cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 16: of Transcriptomic analysis reveals novel downstream regulatory motifs and highly transcribed virulence factor genes of Entamoeba histolytica
Creators: name: Naiyer, Sarah
name: Kaur, Devinder
name: Jamaluddin Ahamad
name: Singh, Shashi
name: Yatendra Singh
name: Thakur, Vivek
name: Bhattacharya, Alok
name: Bhattacharya, Sudha
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology
subject: Computational Biology

description: Status of cysteine protease expression in comparison to Tillack et al., 2007 and Matthiesen et al., 2013 [35,36]. (DOCX 20 kb)
Procédure synthétique pour répliquer le Référentiel en libre accès de l'INFN (basé sur Invenio v3 et Zenodo)
Creators: name: Fargetta, Marco
name: Rotondo, Riccardo
name: Barbera, Roberto
Publisher: name: INFN Open Access Repository
Year: 2021
Subjects: infn
openaccessrepository
invenio
zenodo

description: Ce document contient une procédure synthétique pour répliquer le dépôt en libre accès de l'INFN.
Passer rutilans subsp. debilis Hartert
Creators: name: Lecroy, Mary
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Aves
Passeriformes
Passeridae
Passer
Passer rutilans
Passer rutilans debilis hartert

description: Passer rutilans debilis Hartert
Passer rutilans debilis Hartert, 1904a: 162 (Sind- Tal in Kaschmir).
Now Passer rutilans cinnamomeus (Gould, 1836). See Hartert, 1919: 159; Vaurie, 1956: 17–19; Dickinson, 2003: 716; and Summers-Smith, 2009: 796.
HOLOTYPE: AMNH 719338, male, collected in the Sind Valley (= Sind-Tal), Kashmir, India, on 19 July 1873, by Colonel Biddulph (no. 7265.g). From the Rothschild Collection.
COMMENTS: In the original description, Hartert gave Biddulph’s number of the holotype with unique added letter and measurements for more than one male; the female was not described. There are five male Biddulph skins in AMNH in addition to the holotype, all of which bear the number 7265 with an added letter, different for each. I assume this to be a lot number assigned for a sale. I have considered these five specimens paratypes: Kashmir, AMNH 719349 (7265.a), no date; ‘‘ Souamaz,’’ AMNH 719352 (7265.h), 15 July, no year; Murree, AMNH 719353 (7265.k), AMNH 719354 (7265.j), no date; Simla, AMNH 719357 (7265.i), July [18]75. Other specimens with the number 7265 came to AMNH with the Rothschild Collection, but they were either collected by others or were females.
John Biddulph was in the British Colonial Service and resided in Gilgit, Kashmir, at least twice (Biddulph, 1881, 1882). In both of his articles, he described the country around Gilgit in which birds were collected. Strangely, he did not list Passer rutilans or P. cinnamomeus in either paper, although the specimens are identified as P. cinnamomeus on his labels.
Lozupone et al. (2004) noted that the Sind Valley extends from Srinagar, 34.08N, 74.50E, to Zoji La Pass, 34.18N, 75.31E.
description: Published as part of Lecroy, Mary, 2014, Type Specimens Of Birds In The American Museum Of Natural History Part 12. Passeriformes: Ploceidae, Sturnidae, Buphagidae, Oriolidae, Dicruridae, Callaeidae, Grallinidae, Corcoracidae, Artamidae, Cracticidae, Ptilonorhynchidae, Cnemophilidae, Paradisaeidae, And Corvidae, pp. 1-165 in Bulletin of the American Museum of Natural History 2014 (393) on pages 8-9, DOI: 10.1206/885.1, http://zenodo.org/record/4629954
Large Lepton Mixings Induced by Sterile Neutrino
Creators: name: Balaji, K. R. S.
name: Pérez-Lorenzana, A.
name: Smirnov, A. Yu.
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We assume that the mass matrix of active neutrinos has hierarchical form with small mixings, similar to quark mass matrix. We show that the large mixings between $ν_μ$ and $ν_τ$ as well as between $ν_e$ and certain combination of $ν_μ$ and $ν_τ$ required by the present data can appear due to the presence of a sterile neutrino state. Two realizations of this possibility are considered: (i) Large flavor mixing appears as a result of sterile neutrino ``decoupling'' ($m_{ss} \gg m_a$), so that the active-sterile mixings are negligible. (ii) Sterile neutrino has a mass of O(1) eV and its mixing with active neutrinos can be observable. In the second case, the (3+1) scheme of neutrino mass, which also accommodates the LSND result, can be reproduced, provided the hierarchy of the mass matrix of active neutrinos is not strong (the ratio of largest to smallest elements is about two orders of magnitude). The enhancement of lepton mixing via coupling with sterile neutrino can be realized in Grand Unified theories with the see-saw mechanism of neutrino mass generation.
description: 14 pages, latex, no figures, discussion extended, numerical example in Eq. 35 changed, references added
Light-induced states in the transient-absorption spectrum of a periodically pumped strong-field-excited system
Creators: name: Haug, Juliane
name: Cavaletto, Stefano M.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Atomic Physics (physics.atom-ph)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: The transient-absorption spectrum of a $V$-type three-level system is investigated, when this is periodically excited by a train of equally spaced, $δ$-like pump pulses as, e.g., from an optical-frequency-comb laser. We show that, even though the probe pulse is not assumed to be much shorter than the pump pulses, light-induced states appear in the absorption spectrum. The frequency- and time-delay-dependent features of the absorption spectra are investigated as a function of several laser control parameters, such as the number of pump pulses used, their pulse area, and the pulse-to-pulse phase shift. We show that the frequencies of the light-induced states and the time-delay-dependent features of the spectra contain information on the action of the intense pulses exciting the system, which can thus complement the information on light-imposed amplitude and phase changes encoded in the absorption line shapes.
description: 26 pages, 8 figures
Multifrequency filter search for high redshift sources and lensing systems in Herschel-ATLAS
Creators: name: Manjón-García, A.
name: Herranz, D.
name: Diego, J. M.
name: Bonavera, L.
name: González-Nuevo, J.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We present a new catalog of high-redshift candidate \textit{Herschel} sources. Our sample is obtained after applying a multifrequency filtering method ("matched multifilter"), which is designed to improve the signal-to-noise ratio (S/N) of faint extragalactic point sources. The method is tested against already-detected sources from the \textit{Herschel} Astrophysical Terahertz Large Area Survey (H-ATLAS) and used to search for new high-redshift candidates. The multifilter technique also produces an estimation of the photometric redshift of the sources. When compared with a sample of sources with known spectroscopic redshift, the photometric redshift returned from the multifilter is unbiased in the redshift range 0.8 < z < 4.3. Using simulated data we reproduced the same unbiased result in roughly the same redshift range and determined the error (and bias above $z\approx4$) in the photometric redshifts. Based on the multifilter technique, and a selection based on color, flux, and agreement of fit between the observed photometry and assumed SED, we find 370 robust candidates to be relatively bright high-redshift sources. A second sample with 237 objects focuses on the faint end at high-redshift. These 237 sources were previously near the H-ATLAS detection limit but are now confirmed with our technique as high significance detections. Finally, we look for possible lensed Herschel sources by cross-correlating the first sample of 370 objects with two different catalogs of known low-redshift objects, the redMaPPer Galaxy Cluster Catalog and a catalog of galaxies with spectroscopic redshift from the Sloan Digital Sky Survey Data Release 14. Our search renders a number of candidates to be lensed systems from the SDSS cross-correlation but none from the redMaPPeR confirming the more likely galactic nature of the lenses.
LiquidO: Novel Opaque Neutrino Detection Technology
Creators: name: CABRERA SERRA, Anatael
Publisher: name: Zenodo
Year: 2019
Subjects: LiquidO
Particle Physics
Particle Detection
Fundamentral Physics
Innovation

description: The neutrino discovery by Reines & Cowan paved the technical ground behind the establishment of much of today’s neutrino detection. Large instrumented volumes can and have been achieved via a key (implicit) principle: detector transparency. Much of that technology has yielded historical success since the 50s, including several Nobel prizes. The discovery of the Neutrino Oscillation phenomenon is a beautiful example of solving the long-standing “Solar” and “Atmospheric” anomalies by SNO and SuperKamiokande — along with many other experiments. 

Despite the remarkable success, much of such a “transparent technology” is known to suffer from some key limitations even after 70 years of maturity towards perfection. The challenge continues to endow detectors with powerful active background rejection while allowing large-volume articulation. Indeed, poor particle identification is a long-standing issue, only alleviated by adding an external shield (active or passive), which implies a major overburden to the underground laboratories.

In this seminar, I shall present for the first time a new technology, under intense R&D, called “LiquidO”, relying heavily on the detection of medium opacity for the first time. The effort is led by the LiquidO collaboration (20 institutions over 11 countries). We shall compare LiquidO to its transparent counterpart for maximal appreciation. While not perfect, LiquidO seems to one able to offer several detection features that might lead to breakthrough potential in the context of both neutrino and rare decay physics. This will be briefly highlighted too.
description: The first international release of the LiquidO technology and project (https://liquido.ijclab.in2p3.fr), led by the homonymous LiquidO scientific consortium.
NLO parton showers and subtractive techniques
Creators: name: Hautmann, F.
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Motivated by asking how to combine parton showers with nonleading QCD matrix elements, we discuss a subtractive technique based on gauge-invariant Wilson-line operators and how this can be used to treat the soft region.
description: Talk at the Linear Collider Workshop LCWS2000, Fermilab, October 2000
Passer hemileucus Ogilvie-Grant and Forbes
Creators: name: Lecroy, Mary
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Aves
Passeriformes
Passeridae
Passer
Passer hemileucus

description: Passer hemileucus Ogilvie-Grant and Forbes
Passer hemileucus Ogilvie-Grant and Forbes, 1899: 3 (Island of Abd-el-Kuri).
Now Passer hemileucus Ogilvie-Grant and Forbes, 1899. See Ogilvie-Grant and Forbes, 1903: 58– 59, pl. 7, fig. 1; Dickinson, 2003: 716; Kirwan, 2008: 83–93; and Summers-Smith, 2009: 799.
SYNTYPE: AMNH 719511, male, collected on Abd al-Kuri (= Abd-el-Kuri) Island (between Somalia and Socotra), on 22 February 1899, by W.R. Ogilvie-Grant (no. 480). From the Rothschild Collection.
COMMENTS: Ogilvie-Grant and Forbes did not designate a type or enumerate their specimens in the original description. Later, Ogilvie-Grant and Forbes (1903: 58–59) noted that they had collected three males and one female on Abd al Kuri. They had visited the island twice, 3–5 December 1898 and 22–23 February 1899 (Forbes, 1903: xxiv–xxxi). The AMNH specimen had not been recognized as a syntype previously. A male and a female syntype are in BMNH (Warren and Harrison, 1971: 234) and a male syntype is in LIVCM (no. 31.12.1900.163, collected 5 December 1898, T. Parker, personal commun.).
Species limits within the Passer motitensis complex have been variously treated (see Kirwan, 2008, for a summary). Summers- Smith (2009: 709) considered P. insularis to form a superspecies with P. iagoensis, P. cordofanicus, P. shelleyi, P. rufocinctus, and P. motitensis, with hemileucus a subspecies of P. insularis. However, Kirwan (2008), as a result of his extensive morphological study of specimens of Passer insularis and Passer hemileucus, pointed out that differences between these two forms are greater than had been previously appreciated and that they should be considered species.
Dickinson et al. (2011: 190) drew attention to the incorrect dating of this name by Moreau and Greenway (1962: 15), who have been followed by most subsequent authors.
description: Published as part of Lecroy, Mary, 2014, Type Specimens Of Birds In The American Museum Of Natural History Part 12. Passeriformes: Ploceidae, Sturnidae, Buphagidae, Oriolidae, Dicruridae, Callaeidae, Grallinidae, Corcoracidae, Artamidae, Cracticidae, Ptilonorhynchidae, Cnemophilidae, Paradisaeidae, And Corvidae, pp. 1-165 in Bulletin of the American Museum of Natural History 2014 (393) on page 9, DOI: 10.1206/885.1, http://zenodo.org/record/4629954
Additional file 4: of Acting locally - affecting globally: RNA sequencing of gilthead sea bream with a mild Sparicotyle chrysophrii infection reveals effects on apoptosis, immune and hypoxia related genes
Creators: name: M. Piazzon
name: Mladineo, Ivona
name: Naya-Català, Fernando
name: Dirks, Ron
name: Jong-Raadsen, Susanne
name: Vrbatović, Anamarija
name: Hrabar, Jerko
name: Pérez-Sánchez, Jaume
name: Sitjà-Bobadilla, Ariadna
Publisher: name: figshare
Year: 2019
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Exploratory analysis of the samples prior to differential expression study. The FPKM density distributions showed three samples with anomalies (red arrows and red in the legend) that were not included in downstream analyses: gill infected parasitized 1 (A), gill infected non-parasitized 5 (B) and spleen infected 2 (D). All liver samples (C) showed uniform distributions and were included in the analyses. (PDF 292 kb)
title: Особенности твердорастворного упрочнения металлов и сплавов при высокоскоростной деформации
Creators: name: Малашенко, Вадим
name: Гладкая, Алла
name: Малашенко, Татьяна
Publisher: name: Новгородский государственный университет имени Ярослава Мудрого (НовГУ)
Year: 2021

description: Теоретически проанализирована высокоскоростная деформация металлов и сплавов, содержащих легирующие элементы. Получено выражение для вклада легирующих элементов в величину деформирующих напряжений. Твердорастворное упрочнение сплавов линейно возрастает при увеличении скорости пластической деформации. Концентрационная зависимость механических свойств при высокоскоростной деформации существенно отличается от аналогичной зависимости при квазистатической деформации. Это отличие обусловлено действием коллективных динамических эффектов. Концентрационная зависимость упрочнения при высокоскоростной деформации определяется конкуренцией взаимодействия дислокации с легирующими элементами и дислокациями ансамбля. Если доминирует взаимодействие с легирующими элементами, упрочнение увеличивается пропорционально квадратному корню из концентрации. Если преобладает коллективное взаимодействие дислокаций, упрочнение линейно возрастает при увеличении концентрации.
Structure and Strength of Dislocation Junctions: An Atomic Level Analysis
Creators: name: Rodney, D.
name: Phillips, R.
Publisher: name: arXiv
Year: 1998
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The quasicontinuum method is used to simulate three-dimensional Lomer-Cottrell junctions both in the absence and in the presence of an applied stress. The simulations show that this type of junction is destroyed by an unzipping mechanism in which the dislocations that form the junction are gradually pulled apart along the junction segment. The calculated critical stress needed for breaking the junction is comparable to that predicted by line tension models. The simulations also demonstrate a strong influence of the initial dislocation line directions on the breaking mechanism, an effect that is neglected in the macroscopic treatment of the hardening effect of junctions.
description: 4 pages, 3 figures
Additional file 7 of CircEZH2/miR-133b/IGF2BP2 aggravates colorectal cancer progression via enhancing the stability of m6A-modified CREB1 mRNA
Creators: name: Yao, Bing
name: Zhang, Qinglin
name: Yang, Zhou
name: An, Fangmei
name: Nie, He
name: Wang, Hui
name: Yang, Cheng
name: Sun, Jing
name: Chen, Ke
name: Zhou, Jingwan
name: Bai, Bing
name: Gu, Shouyong
name: Zhao, Wei
name: Zhan, Qiang
Publisher: name: figshare
Year: 2022
Subjects: subject: Biophysics
subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Cancer

description: Additional file 7.
HSCO$^+$ and DSCO$^+$: a multi-technique approach in the laboratory for the spectroscopy of interstellar ions
Creators: name: Lattanzi, Valerio
name: Spezzano, Silvia
name: Laas, Jacob C.
name: Chantzos, Johanna
name: Bizzocchi, Luca
name: Lee, Kin Long Kelvin
name: McCarthy, Michael C.
name: Caselli, Paola
Publisher: name: arXiv
Year: 2018
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: Protonated molecular species have been proven to be abundant in the interstellar gas. This class of molecules is also pivotal for the determination of important physical parameters for the ISM evolution (e.g. gas ionisation fraction) or as tracers of non-polar, hence not directly observable, species. The identification of these molecular species through radioastronomical observations is directly linked to a precise laboratory spectral characterisation. The goal of the present work is to extend the laboratory measurements of the pure rotational spectrum of the ground electronic state of protonated carbonyl sulfide (HSCO$^+$) and its deuterium substituted isotopomer (DSCO$^+$). At the same time, we show how implementing different laboratory techniques allows the determination of different spectroscopical properties of asymmetric-top protonated species. Three different high-resolution experiments were involved to detected for the first time the $b-$type rotational spectrum of HSCO$^+$, and to extend, well into the sub-millimeter region, the $a-$type spectrum of the same molecular species and DSCO$^+$. The electronic ground-state of both ions have been investigated in the 273-405 GHz frequency range, allowing the detection of 60 and 50 new rotational transitions for HSCO$^+$ and DSCO$^+$, respectively. The combination of our new measurements with the three rotational transitions previously observed in the microwave region permits the rest frequencies of the astronomically most relevant transitions to be predicted to better than 100 kHz for both HSCO$^+$ and DSCO$^+$ up to 500 GHz, equivalent to better than 60 m/s in terms of equivalent radial velocity. The present work illustrates the importance of using different laboratory techniques to spectroscopically characterise a protonated species at high frequency, and how a similar approach can be adopted when dealing with reactive species.
description: 7 pages, 4 figures. Accepted for publication in Astronomy and Astrophysics
Model-independent Constraints on Topcolor from $R_b$
Creators: name: Burdman, Gustavo
name: Kominis, Dimitris
Publisher: name: arXiv
Year: 1997
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We identify and compute the main corrections to $R_b$ in Topcolor theories. They are due to the top-pions, the pseudo-Goldstone bosons associated with the chiral symmetry breaking responsible for the top quark mass, and amount to -(1-4)%, independent of the details of the Topcolor model. We show that the cancellation of this effect against the contributions from Topcolor vector and scalar resonances is unlikely, given the inherently distinct character of the two scales governing the potentially cancelling terms. The resulting value of $R_b$ leads to severe constraints on Topcolor theories.
description: 12 pages; uses LaTeX and psfig. Version to be published in Physics Letters B. Expanded discussion on top-pion and b-pion contributions, abridged discussion on vector mesons, change of Fig.2, one reference added. The full postscript version is also available at http://www.physik.tu-muenchen.de/tumphy/d/T30d/PAPERS/ TUM-HEP-267-97.ps.gz
Density fluctuations and entropy
Creators: name: Hernando, J. A.
name: Blum, L.
Publisher: name: arXiv
Year: 2000
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: A new functional for the entropy that is asymptotically correct both in the high and low density limits is proposed. The new form is [ S=S^{(id)}+S^{(ln)}+S^{(r)}+S^{(c)} ] where the new term S^{(c)} depends on the p-bodies density fluctuations $α_p$ and has the form [ S^{(c)}= {ln 2-1+\sum_{p=2}^\infty \frac{(\ln 2) ^p}{p!}α_p-[ \exp (α_2-1)-α_2]} +\hat S ], where $\hat S$ renormalizes the ring approximation S^{(r)}. This result is obtained by analyzing the functional dependence of the most general expression of the entropy: Two main results for S^{(c)} are proven: i) In the thermodynamic limit, only the functional dependence on the one body distribution function survives and ii) by summing to infinite order the leading contributions in the density a new numerical expression for the entropy is proposed with a new renormalized ring approximation included. The relationship of these results to the incompressible approximation to entropy is discussed.
description: 7 pages, ref. [5] added and included in introduction and conclusions
Energy Constraints for Climate Models from Hydrologic Partitioning
Creators: name: Yin, Jun
name: Calabrese, Salvatore
name: Daly, Edoardo
name: Porporato, Amilcare
Publisher: name: arXiv
Year: 2019
Subjects: subject: Geophysics (physics.geo-ph)
subject: Atmospheric and Oceanic Physics (physics.ao-ph)
subject: FOS: Physical sciences

description: It is well known that evaporative cooling of Earth's surface water reduces the amount of radiation that goes into sensible heat, namely the portion of radiation that produces higher temperatures. However, a rigorous use of long-term hydrologic measurements and the related theories of hydrologic partitioning have not yet been fully exploited to quantify these effects on climate. Here, we show that the Budyko's curve, a well-known and efficient framework for water balance estimation, can be effectively utilized to partition the surface energy fluxes by expressing the long-term evaporative fraction as a function of the dryness index. The combination of this energy partitioning method with hydrological observations allows us to estimate the surface energy components at watershed and continental scales. Analyzing climate model outputs through this new lens reveals energy biases due to inaccurate parameterization of hydrological and atmospheric processes, offering insight into model parameterization and providing useful information for improving climate projections.
description: 20 pages and 8 figures
Additional file 9 of CircEZH2/miR-133b/IGF2BP2 aggravates colorectal cancer progression via enhancing the stability of m6A-modified CREB1 mRNA
Creators: name: Yao, Bing
name: Zhang, Qinglin
name: Yang, Zhou
name: An, Fangmei
name: Nie, He
name: Wang, Hui
name: Yang, Cheng
name: Sun, Jing
name: Chen, Ke
name: Zhou, Jingwan
name: Bai, Bing
name: Gu, Shouyong
name: Zhao, Wei
name: Zhan, Qiang
Publisher: name: figshare
Year: 2022
Subjects: subject: Biophysics
subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Cancer

description: Additional file 9.
Constraints for Three-Dimensional Higher-Spin Interactions and Conformal Correlators
Creators: name: Fredenhagen, Stefan
name: Krüger, Olaf
name: Mkrtchyan, Karapet
Publisher: name: arXiv
Year: 2018
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: In the context of higher-spin holography, we compare the classification of cubic interaction vertices for higher-spin gravity theories in three dimensions to the possible three-point correlation functions of conserved higher-spin currents in two-dimensional conformal field theories. In both cases, the allowed structures are governed by triangle inequalities for the involved spins. It is established that higher-order correlators satisfy similar polygon inequalities and that the same inequalities are valid for higher-order continuations of cubic vertices in the three-dimensional higher-spin gravity.
description: 21 pages
title: Implementation of a software server and of an autonomous agent for the cooperative strategic game "Pandemic"
title: Υλοποίηση εξυπηρετητή λογισμικού και αυτόνομου πράκτορα για το συνεργατικό παίγνιο "Pandemic"
Creators: name: Βολουδακης Κωνσταντινος
Publisher: name: Technical University of Crete
Year: 2021

description: Artificial Intelligence (AI) has in our times made considerable progress, and manifests itself in various devices and infrastructure used in our everyday lives. It has thus become even more important than ever to measure AI’s progress via pitting intelligent agents against humans in board games, following a decades-long tradition. Still, testing AI in board games that require the players’ cooperation without any element of competition among them during a game instance, is extremely rare. At the same time, this is important since the ability to cooperate effectively is a key component of intelligence. Against this background, in this thesis we develop the necessary server infrastructure that enables the participation of autonomous agents in the multiagent cooperative board game "Pandemic"; along with seven autonomous agents that can compete in the game, each of which incorporating different strategies that we also devised. Our server has already been used in the context of an AI-related course at the Technical University of Crete, and can provide the basis for a richer infrastructure that can be potentially employed for holding an international challenge for Pandemic-playing autonomous agents. We complement our work with a preliminary experimental evaluation of our agents’ strategies, drawing lessons on their effectiveness in Pandemic domains of varying difficulty.
description: Η Τεχνητή Νοημοσύνη (AI) έχει σημειώσει σημαντική πρόοδο στην εποχή μας, και απαντάται σε διάφορες συσκευές και υποδομές που χρησιμοποιούμε καθημερινά. Συνεπώς, έχει γίνει πιο σημαντικό από ποτέ, η μέτρηση της προόδου της τεχνητής νοημοσύνης μέσω του ανταγωνισμού ευφυών πρακτόρων ενάντια ανθρώπων σε επιτραπέζια, ακολουθώντας μια παράδοση πολλών χρόνων. Ακόμα η δοκιμή της τεχνητής νοημοσύνης σε επιτραπέζια που απαιτούν τη συνεργασία των παικτών, χωρίς το στοιχείο του ανταγωνισμού μεταξύ τους κατά τη διάρκεια του παιχνιδιού, είναι εξαιρετικά σπάνια. Στο πλαίσιο αυτό, σε αυτή τη διπλωματική αναπτύσσουμε την απαραίτητη υποδομή ενός διακομιστή που επιτρέπει τη συμμετοχή αυτόνομων πρακτόρων, στο συνεργατικό επιτραπέζιο παιχνίδι “Pandemic” σε συνδυασμό με αρκετούς αυτόνομους πράκτορες που μπορούν να παίξουν το παιχνίδι αυτό, καθένας από αυτούς με διαφορετικές στρατηγικές τις οποίες επίσης σχεδιάσαμε. Ο διακομιστής μας έχει ήδη χρησιμοποιηθεί στο πλαίσιο ενός μαθήματος που σχετίζεται με την τεχνητή νοημοσύνη στο Πολυτεχνείο Κρήτης, και μπορεί να παρέχει τη βάση για μια πληρέστερη υποδομή που μπορεί ενδεχομένως να χρησιμοποιηθεί για την διεξαγωγή ενός διεθνούς διαγωνισμού αυτόνομων πρακτόρων που παίζουν το επιτραπέζιο αυτό. Συμπληρώνουμε την δουλειά μας με μια προκαταρκτική αξιολόγηση των στρατηγικών των πρακτόρων μας, αντλώντας συμπεράσματα από την αποτελεσματικότητά τους σε περιβάλλοντα μεταβλητής δυσκολίας του Pandemic.
Cubic Casimir operator of SU$_C$(3) and confinement in the nonrelativistic quark model
Creators: name: Dmitrasinovic, V.
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Only two-body [${\rm F}_{i} \cdot {\rm F}_{j}$] confining potentials have been considered, thus far, in the quark model without gluons, which by construction can only depend on the quadratic Casimir operator of the colour SU(3) group. A three-quark potential that depends on the cubic Casimir operator is added to the quark model. This results in improved properties of $q^3$ colour non-singlet states, which can now be arranged to have (arbitrarily) higher energy than the singlet, and the "colour dissolution/anticonfinement" problem of the ${\rm F}_{i} \cdot {\rm F}_{j}$ model is avoided.
description: 10 pages, 2 tables, RevTex, to appear in Phys. Lett. B
Single-Source-Publishing für alle: Anpassung des métopes-Systems an projektspezifische Publikationsworkflows
Creators: name: Thoden, Klaus
Publisher: name: Zenodo
Year: 2019
Subjects: XML
Workflow
Elektronisches Publizieren
Open Access

description: Elektronisches Publizieren ermöglicht, dass Inhalte in unterschiedlichen Formaten für unterschiedliche Endgeräte angeboten werden können. Neben einer PDF-Version könnten dies Formate für eReader (EPUB) oder browserbasierte Ansichten sein. Um die inhaltliche Gleichartigkeit der Ausgabeformate sicherzustellen, ist es wichtig, dass ein Workflow existiert,der aus einer Quelle die verschiedenen Ausgaben einfach erzeugen kann. Dieses Verfahren wird auch als Single-Source-Publishing bezeichnet
 Das französische System métopes stellt eine nahezu komplette Lösung für diese Problemstellung zur Verfügung. Diese besteht aus einer Formatvorlage für Word-Dateien und einem Plugin für das frei verfügbare (aber nicht quellenoffene) Programm XML Editor von XMLmind. Damit existiert ein zentrales Textbearbeitungswerkzeug auf Basis von TEI-XML-Dateien samt Import- und Exportfunktionen.
 Die Verbreitung von métopes konzentriert sich derzeit auf Frankreich und unterstützt somit vornehmlich die dortigen Publikationskanäle wie OpenEdition und cairn.info. Generische Ausgabeformate wie EPUB, JATS/BITS, HTML und InDesign stehen aber auch zur Verfügung und können in ihren Designs selbstverständlich weiter angepasst werden. Im Projekt Edition Open Access wurden solche Anpassungen vorgenommen, und seit Anfang des Jahres wird das System produktiv eingesetzt.
 Schon durch einfache Konfigurationen kann das System an die Bedürfnisse von einzelnen Publikationsprojekten angepasst werden. Das beinhaltet zum einen die Anpassung von CSS-Stylesheets für die WYSIWYG-Ansicht, andererseits auch die Einbindung von bestehenden XSL-Skripten für Textmanipulationen, die Generierung von Ausgabeformaten oder die Einbindung eigener XML-Schemata sowohl zur Validierung als auch zur Unterstützung beim Editieren.
Superchiral photons unveil magnetic circular dichroism
Creators: name: Lovesey, S. W.
name: Collins, J. T.
name: Collins, S. P.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Polarization-dependent photon spectroscopy (dichroism) using signal-enhancing superchiral beams is shown to be sensitive to magnetic properties of the sample, whereas previous investigations explored charge-like electronic properties of chiral samples. In the process of unveiling the potential to observe magnetic circular dichroism (MCD), we underline an affinity between spectroscopies using the Borrmann effect, twisted beams and superchiral beams. Use of an effective wavevector in a quantum-mechanical theory unites the aforementioned spectroscopies and vastly improves our understanding of their advantages. Exploiting an effective wavevector for superchiral beams, natural circular dichroism (NCD) is derived from electric dipole - magnetic dipole (E1-M1) and electric dipole - electric quadrupole (E1-E2) absorption events, and MCD is derived from electric quadrupole-electric quadrupole (E2-E2) absorption. Signal enhancement by superchiral beams is a straightforward gain for the user because NCD and MCD are otherwise precisely the same as for a circularly polarized beam, according to our calculations. Our analysis shows that enhancement of E2-E2 is superior to that available for parity-odd events under consideration. Electronic degrees of freedom in all dichroic signals are encapsulated in atomic multipoles that are frequently used in theoretical interpretations of several established experimental techniques.
Additional file 1: of MiR-190a potentially ameliorates postoperative cognitive dysfunction by regulating Tiam1
Creators: name: Liu, Qiang
name: Hou, Aisheng
name: Zhang, Yongyi
name: Guo, Ying
name: Li, Jingjing
name: Yao, Yinghao
name: Niu, Kaimeng
name: Li, Hao
name: Ma, Yunlong
name: Cao, Jiangbei
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Computational Biology

description: Table S1. The primer sequence of the validated miRNA. i.e., the primer sequence of mmu-miR-190a-3p used for real-time PCR assay. Table S2. Predictionbinding sites for mmu-miR-190a-3p. The data were predicted by using miRwalk 3.0 for obtaining reliable targets for mmu-miR-190a-3p. Table S3. Genes and miRNAs involved in red module. This red module were generated by using our co-expression weighted network analysis by combined the 314 mRNA and 5 miRNAs data. (DOCX 49 kb)
A model for anomalous directed percolation
Creators: name: Hinrichsen, Haye
name: Howard, Martin
Publisher: name: arXiv
Year: 1998
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We introduce a model for the spreading of epidemics by long-range infections and investigate the critical behaviour at the spreading transition. The model generalizes directed bond percolation and is characterized by a probability distribution for long-range infections which decays in $d$ spatial dimensions as $1/r^{d+σ}$. Extensive numerical simulations are performed in order to determine the density exponent $β$ and the correlation length exponents $ν_{||}$ and $ν_\perp$ for various values of $σ$. We observe that these exponents vary continuously with $σ$, in agreement with recent field-theoretic predictions. We also study a model for pairwise annihilation of particles with algebraically distributed long-range interactions.
description: RevTeX, 9 pages, including 6 eps-figures
Growth of layered Lu$_2$Fe$_3$O$_7$ and Lu$_3$Fe$_4$O$_{10} $ single crystals exhibiting long-range charge order via the optical floating-zone method
Creators: name: Hammouda, Sabreen
name: Angst, Manuel
Publisher: name: arXiv
Year: 2019
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We report the controlled growth of single crystals of intercalated layered Lu$ _{1+n} $Fe$ _{2+n} $O$ _{4+3n-δ} $ ($ n $=1,2) with different oxygen stoichiometries $δ$. For the first time crystals sufficiently stoichiometric to exhibit superstructure reflections in X-ray diffraction attributable to charge ordering were obtained. The estimated correlation lengths tend to be smaller than for not intercalated LuFe$ _2 $O$ _4$. For Lu$ _2 $Fe$ _3 $O$ _7 $, two different superstructures were observed, one an incommensurate zigzag pattern similar to previous observations by electron diffraction, the other an apparently commensurate pattern with ($\frac{1}{3}\frac{1}{3}0$) propagation. Implications for the possible charge order in the bilayers are discussed. Magnetization measurements suggest reduced magnetic correlations and the absence of an antiferromagnetic phase.
description: 7pages, 7figures
Massive two--loop integrals in renormalizable theories
Creators: name: Ghinculov, A.
name: Yao, Y. -P.
Publisher: name: arXiv
Year: 1997
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We propose a framework for calculating two-loop Feynman diagrams which appear within a renormalizable theory in the general mass case and at finite external momenta. Our approach is a combination of analytical results and of high accuracy numerical integration, similar to a method proposed previously for treating diagrams without numerators. We reduce all possible tensor structures to a small set of scalar integrals, for which we provide integral representations in terms of four basic functions. The algebraic part is suitable for implementing in a computer program for the automatic generation and evaluation of Feynman graphs. The numerical part is essentially the same as in the case of Feynman diagrams without numerators.
description: to appear in Nucl. Phys. B
challenge based innovation for humanitarian purposes
Creators: name: Wandl-Vogt, Eveline
name: Dorn, Amelie
name: Senabre, Enric
name: Jennings, James
name: Reale, Giuseppe
name: Potamianos, Karolos
Publisher: name: Zenodo
Year: 2019

description: challenge based innovation for humanitarian purposes
Phthiraptera Haeckel 1896
Creators: name: Gustafsson, Daniel R.
name: Tian, Chunpo
name: Ren, Mengjiao
name: Liu, Zhixiao
name: Yu, Xiaoping
name: Zou, Fasheng
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Phthiraptera

description: Phthiraptera Haeckel 1896: 703.  Ischnocera Kellogg, 1896  Ischnocera Kellogg, 1896: 63.
description: Published as part of Gustafsson, Daniel R., Tian, Chunpo, Ren, Mengjiao, Liu, Zhixiao, Yu, Xiaoping & Zou, Fasheng, 2021, Four new species of Guimaraesiella (Phthiraptera: Ischnocera: Brueelia-complex) from China, pp. 333-352 in Zootaxa 5060 (3) on page 334, DOI: 10.11646/zootaxa.5060.3.2, http://zenodo.org/record/5635813
Optical transitions in broken gap heterostructures
Creators: name: Halvorsen, E.
name: Galperin, Y.
name: Chao, K. A.
Publisher: name: arXiv
Year: 2000
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: We have used an eight band model to investigate the electronic structures and to calculate the optical matrix elements of InAs-GaSb broken gap semiconductor heterostructures. The unusual hybridization of the conduction band states in InAs layers with the valence band states in GaSb layers has been analyzed in details. We have studied the dependence of optical matrix elements on the degree of conduction-valence hybridization, the tuning of hybridization by varying the width of the GaSb layers and/or InAs layers, and the sensitivity of quantized levels to this tuning. Large spin-orbit splitting in energy bands has been demonstrated. Our calculation can serve as a theoretical modeling for infrared lasers based on broken gap quantum well heterostructures.
description: 8 pages, 10 figures. Accepted to Phys. Rev. B
Calculating coherent light-wave propagation in large heterogeneous media
Creators: name: Vettenburg, Tom
name: Horsley, Simon A. R.
name: Bertolotti, J.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Computational Physics (physics.comp-ph)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Understanding the interaction of light with a highly scattering material is essential for optical microscopy of optically thick and heterogeneous biological tissues. Ensemble-averaged analytic solutions cannot provide more than general predictions for relatively simple cases. Yet, biological tissues contain chiral organic molecules and many of the cells' structures are birefringent, a property exploited by polarization microscopy for label-free imaging. Solving Maxwell's equations in such materials is a notoriously hard problem. Here we present an efficient method to determine the propagation of electro-magnetic waves in arbitrary anisotropic materials. We demonstrate how the algorithm enables large scale calculations of the scattered light field in complex birefringent materials, chiral media, and even materials with a negative refractive index.
Three-quark exchange operators, crossing matrices and Fierz transformations in SU(2) and SU(3)
Creators: name: Dmitrasinovic, V.
Publisher: name: arXiv
Year: 2001
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We give explicit expressions for the three-quark exchange operators, crossing matrices and Fierz transforms for the SU(2) and SU(3) groups. We identify the invariant terms in these operators and express them in terms of Casimir operators.
description: 8 pages, RevTex, to appear in Jour. Math. Phys
Additional file 3: of Acting locally - affecting globally: RNA sequencing of gilthead sea bream with a mild Sparicotyle chrysophrii infection reveals effects on apoptosis, immune and hypoxia related genes
Creators: name: M. Piazzon
name: Mladineo, Ivona
name: Naya-Català, Fernando
name: Dirks, Ron
name: Jong-Raadsen, Susanne
name: Vrbatović, Anamarija
name: Hrabar, Jerko
name: Pérez-Sánchez, Jaume
name: Sitjà-Bobadilla, Ariadna
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Pathway classification of DE genes. Bar plots representing the percentage of proteins involved in each broad Reactome pathway. The column labelled Reactome was added as a reference to show the percentage of genes in each category in the database. The other columns represent the percentage of differentially expressed (DE) genes in each category when considering all DE genes in all the tissues of the current experiment (Total) or per tissue, when compared to the control uninfected group. Gill samples are separated in parasitized (P) and non-parasitized (NP) gill sections. (PDF 343 kb)
Neutrino propagation in a random magnetic field
Creators: name: Sahu, Sarira
Publisher: name: arXiv
Year: 1997
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The active-sterile neutrino conversion probability is calculated for neutrino propagating in a medium in the presence of random magnetic field fluctuations. Necessary condition for the probability to be positive definite is obtained. Using this necessary condition we put constraint on the neutrino magnetic moment from active-sterile electron neutrino conversion in the early universe hot plasma and in supernova.
description: 11 pages
Adatom Diffusion at GaN (0001) and (000bar1) Surfaces
Creators: name: Zywietz, T.
name: Neugebauer, J.
name: Scheffler, M.
Publisher: name: arXiv
Year: 1998
Subjects: subject: Condensed Matter (cond-mat)
subject: FOS: Physical sciences

description: The diffusion of Ga and N adatoms has been studied for the technologically relevant wurtzite (000bar1) and (0001) surfaces employing density-functional theory. Our calculations reveal a very different diffusivity for Ga and N adatoms on the equilibrium surfaces: While Ga is very mobile at typical growth temperatures, the diffusion of N is by orders of magnitudes slower. These results give a very detailed insight of how and under which growth conditions N adatoms can be stabilized and efficiently incorporated at the surface. We further find that the presence of excess N strongly increases the Ga diffusion barrier and discuss the consequences for the growth of GaN.
description: 4 pages, 4 figures, Appears in Appl. Phys. Lett. Other related publications can be found at http://www.rz-berlin.mpg.de/th/paper.html
Electronic and Optical Properties of Functionalized GaN (10-10) Surfaces using Hybrid-Density Functionals
Creators: name: Franke, Dennis
name: Lorke, Michael
name: Frauenheim, Thomas
name: da Rosa, Andreia Luisa
Publisher: name: arXiv
Year: 2018
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Adsorption of small ligands on semiconductor surfaces is a possible route to modify these surfaces so that they can be used in biosensing and optoelectronic devices. In this work we perform density-functional theory calculations of electronic and optical properties of small ligands on GaN-(10$\bar1$0) surfaces. From the investigated anchor groups we show that thiol groups introduce states into the GaN band gap. However, these state are not optically active, at least for these perfect surfaces. This means that more realistic surfaces need to be considered to suggest how surface modification can enhance the optical properties of GaN non-polar surfaces.
Additional file 4 of Allergy-related diseases in childhood and risk for abdominal pain-related functional gastrointestinal disorders at 16 years—a birth cohort study
Creators: name: Sjölund, Jessica
name: Kull, Inger
name: Bergström, Anna
name: Järås, Jacob
name: Ludvigsson, Jonas F.
name: Törnblom, Hans
name: Simrén, Magnus
name: Olén, Ola
Publisher: name: figshare
Year: 2021
Subjects: Medicine
Cell Biology
Biotechnology
Chemical Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Science Policy

description: Additional file 4 Associations between childhood allergy-related diseases and any AP-FGID and IBS at 16y. a Cases refers to children with any AP-FGID/IBS at 16y. Non-cases refers to children with no AP-FGID at 16y. The column shows the number of cases and non-cases exposed (yes) vs. unexposed (no) to asthma/rhinitis/eczema/food hypersensitivity at different ages. b Pearson’s chi-squared test. Statistically significant differences of the AR of developing AP-FGID/IBS at 16y between children exposed and children unexposed to asthma/rhinitis/eczema/food hypersensitivity are shown in bold text. c Age-specific and overall (any report from 1y through 16y) associations assessed in a binomial generalized linear model with a log link function. Children with no AP-FGID at 16y were used as the reference group in all analyses. Statistically significant associations are marked in bold text. Abbreviations: AP-FGID, abdominal pain-related functional gastrointestinal disorder; AR, absolute risk; aRR, adjusted relative risk; CI, confidence interval; IBS, irritable bowel syndrome; N, number; RR, relative risk; Y, years.