cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Eugenia acapulcensis Steudel, Nomencl. Bot.
Creators: name: Uc Gala, Victor C.
name: Valdemarin, Karinne Sampaio
name: Lucas, Eve
name: Negrão, Raquel
name: Mazine, Fiorella F.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Myrtaceae
Eugenia
Eugenia acapulcensis

description: 1. Eugenia acapulcensis Steudel, Nomencl. Bot., ed. 2, 1: 601 (1840)
= Eugenia campechiana Lundell, Contr. Univ. Michigan Herb. 7: 32 (1942).
EOO: 5,208,765.006 km ². AOO: 1,148.00 km². Evaluation of IUCN: Least Concern.
This species has a wide distribution in the American continent, occurring from Mexico to Brazil, in addition to the Antilles (WCSP 2020). In the Mexican territory it is known in 13 states, with records in the northwest, northeast (states along the Gulf of Mexico coast), central, southwest, and southeast Mexico and the Yucatan Peninsula. The species’ habitats occur in remnants of Humid and Dry tropical forests. There are two occurrence records in two important Mexican reserves for the protection of biodiversity managed by the National Commission of Protected Natural Areas (CONANP). These are the “Calakmul Biosphere Reserve” and the “Selva el Ocote Biosphere Reserve” (INE-SEMARNAP 1999a, CONANP 2001). In Belize there are records in the Mountain Pine Ridge Forest Reserve and in Guatemala in the Maya Biosphere Reserve. The estimated extent of occurrence (EOO) exceeds the thresholds for a threatened category under the criterion B. Eugenia acapulcensis area of occupancy (AOO) would likely exceed the threshold of a threatened category when remaining habitat available is considered since the species occurs within several protected areas. However, the area of occupancy (AOO) is underestimated due to its low habitat specificity and unbalanced surveys across its entire range. According to recent assessment by BGCI & IUCN (2019a), the species is currently in the Least Concern (LC) category.
Specimens examined:— MEXICO. Campeche: Matuda 3847 (MEXU!); Chiapas: Ton 3541 (F); Guerrero: Freeland & Spetzman 134 (MEXU!); Hidalgo: Zamora & Peter´s 1361 (MEXU!); Jalisco: Delgadillo & Contreras 5819 (MEXU!); Mexico: Matuda et al. 30413 (MEXU!); Michoacán: S/A 1062 (K!); Nayarit: McVaugh 14899 (MEXU!); Oaxaca: Torres & Martínez 7384 (MEXU!); Quintana Roo: Cabrera 17058 (MEXU!); Sinaloa: Aviña & García 9213 (MEXU!); Tabasco: Matuda 3194 (F); Tamaulipas: Martínez 566 (MEXU!); Veracruz: Ventura 11502 (MEXU!); Yucatán: Kú & Yam 272 (MEXU!). Belize: Gentle 3647 (MICH); Colombia: Cumming 1113 (K!); Costa Rica: Davidse & Herrera 30896 (MO); Guatemala: Lundell y Contreras 18878 (LL); Honduras: Molina et al. 31461 (MO); Nicaragua: Stevens 20781 (MO); Panama: Macbride 2783 (F); El Salvador: Witsberger 700 (MICH).
description: Published as part of Uc Gala, Victor C., Valdemarin, Karinne Sampaio, Lucas, Eve, Negrão, Raquel & Mazine, Fiorella F., 2023, Eugenia (Myrtaceae) from Mexico: checklist, distribution, and conservation assessments, pp. 99-140 in Phytotaxa 583 (2) on page 103, DOI: 10.11646/phytotaxa.583.2.1, http://zenodo.org/record/7609258
Additional file 1: of Risk factors for the development of autism spectrum disorder in children with tuberous sclerosis complex: protocol for a systematic review
Creators: name: Mitchell, Rebecca
name: Barton, Sarah
name: A. Harvey
name: Williams, Katrina
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology

description: The full search strategy. (PDF 636 kb)
Eugenia aeruginea De Candolle, Prodr.
Creators: name: Uc Gala, Victor C.
name: Valdemarin, Karinne Sampaio
name: Lucas, Eve
name: Negrão, Raquel
name: Mazine, Fiorella F.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Myrtaceae
Eugenia
Eugenia aeruginea

description: 2. Eugenia aeruginea De Candolle, Prodr. 3: 283 (1828)
EOO: 734,584.263 km ². AOO: 388 km ². Evaluation of IUCN: Least Concern.
Eugenia aeruginea is distributed in southeastern Mexico, in the states of Veracruz, Oaxaca, Tabasco, Chiapas, Campeche, Quintana Roo and Yucatán, continental countries of Central America, also in Cuba and Jamaica (WCSP 2020), from 0–600 m elev. In the Mexican territory it is known in Humid and Dry Tropical Forest biomes, as well as in mangrove and swamps. One hundred and thirty-five records of collections were found in Mesoamerica, from Mexico, Guatemala, Belize, Honduras, and Costa Rica. The estimated extent of occurrence (EOO) exceeds the threshold for a threatened category under criterion B (IUCN, 2012). The area of occupancy (AOO) of Eugenia aeruginea would likely exceed the threshold of any threatened category when the remaining habitat available is taken in account, due to its low habitat specificity and unbalanced surveys in its entire range. Eugenia aeruginea is classified here as Least Concern (LC).
Specimens examined:— MEXICO. Campeche: Lundell 850 (K!); Chiapas: Aguilar et al. 7597 (MEXU!); Oaxaca: Lorence & Cedillo 4257 (MEXU!); Quintana Roo: Cabrera & Cabrera 6700 (MEXU!); Tabasco: Delgadillo 4462 (MEXU!). Belize: Whitefoord 2146 (BM); Costa Rica: Brad Boyle 7190 (MO). Guatemala: Contreras 9059 (LL); Honduras: Zelaya 171 (MO).
description: Published as part of Uc Gala, Victor C., Valdemarin, Karinne Sampaio, Lucas, Eve, Negrão, Raquel & Mazine, Fiorella F., 2023, Eugenia (Myrtaceae) from Mexico: checklist, distribution, and conservation assessments, pp. 99-140 in Phytotaxa 583 (2) on page 103, DOI: 10.11646/phytotaxa.583.2.1, http://zenodo.org/record/7609258
Additional file 2: Table S4. of EcoTILLING by sequencing reveals polymorphisms in genes encoding starch synthases that are associated with low glycemic response in rice
Creators: name: Ramadoss Raja
name: Somanath Agasimani
name: Jaiswal, Sarita
name: Venkatesan Thiruvengadam
name: Sabariappan, Robin
name: Ravindra Chibbar
name: Ram, Sundaram
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Virology
subject: Computational Biology

description: PCR reaction conditions followed for the amplification of EcoTILLING fragments. (DOCX 14 kb)
Additional file 3: Figure S1. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils
Creators: name: Yu, Li
name: Tengfei Ma
name: Yuqin Zhang
name: Hu, Ying
name: Yu, Ke
name: Yueyue Chen
name: Haoli Ma
name: Zhao, Jie
Publisher: name: Figshare
Year: 2017
Subjects: subject: Cell Biology
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences

description: The saturation analysis. (PDF 314Â kb)
Additional file 3: Figure S1. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils
Creators: name: Yu, Li
name: Tengfei Ma
name: Yuqin Zhang
name: Hu, Ying
name: Yu, Ke
name: Yueyue Chen
name: Haoli Ma
name: Zhao, Jie
Publisher: name: Figshare
Year: 2017
Subjects: subject: Cell Biology
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: The saturation analysis. (PDF 314Â kb)
Additional file 6: Table S2. of EcoTILLING by sequencing reveals polymorphisms in genes encoding starch synthases that are associated with low glycemic response in rice
Creators: name: Ramadoss Raja
name: Somanath Agasimani
name: Jaiswal, Sarita
name: Venkatesan Thiruvengadam
name: Sabariappan, Robin
name: Ravindra Chibbar
name: Ram, Sundaram
Publisher: name: Figshare
Year: 2017
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Details of gene specific primers designed to amplify EcoTILLING fragments. (DOCX 14 kb)
Additional file 3: Table S5. of EcoTILLING by sequencing reveals polymorphisms in genes encoding starch synthases that are associated with low glycemic response in rice
Creators: name: Ramadoss Raja
name: Somanath Agasimani
name: Jaiswal, Sarita
name: Venkatesan Thiruvengadam
name: Sabariappan, Robin
name: Ravindra Chibbar
name: Ram, Sundaram
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: PCR cycle condition and composition standardized for the amplification of different EcoTILLING fragments in candidate genes. (DOCX 14 kb)
Additional file 4: Table S6. of EcoTILLING by sequencing reveals polymorphisms in genes encoding starch synthases that are associated with low glycemic response in rice
Creators: name: Ramadoss Raja
name: Somanath Agasimani
name: Jaiswal, Sarita
name: Venkatesan Thiruvengadam
name: Sabariappan, Robin
name: Ravindra Chibbar
name: Ram, Sundaram
Publisher: name: Figshare
Year: 2017
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Computational Biology

description: Super pool wise sequencing statistics. (DOCX 15 kb)
Eugenia alnifolia McVaugh, Fieldiana, Bot.
Creators: name: Uc Gala, Victor C.
name: Valdemarin, Karinne Sampaio
name: Lucas, Eve
name: Negrão, Raquel
name: Mazine, Fiorella F.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Myrtaceae
Eugenia
Eugenia alnifolia

description: 3. * Eugenia alnifolia McVaugh, Fieldiana, Bot. 29: 425 (1963)
EOO: 235.686 km ². AOO: 12 km ². Evaluation of IUCN: Endangered.
Eugenia alnifolia has a restricted distribution, with only 3 known collections, being endemic to the state of Michoacán, in the municipality of Coalcoman and Aquila, from 500 to 1,200 m elev. The type of biome in which it occurs is the Dry and Humid tropical forest found in the region known as “Sierra de Coalcoman”.The estimated extent of occurrence (EOO) and area of occupancy (AOO) fall between the thresholds of Critically Endangered and Endangered categories, under the criterion B. The major threat to this species is habitat loss and degradation due to deforestation and territorial conflicts over the Sierra de Coalcoman and its natural resources. There is an inferred continuing decline in quality of habitat due threats, lack of effective actions in environmental policies, and the poor organization from the government entities for territorial ordering and peace. Based on the available records, it is inferred only three locations. Eugenia alnifolia is classified here as Endangered (EN) under the criteria B1ab(iii)+B2ab(iii). Currently, it does not appear to benefit from adequate protection, with no viable subpopulation present in any secure reserve, thus conservation actions such as site protection and seed banking based on field work is strongly recommended, as well as further information to assess population size, local threats, and habitat trend.
Specimen examined:— MEXICO. Michoacán: Hinton 16292 (K!).
description: Published as part of Uc Gala, Victor C., Valdemarin, Karinne Sampaio, Lucas, Eve, Negrão, Raquel & Mazine, Fiorella F., 2023, Eugenia (Myrtaceae) from Mexico: checklist, distribution, and conservation assessments, pp. 99-140 in Phytotaxa 583 (2) on pages 103-104, DOI: 10.11646/phytotaxa.583.2.1, http://zenodo.org/record/7609258
Additional file 23: Figure S8. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils
Creators: name: Yu, Li
name: Tengfei Ma
name: Yuqin Zhang
name: Hu, Ying
name: Yu, Ke
name: Yueyue Chen
name: Haoli Ma
name: Zhao, Jie
Publisher: name: Figshare
Year: 2017
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences

description: The respective expression levels of stigma-specific genes in HY stigma. (PDF 184Â kb)
Additional file 23: Figure S8. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils
Creators: name: Yu, Li
name: Tengfei Ma
name: Yuqin Zhang
name: Hu, Ying
name: Yu, Ke
name: Yueyue Chen
name: Haoli Ma
name: Zhao, Jie
Publisher: name: Figshare
Year: 2017
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: The respective expression levels of stigma-specific genes in HY stigma. (PDF 184Â kb)
Additional file 6: Table S2. of EcoTILLING by sequencing reveals polymorphisms in genes encoding starch synthases that are associated with low glycemic response in rice
Creators: name: Ramadoss Raja
name: Somanath Agasimani
name: Jaiswal, Sarita
name: Venkatesan Thiruvengadam
name: Sabariappan, Robin
name: Ravindra Chibbar
name: Ram, Sundaram
Publisher: name: Figshare
Year: 2017
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Details of gene specific primers designed to amplify EcoTILLING fragments. (DOCX 14 kb)
MOESM18 of Systematic and functional identification of small non-coding RNAs associated with exogenous biofuel stress in cyanobacterium Synechocystis sp. PCC 6803
Creators: name: Guangsheng Pei
name: Sun, Tao
name: Chen, Shuo
name: Chen, Lei
name: Weiwen Zhang
Publisher: name: Figshare
Year: 2017
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Computational Biology

description: Additional file 18: Figure S12. Genome-wide visualization of all sRNA mapping data in pSYSG of Synechocystis. Detailed description is the same as Additional file 2: Figure S1.
Eugenia amatenangensis Lundell, Wrightia
Creators: name: Uc Gala, Victor C.
name: Valdemarin, Karinne Sampaio
name: Lucas, Eve
name: Negrão, Raquel
name: Mazine, Fiorella F.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Myrtaceae
Eugenia
Eugenia amatenangensis

description: 4. * Eugenia amatenangensis Lundell, Wrightia 3: 10 (1961b)
EOO: 11,095.596 km ². AOO: 24 km ². Evaluation of IUCN: Near Threatened.
Eugenia amatenangensis has a known distribution only in the state of Chiapas, exclusively on the tops of the hills, oscillating between 750 and 1,880 m elev. The estimated extent of occurrence (EOO) falls within the thresholds of Vulnerable category whilst the estimated area of occupancy (AOO) falls within the thresholds of the Endangered category, under the criterion B. Six collection records were found in 6 different municipalities, from which is inferred 5 locations due to the proximity between two localities around Horizonte. The type of biome where it occurs is the Humid Montane Forest. The habitat of occurrence of the species is under low threat and is an area of high altitude and low agricultural interest (CONABIO 2018). Therefore, Eugenia amatenangensis is currently classified as Near Threatened (NT) due to restricted distribution and number of locations, meeting the criteria B1a+B2a and it is not under any kind of protected area or conservation measure, even though currently it is not possible to infer a decline of habitat. Thus, attention and further information on population, potential threats and habitat trend are needed to ensure that it would be not threatened in a very short time.
Specimen examined:— MEXICO. Chiapas: Matuda 5832 (MEXU!).
description: Published as part of Uc Gala, Victor C., Valdemarin, Karinne Sampaio, Lucas, Eve, Negrão, Raquel & Mazine, Fiorella F., 2023, Eugenia (Myrtaceae) from Mexico: checklist, distribution, and conservation assessments, pp. 99-140 in Phytotaxa 583 (2) on page 104, DOI: 10.11646/phytotaxa.583.2.1, http://zenodo.org/record/7609258
Additional file 3: Table S5. of EcoTILLING by sequencing reveals polymorphisms in genes encoding starch synthases that are associated with low glycemic response in rice
Creators: name: Ramadoss Raja
name: Somanath Agasimani
name: Jaiswal, Sarita
name: Venkatesan Thiruvengadam
name: Sabariappan, Robin
name: Ravindra Chibbar
name: Ram, Sundaram
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: PCR cycle condition and composition standardized for the amplification of different EcoTILLING fragments in candidate genes. (DOCX 14 kb)
Additional file 22: Figure S7. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils
Creators: name: Yu, Li
name: Tengfei Ma
name: Yuqin Zhang
name: Hu, Ying
name: Yu, Ke
name: Yueyue Chen
name: Haoli Ma
name: Zhao, Jie
Publisher: name: Figshare
Year: 2017
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Heat map of rice candidate genes homologous to some Arabidopsis embryo sac-specific functional genes. (PDF 23Â kb)
Additional file 4: Table S6. of EcoTILLING by sequencing reveals polymorphisms in genes encoding starch synthases that are associated with low glycemic response in rice
Creators: name: Ramadoss Raja
name: Somanath Agasimani
name: Jaiswal, Sarita
name: Venkatesan Thiruvengadam
name: Sabariappan, Robin
name: Ravindra Chibbar
name: Ram, Sundaram
Publisher: name: Figshare
Year: 2017
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Computational Biology

description: Super pool wise sequencing statistics. (DOCX 15 kb)
Additional file 22: Figure S7. of Identification and analysis of the stigma and embryo sac-preferential/specific genes in rice pistils
Creators: name: Yu, Li
name: Tengfei Ma
name: Yuqin Zhang
name: Hu, Ying
name: Yu, Ke
name: Yueyue Chen
name: Haoli Ma
name: Zhao, Jie
Publisher: name: Figshare
Year: 2017
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Heat map of rice candidate genes homologous to some Arabidopsis embryo sac-specific functional genes. (PDF 23Â kb)
Eugenia axillaris Willdenow, Sp. Pl.
Creators: name: Uc Gala, Victor C.
name: Valdemarin, Karinne Sampaio
name: Lucas, Eve
name: Negrão, Raquel
name: Mazine, Fiorella F.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Myrtaceae
Eugenia
Eugenia axillaris

description: 6. Eugenia axillaris (Swartz) Willdenow, Sp. Pl., ed. 4, 2: 960 (1799)
Basionym: Myrtus axillaris Swartz (1788: 68).
EOO: 1,035,176.908 km ². AOO: 120 km ². Evaluation of IUCN: Least Concern.
Eugenia axillaris has a wide distribution in the American continent, occurring from Florida (United States) to Central America, in addition to the Antilles (WCSP 2020). Just 30 records are known for Mexico, where the species is distributed in the Dry and Humid Tropical Forests close to the coast and in the Federal Biosphere Reserves as the “Reserva de la Biosfera de Calakmul”, “Reserva de la Biosfera Montes Azules”, “Reserva de la Biosfera Selva El Ocote” and “Reserva de la Biosfera Sian Ka´an” from sea level to 1,100 m elev. (INE-SEMARNAP 1999a, INESEMARNAP 2000a, CONANP 2001, CONANP 2014). The habitat has a high rate of environmental degradation due to direct anthropogenic impacts on coastal ecosystems (CONABIO 2018). According to recent assessment by BGCI & IUCN (2019b), Eugenia axillaris is currently in the Least Concern (LC) category.
Specimens examined:— MEXICO. Chiapas: Miranda 5968 (MEXU!); Campeche: Martínez 27731 (MEXU!); Guerrero: Noriega 712 (MEXU!); Nayarit: Franco et al. 2873 (MEXU!); Quintana Roo: Cabrera & Cabrera 6444 (MEXU!); Tamaulipas: Martínez 234 (MEXU!); Veracruz: Mata 56 (MEXU!); Yucatán: Cabrera & Cabrera 9726 (MEXU!). Belize: Schipp 825 (F); Guatemala: Contreras 9602 (LL); Honduras: Standley 55052 (F); El Salvador: Calderón 822 (NY).
description: Published as part of Uc Gala, Victor C., Valdemarin, Karinne Sampaio, Lucas, Eve, Negrão, Raquel & Mazine, Fiorella F., 2023, Eugenia (Myrtaceae) from Mexico: checklist, distribution, and conservation assessments, pp. 99-140 in Phytotaxa 583 (2) on pages 104-105, DOI: 10.11646/phytotaxa.583.2.1, http://zenodo.org/record/7609258
Eugenia bajaverapazana Lundell, Wrightia
Creators: name: Uc Gala, Victor C.
name: Valdemarin, Karinne Sampaio
name: Lucas, Eve
name: Negrão, Raquel
name: Mazine, Fiorella F.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Myrtaceae
Eugenia
Eugenia bajaverapazana

description: 7. Eugenia bajaverapazana Lundell, Wrightia 5: 166 (1975)
EOO: 8 km ². AOO: 8 km ². Evaluation of IUCN: Least Concern.
Eugenia bajaverapazana is known for Mexico, but also occurs in Guatemala (WCSP 2020). There is only one record in Mexico, collected in the state of Chiapas in the humid montane forest that is part of the “Montes Azules Biosphere Reserve” and in Guatemala it is known with a collection in the department of Baja Verapaz in the Biotopo El Quetzal conservation area (INE-SEMARNAP 2000a, CECON/USAC 2016). The habitat is considered well preserved, having a low rate of degradation according to CONABIO (2018). In addition, the area is known for its enormous biodiversity (Breedlove 1981, 1986, Castillo-Campos & Navare 1992, Martinez 1994, Levy-Tacher et al. 2006). The estimated extent of occurrence (EOO) and area of occupancy (AOO) fall within the thresholds of Critically Endangered category under the criterion B. However, Eugenia bajaverapazana occurs only in well protected area, and it is assumed that is not under any major threats or continuing decline. Therefore, Eugenia bejaverapazana is classified here as Least Concern (LC), as does not meet all required criteria for a threatened category.
Specimens examined:— MEXICO. Chiapas: Martinez 10216 (MEXU!). Guatemala: Lundell & Contreras 19383 (F).
description: Published as part of Uc Gala, Victor C., Valdemarin, Karinne Sampaio, Lucas, Eve, Negrão, Raquel & Mazine, Fiorella F., 2023, Eugenia (Myrtaceae) from Mexico: checklist, distribution, and conservation assessments, pp. 99-140 in Phytotaxa 583 (2) on page 105, DOI: 10.11646/phytotaxa.583.2.1, http://zenodo.org/record/7609258
Additional file 7: Table S3. of EcoTILLING by sequencing reveals polymorphisms in genes encoding starch synthases that are associated with low glycemic response in rice
Creators: name: Ramadoss Raja
name: Somanath Agasimani
name: Jaiswal, Sarita
name: Venkatesan Thiruvengadam
name: Sabariappan, Robin
name: Ravindra Chibbar
name: Ram, Sundaram
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Computational Biology

description: PCR compositions followed for the amplification of EcoTILLING fragments. (DOCX 14 kb)
Additional file 1: Table S1. of EcoTILLING by sequencing reveals polymorphisms in genes encoding starch synthases that are associated with low glycemic response in rice
Creators: name: Ramadoss Raja
name: Somanath Agasimani
name: Jaiswal, Sarita
name: Venkatesan Thiruvengadam
name: Sabariappan, Robin
name: Ravindra Chibbar
name: Ram, Sundaram
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Details of rice accessions selected for EcoTILLING by sequencing. (DOCX 46 kb)
Eugenia balancanensis Lundell, Phytologia
Creators: name: Uc Gala, Victor C.
name: Valdemarin, Karinne Sampaio
name: Lucas, Eve
name: Negrão, Raquel
name: Mazine, Fiorella F.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Myrtaceae
Eugenia
Eugenia balancanensis

description: 8. * Eugenia balancanensis Lundell, Phytologia 1: 481 (1941)
EOO: 4 km ². AOO: 4 km ². Evaluation of IUCN: Critically Endangered.
Eugenia balancanensis is known only from the type locality in Tabasco, specifically in the municipality of Balancán. The biome of occurrence is the Humid tropical forest. The estimated extent of occurrence (EOO) and area of occupancy (AOO) fall within the thresholds of Critically Endangered category under the criterion B. The region where the specimen was found is 15 km from the conservation area known as the “Flora and Fauna Protection Area Cañón del Usumacinta” (CONANP 2015a). There is only one known location and an inferred continuing decline of habitat due to the high anthropic impact in Balancán, mainly caused by deforestation related to agricultural activities, which has affected about half of the tropical forests area (CONABIO 2018). Therefore, Eugenia balancanensis is classified as Critically Endangered (CR) as it meets the criteria B2ab (iii).
Specimen examined:— MEXICO. Tabasco: Matuda 3361 (MEXU!).
description: Published as part of Uc Gala, Victor C., Valdemarin, Karinne Sampaio, Lucas, Eve, Negrão, Raquel & Mazine, Fiorella F., 2023, Eugenia (Myrtaceae) from Mexico: checklist, distribution, and conservation assessments, pp. 99-140 in Phytotaxa 583 (2) on page 105, DOI: 10.11646/phytotaxa.583.2.1, http://zenodo.org/record/7609258
Neotrombicula (Neotrombicula) turkestanica Kudryashova 1993
Creators: name: Nielsen, David H.
name: Robbins, Richard G.
name: Rueda, Leopoldo M.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Prostigmata
Trombiculidae
Neotrombicula
Neotrombicula turkestanica

description: Neotrombicula (Neotrombicula) turkestanica Kudryashova, 1993a:
PAL
description: Published as part of Nielsen, David H., Robbins, Richard G. & Rueda, Leopoldo M., 2021, Annotated world checklist of the Trombiculidae and Leeuwenhoekiidae (1758 - 2021) (Acari: Trombiculoidea), with notes on nomenclature, taxonomy, and distribution, pp. 1-243 in Zootaxa 4967 (1) on page 170, DOI: 10.11646/zootaxa.4967.1.1, http://zenodo.org/record/4745510
Additional file 5: Table S7. of EcoTILLING by sequencing reveals polymorphisms in genes encoding starch synthases that are associated with low glycemic response in rice
Creators: name: Ramadoss Raja
name: Somanath Agasimani
name: Jaiswal, Sarita
name: Venkatesan Thiruvengadam
name: Sabariappan, Robin
name: Ravindra Chibbar
name: Ram, Sundaram
Publisher: name: Figshare
Year: 2017
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology
subject: Computational Biology

description: Gene wise list of sequence variants discovered through EcoTILLING by sequencing. (DOC 107 kb)
Polyommatus karindus
Creators: name: Khudhur, Farhad Ahmed
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Lycaenidae
Polyommatus
Polyommatus karindus

description: Polyommatus karindus (Riley, 1921)
Examined materials: 1 ♀ in Piramagroon Mountain, 2.5 km North Zêwê Village, Sulaymaniyah (35°45’41”N, 45°14’17”E), Altitude: 1800 m. 15.8.2016 (F.A. Khudhur leg.). 1 ♂ in Swr Kêw Mountain, 1.0 km Northwest Siya Gwêz Village, Penjwen, Sulaymaniyah (35°48’35”N, 45°47’37”E). Altitude: 1500 m. 24.8.2016 (F.A. Khudhur leg.). 1 ♂ in Piramagroon Mountain, 2.5 km North Zêwê Village, Sulaymaniyah (35°45’41”N, 45°14’17”E), Altitude: 1800 m. 10.8.2020 (F.A. Khudhur leg.).
Diagnosis: In male (figs. 1A, 2A & 2B), wing span 36 mm, wing upperside ground color is brilliant blue with azure tinge. Markings are absent on both fore- and hindwings. Narrow, black outer marginal line on forewings and hindwings. Borders of both wings dark grey; hindwings veins terminated with fine black tips. Male wing underside has light grey ground color, only hindwings have basal black spots. Discoidal spots present on both wings. Postdiscal black marking very narrow, longitudinal, and exists only on forewings. Submarginal and marginal lunulae only slightly appear.
In female (fig. 1B), wing span 38 mm, wing upperside has brown ground color with darker veins. Forewings have discoidal black spots. Submarginal markings are dark brown with well-developed orange lunulae on both wings. Female wing underside has slightly darker grey ground color, only hindwings have basal black spots. Discoidal spots present on both wings, those of the forewings are thicker. Postdiscal black marking are thick, slightly curved, and exists only on forewings. Submarginal and marginal lunulae are clearly appearing with orange centers.
description: Published as part of Khudhur, Farhad Ahmed, 2021, New records of two butterflies of the genus Polyommatus Latreille, 1804 (subgenus Agrodiaetus Hübner, 1822) (Lepidoptera: Lycaenidae) from Iraq, pp. 597-600 in Zootaxa 5061 (3) on pages 597-598, DOI: 10.11646/zootaxa.5061.3.13, http://zenodo.org/record/5649778
MOESM17 of Systematic and functional identification of small non-coding RNAs associated with exogenous biofuel stress in cyanobacterium Synechocystis sp. PCC 6803
Creators: name: Guangsheng Pei
name: Sun, Tao
name: Chen, Shuo
name: Chen, Lei
name: Weiwen Zhang
Publisher: name: Figshare
Year: 2017
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Computational Biology

description: Additional file 17: Figure S11. Genome-wide visualization of all sRNA mapping data in pSYSA of Synechocystis. Detailed description is the same as Additional file 2: Figure S1.
Additional file 7: Table S3. of EcoTILLING by sequencing reveals polymorphisms in genes encoding starch synthases that are associated with low glycemic response in rice
Creators: name: Ramadoss Raja
name: Somanath Agasimani
name: Jaiswal, Sarita
name: Venkatesan Thiruvengadam
name: Sabariappan, Robin
name: Ravindra Chibbar
name: Ram, Sundaram
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Computational Biology

description: PCR compositions followed for the amplification of EcoTILLING fragments. (DOCX 14 kb)
Eugenia biflora De Candolle, Prodr.
Creators: name: Uc Gala, Victor C.
name: Valdemarin, Karinne Sampaio
name: Lucas, Eve
name: Negrão, Raquel
name: Mazine, Fiorella F.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Myrtaceae
Eugenia
Eugenia biflora

description: 9. Eugenia biflora (Linnaeus) De Candolle, Prodr. 3: 276 (1828)
Basionym: Myrtus biflora Linnaeus (1759: 1056).
EOO: 109,067.755 km ². AOO: 20 km ². Evaluation of IUCN: Least Concern.
Eugenia biflora is a tree or shrub species that is distributed across Southeast Mexico to Bolivia and the central west of Brazil, as well as the Antilles (Mazine & Souza 2015, WCSP 2020). It is found in a Humid Tropical Forest, a domain that has no habitat loss or any invasion of exotic species, occurring in conservation areas such as the “Reserva de la Biofera la Sepultura”, “Reserva de la Biosfera Montes Azules”, both in the state of Chiapas (INE-SEMARNAP 1999c, INE-SEMARNAP 2000a). Eugenia biflora was recently assessed by BGCI & IUCN (2019c) and is currently in the Least Concern (LC) category.
Specimens examined:— MEXICO. Chiapas: Sinaca & Vidal 25 (MEXU!); Quintana Roo: Téllez y Cabrera 1693 (MEXU!); Yucatán: Pérez L. 294 (MEXU!). Belize: Gentle 7035 (LL); Brazil: Harley et al. 10965 (UB!); Colombia: Callejas et al. 5282 (MO!); Costa Rica: Jiménez 496 (US!); El Salvador: Sandoval & Chinchilla 165 (MO); Honduras: Saunders 419 (MO!); Nicaragua: Rueda et al. 19107 (MO); Panama: Carrasquilla et al. 284 (F).
description: Published as part of Uc Gala, Victor C., Valdemarin, Karinne Sampaio, Lucas, Eve, Negrão, Raquel & Mazine, Fiorella F., 2023, Eugenia (Myrtaceae) from Mexico: checklist, distribution, and conservation assessments, pp. 99-140 in Phytotaxa 583 (2) on page 105, DOI: 10.11646/phytotaxa.583.2.1, http://zenodo.org/record/7609258
Additional file 5: Table S7. of EcoTILLING by sequencing reveals polymorphisms in genes encoding starch synthases that are associated with low glycemic response in rice
Creators: name: Ramadoss Raja
name: Somanath Agasimani
name: Jaiswal, Sarita
name: Venkatesan Thiruvengadam
name: Sabariappan, Robin
name: Ravindra Chibbar
name: Ram, Sundaram
Publisher: name: Figshare
Year: 2017
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Virology
subject: Computational Biology

description: Gene wise list of sequence variants discovered through EcoTILLING by sequencing. (DOC 107 kb)
MOESM16 of Systematic and functional identification of small non-coding RNAs associated with exogenous biofuel stress in cyanobacterium Synechocystis sp. PCC 6803
Creators: name: Guangsheng Pei
name: Sun, Tao
name: Chen, Shuo
name: Chen, Lei
name: Weiwen Zhang
Publisher: name: Figshare
Year: 2017
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Computational Biology

description: Additional file 16: Figure S10. Genome-wide visualization of all sRNA mapping data in pSYSM of Synechocystis. Detailed description is the same as Additional file 2: Figure S1.
Additional file 1: Table S1. of EcoTILLING by sequencing reveals polymorphisms in genes encoding starch synthases that are associated with low glycemic response in rice
Creators: name: Ramadoss Raja
name: Somanath Agasimani
name: Jaiswal, Sarita
name: Venkatesan Thiruvengadam
name: Sabariappan, Robin
name: Ravindra Chibbar
name: Ram, Sundaram
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Details of rice accessions selected for EcoTILLING by sequencing. (DOCX 46 kb)
Eugenia breedlovei Barrie, Novon
Creators: name: Uc Gala, Victor C.
name: Valdemarin, Karinne Sampaio
name: Lucas, Eve
name: Negrão, Raquel
name: Mazine, Fiorella F.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Myrtaceae
Eugenia
Eugenia breedlovei

description: 10. * Eugenia breedlovei Barrie, Novon 15: 6 (2005)
EOO: 354,456 km ². AOO: 12 km ². Evaluation of IUCN: Least Concern.
Eugenia breedlovei is endemic to Mexico and known from only seven collections made in the state of Chiapas. The habitat is in a good state of conservation, mainly placed within a protected area very important for the biodiversity of Mexico, “Reserva de la Biosfera Selva el Ocote” (CONANP 2001, Rzedowski 1994, 1978, Ochoa-Gaona, 1996, Miranda 1952, Breedlove 1981, Matuda 1950). The estimated extent of occurrence (EOO) exceeds the threshold for a threatened category under criterion B, whilst the estimated area of occupancy (AOO) falls between Critically Endangered and Endangered categories. However, Eugenia breedlovei occurs within several protected areas and its area of occupancy (AOO) is considered underestimated due to its habitat specificity in the poorly surveyed Humid Montane Forest. As the last known collection was made 10 years ago, the low number of existing records is considered related to scarce collection efforts. Therefore, Eugenia breedlovei is classified here as Least Concern (LC).
Specimen examined:— MEXICO. Chiapas: Miranda 6128 (MEXU!).
description: Published as part of Uc Gala, Victor C., Valdemarin, Karinne Sampaio, Lucas, Eve, Negrão, Raquel & Mazine, Fiorella F., 2023, Eugenia (Myrtaceae) from Mexico: checklist, distribution, and conservation assessments, pp. 99-140 in Phytotaxa 583 (2) on page 106, DOI: 10.11646/phytotaxa.583.2.1, http://zenodo.org/record/7609258
Polyommatus peilei Bethune-Baker 1921
Creators: name: Khudhur, Farhad Ahmed
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Lepidoptera
Lycaenidae
Polyommatus
Polyommatus peilei

description: Polyommatus peilei Bethune-Baker, 1921
Examined materials: 1 ♀ in Piramagroon Mountain, 2.5 km North Zêwê Village, Sulaymaniyah (35°45’41”N, 45°14’17”E), Altitude: 1800 m. 29.7.2016 (F.A. Khudhur leg.). 1 in ♀ Piramagroon Mountain, 2.5 km North Zêwê Village, Sulaymaniyah (35°45’41”N, 45°14’17”E), Altitude: 1800 m. 10.8.2020 (F.A. Khudhur leg.).
Diagnosis: In female (figs. 1C, 1D, 2C & 2D), wing span 30 mm, wing upperside has brown ground color with darker veins. The discoidal black spot of forewings is slightly appearing. Submarginal markings are dark brown with well-developed orange lunulae on hind wings. Female wing underside has greyish orange ground color; only hindwings have basal black spots. Discoidal spots present on both wings, those of the forewings are thicker except the first spot which is smaller and slightly far from the outer margin. Postdiscal black marking thick, slightly curved, and exists only on forewings. Submarginal and marginal lunulae only slightly appear with orange marking.
description: Published as part of Khudhur, Farhad Ahmed, 2021, New records of two butterflies of the genus Polyommatus Latreille, 1804 (subgenus Agrodiaetus Hübner, 1822) (Lepidoptera: Lycaenidae) from Iraq, pp. 597-600 in Zootaxa 5061 (3) on pages 598-599, DOI: 10.11646/zootaxa.5061.3.13, http://zenodo.org/record/5649778
Eugenia bumelioides Standley, Publ. Carnegie Inst. Wash.
Creators: name: Uc Gala, Victor C.
name: Valdemarin, Karinne Sampaio
name: Lucas, Eve
name: Negrão, Raquel
name: Mazine, Fiorella F.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Myrtales
Myrtaceae
Eugenia
Eugenia bumelioides

description: 11. Eugenia bumelioides Standley, Publ. Carnegie Inst. Wash. 461: 75 (1935)
EOO: 162,256.645 km ². AOO: 56 km ². Evaluation of IUCN: Least Concern.
Eugenia bumelioides is endemic to the Mesoamerican region, its distribution comprises southeastern Mexico (Chiapas, Tabasco, and Yucatán) and border countries such as Guatemala and Belize (WCSP 2020). With only 28 collection records for the region, occurring mainly in the Humid Tropical Forests of the countries of Mexico, Guatemala, and Belize. The estimated extent of occurrence (EOO) exceeds the thresholds for a threatened category under the criterion B. Its area of occupancy (AOO) would likely exceed the thresholds of any threatened category when the remaining habitat available is taken in account, as this species occurs within protected areas. The conserved forests where the species was collected, mainly in Chiapas Mexico, are protected by the Selva el Ocote Biosphere Reserve, one of the most important tropical forest reserves in Mexico. In this way, Eugenia bumelioides is classified here as Least Concern (LC) according to the criteria of IUCN (2012).
Specimens examined:— MEXICO. Chiapas: S. Ochoa-Gaoana 30131 (ECO-SCH); Tabasco: Matuda 3563 (MEXU!); Yucatán: May & Sim 833 (CICY!). Belize: Schipp 1270 (MICH); Guatemala: Lundell & Contreras 20100 (LL).
description: Published as part of Uc Gala, Victor C., Valdemarin, Karinne Sampaio, Lucas, Eve, Negrão, Raquel & Mazine, Fiorella F., 2023, Eugenia (Myrtaceae) from Mexico: checklist, distribution, and conservation assessments, pp. 99-140 in Phytotaxa 583 (2) on page 106, DOI: 10.11646/phytotaxa.583.2.1, http://zenodo.org/record/7609258
MOESM2 of Predictive performance of genomic selection methods for carcass traits in Hanwoo beef cattle: impacts of the genetic architecture
Creators: name: Mehrban, Hossein
name: Lee, Deuk
name: Moradi, Mohammad
name: IlCho, Chung
name: Naserkheil, Masoumeh
name: IbĂĄĂąez-Escriche, Noelia
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Additional file 2: Table S1. Mean square error (SE) of genomic prediction for four carcass traits in Hanwoo beef cattle. This table provides the mean square errors of GBLUP, BayesL and BayesC genomic prediction for backfat thickness (BT), carcass weight (CW), eye muscle area (EMA), and marbling score (MS) traits.
MOESM15 of Systematic and functional identification of small non-coding RNAs associated with exogenous biofuel stress in cyanobacterium Synechocystis sp. PCC 6803
Creators: name: Guangsheng Pei
name: Sun, Tao
name: Chen, Shuo
name: Chen, Lei
name: Weiwen Zhang
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biophysics
subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Computational Biology

description: Additional file 15: Figure S9. Flow-cytometric analysis of WT, pJA2-nc33â  , pJA2-nc65+, pJA2-nc85+ and pJA2-nc117+ strains. Forward scatter (FSC) is related to cell size and the FL3 channel with the 670/LP filter, which is related to chlorophyll fluorescence. The y-axis was normalized according to pixel count. (A) FSC histogram of cells under BG11; (B) FL3 histogram of cells under BG11; (C) FL3 histogram of cells under BG11 with 2.0% (v/v) ethanol; (D) FL3 histogram of cells under BG11 with 0.25% (v/v) butanol.
MOESM2 of Whole-genome sequence-based genomic prediction in laying chickens with different genomic relationship matrices to account for genetic architecture
Creators: name: Guiyan Ni
name: Cavero, David
name: Fangmann, Anna
name: Erbe, Malena
name: Simianer, Henner
Publisher: name: Figshare
Year: 2017
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences

description: Additional file 2: Figure S1. Imputation accuracy (Rsq of Minimac3) in each minor allele frequency (MAF) interval.
MOESM2 of Predictive performance of genomic selection methods for carcass traits in Hanwoo beef cattle: impacts of the genetic architecture
Creators: name: Mehrban, Hossein
name: Lee, Deuk
name: Moradi, Mohammad
name: IlCho, Chung
name: Naserkheil, Masoumeh
name: IbĂĄĂąez-Escriche, Noelia
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Additional file 2: Table S1. Mean square error (SE) of genomic prediction for four carcass traits in Hanwoo beef cattle. This table provides the mean square errors of GBLUP, BayesL and BayesC genomic prediction for backfat thickness (BT), carcass weight (CW), eye muscle area (EMA), and marbling score (MS) traits.