribution of M. obesa is recorded as slope to abyssal (Holbourn et al., 2013). Species of the genus Marginulina are generally shallow-infaunal in environments with variable conditions of low (Bernhard, 1986) to high oxygen (Milker & Schmiedl, 2012).
Global stratigraphic range: This species occurs from the Miocene to Recent (Jones, 1994).
Regional occurrence: M. obesa is documented to occur in middle Miocene sediments on the Namibian outer continental shelf, south of the Kunene River mouth (this study) and in surface sediments along the south coast of South Africa (Lowry, 1987).
description: Published as part of Bergh, Eugene W. & Compton, John S., 2022, Taxonomy of Middle Miocene foraminifera from the northern Namibian continental shelf, pp. 1-55 in Zootaxa 5091 (1) on page 19, DOI: 10.11646/zootaxa.5091.1.1, http://zenodo.org/record/5840434
Dioctophyma renale Goeze
Creators: name: Muniz-Pereira, Luís C.
name: Vieira, Fabiano M.
name: Luque, José L.
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Nematoda
Secernentea
Ascaridida
Dioctophymatidae
Dioctophyma
Dioctophyma renale

description: Dioctophyma renale (Goeze)
Speothos venaticus (Lund), kidney, Mato Grosso (Barros et al. 1990; Vieira et al. 2008a) (CHIOC 169).
description: Published as part of Muniz-Pereira, Luís C., Vieira, Fabiano M. & Luque, José L., 2009, Checklist of helminth parasites of threatened vertebrate species from Brazil, pp. 1-45 in Zootaxa 2123 on page 8, DOI: 10.5281/zenodo.188170
title: Evaluation of Recharge Beneath NRCS Reservoirs in Hale County, Brazos River Basin
Creators: name: Scanlon, Bridget R.
name: Angle, Edward S.
name: Christian, Brent
Publisher: name: The University of Texas at Austin
Year: 2000
Subjects: subject: Groundwater recharge
subject: NRCS reservoirs
subject: Hale County
subject: Texas
subject: Brazos River Basin

description: Preserving, conserving, and optimizing the use of groundwater from the Ogallala aquifer is a critical issue for the Southern High Plains because of continuing demands on groundwater coupled with decreasing groundwater levels. This study evaluates groundwater recharge from Soil Conservation Service (SCS) (currently the Natural Resources Conservation Service) reservoirs to determine if recharge could be enhanced by increasing the storage capacity or by modifying the surfaces of the reservoirs. There are three phases to this study: a technical evaluation, an engineering feasibility study, and a legal and regulatory analysis. This report presents the technical evaluation and includes the results of surface water modeling and field studies on two of the six reservoirs in Running Water Draw in Hale County, Texas. These reservoirs were installed in 1976 and 1982 by SCS for flood control. Under current state law, reservoirs cannot store more than 200 acre-feet of water unless a permit is obtained from the Texas Natural Resource Conservation Commission. The SCS 3 reservoir was dry throughout the study period (March 1999-October 2000). Surface water modeling, based on data from 1950 to 1978, shows SCS 3 had runoff ranging from 1 acre-foot in 1976 to 9,380 acre-feet in 1950. This indicates the reservoirs could store much more water during periods of above-normal precipitation. Under current regulations, a maximum of 1,200 acre-feet from all six reservoirs is available for storage. Currently, two of the six SCS reservoirs in Running Water Draw have obtained permits and installed plugs to increase storage capacity from 200 acre-feet per reservoir to 424 and 4,427 acre-feet (4,851 acre-feet total). If the area experienced a flood similar to the one in 1941, 24,569 acre-feet of surface water would be available for storage. If the highest recorded annual rainfall (1941) were to occur again, 31,353 acre-feet of surface water would be available for recharge.
Additional file 2: of Prolonged acute care and post-acute care admission and recovery of physical function in survivors of acute respiratory failure: a secondary analysis of a randomized controlled trial
Creators: name: Neumeier, Anna
name: Nordon-Craft, Amy
name: Malone, Dan
name: Schenkman, Margaret
name: Clark, Brendan
name: Moss, Marc
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Cell Biology
subject: Immunology
subject: FOS: Clinical medicine

description: Initial discharge location. This describes the initial discharge (home, skilled nursing facility, long-term acute care, rehabilitation facility, hospice, deceased) of the two groups of patients. (DOCX 49Â kb)
Vaginulina legumen
Creators: name: Bergh, Eugene W.
name: Compton, John S.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Chromista
Foraminifera
Nodosariata
Vaginulinida
Vaginulinidae
Vaginulina
Vaginulina legumen

description: Vaginulina legumen (Linnaeus, 1758)
Pl. 4, figs. 2–3
Nautilus legumen Linnaeus, 1758, p.711.
Vaginulina badenensis d’Orbigny, 1846, p. 65, pl. 3, figs. 6–8; Göes, 1894, p. 66, pl. 12, figs. 662–663; Papp & Schmid, 1985, p. 36, pl. 20, figs. 6–11.
Vaginulina legumen Brady, 1884, p. 580, pl. 66, figs. 13–15; Bagg, 1912, p. 63, pl. XVIII, fig. 6–7; Sandidge, 1932, p. 355, pl. XXXI, fig. 15; Loeblich & Tappan, 1988, pl. 454, figs. 15–17.
Description: The test wall is calcareous and perforate. The test is large, elongate, compressed, uniserial and lenticular in cross-section. The initial end may be with or without a spine. The sutures are straight, slightly thickened and near horisontal. The aperture is pronounced, terminal and radiate.
Remarks: The relative abundance is generally low, comprising trace components (<1%) in some of the samples of core 2670. The length of the figured specimen in Sandidge (1932) is 0.7 mm. The tests in this study are larger than those in Sandidge (1932), measuring up to 0.4 mm in cross section and 2 mm in length.
There are variations in the tests presented in the synonymies of Vaginulina legumen in its length, curvature and breadth, in relation to its length. For example, the tests of V. badenensis figured in Göes (1894) appear to be more curved with the terminal end broader than the initial chambers. The figured specimens in Göes (1894) are also broader than those in d’Orbigny (1846). V. badenensis has been synonymised with V. legumen. The tests from this study closely resembles that of Papp and Schmid (1985) from the Vienna Basin. The figured test from this study (pl. 4, fig. 2) appears to be smoother, with near horisontal striae that are not that apparent in electron microscopy, but may have been worn away. Other specimens also exhibited near horisontal striae.
Life strategy: Vaginulina legumen is infaunal and adapted to suboxic conditions (Pezelj et al., 2013 and references therein).
Global stratigraphic range: This species is recorded to occur from the Triassic to Recent (Bagg, 1912; Sandidge, 1932).
Regional occurrence: Vaginulina legumen occurs in middle Miocene sediments on the Namibian outer continental shelf, south of the Kunene River mouth (this study).
description: Published as part of Bergh, Eugene W. & Compton, John S., 2022, Taxonomy of Middle Miocene foraminifera from the northern Namibian continental shelf, pp. 1-55 in Zootaxa 5091 (1) on page 20, DOI: 10.11646/zootaxa.5091.1.1, http://zenodo.org/record/5840434
Eustrongylides
Creators: name: Muniz-Pereira, Luís C.
name: Vieira, Fabiano M.
name: Luque, José L.
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Nematoda
Secernentea
Ascaridida
Dioctophymatidae
Eustrongylides

description: Eustrongylides sp.
Steindachneridion parahybae (Steindachner), unspecified site of infection, São Paulo (Vicente et al. 1985).
description: Published as part of Muniz-Pereira, Luís C., Vieira, Fabiano M. & Luque, José L., 2009, Checklist of helminth parasites of threatened vertebrate species from Brazil, pp. 1-45 in Zootaxa 2123 on page 8, DOI: 10.5281/zenodo.188170
title: Predictions of Groundwater Levels and Spring Flow in Response to Future Pumpage and Potential Future Droughts in the Barton Springs Segment of the Edwards Aquifer
Creators: name: Scanlon, Bridget R.
name: Mace, Robert E. (Robert Earl), 1967-
name: Dutton, Alan R.
Publisher: name: The University of Texas at Austin
Year: 2000
Subjects: subject: Groundwater levels
subject: spring flow
subject: Barton Springs
subject: Edwards Aquifer
subject: Texas
subject: water resources management

description: A two-dimensional numerical groundwater-flow model was developed for the Barton Springs segment of the Edwards aquifer to evaluate groundwater availability and predict water levels and spring flow in response to increased pumpage and droughts from 2000 through 2050. A steady-state model was developed on the basis of average recharge for a 20-yr period (1979 through 1998) and pumpage values for 1989. Hydraulic conductivity zones (10) were adjusted to obtain good agreement between measured and simulated hydraulic heads. Zones of hydraulic conductivity ranged from 1 to 1,000 ft/d. We conducted transient simulations using recharge and pumping data for a 10-yr period from 1989 through 1998 that includes periods of low and high water levels. Good agreement was found between measured and simulated flow at Barton Springs (root mean square error [RMSE, average of squared differences in measured and simulated discharges] 17 cfs) and between measured and simulated water levels in many of the monitoring wells (mean RMSE 40 ft). The simulation results overestimate spring discharge by about 10 cfs during low flow periods. To assess the impact of future pumping and potential future droughts on groundwater availability, we conducted transient simulations using extrapolated pumpage for a 10-yr period (2041 through 2050) and using average recharge for a 3-yr period and recharge from the 1950s drought for the remaining 7 yr. Results for this scenario predict that flow in Barton Springs will become very low ( 4 cfs) toward the end of the drought. Because of the bias in the simulation results, the combination of drought and future pumpage could result in no discharge at Barton Springs. Additional scenarios were simulated that included current pumpage and no pumpage. These simulations indicate that with current pumpage, spring discharge will decrease to levels similar to those calculated for the end of the 1950s drought (11 cfs). No pumpage resulted in discharges as low as 17 cfs. Actual flows, which may be about 7 cfs because of the bias in the simulation results, indicate that drought conditions similar to those of the 1950s will require no pumpage if spring discharges similar to those of the 1950s are to be maintained.
Vaginulina undetermined
Creators: name: Bergh, Eugene W.
name: Compton, John S.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Chromista
Foraminifera
Nodosariata
Vaginulinida
Vaginulinidae
Vaginulina
Vaginulina undetermined

description: Vaginulina sp.
Pl. 4, figs. 4–5
Description: The wall is calcareous and perforate. The test is elongate, compressed, uniserial and lenticular in cross-section. The sutures are slightly flush. The initial chambers are broad, narrowing in later chambers, with the terminal chamber broadened and more pronounced than the middle chambers. The aperture is pronounced, terminal and radiate.
Remarks: The relative abundance is generally low, forming trace components (<1%) in some of the samples of core 2670. The tests of Vaginulina sp. measure up to 0.25 mm in cross section and 1 mm in length.
This species resembles V. legumen, but has more basal spines (up to five). One central longer spine is preserved and four spines at each end are also located at the base of the test. The terminal chamber also appears slightly more inflated in relation to the earlier chambers and in relation to V. legumen.
Life strategy: Species of the genus Vaginulina are generally infaunal (Jenkins, 1993).
Regional occurrence: This species occurs in middle Miocene sediments on the Namibian outer continental shelf, south of the Kunene River mouth (this study).
description: Published as part of Bergh, Eugene W. & Compton, John S., 2022, Taxonomy of Middle Miocene foraminifera from the northern Namibian continental shelf, pp. 1-55 in Zootaxa 5091 (1) on page 20, DOI: 10.11646/zootaxa.5091.1.1, http://zenodo.org/record/5840434
MOESM4 of Pleomorphism and drug resistant cancer stem cells are characteristic of aggressive primary meningioma cell lines
Creators: name: Ishaq Khan
name: Baeesa, Saleh
name: Bangash, Mohammed
name: Hans-Juergen Schulten
name: Alghamdi, Fahad
name: Qashqari, Hanadi
name: Madkhali, Nawal
name: Carracedo, Angel
name: Saka, Mohamad
name: Jamal, Awatif
name: Jaudah Al-Maghrabi
name: AlQahtani, Mohammed
name: Al-Karim, Saleh
name: Damanhouri, Ghazi
name: Saini, Kulvinder
name: Adeel Chaudhary
name: Abuzenadah, Adel
name: Hussein, Deema
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 4: Table S2. Predicted differential pathways generated by Ingenuity Pathway Analysis Software. The transcriptome comparison was carried out for group 1 (Tumors Jed49_MN, Jed36_MN) versus group 2 (Tumors Jed04_MN, Jed18_MN, Jed34_MN, Jed40_MN).
Dipetalonema caudispina Molin
Creators: name: Muniz-Pereira, Luís C.
name: Vieira, Fabiano M.
name: Luque, José L.
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Nematoda
Secernentea
Spirurida
Setariidae
Dipetalonema
Dipetalonema caudispina

description: Dipetalonema caudispina (Molin)
Ateles paniscus (Linnaeus), abdominal cavity, Pará (Freitas 1964) (CHIOC 9027, 15438a̅k). Brachyteles arachnoides (Geoffroy), unspecified site of infection, Rio de Janeiro (Freitas 1943; Notarnicola et al. 2008).
Leontopithecus rosalia (Linnaeus), unspecified site of infection, Pará (Freitas 1943; Notarnicola et al. 2008).
description: Published as part of Muniz-Pereira, Luís C., Vieira, Fabiano M. & Luque, José L., 2009, Checklist of helminth parasites of threatened vertebrate species from Brazil, pp. 1-45 in Zootaxa 2123 on page 8, DOI: 10.5281/zenodo.188170
title: Landscape Evolution of Eagle Flat and Red Light Basins, Chihuahuan Desert, South-Central Trans-Pecos Texas
Creators: name: Langford, Richard P.
Publisher: name: The University of Texas at Austin
Year: 1993
Subjects: subject: landscape evolution
subject: basins
subject: Chihuahuan Desert
subject: Trans-Pecos Texas

description: This report documents the development of the landscape near the site proposed for the Texas low-level radioactive waste repository, located in southern Hudspeth County, Texas. It documents the geomorphic, depositional, and erosional features in the area. The Texas Legislature designated an approximately 400 square mile (1,035 square kilometer) area as the Eagle Flat Study Area, within which the site was to be selected. The study area consists of six U.S. Geological Survey 7.5-minute topographic quadrangles between the towns of Sierra Blanca and Van Horn, Texas. The six-quadrangle Eagle Flat Study Area contains a large part of Eagle Flat Basin and a smaller area in Red Light Draw. The Eagle Flat Study Area contains parts of the Belson and Sacramento subsections of the Mexican Highlands section in the Basin and Range physiographic province. The Belson subsection is characterized by broad, internally drained alluvial basins, interrupted by rugged, discontinuous fault-block mountains. The mountains are composed of Cretaceous and Permian carbonate rocks with scattered areas of Tertiary intrusives and volcanics, older Paleozoic shata, and Precambrian metamorphic rocks. In the Belson subsection, the uplands make up about one-fifth of the area, whereas uplands make up 27 percent of the entire Eagle Flat Study Area. The Eagle Flat and Red Light Draw Basins, in the Belson subsection, are floored by Pliocene and Pleistocene alluvial sands and muds. The Sacramento subsection is represented by the Diablo Plateau in the northern part of the study area. This plateau is an upland area of Cretaceous hills separated by broad alluvial valleys with thin sedimentary cover. The Eagle Flat Study Area contains the four geomorphic regions: the mountainous region, the upland region, the basin floor, and the Sacramento Plateau.
Additional file 1 of Minimal tool set for a prokaryotic circadian clock
Creators: name: Schmelling, Nicolas
name: Lehmann, Robert
name: Paushali Chaudhury
name: Beck, Christian
name: Sonja-Verena Albers
name: Axmann, Ilka
name: Wiegard, Anika
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Supplement 1. This file contains all supplementary figures and tables, except of Table S5. (PDF 9260 kb)
GOALS AND DUTIES OF THE ORGANIZATION AND DEVELOPMENT OF TOURISM OF THE YANGI MUSEUM IN UZBEKISTAN
Creators: name: Yulduz Pirnazarovna Urunbaeva, Samarkand Institute of Economics and Service, PhD, docent
Publisher: name: Zenodo
Year: 2024

description: the  purpose  and  tasks  of  organizing  and  developing  new  museum tourism  in  the  national  tourism  of  Uzbekistan  are  presented  in  the  article.  Also, proposals for the development of museum tourism are recommended.
Glandulina laevigata
Creators: name: Bergh, Eugene W.
name: Compton, John S.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Chromista
Foraminifera
Nodosariata
Polymorphinida
Glandulinidae
Glandulina
Glandulina laevigata

description: Glandulina laevigata (d’Orbigny, 1826)
Pl. 4, figs. 6a–b
Nodosaria (Glandulina) laevigata var. ovata d’Orbigny, 1826, p. 252, pl. 10, fig. 1–3; Brady 1884, p. 490, pl. 61, fig. 20–22; Cushman, 1921, p. 185, pl. 33, fig. 1; Cushman & Applin, 1926, p. 169, pl. 7, figs. 12–13.
Glandulina laevigata d’Orbigny, 1846, p. 29, pl. 1, fig. 4–5; Sandidge, 1932, p. 360, pl. XXXII, fig. 15.
Glandulina laevigata var. ovata Ellisor, 1933, pl. 2, fig. 6.
Description: The test wall is calcareous and smooth. The test shape is ovate, globular, tapering at each end and circular in transverse section with few chambers increasing toward the apertural end. The final chamber is the largest, comprising nearly two thirds of the test volume. The sutures are fine and flush. The aperture is radiate and projects slightly from the larger last chamber.
Remarks: Few tests comprising <1% of the total foraminiferal assemblage in core 2670 were recorded. Tests are moderate to large in size, ranging from 0.5 mm to nearly 1 mm in cross-section and 0.75 to 1.2 mm in length. The figured specimen of Glandulina laevigata in Sandidge (1932) is 0.5 mm in length.
This species is synonymised with Nodosaria (Glandulina) laevigata and Nodosaria laevigata (Loeblich & Tappan, 1988).
Life strategy: This species is infaunal and tolerant of low oxygen conditions (Gupta, 1993).
Global stratigraphic range: Glandulina laevigata occurs from the Cretaceous to Recent (Sandidge, 1932).
Regional occurrence: This species occurs in middle Miocene sediments on the Namibian outer continental shelf, south of the Kunene River mouth (this study).
description: Published as part of Bergh, Eugene W. & Compton, John S., 2022, Taxonomy of Middle Miocene foraminifera from the northern Namibian continental shelf, pp. 1-55 in Zootaxa 5091 (1) on page 21, DOI: 10.11646/zootaxa.5091.1.1, http://zenodo.org/record/5840434
title: Rock-Fabric/Petrophysical Classification of Carbonate Pore Space for Reservoir Characterization
Creators: name: Lucia, F. Jerry
Publisher: name: The University of Texas at Austin
Year: 1993
Subjects: subject: petroleum
subject: reservoirs
subject: carbonate rocks
subject: petrophysics

description: The goal of reservoir characterization is to describe the spatial distribution of petrophysical parameters such as porosity, permeability, and saturation. Wireline logs, core analyses, production data, pressure buildups, and tracer tests provide quantitative measurements of petrophysical parameters in the vicinity of the wellbore. These wellbore data must be integrated with a geologic model to display the petrophysical properties in three-dimensional space. Studies that relate rock fabric to pore-size distribution, and thus to petrophysical properties, are key to quantification of geologic models in numerical terms for input into computer simulators. Geologic models are generally based on observations that are interpreted in terms of depositional environments and sequences. In the subsurface, cores and wireline logs are the main source of data for these interpretations. Engineering models are based on wireline log calculations and average rock properties from core analyses. Numerical engineering data and interpretive geologic data are joined at the rock fabric level because the pore structure is fundamental to petrophysical properties, and the pore structure is the result of spatially distributed depositional and diagenetic processes. The purpose of this report is to (1) describe the relationship between carbonate rock fabrics and petrophysical properties, (2) suggest a generic petrophysical classification of carbonate pore space, and (3) determine the important geologic parameters to be mapped to allow accurate quantification of carbonate geologic models.
Culicoides niphanae Wirth and Hubert
Creators: name: Li, Jia-Hui
name: Gopurenko, David
name: Cai, Du-Cheng
name: Yang, Ye-Meng
name: Hu, Rong
name: Thepparat, Arunrat
name: Wardhana, April H.
name: Kim, Heung-Chul
name: Klein, Terry A.
name: Kim, Myung-Soon
name: Bellis, Glenn A.
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Ceratopogonidae
Culicoides
Culicoides niphanae

description: Culicoides niphanae Wirth and Hubert
(Fig. 3)
Culicoides niphanae Wirth and Hubert 1989:316
Non-type material examined. People’s Republic of China, Hainan: Dongzhaigang Mangrove Reserve nursery, 19.85°N; 110.40°E, 1m, Lt Tp, 14.Oct.2015, J-H Li & D-C Cai (2 females).
Diagnosis. Females: The only species in the Ornatus group with the following suite of characters: bare eyes, SCo distribution 1–12, spermathecae with long, straight necks and a sclerotized spermathecal ring.
Biology. Unknown, but all collection data indicate an association with mangroves or sea shores.
Distribution. This species is known from Thailand, Indonesia, Malaysia, Philippines, Borneo (Sabah, Sarawak), and the People’s Republic of China (new record).
Remarks. This species aligns with the Pictipennis section of C. Subg. Oecacta in the keys of Yu et al. (2005) and to couplet 40 in the key to the Pictipennis section but does not match either of the species (C. corti Causey or C. fukiensis) at that couplet. Of the species listed in the Pictipennis section, subgenus Oecacta, reported from China by Yu et al. (2005) that have a wing pattern similar to C. niphanae, all but one bear SCo on segment 13 which is inconsistent with C. niphanae. The remaining species, C. distinctus Sen & Das Gupta, has a SCo distribution of 1,5–8, which is inconsistent with C. niphanae.
Our two female Dongzhaigang specimens run cleanly to C. niphanae in the key of Wirth & Hubert (1989) and match their description of this species, although appear to lack a sclerotized ring on the spermathecal duct which should be present in this species. Until further material is available to confirm the absence of this ring, we refer these specimens to C. niphanae. DNA barcodes of two Dongzhaigang specimens were allocated to a novel DNA barcode BIN:ADB6248 (Table 2). No prior DNA barcode records are available for this species, which differed by>10.7 % (D NC) to the nearest congeneric.
description: Published as part of Li, Jia-Hui, Gopurenko, David, Cai, Du-Cheng, Yang, Ye-Meng, Hu, Rong, Thepparat, Arunrat, Wardhana, April H., Kim, Heung-Chul, Klein, Terry A., Kim, Myung-Soon & Bellis, Glenn A., 2017, Culicoides Latreille biting midges (Diptera: Ceratopogonidae) of the Dongzhaigang mangrove forest, Hainan Province, China, pp. 49-60 in Zootaxa 4227 (1) on pages 53-54, DOI: 10.11646/zootaxa.4227.1.2, http://zenodo.org/record/266365
Additional file 1 of Minimal tool set for a prokaryotic circadian clock
Creators: name: Schmelling, Nicolas
name: Lehmann, Robert
name: Paushali Chaudhury
name: Beck, Christian
name: Sonja-Verena Albers
name: Axmann, Ilka
name: Wiegard, Anika
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Supplement 1. This file contains all supplementary figures and tables, except of Table S5. (PDF 9260 kb)
Spectral properties of Levy Rosenzweig-Porter model via supersymmetric approach
Creators: name: Safonova, Elizaveta
name: Feigelman, Mikhail
name: Kravtsov, Vladimir
Publisher: name: arXiv
Year: 2024
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Mathematical Physics (math-ph)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: By using the Efetov's super-symmetric formalism we computed analytically the mean spectral density $ρ(E)$ for the Lévy and the Lévy -Rosenzweig-Porter random matrices which off-diagonal elements are strongly non-Gaussian with power-law tails. This makes the standard Hubbard-Stratonovich transformation inapplicable to such problems. We used, instead, the functional Hubbard-Stratonovich transformation which allowed to solve the problem analytically for large sizes of matrices. We show that $ρ(E)$ depends crucially on the control parameter that drives the system through the transition between the ergodic and the fractal phases and it can be used as an order parameter.
description: 16 pages, 10 figures
Dipetalonema gracilis Rudolphi
Creators: name: Muniz-Pereira, Luís C.
name: Vieira, Fabiano M.
name: Luque, José L.
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Nematoda
Secernentea
Spirurida
Setariidae
Dipetalonema
Dipetalonema gracilis

description: Dipetalonema gracilis (Rudolphi)
Ateles paniscus (Linnaeus), abdominal cavity, unspecified locality (Freitas 1964).
Brachyteles arachnoides (Geoffroy), abdominal cavity, unspecified locality (Diesing 1851). Lagothrix lagotricha (Humboldt), abdominal cavity, unspecified locality (Freitas 1964; Vicente et al. 1997). Leontopithecus chrysopygus (Mikan), abdominal cavity, unspecified locality (Diesing 1851). Leontopithecus rosalia (Linnaeus), abdominal cavity, unspecified locality (Diesing 1851). Saguinus bicolor (Spix), abdominal cavity, unspecified locality (Diesing 1851).
description: Published as part of Muniz-Pereira, Luís C., Vieira, Fabiano M. & Luque, José L., 2009, Checklist of helminth parasites of threatened vertebrate species from Brazil, pp. 1-45 in Zootaxa 2123 on page 8, DOI: 10.5281/zenodo.188170
Bolivina alata
Creators: name: Bergh, Eugene W.
name: Compton, John S.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Chromista
Foraminifera
Globothalamea
Rotaliida
Bolivinitidae
Bolivina
Bolivina alata

description: Bolivina alata (Seguenza, 1862)
Pl. 4, fig. 7
Vulvulina alata Seguenza, 1862, p. 115, pl. 2, fig. 5.
Bolivina alata Cushman, 1937, p. 106, pl. 13, figs. 3–11; Cushman & Todd, 1945, p. 42, pl. 6, fig. 25; Renz, 1948, p. 116, pl. 6, fig. 26; pl. 12, fig. 12; Lowry, 1987, p. 280, pl. 18, figs. 3a–b; Bolli et al., 1994, p. 339, figs. 78.4–78.5.
Brizalina alata van Marle, 1991, p. 166, pl. 17, figs. 1–2; Jones, 1994, p. 58, pl. 53, figs. 2–4; Yassini & Jones, 1995, p. 131, figs. 516–517; Robertson, 1998, p. 120, pl. 47, figs. 1–2; Holbourn et al., 2013, p. 76.
Description: The test wall is calcareous and coarsely perforate. The test is small, elongate, biserial, strongly compressed and elliptical in cross-section. The chambers increase rapidly and become more inflated towards the apertural end, slightly overlapping the previous chambers. Chambers have a downward pointing spine located at the base, giving a serrated edge to the test margin. A peripheral keel surrounds the test. The sutures are slightly depressed and curved. The aperture is loop-shaped and extends up the terminal chamber.
Remarks: Specimens were moderately abundant (<10%) in all cores discussed in this study. The tests are small, measuring 0.2 mm in width and 0.6 mm in length.
Life strategy: The genus Bolivina is infaunal, unattached and prefers muddy sediments in dysoxic conditions (Kaminski et al., 2002). The species Bolivina alata has a shelf distribution (Holbourn et al., 2013).
Global stratigraphic range: This species occurs from the Miocene to Recent (Jones, 1994).
Regional occurrence: Bolivina alata is recorded in middle Miocene sediments on the Namibian outer continental shelf, south of the Kunene River mouth (this study) and in surface sediments on the southwestern continental shelf of Africa, north of the Orange River mouth (Lowry, 1987).
description: Published as part of Bergh, Eugene W. & Compton, John S., 2022, Taxonomy of Middle Miocene foraminifera from the northern Namibian continental shelf, pp. 1-55 in Zootaxa 5091 (1) on page 21, DOI: 10.11646/zootaxa.5091.1.1, http://zenodo.org/record/5840434
title: State Lands Energy Resource Optimization Project - 1992 Annual Progress Report
Creators: name: Major, R. P.
Publisher: name: The University of Texas at Austin
Year: 1993
Subjects: subject: optimization
subject: Texas State Lands

description: Project SLERO, for which The University of Texas at Austin Bureau of Economic Geology is the lead contractor and coordinating institution, is a five-university consortium study of hydrocarbon resources on Texas State Lands. The five universities are The University of Texas at Austin, Texas A&M University, the University of Houston, Texas Tech University, and Lamar University, and the entire program is aided by the cooperation of the Texas General Land Office. This is a four-year project funded at the level of $16 million, $8 million of which was granted by the Office of the Governor of Texas and $8 million of which is matched by participating academic institutions. Project personnel include geologists, petroleum engineers, geophysicists, and chemists. The interdisciplinary nature of this project is directed toward a more thorough understanding of the geologic controls on production and the development of appropriate recovery technologies to address the specific needs of State Lands reservoirs. Transfer of these technologies to industry, in particular to independent operators, is expected to result in increased efficiency of hydrocarbon recovery from State Lands and increased revenue to the Texas Public School Fund. The project is divided into three parts: (1) play analysis and resource assessment, (2) reservoir characterization, and (3) development of advanced extraction technology. The play analysis and resource assessment part of this research program involves dividing the oil and gas fields on Texas State Lands into geologically based families, such that fields with similar depositional histories, trapping styles, production efficiencies, and extraction difficulties are grouped into "plays." Play analysis provides the framework for making a quantitative assessment of the remaining resources on State Lands. Importantly, even maturely developed oil reservoirs may still contain substantial volumes of both "mobile" oil (oil that is movable at reservoir conditions and that can be conventionally recovered) and "residual" oil (oil that requires expensive and technically complex reservoir stimulation). The relative amounts of these resource types vary among the geologically based plays. Quantifying the amounts of these two types of oil on State Lands, as well as quantifying the remaining natural gas resource, is critical both for designing field development programs and for optimizing the recovery economics of Texas hydrocarbon resources and is the focus of the resource assessment task.
title: Review of the Rose Run Sandstone Play of Ohio: Geological Framework and Exploration/Production Techniques, Challenges, and Opportunities - Topical Report (April 1993-June 1993)
Creators: name: Burn, Mark J.
Publisher: name: The University of Texas at Austin
Year: 1993
Subjects: subject: petroleum
subject: sandstone
subject: exploration
subject: production
subject: Rose Run Sandstone
subject: Ohio

description: The Upper Cambrian Rose Run sandstone of Ohio currently forms the most active exploratory hydrocarbon play in the Appalachian Basin. The Rose Run comprises a 125-ft-thick, interstratified siliciclastic/carbonate unit that was deposited in peritidal to shallow-subtidal marine environments. Deep-seated faults and folds influenced both Rose Run deposition and diagenesis. Rose Run reservoirs consist of sandstone bodies, 10 to 30 ft thick. Dolomite forms the predominant sandstone cement. The most important feature controlling the distribution of Rose Run reservoirs is the Knox unconformity. Remnants of Rose Run strata overlain by Beekmantown dolomite form the primary targets for exploration, and 2-D seismic data play a critical role in their identification. Other exploration techniques include mapping thickness variations of the shallower Packer Shell and Wells Creek intervals. Drilling depths for the play range from 3,200 to 7,000 ft, and drilling, completion, and pipeline hookup costs range from $200,000 to $300,000 per well. Average well-deliverability rates are 500 Mcf per day, and average cumulative production per well is estimated at 1 Bcf. Challenges facing Rose Run operators include seismic interpretation and successful completion and cement operations. Research opportunities include evaluating external reservoir geometry and intra-reservoir permeability variation.
Additional file 1 of Common and phylogenetically widespread coding for peptides by bacterial small RNAs
Creators: name: Friedman, Robin C.
name: Kalkhof, Stefan
name: Doppelt-Azeroual, Olivia
name: Mueller, Stephan A.
name: Chovancovรก, Martina
name: Bergen, Martin Von
name: Schwikowski, Benno
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Supplemental figures. (PDF 1870 kb)
Chorismagrion Morton 1914, nov. gen.
Creators: name: Morton, Kenneth J.
Publisher: name: Zenodo
Year: 1914
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Odonata
Synlestidae
Chorismagrion

description: CHORISMAGRION,
nov. gen.
Nodus about one-third of the distance between the base of the Wing and the distal side of the pterostigma. Basal side of the quadrilateral absent in fore-wings as in Hemiphlebia. In hindwings, anterior side of the quadrilateral about 2/5 the length of the posterior.
A* separates from the inner margin distad to Cuq at above the level of the costo-distal angle of the quadrilateral. The two Anq placed at nearly equal distance from each other and from the base of the wing and nodus respectively. Cuq placed nearer l Anq, about 1/3 of the distance between 1 and 2 Anq. Cu1 arched at the base. M3 from or very near the sub-nodus, Rs at about 4 Pnq in fore-wings, and 3 Pnq in hind-wings. M2 three cells further* 1a about two cells still further (but rather unstable ranging from between one-third and one-half the distance between the nodus and the proximal side of the pterostigma). Supplementary sectors absent.
Second joint of antennae rather more than twice the length of the basal joint, the third longer than the ﬁrst two together.
Legs slender with rather long and ﬁne spines; claws long with a well-deﬁned tooth. Superior appendages forcipate. Ligula cleft for about 1/3 of its length, the lobes rather narrowly separate, tapering but blunt at the apex.
description: Published as part of Morton, Kenneth J., 1914, A remarkable new genus and new species of Odonata, of the legion Podagrion, Selys, from north Queensland, pp. 169-172 in Transactions Entomological Society London 1914 on page 170, DOI: 10.5281/zenodo.3246288
Dipetalonema
Creators: name: Muniz-Pereira, Luís C.
name: Vieira, Fabiano M.
name: Luque, José L.
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Nematoda
Secernentea
Spirurida
Setariidae
Dipetalonema

description: Dipetalonema sp.
Alouatta fusca (Geoffroy Saint-Hilaire), abdominal cavity, Espírito Santo (Vicente et al. 1992; Vicente et al. 1997) (CHIOC 29524).
description: Published as part of Muniz-Pereira, Luís C., Vieira, Fabiano M. & Luque, José L., 2009, Checklist of helminth parasites of threatened vertebrate species from Brazil, pp. 1-45 in Zootaxa 2123 on page 8, DOI: 10.5281/zenodo.188170
Bolivina reticulata Hantken 1875
Creators: name: Bergh, Eugene W.
name: Compton, John S.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Chromista
Foraminifera
Globothalamea
Rotaliida
Bolivinitidae
Bolivina
Bolivina reticulata

description: Bolivina reticulata Hantken, 1875
Pl. 4, figs. 8a–b
Bolivina reticulata Hantken, 1875, p. 65, pl. 15, fig. 6; Fenero et al., 2012, p. 292, fig. 5.7; Valchev et al., 2013, p. 95, pl. 1, fig. 16.
Brizalina subreticulata Jones, 1994, p. 59, fig. 30–31.
Description: The test wall is calcareous and microperforate. The test is small, broad, biserial, triangular-ovoid in shape and elliptical in cross-section. The test is less than twice as long as it is wide. Irregular, reticulate, interwoven costae cover the entire test, giving a reticulate appearance to the test. The aperture is slit-like and situated at the base of the terminal chamber.
Life strategy: This species is infaunal (Drinia et al., 2007), unattached and prefers muddy sediments under dysoxic conditions (Kaiho, 1994). The bathymetric distribution of this species is recorded to be from the inner shelf to slope (Murray, 2006).
Remarks: The relative abundance is generally low, comprising trace components (<1%) in the samples of core 2670. The tests are small, measuring 0.2 mm in width and 0.35 mm in length.
Global stratigraphic range: This species occurs from the Oligocene to Recent (Fenero et al., 2012).
Regional occurrence: Bolivina reticulata is recorded in middle Miocene sediments on the Namibian outer continental shelf, south of the Kunene River mouth (this study).
description: Published as part of Bergh, Eugene W. & Compton, John S., 2022, Taxonomy of Middle Miocene foraminifera from the northern Namibian continental shelf, pp. 1-55 in Zootaxa 5091 (1) on page 22, DOI: 10.11646/zootaxa.5091.1.1, http://zenodo.org/record/5840434
title: State Lands Energy Resource Optimization Project - Final Report
Creators: name: Major, R. P.
Publisher: name: The University of Texas at Austin
Year: 1993
Subjects: subject: optimization
subject: Texas State Lands

description: Project SLERO, for which The University of Texas at Austin Bureau of Economic Geology was the lead contractor and coordinating institution, was a five-university consortium study of hydrocarbon resources on Texas State Lands. The five universities are The University of Texas at Austin, Texas A&M University, the University of Houston, Texas Tech University, and Lamar University, and the entire program was aided by the cooperation of the Texas General Land Office. This 4-year project was funded through the Office of the Governor of Texas. Project personnel included geologists, petroleum engineers, geophysicists, and chemists. The interdisciplinary nature of this project was directed toward a more thorough understanding of the geologic controls on production and the development of appropriate recovery technologies to address the specific needs of State Lands reservoirs. Transfer of these technologies to industry, in particular to independent operators, is expected to result in increased efficiency of hydrocarbon recovery from State Lands and increased revenue to the Texas Public School Fund. The project was divided into three parts: (1) play analysis and resource assessment, (2) reservoir characterization, and (3) development of advanced extraction technology.