cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Cratichneumon flavifrons
Creators: name: Varga, Oleksandr
name: Riedel, Matthias
name: Diller, Erich
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Ichneumonidae
Cratichneumon
Cratichneumon flavifrons

description: Cratichneumon flavifrons (Schrank, 1781) (Fig. 13)
Material examined. UKRAINE: Ivano-Frankivsk Reg.: 1 ♀, Bogorodchany Distr., Dibrova, 5 km SW of Bogorodchany, 48.772054 N, 24.511657 E, 310 m, oak forest, sweeping, 26.ix.2010; 2 ♂, idem, sweeping, 16.ix.2011; 1 ♂, idem, sweeping, 8.x.2013; 2 ♀, Mochary, 5 km NE of Bogorodchany, 48.837078 N, 24.581379 E, 315 m, mixed forest, sweeping, 31.v.2011; 1 ♂, idem, sweeping, 18–19.v.2012; 1 ♂, Zhbyr, 8 km SW of Bogorodchany, 48.777922 N, 24.456837 E, 405 m, mixed forest, yellow pan trap, 20–25.v.2013; 1 ♀, Gorgany, m. Igrovets, 7 km SW of Stara Guta, 48.598571 N, 24.130344 E, 1375 m, border between coniferous forest and subalpine zone, Malaise trap, 24.v–13.vi.2014; 2 ♂, Gorgany, 4 km SW of Stara Guta, 48.614163 N, 24.157944 E, 1050 m, coniferous forest, sweeping, 13.vi.2014. Transcarpathian Reg.: 1 ♂, Rakhiv Distr., Chornogora, Sheshul 6–7 km NE of Kvasy, 48.157193 N, 24.363658 E, 1450 m, subalpine zone, sweeping, 16–18.vi.2012; 2 ♂, Tyachiv Distr., 6.5 km N of Mala Ugolka, 48.259464 N, 23.619672 E, 600 m, beech forest, Malaise trap, 17.vii–16.viii.2013, leg. O. Varga (MRPC, SIZK, ZSM).
Distribution. Palaearctic; new record for Ukraine.
description: Published as part of Varga, Oleksandr, Riedel, Matthias & Diller, Erich, 2020, A pilot study of the Carpathian ichneumonine parasitoids (Hymenopera, Ichneumonidae: Ichneumoninae) reveals eighty-eight new records for Ukraine, pp. 1-89 in Zootaxa 4836 (1) on pages 16-19, DOI: 10.11646/zootaxa.4836.1.1, http://zenodo.org/record/4403157
MOESM5 of Histone peptide microarray screen of chromo and Tudor domains defines new histone lysine methylation interactions
Creators: name: Shanle, Erin
name: Shinsky, Stephen
name: Bridgers, Joseph
name: Narkhyun Bae
name: Sagum, Cari
name: Krajewski, Krzysztof
name: Rothbart, Scott
name: Bedford, Mark
name: Strahl, Brian
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Additional file 5: Figure S3. CHD1 chromodomain histone peptide microarray. A) Representative array images of CHD1 chromodomain showing peptide binding indicated in red (right panel). The peptide tracer is shown in green (left panel). Positive antibody controls are outlined in white. B) Scatter plot of the relative binding of CHD1 chromodomain from two independent peptide arrays. All modified and unmodified H4 (1â  23) peptides are shown in blue, and H3K4me2/3-containing peptides are shown in red. All other peptides are shown in black. C) Relative binding to the indicated histone peptides from two representative arrays. Data were normalized to the most intense binding and the average and standard deviation of triplicate spots is shown.
Agrococcus citreus Wieser et al. 1999
Creators: name: Kim, Mi-Sun
name: Kim, Seung-Bum
name: Cha, Chang-Jun
name: Im, Wan-Taek
name: Kim, Won-Yong
name: Kim, Myung-Kyum
name: Jeon, Che-Ok
name: Yi, Hana
name: Yoon, Jung-Hoon
name: Seong, Hyung-Rak Kim and Chi-Nam
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Bacteria
Actinobacteria
Actinobacteridae
Actinomycetales
Microbacteriaceae
Agrococcus
Agrococcus citreus

description: Description of Agrococcus citreus 19D1A19
Cells are aerobic, Gram­staining­positive, non­flagellated and ovoid or short rod shaped. Colonies are circular, convex, glistening and yellow colored after incubation for 4 days on MH agar at 30℃. In the API 20NE system, positive reaction for esculin hydrolysis and β-galactosidase activity. In the API 20NE system, negative reaction for nitrate reduction, indole production, glucose fermentation, arginine dihydrolase, urease activity, gelatin hydrolysis, oxidase activity and utilization of D-glucose, L-arabinose, D­mannose, D­mannitol, N ­acetyl­glucosamine, D­maltose, potassium gluconate, capric acid, adipic acid, malic acid, trisodium citrate and phenylacetic acid. Strain 19D1A19 (= NIBRBAC000503254) was isolated from soil around the Dong River, Gangwon Province, Korea (37°22′56.8″N 128°40′01.2″E).
description: Published as part of Kim, Mi-Sun, Kim, Seung-Bum, Cha, Chang-Jun, Im, Wan-Taek, Kim, Won-Yong, Kim, Myung-Kyum, Jeon, Che-Ok, Yi, Hana, Yoon, Jung-Hoon & Seong, Hyung-Rak Kim and Chi-Nam, 2021, Description of unrecorded bacterial species belonging to the phylum Actinobacteria in Korea, pp. 23-45 in Journal of Species Research 10 (1) on page 33, DOI: 10.12651/JSR.2021.10.1.023, http://zenodo.org/record/12753239
MOESM5 of Histone peptide microarray screen of chromo and Tudor domains defines new histone lysine methylation interactions
Creators: name: Shanle, Erin
name: Shinsky, Stephen
name: Bridgers, Joseph
name: Narkhyun Bae
name: Sagum, Cari
name: Krajewski, Krzysztof
name: Rothbart, Scott
name: Bedford, Mark
name: Strahl, Brian
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology
subject: Computational Biology

description: Additional file 5: Figure S3. CHD1 chromodomain histone peptide microarray. A) Representative array images of CHD1 chromodomain showing peptide binding indicated in red (right panel). The peptide tracer is shown in green (left panel). Positive antibody controls are outlined in white. B) Scatter plot of the relative binding of CHD1 chromodomain from two independent peptide arrays. All modified and unmodified H4 (1â  23) peptides are shown in blue, and H3K4me2/3-containing peptides are shown in red. All other peptides are shown in black. C) Relative binding to the indicated histone peptides from two representative arrays. Data were normalized to the most intense binding and the average and standard deviation of triplicate spots is shown.
Janusius annulatus Kang & Lee 2005, comb. nov.
Creators: name: Dányi, László
name: Park, Kyung-Hwa
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Entognatha
Collembola
Sminthuridae
Janusius
Janusius annulatus

description: Janusius annulatus (Kang & Lee, 2005) comb. nov.
Sminthurus annulatus Kang & Lee, 2005 in: Kang et al. 2005, p: 238.
Sminthurus annulatus Kang & Lee, 2005 described from South Korea shows the distingushing characters of Janusius: has strong seta-like anal appendage and spatulate tibiotarsal chaetae. This species is considered here as member of the genus Janusius Bretfeld, 2010
description: Published as part of Dányi, László & Park, Kyung-Hwa, 2016, A new species of Janusius Bretfeld, 2010 (Collembola, Sminthuridae) from the Korean Peninsula, with a key to the species of the genus, pp. 574-580 in Zootaxa 4154 (5) on page 575, DOI: 10.11646/zootaxa.4154.5.6, http://zenodo.org/record/261969
Additional file 1: Table S1. of Prevalence of plant beneficial and human pathogenic bacteria isolated from salad vegetables in India
Creators: name: Angamuthu Nithya
name: Babu, Subramanian
Publisher: name: Figshare
Year: 2017
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology

description: (a). Morphological and biochemical characterization of bacterial isolates from carrot. (b). Morphological and biochemical characterization of bacterial isolates from cucumber. (c). Morphological and biochemical characterization of bacterial isolates from onion. (d). Morphological and biochemical characterization of bacterial isolates from tomato. (DOC 233 kb)
Hoplismenus krapinesis
Creators: name: Varga, Oleksandr
name: Riedel, Matthias
name: Diller, Erich
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Ichneumonidae
Hoplismenus
Hoplismenus krapinesis

description: Hoplismenus krapinesis (Hensch, 1928)
Material examined. UKRAINE: Ivano-Frankivsk Reg.: 1 ♂, Bogorodchany Distr., Mochary, 5 km NE of Bogorodchany, 48.837078 N, 24.581379 E, 315 m, mixed forest, Malaise trap, 4–14.vii.2014, leg. O. Varga (SIZK).
Distribtion. Central and Southern Europe; new record for Ukraine.
description: Published as part of Varga, Oleksandr, Riedel, Matthias & Diller, Erich, 2020, A pilot study of the Carpathian ichneumonine parasitoids (Hymenopera, Ichneumonidae: Ichneumoninae) reveals eighty-eight new records for Ukraine, pp. 1-89 in Zootaxa 4836 (1) on page 30, DOI: 10.11646/zootaxa.4836.1.1, http://zenodo.org/record/4403157
Additional file 1: Table S1. of Prevalence of plant beneficial and human pathogenic bacteria isolated from salad vegetables in India
Creators: name: Angamuthu Nithya
name: Babu, Subramanian
Publisher: name: Figshare
Year: 2017
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Virology

description: (a). Morphological and biochemical characterization of bacterial isolates from carrot. (b). Morphological and biochemical characterization of bacterial isolates from cucumber. (c). Morphological and biochemical characterization of bacterial isolates from onion. (d). Morphological and biochemical characterization of bacterial isolates from tomato. (DOC 233 kb)
Agrococcus versicolor Behrendt et al. 2008
Creators: name: Kim, Mi-Sun
name: Kim, Seung-Bum
name: Cha, Chang-Jun
name: Im, Wan-Taek
name: Kim, Won-Yong
name: Kim, Myung-Kyum
name: Jeon, Che-Ok
name: Yi, Hana
name: Yoon, Jung-Hoon
name: Seong, Hyung-Rak Kim and Chi-Nam
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Bacteria
Actinobacteria
Actinobacteridae
Actinomycetales
Microbacteriaceae
Agrococcus
Agrococcus versicolor

description: Description of Agrococcus versicolor 19D1A72
Cells are aerobic, Gram­staining­positive, non­flagellated and ovoid or short rod shaped. Colonies are circular, convex, glistening and orange colored after incubation for 4 days on MH agar at 30℃. In the API 20NE system, positive reaction for hydrolysis of esculin and gelatin and β-galactosidase activity. In the API 20NE system, negative reaction for nitrate reduction, indole production, glucose fermentation, arginine dihydrolase, urease activity, oxidase activity and utilization of D-glucose, L-arabinose, D-mannose, D­mannitol, N ­acetyl­glucosamine, D­maltose, potassium gluconate, capric acid, adipic acid, malic acid, trisodium citrate and phenylacetic acid. Strain 19D1A72 (= NIBRBAC000503256) was isolated from soil around the Dong River, Gangwon Province, Korea (37°22′56.8″N 128°40′01.2″E).
description: Published as part of Kim, Mi-Sun, Kim, Seung-Bum, Cha, Chang-Jun, Im, Wan-Taek, Kim, Won-Yong, Kim, Myung-Kyum, Jeon, Che-Ok, Yi, Hana, Yoon, Jung-Hoon & Seong, Hyung-Rak Kim and Chi-Nam, 2021, Description of unrecorded bacterial species belonging to the phylum Actinobacteria in Korea, pp. 23-45 in Journal of Species Research 10 (1) on page 33, DOI: 10.12651/JSR.2021.10.1.023, http://zenodo.org/record/12753239
Agromyces fucosus Zgurskaya et al. 1992
Creators: name: Kim, Mi-Sun
name: Kim, Seung-Bum
name: Cha, Chang-Jun
name: Im, Wan-Taek
name: Kim, Won-Yong
name: Kim, Myung-Kyum
name: Jeon, Che-Ok
name: Yi, Hana
name: Yoon, Jung-Hoon
name: Seong, Hyung-Rak Kim and Chi-Nam
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Bacteria
Actinobacteria
Actinobacteridae
Actinomycetales
Microbacteriaceae
Agromyces
Agromyces fucosus

description: Description of Agromyces fucosus G36
Cells are aerobic, Gram-staining-positive, non-flagellated and rod shaped. Colonies are entire, convex and yellow colored after incubation for 3 days on R2 A agar at 25℃. In the API 20NE system, positive reaction for hydrolysis of esculin and utilization of L-arabinose, D-mannitol, N ­acetyl­glucosamine and phenylacetic acid. In the API 20NE system, negative reaction for nitrate reduction, indole production, glucose fermentation, arginine dihydrolase, urease activity, hydrolysis of gelatin, β-galactosidase activity, oxidase activity and utilization of D-glucose, D-mannose, D­maltose, potassium gluconate, capric acid, adipic acid, malic acid and trisodium citrate. Strain G36 (= NIBR BAC000503404) was isolated from ginseng­cultivated soil in Yeongju, Gyeongsangbuk Province, Korea (36°53′51.5″ N 128°28′02.3″E).
description: Published as part of Kim, Mi-Sun, Kim, Seung-Bum, Cha, Chang-Jun, Im, Wan-Taek, Kim, Won-Yong, Kim, Myung-Kyum, Jeon, Che-Ok, Yi, Hana, Yoon, Jung-Hoon & Seong, Hyung-Rak Kim and Chi-Nam, 2021, Description of unrecorded bacterial species belonging to the phylum Actinobacteria in Korea, pp. 23-45 in Journal of Species Research 10 (1) on page 33, DOI: 10.12651/JSR.2021.10.1.023, http://zenodo.org/record/12753239
Additional file 1: Table S1. of Immune recognition of salivary proteins from the cattle tick Rhipicephalus microplus differs according to the genotype of the bovine host
Creators: name: Garcia, Gustavo
name: Maruyama, Sandra
name: Nelson, Kristina
name: JosĂŠ Ribeiro
name: Luiz Gardinassi
name: Maia, Antonio
name: Ferreira, Beatriz
name: Kooyman, Frans
name: Santos, Isabel De Miranda
Publisher: name: Figshare
Year: 2017
Subjects: subject: Ecology
subject: FOS: Biological sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics

description: Sera used in ELISA and proteome analyses. (DOCX 39Â kb)
Ichneumon amphibolus Kriechbaumer 1888
Creators: name: Varga, Oleksandr
name: Riedel, Matthias
name: Diller, Erich
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Eulophidae
Ichneumon
Ichneumon amphibolus

description: Ichneumon amphibolus Kriechbaumer, 1888
Material examined. UKRAINE: Ivano-Frankivsk Reg.: 1 ♂, Bogorodchany Distr., Zhbyr, 8 km SW of Bogorodchany, 48.777922 N, 24.456837 E, 405 m, mixed forest, yellow pan trap, 13–16.v.2013, leg. O. Varga (SIZK).
Distribution. Western Palaearctic; new record for Ukraine.
description: Published as part of Varga, Oleksandr, Riedel, Matthias & Diller, Erich, 2020, A pilot study of the Carpathian ichneumonine parasitoids (Hymenopera, Ichneumonidae: Ichneumoninae) reveals eighty-eight new records for Ukraine, pp. 1-89 in Zootaxa 4836 (1) on page 30, DOI: 10.11646/zootaxa.4836.1.1, http://zenodo.org/record/4403157
Additional file 1: of Urban Health Extension Services Utilization in Bishoftu Town, Oromia Regional State, Central Ethiopia
Creators: name: Ewunetu Gebreegziabher
name: Feleke Astawesegn
name: Antehun Anjulo
name: Mirkuzie Kerie
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: English version Questionnaire. A. Household Survey questionnaire. Part I: Socio-demographic and socioeconomic data. Part II: General health care utilization/and preference. PART IV: Coverage and utilization of UHEPs. PART V: General satisfaction. B. Topic Guide Focus group discussion English version. For Health Extension Professionals. For health committee members. For community members. C Topic Guide for key informants. For Urban health extension professionals. For Health Extension Supervisors. For health centre managers. For town health department. For kebele administrative head. (DOCX 60 kb)
Agromyces mangrovi Wang et al. 2019
Creators: name: Kim, Mi-Sun
name: Kim, Seung-Bum
name: Cha, Chang-Jun
name: Im, Wan-Taek
name: Kim, Won-Yong
name: Kim, Myung-Kyum
name: Jeon, Che-Ok
name: Yi, Hana
name: Yoon, Jung-Hoon
name: Seong, Hyung-Rak Kim and Chi-Nam
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Bacteria
Actinobacteria
Actinobacteridae
Actinomycetales
Microbacteriaceae
Agromyces
Agromyces mangrovi

description: Description of Agromyces mangrovi CAU 1605
Cells are aerobic, Gram­staining­positive, non­flagellated and short rod shaped. Colonies are circular, convex, smooth, shiny, opaque and yellow colored after incubation for 2-3 days on marine agar at 30℃. In the API 20NE system, positive reaction for esculin hydrolysis and β-galactosidase activity. In the API 20NE system, negative reaction for nitrate reduction, indole production, glucose fermentation, arginine dihydrolase, urease activity, gelatin hydrolysis and utilization of D-glucose, L-arabinose, D­mannose, D­mannitol, N ­acetyl­glucosamine, D­maltose, potassium gluconate, capric acid, adipic acid, malic acid, trisodium citrate and phenylacetic acid. Strain CAU 1605 (= NIBRBAC000503252) was isolated from tidal flat sediment in Incheon, Korea (37°32′41.0″N 126°25′ 53.9″E).
description: Published as part of Kim, Mi-Sun, Kim, Seung-Bum, Cha, Chang-Jun, Im, Wan-Taek, Kim, Won-Yong, Kim, Myung-Kyum, Jeon, Che-Ok, Yi, Hana, Yoon, Jung-Hoon & Seong, Hyung-Rak Kim and Chi-Nam, 2021, Description of unrecorded bacterial species belonging to the phylum Actinobacteria in Korea, pp. 23-45 in Journal of Species Research 10 (1) on page 33, DOI: 10.12651/JSR.2021.10.1.023, http://zenodo.org/record/12753239
Ichneumon albiger Wesmael 1845
Creators: name: Varga, Oleksandr
name: Riedel, Matthias
name: Diller, Erich
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Eulophidae
Ichneumon
Ichneumon albiger

description: Ichneumon albiger Wesmael, 1845
Material examined. UKRAINE: Ivano-Frankivsk Reg.: 1 ♀, Nadvirna Distr., Chornogora, Nesamovyte, 25 km SW of Vorokhta, 48.130496 N, 24.538212 E, 1700 m, subalpine zone, sweeping, 24.viii.2014, leg. O. Varga (SIZK).
Distribution. Palaeacrtic, Ukraine (Rasnitsyn & Siytan 1981).
description: Published as part of Varga, Oleksandr, Riedel, Matthias & Diller, Erich, 2020, A pilot study of the Carpathian ichneumonine parasitoids (Hymenopera, Ichneumonidae: Ichneumoninae) reveals eighty-eight new records for Ukraine, pp. 1-89 in Zootaxa 4836 (1) on page 30, DOI: 10.11646/zootaxa.4836.1.1, http://zenodo.org/record/4403157
Additional file 3: Table S2. of Coinfection outcome in an opportunistic pathogen depends on the inter-strain interactions
Creators: name: Kinnula, Hanna
name: Mappes, Johanna
name: Lotta-Riina Sundberg
Publisher: name: Figshare
Year: 2017
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Pharmacology
subject: Developmental Biology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases
subject: 60506 Virology
subject: Computational Biology

description: The treatment and control groups in Flavobacterium columnare infection experiment. (DOC 70Â kb)
MOESM8 of Histone peptide microarray screen of chromo and Tudor domains defines new histone lysine methylation interactions
Creators: name: Shanle, Erin
name: Shinsky, Stephen
name: Bridgers, Joseph
name: Narkhyun Bae
name: Sagum, Cari
name: Krajewski, Krzysztof
name: Rothbart, Scott
name: Bedford, Mark
name: Strahl, Brian
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Additional file 8: Figure S6. TDRD3 Tudor domain histone peptide microarray. A) Representative array images of TDRD3 Tudor domain showing peptide binding indicated in red (right panel). The peptide tracer is shown in green (left panel).
Ichneumon balteatus Wesmael 1845
Creators: name: Varga, Oleksandr
name: Riedel, Matthias
name: Diller, Erich
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Eulophidae
Ichneumon
Ichneumon balteatus

description: Ichneumon balteatus Wesmael, 1845
Material examined. UKRAINE: Ivano-Frankivsk Reg.: 1 ♀, Nadvirna Distr., Mykulychyn, 600–800 m, coniferous forest, sweeping, 8.vii.2012, leg. O. Varga (SIZK).
Distribution. Palaearctic; Ukraine (Rasnitsyn & Siytan 1981).
description: Published as part of Varga, Oleksandr, Riedel, Matthias & Diller, Erich, 2020, A pilot study of the Carpathian ichneumonine parasitoids (Hymenopera, Ichneumonidae: Ichneumoninae) reveals eighty-eight new records for Ukraine, pp. 1-89 in Zootaxa 4836 (1) on page 31, DOI: 10.11646/zootaxa.4836.1.1, http://zenodo.org/record/4403157
Additional file 3: Table S2. of Coinfection outcome in an opportunistic pathogen depends on the inter-strain interactions
Creators: name: Kinnula, Hanna
name: Mappes, Johanna
name: Lotta-Riina Sundberg
Publisher: name: Figshare
Year: 2017
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Pharmacology
subject: Developmental Biology
subject: Cancer
subject: Mental Health
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology
subject: Computational Biology

description: The treatment and control groups in Flavobacterium columnare infection experiment. (DOC 70Â kb)
Additional file 1: of Genetics and fine mapping of a purple leaf gene, BoPr, in ornamental kale (Brassica oleracea L. var. acephala)
Creators: name: Liu, Xiao-Ping
name: Gao, Bao-Zhen
name: Han, Feng-Qing
name: Fang, Zhi-Yuan
name: Yang, Li-Mei
name: Zhuang, Mu
name: Lv, Hong-Hao
name: Liu, Yu-Mei
name: Li, Zhan-Sheng
name: Cai, Cheng-Cheng
name: Yu, Hai-Long
name: Li, Zhi-Yuan
name: Yang-Yong Zhang
Publisher: name: Figshare
Year: 2017
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Supplementary 1. Sequences of W1827 and P1835. (DOC 29 kb)
Ichneumon bucculentus Wesmael 1845
Creators: name: Varga, Oleksandr
name: Riedel, Matthias
name: Diller, Erich
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Eulophidae
Ichneumon
Ichneumon bucculentus

description: Ichneumon bucculentus Wesmael, 1845
Material examined. UKRAINE: Ivano-Frankivsk Reg.: 1 ♀, Bogorodchany Distr., Mochary, 5 km NE of Bogorodchany, 48.837078 N, 24.581379 E, 315 m, mixed forest, sweeping, 2.viii.2010; 1 ♀, Zhbyr, 8 km SW of Bogorodchany, 48.777922 N, 24.456837 E, 405 m, mixed forest, sweeping, 2.x.2011, leg. O. Varga (SIZK).
Distribution. Holarctic; Ukraine (Rasnitsyn & Siytan 1981).
description: Published as part of Varga, Oleksandr, Riedel, Matthias & Diller, Erich, 2020, A pilot study of the Carpathian ichneumonine parasitoids (Hymenopera, Ichneumonidae: Ichneumoninae) reveals eighty-eight new records for Ukraine, pp. 1-89 in Zootaxa 4836 (1) on page 31, DOI: 10.11646/zootaxa.4836.1.1, http://zenodo.org/record/4403157
MOESM7 of Histone peptide microarray screen of chromo and Tudor domains defines new histone lysine methylation interactions
Creators: name: Shanle, Erin
name: Shinsky, Stephen
name: Bridgers, Joseph
name: Narkhyun Bae
name: Sagum, Cari
name: Krajewski, Krzysztof
name: Rothbart, Scott
name: Bedford, Mark
name: Strahl, Brian
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology
subject: Computational Biology

description: Additional file 7: Figure S5. CHD9 chromodomain histone peptide microarray. A) Representative array images of CHD9 chromodomain showing peptide binding indicated in red (right panel). The peptide tracer is shown in green (left panel). Positive antibody controls are outlined in white. B) Scatter plot of the relative binding of CHD9 chromodomain from two independent peptide arrays. All modified and unmodified H4 (1â  23) peptides are shown in red. All other peptides are shown in black. C) Relative binding to the indicated histone peptides from one representative array. Data were normalized to the most intense binding and the average and standard deviation of triplicate spots is shown.
MOESM8 of Histone peptide microarray screen of chromo and Tudor domains defines new histone lysine methylation interactions
Creators: name: Shanle, Erin
name: Shinsky, Stephen
name: Bridgers, Joseph
name: Narkhyun Bae
name: Sagum, Cari
name: Krajewski, Krzysztof
name: Rothbart, Scott
name: Bedford, Mark
name: Strahl, Brian
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Additional file 8: Figure S6. TDRD3 Tudor domain histone peptide microarray. A) Representative array images of TDRD3 Tudor domain showing peptide binding indicated in red (right panel). The peptide tracer is shown in green (left panel).
Ichneumon cessator Muller 1776
Creators: name: Varga, Oleksandr
name: Riedel, Matthias
name: Diller, Erich
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Eulophidae
Ichneumon
Ichneumon cessator

description: Ichneumon cessator Müller, 1776
Material examined. UKRAINE: Ivano-Frankivsk Reg.: 1 ♀, Bogorodchany Distr., Gorgany, 11–12 km SW of Stara Guta, 1250–1300 m, coniferous forest, sweeping, 17–19.viii.2011; 1 ♀, Mochary, 5 km NE of Bogorodchany, 48.837078 N, 24.581379 E, 315 m, mixed forest, sweeping, 14.v.2013; 1 ♀, Gorgany, m. Igrovets, 7 km SW of Stara Guta, 48.598571 N, 24.130344 E, 1375 m, border between coniferous forest and subalpine zone, Malaise trap, 2–20.vii.2014; 1 ♀, idem, Malaise trap, 20.vii–8.viii.2014; 4 ♀, idem, Malaise trap, 8–28.viii.2014, leg. O. Varga (MRPC, SIZK, ZSM).
Distribution. Palaearctic; Ukraine (Rasnitsyn & Siytan 1981).
description: Published as part of Varga, Oleksandr, Riedel, Matthias & Diller, Erich, 2020, A pilot study of the Carpathian ichneumonine parasitoids (Hymenopera, Ichneumonidae: Ichneumoninae) reveals eighty-eight new records for Ukraine, pp. 1-89 in Zootaxa 4836 (1) on page 31, DOI: 10.11646/zootaxa.4836.1.1, http://zenodo.org/record/4403157
Additional file 1: of Genetics and fine mapping of a purple leaf gene, BoPr, in ornamental kale (Brassica oleracea L. var. acephala)
Creators: name: Liu, Xiao-Ping
name: Gao, Bao-Zhen
name: Han, Feng-Qing
name: Fang, Zhi-Yuan
name: Yang, Li-Mei
name: Zhuang, Mu
name: Lv, Hong-Hao
name: Liu, Yu-Mei
name: Li, Zhan-Sheng
name: Cai, Cheng-Cheng
name: Yu, Hai-Long
name: Li, Zhi-Yuan
name: Yang-Yong Zhang
Publisher: name: Figshare
Year: 2017
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Supplementary 1. Sequences of W1827 and P1835. (DOC 29 kb)
Taranucnus bihari
Creators: name: Gnelitsa, Valery A.
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Linyphiidae
Taranucnus
Taranucnus bihari

description: Taranucnus cf. bihari
(Figs 26–33)
Material: 4♀, Synevir National Nature Park, Zakarpatskaya Region, Ukraine, North slope of Negrovets Mt., 48°30’35.01”N 23°40’37.59”E, sparse growth of spruce, bed of stones, in hollows between stones, 19.VIII.2004, Gnelitsa leg. (VGC); 4♀, Negrovets Mt., 48°30’08.25”N 23°42’15.62”E, stony debris with Pinus mugho, Vaccinium myrtillus and moss, in hollows under stones, 25.VIII.2004, Gnelitsa leg. (VGC); ♀, Dolyshny Shepot village, Vizhnitsa District, Chernovtsy Regin, 47°59’59.60”N 25°16’20.55”E, moist place, Picea, Salix, Acer with Caltha and Marchantia, in moss and detritus, 18.VII.2001, Gnelitsa leg. (VGC).
The females of Taranucnus cf. bihari (male is unknown) differ from both T. bihari and T. carpaticus n. sp. by the epigynum which have neither a cut nor a “mucrone” on the margin of the anterior wall of its cavity (Figs 26–27, 30–31) as well as by the vulva receptacles, which are noticeably not so massive (Figs. 29, 33) than of T. carpaticus n. sp. (Fig 21).
T. bihari in North Romania is known by a single male specimen (Weiss 1978). At the present time there is not enough evidence to regard the females of T. cf. bihari as those that are closely linked to this male.
The special habitat conditions (Rozwałka 2010, 2012) lead to fragmentation of the habitat area and facilitate the possible appearance of subspecies in T. bihari or the new species even within the limits of the Ukrainian part of the Carpathians. So I expect the morphological differences of the spiders from the remote North Romanian (Weiss 1978) and West Romanian (Fage 1931, Denis 1952) distribution areas (Fig. 34). The question remains whether the described male from North Romania is similar to the male from T. bihari type locality (unknown so far).
description: Published as part of Gnelitsa, Valery A., 2016, A new species of the spider genus Taranucnus from Ukraine (Araneae, Linyphiidae), pp. 87-93 in Zootaxa 4103 (1) on pages 91-93, DOI: 10.11646/zootaxa.4103.1.11, http://zenodo.org/record/271135
Macrosiphum rosae
Creators: name: Stekolshchikov, Andrey V.
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Aphididae
Macrosiphum
Macrosiphum rosae

description: Macrosiphum rosae (Linnaeus, 1758)
Published information. Without location data, on Rosa sp. (Bozhko 1983). Rosa sp. (Astarkhanov et al 2016).
Material. KNZ: 27.ix.2023, Rosa sp., on bug, apt. TTG: 5.ix.2023, Scabiosa owerinii Boiss., on stem near flowers, apt. and al. TTS: 2.ix.2023, Valeriana alliariifolia var. tiliifolia (Troickij) V.E.Avet., on rays of umbrella, apt.; 4.ix.2023, Cephalaria gigantea (Ledeb.) Bobrov, at top of stem, apt. and al.
description: Published as part of Stekolshchikov, Andrey V., 2024, A contribution to the aphid fauna (Homoptera, Aphidinea) of the Republic of Dagestan (the Russian Federation), with descriptions of three new species, redescription of Macrosiphum pulcherimum Nevsky, 1928, and descriptions of previously unknown morphs of three species, pp. 1-68 in Zootaxa 5545 (1) on page 57, DOI: 10.11646/zootaxa.5545.1.1, http://zenodo.org/record/14387282
Ichneumon caedator Gravenhorst 1829
Creators: name: Varga, Oleksandr
name: Riedel, Matthias
name: Diller, Erich
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Eulophidae
Ichneumon
Ichneumon caedator

description: Ichneumon caedator Gravenhorst, 1829
Material examined. UKRAINE: Ivano-Frankivsk Reg.: 1 ♀, Bogorodchany Distr., Mochary, 5 km NE of Bogorodchany, 48.837078 N, 24.581379 E, 315 m, mixed forest, under bark of Quercus robur L., 10.iii.2012, leg. O. Varga (SIZK).
Distribution. Palaearctic; Ukraine (Rasnitsyn & Siytan 1981).
description: Published as part of Varga, Oleksandr, Riedel, Matthias & Diller, Erich, 2020, A pilot study of the Carpathian ichneumonine parasitoids (Hymenopera, Ichneumonidae: Ichneumoninae) reveals eighty-eight new records for Ukraine, pp. 1-89 in Zootaxa 4836 (1) on page 31, DOI: 10.11646/zootaxa.4836.1.1, http://zenodo.org/record/4403157
Additional file 2: Table S2. of Immune recognition of salivary proteins from the cattle tick Rhipicephalus microplus differs according to the genotype of the bovine host
Creators: name: Garcia, Gustavo
name: Maruyama, Sandra
name: Nelson, Kristina
name: JosĂŠ Ribeiro
name: Luiz Gardinassi
name: Maia, Antonio
name: Ferreira, Beatriz
name: Kooyman, Frans
name: Santos, Isabel De Miranda
Publisher: name: Figshare
Year: 2017
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology

description: Identification of all spots recovered and sequenced from immunoblotting analyses using two-dimensional gel electrophoresis. (DOCX 57Â kb)
Additional file 2: Table S1. of Genetics and fine mapping of a purple leaf gene, BoPr, in ornamental kale (Brassica oleracea L. var. acephala)
Creators: name: Liu, Xiao-Ping
name: Gao, Bao-Zhen
name: Han, Feng-Qing
name: Fang, Zhi-Yuan
name: Yang, Li-Mei
name: Zhuang, Mu
name: Lv, Hong-Hao
name: Liu, Yu-Mei
name: Li, Zhan-Sheng
name: Cai, Cheng-Cheng
name: Yu, Hai-Long
name: Li, Zhi-Yuan
name: Yang-Yong Zhang
Publisher: name: Figshare
Year: 2017
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: The recombination rate of markers far away from the candidate gene in the F2 and BC1P1 population. (DOCX 13 kb)
Arbacia Gray 1835
Creators: name: Courville, Erwan
name: Poulin, Elie
name: Saucede, Thomas
name: Mooi, Rich
name: Lessios, Harilaos
name: Salinas, Andrea Martínez
name: Diaz, Angie
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Echinodermata
Echinoidea
Arbacioida
Arbaciidae
Arbacia

description: Genus Arbacia Gray, 1835
Type species. Arbacia lixula (Linné, 1758). Extant species with a wide distribution across the Atlantic Ocean, including the Brazilian coast, the Gulf of Guinea, the Azores, the East Atlantic Islands, and the Mediterranean Sea. The genus is also known from the Pleistocene of Madeira, Azores, and Italy (Madeira et al. 2011; Stefanini 1911).
Emended diagnosis. Arbaciidae with ocular plates bearing small tubercle, usually resorbed during ontogeny; periproct slightly elongated in direction 1-IV and covered with four supra-anal plates; ocular pores double, not visible externally; peristome large (> 30% TD), the ambulacra protruding so as to form “ambulacral lips”; buccal notches shallow and wide; tags narrow, more or less elongated; oral primary spines with a cortex-layer “shoe” or “cap”; the ambital and upper spines without any cortex-layer; sphaeridia single, in a small pit close to the peristomial edge; epistroma conspicuously developed and may be of a characteristic design, forming randomly distributed punctation, or arranged in horizontal or vertical series.
description: Published as part of Courville, Erwan, Poulin, Elie, Saucede, Thomas, Mooi, Rich, Lessios, Harilaos, Salinas, Andrea Martínez & Diaz, Angie, 2023, Taxonomic reassessment of Tetrapygus niger (Arbacioida, Echinoidea): molecular and morphological evidence support its placement in Arbacia, pp. 249-261 in Zootaxa 5375 (2) on page 254, DOI: 10.11646/zootaxa.5375.2.6, http://zenodo.org/record/10184302
Ichneumon confusor Gravenhorst 1820
Creators: name: Varga, Oleksandr
name: Riedel, Matthias
name: Diller, Erich
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Eulophidae
Ichneumon
Ichneumon confusor

description: Ichneumon confusor Gravenhorst, 1820
Material examined. UKRAINE: Ivano-Frankivsk Reg.: 1 ♀, Bogorodchany Distr., Mochary, 5 km NE of Bogorodchany, 48.837078 N, 24.581379 E, 315 m, mixed forest, sweeping, 28.vii.2009; 7 ♀, idem, under bark of Quercus robur L., 10.iii.2012; 1 ♀, Zhbyr, 8 km SW of Bogorodchany, 48.777922 N, 24.456837 E, 405 m, mixed forest, sweeping, 13.ix.2011, leg. O. Varga (MRPC, SIZK, ZSM).
Distribution. Palaearctic; Ukraine (Rasnitsyn & Siytan 1981).
description: Published as part of Varga, Oleksandr, Riedel, Matthias & Diller, Erich, 2020, A pilot study of the Carpathian ichneumonine parasitoids (Hymenopera, Ichneumonidae: Ichneumoninae) reveals eighty-eight new records for Ukraine, pp. 1-89 in Zootaxa 4836 (1) on page 31, DOI: 10.11646/zootaxa.4836.1.1, http://zenodo.org/record/4403157
Ichneumon deliratorius Linnaeus 1758
Creators: name: Varga, Oleksandr
name: Riedel, Matthias
name: Diller, Erich
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Eulophidae
Ichneumon
Ichneumon deliratorius

description: Ichneumon deliratorius Linnaeus, 1758
Material examined. UKRAINE: Ivano-Frankivsk Reg.: 1 ♀, Bogorodchany Distr., Mochary, 5 km NE of Bogorodchany, 48.837078 N, 24.581379 E, 315 m, mixed forest, sweeping, 3.ix.2011. Transcarpathian Reg.: 1 ♂, Rakhiv Distr., Chornogora, Sheshul 6–7 km NE of Kvasy, 48.157193 N, 24.363658 E, 1450 m, subalpine zone, sweeping, 15.vi.2013, leg. O. Varga (SIZK).
Distribution. Holarctic; Ukraine (as Coelichneumon in: Rasnitsyn & Siytan 1981).
description: Published as part of Varga, Oleksandr, Riedel, Matthias & Diller, Erich, 2020, A pilot study of the Carpathian ichneumonine parasitoids (Hymenopera, Ichneumonidae: Ichneumoninae) reveals eighty-eight new records for Ukraine, pp. 1-89 in Zootaxa 4836 (1) on page 31, DOI: 10.11646/zootaxa.4836.1.1, http://zenodo.org/record/4403157
Ichneumon erythromerus Wesmael 1857
Creators: name: Varga, Oleksandr
name: Riedel, Matthias
name: Diller, Erich
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Eulophidae
Ichneumon
Ichneumon erythromerus

description: Ichneumon erythromerus Wesmael, 1857 (Fig. 21A)
Material examined. UKRAINE: Ivano-Frankivsk Reg.: 1 ♀, Bogorodchany Distr., Mochary, 5 km NE of Bogorodchany, 48.837078 N, 24.581379 E, 315 m, mixed forest, sweeping, 16.ix.2009, leg. O. Varga (SIZK).
Distribution. Western Palaearctic; new record for Ukraine.
description: Published as part of Varga, Oleksandr, Riedel, Matthias & Diller, Erich, 2020, A pilot study of the Carpathian ichneumonine parasitoids (Hymenopera, Ichneumonidae: Ichneumoninae) reveals eighty-eight new records for Ukraine, pp. 1-89 in Zootaxa 4836 (1) on page 34, DOI: 10.11646/zootaxa.4836.1.1, http://zenodo.org/record/4403157
Ichneumon diversor Wesmael 1855
Creators: name: Varga, Oleksandr
name: Riedel, Matthias
name: Diller, Erich
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Eulophidae
Ichneumon
Ichneumon diversor

description: Ichneumon diversor Wesmael, 1855 (Fig. 21B)
Material examined. UKRAINE: Transcarpathian Reg.: 1 ♂, Rakhiv Distr., Marmarosy, 11–12 km SE of Dilove, 47.925407 N, 24.311800 E, 1550 m, subalpine zone, m. Pip-Ivan, sweeping, 29.vii.2013, leg. O. Varga (SIZK).
Distribution. Western Palaearctic; new record for Ukraine.
description: Published as part of Varga, Oleksandr, Riedel, Matthias & Diller, Erich, 2020, A pilot study of the Carpathian ichneumonine parasitoids (Hymenopera, Ichneumonidae: Ichneumoninae) reveals eighty-eight new records for Ukraine, pp. 1-89 in Zootaxa 4836 (1) on page 31, DOI: 10.11646/zootaxa.4836.1.1, http://zenodo.org/record/4403157
Landmarks based human-like guidance for driving navigation in an urban environment
Creators: name: Wang, B
name: Stafford-Fraser, Q
name: Robinson, P
name: Dias, E
name: Skrypchuk, L
Publisher: name: IEEE
Year: 2017
Subjects: 4007 Control Engineering, Mechatronics and Robotics
40 Engineering

description: © 2017 IEEE. Driving is a cognitively demanding task, and many current navigation systems present confusing guidance instructions that add to the distraction. Human navigators, by contrast, schedule their advice to minimise distraction, and phrase instructions in terms of visible landmarks to avoid confusion. In this paper, we present the basis for a 'natural navigation' system which interprets distances as references to landmarks. We use Extended Kalman Filtering to integrate visual odometry with other sensor data in order to obtain precise vehicle motion, then, based on the filtered motion parameters, we characterize recognised visual landmarks as locations on the navigational map. The navigation system can then use references to these landmarks in its driver instructions rather than absolute distances. Experimental results show that landmarks can be located on the navigational map with sufficient accuracy using normal vehicle telemetry and a dashboard camera.
Additional file 3: of Genetic diversity of a New Zealand multi-breed sheep population and composite breedsâ   history revealed by a high-density SNP chip
Creators: name: Luiz Brito
name: McEwan, John
name: Miller, Stephen
name: Pickering, Natalie
name: Bain, Wendy
name: Dodds, Ken
name: FlĂĄvio Schenkel
name: Clarke, Shannon
Publisher: name: Figshare
Year: 2017
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Virology

description: Ancestral and recent effective population size. (DOCX 17Â kb)
Additional file 6: Figure S3. of Determining Clostridium difficile intra-taxa diversity by mining multilocus sequence typing databases
Creators: name: Muñoz, Marina
name: Ríos-Chaparro, Dora
name: Patarroyo, Manuel
name: Ramírez, Juan
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Hematology

description: BURST groups “BG” (n: 14) and STs singleton (n: 24) identified through BURST analysis. (PDF 322 kb)
Minimum variance beamformers for coherent plane-wave compounding
Creators: name: Nguyen, NQ
name: Prager, RW
Publisher: name: SPIE
Year: 2017
Subjects: Coherent plane-wave compounding
minimum variance
adaptive beamforming
acoustic reciprocity
spatial correlation
image quality

description: In this paper we present and analyse a technique for applying minimum variance distortionless response (MVDR) beamforming to a coherent plane-wave compounding (CPWC) acquisition system. In the past, this has been done using a spatial smoothing approach that reduces the eﬀective size of the receive aperture and degrades the image resolution. In this paper, we apply the MVDR algorithms in a novel way to the acquired data from the individual transducer elements, before any summation or other compounding. This enables us to propose a new approach for estimation of the covariance matrix that decorrelates the coherence among the components at all the diﬀerent acquisition angles. This results in a new approach to receive beamforming for CPWC acquisition. The new beamformer is demonstrated on imaging data acquired with a research scanner. We find the new beamformer oﬀers substantial improvements over the DAS method. It also significantly outperforms the previously published MVDR/CPWC beamformer on phantom studies where the signal from the main target is dominated by noise and interference. These improvements motivate further study in this new approach for enhancing image quality.
Ichneumon formosus Gravenhorst 1829
Creators: name: Varga, Oleksandr
name: Riedel, Matthias
name: Diller, Erich
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Eulophidae
Ichneumon
Ichneumon formosus

description: Ichneumon formosus Gravenhorst, 1829 (Fig. 22A)
Material examined. UKRAINE: Ivano-Frankivsk Reg.: 1 ♂, Bogorodchany Distr., Gorgany, m. Igrovets, 7.5 km SW of Stara Guta, 48.598571 N, 24.130344 E, 1500 m, subalpine zone, sweeping, 1.vii.2012; 1 ♂, Dibrova, 5 km SW of Bogorodchany, 48.772054 N, 24.511657 E, 310 m, oak forest, sweeping, 2.vi.2013, leg. O. Varga (SIZK).
Distribution. Palaearctic; new record for Ukraine.
description: Published as part of Varga, Oleksandr, Riedel, Matthias & Diller, Erich, 2020, A pilot study of the Carpathian ichneumonine parasitoids (Hymenopera, Ichneumonidae: Ichneumoninae) reveals eighty-eight new records for Ukraine, pp. 1-89 in Zootaxa 4836 (1) on page 34, DOI: 10.11646/zootaxa.4836.1.1, http://zenodo.org/record/4403157
Additional file 1: Table S1. of
                     In vivo characterization of an Hfq protein encoded by the Bacillus anthracis virulence plasmid pXO1
Creators: name: Keefer, Andrea
name: Asare, Eugenia
name: Pomerantsev, Andrei
name: Moayeri, Mahtab
name: Martens, Craig
name: Porcella, Stephen
name: Gottesman, Susan
name: Leppla, Stephen
name: Vrentas, Catherine
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: β-galactosidase assay result summary. Results from two independent trials of the β-galactosidase assay depicted in Fig. 5b. (Each trial involved triplicate independent transformants for each mutant). In these assays, Miller units for each sample were corrected by first subtracting the value for the Hfq1 strain (used as a negative control), and then were compared to the corrected value for the wild-type Hfq3 strain, set to 100%. Mutants with negative values exhibited lower expression than the Hfq1 control strain. While we observed some variability in the signal as a percentage of the wild-type Hfq3 signal between trials, the same rank order of mutant expression levels was observed in each trial. Table S2. Plasmids created in this study. Table S3. Bacterial strains utilized and/or created in this study. Table S4. Primers utilized in this study. Table S5. MIC (μg/mL) of cell wall-targeting antibiotics for Hfq3 and GFP overexpression strains. (PDF 283 kb)