cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
UDDAG MINING APPROACH FOR CLOSED AND MAXIMAL FREQUENT ITEMSETS
Creators: name: Shanmugam, Alagappan
Publisher: name: Zenodo
Year: 2009
Subjects: Sequential Pattern Mining
Pattern Growth
UDDAG
Closed Frequent Itemsets
Maximal Frequent Itemsets
Data Mining
Scalability
PrefixSpan
Spade
LapinSpam
Fuzzy Sequential Pattern Mining
Java
Pattern Discovery

description: Title: UDDAG Mining Approach for closed and maximal frequent itemsets

Abstract:Sequential pattern mining is a crucial data mining task aimed at detecting frequent subsequences in large sequence databases. One of the key techniques for sequential pattern mining is pattern growth, where patterns are extended by recursively projecting databases. However, traditional pattern growth methods, such as PrefixSpan, grow patterns unidirectionally along the suffix of detected patterns, resulting in inefficient mining due to multiple recursion levels.

This paper proposes a novel approach to sequential pattern mining using the UpDown Directed Acyclic Graph (UDDAG), a new data structure that enables bidirectional pattern growth. Unlike traditional methods, UDDAG supports growing patterns from both ends, allowing for faster and more efficient pattern discovery. By reducing the number of recursion levels required to detect a length-k pattern, UDDAG significantly accelerates the pattern growth process. Specifically, it can detect a length-k pattern in log2(k+1) recursion levels, making it much faster than traditional unidirectional growth methods.

The UDDAG-based approach demonstrates superior scalability, often outperforming traditional algorithms such as PrefixSpan by an order of magnitude in scalability tests. In addition, UDDAG performs comparably in terms of memory usage to PrefixSpan but requires less memory than Spade and LapinSpam, making it more efficient for large-scale datasets.

Beyond the basic pattern mining, this paper extend the UDDAG approach to mine closed and maximal frequent itemsets, which offer a more compact representation of frequent itemsets, significantly reducing the number of patterns discovered. The mining of closed frequent itemsets is especially important for reducing redundant patterns while retaining all relevant support information. Additionally, the concept of maximal frequent itemsets, which represent itemsets with no frequent supersets, is incorporated to further improve the efficiency of mining.

This paper also explore the performance of these algorithms under varying minimum support (minSup) thresholds and sequence counts (C). The paper discusses how UDDAG scales with different sequence sizes and its potential for handling more complex mining tasks.

In future work, the plan is to extend the UDDAG mining technique to fuzzy sequential pattern mining, enabling the discovery of sequential patterns in numerical data by using fuzzy sets and fuzzy intervals, which will allow more flexible handling of data without losing crucial information through conversion.
Additional file 8: Table S1. of The evolution of heat shock protein sequences, cis-regulatory elements, and expression profiles in the eusocial Hymenoptera
Creators: name: Nguyen, Andrew
name: Gotelli, Nicholas
name: Cahan, Sara
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Nucleotide sequences used to characterize the molecular evolution of heat shock proteins. (DOCX 138 kb)
Additional file 1: of Viewing alcohol warning advertising reduces urges to drink in young adults: an online experiment
Creators: name: Stautz, Kaidy
name: Marteau, Theresa
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Supplementary material S1. Content analysis of participants’ understanding of the term ‘Drink Responsibly’. (DOCX 13 kb)
Scolopendra italica C. L. Koch 1836
Creators: name: Doménech, Carles
name: Nagel, Peter
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Chilopoda
Scolopendromorpha
Scolopendridae
Scolopendra
Scolopendra italica

description: Scolopendra italica C. L. Koch, 1836
The name Scolopendra italica C. L Koch, 1836 is depicted with the corrected date “1836” instead of the widely used date “1837”. Gervais (1837) seems to be the first author who cited the original description of S. italica correctly (in Koch, Deutschl., Crust., Myr., Arach., Heft 9, species no. 1), although without date. The correct reference of the original description was also given by Koch himself (Koch 1847) with equal ranking of both Hefte as “9. (142.) 1.”, and Koch (1863b) as “Deutschl. Crustaceen, Arachniden und Myriapoden Heft 9”, neither of them dated.
The date “1836” together with the reference to Heft 9 of the Koch series was only used recently (1 Feb 2021) for the Zoobank record (http://zoobank.org/NomenclaturalActs/3c684667-fc35-4942-bbe9-d2462fb1d5f8, and http:// zoobank.org/References/3e59cf22-15c6-49d4-9724-f9692847f2f1) last accessed in 23 th january of 2022).
Original description:
Similar to S. clavipes (see reasoning above), S. italica was originally described on 1 st October in Koch C. L. (1836a) (precedence), and, simultaneously, in Koch (1836b) (subordinated).
Scolopendra italica C. L Koch., 1836 [1 Oct.]. Index Tab. 1, Plate 9.1., Text headed 9.1 [2 pp., second page unpaginated] – In: Koch, C.L. (1836a). Deutschlands Crustaceen, Myriapoden und Arachniden. Ein Beitrag zur deutschen Fauna. [Herausgegeben von Dr. Herrich-Schäffer] [N.B.: This statement “Edited by Dr. Herrich-Schäffer“ is true for the whole Koch series, however printed only on some title pages]. 9 tes Heft, 24 plates and associated letterpress. Regensburg: Fr. Pustet.
The differences between the parallel published, corresponding Hefte of the Koch series and the Herrich-Schäffer series were described by Nagel & Grieder (2019, p. 39). They are also present between Heft 9 and 142.
The currently accepted (valid) name for S. italica C. L. Koch, 1836 is Scolopendra cingulata Latreille, 1829 (see Bonato et al. 2016, founded on Newport 1845, p. 388, see also urn:lsid:zoobank.org:act: 3C684667-FC35- 4942-BBE9-D2462FB1D5F8, http://zoobank.org/NomenclaturalActs/3c684667-fc35-4942-bbe9-d2462fb1d5f8; last accessed 16 th Jan. 2022).
The often referenced date “1837” traces back to Kraepelin (1903), Attems (1930) or even earlier to the wrong dating of Heft 9 of the Koch series. Bonato et al. (2016), item “ Scolopendra italica C. L. Koch, 1837 ”, mix the references of Heft 9 of the Koch series and Heft 142 of the Herrich-Schäffer series, and also cite “1837” in error.
description: Published as part of Doménech, Carles & Nagel, Peter, 2022, On the dates of publication of four European species of Scolopendra Linnaeus 1758 described by C. L. Koch (Myriapoda, Chilopoda), pp. 125-135 in Zootaxa 5159 (1) on page 127, DOI: 10.11646/zootaxa.5159.1.6, http://zenodo.org/record/6770984
Scolopendra graeca C. L. Koch 1836
Creators: name: Doménech, Carles
name: Nagel, Peter
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Chilopoda
Scolopendromorpha
Scolopendridae
Scolopendra
Scolopendra graeca

description: Scolopendra graeca C. L. Koch, 1836
Original description:
Scolopendra graeca C. L. Koch 1836 [1. Oct.]. Text 9.1 [Anmerkung 2, 1 p., unpaginated] - In: Koch, C.L. (1836a) Deutschlands Crustaceen, Myriapoden und Arachniden. Ein Beitrag zur deutschen Fauna. Herausgegeben von Dr. Herrich-Schäffer. [see S. clavipes above] 9 tes Heft. Regensburg: Fr. Pustet.
This case is similar to S. clavipes (see above). The pretended original description in Koch (1847) is just a comprehensive redescription from Koch (1836a, b). The original description was published as “ Anmerkung 2” in line with the description of S. italica in Heft 9 of the Koch series and, concurrently, Heft 142 of the Herrich-Schäffer series without being listed in the index and neither illustrated.
The name S. graeca C. L. Koch, 1836 is corrected herewith from the wrong “1847” or referenced work “System der Myriapoda ”, respectively (Koch 1847, pp. 161, 269, plate 5 detail drawings). The latter reference was used in the sense of the first description e.g. by Koch (1863b pp. 70, 71, plate 95 habitus), Kraepelin (1903, p. 254), Attems (1930, p. 28) and Bonato et al. (2016).
The currently accepted name is Scolopendra cingulata Latreille, 1829 (see Bonato et al. 2016, founded on Kraepelin 1903).
description: Published as part of Doménech, Carles & Nagel, Peter, 2022, On the dates of publication of four European species of Scolopendra Linnaeus 1758 described by C. L. Koch (Myriapoda, Chilopoda), pp. 125-135 in Zootaxa 5159 (1) on page 130, DOI: 10.11646/zootaxa.5159.1.6, http://zenodo.org/record/6770984
MOESM1 of Mitochondrial DNA variants correlate with symptoms in myalgic encephalomyelitis/chronic fatigue syndrome
Creators: name: Billing-Ross, Paul
name: Germain, Arnaud
name: Kaixiong Ye
name: Keinan, Alon
name: Zhenglong Gu
name: Hanson, Maureen
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Developmental Biology
subject: Cancer
subject: Computational Biology

description: Additional file 1: Figure S1. Average mitochondrial DNA sequencing depth across all case and control individuals.
Disaster resilience of the Vancouver health care system to pandemic influenza
Creators: name: Dhariwal, Har-Rajandeep Singh
Publisher: name: University of British Columbia
Year: 2009

description: By fostering resiliency in the health care sector, disruption to the delivery of health care can be minimized in a pandemic. This study’s goal is to evaluate the resilience of the health care system to pandemic influenza by using Greater Vancouver as a case study. The methodological approach is structured around a decision/event tree analysis that computes conditional probabilities of events in an influenza outbreak. Tree branches are partially populated through data procured from semi-structured interviews with ten regional experts. A pandemic influenza scenario was created to provide a specific context to the interview questions. Although the interviews are the primary data source, further information was accumulated through documents such as the British Columbia Pandemic Influenza Preparedness Plan, as well as from a comprehensive review of the existing literature. This event tree allows estimation of the likelihood of certain events occurring in a pandemic, including characteristics such as time, morbidity, and mortality. Additional outcomes include an assessment of the alternative response strategies. This approach is distinctive since prior research on health care has not examined the systems perspective. This perspective allows for a consideration of the entire health care network in a region, including the relationships between each facility and the agencies that govern them. Consequences of the analysis indicate the likelihood of occurrence for four disruption levels, based on the mortality, hospitalizations and stress on the health care system felt in the region. Sensitivity analyses were also conducted to assess the impact of policy decisions. Results suggest that a moderate pandemic event will have a 0.22 – 0.27 probability for causing disruption in the highest two levels, which indicate substantial disruption. Vaccinations were expected to have the greatest impact on reducing virus transmission, if a vaccine is shown to be effective, and made widely available. Three alternative policy options were explored: the All-Mitigations Policy, the Isolation and Social Distancing Policy, and the No Vaccinations Policy. Results indicated a need to further incorporate social distancing and isolation into existing control strategies, and to generate policies and establish agreements to expedite the development and distribution of vaccines in a pandemic’s early phases.
Additional file 3: Figure S3. of The evolution of heat shock protein sequences, cis-regulatory elements, and expression profiles in the eusocial Hymenoptera
Creators: name: Nguyen, Andrew
name: Gotelli, Nicholas
name: Cahan, Sara
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Maximum likelihood phylogeny of hsc70-5 for 17 species of insects (rooted on A. pisum) using a JTT amino acid substitution model and 1000 bootstrap replicates. (DOCX 240 kb)
MOESM1 of The tumor area occupied by Tbet+ cells in deeply invading cervical cancer predicts clinical outcome
Creators: name: Gorter, Arko
name: Prins, Frans
name: Diepen, Merel
name: Punt, Simone
name: Burg, Sjoerd
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: FigureÂ S1. Interaction analysis of lymph node status and immune parameters. The patient group was divided based on the four categories formed by patients with absence/presence of lymph node metastases and a large/small area of CD45+ cells (left graphs) or a high/low pixel count for Tbet+ cells (right graphs). For these groups the Kaplanâ  Meier curves for disease specific survival (top row) and the recurrence free survival (bottom row) were plotted. Log-Rank analysis was used to determine the statistical significance of the difference in survival.
Additional file 4: Figure S4. of The evolution of heat shock protein sequences, cis-regulatory elements, and expression profiles in the eusocial Hymenoptera
Creators: name: Nguyen, Andrew
name: Gotelli, Nicholas
name: Cahan, Sara
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Local alignment of the genomic region of orthologous hsp83 from 17 insect species spanning 5 insect Orders. (DOCX 89 kb)
Scolopendra germanica C. L. Koch 1836
Creators: name: Doménech, Carles
name: Nagel, Peter
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Chilopoda
Scolopendromorpha
Scolopendridae
Scolopendra
Scolopendra germanica

description: Scolopendra germanica C. L. Koch, 1836
Original description:
Scolopendra germanica C. L. Koch 1836 [1 Oct.]. Index Tab. 2., Plate 9.2., Text 9.2 [1 page with header 9.2, subsequent page unpaginated] - In: Koch, C.L. (1836a) Deutschlands Crustaceen, Myriapoden und Arachniden. Ein Beitrag zur deutschen Fauna. Herausgegeben von Dr. Herrich-Schäffer, 9 tes Heft. Regensburg: Fr. Pustet.
Parallel publication in Koch (1836b) (see treatise on S. clavipes above).
The name S. germanica C. L. Koch, 1836 is herewith corrected from the misleading “1837” e.g. in Kraepelin (1903) and Attems (1930).
When describing and publishing his “ Scolopendra germanica ” in 1836, Koch indicated a possible identity with the earlier described and illustrated “ Cryptops hortensis ” in Leach (1817) [actually: Cryptops hortensis (Donovan, 1810)] by relating to this reference and followed by a question mark. However, Koch has possibly never seen the reference “Zoological Miscellany” (Leach 1817), because he made mistakes with the volume number (II or III) and already in 1836 he called C. hortensis “[species] n. 2 [in Leach]” (actually: C. hortensis is species no. 1 in Leach, Vol. III, p. 42, 1817). This concept (S. germanica is a synonym of C. hortensis) was adopted by prominent researchers like Kraepelin (1903) and Attems (1930).
Immediately after its description, Gervais (1837, p. 51) synonymized S. germanica Koch with Cryptops savignii Leach, 1817 (actually: C. savignyi Leach, 1817, because of its prevailing usage: see Lewis 2014, Bonato et al. 2016). This classification was also adopted and maintained by Koch (1847) until his last work (Koch 1863b).
During the following decades none of these taxonomic concepts was unanimously accepted. The classification of S. germanica C. L. Koch, 1836 is debated until date. Considered synonyms comprise C. hortensis (Donovan, 1810), C. savignyi Leach, 1817, and, predominantly, C. anomalans Newport, 1844. Several relevant references do not mention S. germanica C. L. Koch, 1836 at all (Lewis 2011, 2014; Bonato et al. 2016). A focused taxonomic study seems to be necessary to reveal the taxonomic status of this species and to resolve this historic taxonomic controversy.
description: Published as part of Doménech, Carles & Nagel, Peter, 2022, On the dates of publication of four European species of Scolopendra Linnaeus 1758 described by C. L. Koch (Myriapoda, Chilopoda), pp. 125-135 in Zootaxa 5159 (1) on page 130, DOI: 10.11646/zootaxa.5159.1.6, http://zenodo.org/record/6770984
Pseudozubovskia Zheng & Lin & Zhang & Zeng 2014, gen. nov.
Creators: name: Zheng, Zhe-Min
name: Lin, Li-Liang
name: Zhang, Hong-Li
name: Zeng, Hui-Hua
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Orthoptera
Acrididae
Pseudozubovskia

description: Pseudozubovskia gen. nov.
Body medium size. Head shorter than pronotum. Fastigium of vertex oblique forward, protruding, frontal margin complete, frontal ridge with longitudinal furrow, without fastigial foveolae; antennae filiform; eyes ovate; pronotum cylindrical, posterior margin complete; median carina slender, severed by three transverse furrows, posterior transverse furrow located in the postmedian of pronotum, length of prozona greater than metazona; prosternal spine elongated conical, apex sharp; mesosternal lobes almost square, lateral lobes of metasternum divided; upper margin of median carina of hind femur smooth, without fine denticulate, top of lower kneelobe rounded; hind tibia without outer apical spine; tympanum small; tergum of last abdominal segment of male with small furculae; cercus of male almost columnar; apex of ovipositor sharp, not divided into two dentate.
This new genus is allied to Zubovskia Dornar-Zapolskii, 1933 and Anepipodisma Huang, 1984. The main differences are listed in Table 1.
description: Published as part of Zheng, Zhe-Min, Lin, Li-Liang, Zhang, Hong-Li & Zeng, Hui-Hua, 2014, One new genus and three new species of wingless grasshoppers from Xizang, China (Orthoptera: Acridoidea), pp. 263-268 in Zoological Systematics 39 (2) on page 263, DOI: 10.11865/zs20140208, http://zenodo.org/record/7474964
Additional file 8: of A bioinformatic survey of RNA-binding proteins in Plasmodium
Creators: name: BP Reddy
name: Sony Shrestha
name: Hart, Kevin
name: Xiaoying Liang
name: Kemirembe, Karen
name: Liwang Cui
name: Lindner, Scott
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: A unified gene list identified as common between human and P. falciparum DOZI interactomes. Gene IDs from P. falciparum, along with their predicted function and biological process are provided. (PDF 49 kb)
Community sports fields and atmospheric climate impacts: Australian and Canadian perspectives
Creators: name: Mallen, Cheryl
name: Dingle, Gregory
Publisher: name: La Trobe
Year: 2020
Subjects: subject: 150404 Sport and Leisure Management
subject: FOS: Economics and business

description: © 2020, © 2020 Informa UK Limited, trading as Taylor & Francis Group. Purpose: This paper presents a study of atmospheric climate impacts on community-level sports clubs’ (CLSC) in Australia and Canada, their vulnerability and resilience, and organisational responses. Design/Methods: A qualitative methodology was used with a multiple case research design. Data (interviews, documents) was collected from a sample of 23 CLSC organisations managing grass turf sport fields exposed to climatic extremes in temperate regions of both countries. Findings: CLSCs in both nations experienced vulnerability to climate impacts. Direct damage to playing fields resulted from extreme climate events. Indirect impacts include higher injury risks, interrupted and/or cancelled competitions, insurance risks, plus higher operating and capital costs. Adapted management was evident for water resources, playing turf, and organisational policies. Practical Implications: Provides insights into the changing practice of sport management at the community-level. Research Contribution: The results challenge the assumption that climate is a static and benign resource for sport. This study demonstrates impacts of climate extremes on sport in the northern and southern hemispheres, the potential for adapting sport management practices, and developing resilience.
A INFLUÊNCIA DA INTELIGÊNCIA ARTIFICIAL (IA) NOS PROCESSOS DE AUTOMAÇÃO INDUSTRIAL
Creators: name: Estrela, Henrique Dias
name: Araújo, Fernando Rafael da C. De
name: Moreira, Kleber da Silveira
Publisher: name: Zenodo
Year: 2024
Subjects: Inteligência Artificial
Automação Industrial
Otimização de Produção
Manutenção Preditiva
Controle de Qualidade

description: A inteligência artificial (IA) tem desempenhado um papel fundamental na automação industrial, transformando significativamente os processos de fabricação. Neste artigo, realizamos uma revisão da literatura para explorar o impacto da IA na indústria, destacando suas aplicações em otimização de produção, manutenção preditiva, controle de qualidade e gestão de cadeia de suprimentos. Discutimos os benefícios da IA, como aumento da eficiência operacional e redução de custos, bem como os desafios éticos associados, como privacidade de dados e responsabilidade algorítmica. Concluímos que a integração da IA na automação industrial é essencial para impulsionar a competitividade e a inovação no setor, ressaltando a importância de abordagens éticas e responsáveis para o desenvolvimento e implementação dessa tecnologia.
Hydrogel-based microfluidic system for cell culture
Creators: name: Chen, Michael C.W.
Publisher: name: University of British Columbia
Year: 2009

description: Traditionally, cell culture has been done in culture flasks or well plates where the volumes and length scales involved in the culture environment are many orders of magnitude larger than the size scale of individual cells. To better tailor medical care to an individual patient, it may be necessary to carry out genetic, physiological, and biochemical analyses on very small cell samples and to have an in vitro cell culture environment that more closely approximates the in vivo conditions. A microfluidic device that integrates both cell handling and long-term 3-D cell culture techniques is presented. The designed microdevice traps cells with alginate, an ionically cross-linking hydrogel, which mimics the extra cellular matrix within our body. To encapsulate the cells, a solution of calcium ions is introduced in parallel with the alginate precursor cell suspension. Alginate hydrogel forms at the interface and as the region of gel grows it traps cells inside. This is a reversible process; the gel matrix can be dissolved and the cells can be released by the addition of ethylene-diaminetetraacetic acid (EDTA), a calcium chelator. To show that the microfluidic device is reliable for long term mammalian cell culture, hepatocytes and breast tumor cells were cultured within the alginate gel layer inside the microfluidic device for more than two weeks. Hepatocytes were able to form three-dimensional aggregates within the microfluidic hydrogel environment. We further demonstrate the possibility of performing anticancer agent screening within this device. Breast tumor cells seeded in the microchannel were treated with doxorubicin, a common chemotherapy drug. Compared to controls, the doxorubicin inhibited cell proliferation. In future, this system will have applications in cell-based testing and in studies involving small cell populations, such as cancer cells obtained from needle biopsies of tumors.
MOESM3 of Mitochondrial DNA variants correlate with symptoms in myalgic encephalomyelitis/chronic fatigue syndrome
Creators: name: Billing-Ross, Paul
name: Germain, Arnaud
name: Kaixiong Ye
name: Keinan, Alon
name: Zhenglong Gu
name: Hanson, Maureen
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Computational Biology

description: Additional file 3: Table S2. Association analysis of CFS risk with mtDNA haplogroups in males.
Additional file 1: of The relationship between foot arch measurements and walking parameters in children
Creators: name: Gill, Simone
name: Keimig, Sara
name: Kelty-Stephen, Damian
name: Ya-Ching Hung
name: DeSilva, Jeremy
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology

description: How to Calculate the Keimig Index (KI). (DOCX 377Â kb)
MOESM9 of Mitochondrial DNA variants correlate with symptoms in myalgic encephalomyelitis/chronic fatigue syndrome
Creators: name: Billing-Ross, Paul
name: Germain, Arnaud
name: Kaixiong Ye
name: Keinan, Alon
name: Zhenglong Gu
name: Hanson, Maureen
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer

description: Additional file 9: Figure S3. Quantileâ  quantile plots of symptoms significantly associated with mtDNA SNPs.
MOESM12 of Mitochondrial DNA variants correlate with symptoms in myalgic encephalomyelitis/chronic fatigue syndrome
Creators: name: Billing-Ross, Paul
name: Germain, Arnaud
name: Kaixiong Ye
name: Keinan, Alon
name: Zhenglong Gu
name: Hanson, Maureen
Publisher: name: Figshare
Year: 2016
Subjects: subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Plant Biology

description: Additional file 12: Figure S6. Comparison of HPUI distribution between individuals who have experienced ME/CFS for less than 3Â years and more than 3Â years.
Cuba si – N° 39 Quatrième trimestre 1971
Creators: name: Association France-Cuba
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2024
Subjects: Relations France-Cuba

description: Revue trimestrielle de l’Association France-Cuba.
description: Revista trimestral de la Asociación Francia-Cuba.
description: Notes : Deux exemplaires du document conservés.
description: Type de publication : Revue
description: Titre de la publication : Cuba si
description: Numéro de la publication : 39 / Quatrième trimestre
description: Périodicité : Trimestriel
description: Source: DDC-D-D2-1971-10-00
description: Source: Localisation de la ressource : Centre de Recherches Latino-Américaines (CRLA–Archivos, ITEM UMR8132). MSHS - Bât. A5, 1er étage 5 rue Théodore Lefebvre - TSA21103. 86073 Poitiers cedex 9.
description: created: 1971-10/1971-12
Human CD4+ iNKT cell adoptive immunotherapy induces anti-tumor responses against CD1d-negative EBV-driven B lymphoma
Creators: name: Akshat Sharma
name: Kenney, Shannon C.
name: Baiu, Dana C.
name: Basu, Jayati
name: Schehr, Jennifer
name: Smith, Kelsey A.
name: Johannsen, Eric C.
name: Gumperz, Jenny
name: Ohashi, Makoto
Publisher: name: OSF Registries
Year: 2024
Subjects: subject: Immunology and Infectious Disease
subject: Life Sciences
subject: Immunoprophylaxis and Therapy

description: Data for paper published in "Immunology", May 2024
Additional file 7: Figure S3. of
                     X. couchianus and X. hellerii genome models provide genomic variation insight among Xiphophorus species
Creators: name: Yingjia Shen
name: Chalopin, Domitille
name: Tzintzuni Garcia
name: Mikki Boswell
name: Boswell, William
name: Shiryev, Sergey
name: Agarwala, Richa
name: Jean-Nicolas Volff
name: Postlethwait, John
name: Schartl, Manfred
name: Minx, Patrick
name: Warren, Wesley
name: Walter, Ronald
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Dot plots of location of one-to-one orthologues in the chromosomes of X. hellerii and X. maculatus. (PDF 111 kb)
The Museum : textworks, cultural economy, and polytextual dispersion
Creators: name: DeWaard, Andrew
Publisher: name: University of British Columbia
Year: 2009

description: The Museum is a theoretical model that aims to render a media-saturated world in which our media have become saturated with media. Corporate conglomeration of the cultural industries has transformed the production and circulation of art; the Museum captures the inter-related complexities of this development in which the notion of a singular text breaks down in the wake of synergistic proliferation. Conceiving of this ‘new society’ requires new conceptions: a model (the Museum), a language (polytextuality), a discipline (cultural economy), and a product (the textwork). Section I establishes the ‘Geography of the Museum’, starting with its chief architect, André Malraux, who designs the neo-aesthetic foundation of the ‘Imaginary Museum’ (Chapter Three). The post-structural blueprints are then drawn up by Mikhail Bakhtin and Julia Kristeva, giving the Museum its polytextual essence (Chapter Four). The Museum is then physically erected by the conglomerated cultural industries, transforming the Imaginary Museum into a material consumer experience (Chapter Five). Section II turns to the ‘Display of the Museum’, cataloguing the different ways in which art manifests itself within the Museum. By way of Roland Barthes, the textwork is theorized, a dialogical designation for the type of networked cultural output that now dominates popular culture (Chapter Seven). Case studies of particularly illuminating textworks are then presented, illustrating the polytextual content of the Museum in a multitude of intersecting forms and mediums. A decisively polytextual museum exhibition, “KRAZY! The Delirious World of Anime + Comics + Video Games + Art”, as well as two films – Children of Men and V for Vendetta – are seen as literal embodiments of the Museum (Chapter Eight). The next textwork is concerned with intermedial structure, and focuses on the Wu-Tang Clan’s interpolation of certain cinematic genres, as well as other mediums (Chapter Nine). The final textwork is General Electric, the world’s largest conglomerate. Transformers and 30 Rock, two very different GE products, both explicitly exhibit corporate synergy through polytextuality (Chapter Ten). Over-arching cultural shifts are demonstrated by the Museum: access over ownership, circulation over distribution, dialogue over delivery, digital social text over authorship, and multiple over singular.
Additional file 3: Figure S1. of Rice Chloroplast Genome Variation Architecture and Phylogenetic Dissection in Diverse Oryza Species Assessed by Whole-Genome Resequencing
Creators: name: Tong, Wei
name: Tae-Sung Kim
name: Park, Yong-Jin
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Physiology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Overall Ts/Tv (Transition/ Transversion ratio) in 1kb bins of the whole collection and different groups. ASW: Asian wild rice, ASC: Asian cultivated rice, AFW: African wild rice, AFC: African cultivated rice. (DOCX 78 kb)
Additional file 8: Table S6. of Rice Chloroplast Genome Variation Architecture and Phylogenetic Dissection in Diverse Oryza Species Assessed by Whole-Genome Resequencing
Creators: name: Tong, Wei
name: Tae-Sung Kim
name: Park, Yong-Jin
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Fifty cultivated and wild rice accessions and 38 African rice (including 19 African cultivated rice and 19 African wild rice) accessions used in the chloroplast genome study. (DOCX 21 kb)
Additional file 1: of General practice based psychosocial interventions for supporting carers of people with dementia or stroke: a systematic review
Creators: name: Greenwood, Nan
name: Pelone, Ferruccio
name: Hassenkamp, Anne-Marie
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: Studies excluded in the last stage of the screening process. (DOCX 25 kb)
MPEC 2024-N13 : 2024 JE52
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2024
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469
subject: 2024 JE52

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
Additional file 1: of Bivalve-specific gene expansion in the pearl oyster genome: implications of adaptation to a sessile lifestyle
Creators: name: Takeuchi, Takeshi
name: Koyanagi, Ryo
name: Fuki Gyoja
name: Kanda, Miyuki
name: Hisata, Kanako
name: Fujie, Manabu
name: Goto, Hiroki
name: Yamasaki, Shinichi
name: Kiyohito Nagai
name: Morino, Yoshiaki
name: Miyamoto, Hiroshi
name: Endo, Kazuyoshi
name: Endo, Hirotoshi
name: Nagasawa, Hiromichi
name: Shigeharu Kinoshita
name: Asakawa, Shuichi
name: Shugo Watabe
name: Satoh, Noriyuki
name: Kawashima, Takeshi
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Table S1. Summary of Pinctada fucata genome sequence data. Table S2. Summary of the Pinctada fucata genome assemblies. Table S3. Numbers of genes containing functional domains related to heat shock proteins. See also Fig.Â 3a. Table S4. Numbers of genes containing functional domains related to non-self recognition and signaling. See also Fig.Â 4a. Table S5. List of biomineralization-related genes tandemly arranged in the genome. See also Fig.Â 5. Table S6. Hox and neighboring gene models tandemly arranged in the genome. Table S7. ParaHox and neighboring gene models tandemly arranged in the genome. Table S8. Wnt and adjacent gene models tandemly arranged in the genome. (PDF 385 kb)
Additional file 1: of Human FMO2-based microbial whole-cell catalysts for drug metabolite synthesis
Creators: name: Geier, Martina
name: Bachler, Thorsten
name: Hanlon, Steven
name: Eggimann, Fabian
name: Kittelmann, Matthias
name: HansjĂśrg Weber
name: LĂźtz, Stephan
name: Wirz, Beat
name: Winkler, Margit
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biophysics
subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Figure S1. 1H NMR of trifluoperazine metabolite; Figure S2. 2D HSQC NMR of trifluoperazine metabolite; Figure S3. 2D HMBC NMR of trifluoperazine metabolite; Figure S4. 1H NMR of benzydamine metabolite and benzydamine; Figure S5. Comparison of DEPT NMR of benzydamine metabolite with 13C NMR of parent benzydamine.
Additional file 1: of A medical device-grade T1 and ECV phantom for global T1 mapping quality assuranceâ  the T1 Mapping and ECV Standardization in cardiovascular magnetic resonance (T1MES) program
Creators: name: Captur, Gabriella
name: Gatehouse, Peter
name: Keenan, Kathryn
name: Heslinga, Friso
name: Ruediger Bruehl
name: Prothmann, Marcel
name: Graves, Martin
name: Eames, Richard
name: Torlasco, Camilla
name: Benedetti, Giulia
name: Donovan, Jacqueline
name: Ittermann, Bernd
name: Boubertakh, Redha
name: Bathgate, Andrew
name: Celine Royet
name: Wenjie Pang
name: Nezafat, Reza
name: Salerno, Michael
name: Kellman, Peter
name: Moon, James
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: The T1MES User Manual. (PDF 13350Â kb)
Additional file 6: Figure S2. of Rice Chloroplast Genome Variation Architecture and Phylogenetic Dissection in Diverse Oryza Species Assessed by Whole-Genome Resequencing
Creators: name: Tong, Wei
name: Tae-Sung Kim
name: Park, Yong-Jin
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Plant Biology

description: Magnitude of ΔK as a function of K and cross-validation error estimation to find the optimal K value for the population structure in STRUCTURE and ADMIXTURE. In this case, the maximum value of ΔK for all of the accessions was identified as K  =  4 in STRUCTURE. While a lowest error value in K = 8 was identified in ADMIXTURE. But the values were similar from K = 5 to 10. (DOCX 58 kb)
Additional file 3: of Bivalve-specific gene expansion in the pearl oyster genome: implications of adaptation to a sessile lifestyle
Creators: name: Takeuchi, Takeshi
name: Koyanagi, Ryo
name: Fuki Gyoja
name: Kanda, Miyuki
name: Hisata, Kanako
name: Fujie, Manabu
name: Goto, Hiroki
name: Yamasaki, Shinichi
name: Kiyohito Nagai
name: Morino, Yoshiaki
name: Miyamoto, Hiroshi
name: Endo, Kazuyoshi
name: Endo, Hirotoshi
name: Nagasawa, Hiromichi
name: Shigeharu Kinoshita
name: Asakawa, Shuichi
name: Shugo Watabe
name: Satoh, Noriyuki
name: Kawashima, Takeshi
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Computational Biology

description: Assembly strategy. (PDF 97 kb)
Development of peptide-like library
Creators: name: Zhou, Miao
Publisher: name: University of British Columbia
Year: 2009

description: Peptide libraries are important in peptide based drug discovery and investigations of biological targets. Different chemical and biological methods have been developed to screen and decode peptide libraries. mRNA display technology is a biological method that utilizes in vitro translation systems to build peptide libraries, and the screened peptides are decoded by their covalently attached oligonucleotide templates. Like other biological methods, mRNA display technology can generate peptide libraries with high fidelity and speed but the chemical repertoire is limited mostly to natural amino acids. Our research goal is to expand the chemical repertoire of mRNA display technology by using it in combination with an in vitro reconstituted translation system, and build peptides containing stabilizing chemical features such as N-methyl amino acids that would make peptides more proteolytic resistant and drug-like. Using a streptavidin-dependent gel shift assay, the unnatural amino acids, N-methyl-L-alanine, N-methyl-L-glutamate, N-methyl-L-ornithine, L-abrine, t-butyl-L-glycine, biocytin, and sarcosine were shown to be able to incorporate successively into hexa-peptides in the mRNA display format. The peptides containing unnatural amino acids were shown to be more resistant to proteinase K proteolysis than peptides containing only the natural amino acid L-alanine. Several mRNA libraries were made in accordance with the mRNA display format. Repeated E. coli in vitro reconstituted translations of these mRNA libraries with varying translation conditions fail to yield peptides of significant lengths. However, a library of tetra-peptides was synthesized in the absence of mRNA display format. Thus, the puromycin linker required by mRNA display technology seemed to interfere with proper translations in the E. coli in vitro reconstituted translation system. Experiments showed that E. coli in vitro reconstituted translation system is slow at making full-length peptides in the context of mRNA display technology and a majority of products are prematurely terminated translation products, which could be due to slow peptidyl formation in the E. coli in vitro reconstituted translation system, or the result of undesirable interaction between the E. coli ribosome and puromycin linker that interfere with normal translation. This slow translation kinetic issue needs to be addressed with further experiments in order to successfully pursue the development of this technology.
Additional file 6: Figure S2. of
                     X. couchianus and X. hellerii genome models provide genomic variation insight among Xiphophorus species
Creators: name: Yingjia Shen
name: Chalopin, Domitille
name: Tzintzuni Garcia
name: Mikki Boswell
name: Boswell, William
name: Shiryev, Sergey
name: Agarwala, Richa
name: Jean-Nicolas Volff
name: Postlethwait, John
name: Schartl, Manfred
name: Minx, Patrick
name: Warren, Wesley
name: Walter, Ronald
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Dot plots of location of one-to-one orthologues in the 24 chromosomes of X. couchianus and X. maculatus. (PDF 110 kb)
Additional file 7: Table S5. of Rice Chloroplast Genome Variation Architecture and Phylogenetic Dissection in Diverse Oryza Species Assessed by Whole-Genome Resequencing
Creators: name: Tong, Wei
name: Tae-Sung Kim
name: Park, Yong-Jin
Publisher: name: Figshare
Year: 2016
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: The 295 accessions information sequenced by ourselves and subpopulation designations used in this study. (DOCX 31 kb)