cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Supplementary Tables and Appendices: Table S1. Specimens number, locality data and genbank numbers for all samples included in genetic analyses; Table S2. Summary of results from dating analyses. Table S3; Summary of morphological data for velvet geckos in the genus Oedura from the Australian Arid Zone; Appendix S1. Summary specimens included in morphological analyses and comparisons from Young relicts and old relicts: a novel palaeoendemic vertebrate from The Australian Central Uplands
Creators: name: Oliver, Paul M.
name: McDonald, Peter J.
Publisher: name: The Royal Society
Year: 2016
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Ecology
subject: 60301 Animal Systematics and Taxonomy
subject: 60310 Plant Systematics and Taxonomy

description: Climatic change, and in particular aridification, has played a dominant role in shaping Southern Hemisphere biotas since the Mid-Neogene. In Australia, ancient and geologically stable ranges within the vast arid zone have functioned as refugia for populations of mesic taxa extirpated from surrounding areas, yet the extent to which relicts may be linked to major aridification events before or after the Pliocene has not been examined in detail. Here, we use molecular phylogenetic and morphological data to show that isolated populations of saxicoline geckos in the genus Oedura from the Australian Central Uplands, formerly confounded as a single taxon, actually comprise two divergent species with contrasting histories of isolation. The recently resurrected Oedura cincta has close relatives occurring elsewhere in the Australian arid biomes with estimated divergence dates concentrated in the Early Pliocene. A new taxon (described herein) diverged from all extant Oedura much earlier, well before the end of the Miocene. A review of data for Central Uplands endemic vertebrates shows that for most (including Oedura cincta), geneflow with other parts of Australia probably occurred until at least the very Late Miocene or Pliocene. There are however a small number of palaeoendemic taxa—often ecologically specialized forms—that show evidence of having persisted since earlier intensification of aridity in the Late Miocene.
Topological effects in fermion condensate induced by cosmic string and compactification on AdS bulk
Creators: name: Bellucci, S.
name: Santos, W. Oliveira dos
name: de Mello, E. R. Bezerra
name: Saharian, A. A.
Publisher: name: arXiv
Year: 2021
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We investigate the fermion condensate (FC) for a massive spinor field on background of the 5-dimensional locally anti-de Sitter (AdS) spacetime with a compact dimension and in the presence of a cosmic string carrying a magnetic flux. The FC is decomposed into two contributions. The first one corresponds to the geometry without compactification and the second one is induced by the compactification. Depending on the values of the parameters, the total FC can be either positive or negative. As a limiting case, the expression for the FC on locally Minkowski spacetime is derived. It vanishes for a massless fermion field and the nonzero FC on the AdS bulk in the massless case is an effect induced by gravitation. This shows that the gravitational field may essentially influence the parameters space for phase transitions. For a massive field the FC diverges on the string as the inverse cube of the proper distance from the string. In the case of a massless field, depending on the magnetic flux along the string and planar angle deficit, the limiting value of the FC on the string can be either finite or infinite. At large distances, the decay of the FC as a function of the distance from the string is power law for both cases of massive and massless fields. For a cosmic string on the Minkowski bulk and for a massive field the decay is exponential. The topological part in the FC vanishes on the AdS boundary. We show that the FCs coincide for the fields realizing two inequivalent irreducible representations of the Clifford algebra. In the special case of the zero planar angle deficit, the results presented in this paper describe Aharonov-Bohm-type effects induced by magnetic fluxes in curved spacetime.
description: 28 pages, 6 figures. Version accepted for publication in Symmetry
Practical Verification of Quantum Properties in Quantum Approximate Optimization Runs
Creators: name: Alam, M. Sohaib
name: Wudarski, Filip A.
name: Reagor, Matthew J.
name: Sud, James
name: Grabbe, Shon
name: Wang, Zhihui
name: Hodson, Mark
name: Lott, P. Aaron
name: Rieffel, Eleanor G.
name: Venturelli, Davide
Publisher: name: arXiv
Year: 2021
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: In order to assess whether quantum resources can provide an advantage over classical computation, it is necessary to characterize and benchmark the non-classical properties of quantum algorithms in a practical manner. In this paper, we show that using measurements in no more than 3 out of the possible $3^N$ bases, one can not only reconstruct the single-qubit reduced density matrices and measure the ability to create coherent superpositions, but also possibly verify entanglement across all $N$ qubits participating in the algorithm. We introduce a family of generalized Bell-type observables for which we establish an upper bound to the expectation values in fully separable states by proving a generalization of the Cauchy-Schwarz inequality, which may serve of independent interest. We demonstrate that a subset of such observables can serve as entanglement witnesses for QAOA-MaxCut states, and further argue that they are especially well tailored for this purpose by defining and computing an entanglement potency metric on witnesses. A subset of these observables also certify, in a weaker sense, the entanglement in GHZ states, which share the $\mathbb{Z}_2$ symmetry of QAOA-MaxCut. The construction of such witnesses follows directly from the cost Hamiltonian to be optimized, and not through the standard technique of using the projector of the state being certified. It may thus provide insights to construct similar witnesses for other variational algorithms prevalent in the NISQ era. We demonstrate our ideas with proof-of-concept experiments on the Rigetti Aspen-9 chip for ansatze containing up to 24 qubits.
Development of Convolutional Neural Networks for an Electron-Tracking Compton Camera
Creators: name: Ikeda, Tomonori
name: Takada, Atsushi
name: Abe, Mitsuru
name: Yoshikawa, Kei
name: Tsuda, Masaya
name: Ogio, Shingo
name: Sonoda, Shinya
name: Mizumura, Yoshitaka
name: Yoshida, Yura
name: Tanimori, Toru
Publisher: name: arXiv
Year: 2021
Subjects: subject: High Energy Physics - Experiment (hep-ex)
subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Physical sciences

description: Electron-tracking Compton camera, which is a complete Compton camera with tracking Compton scattering electron by a gas micro time projection chamber, is expected to open up MeV gamma-ray astronomy. The technical challenge for achieving several degrees of the point spread function is the precise determination of the electron-recoil direction and the scattering position from track images. We attempted to reconstruct these parameters using convolutional neural networks. Two network models were designed to predict the recoil direction and the scattering position. These models marked 41$~$degrees of the angular resolution and 2.1$~$mm of the position resolution for 75$~$keV electron simulation data in Argon-based gas at 2$~$atm pressure. In addition, the point spread function of ETCC was improved to 15$~$degrees from 22$~$degrees for experimental data of 662$~$keV gamma-ray source. These performances greatly surpassed that using the traditional analysis.
The Dynamics of Faculty Hiring Networks
Creators: name: Lee, Eun
name: Clauset, Aaron
name: Larremore, Daniel B.
Publisher: name: arXiv
Year: 2021
Subjects: subject: Physics and Society (physics.soc-ph)
subject: Computers and Society (cs.CY)
subject: Social and Information Networks (cs.SI)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: Faculty hiring networks-who hires whose graduates as faculty-exhibit steep hierarchies, which can reinforce both social and epistemic inequalities in academia. Understanding the mechanisms driving these patterns would inform efforts to diversify the academy and shed new light on the role of hiring in shaping which scientific discoveries are made. Here, we investigate the degree to which structural mechanisms can explain hierarchy and other network characteristics observed in empirical faculty hiring networks. We study a family of adaptive rewiring network models, which reinforce institutional prestige within the hierarchy in five distinct ways. Each mechanism determines the probability that a new hire comes from a particular institution according to that institution's prestige score, which is inferred from the hiring network's existing structure. We find that structural inequalities and centrality patterns in real hiring networks are best reproduced by a mechanism of global placement power, in which a new hire is drawn from a particular institution in proportion to the number of previously drawn hires anywhere. On the other hand, network measures of biased visibility are better recapitulated by a mechanism of local placement power, in which a new hire is drawn from a particular institution in proportion to the number of its previous hires already present at the hiring institution. These contrasting results suggest that the underlying structural mechanism reinforcing hierarchies in faculty hiring networks is a mixture of global and local preference for institutional prestige. Under these dynamics, we show that each institution's position in the hierarchy is remarkably stable, due to a dynamic competition that overwhelmingly favors more prestigious institutions.
Supplementary Figure S1 from Muskuloskeletal modelling under an evolutionary perspective: deciphering the role of single muscle regions in closely related insects
Creators: name: David, Sina
name: Funken, Johannes
name: Potthast, Wolfgang
name: Blanke, Alexander
Publisher: name: The Royal Society
Year: 2016
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 110601 Biomechanics
subject: FOS: Health sciences

description: Raw bite curves for all measured species. As mentioned in the main text, this raw data was subsequently filtered and selected. Please refer to the material and methods section for further information on bite selection.
Spectroscopic Effects of Velocity-Dependent Casimir-Polder Interactions Induced by Parallel Plates
Creators: name: Durnin, Joseph
name: Klatt, Juliane
name: Bennett, Robert
name: Buhmann, Stefan Yoshi
Publisher: name: arXiv
Year: 2021
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Casimir-Polder interactions cause energy and momentum exchange between microscopic and macroscopic bodies, a process mediated by quantum fluctuations in the coupled matter-electromagnetic field system. The dynamics of such effects are yet to be experimentally investigated due to the dominance of static effects at currently attainable atomic velocities. However, Y. Guo and Z. Jacob [\textit{Opt. Express}, 22:26193-26202, 2014] have proposed a non-static two-plate set-up where quantum fluctuation mediated effects have a strong velocity-dependent resonance, leading to a giant friction force on the plates. Here a more easily realisable set-up, a moving atom between two stationary plates, is analysed within a QED framework to establish the spectroscopic Casimir-Polder effects on the atom, and their velocity dependence. While no large velocity-dependent enhancement is found, expressions for the plate-induced spectroscopic effects on the atom were found, and further shown to be equivalent to the Doppler-shifted static result within certain velocity constraints. A numerical analysis investigates the behaviour of this system for the well studied case of the $6D_{3/2}\rightarrow 7P_{1/2}$ transition in $^{133}$Cs interacting with sapphire plates.
description: 7 pages, 4 figures
Die Entwicklung und Prognose von Lebenserwerbseinkommen in Deutschland
Creators: name: Bönke, Timm
name: Glaubitz, Rick
name: Göbler, Konstantin
name: Harnack, Astrid
name: Pape, Astrid
name: Wetter, Miriam
Publisher: name: Freie Universität Berlin
Year: 2020
Subjects: subject: Lebenserwerbseinkommen
subject: Dynamische Mikrosimulation
subject: Gender Lifetime Earnings Gap
subject: 300 Sozialwissenschaften::330 Wirtschaft::330 Wirtschaft
subject: 300 Sozialwissenschaften::330 Wirtschaft::336 Öffentliche Finanzen

description: Ungleichheitsstudien basieren in der Regel auf Daten zu Jahres- oder Monatseinkommen, um die Verteilung ökonomischer Ressourcen zu einem bestimmten Zeitpunkt im Querschnitt einer Bevölkerung zu bestimmen. Analysen auf Jahres- oder Monatsquerschnitten können jedoch ein unvollständiges Bild liefern, da sie oft nur erwerbstätige Individuen betrachten und sich die individuellen Positionen in der Einkommensverteilung über das Erwerbsleben einer Person ändern. Ein umfassenderes Bild bieten Lebenserwerbseinkommen. Die Analyse von Lebenserwerbseinkommen setzen Informationen über vollständige Erwerbsbiografien voraus. Informationen, die wenn überhaupt nur für spezielle Bevölkerungsgruppen in Form von administrativen Daten der Sozialversicherung vorliegen. Um eine geeignete Datengrundlage zur Analyse von Lebenserwerbseinkommen der gesamten Bevölkerung zu schaffen, nutzen wir eine dynamische Mikrosimulation auf Basis des Sozioökonomischen Panels um vollständige Erwerbsbiografien für die Kohorten 1964 bis 1985 bis ins Jahr 2045 zu konstruieren. Wir können zeigen, dass sich der Unterschied zwischen den Lebenserwerbseinkommen Gering- und Hochqualifizierter Männer in Preisen von 2015 auf über eine Million Euro beläuft, Geringqualifizierte verdiene im Lauf ihres Lebens nur knapp 40 Prozent des Erwerbseinkommens eines Hochqualifizierten. Gleichzeitig finden wir, dass zwischen 1981 und 1985 geborene Frauen im Durchschnitt über den Lebensverlauf hinweg nur rund 55 Prozent der Erwerbseinkommen der Männer verdienen.
title: 02_1385
Creators: name: Wesley Baldwin, John
name: Baldwin, John W.
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2018
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: L'ensemble de ces notes ont été crée par John Baldwin lors d'une de ses premières périodes de résidence à Paris. Ces documents comprennent tous les magistri qu’il avait pu rencontrer dans ses sources. Aux XIIème et XIIIème siècles, les universités n'existant pas encore, le titre de magister s'il évoque certainement une compétence n'est pas rattaché de façon systématique au passage par les écoles. De surcroît, les magistris sont le plus souvent désignés par leur seul prénom. La lecture de ces données est donc difficile et suppose un long travail pour tenter d'identifier un individu auquel on pourrait rattacher plusieurs mentions. John Baldwin avait donc renoncé à utiliser ces données pour donner un prolongement à sa magnifique étude sur les gradués d'université et leur emploi par les Capétiens et les Plantagenêts. Néanmoins, il a conservé ces données et elles sont potentiellement très utile dans le cadre de Studium, comme le sont toutes les mentions dans les volumes des Fasti Ecclesiae Gallicanae de chanoines portant ce titre de magister sans autres précisions. L'ampleur des dépouillements rend ces données très utiles et nous devons une grande reconnaissance à John Baldwin pour avoir pris la peine de faire photocopier ses fiches et de nous les avoir transmises amicalement.
Les données ainsi que les images des fiches sont accessibles sur le site Internet à l'adresse suivante : http://studium-baldwin.lamop.fr/.
Les transcriptions des fiches ont été effectuées par des étudiants de Paris 1 Panthéon - Sorbonne mais elles n'ont pas été corrigées par la suite.
description: Relation: https://lamop.hypotheses.org/
Amtliche Mitteilungen der Technischen Universität Dortmund Nr. 7/2020
Creators: name: (:Unkn) Unknown
Publisher: name: Technische Universität Dortmund
Year: 2020
Subjects: subject: 080

description: Prüfungsordnung für die Bachelorstudiengänge Bio- und Chemieingenieurwesen der Fakultät Bio- und Chemieingenieurwesen an der Technischen Universität Dortmund vom 16. März 2020
description: Prüfungsordnung für die Masterstudiengänge Bio- und Chemieingenieurwesen der Fakultät Bio- und Chemieingenieurwesen an der Technischen Universität Dortmund vom 16. März 2020
description: Zugangsordnung für die Masterstudiengänge Bio- und Chemieingenieurwesen der Fakultät Bio- und Chemieingenieurwesen an der Technischen Universität Dortmund vom 16. März 2020
description: Amtliche Mitteilungen der Technischen Universität Dortmund;2020, 7
Sound Verification of Security Protocols: From Design to Interoperable Implementations (extended version)
Creators: name: Arquint, Linard
name: Wolf, Felix
name: Lallemand, Joseph
name: Sasse, Ralf
name: Sprenger, Christoph
name: Wiesner, Sven N.
name: Basin, David
name: Müller, Peter
Publisher: name: ETH Zurich
Year: 2022
Subjects: Cryptography and Security (cs.CR)
Programming Languages (cs.PL)
FOS: Computer and information sciences

description: We provide a framework consisting of tools and metatheorems for the end-to-end verification of security protocols, which bridges the gap between automated protocol verification and code-level proofs. We automatically translate a Tamarin protocol model into a set of I/O specifications expressed in separation logic. Each such specification describes a protocol role's intended I/O behavior against which the role's implementation is then verified. Our soundness result guarantees that the verified implementation inherits all security (trace) properties proved for the Tamarin model. Our framework thus enables us to leverage the substantial body of prior verification work in Tamarin to verify new and existing implementations. The possibility to use any separation logic code verifier provides flexibility regarding the target language. To validate our approach and show that it scales to real-world protocols, we verify a substantial part of the official Go implementation of the WireGuard VPN key exchange protocol.
description: arXiv
A Generic Methodology for the Modular Verification of Security Protocol Implementations
Creators: name: Arquint, Linard
name: Schwerhoff, Malte
name: Mehta, Vaibhav
name: Müller, Peter
Publisher: name: ETH Zurich
Year: 2022
Subjects: Cryptography and Security (cs.CR)
Programming Languages (cs.PL)
FOS: Computer and information sciences

description: Security protocols are essential building blocks of modern IT systems. Subtle flaws in their design or implementation may compromise the security of entire systems. It is, thus, important to prove the absence of such flaws through formal verification. Much existing work focuses on the verification of protocol *models*, which is not sufficient to show that their *implementations* are actually secure. Verification techniques for protocol implementations (e.g., via code generation or model extraction) typically impose severe restrictions on the used programming language and code design, which may lead to sub-optimal implementations. In this paper, we present a methodology for the modular verification of strong security properties directly on the level of the protocol implementations. Our methodology leverages state-of-the-art verification logics and tools to support a wide range of implementations and programming languages. We demonstrate its effectiveness by verifying memory safety and security of Go implementations of the Needham-Schroeder-Lowe and WireGuard protocols, including forward secrecy and injective agreement for WireGuard. We also show that our methodology is agnostic to a particular language or program verifier with a prototype implementation for C.
description: arXiv
Isomorphic unordered labeled trees up to substitution ciphering
Creators: name: Ingels, Florian
name: Azaïs, Romain
Publisher: name: arXiv
Year: 2021
Subjects: subject: Discrete Mathematics (cs.DM)
subject: Data Structures and Algorithms (cs.DS)
subject: Combinatorics (math.CO)
subject: FOS: Computer and information sciences
subject: FOS: Mathematics

description: Given two messages - as linear sequences of letters, it is immediate to determine whether one can be transformed into the other by simple substitution cipher of the letters. On the other hand, if the letters are carried as labels on nodes of topologically isomorphic unordered trees, determining if a substitution exists is referred to as marked tree isomorphism problem in the literature and has been show to be as hard as graph isomorphism. While the left-to-right direction provides the cipher of letters in the case of linear messages, if the messages are carried by unordered trees, the cipher is given by a tree isomorphism. The number of isomorphisms between two trees is roughly exponential in the size of the trees, which makes the problem of finding a cipher difficult by exhaustive search. This paper presents a method that aims to break the combinatorics of the isomorphisms search space. We show that in a linear time (in the size of the trees), we reduce the cardinality of this space by an exponential factor on average.
Multi-location trials and population-based genotyping reveal high diversity and adaptation to breeding environments in a large collection of red clover
Creators: name: Nay, Michelle M.
name: Grieder, Christoph
name: Frey, Lea A.
name: Amdahl, Helga
name: Radovic, Jasmina
name: Jaluvka, Libor
name: Palme, Anna
name: Skot, Leif
name: Ruttink, Tom
name: Kölliker, Roland
Publisher: name: ETH Zurich
Year: 2022
Subjects: red clover
plant breeding
forage
legume
adaptation

description: Red clover (Trifolium pratense L.) is an outcrossing forage legume that has adapted to a wide range of climatic and growing conditions across Europe. Red clover is valued for its high yield potential and forage quality. The high amount of genetic diversity present in red clover provides an invaluable, but often poorly characterized resource to improve key traits such as yield, quality, and resistance to biotic and abiotic stresses. In this study, we examined the genetic and phenotypic diversity within a diverse set of 395 diploid red clover accessions via genome wide allele frequency fingerprinting and multi-location field trials across Europe. We found that the genetic structure of accessions mostly reflected their geographic origin and only few cases were detected, where breeders integrated foreign genetic resources into their local breeding pools. Phenotypic performance of accessions in the multi-location field trials revealed a very high accession x location interaction. Thereby, breeding material and cultivars generally performed well at the location where they were developed. Local adaptation was especially prominent in Nordic red clover accessions that showed a distinct adaptation to the growing conditions and cutting regime of the North. Our results confirmed that red clover cultivars were bred from regional ecotypes and show a narrow adaptation to regional conditions. Our study can serve as a valuable basis for identifying interesting material that express the desired characteristics and contribute to the adaptation of red clover to future climatic conditions.
description: bioRxiv
Milli-Magnetic Monopole Dark Matter and the Survival of Galactic Magnetic Fields
Creators: name: Graesser, Michael L.
name: Shoemaker, Ian M.
name: Arellano, Natalia Tapia
Publisher: name: arXiv
Year: 2021
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: Dark sectors with Abelian gauge symmetries can interact with ordinary matter via kinetic mixing. In such scenarios, magnetic monopoles of a broken dark $U(1)$ will appear in our sector as confined milli-magnetically charged objects under ordinary electromagnetism. Halo ellipticity constraints are shown to significantly bound the strength of dark magnetic Coulomb monopole interactions. The bound monopole ground state, which in vacuum is stable and has no magnetic charge or moment, is shown to become quantum mechanically unstable in the presence of an external, ordinary magnetic field. If these states contribute sizably to the local dark matter density, they can extract significant energy from the galactic magnetic field if their decay occurs on a galactic timescale or less. We revise and extend this "Parker Bound" on galactic magnetic energy loss to milli-monopoles which leads to the strongest existing constraints on these states, satisfying our halo ellipticity bounds, over a wide range of monopole masses.
description: 33 pages + appendices, 4 figures
A major QTL for stem rust resistance in Italian ryegrass explains 53% of the phenotypic variance
Creators: name: Kiesbauer, Jenny
name: Grieder, Christoph
name: Schlatter, Linda
name: Chen, Yutang
name: Studer, Bruno
name: Kölliker, Roland
Publisher: name: ETH Zurich
Year: 2022

description: Bulletin SGPW/SSA, 32
description: Lösungen für eine zukunftsorientierte Proteinproduktion
RSOB-16-0084_Supplementary material_corrected from Streptococcal group B integrative and mobilizable element IME-rpsI encodes a functional relaxase involved in its transfer
Creators: name: Lorenzo-Diaz, Fabian
name: Fernández-Lopez, Cris
name: Pierre-Emmanuel Douarre
name: Baez-Ortega, Adrian
name: Flores, Carlos
name: Glaser, Philippe
name: Espinosa, Manuel
Publisher: name: The Royal Society
Year: 2016
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: 60408 Genomics

description: Streptococcus agalactiae or Group B Streptococcus (GBS) are opportunistic bacteria that can cause lethal sepsis in children and immuno-compromised patients. Their genome is a reservoir of mobile genetic elements (MGEs) that can be horizontally transferred. Among them, integrative and conjugative elements (ICEs), and the smaller integrative and mobilizable elements (IMEs), primarily reside in the bacterial chromosome, yet have the ability to be transferred between cells by conjugation. ICEs and IMEs are therefore a source of genetic variability that participates in the spread of antibiotic resistances. Although IMEs seem to be the most prevalent class of elements transferable by conjugation, they are poorly known. Here, we have studied a GBS-IME, termed IME-rpsl, which is widely distributed in GBS despite not carrying any apparent virulence trait. Analyses of 240 whole genomes showed that IME-rpsl is present in approximately 47% of the genomes, has a roughly constant size (approx. 9 kb) and is always integrated at a single location, the 3′-end of the gene encoding the ribosomal protein S9 (rpsI). Based on their genetic variation, several IME-rpsI types were defined (A–J) and classified in clonal complexes (CCs). CC1 was the most populated by IME-rpsI (more than 95%), mostly of type-A (71%). One CC1 strain (S. agalactiae HRC) was deep-sequenced to understand the rationale underlying type-A IME-rpsI enrichment in GBS. Thirteen open reading frames were identified, one of them encoding a protein (MobSag) belonging to the broadly distributed family of relaxases MOBV1. Protein MobSag was purified and, by a newly developed method, shown to cleave DNA at a specific dinucleotide. The S. agalactiae HRC-IME-rpsl is able to excise from the chromosome, as shown by the presence of circular intermediates, and it harbours a fully functional mobilization module. Further, the mobSag gene encoded by this mobile element is able to promote plasmid transfer among pneumococcal strains, suggesting that MobSag facilitates the spread of IME-rpsI and that this spread would explain the presence of the same IME-rpsI type in GBS strains belonging to different CCs.
Associated charmonium-bottomonium production in a single boson $e^+e^-$ annihilation
Creators: name: Belov, I. N.
name: Berezhnoy, A. V.
name: Leshchenko, E. A.
Publisher: name: arXiv
Year: 2021
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The production cross sections of $J/ψ~η_b$, $Υ\;η_c$ pairs in a single boson $e^+e^-$ annihilation have been studied in a wide range of energies, which will be achieved at future $e^+e^-$ colliders. The main color singlet contributions to the production processes are taken into account, including the one loop QCD contribution.
description: Several plots are changed. The bibliography info: see the correct references in the arXiv version
title: 03_0013
Creators: name: Wesley Baldwin, John
name: Baldwin, John W.
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2018
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: L'ensemble de ces notes ont été crée par John Baldwin lors d'une de ses premières périodes de résidence à Paris. Ces documents comprennent tous les magistri qu’il avait pu rencontrer dans ses sources. Aux XIIème et XIIIème siècles, les universités n'existant pas encore, le titre de magister s'il évoque certainement une compétence n'est pas rattaché de façon systématique au passage par les écoles. De surcroît, les magistris sont le plus souvent désignés par leur seul prénom. La lecture de ces données est donc difficile et suppose un long travail pour tenter d'identifier un individu auquel on pourrait rattacher plusieurs mentions. John Baldwin avait donc renoncé à utiliser ces données pour donner un prolongement à sa magnifique étude sur les gradués d'université et leur emploi par les Capétiens et les Plantagenêts. Néanmoins, il a conservé ces données et elles sont potentiellement très utile dans le cadre de Studium, comme le sont toutes les mentions dans les volumes des Fasti Ecclesiae Gallicanae de chanoines portant ce titre de magister sans autres précisions. L'ampleur des dépouillements rend ces données très utiles et nous devons une grande reconnaissance à John Baldwin pour avoir pris la peine de faire photocopier ses fiches et de nous les avoir transmises amicalement.
Les données ainsi que les images des fiches sont accessibles sur le site Internet à l'adresse suivante : http://studium-baldwin.lamop.fr/.
Les transcriptions des fiches ont été effectuées par des étudiants de Paris 1 Panthéon - Sorbonne mais elles n'ont pas été corrigées par la suite.
description: Relation: https://lamop.hypotheses.org/
title:  Il diritto delle persone con disabilità a una vita indipendente e all’inclusione sociale
Creators: name: Palmisano, Giuseppe
Publisher: name: RomaTrE-Press
Year: 2019

description: Lo scritto esamina origine, contenuti, finalità e implicazioni del diritto a una vita indipendente e all’inclusione sociale, sancito dalla Convenzione delle Nazioni Unite sui diritti delle persone con disabilità (art. 19), ponendo soprattutto in luce l’originalità e la peculiarità del diritto, inteso quale oggetto di una norma internazionale pattizia a tutela di un diritto “sociale” della persona.
Oltre al significato essenziale del diritto a una vita indipendente, vengono approfondite le misure la cui adozione risulta necessaria alla piena attuazione del diritto da parte dello Stato, riguardanti la libera scelta della residenza e la progressiva “deistituzionalizzazione”, i servizi di sostegno personalizzati, nonché l’accessibilità dei servizi sociali generali. Vengono altresì evidenziati i problemi principali che si riscontrano nell’attuazione di tali misure, alla luce della prima prassi applicativa del Comitato delle Nazioni Unite per i diritti delle persone con disabilità.
description: Diritto internazionale e valori umanitari
title: Raising your voice
Creators: name: Pennartz, Victoria Helena
Year: 2024

description: In dieser Masterarbeit wird der Zusammenhang zwischen sozialen Bewegungen und Musik untersucht, welche als nachhaltiges soziales und kulturelles Phänomen, sowie als friedliches Mittel zum Protest und Empowerment, als auch Förderungsmittel von sozialem Wandel angesehen wird. Die folgende Arbeit ist eine Fallstudie, die sich mit zwei bedeutenden Schwarzen Künstlerinnen befasst, welche im Kontext von zwei der wichtigsten sozialen Bewegungen des 20. Jahrhunderts ihre Stimmen erhoben: Zum einen die US-Amerikanerin Nina Simone, die eine prominente Gestalt innerhalb der Bürgerrechtsbewegung in den Vereinigten Staaten war, und zum anderen die Südafrikanerin Miriam Makeba, die aus dem Exil eine wichtige Rolle als Aktivistin gegen das Apartheid-Regime in Südafrika spielte. Beide Musikerinnen trugen auf vielfältige und bedeutsame Weise zur jeweiligen sozialen Bewegung bei. Dies geschah insbesondere durch Songs, in denen sie den Kampf gegen Rassenungleichheit in ihrem jeweiligen Heimatland thematisierten, wodurch ihre Handlungsräume, in diesem Fall ihr politisches Engagement und ihre Musik, verschmolzen. Mit dieser Masterarbeit soll gezeigt werden, dass ihr Aktivismus innerhalb dieser sozialen Bewegungen ihre Karrieren, ihre Musik sowie ihre Privatleben und die politische Rolle von Künstlerinnen ambivalent beeinflusste. Das Ziel ist hierbei, die verflochtene Geschichte von sozialen Bewegungen und Musik in Verbindung mit der anhaltenden Problematik geschlechtsspezifischer Diskriminierung gegenüber Frauen und Rassismus auf einer nationalen, sowie internationalen Ebene zu präsentieren.
description: This master's thesis analyses the connection between social movements and music as a social and cultural phenomenon with a lasting impact as a non-violent protest tool, a means of empowerment, and facilitator of social change. The following text is a case study of two influential Black female artists who “raised their voices” within the context of two of the most important social movements of the 20th century: On the one hand the American Nina Simone, a prominent figure within the Civil Rights Movement in the United States, and on the other hand the South African Miriam Makeba, who played an important role as an exiled activist against the Apartheid regime in South Africa. Both musicians contributed to the respective movements in various impactful ways, particularly through songs that thematised the struggles of racial inequality in their home countries through which their fields of action, i.e. political engagement and music, were fused. This paper seeks to demonstrate that their activism within these movements had an ambivalent influence on their careers, their music and their personal lives, as well as on the political role of female artists. It aims to showcase the interwoven history of social movements and music in connection to the ever-present continuous problem of gender bias and racism on a national and international scale.
Supplementary material from Role of intracellular poroelasticity on freezing-induced deformation of cells in engineered tissues
Creators: name: Soham Ghosh
name: Altug Ozcelikkale
name: J. Craig Dutton
name: Bumsoo Han
Publisher: name: The Royal Society
Year: 2016
Subjects: subject: Biological Engineering
subject: 110601 Biomechanics
subject: FOS: Health sciences
subject: 90301 Biomaterials
subject: FOS: Medical engineering

description: Contains supplementary text, figures and movie descriptions
Structured free-water clusters near lubricating surfaces are essential in water-based lubrication
Creators: name: Jiapeng Hou
name: Veeregowda, Deepak H.
name: Vries, Joop De
name: Mei, Henny C. Van Der
name: Busscher, Henk J.
Publisher: name: The Royal Society
Year: 2016
Subjects: Biophysics

description: Figure S1. Decomposition of the of the Ge- and Si-electron binding energy peaks. and Figure S2. Second derivative of infrared spectra of the water peak on the Ge- and Si-crystal surfaces
Supplementary Figures from Estimating shifts in diversification rates based on higher-level phylogenies
Creators: name: Stadler, Tanja
name: Smrckova, Jana
Publisher: name: The Royal Society
Year: 2016
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 60102 Bioinformatics
subject: FOS: Computer and information sciences

description: PDF file with supplementary figures
Mathematical proofs from Estimating shifts in diversification rates based on higher-level phylogenies
Creators: name: Stadler, Tanja
name: Smrckova, Jana
Publisher: name: The Royal Society
Year: 2016
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 60102 Bioinformatics
subject: FOS: Computer and information sciences

description: PDF file with mathematical proofs
Electronic Supplementary Materials: Yawn duration predicts brain size and cortical neuron number in mammals from Yawn duration predicts brain weight and cortical neuron number in mammals
Creators: name: Gallup, Andrew C.
name: Church, Allyson M.
name: Pelegrino, Anthony J.
Publisher: name: The Royal Society
Year: 2016
Subjects: subject: Neuroscience
subject: 60801 Animal Behaviour
subject: FOS: Biological sciences

description: Supplemental statistical analysis and supporting data with URLs
Diagrammatic Homotopy Theories
Creators: name: Pérez Velasco, Pedro Pablo
Publisher: name: ETH Zurich
Year: 2022
Subjects: OPERADS (MATHEMATICS)
CATEGORY THEORY (ALGEBRA)
Rational homotopy theory

description: Along this work, we study the relation between diagrams and operads over several base categories, showing an equivalence of categories between product-preserving functors and the category of operads. We examine furthermore the adjunction between the category of simplicial sets and the opposite of the category of dg-commutative algebras, given by the Sullivan form and the induced operadic Quillen adjunction between simplicial operads and Hopf cooperads presented by B. Fresse. To that aim, we show that there is a Quillen adjunction between the categories of operads over the base categories and the functors to such base categories. We can then describe models and mapping spaces of operads in terms of diagrams. Last, an explicit construction of the adjoint between product-preserving functors and functors with codomain the category of simplicial sets is provided.
Structure-based design of selective phosphodiesterase 4B inhibitors based on ginger phenolic compounds
Creators: name: Xing, Ming
name: Akowuah, Gabriel Akyirem
name: Vertika Gautam
name: Gaurav, Anand
Publisher: name: Taylor & Francis
Year: 2016
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences

description: Phosphodiesterase 4 (PDE4) has been established as a drug target for inflammatory diseases of respiratory tract like asthma and chronic obstructive pulmonary disease. The selective inhibitors of PDE4B, a subtype of PDE4, are devoid of adverse effects like nausea and vomiting commonly associated with non-selective PDE4B inhibitors. This makes the development of PDE4B subtype selective inhibitors a desirable research goal. Thus, in the present study, molecular docking, molecular dynamic simulations and binding free energy were performed to explore potential selective PDE4B inhibitors based on ginger phenolic compounds. The results of docking studies indicate that some of the ginger phenolic compounds demonstrate higher selective PDE4B inhibition than existing selective PDE4B inhibitors. Additionally, 6-gingerol showed the highest PDE4B inhibitory activity as well as selectivity. The comparison of binding mode of PDE4B/6-gingerol and PDE4D/6-gingerol complexes revealed that 6-gingerol formed additional hydrogen bond and hydrophobic interactions with active site and control region 3 (CR3) residues in PDE4B, which were primarily responsible for its PDE4B selectivity. The results of binding free energy demonstrated that electrostatic energy is the primary factor in elucidating the mechanism of PDE4B inhibition by 6-gingerol. Dynamic cross-correlation studies also supported the results of docking and molecular dynamics simulation. Finally, a small library of molecules were designed based on the identified structural features, majority of designed molecules showed higher PDE4B selectivity than 6-gingerol. These results provide important structural features for designing new selective PDE4B inhibitors as anti-inflammatory drugs and promising candidates for synthesis and pre-clinical pharmacological investigations.
Inter-orbital singlet pairing in Sr$_2$RuO$_4$: a Hund's superconductor
Creators: name: Käser, Stefan
name: Strand, Hugo U. R.
name: Wentzell, Nils
name: Georges, Antoine
name: Parcollet, Olivier
name: Hansmann, Philipp
Publisher: name: arXiv
Year: 2021
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We study the superconducting gap function of Sr$_2$RuO$_4$. By solving the linearized Eliashberg equation with a correlated pairing vertex extracted from a dynamical mean-field calculation we identify the dominant pairing channels. An analysis of the candidate gap functions in orbital and quasiparticle band basis reveals that an inter-orbital singlet pairing of even parity is in agreement with experimental observations. It reconciles in particular the occurrence of a two-component order parameter with the presence of line-nodes of quasiparticles along the c-axis in the superconducting phase. The strong angular dependence of the gap along the Fermi surface is in stark contrast to its quasi-locality when expressed in the orbital basis. We identify local inter-orbital spin correlations as the driving force for the pairing and thus reveal the continuation of Hund's physics into the superconducting phase.
description: 20 pages, 12 figures
On the Viscous Cahn-Hilliard-Oono System with Chemotaxis and Singular Potential
Creators: name: He, Jingning
Publisher: name: arXiv
Year: 2021
Subjects: subject: Analysis of PDEs (math.AP)
subject: FOS: Mathematics
subject: 35A01, 35A02, 35K35, 35Q92, 76D05

description: We analyze a diffuse interface model that couples a viscous Cahn-Hilliard equation for the phase variable with a diffusion-reaction equation for the nutrient concentration. The system under consideration also takes into account some important mechanisms like chemotaxis, active transport as well as nonlocal interaction of Oono's type. When the spatial dimension is three, we prove the existence and uniqueness of global weak solutions to the model with singular potentials including the physically relevant logarithmic potential. Then we obtain some regularity properties of the weak solutions when $t>0$. In particular, with the aid of the viscous term, we prove the so-called instantaneous separation property of the phase variable such that it stays away from the pure states $\pm1$ as long as $t>0$. Furthermore, we study long-time behavior of the system, by proving the existence of a global attractor and characterizing its $ω$-limit set.
How to measure knowing without knowing? A systematic bibliometric mapping and visualization of relationships between the psychometric properties of rational and intuitive decision-making styles
Creators: name: Fellnhofer, Katharina
Publisher: name: ETH Zurich
Year: 2022
Subjects: Rational decision making
intuitive decision making
unconscious
systematic bibliometric mapping
bibliometric visualization

description: In this work, we investigate rational and intuitive decision-making styles via a literature review by taking advantage of advanced bibliometric analysis techniques. The aim of this mapping and clustering analysis is to systematically explore organizational research dedicated to cognitive styles to discover how the phenomenon of intuition shapes and is shaped by individuals in organizational contexts. This work aims to inspire future research, in particular for measuring intuitive decision making – that is, the unconscious form – with a particular focus on the organizational framework. The data examined from the Web of Science and Scopus databases comprise 20,582 peer reviewed documents published through the end of 2019. Based on this research review of decision-making styles across research domains and entrepreneurship literature in particular, this first systematic bibliometric mapping and visualization study offers insights and inspiration on how to measure and enhance intuition with a particular focus on the unconscious mind to investigate knowing without knowing with new approaches in the context of organizations.
Biofilm forming potential and antimicrobial susceptibility of newly emerged Western Australian Bordetella pertussis clinical isolates
Creators: name: Dorji Dorji
name: Graham, Ross M.
name: Richmond, Peter
name: Keil, Anthony
name: Trilochan K. Mukkur
Publisher: name: Taylor & Francis
Year: 2016
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Whooping cough caused by Bordetella pertussis is increasing in several countries despite high vaccine coverage. One potential reason for the resurgence is the emergence of genetic variants of the bacterium. Biofilm formation has recently been associated with the pathogenesis of B. pertussis. Biofilm formation of 21 Western Australian B. pertussis clinical isolates was investigated. All isolates formed thicker biofilms than the reference vaccine strain Tohama I while retaining susceptibility to ampicillin, erythromycin, azithromycin and streptomycin. When two biofilm-forming clinical isolates were compared with Tohama I, minimum bactericidal concentrations of antimicrobial agents increased. Isobaric tags for relative and absolute quantitation (iTRAQ)-based proteomic analysis revealed significant differences in protein expression in B. pertussis biofilms, providing an opportunity for identification of novel biofilm-associated antigens for incorporation in current pertussis vaccines to improve their protective efficacy. The study also highlights the importance of determining antibiograms for biofilms to formulate improved antimicrobial therapeutic regimens.
Atoms in a spin dependent optical potential: ground state topology and magnetization
Creators: name: Szulim, Piotr
name: Trippenbach, Marek
name: Band, Y. B.
name: Gajda, Mariusz
name: Brewczyk, Mirosław
Publisher: name: arXiv
Year: 2021
Subjects: subject: Quantum Physics (quant-ph)
subject: Quantum Gases (cond-mat.quant-gas)
subject: FOS: Physical sciences

description: We investigate a Bose-Einstein condensate of $F= 1$ $^{87}$Rb atoms in a 2D spin-dependent optical lattice generated by intersecting laser beams with a superposition of polarizations. For $^{87}$Rb the effective interaction of an atom with the electromagnetic field contains a scalar and a vector (called as fictitious magnetic field, $B_{fic}$) potentials. The Rb atoms behave as a quantum rotor (QR) with angular momentum given by the sum of the atomic rotational motion angular momentum and the hyperfine spin. The ground state of the QR is affected upon applying an external magnetic field, $B_{ext}$, perpendicular to the plane of QR motion and a sudden change of its topology occurs as the ratio $B_{ext}/B_{fic}$ exceeds critical value. It is shown that the change of topology of the QR ground state is a result of combined action of Zeeman and Einstein-de Haas effects. The first transfers atoms to the largest hyperfine component to polarize the sample along the field as the external magnetic field is increased. The second sweeps spin to rotational angular momentum, modifying the kinetic energy of the atoms.
description: 5 pages + Supplemental material