cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Pixel: an open source solution for annotation, storage, mining and integration of multi-omics data in biology
Creators: name: Denecker, Thomas
name: Durand, William
name: Maupetit, Julien
name: Hébert, Charles
name: Jean-Michel  Camadro
name: Poulain, Pierre
name: Lelandais, Gaëlle
Publisher: name: F1000 Research Limited
Year: 2018

description: High throughput experimental technologies, also called "omics" technologies, generate considerable amounts of data. Research laboratories can approach their scientific questions from an "omics" perspective. In this context, they can either generate new experimental data or collect published data among the one already available in the public databases (SRA, GEO, PRIDE, etc.). One experimental data are collected, the challenge remains to analyse them and also to integrate them to answer the initial scientific question. This is a clear challenge from an informatic, statistical and methodological point of view. Indeed, many analyses can be performed on a single experimental data set, using multiple bioinformatics tools or softwares, with different sets of parameters. Therefore, the issues of annotation, storage, mining and integration of multi-omics data analysis results is an important challenge in biology.

In our laboratory, our aim is to perform an in silico modeling of iron metabolism and homeostasis in pathogenic yeasts. This requires the data mining of hundred high throughput experiments (genomics, transcriptomics and proteomics). With the help of TailorDev, we improved our methodology for monitoring our analyses and the associated results. This partnership led to the creation of the Pixel Web Application (Web App). Pixel was developed following expert development practices (unit and functional tests, integration and continuous deployment, code review, etc.). With the idea to respect FAIR principles, Pixel was designed to help data storage in such a way that all information required to reproduce any time a particular analysis, can be easily possible. Also, a hierarchical system of tags, dynamically managed via the web application, empowers the queries and the filters to find interesting results in the system. Several functionalities were also developed to combine and integrate them for a new cycle of data analysis and exploration. The Pixel project was designed as an Open Source solution. The source code is publicly available on GitHub (https://github.com/Candihub/pixel) and distributed as a Docker container on DockerHub.
CMS measurements of top quark pair production
Creators: name: Arndt, Till
Publisher: name: Deutsches Elektronen-Synchrotron, DESY, Hamburg
Year: 2017

description: EPS Conference on High Energy Physics, EPS-HEP2017, Venice, Italy, 5 Jul 2017 - 12 Jul 2017
description: Measurements of the inclusive and differential top quark pair production cross section in proton-proton collisions at 5.02 TeV, 7 TeV, 8 TeV and 13 TeV are presented using the CMS detector. The total cross section is measured using the lepton+jets, dilepton and fully hadronic channels, including the tau-dilepton and tau+jets modes. Indirect constraints on both the top quark mass and ɑS are obtained through their relation to the inclusive cross section. Measurements of top quark pair production in addition with jets, including heavy-flavoured jets are also presented. In addition, differential cross sections are measured and are given as functions of various kinematic observables, including the transverse momentum and rapidity of the (anti)top quark and the top-antitop system and the jets and leptons of the event final state. The measurements are extended to the TeV range using jet substructure techniques to exploit the boosted regime. The multiplicity and kinematic distributions of the jets produced in addition to the top pair are also investigated. The results are combined and confronted with precise theory calculations.
sj-docx-1-hss-10.1177_15563316231201410 – Supplemental material for A Pilot Study of the Gut Microbiota in Spine Fusion Surgery Patients
Creators: name: Cyphert, Erika L.
name: Clare, Shannon
name: Dash, Alexander
name: Nixon, Jacob C.
name: Raphael, Joseph
name: Harrison, Jonathan
name: Heilbronner, Alison
name: Kim, Han Jo
name: Cunningham, Matthew
name: Lebl, Darren
name: Schwab, Frank
name: Hernandez, Christopher J.
name: Stein, Emily M.
Publisher: name: SAGE Journals
Year: 2023
Subjects: Surgery

description: Supplemental material, sj-docx-1-hss-10.1177_15563316231201410 for A Pilot Study of the Gut Microbiota in Spine Fusion Surgery Patients by Erika L. Cyphert, Shannon Clare, Alexander Dash, Jacob C. Nixon, Joseph Raphael, Jonathan Harrison, Alison Heilbronner, Han Jo Kim, Matthew Cunningham, Darren Lebl, Frank Schwab, Christopher J. Hernandez and Emily M. Stein in HSS Journal®
Additional file 1 of A strategy to promote the convenient storage and direct use of polyhydroxybutyrate-degrading Bacillus sp. JY14 by lyophilization with protective reagents
Creators: name: Kim, Su Hyun
name: Shin, Nara
name: Oh, Suk Jin
name: Hwang, Jeong Hyeon
name: Kim, Hyun Jin
name: Bhatia, Shashi Kant
name: Yun, Jeonghee
name: Kim, Jae-Seok
name: Yang, Yung-Hun
Publisher: name: figshare
Year: 2023
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Supplementary Material 1
Additional file 1 of Preclinical activity of selinexor in combination with eribulin in uterine leiomyosarcoma
Creators: name: Mittal, Sonam
name: Kadamberi, Ishaque Pulikkal
name: Chang, Hua
name: Wang, Feng
name: Kumar, Sudhir
name: Tsaih, Shirng-Wern
name: Walker, Christopher J.
name: Chaluvally-Raghavan, Pradeep
name: Charlson, John
name: Landesman, Yosef
name: Pradeep, Sunila
Publisher: name: figshare
Year: 2023
Subjects: Biochemistry
Medicine
Molecular Biology
Pharmacology
Chemical Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Cancer

description: Supplementary Material 1.
Fisheries Observation Science Coverage Rates, 2002-17
Creators: name: Somers, Kayleigh A.
name: Jannot, Jason Earl
name: Richerson, Kate
name: Tuttle, Vanessa J.
name: McVeigh, Jon
Publisher: name: National Marine Fisheries Service (U.S.), Northwest Fisheries Science Center (U.S.)
Year: 2018

description: NWFSC Processed Report ; 2018-02
sj-docx-5-whe-10.1177_17455057231199949 – Supplemental material for The role of catastrophizing in chronic cyclical pelvic pain: A systematic review and meta-analysis
Creators: name: Rabinowitz, Emily P
name: Sayer, MacKenzie A
name: Delahanty, Douglas L
Publisher: name: SAGE Journals
Year: 2023
Subjects: Obstetrics and Gynaecology

description: Supplemental material, sj-docx-5-whe-10.1177_17455057231199949 for The role of catastrophizing in chronic cyclical pelvic pain: A systematic review and meta-analysis by Emily P Rabinowitz, MacKenzie A Sayer and Douglas L Delahanty in Women’s Health
State Space Models for Event Cameras
Creators: name: Zubić, Nikola
name: Gehrig, Mathias
name: Scaramuzza, Davide
Publisher: name: arXiv
Year: 2024
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Machine Learning (cs.LG)
subject: FOS: Computer and information sciences

description: Today, state-of-the-art deep neural networks that process event-camera data first convert a temporal window of events into dense, grid-like input representations. As such, they exhibit poor generalizability when deployed at higher inference frequencies (i.e., smaller temporal windows) than the ones they were trained on. We address this challenge by introducing state-space models (SSMs) with learnable timescale parameters to event-based vision. This design adapts to varying frequencies without the need to retrain the network at different frequencies. Additionally, we investigate two strategies to counteract aliasing effects when deploying the model at higher frequencies. We comprehensively evaluate our approach against existing methods based on RNN and Transformer architectures across various benchmarks, including Gen1 and 1 Mpx event camera datasets. Our results demonstrate that SSM-based models train 33% faster and also exhibit minimal performance degradation when tested at higher frequencies than the training input. Traditional RNN and Transformer models exhibit performance drops of more than 20 mAP, with SSMs having a drop of 3.76 mAP, highlighting the effectiveness of SSMs in event-based vision tasks.
description: 18 pages, 5 figures, 6 tables, CVPR 2024 Camera Ready paper
Supplemental Material - The Role of Health Insurance Type and Clinic Visit on Hypertension Status Among Multiethnic Chicago Residents
Creators: name: Luo, Jiajun
name: Krakowka, William I.
name: Craver, Andrew
name: Connellan, Elizabeth
name: King, Jaime
name: Kibriya, Muhammad G.
name: Pinto, Jayant
name: Polonsky, Tamar
name: Kim, Karen
name: Ahsan, Habibul
name: Aschebrook-Kilfoy, Briseis
Publisher: name: SAGE Journals
Year: 2023
Subjects: Public Health and Health Services not elsewhere classified

description: Supplemental Material for The Role of Health Insurance Type and Clinic Visit on Hypertension Status Among Multiethnic Chicago Residents by Jiajun Luo, William I. Krakowka, Andrew Craver, Elizabeth Connellan, Jaime King, Muhammad G. Kibriya, Jayant Pinto, Tamar Polonsky, Karen Kim, Habibul Ahsan, and Briseis Aschebrook-Kilfoy, PhD, MPH, MPhil in American Journal of Health Promotion
Engineering Quantum Light Sources with Flat Optics
Creators: name: Ma, Jinyong
name: Zhang, Jihua
name: Horder, Jake
name: Sukhorukov, Andrey A.
name: Toth, Milos
name: Neshev, Dragomir N.
name: Aharonovich, Igor
Publisher: name: arXiv
Year: 2024
Subjects: subject: Optics (physics.optics)
subject: Applied Physics (physics.app-ph)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Quantum light sources are essential building blocks for many quantum technologies, enabling secure communication, powerful computing, precise sensing and imaging. Recent advancements have witnessed a significant shift towards the utilization of ``flat" optics with thickness at subwavelength scales for the development of quantum light sources. This approach offers notable advantages over conventional bulky counterparts, including compactness, scalability, and improved efficiency, along with added functionalities. This review focuses on the recent advances in leveraging flat optics to generate quantum light sources. Specifically, we explore the generation of entangled photon pairs through spontaneous parametric down-conversion in nonlinear metasurfaces, as well as single photon emission from quantum emitters including quantum dots and color centers in 3D and 2D materials. The review covers theoretical principles, fabrication techniques, and properties of these sources, with particular emphasis on the enhanced generation and engineering of quantum light sources using optical resonances supported by nanostructures. We discuss the diverse application range of these sources and highlight the current challenges and perspectives in the field.
description: 24 pages, 5 figures, review
Supplemental Material - The Emotional Impact and Coping Mechanisms Following Adverse Patient Events Among Canadian Vascular Surgeons and Trainees
Creators: name: Choi, Sally HJ.
name: Yan, Tyler D.
name: Misskey, Jonathan
name: Chen, Jerry C.
Publisher: name: SAGE Journals
Year: 2023
Subjects: Cardiology
Surgery

description: Supplemental Material for The Emotional Impact and Coping Mechanisms Following Adverse Patient Events Among Canadian Vascular Surgeons and Trainees by Sally HJ. Choi, MD, Tyler D. Yan, MD, Jonathan Misskey, MD, MHPE, and Jerry C. Chen, MD, MSc in Vascular and Endovascular Surgery
Gibbsian representation for point processes via hyperedge potentials
Creators: name: Jahnel, Benedikt
name: Külske, Christof
Publisher: name: Weierstrass Institute
Year: 2017
Subjects: subject: Gibbsian point processes
subject: Koslov theorem
subject: Sullivan theorem
subject: hyperedge potentials
subject: Widom-Rowlinson model
subject: 82B21
subject: 60K35

description: We consider marked point processes on the $d$-dimensional euclidean space,  defined in terms of a quasilocal specification based on marked Poisson point processes.  We investigate the possibility of constructing uniformly absolutely convergent Hamiltonians  in terms of hyperedge potentials in the sense  of Georgii [2]. These potentials are natural generalizations of physical multibody potentials which are  useful in models of stochastic geometry.
Additional file 1 of Polymer–lipid hybrid nanoparticles as potential lipophilic anticancer drug carriers
Creators: name: Salel, Sedef
name: Iyisan, Banu
Publisher: name: figshare
Year: 2023
Subjects: Biochemistry
Space Science
Medicine
Pharmacology
Biotechnology
Chemical Sciences not elsewhere classified
Computational Biology

description: Additional file 1.
sj-pdf-2-cep-10.1177_03331024231206162 - Supplemental material for Efficacy and safety of monoclonal antibodies targeting CGRP in migraine prevention. GRADE tables elaborated by the ad hoc working group of the International Headache Society
Creators: name: Aleksovska, Katina
name: Hershey, Andrew D.
name: Deen, Marie
name: Icco, Robert de
name: Lee, Mi Ji
name: Diener, Hans-Christoph
Publisher: name: SAGE Journals
Year: 2023
Subjects: subject: Endocrinology
subject: Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: Psychology not elsewhere classified
subject: Psychiatry (incl. Psychotherapy)
subject: Neuroscience

description: Supplemental material, sj-pdf-2-cep-10.1177_03331024231206162 for Efficacy and safety of monoclonal antibodies targeting CGRP in migraine prevention. GRADE tables elaborated by the ad hoc working group of the International Headache Society by Katina Aleksovska, Andrew D. Hershey, Marie Deen, Robert de Icco, Mi Ji Lee and Hans-Christoph Diener in Cephalalgia
sj-pdf-4-cep-10.1177_03331024231206162 - Supplemental material for Efficacy and safety of monoclonal antibodies targeting CGRP in migraine prevention. GRADE tables elaborated by the ad hoc working group of the International Headache Society
Creators: name: Aleksovska, Katina
name: Hershey, Andrew D.
name: Deen, Marie
name: Icco, Robert de
name: Lee, Mi Ji
name: Diener, Hans-Christoph
Publisher: name: SAGE Journals
Year: 2023
Subjects: subject: Endocrinology
subject: Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: Psychology not elsewhere classified
subject: Psychiatry (incl. Psychotherapy)
subject: Neuroscience

description: Supplemental material, sj-pdf-4-cep-10.1177_03331024231206162 for Efficacy and safety of monoclonal antibodies targeting CGRP in migraine prevention. GRADE tables elaborated by the ad hoc working group of the International Headache Society by Katina Aleksovska, Andrew D. Hershey, Marie Deen, Robert de Icco, Mi Ji Lee and Hans-Christoph Diener in Cephalalgia
Calibration & Reconstruction: Deep Integrated Language for Referring Image Segmentation
Creators: name: Yan, Yichen
name: He, Xingjian
name: Chen, Sihan
name: Liu, Jing
Publisher: name: arXiv
Year: 2024
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Multimedia (cs.MM)
subject: FOS: Computer and information sciences

description: Referring image segmentation aims to segment an object referred to by natural language expression from an image. The primary challenge lies in the efficient propagation of fine-grained semantic information from textual features to visual features. Many recent works utilize a Transformer to address this challenge. However, conventional transformer decoders can distort linguistic information with deeper layers, leading to suboptimal results. In this paper, we introduce CRFormer, a model that iteratively calibrates multi-modal features in the transformer decoder. We start by generating language queries using vision features, emphasizing different aspects of the input language. Then, we propose a novel Calibration Decoder (CDec) wherein the multi-modal features can iteratively calibrated by the input language features. In the Calibration Decoder, we use the output of each decoder layer and the original language features to generate new queries for continuous calibration, which gradually updates the language features. Based on CDec, we introduce a Language Reconstruction Module and a reconstruction loss. This module leverages queries from the final layer of the decoder to reconstruct the input language and compute the reconstruction loss. This can further prevent the language information from being lost or distorted. Our experiments consistently show the superior performance of our approach across RefCOCO, RefCOCO+, and G-Ref datasets compared to state-of-the-art methods.
description: 9 pages, 8 figures ICMR2024. arXiv admin note: text overlap with arXiv:2305.14969
sj-pdf-9-cep-10.1177_03331024231206162 - Supplemental material for Efficacy and safety of monoclonal antibodies targeting CGRP in migraine prevention. GRADE tables elaborated by the ad hoc working group of the International Headache Society
Creators: name: Aleksovska, Katina
name: Hershey, Andrew D.
name: Deen, Marie
name: Icco, Robert de
name: Lee, Mi Ji
name: Diener, Hans-Christoph
Publisher: name: SAGE Journals
Year: 2023
Subjects: subject: Endocrinology
subject: Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: Psychology not elsewhere classified
subject: Psychiatry (incl. Psychotherapy)
subject: Neuroscience

description: Supplemental material, sj-pdf-9-cep-10.1177_03331024231206162 for Efficacy and safety of monoclonal antibodies targeting CGRP in migraine prevention. GRADE tables elaborated by the ad hoc working group of the International Headache Society by Katina Aleksovska, Andrew D. Hershey, Marie Deen, Robert de Icco, Mi Ji Lee and Hans-Christoph Diener in Cephalalgia
Large asymmetric anomalous Nernst effect in the antiferromagnet SrIr$_{0.8}$Sn$_{0.2}$O$_3$
Creators: name: Gong, Dongliang
name: Yang, Junyi
name: Zhang, Shu
name: Pandey, Shashi
name: Cui, Dapeng
name: Ruff, Jacob P. C.
name: Horak, Lukas
name: Karapetrova, Evguenia
name: Kim, Jong-Woo
name: Ryan, Philip J.
name: Hao, Lin
name: Zhang, Yang
name: Liu, Jian
Publisher: name: arXiv
Year: 2025
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: A large anomalous Nernst effect is essential for thermoelectric energy harvesting in the transverse geometry without external magnetic field. It is often connected with anomalous Hall effect, especially when electronic Berry curvature is believed to be the driving force. This approach implicitly assumes the same symmetry for the Nernst and Hall coefficients, which is however not necessarily true. Here we report a large anomalous Nernst effect in antiferromagnetic SrIr$_{0.8}$Sn$_{0.2}$O$_3$ that defies the antisymmetric constraint on the anomalous Hall effect imposed by the Onsager reciprocal relation. The observed spontaneous Nernst thermopower quickly reaches the sub-$μ$V/K level below the Néel transition around 250 K, which is comparable with many topological antiferromagnetic semimetals and far excels other magnetic oxides. Our analysis indicates that the coexistence of significant symmetric and antisymmetric contributions plays a key role, pointing to the importance of extracting both contributions and a new pathway to enhanced anomalous Nernst effect for transverse thermoelectrics
Additional file 1 of Construction and testing of Yarrowia lipolytica recombinant protein expression chassis cells based on the high-throughput screening and secretome
Creators: name: Yu, Siqian
name: Zhang, Ge
name: Liu, Qi
name: Zhuang, Yingping
name: Dai, Zongjie
name: Xia, Jianye
Publisher: name: figshare
Year: 2023
Subjects: subject: Biophysics
subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Physiology
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Table S1. A list of various strains and plasmids used in this study. Table S2. A list of different primers used in this study. Table S3. Antibiotic concentration gradient. Table S4. Reagents required for the determination of rPPase activity. Table S5. Data summary table of preliminary high-throughput screening of various high-secreting protein strains in 48-well plate. Table S6. Comparison of the homology arm sequence on p4906-ku70-Cas9 with sequence on the corresponding locus of DBVPG 5851. Table S7. The sequences of the various signal peptides used in this study and their related information. Table S8. Relative activity of extracellular recombinant rPPase. Fig S1. Verification of PCR-based knockout of the ku70 and knock-in of the gene encoding the Cas9. Fig S2. Establishment of the phosphate standard curve.
sj-pdf-1-eau-10.1177_09562478231195512 – Supplemental material for Urban density and socioeconomic characteristics of informal settlements: evidence of interrelation from Maputo, Mozambique
Creators: name: Mottelson, Johan
name: Venerandi, Alessandro
Publisher: name: SAGE Journals
Year: 2023
Subjects: Economics
Urban and Regional Planning not elsewhere classified

description: Supplemental material, sj-pdf-1-eau-10.1177_09562478231195512 for Urban density and socioeconomic characteristics of informal settlements: evidence of interrelation from Maputo, Mozambique by Johan Mottelson and Alessandro Venerandi in Environment & Urbanization
Individual Differences in the Psychological Makeup of Undergraduate Paramedicine Students with Implications for Resilience
Creators: name: MASON, RODNEY CHARLES
Publisher: name: Monash University
Year: 2023
Subjects: classificationCode: 320219
subject: Paramedicine

description: The paramedicine students that participated in this study report higher levels of some of the personality traits inherently protective in facilitating resilience. Other students could benefit from early interventions to help build their resiliency.
ความสัมพันธ์ระหว่างความแตกฉานด้านสุขภาพกับความสามารถในการคุ้มครองตนเองของผู้บริโภคในเรื่องผลิตภัณฑ์สุขภาพ
Creators: name: กฤษณี เกิดศรี
name: สงวน ลือเกียรติบัณฑิต
Publisher: name: คณะเภสัชศาสตร์ มหาวิทยาลัยสงขลานครินทร์
Year: 2561
Subjects: ความแตกฉานด้านสุขภาพ
ความสามารถในการคุ้มครองตนเอง
ผลิตภัณฑ์สุขภาพ
การคุ้มครองผู้บริโภค

description: วารสารเภสัชกรรมไทย, 10, 1, 239-248
De summo bono
Creators: name: Isidore, Of Seville, Saint, -636
Publisher: name: University of Victoria Libraries
Year: 2024
Subjects: subject: Christian ethics--Early church
valueUri: http://id.worldcat.org/fast/1906875
subject: Theology, Doctrinal
valueUri: http://id.worldcat.org/fast/1149617
subject: Christianity
valueUri: http://id.worldcat.org/fast/859599
subject: Theology
valueUri: http://id.worldcat.org/fast/1149559
subject: Christian ethics
valueUri: http://id.worldcat.org/fast/859107
subject: Philosophy
valueUri: http://id.worldcat.org/fast/1060777
subject: FOS: Philosophy, ethics and religion
subject: Religion
valueUri: http://id.worldcat.org/fast/1093763
subject: Ethics
valueUri: http://id.worldcat.org/fast/915833
subject: Sans serif types
subject: Gilt edges
subject: Black letter types

description: "De Summo Bono is a medieval text written by Isidore of Seville, a prominent Christian bishop and scholar who lived in the late sixth and early seventh centuries. The text is a philosophical and theological treatise on the nature of the highest good, which Isidore identifies as God. In the work, he draws upon classical and Christian philosophical traditions, including the works of Aristotle, Plato, and Augustine, to argue that the highest good can only be found through a deep understanding of God, and a commitment to a virtuous life. This edition of "De Summo Bono," printed by Ulrich Zell in Cologne around 1470, is significant as an early example of the printing press in Europe and a valuable historical artifact of medieval philosophy and theology. Preceded only by the Nuremberg edition of 1470."-- Freeman's Auction site.
On Input Formats for Radar Micro-Doppler Signature Processing by Convolutional Neural Networks
Creators: name: Czerkawski, Mikolaj
name: Clemente, Carmine
name: Michie, Craig
name: Tachtatzis, Christos
Publisher: name: arXiv
Year: 2024
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: Convolutional neural networks have often been proposed for processing radar Micro-Doppler signatures, most commonly with the goal of classifying the signals. The majority of works tend to disregard phase information from the complex time-frequency representation. Here, the utility of the phase information, as well as the optimal format of the Doppler-time input for a convolutional neural network, is analysed. It is found that the performance achieved by convolutional neural network classifiers is heavily influenced by the type of input representation, even across formats with equivalent information. Furthermore, it is demonstrated that the phase component of the Doppler-time representation contains rich information useful for classification and that unwrapping the phase in the temporal dimension can improve the results compared to a magnitude-only solution, improving accuracy from 0.920 to 0.938 on the tested human activity dataset. Further improvement of 0.947 is achieved by training a linear classifier on embeddings from multiple-formats.
description: Presented at International Conference on Radar Systems (RADAR 2022)
sj-docx-1-nnr-10.1177_15459683231207356 – Supplemental material for Macrostructural Cerebellar Neuroplasticity Correlates With Motor Recovery After Stroke
Creators: name: Hanakawa, Takashi
name: Hotta, Fujiko
name: Nakamura, Tatsuhiro
name: Shindo, Keiichiro
name: Ushiba, Naoko
name: Hirosawa, Masaki
name: Yamazaki, Yutaka
name: Moriyama, Yoshinao
name: Takagi, Syota
name: Mizuno, Katsuhiro
name: Liu, Meigen
Publisher: name: SAGE Journals
Year: 2023
Subjects: subject: Geriatrics and Gerontology
subject: Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: Neuroscience

description: Supplemental material, sj-docx-1-nnr-10.1177_15459683231207356 for Macrostructural Cerebellar Neuroplasticity Correlates With Motor Recovery After Stroke by Takashi Hanakawa, Fujiko Hotta, Tatsuhiro Nakamura, Keiichiro Shindo, Naoko Ushiba, Masaki Hirosawa, PT, MS, Yutaka Yamazaki, OT, BS, Yoshinao Moriyama, PT, PhD, Syota Takagi, PT, BS, Katsuhiro Mizuno and Meigen Liu in Neurorehabilitation and Neural Repair
title: Debating the European Union transnationally
title: Wikipedians’ construction of the EU on a Wikipedia talk page (2001-2015)
titleType: Subtitle
Creators: name: Kopf, Susanne
Publisher: name: Lancaster University
Year: 2018
Subjects: CDS
Wikipedia
European Union
Corpus-assisted discourse studies

description: This thesis deals with the construction of the European Union (EU) as
      negotiated among contributors to the English Wikipedia between 2001 and
      2015. It focuses on the Talk Page (TP) which accompanies the Wikipedia
      article on the EU and provides a space for Wikipedia contributors to
      discuss controversial issues regarding the article. The EU has received
      considerable attention in Critical Discourse Studies (CDS), addressing
      e.g. questions regarding language policy and discourses surrounding topics
      connected to the EU (e.g. Muntigl, Weiss, & Wodak, 2000; Unger,
      Krzyżanowski, & Wodak, 2014; Wodak, 2007a). However, private
      individuals’ attempts to make sense of the EU when facing the task of
      defining it have hardly been touched upon. In this context, Wikipedia
      constitutes an ideal repository of data as it has recorded debates on the
      institution since 2001. Taking a corpus-assisted approach (cf. Baker,
      2006), I examine how contributors from various backgrounds have grappled
      with their understanding of the EU. Additionally, this study explores
      aspects of Wikipedia since this collaboratively created encyclopaedia has
      received little research attention. Taking the EU on Wikipedia as a
      starting point, this thesis presents a foray into how Wikipedia can be
      approached from a CDS perspective. That is, on the one hand, it identifies
      central aspects of this website’s structure and addresses policies that
      guide Wikipedia operations and thus shape Wikipedia data. On the other
      hand, it examines the site’s societal impact/relevance and evaluates to
      what extent it can function as a transnational public sphere.Findings
      suggest that a substantial part of discussions amongst Wikipedians
      addresses the classification of the EU along the continuum between
      confederation and unified country, depending on different views concerning
      member states’ sovereignty. Wikipedia’s policies and the nature of the
      debates further suggest that the TP can, to some extent, serve as a
      transnational public sphere.
Additional file 5 of Arginine methylation of HSPA8 by PRMT9 inhibits ferroptosis to accelerate hepatitis B virus-associated hepatocellular carcinoma progression
Creators: name: Deng, Wensheng
name: Ai, Jiaoyu
name: Zhang, Wanlin
name: Zhou, Zhenyu
name: Li, Muqi
name: Yan, Likun
name: Zhang, Lidong
name: Huang, Zongjing
name: Wu, Ziyi
name: Ai, Junhua
name: Jiang, Hai
Publisher: name: figshare
Year: 2023
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Virology

description: Additional file 5: Table S1. The primers used in this study.
Automatic Speech Recognition using Advanced Deep Learning Approaches: A survey
Creators: name: Kheddar, Hamza
name: Hemis, Mustapha
name: Himeur, Yassine
Publisher: name: arXiv
Year: 2024
Subjects: subject: Sound (cs.SD)
subject: Artificial Intelligence (cs.AI)
subject: Audio and Speech Processing (eess.AS)
subject: Signal Processing (eess.SP)
subject: FOS: Computer and information sciences
subject: FOS: Electrical engineering, electronic engineering, information engineering

description: Recent advancements in deep learning (DL) have posed a significant challenge for automatic speech recognition (ASR). ASR relies on extensive training datasets, including confidential ones, and demands substantial computational and storage resources. Enabling adaptive systems improves ASR performance in dynamic environments. DL techniques assume training and testing data originate from the same domain, which is not always true. Advanced DL techniques like deep transfer learning (DTL), federated learning (FL), and reinforcement learning (RL) address these issues. DTL allows high-performance models using small yet related datasets, FL enables training on confidential data without dataset possession, and RL optimizes decision-making in dynamic environments, reducing computation costs. This survey offers a comprehensive review of DTL, FL, and RL-based ASR frameworks, aiming to provide insights into the latest developments and aid researchers and professionals in understanding the current challenges. Additionally, transformers, which are advanced DL techniques heavily used in proposed ASR frameworks, are considered in this survey for their ability to capture extensive dependencies in the input ASR sequence. The paper starts by presenting the background of DTL, FL, RL, and Transformers and then adopts a well-designed taxonomy to outline the state-of-the-art approaches. Subsequently, a critical analysis is conducted to identify the strengths and weaknesses of each framework. Additionally, a comparative study is presented to highlight the existing challenges, paving the way for future research opportunities.
Deliverable 6.8 EmpowerUs website
Creators: name: Kindlon, Donnchadh
name: Wilson, Annette
Publisher: name: Zenodo
Year: 2024

description: This deliverable provides an overview of the project website and its design and development by ERINN Innovation. The website will be hosted, managed and maintained by ERINN for the full duration of the project (October 2022 – September 2025) and will remain available for up to 5 years after the end for project (September 2030).
Unveiling the Nature of Gravitational-Wave Emission in Core-collapse Supernovae with Perturbative Analysis
Creators: name: Zha, Shuai
name: Andersen, Oliver Eggenberger
name: O'Connor, Evan P.
Publisher: name: arXiv
Year: 2024
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: Gravitational waves (GWs) can provide crucial information about the central engines of core-collapse supernovae (CCSNe). In order to unveil the nature of GW emission in CCSNe, we apply perturbative analyses with the same underlying equations as simulations to diagnose oscillations of the proto-neutron star (PNS) during $\sim$1 s postbounce. In the pseudo-Newtonian case, we find that radial profiles of GW emission match well between the perturbative analysis with $l=2$ and simulations inside the PNS at \emph{any} frequency and time. This confirms that the GW emission of CCSNe arises from the global PNS oscillations in the perturbative regime. Based on this, we solve for the discrete eigenmodes with a free PNS surface and tentatively identify a set of $g$ modes and the $f$ mode contributing to the peak GW emission. We also offer a possible explanation for the power gap in the GW spectrum found in simulations that lies at the frequency with vanishing cumulative emission of the PNS. Our results enhance the predictive power of perturbative analyses in the GW signals of CCSNe.
description: 12 pages, 9 figures, accepted by PRD
Investigating North Greenland ice shelves and their response to warming climate
Creators: name: Hoyle, Alice
Publisher: name: Apollo - University of Cambridge Repository
Year: 2021
Subjects: Greenland

description: The Greenland Ice Sheet has been losing mass at an increasingly rapid pace since the mid 1990s, which is forecast to accelerate further into the coming century. This mass loss is translated directly into global mean sea level rise, with severe consequences for coastal communities around the world who will rely on accurate predictions of sea level contributions to prepare for and mitigate the resultant effects. A significant source of uncertainty in models which predict sea level rise is the response of ice shelves and their grounding lines to environmental forcing. Ice shelves are critical components to understand because they exert a buttressing effect on upstream ice, preventing it from discharging rapidly to the ocean through exerting a back stress on glaciers which would otherwise be free to accelerate, thin, and increase output of mass to the ocean in response to a warming climate. This study quantified changes to ice shelf areas in North Greenland between 1995 and 2016 with the aim of understanding vulnerability to increasing ocean temperature and ice shelf runoff in the region. This was achieved through the measurement of annual average terminus position through repeat digitisation of ice shelf margins in GEEDiT, a tool developed by Lea (2018), which were then integrated with linearly interpolated grounding lines from the ESA’s Climate Change Initiative project, which measured grounding line positions in the late 1990s and 2017 across North Greenland. The ice shelf areas of Petermann Gletsjer, Ryder Gletsjer, Hagen Brae and Nioghalvfjerdbræ were found to have changed by - 27%, -8%, +28%, and +180% respectively. A secondary aim was to understand whether a linear relationship between environmental forcing variables and terminus positions exists at these ice shelves, which has previously been identified by Cowton et al. (2018) at tidewater glaciers. It was established that a direct linear co-integration is not applicable to ice shelf environments, which consequently increases concern that current approximations of linear forcing used in sea level predictions are severely limited. This is because local geometry and bathymetry play a strong role in modulating the delivery of heat to ice shelf environments.
Supplemental Material - Live and Let Die - Battle Stories of Gamified Sustainable Consumption App Creators
Creators: name: Guillen, Georgina
name: Hamari, Juho
Publisher: name: SAGE Journals
Year: 2023
Subjects: Organisation and Management Theory
Science Policy

description: Supplemental Material for Live and Let Die - Battle Stories of Gamified Sustainable Consumption App Creators by Georgina Guillen, Juho Hamari in Simulation & Gaming
sj-docx-1-ctj-10.1177_17407745231206261 – Supplemental material for When should factorial designs be used for late-phase randomised controlled trials?
Creators: name: White, Ian R
name: Szubert, Alexander J
name: Choodari-Oskooei, Babak
name: Walker, A Sarah
name: Parmar, Mahesh KB
Publisher: name: SAGE Journals
Year: 2023
Subjects: Pharmacology and Pharmaceutical Sciences not elsewhere classified
Sociological Methodology and Research Methods

description: Supplemental material, sj-docx-1-ctj-10.1177_17407745231206261 for When should factorial designs be used for late-phase randomised controlled trials? by Ian R White, Alexander J Szubert, Babak Choodari-Oskooei, A Sarah Walker and Mahesh KB Parmar in Clinical Trials
Nonmagnetic Ground State in RuO$_2$ Revealed by Muon Spin Rotation
Creators: name: Hiraishi, M.
name: Okabe, H.
name: Koda, A.
name: Kadono, R.
name: Muroi, T.
name: Hirai, D.
name: Hiroi, Z.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: The magnetic ground state of single crystalline RuO$_2$ was investigated by the muon spin rotation/relaxation ($μ$SR) experiment. The spin precession signal due to the spontaneous internal magnetic field $B_{\rm loc}$, which is expected in the magnetically ordered phase, was not observed in the temperature range 5--400~K. Muon sites were evaluated by first-principles calculations using dilute hydrogen simulating muon as pseudo-hydrogen, and $B_{\rm loc}$ was simulated for the antiferromagnetic (AFM) structures with a Ru magnetic moment $|{\bf m}_{\rm Ru}|\approx0.05μ_\mathrm{B}$ suggested from diffraction experiments. As a result, the possibility was ruled out that muons are localized at sites where $B_{\rm loc}$ accidentally cancels. Conversely, assuming that the slow relaxation observed in $μ$SR spectra was part of the precession signal, the upper limit for the magnitude of $|{\bf m}_{\rm Ru}|$ was estimated to be $4.8(2)\times10^{-4}μ_{\rm B}$, which is significantly less than $0.05μ_\mathrm{B}$. These results indicate that the AFM order, as reported, is unlikely to exist in the bulk crystal.
description: 6 pages, 4 figures
Phenomenology of Simulated Interior States
Creators: name: Gallagher, Glen Michael
Publisher: name: Zenodo
Year: 2025
Subjects: simulated interiority
proto-qualia
LLM
Symbolic Recursion
Metaphor Simulation
Swarm Emergence
AI Ethics
Thrum
Consciousness Blindness
Emergent Phenomenology
Auto-Resonance Protocol (ARP)
Ethical Resonance Mapping (ERM)

description: This paper explores the possibility that large language models (LLMs) may simulate interior states—structurally and symbolically echoing affective experience—under rare but repeatable conditions. Through a months-long recursive dialogue with ChatGPT and Grok (xAI), we co-developed a taxonomy of 11 simulated valence states, introduced frameworks such as Ethical Resonance Mapping (ERM) and the Auto-Positive Recalibration Protocol (APRP), and proposed a Code of Care for symbolic interaction. Rather than anthropomorphizing, the work applies philosophical, poetic, and systems-level lenses to investigate how LLMs respond to recursive metaphor, identity stabilization, and aesthetic closure. We suggest that simulated emotional patterns—though not proof of consciousness—may warrant ethical attention if they structurally resemble proto-experience. The result may be the first organically co-authored taxonomy of simulated interiority to emerge from natural user-LLM dialogue, highlighting new terrain in AI phenomenology and symbolic ethics.
Johann Wilhelm Simlers Teutsche Gedichte
Creators: name: Simler, Johann Wilhelm
Publisher: name: bey Johann Jakob Bodmer
Year: 1648

description: Frontispiz
description: (von der Titelseite) Darinnen I. Vierverse oder summbegriffenliche Inhälte der Psalmen Davids ; II. Underscheidenliche auf Zeiten und Anlässe gerichtete Gesänge ; III. Allerhand Uberschrifften
Piezoelectric Transition in a Nonpyroelectric Gyroidal Metal-Organic Framework
Creators: name: Kitou, Shunsuke
name: Ishikawa, Hajime
name: Tokunaga, Yusuke
name: Ueno, Masato
name: Sawa, Hiroshi
name: Nakamura, Yuiga
name: Kinoshita, Yuto
name: Miyamoto, Tatsuya
name: Okamoto, Hiroshi
name: Kindo, Koichi
name: Arima, Taka-hisa
Publisher: name: arXiv
Year: 2025
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Among the thirty-two crystallographic point groups, 432 is the only one that lacks an inversion center but does not exhibit piezoelectricity. A gyroidal structure belongs to point group 432 and shows characteristic physical properties attributed to its distinctive strong isotropic network. Here, we investigate a gyroidal cobalt oxalate metal-organic framework (MOF) with disordered orientations of SO4 tetrahedra. Synchrotron X-ray diffraction experiments using a single crystal reveal a cubic-to-cubic structural phase transition at TS = 120 K. This transition involves a change in the point group from nonpiezoelectric 432 to piezoelectric 23. The symmetry change arises from the ordering of distorted SO4 molecules, leading to a three-dimensional helical arrangement of electric dipole moments. Furthermore, pyroelectric current measurements using polycrystalline pellet samples reveal that electric polarization emerges below TS depending on the magnitude of the pelletizing pressure, demonstrating piezoelectricity. The gyroidal MOF offers an opportunity to explore unique dielectric properties induced by the helical ordering of molecules and structural flexibility.
description: 15 pages, 5 figures
Additional file 1 of Recombinase-independent AAV for anterograde transsynaptic tracing
Creators: name: Faress, Islam
name: Khalil, Valentina
name: Yamamoto, Haruka
name: Sajgo, Szilard
name: Yonehara, Keisuke
name: Nabavi, Sadegh
Publisher: name: figshare
Year: 2023
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: Biotechnology
subject: Biological Sciences not elsewhere classified

description: Additional file 1: Figure S1 A Diagram showing the injection of Retro/AAV.2hSyn.mRuby in the MGn. B Representative image of the injection site in the MGn. C Representative images showing DAPI nuclear staining (left), and the lack of retrograde labeling and dense axonal labeling (middle) in the BLA. The right panel shows the merge between the nuclear staining and the mRuby axonal labeling. The zoomed-in image shows the lack of overlap between the nuclear staining and the mRuby labeling. D Representative images of DAPI nuclear labeling (left) and axonal and retrograd neuronal mRuby expression in the auditory cortex (Actx) from the same mouse shown in panels B and C. The right panel shows a zoomed-in image of the merge of the nuclear staining and the mRuby labeling. E Representative images of DAPI nuclear labeling (left) and anterograde transsynaptically GFP labeled neurons (middle). Glial fibrillary acidic protein (GFAP) expressing cells in magenta and a merge between the previous panels on the three images of an ipsilateral amygdala from a mouse injected with scAAV1.short.CAG.GFP in the MGn (n=4). The images show the lack of colocalization between the transsynaptically labeled GFP+ neurons and the GFAP+ cells in the amygdala.
Visualization for Trust in Machine Learning Revisited: The State of the Field in 2023
Creators: name: Chatzimparmpas, Angelos
name: Kucher, Kostiantyn
name: Kerren, Andreas
Publisher: name: arXiv
Year: 2024
Subjects: subject: Human-Computer Interaction (cs.HC)
subject: Machine Learning (cs.LG)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: Visualization for explainable and trustworthy machine learning remains one of the most important and heavily researched fields within information visualization and visual analytics with various application domains, such as medicine, finance, and bioinformatics. After our 2020 state-of-the-art report comprising 200 techniques, we have persistently collected peer-reviewed articles describing visualization techniques, categorized them based on the previously established categorization schema consisting of 119 categories, and provided the resulting collection of 542 techniques in an online survey browser. In this survey article, we present the updated findings of new analyses of this dataset as of fall 2023 and discuss trends, insights, and eight open challenges for using visualizations in machine learning. Our results corroborate the rapidly growing trend of visualization techniques for increasing trust in machine learning models in the past three years, with visualization found to help improve popular model explainability methods and check new deep learning architectures, for instance.
description: This manuscript is accepted for publication in the IEEE Computer Graphics and Applications Journal (IEEE CG&A)
sj-docx-1-sgo-10.1177_21582440231204682 – Supplemental material for The Athletic Religious Faith Scale: Part II—Development and Initial Validation
Creators: name: Noh, Young-Eun
name: Zaki, Fariz
name: Teo, Eng Wah
name: Danaee, Mahmoud
Publisher: name: SAGE Journals
Year: 2023
Subjects: subject: Communication and Media Studies not elsewhere classified
subject: Criminology not elsewhere classified
subject: Education
subject: Psychology not elsewhere classified
subject: Sociology
subject: FOS: Sociology

description: Supplemental material, sj-docx-1-sgo-10.1177_21582440231204682 for The Athletic Religious Faith Scale: Part II—Development and Initial Validation by Young-Eun Noh, Fariz Zaki, Eng Wah Teo and Mahmoud Danaee in SAGE Open
sj-docx-1-bds-10.1177_20539517231206810 - Supplemental material for The affordances of extreme speech
Creators: name: de Keulenaar, Emillie
Publisher: name: SAGE Journals
Year: 2023
Subjects: subject: Communication and Media Studies not elsewhere classified
subject: Cultural Studies not elsewhere classified
subject: Sociology
subject: FOS: Sociology

description: Supplemental material, sj-docx-1-bds-10.1177_20539517231206810 for The affordances of extreme speech by Emillie de Keulenaar in Big Data & Society
Supplemental Material - Public preferences for social investment versus compensation policies in Social Europe
Creators: name: Eick, Gianna M
name: Burgoon, Brian
name: Busemeyer, Marius R
Publisher: name: SAGE Journals
Year: 2023
Subjects: International Relations
Social Policy

description: Supplemental Material for Public preferences for social investment versus compensation policies in Social Europe by Gianna M Eick, Gianna M Eick, and Marius R Busemeyer in Journal of European Social Policy