Sclerotinia cirsii-spinosissimi Senn-Irlet 2016
Creators: name: Senn-Irlet, Beatrice
name: Peter, Martina
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Fungi
Ascomycota
Leotiomycetes
Helotiales
Sclerotiniaceae
Sclerotinia
Sclerotinia cirsii-Spinosissimi

description: <i>Sclerotinia cirsii-spinosissimi</i> Senn-Irlet <i>sp. nov.</i> — MycoBank 516616, Plate 1-3. <i>Apothecia solitaria, discus acetabuliformis,</i> 5-12 <i>mm diam, stipitatus, hymenio brunneo, stipes cylindraceus, colore simile disco,</i> 5–20 × 0.8–1.5 <i>mm. Asci cylindracei,</i> † (120–)130–170 × 7–9 <i>μm, octospori, poro jodo caerulescenti. Ascosporae uniseriatae, hyalinae, elipsoideae, inaequilaterales,</i> † 9.5–11.8 × 4.7–6.6 <i>μm. Microconidia</i> 2–4 <i>μm diam., globosae, in sporodochiis in hymenio vel in vitro. Sclerotia tuberoidea,</i> 4–8 × 1.5–4 <i>mm, extus nigra, intus albida.</i> Habitat in bracteas Cirsii spinosissimi in regio alpina, Helvetia. Holotypus: Senn-Irlet 96/32, Uri, Attinghausen, 31 Augusto 1996, <i>in herbario</i> Z-ZT <i>conservatur.</i> <b>Etymology —</b> Refers to the species name of the plant host. <b>Apothecia</b> arising singly or rarely in pairs or in triplet from a true sclerotium, embedded in fallen old, last-year bracts of <i>Cirsium spinosissimum</i> lying on the soil (Plate 1a); receptacle 5–12 mm diam., 2–4 mm high, cupulate or discoid with a central depression; hymenium ochraceous to burnt Sienna, smooth; stipe cylindrical, often flexuous, 5–20 × 0.8–1.5 mm, tapering towards base, concolorous or paler than hymenium, glabrous to felted under hand lens. <b>Asci</b> arising from croziers, cylindric–clavate, (*) 140–180 × 9– 10.5 Μm, (†) (120–) 130–140 × 7–9 Μm, with a tapering, blunt–end base, regularly 8–spored, all spores of about equal size, apex truncated-rounded,apical pore MLZ+ blue, IKI blueish, deep blue in MLZ after KOH (Plate 2d). <b>Ascospores</b> (*) 11.3–15.3 (17) × 5.7–7.1 Μm (fresh in H2O), Q = 1.6–2.4, mean Q = 2.04, (†) (8) 9.5–11.8 (14.5) × 4.7–6.6 Μm, Q = 1.5–2.2 (in Congo red and 5% KOH) mean Q = 1.85, (†) uniseriate, young in ascus biseriate, hyaline, unicellular, ellipsoid and slightly inequilateral, eguttulate, with two (to four?) nuclei, content (†) cyanophilous (in Cotton blue), IKI wall hyaline, content yellow. <b>Microconidial state</b> with microconidia globose, hyaline, 2– 4 Μm diam., produced from phialides in sporodochia (Plate 1f), superficial in hymenium of older apothecia from germinating ascospores, especially towards margin. <b>Paraphyses</b> filiform, septate, simple or sparsely branched, hyaline, in upper part 3–4 Μm wide, fresh with large pale brown guttules in the upper cells, without gelatinous covering, even in living state. <b>Subhymenium</b> 45–60 Μm, of densely septate, prismatic cells, brown-walled, reddish brown. <b>Medullary excipulum</b> of loosely interwoven, filiform, 2–5 Μm wide, colourless hyphae, forming a textura intricata, 40–250 Μm thick, without crystals, no blueing in IKI. <b>Ectal excipulum</b> 50–150 Μm, 3– 5 cells thick, of pale brown angular to prismatic cells, 20–35 × 10– 16 Μm in size, orientated perpendicularly to apothecial surface. No gelatinous matrix observed. <b>Stipe</b> composed of a medullary excipulum forming a <i>textura porrecta</i>, composed of thin-walled, elongated, 5–8 Μm wide, hyaline cells, and an ectal excipulum, 8–20 Μm thick, of 2–3 rows of elongated, light brown, thin-walled cells, forming a <i>textura angularis</i>, outermost cells often with short outgrowths. Both textures arranged parallel to the stipe axis. <b>Pigment</b> brownish, membranaceous, in subhymenium, and outer cells of the stipe, intracellular in paraphyses. <b>Stroma</b> an irregular tuberoid sclerotium (Plate 1b), globose to cylindrical, constricted and often furrowed, variable in shape, 4–8 × 1.5–4 mm, with scrobiculate, black outer rind and white inner context, developing within fallen, straw-like involucral bracts of <i>Cirsium spinosissimum</i>, but never incorporating remnants of plant material. Sclerotial rind two to four cells wide, of dark brown-walled, angular to prismatic cells, outermost cells heavily melanized, carbonaceous; uppermost cells pale brown, cells compact,(†) 12–20 × 6– 10 Μm, forming a <i>textura angularis</i> to <i>textura oblita</i>, sclerotial medulla of interwoven, hyaline hyphae, 4–6 Μm wide, forming a textura oblita-intricata, walls gelatinized, without apparent remnants of host tissue. Ascospores germinate readily on PDA and MA, mycelium whitish, adhering to the agar surface, after 4–6 weeks applanate sclerotia are produced regularly spread over the whole surface of the petridish on PDA (Plate 1c), half to three quarter immerged, irreguarly spread and larger (up to 12 × 7 mm) on MA. 18 days after inoculation scattered flocculose tufts produced small globular sporodochia, with conidia born on phialides on aerial mycelium, phialides with no obvious collarettes,conidia globose to slightly ovate, 2.5–4 Μm in diam., with one internal guttule. The ITS sequences of the five isolates of <i>Sclerotinia cirsii-spinosissimi</i> collected from different locations in Switzerland were identical. Parsimony analysis revealed 44 of the 514 characters to be parsimony informative.The analysis yielded 530 most parsimonious trees (MPTs) which were reduced to 48 after reweighting (cf. HOLST- JENSEN <i>et al</i>., 1998). <i>S. cirsii-spinosissimi</i> was consistently placed in a cluster with <i>S. borealis</i>, which was supported by the strict consensus tree and a bootstrap value of 64% (Fig. 6). In 32 of the 48 MPTs, <i>S. nivalis</i> clustered with <i>S. glacialis</i> (52% bootstrap). <b>Substratum —</b> <i>Sclerotinia cirsii-spinosissimi</i>, always on <i>Cirsium spinosissimum</i>. <b>Distribution —</b> Europe, Alps. <b>Specimens examined.</b> SWITZERLAND – Uri, Attinghausen-Geissberg, 1740 m alt., 31 August 1996, B. Senn-Irlet &amp; R. Mürner (ZT, holotype, BSI 96/32, culture isolate, NCBI GQ848548); Spirigen-Kinzigpass, 2070 m alt., 19 August 2001, B. Senn-Irlet &amp; R. Mürner (ZT, BSI 01/194); – Bern, Guttannen-Oberaar, 2330 m alt., 30 August 1994, B. Senn-Irlet (ZT, BSI 94/43); 15 August 1995, H.U. Aeberhard &amp; B. Senn-Irlet (ZT, BSI 95/150, culture isolate, <i>Sclerotinia</i> spec 2 <i>sensu</i> HOLST- JENSEN <i>et al.</i>, 1997), 8 August 1998, H.U. Aeberhard (ZT, 024.98), 2 September 2004 (ZT, BSI 04/130, NCBI EU330398), 17 August 2010, B. Senn-Irlet (ZT, BSI 10/63), 22 August 2010, H. Woltsche (ZT, BSI 10/93); – Graubünden, Bivio, near Leg Grevasalvas, 2460 m alt., B. Senn-Irlet (ZT, BSI 03/80, NCBI EU330399); – Ticino, Bedretto, Ponte di Paltano, 1840 m alt., 20 August 2002, H.Woltsche &amp; B. Senn-Irlet (ZT, BSI 02/79); – Valais,Val d’Anniviers, Moiry, 21 August 2010, B. Senn-Irlet (ZT, BSI 10/83). <i>Sclerotinia nivalis</i> Saito: JAPAN – Hokkaido, Makubedtsu-cho, on <i>Arctium lappa</i>, 15 May 1982, I. Saito (HAK, Holotype, 24055, NCBI EU 330400). Habitat and ecology <i>Sclerotinia cirsii-spinosissimi</i> was exclusively found in association with <i>Cirsium spinosissimum</i>, a widespread, abundant forb of the lower alpine zone of the Alps, forming clones (URBANSKA, 1992) on pastures and near rivulets, especially at nutrient rich sites with forb vegetation and in scree vegetation, often at places indirectly favoured by cattle. The apothecia were always found on the involucral bracts from the almost intact, fallen inflorescenses from the previous year below the forb plant, profiting thus from a favourable humid microclimate.The accompanying macromycetes found were <i>Peziza granularis</i> Donadini, <i>Ombrophila</i> spec., <i>Scutellinia</i> spec., <i>Tarzetta cu-</i> Plate 1 – <i>Sclerotinia cirsii-spinosissimi</i> a) Fresh fruit-bodies from holotype (coll. BSI 96/32); b) Sclerotia (coll. 024.98); c) Sclerotia on PDA in culture after 2 months (isolate from BSI 96/32); d) Ectal excipulum, fresh in water (coll. BSI 10/93); e) Ascospores, fresh in water (coll. BSI 10/63); f) Microconidia in hymenium, in water (coll. BSI 10/83); g) Paraphyses in water (coll. BSI 10/83); h) Ascus apex in Lugol (coll. BSI 10/93). Bars = 10 Μm, 1 cm in a), b) and c). <i>pularis</i> (L.) Svr&amp;ccaron;ek, and <i>Hemimycena ochrogaleata</i> (J. Favre) M.M. Moser. Involucral bracts of <i>Cirsium spinosissimum</i> lying beyond the forb plant on open grassland are often infected by <i>Crocicreas calathicola</i> (Rehm) S.E. Carpenter, a saprotrophic ascomycete with orange coloured apothecia. <i>Sclerotinia cirsii-spinosissimi</i> and <i>Crocicreas calathicola</i> were never found together suggesting that microclimatic conditions were required for germination and establishment, and humid conditions favoured <i>Sclerotinia</i>. A necrotrophic life-form is suggested as no signs of reduced plant growth or flowering has been observed.
description: Published as part of <i>Beatrice Senn-Irlet &amp; Martina Peter, 2016, Sclerotinia cirsii-spinosissimi, a new species from the Alps, pp. 235-240 in Ascomycete. org 8 (5)</i> on pages 236-238, DOI: 10.5281/zenodo.1040189
description: {"references": ["HOLST- JENSEN A., VAAGE M. &amp; SCHUMACHER T. 1998. - An approximation to the phylogeny of Sclerotinia and related genera. Nordic Journal of Botany, 18: 705 - 719", "HOLST- JENSEN A., KOHN L. M. &amp; SCHUMACHER T. 1997. - Nuclear rDNA phylogeny of Sclerotiniaceae. Mycologia, 89: 885 - 899.", "URBANSKA K. M. 1992. - Populationsbiologie der Pflanzen. Stuttgart, UTB."]}