cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Phymatodesmus sakalava
Creators: name: Mesibov, Robert
name: Wesener, Thomas
name: Hollier, John
Publisher: name: Zenodo
Year: 2018
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Diplopoda
Polydesmida
Vaalogonopodidae
Phymatodesmus
Phymatodesmus sakalava

description: Phymatodesmus sakalava (de Saussure & Zehnter, 1897)
Polydesmus sakalava de Saussure & Zehntner, 1897: plate 5, fig. 22 (figure and caption only)
Polydesmus (Phymatodesmus) sakalava —de Saussure & Zehntner 1902: 95 (redescription)
Phymatodesmus sakalava — Attems 1940: 490 (list)
Phymatodesmus [sakalava]— Hoffman 1980: 186 (genus Phymatodesmus with one species from Madagascar tentatively assigned to family Vaalogonopodidae)
Phymatodesmus sakalava — Enghoff 2003: 623 (list, in family Dalodesmidae)
Type: 1 female (fragmented), Muséum d’histoire naturelle, Geneva.
Type locality: Madagascar, coll. Sikora.
Remarks: Franz Sikora mainly collected around the capital, Antananarivo, with a shorter, later stay in Fort Dauphin (Tolagnaro, southeast Madagascar). As the holotype of P. sakalava is female, the collection of a male will be necessary to ascertain the status and generic assignment of the species.
description: Published as part of Mesibov, Robert, Wesener, Thomas & Hollier, John, 2018, A replacement name for Dalodesmus sakalava (de Saussure & Zehntner, 1901) (Diplopoda: Polydesmida: Dalodesmidae), pp. 389-391 in Zootaxa 4413 (2) on pages 389-390, DOI: 10.11646/zootaxa.4413.2.11, http://zenodo.org/record/1226921
Lycodes raridens Taranetz & Andriashev 1937
Creators: name: Love, Milton S.
name: Bizzarro, Joseph J.
name: Cornthwaite, Maria
name: Frable, Benjamin W.
name: Maslenikov, Katherine P.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Perciformes
Zoarcidae
Lycodes
Lycodes raridens

description: Lycodes raridens Taranetz & Andriashev, 1937.
Marbled Eelpout. To 86 cm (34.4 in) TL (Balanov et al. 2006). Sea of Okhotsk and northern Sea of Japan; Bering Sea (in eastern Bering Sea to outer Bristol Bay) to East Siberian Sea, Chukchi Sea, and western Beaufort Sea (eastward to north of Arey Island at 70°36’N, 143°55’W); one capture north of Near Islands, western Aleutian Islands (Mecklenburg et al. 2016). Benthic; depth: 8–525 m (26–1,722 ft) (min.: Mecklenburg et al. 2002; max.: Kim 2001).
description: Published as part of Love, Milton S., Bizzarro, Joseph J., Cornthwaite, Maria, Frable, Benjamin W. & Maslenikov, Katherine P., 2021, Checklist of marine and estuarine fishes from the Alaska-Yukon Border, Beaufort Sea, to Cabo San Lucas, Mexico, pp. 1-285 in Zootaxa 5053 (1) on page 184, DOI: 10.11646/zootaxa.5053.1.1, http://zenodo.org/record/5578008
Cross-dialect lexicon optimisation for an endangered language ASR system: the case of Irish
Creators: name: Lonergan, L
name: Qian, M
name: Chiaráin, NN
name: Gobl, C
name: Chasaide, AN
Publisher: name: ISCA
Year: 2022
Subjects: Irish
speech recognition
cross-dialect variation
lexicon
minority language

description: Lexicon optimisation strategies, addressing the problem of dialect divergence, are tested in an ASR system for Irish. As in many endangered languages, Irish has no spoken standard, but rather, three very different dialects of Ulster (Ul), Connaught (Co) and Munster (Mu). Furthermore, the complex sound system and ancient, opaque writing system result in sound-to-grapheme mappings that differ considerably across dialects. A hybrid ASR system was trained on (predominantly) native speaker speech data, balanced across the dialects. Experiment 1 tested whether a Global lexicon, which captures dialect variant forms with relatively abstract representations, can perform as well as a Multi-dialect lexicon containing all dialect variants. Three dialect-specific lexicons were also included in the tests. The Global lexicon did yield the best performance and experiment 2 tested whether further reductions to its phoneset might further enhance its performance. These included (i) merging a Tense-Lax contrast among coronal sonorants, not common to all dialects, and (ii) merging the contrast of voiceless-voiced sonorants, as the voiceless member is relatively infrequent. Results showed but a slight enhancement and only for Mu dialect, which is the one most aligned to the phoneset reduction.
Additional file 1: Figure S1. of Trajectories of the relationships of physical activity with body composition changes in older men: the MrOS study
Creators: name: Laddu, Deepika
name: Cawthon, Peggy
name: Parimi, Neeta
name: Hoffman, Andrew
name: Orwoll, Eric
name: Miljkovic, Iva
name: Stefanick, Marcia
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: Computational Biology
subject: Cardiology

description: Flow Chart describing MrOS sample size for Trajectory Analysis. This figure describes, total sample size of men included from each study visit, and specifically, the sample of men with non missing values for the body composition and PASE score. A description of how the Proc Traj methods accommodates missing data into the trajectory building is also provided. Table S1. Declining Patterns of Body Composition Changes From Visit 1 to Visit 3 (2000 to 2009). This table reports the individual patterns of change in body weight, lean mass, and fat mass, according to the most parsimonious model of eight body weight trajectories, five fat mass trajectories groups and six lean mass trajectories, respectively. (DOCX 30 kb)
Additional file 1: Figure S1. of Trajectories of the relationships of physical activity with body composition changes in older men: the MrOS study
Creators: name: Laddu, Deepika
name: Cawthon, Peggy
name: Parimi, Neeta
name: Hoffman, Andrew
name: Orwoll, Eric
name: Miljkovic, Iva
name: Stefanick, Marcia
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Mental Health
subject: Computational Biology
subject: Cardiology

description: Flow Chart describing MrOS sample size for Trajectory Analysis. This figure describes, total sample size of men included from each study visit, and specifically, the sample of men with non missing values for the body composition and PASE score. A description of how the Proc Traj methods accommodates missing data into the trajectory building is also provided. Table S1. Declining Patterns of Body Composition Changes From Visit 1 to Visit 3 (2000 to 2009). This table reports the individual patterns of change in body weight, lean mass, and fat mass, according to the most parsimonious model of eight body weight trajectories, five fat mass trajectories groups and six lean mass trajectories, respectively. (DOCX 30 kb)
Baffinicythere Hazel 1967
Creators: name: Schornikov, Evgeny I.
Publisher: name: Zenodo
Year: 2006
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Ostracoda
Podocopida
Hemicytheridae
Baffinicythere

description: Genus BAFFINICYTHERE Hazel, 1967
101. B. ishizakii Irizuki, 1996 ­ Schornikov, 1996: 40 (B. sp.); Schornikov & Sokolenko, 1999a: 182 (B. cf. i.); 1999b: 216 (B. cf. i.); Schornikov, 2000: 185 (B. cf. i.); Schornikov & Zenina, 2004b: 216.
description: Published as part of Schornikov, Evgeny I., 2006, Checklist of the ostracod (Crustacea) fauna of Peter the Great Bay, Sea of Japan, pp. 29-59 in Zootaxa 1294 on page 41, DOI: 10.5281/zenodo.173519
Elofsonella Pokorny 1955
Creators: name: Schornikov, Evgeny I.
Publisher: name: Zenodo
Year: 2006
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Ostracoda
Podocopida
Hemicytheridae
Elofsonella

description: Genus ELOFSONELLA Pokorny, 1955
102. E. cf. concinna (Jones, 1857) ­ Schornikov, 1996: 40 (Elofsonia (sic.) cf. c.); Schornikov & Sokolenko, 1999a: 182 (Elofsonia (sic.) cf. c.); 1999b: 216 (Elofsonia (sic.) cf. c.); Schornikov, 2000: 185 (Elofsonia (sic.) cf. c.); Schornikov & Zenina, 2004b: 216.
description: Published as part of Schornikov, Evgeny I., 2006, Checklist of the ostracod (Crustacea) fauna of Peter the Great Bay, Sea of Japan, pp. 29-59 in Zootaxa 1294 on page 41, DOI: 10.5281/zenodo.173519
Lycodes reticulatus Reinhardt 1835
Creators: name: Love, Milton S.
name: Bizzarro, Joseph J.
name: Cornthwaite, Maria
name: Frable, Benjamin W.
name: Maslenikov, Katherine P.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Perciformes
Zoarcidae
Lycodes
Lycodes reticulatus

description: Lycodes reticulatus Reinhardt, 1835.
Arctic Eelpout. To about 65 cm (25.6 in) TL; a 75 cm (29.5 in) record from Labrador may represent Lycodes lavalaei Vladykov & Tremblay, 1936. Arctic Canada at Ellesmere Island eastwards to Barents, Kara, and Laptev Seas; Alaska, and Canada Beaufort Sea from 151°06’W eastward to 70°32’N, 130°50’W. Benthic; depth: 6–930 m (20–3,051 ft). All in Mecklenburg et al. (2016). Note that the differences between this species and L. rossi are unclear (Mecklenburg et al. 2011), and L. reticulatus may be a senior synonym of L. rossi (Mecklenburg and Steinke 2015).
description: Published as part of Love, Milton S., Bizzarro, Joseph J., Cornthwaite, Maria, Frable, Benjamin W. & Maslenikov, Katherine P., 2021, Checklist of marine and estuarine fishes from the Alaska-Yukon Border, Beaufort Sea, to Cabo San Lucas, Mexico, pp. 1-285 in Zootaxa 5053 (1) on page 184, DOI: 10.11646/zootaxa.5053.1.1, http://zenodo.org/record/5578008
Barentsovia Neale 1974
Creators: name: Schornikov, Evgeny I.
Publisher: name: Zenodo
Year: 2006
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Ostracoda
Podocopida
Hemicytheridae
Barentsovia

description: Subgenus BARENTSOVIA Neale, 1974
103. F. (B.) nealei Okada, 1979 ­ Schornikov & Zenina, 2004b: 216.
description: Published as part of Schornikov, Evgeny I., 2006, Checklist of the ostracod (Crustacea) fauna of Peter the Great Bay, Sea of Japan, pp. 29-59 in Zootaxa 1294 on page 41, DOI: 10.5281/zenodo.173519
title: Mindfulness-Based Interventions for Psychological Wellbeing and Quality of Life in Men with Prostate Cancer
title: Conference material for: The late breaking poster 'Mindfulness-Based Interventions for Psychological Wellbeing and Quality of Life in Men with Prostate Cancer'
titleType: AlternativeTitle
Creators: name: Nnate, D.A.
name: Abaraogu, U.O.
Publisher: name: American Psychosocial Oncology Society
Year: 2021
Subjects: subject: Systematic review
subject: mindfulness-based interventions
subject: Psycho-oncology
subject: Prostate cancer
subject: Quality of life
subject: 150

description: Late-Breaking Poster Presentation at the 18th Annual American Psychosocial Oncology Society (APOS) Virtual Conference, March 10-12, 2021
Additional file 1: Figure S1. of The effect of volumetric breast density on the risk of screen-detected and interval breast cancers: a cohort study
Creators: name: Wanders, Johanna
name: Holland, Katharina
name: Karssemeijer, Nico
name: Peeters, Petra
name: Veldhuis, Wouter
name: Ritse Mann
name: Gils, Carla Van
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Plant Biology

description: Associations between mammographic density measures and breast cancer risk (second category used as reference). In the Cox proportional hazards analyses age was used as the underlying time scale. Pt p trend: this was determined by adding the categorical measures as a continuous measure into the model, PDV percentage dense volume, DV dense volume, Per SD per standard deviation. *Absolute dense volume measures are adjusted for nondense (breast fat) volume. (DOCX 185 kb)
Finmarchinella Swain 1963
Creators: name: Schornikov, Evgeny I.
Publisher: name: Zenodo
Year: 2006
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Ostracoda
Podocopida
Hemicytheridae
Finmarchinella

description: Subgenus FINMARCHINELLA Swain, 1963
104. F. (F.) uranipponica Ishizaki, 1969 ­ Schornikov & Zenina, 2004b: 216.
description: Published as part of Schornikov, Evgeny I., 2006, Checklist of the ostracod (Crustacea) fauna of Peter the Great Bay, Sea of Japan, pp. 29-59 in Zootaxa 1294 on page 41, DOI: 10.5281/zenodo.173519
Metaclisa (Trichometaclisa) Nabozhenko & Mckellar & Bukejs 2021, subgen. nov.
Creators: name: Nabozhenko, Maxim V.
name: Mckellar, Ryan C.
name: Bukejs, Andris
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Tenebrionidae
Metaclisa

description: Subgenus Trichometaclisa subgen. nov.
Type species: Metaclisa ottoi sp. nov., by present designation.
Diagnosis. The type species of the new subgenus differs from all known Metaclisini in the presence of short, fine recumbent setation on dorsal surface (at least on pronotum and elytra); this is a significant difference from all known extant Metaclisa (body dorsally glabrous), and the new species is further distinguished by flattened lateral sides of the pronotum. In addition, the prosternal process in Metaclisa ottoi sp. nov. is roundly bent down and weakly projecting posterior to procoxae, in contrast to extant species.
Etymology. “ Tricho -“ prefix comes from Greek thrix, trikhos for “hair”, and is combined with Metaclisa, type genus for the tribe. Gender feminine.
Notes. The taxonomic placement of the studied species within the family Tenebrionidae is based on the following combination of features: tarsal formula 5-5-4, antennae 11-segmented, genae conceal base of antennomere 1, five abdominal ventrites with intersegmental membranes between ventrites 3–5 (tenebrionoid lineage of the family). The specimen is externally very similar to genera of the tribe Alphitobiini Reitter, 1917, especially Alphitopsis initialis Kirejtshuk, Nabozhenko & Nel, 2011 (extinct, Early Cretaceous), Alphitobius Stephens, 1829 (extant) and Diaclina Jacquelin du Val, 1861 (extant). However, it can be distinguished from these genera based upon the following characters, which have been indicated partly by Kirejtshuk et al. (2011) and completely by Steiner (2016) for Metaclisa: basal tarsomeres ventrally bear dense pads of fine golden setae, not arranged in two rows; the first (epipleural) elytral punctate stria tapers to end before the elytral apex and does not join the sutural stria at the apex; and epipleura ending before elytral apex (only this character of the three listed is visible on the compression fossil of Alphitopsis). The combination of other external characters also corresponds to the diagnosis of the tribe Metaclisini (Steiner 2016). The elytral setation of Metaclisa ottoi is an unusual character for Metaclisini, but we believe that only this one character is not enough to give a genus rank to a new taxon. Metaclisa ottoi additionally differs from extinct Alphitopsis initialis base upon the structure of its antennae (antennomeres 6–10 possess a stick-shaped base in Alphitopsis).
description: Published as part of Nabozhenko, Maxim V., Mckellar, Ryan C. & Bukejs, Andris, 2021, The first described darkling beetle of the tribe Metaclisini (Coleoptera: Tenebrionidae) from Eocene Baltic amber, pp. 279-284 in Zootaxa 4999 (3) on page 280, DOI: 10.11646/zootaxa.4999.3.7, http://zenodo.org/record/5119108
Lycodes rossi Malmgren 1865
Creators: name: Love, Milton S.
name: Bizzarro, Joseph J.
name: Cornthwaite, Maria
name: Frable, Benjamin W.
name: Maslenikov, Katherine P.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Perciformes
Zoarcidae
Lycodes
Lycodes rossi

description: Lycodes rossi Malmgren, 1865.
Threespot Eelpout. To 31 cm (12.2 in) or 38 cm (15 in) TL (Mecklenburg et al. 2018). Nearly circumpolar; Greenland eastward to Laptev Sea; Beaufort Sea off Alaska (as far west as 155°W) eastward to Dease Strait, Canada. Not verified from Chukchi Sea (Mecklenburg et al. 2016). Benthic; depth: 42–467 m (138–1,532 ft); juveniles as shallow as 9 m (30 ft) (min.: Mecklenburg et al. 2016; max. Personal communication: University of Washington, Burke Museum of Natural History and Culture Fish Collection, Seattle, Washington). There are no clear distinctions between L. rossi and L. reticulatus and thus data on distributions are problematic (Mecklenburg et al. 2011, Mecklenburg and Steinke 2015).
description: Published as part of Love, Milton S., Bizzarro, Joseph J., Cornthwaite, Maria, Frable, Benjamin W. & Maslenikov, Katherine P., 2021, Checklist of marine and estuarine fishes from the Alaska-Yukon Border, Beaufort Sea, to Cabo San Lucas, Mexico, pp. 1-285 in Zootaxa 5053 (1) on page 184, DOI: 10.11646/zootaxa.5053.1.1, http://zenodo.org/record/5578008
ТУҒМА БРОНХ АНОМАЛИЯЛАРИДА МОЛЕКУЛЯР-ГЕНЕТИК ТАҲЛИЛ: ДАВОЛАШДАГИ ЯНГИ СТРАТЕГИЯЛАР
Creators: name: Шевкетова, Л.Ш.
name: Маҳкамов, Н.Ж.
Publisher: name: Zenodo
Year: 2025

description: Туғма бронх аномалиялари нафас йўлларининг ривожланишидаги бузилишлар билан тавсифланади ва янги туғилган чақалоқларда кенг тарқалган ҳолатлардан биридир. Бу аномалиялар нафас олиш тизимига жиддий таъсир кўрсатиб, гипоксия, пневмония ва бронхиал тўсилишлар каби асоратларга олиб келиши мумкин. Туғма бронх аномалияларининг молекуляр-генетик таҳлили бу патологияларнинг асосий сабабларини аниқлашга ёрдам беради ва бу билан самарали даволаш усулларини ривожлантиришга ишора қилади. Генетик таҳлиллар ва эпигенетик механизмларни ўрганиш орқали патогенезнинг мураккаблигини тушуниш, уларга қарши янги терапевтик стратегийаларни ишлаб чиқишда катта аҳамият касб этади.
Hemicythere Sars 1925
Creators: name: Schornikov, Evgeny I.
Publisher: name: Zenodo
Year: 2006
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Ostracoda
Podocopida
Hemicytheridae
Hemicythere

description: Genus HEMICYTHERE Sars, 1925
105. * H. gorokuensis Ishizaki, 1966 ­ Schornikov, 1974: 169; 1998: 227; 2000: 184. Remarks. Soft part structures were described by Schornikov, 1974: 169, text­fig. 17.
106. * H. orientalis Schornikov, 1974 ­ Schornikov, 1974: 168, pl. 3, fig. 1g, d, e; 1997: 96; 1998: 227; Schornikov & Sokolenko, 1999a: 182; 1999b: 216; Schornikov, 2000: 184; Schornikov & Zenina, 2004b: 216, figs. 3 (3, 4).
107. * H. posterovestibulata Schornikov, 1974 ­ Schornikov, 1974: 171; Schornikov, 1997: 96; Schornikov, 1998: 227.
108. * H.? emarginata (Sars, 1866) ­ Schornikov, 1996: 40 (“H.” e.); 1997: 96 (H. e.); Schornikov & Sokolenko, 1999a: 182; 1999b: 216; Schornikov, 2000: 184, 185; Schornikov & Zenina, 2004b: 216.
description: Published as part of Schornikov, Evgeny I., 2006, Checklist of the ostracod (Crustacea) fauna of Peter the Great Bay, Sea of Japan, pp. 29-59 in Zootaxa 1294 on pages 41-42, DOI: 10.5281/zenodo.173519
Daishakacythere Tabuki 1986
Creators: name: Schornikov, Evgeny I.
Publisher: name: Zenodo
Year: 2006
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Ostracoda
Podocopida
Hemicytheridae
Daishakacythere

description: Genus DAISHAKACYTHERE Tabuki, 1986
109. D. abei Tabuki, 1986 ­ Schornikov & Sokolenko, 1999a: 182; 1999b: 216; Schornikov & Zenina, 2004b: 216.
description: Published as part of Schornikov, Evgeny I., 2006, Checklist of the ostracod (Crustacea) fauna of Peter the Great Bay, Sea of Japan, pp. 29-59 in Zootaxa 1294 on page 42, DOI: 10.5281/zenodo.173519
Lycodes sagittarius McAllister 1976
Creators: name: Love, Milton S.
name: Bizzarro, Joseph J.
name: Cornthwaite, Maria
name: Frable, Benjamin W.
name: Maslenikov, Katherine P.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Perciformes
Zoarcidae
Lycodes
Lycodes sagittarius

description: Lycodes sagittarius McAllister, 1976.
Archer Eelpout. To 42.7 cm (16.8 in) TL (Personal communication: California Academy of Sciences Fish Collection, San Francisco, California). Beaufort Sea, Alaska, and Kara, and Laptev Seas (Mecklenburg et al. 2016). Captures in the Chukchi Sea have not been verified (Mecklenburg et al. 2016). Benthic; depth: 120 to at least 1,934 m (394–6,344 ft), and perhaps to 2,151 m (7,055 ft) (Mecklenburg et al. 2016). Specimens with white bars and fewer vertebrae from Franklin Bay in the Canadian part of the Beaufort Sea identified as L. sagittarius (illustrated in McAllister et al. 1981; Mecklenburg et al. 2002) are L. marisalbi. Lycodes sagittarius consists of uniformly brown specimens only (Møller 2000). Lycodes sagittarius may be a junior synonym of Lycodes marisalbi Knipowitsch, 1906 (Mecklenburg et al. 2018).
description: Published as part of Love, Milton S., Bizzarro, Joseph J., Cornthwaite, Maria, Frable, Benjamin W. & Maslenikov, Katherine P., 2021, Checklist of marine and estuarine fishes from the Alaska-Yukon Border, Beaufort Sea, to Cabo San Lucas, Mexico, pp. 1-285 in Zootaxa 5053 (1) on page 184, DOI: 10.11646/zootaxa.5053.1.1, http://zenodo.org/record/5578008
TADA: Taxonomic aware dataset assembler - Use case examples
Creators: name: Hägglund, Emil
name: Andersson, Siv G. E.
name: Guy, Lionel
Publisher: name: Department of Cell and Molecular Biology
Year: 2023
Subjects: classificationCode: 310410
subject: Phylogeny and comparative analysis
classificationCode: 310201
subject: Bioinformatic methods development

description: This directory contains data for use case examples of the TADA: Taxonomic aware dataset assembler. The directory contains alignments, trimmed alignments, and phylogenies for three different datasets of the Planctomycetota phylum constructed through taxonomic sampling, phylogenomic sampling, and random sampling.
Johnnealella Hanai & Ikeya 1991
Creators: name: Schornikov, Evgeny I.
Publisher: name: Zenodo
Year: 2006
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Ostracoda
Podocopida
Hemicytheridae
Johnnealella

description: Genus JOHNNEALELLA Hanai & Ikeya, 1991
110. J. cf. nopporensis Hanai & Ikeya, 1991 ­ Schornikov & Sokolenko, 1999a: 182; 1999b: 216; Schornikov & Zenina, 2004b: 216.
description: Published as part of Schornikov, Evgeny I., 2006, Checklist of the ostracod (Crustacea) fauna of Peter the Great Bay, Sea of Japan, pp. 29-59 in Zootaxa 1294 on page 42, DOI: 10.5281/zenodo.173519
Is "universal syntax" universally useful for learning distributed word representations?
Creators: name: Vulić, I
name: Korhonen, A
Publisher: name: Association for Computational Linguistics
Year: 2016
Subjects: Word embeddings
Learning from context
Syntactic contexts
Multilinguality

description: Recent comparative studies have demonstrated the usefulness of dependency-based contexts (DEPS) for learning distributed word representations for similarity tasks. In English, DEPS tend to perform better than the more common, less informed bag-of-words contexts (BOW). In this paper, we present the first cross-linguistic comparison of different context types for three different languages. DEPS are extracted from ``universal parses'' without any language-specific optimization. Our results suggest that the universal DEPS (UDEPS) are useful for detecting functional similarity (e.g., verb similarity, solving syntactic analogies) among languages, but their advantage over BOW is not as prominent as previously reported on English. We also show that simple ``post-parsing'' filtering of useful UDEPS contexts leads to consistent improvements across languages.
Lycodes seminudus Reinhardt 1837
Creators: name: Love, Milton S.
name: Bizzarro, Joseph J.
name: Cornthwaite, Maria
name: Frable, Benjamin W.
name: Maslenikov, Katherine P.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Perciformes
Zoarcidae
Lycodes
Lycodes seminudus

description: Lycodes seminudus Reinhardt, 1837.
Longear Eelpout. To 57 cm (22.4 in) TL (Møller and Jørgensen 2000). Likely circumpolar, lacking documentation from the East Siberian Sea and the central Canadian Arctic; Chukchi Borderland eastward to Dease Strait, Canada (Mecklenburg et al. 2016). Benthic; depth: 50–2,000 m (164– 6,650 ft) (min.: Mecklenburg et al. 2011; max.: Møller in Coad and Møller 2018).
description: Published as part of Love, Milton S., Bizzarro, Joseph J., Cornthwaite, Maria, Frable, Benjamin W. & Maslenikov, Katherine P., 2021, Checklist of marine and estuarine fishes from the Alaska-Yukon Border, Beaufort Sea, to Cabo San Lucas, Mexico, pp. 1-285 in Zootaxa 5053 (1) on page 185, DOI: 10.11646/zootaxa.5053.1.1, http://zenodo.org/record/5578008
Additional file 3: of Health professionalsâ   views on the barriers and enablers to evidence-based practice for acute stroke care: a systematic review
Creators: name: Baatiema, Leonard
name: Otim, Michael
name: Mnatzaganian, George
name: Ama De-Graft Aikins
name: Coombes, Judith
name: Somerset, Shawn
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Science Policy
subject: Computational Biology

description: Checklist for Barriers and Enablers. (DOCX 12 kb)
Yezocythere Hanai & Ikeya 1991
Creators: name: Schornikov, Evgeny I.
Publisher: name: Zenodo
Year: 2006
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Ostracoda
Podocopida
Hemicytheridae
Yezocythere

description: Genus YEZOCYTHERE Hanai & Ikeya, 1991
111. Y. hayashii Hanai & Ikeya, 1991 ­ Schornikov & Sokolenko, 1999a: 182; 1999b: 216; Schornikov, 2000: 184; Schornikov & Chavtur, 2001: 93; 2002: 96; Schornikov & Zenina, 2004b: 216, figs. 3 (5, 6).
description: Published as part of Schornikov, Evgeny I., 2006, Checklist of the ostracod (Crustacea) fauna of Peter the Great Bay, Sea of Japan, pp. 29-59 in Zootaxa 1294 on page 42, DOI: 10.5281/zenodo.173519
Lycodes soldatovi Taranetz & Andriashev 1935
Creators: name: Love, Milton S.
name: Bizzarro, Joseph J.
name: Cornthwaite, Maria
name: Frable, Benjamin W.
name: Maslenikov, Katherine P.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Perciformes
Zoarcidae
Lycodes
Lycodes soldatovi

description: Lycodes soldatovi Taranetz & Andriashev, 1935.
Dipline Eelpout. To 96 cm (37.8 in) FL (Kulik et al. 2016). Seas of Okhotsk and Japan to Bering Sea (Lindberg and Krasyukova 1975); one record from Alaska (Mecklenburg et al. 2002). Balanov et al. (2004) question whether this species occurs in the Sea of Japan. Benthic; depth: 153–1,030 m (502–3,379 ft) (Federov et al. 2003).
description: Published as part of Love, Milton S., Bizzarro, Joseph J., Cornthwaite, Maria, Frable, Benjamin W. & Maslenikov, Katherine P., 2021, Checklist of marine and estuarine fishes from the Alaska-Yukon Border, Beaufort Sea, to Cabo San Lucas, Mexico, pp. 1-285 in Zootaxa 5053 (1) on page 185, DOI: 10.11646/zootaxa.5053.1.1, http://zenodo.org/record/5578008
Isanthidae Carlgren 1938
Creators: name: Häussermann, Verena
name: Försterra, Günter
Publisher: name: Zenodo
Year: 2008
Subjects: Biodiversity
Taxonomy
Animalia
Cnidaria
Anthozoa
Actiniaria
Isanthidae

description: Family Isanthidae Carlgren, 1938
Definition of the family Isanthidae
Carlgren (1938, p. 59) defined the family Isanthidae as “ Nynantheae with basilar muscles. Sphincter mesogloeal. Mesenteries divisible into macro- and microcnemes. No acontia.” In his catalogue, Carlgren (1949, p. 76) changed the family definition to “Thenaria (Mesomyaria) with well developed mesogloeal sphincter. Mesenteries divisible into macro- and microcnemes. No acontia. Retractors of mesenteries very strong, strongly restricted (reniform) to almost circumscribed.” Due to the weak sphincter of Eltaninactis infundibulum, Dunn (1983, p. 58) proposed to alter the first sentence of the generic description to “Thenaria (Mesomyaria) with mesogloeal sphincter...” instead of “….with well developed mesogleal sphincter…”. Uncertainty remains over the affiliation of the genus Eltaninactis to the family Isanthidae, as noted in Sanamyan’s (2001) description of E. psammophorum.
Type species: Isanthus capensis Carlgren, 1938 (Fig. 6)
Definition of the genus Paraisanthus Sanamyan and Sanamyan, 1998:
Isanthidae with well-developed pedal disc. Column smooth. Margin distinct. Sphincter mesogloeal, well developed. Radial muscles of oral disc and longitudinal muscles of tentacles ectodermal. Two siphonoglyphs, two pairs of directives. Six pairs of macrocnemes. More mesenteries distally than proximally, at least in adults.
Cnidom: spirocysts, p-mastigophores, basitrichs, heterotrichs, holotrichs.
Type species: Paraisanthus tamarae Sanamyan and Sanamyan, 1998
description: Published as part of Häussermann, Verena & Försterra, Günter, 2008, A new species of sea anemone from the Chilean fjord region, Paraisanthus fabiani (Actiniaria: Isanthidae), with a discussion of the family Isanthidae Carlgren, 1938, pp. 27-42 in Zootaxa 1897 on pages 31-32, DOI: 10.5281/zenodo.184465
Shape of a bistable composite tape-spring in folding
Creators: name: Wang, B
name: Seffen, KA
name: Guest, SD
Publisher: name: American Institute of Aeronautics and Astronautics
Year: 2019

description: A composite tape-spring structure is a thin-walled, laminated open slit tube. With fibres oriented at ±45˚, it is stable in both the extended and coiled configurations. In this research, we devise a simple ‘free’ bending system with minimal constraints to evaluate the folding nature of composite tape-springs. The shape of the tape-spring is characterised by considering both the shape during folding and the final folded shape. Experiments are carried out on composite tapes with different geometries: a finite element model is established and calibrated using the experimental results; a parametric study on the folded tape shape is performed based on a theoretical model to evaluate the effects of the initial geometry. Torsional buckling is clearly observed, and complemented with details from the FE model. Here, we show good agreement between experiments, simulation and theoretical analysis.
Lycodes squamiventer Jensen 1904
Creators: name: Love, Milton S.
name: Bizzarro, Joseph J.
name: Cornthwaite, Maria
name: Frable, Benjamin W.
name: Maslenikov, Katherine P.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Perciformes
Zoarcidae
Lycodes
Lycodes squamiventer

description: Lycodes squamiventer Jensen, 1904.
Scalebelly Eelpout. To 37 cm (14.6 in) TL. Arctic Ocean north of Svalbard; deep slopes of the Barents, Norwegian, and Greenland Seas southward to the Iceland-Faroe-Shetland Slope; Alaska and Canadian Beaufort Seas (from 71°26’N, 151°06’W eastwards to 71°09’N, 134°59’W). Bathybenthic; depth: 160–1,808 m (524–5,930 ft). All in Mecklenburg et al. (2016).
description: Published as part of Love, Milton S., Bizzarro, Joseph J., Cornthwaite, Maria, Frable, Benjamin W. & Maslenikov, Katherine P., 2021, Checklist of marine and estuarine fishes from the Alaska-Yukon Border, Beaufort Sea, to Cabo San Lucas, Mexico, pp. 1-285 in Zootaxa 5053 (1) on page 185, DOI: 10.11646/zootaxa.5053.1.1, http://zenodo.org/record/5578008
Cornucoquimba Ohmert 1968
Creators: name: Schornikov, Evgeny I.
Publisher: name: Zenodo
Year: 2006
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Ostracoda
Podocopida
Hemicytheridae
Cornucoquimba

description: Genus CORNUCOQUIMBA Ohmert, 1968
112. C. sp. ­ Schornikov & Chavtur, 2001: 93; 2002: 96; Schornikov & Zenina, 2004b: 217, figs. 3 (9, 10) (C. shinyangriensis Lee, 1990 MS).
description: Published as part of Schornikov, Evgeny I., 2006, Checklist of the ostracod (Crustacea) fauna of Peter the Great Bay, Sea of Japan, pp. 29-59 in Zootaxa 1294 on page 42, DOI: 10.5281/zenodo.173519
Introduction to Data Management Practices - course introduction
Creators: name: Jareborg, Niclas
Publisher: name: National Bioinformatics Infrastructure Sweden (NBIS)
Year: 2023
Subjects: classificationCode: 460599
subject: Data management and data science not elsewhere classified

description: Course introductory slides.
It was delivered during the course Introduction to Data Management Practices for National Genomics Infrastructure organised by NBIS Data Management team in September 2023. 
The target audience is research infrastructure staff at a data producing sequencing facility.
Additional file 1: Table S1. of Blood pressure in young adulthood and residential greenness in the early-life environment of twins
Creators: name: EsmĂŠe Bijnens
name: Nawrot, Tim
name: Loos, Ruth
name: Gielen, Marij
name: Vlietinck, Robert
name: Derom, Catherine
name: Zeegers, Maurice
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Hematology

description: Pearson correlation coefficient between greenness in early-life and adult life. Table S2. Collinearity diagnosis. Table S3. Estimated difference in night systolic blood pressure (mm Hg) with land-use indicators at birth in all buffer sizes in twins who moved since birth. Figure S1. Ambulatory blood pressure (mm Hg) in association with residential greenness exposure with no adjustment for exposure in adulthood/early-life in twins who moved during life. Figure S2. Ambulatory blood pressure (mm Hg) in association with residential area. Figure S3. Ambulatory blood pressure (mm Hg) in association with industrial area. (DOCX 872 kb)
Lycodes turneri Bean 1879
Creators: name: Love, Milton S.
name: Bizzarro, Joseph J.
name: Cornthwaite, Maria
name: Frable, Benjamin W.
name: Maslenikov, Katherine P.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Perciformes
Zoarcidae
Lycodes
Lycodes turneri

description: Lycodes turneri Bean, 1879.
Estuarine Eelpout or Polar Eelpout. To 85 cm (33.5 in) SL (Mecklenburg et al. 2018). Western Beaufort (Mecklenburg et al. 2011), and Chukchi Seas to Bristol Bay in the eastern Bering Sea to about Cape Olyutorskiy in the western Bering Sea (Mecklenburg et al. 2002). Benthic; depth: 1–125 m (3–410 ft) (min.: Mecklenburg et al. 2011; max.: Allen and Smith 1988). Historically, this species, Lycodes mucosus, and Lycodes polaris have often been mistaken for one another. The AFS–ASIH fish names committee (Page et al. 2013) calls this fish the Polar Eelpout, the name we prefer for L. polaris.
description: Published as part of Love, Milton S., Bizzarro, Joseph J., Cornthwaite, Maria, Frable, Benjamin W. & Maslenikov, Katherine P., 2021, Checklist of marine and estuarine fishes from the Alaska-Yukon Border, Beaufort Sea, to Cabo San Lucas, Mexico, pp. 1-285 in Zootaxa 5053 (1) on page 185, DOI: 10.11646/zootaxa.5053.1.1, http://zenodo.org/record/5578008
Tritegeus Berlese 1913
Creators: name: Ermilov, Sergey G.
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Sarcoptiformes
Cepheusidae
Tritegeus

description: Genus Tritegeus Berlese, 1913 (= Sphodrocepheus Woolley & Higgins, 1963)
Type species: Tritegeus bisulcatus Grandjean, 1953
description: Published as part of Ermilov, Sergey G., 2024, Taxonomic contribution to knowledge of the oribatid mite genus Tritegeus (Acari, Oribatida, Cepheusidae), pp. 37-50 in Zootaxa 5556 (1) on page 38, DOI: 10.11646/zootaxa.5556.1.4, http://zenodo.org/record/14595292
Open Science & FAIR
Creators: name: Jareborg, Niclas
Publisher: name: National Bioinformatics Infrastructure Sweden (NBIS)
Year: 2023
Subjects: classificationCode: 460599
subject: Data management and data science not elsewhere classified

description: This talk presented motivations for Open Science and the FAIR principles.
It was delivered during the course Introduction to Data Management Practices for National Genomics Infrastructure organised by NBIS Data Management team in September 2023. 
The target audience is research infrastructure staff at a data producing sequencing facility.

The objective was that the audience at the end of the talk should be able to:

 Describe some reasons for the principles of Open Science and FAIR
Accompanying files - IMERGE-FEP: Improving Relative Free Energy Calculation Convergence with Chemical Intermediates
Creators: name: Schoenmaker, Linde
Publisher: name: Zenodo
Year: 2024
Subjects: relative free energy
chemical intermediates
gromacs

description: Accompanying files for IMERGE-FEP manuscript

Contains link to repository with code base for recreating results and zip file with the input files for RHFE runs in gromacs.

Zip files contains tpr.tpr files saved using the following structure

    \---edge_*P*_***        +---vacuum            \---n #lambda-window                +---run n                |   +---em                |   +---equil_npt                |   +---equil_nvt                |   \---production

        +---water            \---n #lambda-window                +---run n                |   +---em                |   +---equil_npt                |   +---equil_nvt                |   \---production

        +---protein            \---n #lambda-window                +---run n                |   +---em                |   +---equil_npt                |   +---equil_nvt                |   \---production         

Gromacs version gromacs/2022.1/gcc.8.4.0-cuda.11.7.1 was used.

 

CHANGELOG:

- add tpr files of simulations in protein
Accompanying files - IMERGE-FEP: Improving Relative Free Energy Calculation Convergence with Chemical Intermediates
Creators: name: Schoenmaker, Linde
Publisher: name: Zenodo
Year: 2024
Subjects: relative free energy
chemical intermediates
gromacs

description: Accompanying files for IMERGE-FEP manuscript

Contains link to repository with code base for recreating results and zip file with the input files for RHFE runs in gromacs.

Zip files contains tpr.tpr files saved using the following structure

    \---edge_*P*_***        +---vacuum            \---n #lambda-window                +---run n                |   +---em                |   +---equil_npt                |   +---equil_nvt                |   \---production

        +---water            \---n #lambda-window                +---run n                |   +---em                |   +---equil_npt                |   +---equil_nvt                |   \---production         

Gromacs version gromacs/2022.1/gcc.8.4.0-cuda.11.7.1 was used.
MOESM1 of Comparative metabolomics in vanilla pod and vanilla bean revealing the biosynthesis of vanillin during the curing process of vanilla
Creators: name: Fenglin Gu
name: Yonggan Chen
name: Yinghua Hong
name: Yiming Fang
name: Lehe Tan
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Pharmacology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified

description: Additional file 1: Figure S1. A part of components change in the process and relate to the vanillin biosynthesis. a. Erythrose-4-phosphate; b. Glucose; c. p-Hydroxybenzaldehyde; d. 3,4-Dihydroxybenzaldehyde; e. Protocatechuic acid; f. Cresol; g. 3-Dehydroshikimate; h. Vanillin; i. Vanillic acid; j. Vanillyl alcohol; k. Vanillylamine; l. Cinnamic acid; m. Phenylpyruvic acid, p-Coumaric acid; n. Cafferic acid; o. L-Phenylalanine; p. Tyrosine; q. Ferulic acid; r. Coniferyl alcohol; s. Glucovanillin; t. Capsaicin.
Lyconema barbatum Gilbert 1896
Creators: name: Love, Milton S.
name: Bizzarro, Joseph J.
name: Cornthwaite, Maria
name: Frable, Benjamin W.
name: Maslenikov, Katherine P.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Perciformes
Zoarcidae
Lyconema
Lyconema barbatum

description: Lyconema barbatum Gilbert, 1896.
Bearded Eelpout. To 22 cm (8.7 in) TL (Eric Miller, pers. comm. to M.L.). Northern Oregon (45°46’N, 124°40’W) (Personal communication: University of Washington, Burke Museum of Natural History and Culture Fish Collection, Seattle, Washington) to between Islas San Benito and Isla de Cedros (28°17’N, 115°28’W), central Baja California (Personal communication: Scripps Institution of Oceanography Fish Collection, La Jolla, California). Published reports of occurrence in the Bering Sea are mistaken (Mecklenburg et al. 2002). Benthic; depth: 45–472 m (148–1,548 ft) (min.: Personal communication: Southern California Coastal Water Research Project, Westminster, California. Unpublished data from their trawl surveys; max.: Shelly Moore, pers. comm. to M.L.).
description: Published as part of Love, Milton S., Bizzarro, Joseph J., Cornthwaite, Maria, Frable, Benjamin W. & Maslenikov, Katherine P., 2021, Checklist of marine and estuarine fishes from the Alaska-Yukon Border, Beaufort Sea, to Cabo San Lucas, Mexico, pp. 1-285 in Zootaxa 5053 (1) on page 185, DOI: 10.11646/zootaxa.5053.1.1, http://zenodo.org/record/5578008
Ceroplastes
Creators: name: Rainato, Alessio
name: Pellizzari, Giuseppina
Publisher: name: Zenodo
Year: 2008
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Coccidae
Ceroplastes

description: Key to Ceroplastes species based on adult males
1 Penial sheath with fleshy setae...................................................................................................................2
- Penial sheath without fleshy setae ...................................................................................... Waxiella species
2 Penial sheath apex rounded; fleshy setae absent on basal portion of penial sheath; glandular pouch absent .................................................................................................................................................... C.ceriferus
- Penial sheath apex pointed; fleshy setae present on basal portion of penial sheath; glandular pouches present or absent..........................................................................................................................................3
3 Penial sheath long (ratio of total body length to penial sheath length 1: 0.24); membranous area of scutum with 10–14 (12) fs and 6–10 (8) hs scutal setae; glandular pouches absent ............................ C. japonicus
- Penial sheath shorter (ratio of total body length to penial sheath length 1:0.15); membranous area of scutum with about 23 (fs+hs) scutal setae; glandular pouches present............................ C. cirripediformis
description: Published as part of Rainato, Alessio & Pellizzari, Giuseppina, 2008, Redescription of the adult male and description of second-instar male, prepupa and pupa of Ceroplastes japonicus Green (Hemiptera: Coccoidea: Coccidae), pp. 25-38 in Zootaxa 1895 on page 31, DOI: 10.5281/zenodo.184431
Additional file 1: of Prevalence and distribution of Gardnerella vaginalis subgroups in women with and without bacterial vaginosis
Creators: name: Migle Janulaitiene
name: Paliulyte, Virginija
name: Svitrigaile Grinceviciene
name: Zakareviciene, Jolita
name: Vladisauskiene, Alma
name: Marcinkute, Agne
name: Pleckaityte, Milda
Publisher: name: Figshare
Year: 2017
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Bacterial strains, primer sequences and PCR conditions for bacterium-specific PCR assays. (PDF 231 kb)
Krithe Brady, Crosskey & Robertson 1874
Creators: name: Schornikov, Evgeny I.
Publisher: name: Zenodo
Year: 2006
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Ostracoda
Podocopida
Krithidae
Krithe

description: Genus KRITHE Brady, Crosskey & Robertson, 1874
113. K. sawanensis Hanai, 1959 a ­ Schornikov & Sokolenko, 1999a: 182 (K. sp.); 1999b: 216 (K. sp.); Schornikov & Zenina, 2004b: 216.
description: Published as part of Schornikov, Evgeny I., 2006, Checklist of the ostracod (Crustacea) fauna of Peter the Great Bay, Sea of Japan, pp. 29-59 in Zootaxa 1294 on page 42, DOI: 10.5281/zenodo.173519
Microbrotula Gosline 1953
Creators: name: Schwarzhans, Werner
name: Nielsen, Jørgen G.
Publisher: name: Zenodo
Year: 2012
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Ophidiiformes
Bythitidae
Microbrotula

description: Microbrotula Gosline, 1953
Type species: Microbrotula rubra Gosline, 1953 (type locality: Kaneohe Bay, Oahu Island, Hawaii, U.S.A.). Microbrotula holds eight species: M. andersoni Schwarzhans & Nielsen, 2011, M. bentleyi Anderson, 2005, M. greenfieldi Anderson, 2007, M. hamata Schwarzhans & Nielsen, 2011, M. punicea Anderson, 2007, M. queenslandica Anderson, 2005, M. rubra Gosline, 1953 and M. geraldalleni n.sp.
Diagnosis. Small species usually not larger than 45 mm SL with few reaching a maximum of 52–60 mm SL. Vertebrae 11–13 + 33–38 = 44–51. Dorsal fin origin above vertebrae 7–11. Anal fin origin below vertebrae 13–17. Caudal fin rays 6–9. Pectoral fin rays 11–19. Pelvic peduncle not elongate. Branchiostegal rays 7. Head length 25.0–29.0 % SL. Interorbital width 3.9–7.0 % SL. Head with scales on cheek, opercle and occiput. Anterior nostril tubular, just above upper lip. Rear portion of maxilla vertically expanded. Vomerine teeth in two small patches; palatine teeth in single row or absent. Opercular spine thin, needle-like, often covered by skin; forward-curved spine at lower angle of preopercle covered by skin or absent. Developed gill rakers 2–4. Pores: 3 anterior mandibular, 3 posterior mandibular (except none in M. greenfieldi), no supraorbital, 1–3 lower preopercular, no upper preopercular (except 1 in M. rubra), 3 anterior infraorbital, no posterior infraorbital (except 3 in M. rubra).
Comparison and discussion. See Schwarzhans and Nielsen (2011).
description: Published as part of Schwarzhans, Werner & Nielsen, Jørgen G., 2012, A new species of the Genus Microbrotula (Teleostei: Bythitidae) from Cenderawasih Bay, New Guinea, Indonesia, pp. 71-76 in Zootaxa 3583 on page 72, DOI: 10.5281/zenodo.283105
Additional file 1: of Prevalence and distribution of Gardnerella vaginalis subgroups in women with and without bacterial vaginosis
Creators: name: Migle Janulaitiene
name: Paliulyte, Virginija
name: Svitrigaile Grinceviciene
name: Zakareviciene, Jolita
name: Vladisauskiene, Alma
name: Marcinkute, Agne
name: Pleckaityte, Milda
Publisher: name: Figshare
Year: 2017
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Bacterial strains, primer sequences and PCR conditions for bacterium-specific PCR assays. (PDF 231 kb)