cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Fragment formation in proton induced reactions within a BUU transport model
Creators: name: Gaitanos, T.
name: Lenske, H.
name: Mosel, U.
Publisher: name: arXiv
Year: 2007
Subjects: subject: Nuclear Theory (nucl-th)
subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: The formation of fragments in proton-induced reactions at low relativistic energies within a combination of a covariant dynamical transport model and a statistical approach is investigated. In particular, we discuss in detail the applicability and limitations of such a hybrid model by comparing data on fragmentation at low relativistic $SIS/GSI$-energies.
description: Revised version accepted for publication in Phys. Lett. B
Proteomic analysis of the silkworm midgut during larval-pupal transition
Creators: name: Kannan, M
name: Suryaaathmanathan, V
name: Saravanakumar, M
name: Jaleel, A
name: Romanelli, D
name: Tettamanti, G
name: Krishnan, M
Publisher: name: Invertebrate Survival Journal
Year: 2016

description: Metamorphosis is a key process in holometabolous insects since specific larval tissues, such as the midgut, the silk gland and the fat body, are remodeled into adult organs, or even disintegrate. However, the role of proteins and factors involved in the remodeling of these organs is still unclear. For this reason we undertook a proteomic study on the larval midgut of Bombyx mori to identify proteins whose expression significantly changes during larval-pupal metamorphosis and thus can have a role in this process. 2D-PAGE analysis showed upregulation or new expression of midgut proteins at 45 (pI 5.2), 29.8 (pI 6.11) and 20-kDa (pI 6-7) during the pupal stage. In addition zymogram analysis demonstrated the occurrence of protease activity at 37-kDa at the same developmental stage. By using MALDI-TOF-MS analysis the protein spots from 2D gel were identified as Hemolin, low molecular weight 30-kDa lipoproteins, HSP 20.8 and HSP 20.4, while the proteolytic band was identified as 37-kDa serine protease. The evidence herein presented suggests that the identified proteins could be involved in the immune protection during the remodeling of silkworm midgut that occurs at larval-pupal transition and represents a platform of knowledge necessary for future functional studies.
description: Invertebrate Survival Journal, Vol 13 No 1 (2016)
The Lattice Free Energy of QCD with Clover Fermions, up to Three-Loops
Creators: name: Athenodorou, A.
name: Panagopoulos, H.
name: Tsapalis, A.
Publisher: name: arXiv
Year: 2007
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We calculate the perturbative value of the free energy in Lattice QCD, up to three loops. Our calculation is performed using Wilson gluons and the Sheikholeslami - Wolhert (clover) improved action for fermions. The free energy is directly related to the average plaquette. To carry out the calculation, we compute all relevant Feynman diagrams up to 3 loops, using a set of automated procedures in Mathematica; numerical evaluation of the resulting loop integrals is performed on finite lattice, with subsequent extrapolation to infinite size. The results are presented as a function of the fermion mass m, for any SU(N_c) gauge group, and for an arbitrary number of fermion flavors. In order to enable independent comparisons, we also provide the results on a per diagram basis, for a specific mass value.
description: 13 pages, 5 figures, 8 tables
Additional file 1: of ARKS: chromosome-scale scaffolding of human genome drafts with linked read kmers
Creators: name: Coombe, Lauren
name: Zhang, Jessica
name: Vandervalk, Benjamin
name: Chu, Justin
name: Jackman, Shaun
name: Inanc Birol
name: Warren, René
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Evolutionary Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Computational Biology

description: Table S1. Genomic data sources. Table S2. Summary of 10× Genomics Chromium datasets used for assemblies and scaffolding. Table S3. Summary of draft assemblies used for scaffolding with linked reads. Table S4. Contiguity and Quast summary of scaffolding a C. elegans Supernova assembly. Table S5. Contiguity and accuracy of scaffolding a Supernova assembly of the NA12878 individual. Table S6. Reconstruction of the human chromosomes in a baseline and ARKS-scaffolded NA12878 Supernova assembly. Table S7. Baseline ABySS NA24143 contig assembly metrics. Table S8. Contiguity and benchmarking analysis of scaffolding ABySS NA24143 contigs with ARKS. Table S9. Wall clock time and peak memory usage for scaffolding the Supernova C. elegans base assembly with ARKS, ARCS, fragScaff and Architect. Table S10. Wall clock time and peak memory usage for scaffolding the Supernova NA12878 draft assembly with ARKS, ARCS, fragScaff and Architect. Table S11. Wall clock time and peak memory usage for scaffolding the NA24143 Falcon+HiRise draft assembly with ARKS. Table S12. Assembly contiguity and breakpoint analysis of ARKS scaffolding of a Pacbio Falcon assembly scaffolded with Hi-C/HiRise. Figure S1. Gap size estimation in ARKS. Figure S2. ARKS gap distance estimation analysis. (PDF 446 kb)
Combined analysis of weak lensing and X-ray blind surveys
Creators: name: Bergé, Joel
name: Pacaud, Florian
name: Réfrégier, Alexandre
name: Massey, Richard
name: Pierre, Marguerite
name: Amara, Adam
name: Birkinshaw, Mark
name: Paulin-Henriksson, Stéphane
name: Smith, Graham P.
name: Willis, Jon
Publisher: name: arXiv
Year: 2007
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present a joint weak lensing and X-ray analysis of 4 deg$^2$ from the CFHTLS and XMM-LSS surveys. Our weak lensing analysis is the first analysis of a real survey using shapelets, a new generation weak lensing analysis method. We create projected mass maps of the images, and extract 6 weak-lensing-detected clusters of galaxies. We show that their counts can be used to constrain the power spectrum normalisation $σ_8 =0.92_{-0.30}^{+0.26}$ for $Ω_m=0.24$. We show that despite the large scatter generally observed in the M-T relation derived from lensing masses, tight constraints on both its slope and normalisation $M_*$ can be obtained with a moderate number of sources provided that the covered mass range is large enough. Adding clusters from Bardeau et al. (2007) to our sample, we measure $M_* = 2.71_{-0.61}^{+0.79} 10^{14} h^{-1} M_\odot$. Although they are dominated by shot noise and sample variance, our measurements are consistent with currently favoured values, and set the stage for future surveys. We thus investigate the dependence of those estimates on survey size, depth, and integration time, for joint weak lensing and X-ray surveys. We show that deep surveys should be dedicated to the study of the physics of clusters and groups of galaxies. For a given exposure time, wide surveys provide a larger number of detected clusters and are therefore preferred for the measurement of cosmological parameters such as $σ_8$ and $M_*$. We show that a wide survey of a few hundred square degrees is needed to improve upon current measurements of these parameters. More ambitious surveys covering 7000 deg$^2$ will provide the 1% accuracy in the estimation of the power spectrum and the M-T relation normalisations.
description: MNRAS in press Matches accepted version. References updated
SAND: An automated VLBI imaging and analysing pipeline - I. Stripping component trajectories
Creators: name: Zhang, M.
name: Collioud, A.
name: Charlot, P.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Physical sciences

description: We present our implementation of an automated VLBI data reduction pipeline dedicated to interferometric data imaging and analysis. The pipeline can handle massive VLBI data efficiently which makes it an appropriate tool to investigate multi-epoch multiband VLBI data. Compared to traditional manual data reduction, our pipeline provides more objective results since less human interference is involved. Source extraction is done in the image plane, while deconvolution and model fitting are done in both the image plane and the uv plane for parallel comparison. The output from the pipeline includes catalogues of CLEANed images and reconstructed models, polarisation maps, proper motion estimates, core light curves and multi-band spectra. We have developed a regression strip algorithm to automatically detect linear or non-linear patterns in the jet component trajectories. This algorithm offers an objective method to match jet components at different epochs and determine their proper motions.
description: Accepted by MNRAS; 19 pages, 21 figures
Generalizations of Schöbi's Tetrahedral Dissection
Creators: name: Sloane, N. J. A.
name: Vaishampayan, Vinay A.
Publisher: name: arXiv
Year: 2007
Subjects: subject: Metric Geometry (math.MG)
subject: Combinatorics (math.CO)
subject: FOS: Mathematics
subject: 52B45 (Primary), 94A29, 94B60 (Secondary)

description: Let v_1, ..., v_n be unit vectors in R^n such that v_i . v_j = -w for i != j, where -1 = lambda_1 >= ... >= lambda_n >= 0, form a ``Hill-simplex of the first type'', denoted by Q_n(w). It was shown by Hadwiger in 1951 that Q_n(w) is equidissectable with a cube. In 1985, Schöbi gave a three-piece dissection of Q_3(w) into a triangular prism c Q_2(1/2) X I, where I denotes an interval and c = sqrt{2(w+1)/3}. The present paper generalizes Schöbi's dissection to an n-piece dissection of Q_n(w) into a prism c Q_{n-1}(1/(n-1)) X I, where c = sqrt{(n-1)(w+1)/n}. Iterating this process leads to a dissection of Q_n(w) into an n-dimensional rectangular parallelepiped (or ``brick'') using at most n! pieces. The complexity of computing the map from Q_n(w) to the brick is O(n^2). A second generalization of Schöbi's dissection is given which applies specifically in R^4. The results have applications to source coding and to constant-weight binary codes.
description: 20 pages, 8 figures. New version Nov 13 2007: Example 3 rewritten, added references, other small improvements
The use of insecticides to control insect pests
Creators: name: Wojciechowska, M
name: Stepnowski, P
name: Gołębiowski, M
Publisher: name: Invertebrate Survival Journal
Year: 2016

description: Pesticides are used as plants protection products. Among those, insecticides serve as agents to control insects. When incorrectly applied, however these substances may negatively affect people's health and natural environment. Administration routes of insecticides depend on many factors and vary from spraying to fertilizers. These different methods influence how insects prey and how pests develop. Additionally, too frequent use of the same chemicals can lead to development of resistance of insects to these insecticides. In order to prevent occurrence of negative effects of insecticides on surroundings, the effects of these compounds should be studied.
description: Invertebrate Survival Journal, Vol 13 No 1 (2016)
Thirty Years of The Network Scale-up Method
Creators: name: Laga, Ian
name: Bao, Le
name: Niu, Xiaoyue
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: Biotechnology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Ecology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy
subject: Computational Biology

description: Estimating the size of hard-to-reach populations is an important problem for many fields. The network scale-up method (NSUM) is a relatively new approach to estimate the size of these hard-to-reach populations by asking respondents the question, “How many X’s do you know,” where X is the population of interest (e.g., “How many female sex workers do you know?”). The answers to these questions form aggregated relational data (ARD). The NSUM has been used to estimate the size of a variety of subpopulations, including female sex workers, drug users, and even children who have been hospitalized for choking. Within the network scale-up methodology, there are a multitude of estimators for the size of the hidden population, including direct estimators, maximum likelihood estimators, and Bayesian estimators. In this article, we first provide an in-depth analysis of ARD properties and the techniques to collect the data. Then, we comprehensively review different estimation methods in terms of the assumptions behind each model, the relationships between the estimators, and the practical considerations of implementing the methods. We apply many of the models discussed in the review to one canonical dataset and compare their performance and unique features, presented in the supplementary materials. Finally, we provide a summary of the dominant methods and an extensive list of the applications, and discuss the open problems and potential research directions in this area.
Girth-regular graphs
Creators: name: Potočnik, Primož
name: Vidali, Janoš
Publisher: name: arXiv
Year: 2018
Subjects: subject: Combinatorics (math.CO)
subject: FOS: Mathematics
subject: 05C38

description: We introduce a notion of a girth-regular graph as a $k$-regular graph for which there exists a non-descending sequence $(a_1, a_2, \dots, a_k)$ (called the signature) giving, for every vertex $u$ of the graph, the number of girth cycles the edges with end-vertex $u$ lie on. Girth-regularity generalises two very different aspects of symmetry in graph theory: that of vertex transitivity and that of distance-regularity. For general girth-regular graphs, we give some results on the extremal cases of signatures. We then focus on the cubic case and provide a characterisation of cubic girth-regular graphs of girth up to $5$.
description: 20 pages, 6 figures
Tamagawa defect of Euler systems
Creators: name: Buyukboduk, Kazim
Publisher: name: arXiv
Year: 2007
Subjects: subject: Number Theory (math.NT)
subject: FOS: Mathematics
subject: 11G40, 11F80, 11F11, 11R34

description: As remarked in [Kolyvagin systems, by Barry Mazur and Karl Rubin] Proposition 6.2.6 and Buyukboduk[ arXiv:0706.0377v1 ] Remark 3.25 one does not expect the Kolyvagin system obtained from an Euler system for a p-adic Galois representation T to be primitive (in the sense of [Kolyvagin systems, by Barry Mazur and Karl Rubin] Definition 4.5.5) if p divides a Tamagawa number at a prime \ell different from p; thus fails to compute the correct size of the relevant Selmer module. In this paper we obtain a lower bound for the size of the cokernel of the Euler system to Kolyvagin system map (see Theorem 3.2.4 of [Kolyvagin systems, by Barry Mazur and Karl Rubin] for a definition of this map) in terms of the Tamagawa numbers of T, refining [Kolyvagin systems, by Barry Mazur and Karl Rubin] Propostion 6.2.6. We show how this partially accounts for the missing Tamagawa factors in Kato's calculations with his Euler system.
description: 20 pages
High performance NbN nanowire superconducting single photon detectors fabricated on MgO substrates
Creators: name: Marsili, F.
name: Bitauld, D.
name: Fiore, A.
name: Gaggero, A.
name: Mattioli, F.
name: Leoni, R.
name: Benkahoul, M.
name: Levy, F.
Publisher: name: arXiv
Year: 2007
Subjects: subject: Optics (physics.optics)
subject: Instrumentation and Detectors (physics.ins-det)
subject: FOS: Physical sciences

description: We demonstrate high-performance nanowire superconducting single photon detectors (SSPDs) on ultrathin NbN films grown at a temperature compatible with monolithic integration. NbN films ranging from 150nm to 3nm in thickness were deposited by dc magnetron sputtering on MgO substrates at 400C. The superconducting properties of NbN films were optimized studying the effects of deposition parameters on film properties. SSPDs were fabricated on high quality NbN films of different thickness (7 to 3nm) deposited under optimal conditions. Electrical and optical characterizations were performed on the SSPDs. The highest QE value measured at 4.2K is 20% at 1300nm.
Pricing ASICs for Cryptocurrency Mining
Creators: name: Yaish, Aviv
name: Zohar, Aviv
Publisher: name: arXiv
Year: 2020
Subjects: subject: Cryptography and Security (cs.CR)
subject: FOS: Computer and information sciences

description: Cryptocurrencies that are based on Proof-of-Work (PoW) often rely on special purpose hardware to perform so-called mining operations that secure the system, with miners receiving freshly minted tokens as a reward for their work. A notable example of such a cryptocurrency is Bitcoin, which is primarily mined using application specific integrated circuit (ASIC) based machines. Due to the supposed profitability of cryptocurrency mining, such hardware has been in great demand in recent years, in-spite of high associated costs like electricity. In this work, we show that because mining rewards are given in the mined cryptocurrency, while expenses are usually paid in some fiat currency such as the United States Dollar (USD), cryptocurrency mining is in fact a bundle of financial options. When exercised, each option converts electricity to tokens. We provide a method of pricing mining hardware based on this insight, and prove that any other price creates arbitrage. Our method shows that contrary to the popular belief that mining hardware is worth less if the cryptocurrency is highly volatile, the opposite effect is true: volatility increases value. Thus, if a coin's volatility decreases, some miners may leave, affecting security. We compare the prices produced by our method to prices obtained from popular tools currently used by miners and show that the latter only consider the expected returns from mining, while neglecting to account for the inherent risk in mining, which is due to the high exchange-rate volatility of cryptocurrencies. Finally, we show that the returns made from mining can be imitated by trading in bonds and coins, and create such imitating investment portfolios. Historically, realized revenues of these portfolios have outperformed mining, showing that indeed hardware is mispriced.
description: 35 pages, 8 figures, 3 tables
Endogenous versus Exogenous Origins of Diseases
Creators: name: Sornette, D.
name: Yukalov, V. I.
name: Yukalova, E. P.
name: Henry, J. -Y.
name: Schwab, D.
name: Cobb, J. P.
Publisher: name: arXiv
Year: 2007
Subjects: subject: Biological Physics (physics.bio-ph)
subject: Medical Physics (physics.med-ph)
subject: Cell Behavior (q-bio.CB)
subject: FOS: Physical sciences
subject: FOS: Biological sciences

description: Many illnesses are associated with an alteration of the immune system homeostasis due to any combination of factors, including exogenous bacterial insult, endogenous breakdown (e.g., development of a disease that results in immuno suppression), or an exogenous hit like surgery that simultaneously alters immune responsiveness and provides access to bacteria, or genetic disorder. We conjecture that, as a consequence of the co-evolution of the immune system of individuals with the ecology of pathogens, the homeostasis of the immune system requires the influx of pathogens. This allows the immune system to keep the ever present pathogens under control and to react and adjust fast to bursts of infections. We construct the simplest and most general system of rate equations which describes the dynamics of five compartments: healthy cells, altered cells, adaptive and innate immune cells, and pathogens. We study four regimes obtained with or without auto-immune disorder and with or without spontaneous proliferation of infected cells. Over all regimes, we find that seven different states are naturally described by the model: (i) strong healthy immune system, (ii) healthy organism with evanescent immune cells, (iii) chronic infections, (iv) strong infections, (v) cancer, (vi) critically ill state and (vii) death. The analysis of stability conditions demonstrates that these seven states depend on the balance between the robustness of the immune system and the influx of pathogens.
description: 33 pages + 11 figures: final published version
title: The Synoptic Jesus and eschatological violence
Creators: name: Nickel, Jessiah P.
Publisher: name: University of St Andrews
publisherIdentifier: https://ror.org/02wn5qz54
publisherIdentifierScheme: ROR
Year: 2017

description: 	This thesis offers fresh insight into the relationship between violence and eschatology in the Synoptic Gospels’ presentation of Jesus’ life and ministry. It seeks to refute the claims of scholars who have argued that the hypothesis of a violent, seditious Jesus makes the most sense of otherwise incoherent Synoptic passages, by contending that such scholars have not properly understood the role that eschatological expectations played in motivating Second Temple Jewish revolutionary violence, and hence have misread crucial Synoptic passages. The thesis can be divided into three units. First, in chapters two and three, I argue that there were integral connections between violence and eschatology in Second Temple Judaism; demonstrating first the inherently violent components of eschatological writings, then the clearly eschatological elements of major instances of revolutionary violence. Second, in chapters four and five I demonstrate the thematic centrality of Jesus’ opposition to such eschatological violence throughout the Synoptic presentations of his life and ministry. I argue that a proper understanding of violence and eschatology together enables us to see allegedly problematic passages as part of the coherent Synoptic narrative, in which Jesus consistently disassociates eschatological violence from his inauguration of the kingdom of God and his identification of its people. Third, in chapter six I argue that the Synoptic Jesus’ rejection of eschatological violence is closely bound up with the central place of exorcism within his ministry, through which he began to achieve the eschatological goals which many of his contemporaries sought to achieve through revolutionary violence. Therefore, this thesis argues that (i) by understanding the fundamental connections between eschatology and violence within the worldview of Second Temple Judaism, we can understand Jesus’ nonviolence––expressed both in his own practice, and in his commands to his followers––in direct connection with his rejection of the eschatological violence envisioned by many of his contemporaries; and (ii) this forms a central and consistent aspect of the Synoptic presentations of his life and ministry.
title: ALMA-LEGUS. II. The Influence of Subgalactic Environments on Molecular Cloud Properties
Creators: name: Calzetti, Daniela
Publisher: name: University of Massachusetts Amherst
Year: 2024
Subjects: subject: Astrophysics and Astronomy

description: We compare the molecular cloud properties in subgalactic regions of two galaxies, barred spiral NGC 1313, which is forming many massive clusters, and flocculent spiral NGC 7793, which is forming significantly fewer massive clusters despite having a similar star formation rate to NGC 1313. We find that there are larger variations in cloud properties between different regions within each galaxy than there are between the galaxies on a global scale, especially for NGC 1313. There are higher masses, line widths, pressures, and virial parameters in the arms of NGC 1313 and the center of NGC 7793 than in the interarm and outer regions of the galaxies. The massive cluster formation of NGC 1313 may be driven by its greater variation in environment, allowing more clouds with the necessary conditions to emerge, although no one parameter seems primarily responsible for the difference in star formation. Meanwhile NGC 7793 has clouds that are as massive and have as much kinetic energy as the clouds in the arms of NGC 1313, but have densities and pressures more similar to those in the interarm regions and so are less inclined to collapse and form stars. The cloud properties in NGC 1313 and NGC 7793 suggest that spiral arms, bars, interarm regions, and flocculent spirals each represent distinct environments with regard to molecular cloud populations. We see surprisingly little difference in surface density between the regions, suggesting that the differences in surface densities frequently seen between arm and interarm regions in lower-resolution studies are indicative of the sparsity of molecular clouds, rather than differences in their true surface density.
PolyHoop: Soft particle and tissue dynamics with topological transitions
Creators: name: Vetter, Roman
name: Runser, Steve V. M.
name: Iber, Dagmar
Publisher: name: arXiv
Year: 2023
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Biological Physics (physics.bio-ph)
subject: Computational Physics (physics.comp-ph)
subject: FOS: Physical sciences

description: We present PolyHoop, a lightweight standalone C++ implementation of a mechanical model to simulate the dynamics of soft particles and cellular tissues in two dimensions. With only few geometrical and physical parameters, PolyHoop is capable of simulating a wide range of particulate soft matter systems: from biological cells and tissues to vesicles, bubbles, foams, emulsions, and other amorphous materials. The soft particles or cells are represented by continuously remodeling, non-convex, high-resolution polygons that can undergo growth, division, fusion, aggregation, and separation. With PolyHoop, a tissue or foam consisting of a million cells with high spatial resolution can be simulated on conventional laptop computers.
description: 14 pages, 4 figures, 3 tables
Stick-Breaking Processes With Exchangeable Length Variables
Creators: name: Gil–Leyva, María F.
name: Mena, Ramsés H.
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: Biochemistry
subject: Molecular Biology
subject: Biotechnology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Our object of study is the general class of stick-breaking processes with exchangeable length variables. These generalize well-known Bayesian nonparametric priors in an unexplored direction. We give conditions to assure the respective species sampling process is proper and the corresponding prior has full support. For a rich subclass we explain how, by tuning a single[0,1]-valued parameter, the stochastic ordering of the weights can be modulated, and Dirichlet and Geometric priors can be recovered. A general formula for the distribution of the latent allocation variables is derived and an MCMC algorithm is proposed for density estimation purposes.
MOESM1 of A comparison of spatial-based targeted disease mitigation strategies using mobile phone data
Creators: name: Rubrichi, Stefania
name: Smoreda, Zbigniew
name: Musolesi, Mirco
Publisher: name: figshare
Year: 2018
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified

description: Individual-based targeting results. Performance of individual-level isolation based on different spatial indexes for determining targeted individuals (none: no counter measure, random: a portion of individuals isolated randomly, radius of gyration: a portion of individuals isolated based on the value of their radius of gyration, entropy visited places: a portion of individuals isolated based on the value of the entropy of visited sub-prefectures, home staying: a portion of individuals isolated based on the value of the percentage of time spent at home, Progmosis risk: a portion of individuals isolated based on the value of the Progmosis risk model), while varying the percentage of isolated individuals from 1% (top-left) to 10% of the whole population with step length 1, and from 10% to 30% (bottom-right) of the whole population with step length 5. Solid lines represent the average number of infections over the time, dashed lines represent the 95% confidence interval (PDF 233 kB)
title: 02_1621
Creators: name: Wesley Baldwin, John
name: Baldwin, John W.
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2018
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: L'ensemble de ces notes ont été crée par John Baldwin lors d'une de ses premières périodes de résidence à Paris. Ces documents comprennent tous les magistri qu’il avait pu rencontrer dans ses sources. Aux XIIème et XIIIème siècles, les universités n'existant pas encore, le titre de magister s'il évoque certainement une compétence n'est pas rattaché de façon systématique au passage par les écoles. De surcroît, les magistris sont le plus souvent désignés par leur seul prénom. La lecture de ces données est donc difficile et suppose un long travail pour tenter d'identifier un individu auquel on pourrait rattacher plusieurs mentions. John Baldwin avait donc renoncé à utiliser ces données pour donner un prolongement à sa magnifique étude sur les gradués d'université et leur emploi par les Capétiens et les Plantagenêts. Néanmoins, il a conservé ces données et elles sont potentiellement très utile dans le cadre de Studium, comme le sont toutes les mentions dans les volumes des Fasti Ecclesiae Gallicanae de chanoines portant ce titre de magister sans autres précisions. L'ampleur des dépouillements rend ces données très utiles et nous devons une grande reconnaissance à John Baldwin pour avoir pris la peine de faire photocopier ses fiches et de nous les avoir transmises amicalement.
Les données ainsi que les images des fiches sont accessibles sur le site Internet à l'adresse suivante : http://studium-baldwin.lamop.fr/.
Les transcriptions des fiches ont été effectuées par des étudiants de Paris 1 Panthéon - Sorbonne mais elles n'ont pas été corrigées par la suite.
description: Relation: https://lamop.hypotheses.org/
On Light-like Deformations of the Poincaré Algebra
Creators: name: Kuznetsova, Zhanna
name: Toppan, Francesco
Publisher: name: arXiv
Year: 2018
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: We investigate the observational consequences of the light-like deformations of the Poincaré algebra induced by the jordanian and the extended jordanian classes of Drinfel'd twists. Twist-deformed generators belonging to a Universal Enveloping Algebra close nonlinear algebras. In some cases the nonlinear algebra is responsible for the existence of bounded domains of the deformed generators. The Hopf algebra coproduct implies associative nonlinear additivity of the multi-particle states. A subalgebra of twist-deformed observables is recovered whenever the twist-deformed generators are either hermitian or pseudo-hermitian with respect to a common invertible hermitian operator.
description: 18 pages; final version to appear in Eur. Phys. J. C
Large-scale instability in a sheared nonhelical turbulence: formation of vortical structures
Creators: name: Elperin, T.
name: Golubev, I.
name: Kleeorin, N.
name: Rogachevskii, I.
Publisher: name: arXiv
Year: 2007
Subjects: subject: Fluid Dynamics (physics.flu-dyn)
subject: Astrophysics (astro-ph)
subject: Geophysics (physics.geo-ph)
subject: FOS: Physical sciences

description: We study a large-scale instability in a sheared nonhelical turbulence that causes generation of large-scale vorticity. Three types of the background large-scale flows are considered, i.e., the Couette and Poiseuille flows in a small-scale homogeneous turbulence, and the "log-linear" velocity shear in an inhomogeneous turbulence. It is known that laminar plane Couette flow and antisymmetric mode of laminar plane Poiseuille flow are stable with respect to small perturbations for any Reynolds numbers. We demonstrate that in a small-scale turbulence under certain conditions the large-scale Couette and Poiseuille flows are unstable due to the large-scale instability. This instability causes formation of large-scale vortical structures stretched along the mean sheared velocity. The growth rate of the large-scale instability for the "log-linear" velocity shear is much larger than that for the Couette and Poiseuille background flows. We have found a turbulent analogue of the Tollmien-Schlichting waves in a small-scale sheared turbulence. A mechanism of excitation of turbulent Tollmien-Schlichting waves is associated with a combined effect of the turbulent Reynolds stress-induced generation of perturbations of the mean vorticity and the background sheared motions. These waves can be excited even in a plane Couette flow imposed on a small-scale turbulence when perturbations of mean velocity depend on three spatial coordinates. The energy of these waves is supplied by the small-scale sheared turbulence.
description: 12 pages, 14 figures, Phys. Rev. E, in press
Computer- and robot-assisted urological surgery
Creators: name: Troccaz, Jocelyne
Publisher: name: arXiv
Year: 2007
Subjects: subject: Other Computer Science (cs.OH)
subject: Robotics (cs.RO)
subject: FOS: Computer and information sciences

description: The author reviews the computer and robotic tools available to urologists to help in diagnosis and technical procedures. The first part concerns the contribution of robotics and presents several systems at various stages of development (laboratory prototypes, systems under validation or marketed systems). The second part describes image fusion tools and navigation systems currently under development or evaluation. Several studies on computerized simulation of urological procedures are also presented.
title: ADCO, Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Cart. 32 (G 136), 745 folios, f. 0738
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
name: Petot, Frédéric
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: cartulaire
subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Archives départementales de la Côte-d'Or, Cart. 32 (G 136), 745 folios, f. 0738, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Neuvième cartulaire de Saint-Étienne de Dijon (1661 - 1684), Archives départementales de la Côte-d'Or, Cart. 32 (G 136), 745 folios, f. 0738, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https:// manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
Cosmology with Type II Supernovae
Creators: name: Wang, Deng
Publisher: name: arXiv
Year: 2018
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: With the recent progresses on the Type II supernovae, we attempt to investigate whether there does exist new physics beyond the standard cosmological paradigm, i.e., the cosmological constant $Λ$ plus cold dark matter ($Λ$CDM). Constraining four alternative cosmological models with a data combination of currently available Type II supernovae calibrated by the standard color method, Type Ia supernovae, baryon acoustic oscillations, cosmic microwave background and cosmic chronometers, at the $1σ$ confidence level, we find that: (i) a spatially flat universe is supported for the non-flat $Λ$CDM model; (ii) the constrained equation of state of dark energy $ω$ is consistent with the $Λ$CDM hypothesis for the $ω$CDM model where $ω$ is a free parameter; (iii) for the decaying vacuum model, there is no evidence of interaction between dark matter and dark energy in the dark sector of the universe; (iv) there is also no hint of dynamical dark energy for the dark energy density-parametrization scenario. It is very obvious that a larger Type II supernovae sample is required, if we expect to draw definitive conclusions about the formation and evolution of the universe.
description: IJMPD accepted. 4 tables and 5 figures added after addressing the referee's comments
FAIR Sensor Ecosystem: Long-Term (Re-)Usability of FAIR Sensor Data through Contextualization
Creators: name: Bodenbenner, Matthias
name: Pennekamp, Jan
name: Montavon, Benjamin
name: Wehrle, Klaus
name: Schmitt, Robert H.
Publisher: name: Zenodo
Year: 2024

description: Presentation of the publication https://doi.org/10.1109/INDIN51400.2023.10218149 at the IEEE Conference INDIN23.
Additional file 2: of Development, modelling, and pilot testing of a complex intervention to support end-of-life care provided by Danish general practitioners
Creators: name: Winthereik, Anna
name: Neergaard, Mette
name: Jensen, Anders
name: Vedsted, Peter
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology

description: List of ICPC and ICD-10 codes that prompted the pop-up window in the patientâ s medical record. (DOCX 47Â kb)
Stick-breaking processes with exchangeable length variables
Creators: name: Gil–Leyva, María F.
name: Mena, Ramsés H.
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Our object of study is the general class of stick-breaking processes with exchangeable length variables. These generalize well-known Bayesian non-parametric priors in an unexplored direction. We give conditions to assure the respective species sampling process is proper and the corresponding prior has full support. For a rich sub-class we explain how, by tuning a single [0,1]-valued parameter, the stochastic ordering of the weights can be modulated, and Dirichlet and Geometric priors can be recovered. A general formula for the distribution of the latent allocation variables is derived and an MCMC algorithm is proposed for density estimation purposes.
Criteria for the density property of complex manifolds
Creators: name: Kaliman, Shulim
name: Kutzschebauch, Frank
Publisher: name: arXiv
Year: 2007
Subjects: subject: Complex Variables (math.CV)
subject: FOS: Mathematics
subject: 32M05,14R20

description: In this paper we suggest new effective criteria for the density property. This enables us to give a trivial proof of the original Andersén-Lempert result and to establish (almost free of charge) the algebraic density property for all linear algebraic groups whose connected components are different from tori or $\C_+$. As another application of this approach we tackle the question (asked among others by F. Forstnerič) about the density of algebraic vector fields on Euclidean space vanishing on a codimension 2 subvariety.
description: to appear in Invent. Math
The Generalized Oaxaca-Blinder Estimator
Creators: name: Guo, Kevin
name: Basse, Guillaume
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: Medicine
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: After performing a randomized experiment, researchers often use ordinary least-square (OLS) regression to adjust for baseline covariates when estimating the average treatment effect. It is widely known that the resulting confidence interval is valid even if the linear model is misspecified. In this article, we generalize that conclusion to covariate adjustment with nonlinear models. We introduce an intuitive way to use any “simple” nonlinear model to construct a covariate-adjusted confidence interval for the average treatment effect. The confidence interval derives its validity from randomization alone, and when nonlinear models fit the data better than linear models, it is narrower than the usual interval from OLS adjustment.
Goldstone Modes in Renormalizable Supersymmetric SO(10) Model
Creators: name: Bai, Xian-Zheng
name: Zhang, Da-Xin
Publisher: name: arXiv
Year: 2018
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We solve the Goldstone modes in the renormalizable SUSY SO(10) model with general couplings. The Goldstones are expressed by the Vacuum Expectation Values and the Clebsch-Gordan coefficients of relevant symmetries without explicit dependence on the parameters of the model.
description: 27 pages. Only arXiv number for [38] added
Baxterization of GL_q(2) and its application to the Liouville model and some other models on a lattice
Creators: name: Bytsko, A. G.
Publisher: name: arXiv
Year: 2007
Subjects: subject: Quantum Algebra (math.QA)
subject: Exactly Solvable and Integrable Systems (nlin.SI)
subject: FOS: Mathematics
subject: FOS: Physical sciences
subject: 81R50

description: We develop the Baxterization approach to (an extension of) the quantum group GL_q(2). We introduce two matrices which play the role of spectral parameter dependent L-matrices and observe that they are naturally related to two different comultiplications. Using these comultiplication structures, we find the related fundamental R-operators in terms of powers of coproducts and also give their equivalent forms in terms of quantum dilogarithms. The corresponding quantum local Hamiltonians are given in terms of logarithms of positive operators. An analogous construction is developed for the q-oscillator and Weyl algebras using that their algebraic and coalgebraic structures can be obtained as reductions of those for the quantum group. As an application, the lattice Liouville model, the q-DST model, the Volterra model, a lattice regularization of the free field, and the relativistic Toda model are considered.
description: LaTex, 31 pp.; typos corrected, remarks and references added
Pure spinor superspace action for D=6, N=1 super-Yang-Mills theory
Creators: name: Cederwall, Martin
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: A Batalin-Vilkovisky action for D=6, N=1 super-Yang--Mills theory, including coupling to hypermultiplets, is given. The formalism involves pure spinor superfields. The geometric properties of the D=6, N=1 pure spinors (which differ from Cartan pure spinors) are examined. Unlike the situation for maximally supersymmetric models, the fields and antifields (including ghosts) of the vector multiplet reside in separate superfields. The formalism provides an off-shell superspace formulation for matter hypermultiplets, which in a traditional treatment are on-shell.
description: 16 pp
Additional file 1: of Activity seascapes highlight central place foraging strategies in marine predators that never stop swimming
Creators: name: Papastamatiou, Yannis
name: Watanabe, Yuuki
name: UrĹĄka DemĹĄar
name: Vianey Leos-Barajas
name: Bradley, Darcy
name: Langrock, Roland
name: Weng, Kevin
name: Lowe, Christopher
name: Friedlander, Alan
name: Caselle, Jennifer
Publisher: name: figshare
Year: 2018
Subjects: subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Marine Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy

description: Appendix S1. Map of Palmyra atoll and locations of acoustic receivers. (DOCX 645 kb)
Border Thinking Reflexivity in City Schools
Creators: name: Carrillo, Juan F.
name: Karvelis, Noah
Publisher: name: Critical Education
Year: 2023

description: “Red States” in the United States offer an example of the complex intersections of public education, race, conservative politics, language, and power/resistance which teachers live and work amongst. This article considers these intersections by focusing on the experiences and reflections of a former red state teacher and organizer. Following this, the article situates these reflections within border thinking and borderlands work, attempting to theorize the work of red state teachers. In doing so, the theoretical framework of Border Thinking Reflexivity is offered as a potential way of approaching such experiences and developing deeper understandings of the work of teaching in historically red states.
description: Critical Education, Vol. 14 No. 4 (2023)
The Generalized Oaxaca-Blinder Estimator*
Creators: name: Guo, Kevin
name: Basse, Guillaume
Publisher: name: Taylor & Francis
Year: 2021
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Science Policy
subject: Plant Biology

description: After performing a randomized experiment, researchers often use ordinary-least squares (OLS) regression to adjust for baseline covariates when estimating the average treatment effect. It is widely known that the resulting confidence interval is valid even if the linear model is misspecified. In this paper, we generalize that conclusion to covariate adjustment with nonlinear models. We introduce an intuitive way to use any “simple” nonlinear model to construct a covariate-adjusted confidence interval for the average treatment effect. The confidence interval derives its validity from randomization alone, and when nonlinear models fit the data better than linear models, it is narrower than the usual interval from OLS adjustment.