cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
title: Collaboration planning using visual landscape metaphors in group meetings
Creators: name: Illi, Mikko
name: Gustafsson, Robin
name: Masoodian, Masood
Publisher: name: European Society for Socially Embedded Technologies (EUSSET)
Year: 2024
Subjects: subject: Collaboration planning
subject: Group meeting
subject: Landscape metaphors
subject: Visual metaphors
subject: Physical artefacts

description: This poster expands the human-computer interaction perspective of visual metaphors into group meeting contexts to improve collaboration planning in group meetings. We present a study in which the participants used the LEGO® Serious Play® method in group meetings. The meetings were videotaped, and then transcribed and analysed using a thematic analysis method. We used the semantic, cognitive, and material properties of metaphors for this analysis. The analysis produced various coded themes and narratives of collaboration planning centred around the visual metaphor of landscapes. The participants built these landscapes by stacking and connecting LEGO base pieces, to create metaphorical environments in which they placed and linked different stakeholders. Landscape metaphors were alternatively used to centre activities around key persons. This study shows that the use of physical artefacts to create visual landscape metaphors provides an effective method for planning collaborations in group meetings.
Additional file 1: of New insights in the interpretation of array-CGH: autism spectrum disorder and positive family history for intellectual disability predict the detection of pathogenic variants
Creators: name: Cappuccio, Gerarda
name: Vitiello, Francesco
name: Casertano, Alberto
name: Fontana, Paolo
name: Genesio, Rita
name: Bruzzese, Dario
name: Ginocchio, Virginia
name: Mormile, Angela
name: Nitsch, Lucio
name: Andria, Generoso
name: Melis, Daniela
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Medicine
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 60506 Virology
subject: FOS: Biological sciences

description: Supplementary materials. (DOC 36 kb)
Amynthas exiguus subsp. austrinus Gates 1932
Creators: name: Nguyen, Tung T.
name: Nguyen, Anh D.
name: Tran, Binh T. T.
name: Blakemore, Robert J.
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Annelida
Clitellata
Opisthopora
Megascolecidae
Amynthas
Amynthas exiguus
Amynthas exiguus austrinus (gates, 1932)

description: Amynthas exiguus austrinus (Gates, 1932)
Pheretima exigua var. austrina Gates, 1932: 514; 1933: 525.
Pheretima exigua austrina— Gates 1972: 184; Le 1995a: 34; Pham 1995c: 92; Thai 2000a: 308; Huynh 2005a: 117; Huynh et al. 2005: 180; Pham 2010: 63.
Pheretima austrina— Gates 1936: 400; 1939: 82.
Pheretima (Terrata) exigua austrina— Thai 1983: 123.
Amynthas exiguus austrinus— Sims & Easton 1972: 235; Blakemore 2007a: 34; Blakemore 2008b.
Type locality. Myanmar (Toungoo: Leiktho Circle).
Type material. Unknown.
Records from Vietnam. Tuyen Quang (Chiem Hoa); Yen B ai (Luc Yen); Lang Son (Binh Gia); Phu Tho (Xuan Son NP); Da Nang; Quang Nam (Tien Phuoc; Tra My); Kon Tum (Dak Glei); Gia Lai (Buon Luoi); Dak Lak (Yok Don) (Le 1995a; Huynh 2005a; Huynh et al. 2005; Pham 1995c, 2010).
Distribution. Vietnam (Le 1995a), Thailand, Myanmar (Gates 1932, 1939, 1972)
Vietnamese name. Giun nhỏ phưƠng nam.
Remarks. Gates (1939) said that the species was probably endemic in the northern part of the Malay penisula.
Thai (1983) proposed a new subgenus Terrata of the genus Pheretima, and placed the species under the new subgenus.
description: Published as part of Nguyen, Tung T., Nguyen, Anh D., Tran, Binh T. T. & Blakemore, Robert J., 2016, A comprehensive checklist of earthworm species and subspecies from Vietnam (Annelida: Clitellata: Oligochaeta: Almidae, Eudrilidae, Glossoscolecidae, Lumbricidae, Megascolecidae, Moniligastridae, Ocnerodrilidae, Octochaetidae), pp. 1-92 in Zootaxa 4140 (1) on pages 27-28, DOI: 10.11646/zootaxa.4140.1.1, http://zenodo.org/record/256507
Micaria lenzi Bosenberg 1899
Creators: name: Sajadi, Samin Sadat
name: Wesal, Mohammad Wasil
name: Zamani, Alireza
name: Moradmand, Majid
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Gnaphosidae
Micaria
Micaria lenzi

description: 53) Micaria lenzi Bösenberg, 1899 (?)
Records: Imprecise locality.
Distribution: Trans-Palaearctic.
References:
Micaria pallida O. Pickard-Cambridge, 1885: 20 (j).
Micaria lenzi: Marusik & Omelko, 2019: 288, fig. 1I, 8A–D (♂, synonymy of M. pallida).
Comments: For comments on the type locality of M. pallida (Yarkand (Sirikol), Afghanistan or Tajikistan), see Simmons & Marusik (2022).
description: Published as part of Sajadi, Samin Sadat, Wesal, Mohammad Wasil, Zamani, Alireza & Moradmand, Majid, 2024, A checklist of the spiders (Arachnida: Araneae) of Afghanistan, pp. 1-50 in Zootaxa 5551 (1) on page 14, DOI: 10.11646/zootaxa.5551.1.1, http://zenodo.org/record/14389939
Additional file 2: of Stakeholdersâ   views on the ethical challenges of pragmatic trials investigating pharmaceutical drugs
Creators: name: Kalkman, Shona
name: Thiel, Ghislaine Van
name: Grobbee, Diederick
name: Anna-Katharina Meinecke
name: Zuidgeest, Mira
name: Delden, Johannes Van
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Consolidated criteria for reporting qualitative research (COREQ) checklist. (DOCX 23 kb)
Additional file 2: of Genomic analysis of the multi-host pathogen Erysipelothrix rhusiopathiae reveals extensive recombination as well as the existence of three generalist clades with wide geographic distribution
Creators: name: Forde, Taya
name: Biek, Roman
name: Zadoks, Ruth
name: Workentine, Matthew
name: Buck, Jeroen De
name: Kutz, Susan
name: Opriessnig, Tanja
name: Trewby, Hannah
name: Meer, Frank Van Der
name: Orsel, Karin
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Supplementary figures. Figure S1. Erysipelothrix rhusiopathiae core genome. Core genes were plotted against the E. rhusiopathiae Fujisawa reference genome using GView, filtering out low-complexity sequences (e.g. repetitive regions). Bacteriophage sequences in the annotated reference genome and core genes associated with bacterial competence are highlighted. Publicly available E. rhusiopathiae isolates and de novo assembled isolates whose average depth of coverage was greater than 15X were included in this analysis. Figure S2. Recombinant fragments estimated in the Erysipelothrix rhusiopathiae core genome using BratNextGen. Presence of the same color block across multiple isolates within a column represents acquisition of the same recombinant segment; otherwise colors are arbitrary. Figure S3. Recombinant fragments in Clades 1, 2 and 3 respectively, estimated in Gubbins. Red blocks are recombinant fragments that have been inherited by multiple isolates, while blue fragments are unique to that isolate. Figure S4. Population subgroup assignment of Erysipelothrix rhusiopathiae isolates during chromosome painting using ChromoPainter/fineSTRUCTURE as shown in Fig.Â 4. Figure S5. Homoplasy associated with Erysipelothrix rhusiopathiae serotyping. This figure shows examples of homoplasy in serotypes 1a, 2 and 5, based on the same phylogenetic tree shown in Fig.Â 3. Labelled arrows show the locations of isolates of the different serotypes. Serotype was previously determined for all isolates shown here except VI11-2_Lu, which was serotyped in this study. Figure S6. Data analysis pipeline. (PDF 695Â kb)
Additional file 8: Table S4. of Statistical evaluation of methods for identification of differentially abundant genes in comparative metagenomics
Creators: name: Jonsson, Viktor
name: Österlund, Tobias
name: Nerman, Olle
name: Kristiansson, Erik
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: The full area under curve estimates at different gene abundances for all 14 methods. Higher values represent higher gene ranking performance. The results are calculated based on 100 resampled metagenomes. The Wilcoxon-Mann–Whitney test was not evaluated at the smallest sample size (3 + 3) due to lack of samples. (DOCX 12 kb)
Amynthas exiguus subsp. chomontis
Creators: name: Nguyen, Tung T.
name: Nguyen, Anh D.
name: Tran, Binh T. T.
name: Blakemore, Robert J.
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Annelida
Clitellata
Opisthopora
Megascolecidae
Amynthas
Amynthas exiguus
Amynthas exiguus chomontis

description: Amynthas exiguus chomontis (Thai & Samphon, 1988)
Pheretima exigua chomontis Thai & Samphon, 1988: 18; Samphon 1990: 81; Nguyen 1994: 49; Thai 2000a: 308; Huynh & Nguyen 2004a: 115; Pham 2010: 63.
Amynthas exiguus chomontis— Blakemore 2007a: 34; Blakemore 2008b.
Type locality. Laos (Se Pon).
Type material. SORC, Vietnam.
Records from Vietnam. Hanoi (Ba Vi NP); Thua Thien Hue (Huong Thuy; Phu Loc); Da Nang (Ba Na NP) (Nguyen 1994; Huynh & Nguyen 2004a; Pham 2010).
Distribution. Vietnam; Laos (Samphon, 1990).
Vietnamese name. Giun nhỏ núi cho.
Remarks. Blakemore (2007a) considered it as " species inquirenda; further examination was not possible because all previously collected material has been lost.
description: Published as part of Nguyen, Tung T., Nguyen, Anh D., Tran, Binh T. T. & Blakemore, Robert J., 2016, A comprehensive checklist of earthworm species and subspecies from Vietnam (Annelida: Clitellata: Oligochaeta: Almidae, Eudrilidae, Glossoscolecidae, Lumbricidae, Megascolecidae, Moniligastridae, Ocnerodrilidae, Octochaetidae), pp. 1-92 in Zootaxa 4140 (1) on page 28, DOI: 10.11646/zootaxa.4140.1.1, http://zenodo.org/record/256507
Additional file 1: Table S1. of MOG-induced experimental autoimmune encephalomyelitis in the rat species triggers anti-neurofascin antibody response that is genetically regulated
Creators: name: Flytzani, Sevasti
name: Guerreiro-Cacais, Andre
name: NâDiaye, Marie
name: Lindner, Maren
name: Linington, Christopher
name: Meinl, Edgar
name: Stridh, Pernilla
name: Jagodic, Maja
name: Olsson, Tomas
Publisher: name: Figshare
Year: 2015
Subjects: subject: Neuroscience
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: 111714 Mental Health
subject: FOS: Health sciences

description: EAE clinical characteristics and antibody specific IgG at different time points in MOG-immunized DA rats. (DOCX 28 kb)
Eukoenenia zariquieyi Conde 1951, stat. nov.
Creators: name: Mayoral, J. G.
name: Barranco, P.
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Palpigradi
Eukoeneniidae
Eukoenenia
Eukoenenia zariquieyi

description: Eukoenenia zariquieyi (Condé, 1951) stat. nov.
Condé (1951) described the subspecies Eukoenenia draco zariquieyi (Condé, 1951) from a single female collected in Salitre Cave, Montserrat (Barcelona). However, its assignment to E. draco was regarded as uncertain by Condé (1998). In view of the importance of the differences from E. draco, we here elevate Eukoenenia zariquieyi stat. nov. to full species rank.
Comparison of the measurements obtained for both species (Table 1) indicates that E. draco has much longer segments, about three times longer than those of E. zariquieyi, e.g. bta IV 310–336 vs. 78, ti IV 325–341 vs. 78. This is also clear from the ratios between the lengths of the tibiae of three appendages and the total length of the specimens (0.18–0.20 vs. 0.06–0.07). Thus it is possible to clearly differentiate the two species by morphometric data alone.
According to the discussion presented in the section below, regarding the high variability of setae on the sternites, it is difficult to separate the two species based solely on the chaetotaxy. However, the most frequent combination of setae on sternites IV–VI in E. draco is 13 on each segment (including the type). The description of Condé (1951) indicates that the single specimen of E. zariquieyi shows 12, 12 and 10 setae, respectively. The best way to differentiate these two species using the sternal chaetotaxy is by looking at the setae on sternite VI: E. draco usually carries on each side 4–5 a setae (a1–4 or a1–5) plus two s setae (s1–2) (total 13–14 setae), whereas E. zariquieyi carries only 3 a setae (a1–3) plus two s setae (total 10 setae).
The disposition and insertion of the stiff seta (r) on Ibta3 is similar in the two species, although they differ in relation to the length of their tergal edges, those E. draco being much longer. Condé (1951) did not provide a figure of IVbta when describing zariquieyi, but one was later provided by Condé (1977). The arrangement of the setae along the segment is similar, but as mentioned before their lengths differ considerably.
description: Published as part of Mayoral, J. G. & Barranco, P., 2013, Rediscovery of the troglobious palpigrade Eukoenenia draco (Peyerimhoff 1906) (Palpigradi: Eukoeneniidae), with notes on the adaptations to a cave-dwelling life, pp. 174-184 in Zootaxa 3635 (2) on page 181, DOI: 10.11646/zootaxa.3635.2.5, http://zenodo.org/record/216172
An experimental study of two multi-fluid flows of interest to the oilfield cementing industry
Creators: name: Malekmohammadi, Sardar
Publisher: name: University of British Columbia
Year: 2009

description: In this work two multi-fluid flows are studied. In the first project, displacement flows in an eccentric annulus were studied experimentally. Displacement flows occur in the oil and gas industry during well construction when drilling mud is displaced by a cement slurry. To remove mud effectively, it is important to design the fluid rheology so that a steady displacement front can be achieved when displacing along an eccentric annulus. In our research, we have investigated the effects of viscosity, density and eccentricity of inner pipe on the interface dynamics. An experimental matrix is devised in a manner to capture the boundary between steady and unsteady displacements for specific pairs of fluids, and to compare against previously published models. Reasonable qualitative agreement was achieved however a systematic discrepancy was observed due to the presence of secondary flows and dispersion in the experiments. These effects have not been studied carefully so far and more sophisticated models are needed to predict this type of flow. In the second project, slumping flows of two non-Newtonian fluids in horizontal closed pipes were studied. This type of flow occurs during the abandonment of horizontal oil and gas wells, when sealing the well through the setting of cement plugs. We have studied the effects of changes in density difference and of small deviations from a perfectly horizontal inclination. The effects of these parameters on the slump length versus time were analyzed. Comparison of numerical and experimental results shows broadly similar trends, but with some qualitative differences also observed, possibly due to interfacial effects
title: The Overlook of Maintenance Practices in the Digitalization of Railway Maintenance Records
Creators: name: Lauferon, Alexis
name: Lewkowicz, Myriam
Publisher: name: European Society for Socially Embedded Technologies (EUSSET)
Year: 2024
Subjects: subject: Maintenance work
subject: Railway maintenance
subject: Digital transformation
subject: Digital records

description: We present an ethnographic study of railway maintenance work, with a focus on digitalized maintenance records. This on-going research is taking place in a small private railway maintenance company in the south of France for two years. We describe the integration of maintenance records in a wide material environment, and the evolution from filling in these records on paper to smartphones. This research brings some nuance on the beneficial effects of the 'digital transformation' in this industry, and shows how the workers compensate for the overlook of their practices in the design of the digital records.
Additional file 12: Figure S8. of Statistical evaluation of methods for identification of differentially abundant genes in comparative metagenomics
Creators: name: Jonsson, Viktor
name: Österlund, Tobias
name: Nerman, Olle
name: Kristiansson, Erik
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: The ability to control the false discovery rate for the remaining methods. The figure shows boxplots of the number of true positives (panel a, d), the number of false positives (panel b, e) and achieved true FDR (panel c, f) at a cutoff of 0.05 estimated FDR. Panels a-c show results for the Qin dataset and panels d-f show results for the Yatsunenko dataset. The group sizes were set to 6 + 6 and the effect size to 5. The results were based on 100 resampled metagenomes. The included methods are the t-test using the square root transform (sqrtT), the t-test using log transform (logT), the non-transformed pooled t-test (tTest), Welch’s test (Welch), Wilcoxon-Mann–Whitney test (WMW), the binomial test (binomial), the non-overdispersed Poisson generalized linear model (GLM) and Fisher’s exact test (Fisher). (PDF 117 kb)
title: Towards a better quality of life at work: How to collectively define digital communication conventions
Creators: name: Roccamatisi, Romain
name: Lewkowicz, Myriam
name: Gauducheau, Nadia
Publisher: name: European Society for Socially Embedded Technologies (EUSSET)
Year: 2024
Subjects: subject: Digital communication
subject: Conventions
subject: Nomadic workers
subject: Work practices
subject: Quality of life at work

description: The consumption of digital services has increased and has negative effects on the quality of life at work and even on the health of employees. Some solutions, such as charters, have been considered to address these problems and standardize practices. However, these solutions are often rigid and not aligned with work practices. As a result, they are little or not used at all. Faced to these findings, we are interested in studying existing practices of defining digital communication conventions in an organization. This poster presents an ongoing case study within a French national public agency where most of the agents are nomadic workers. We are intended at involving these workers so that they can collectively negotiate conventions and dynamically handle these conventions to make possible an evolution of their work practices.
Belisana tauricornis Thorell 1898
Creators: name: Yao, Zhiyuan
name: Tavano, Maria
name: Li, Shuqiang
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Pholcidae
Belisana
Belisana tauricornis

description: Belisana tauricornis Thorell, 1898
Figs 1–2
Belisana tauricornis Thorell 1898: 278. Deeleman-Reinhold 1986: 46. Huber 2005: 12. Uthina tauricornis Simon 1903: 988.
Type material examined. Syntypes: 1 male and 4 females (MSNG; opisthosoma lost in one female), Bhamo, Myanmar, 1885–1889, L. Fea leg.
Diagnosis. The species resembles B. sarika Huber, 2005, but can be distinguished by details of pedipalpal morphology (Figs 1 A–D and 2B; presence of a long ventral apophysis on trochanter, presence of a dorsal apophysis on femur, different shape of procursus, and short, hooked bulbal apophysis) and female genitalia (Figs 2 A, C; different shape of epigynum in ventral view, different position of epigynal pockets, and long, bent pore plates).
Redescription. Male (syntype): Total length 1.66 (1.72 with clypeus), prosoma 0.57 long, 0.61 wide, opisthosoma 1.09 long, 0.58 wide. Femur I: 3.50 (other segments lost), leg III: – (1.56 + 0.20 + 1.31 + – + –), legs II and IV lost. Dorsal shield of prosoma brownish; ocular area yellowish; clypeus yellowish, with two paratactic, horn-shaped apophysis; sternum grey. Opisthosoma pale, without spots. Distance PME-PME 0.13; diameter PME 0.07; distance PME-ALE 0.01. Ocular area not elevated. No thoracic furrow. Sternum as long as wide (0.45). Chelicerae as in Fig. 2 D, with pair of thumb-shaped apophyses proximally, and pair of long, curved apophyses distally (distance between tips: 0.43). Pedipalpi as in Figs 1 A–B; trochanter with a long ventral apophysis provided with a thumb-shaped apophysis retrolaterally; femur with a dorsal apophysis retrolaterally; procursus simple proximally but complex distally, with a retrolatero-dorsal membranous flap; bulb with a simple embolus and a short, hooked apophysis (Fig. 2 B).
Female (syntype): Similar to male. One of the specimens measured as: Total length 1.50 (1.61 with clypeus), prosoma 0.56 long, 0.59 wide, opisthosoma 0.94 long, 0.55 wide. Legs I and II lost, leg III: 4.99 (1.45 + 0.20 + 1.19 + 1.64 + 0.51), leg IV: 7.36 (2.19 + 0.23 + 1.91 + 2.44 + 0.59). Distance PME-PME 0.13; diameter PME 0.07; distance PME-ALE 0.01. Clypeus unmodified. Epigynum (Fig. 2 A) simple and flat externally, with dark internal shade and pair of pockets. Vulva (Fig. 2 C) with a wavy, sclerotized arch anteriorly and two long, bent pore plates.
Distribution. Myanmar (Bhamo).
description: Published as part of Yao, Zhiyuan, Tavano, Maria & Li, Shuqiang, 2013, Notes on four pholcid spiders (Araneae: Pholcidae) described by T. Thorell from Southeast Asia, pp. 302-310 in Zootaxa 3609 (3) on page 303, DOI: 10.11646/zootaxa.3609.3.4, http://zenodo.org/record/216177
Pholcus gracillimus Thorell 1890
Creators: name: Yao, Zhiyuan
name: Tavano, Maria
name: Li, Shuqiang
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Pholcidae
Pholcus
Pholcus gracillimus

description: Pholcus gracillimus Thorell, 1890
Fig. 3
Pholcus gracillimus Thorell 1890: 298. Workman 1896: pl. 71, figs a–g. Simon 1905: 55. Huber 2011: 283, figs 1360, 1394–1395 and 1420–1424 (misidentification).
Type material examined. Holotype: Male (MSNG), Sungei Bulu, Sumatra, Indonesia, September 1878, O. Beccari leg.
Diagnosis. The species resembles P. fragillimus Strand, 1907, but can be distinguished by details of pedipalpal morphology (Figs 3 A–D; absence of dorsal elongations on tarsus, different shapes of procursus and appendix).
Redescription. Male (holotype): Total length 4.68 (4.87 with clypeus), prosoma 1.01 long, 1.05 wide, opisthosoma 3.67 long, 0.71 wide. Leg I lost, leg II: – (6.60 + 0.51 + 5.77 + – + –), leg III: 15.90 (4.81 + 0.45 + 3.78 + 5.77 + 1.09), leg IV: 23.19 (6.54 + 0.50 + 5.32 + 8.27 + 2.56). Dorsal shield of prosoma, ocular area, clypeus, legs and opisthosoma yellowish, but marks beyond recognition; sternum brown. Opisthosoma with a brown, median stripe ventrally. Distance PME-PME 0.18; diameter PME 0.17; distance PME-ALE 0.02; distance AME-AME 0.06; diameter AME 0.07. Ocular area elevated; each eye triad on top of a relatively shorter eye-stalk directed towards laterally. No thoracic furrow. Sternum wider than long (0.69/0.63). Chelicerae with pair of black apophyses distally provided with two modified hairs each, pair of unsclerotized thumb-shaped apophyses proximolaterally, and two pairs of frontal apophyses. Pedipalpi as in Figs 3 A–B; trochanter with a long retrolateroventral apophysis; femur with a dorsal apophysis retrolaterally; procursus simple proximally but complex distally, with membranous and sclerotized elements and a long, dorsal spine; uncus with a scaly edge; appendix bent, with a branch medially and scales distally; embolus weakly sclerotized, with some transparent projections. Leg hairs lost. Distribution. Indonesia (Sumatra).
Remarks. The procursus, uncus and appendix of Huber’s (2011) P. gracillimus strikingly differ from those of the MSNG holotype. Thus, we consider Huber’s P. gracillimus a misidentification. Future work may confirm that Huber’s P. gracillimus is a new species. In addition, the MSNG holotype is extremely similar to P. kohi Huber, 2011 in having two pairs of frontal apophyses on the male chelicerae, a dorsal apophysis on the pedipalpal femur, and similar shapes of procursus, uncus and appendix, and the locality of the MSNG holotype is within the range of the latter. We have not seen the type specimens of P. k o h i, but we consider P. kohi dubious.
description: Published as part of Yao, Zhiyuan, Tavano, Maria & Li, Shuqiang, 2013, Notes on four pholcid spiders (Araneae: Pholcidae) described by T. Thorell from Southeast Asia, pp. 302-310 in Zootaxa 3609 (3) on pages 303-305, DOI: 10.11646/zootaxa.3609.3.4, http://zenodo.org/record/216177
Amynthas exiguus subsp. taybacanus
Creators: name: Nguyen, Tung T.
name: Nguyen, Anh D.
name: Tran, Binh T. T.
name: Blakemore, Robert J.
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Annelida
Clitellata
Opisthopora
Megascolecidae
Amynthas
Amynthas exiguus
Amynthas exiguus taybacanus (thai, 1984)

description: Amynthas exiguus taybacanus (Thai, 1984)
Pheretima exigua taybacana Thai, 1984b: 616, fig. 2B; Do: 1994: 75; Le 1995a: 34; Thai 2000a: 308; Huynh & Nguyen 2004a: 115; Huynh et al. 2005: 180.
Pheretima (Terrata) exigua taybacana— Thai 1983: 123.
Amynthas exiguus taybacanus— Blakemore 2007a: 34; Blakemore 2008b.
Type locality. Vietnam (Ninh Binh: Cuc Phuong NP).
Type material. ZMUM (W.237), Russia.
Records from Vietnam. Cao Bang (Thach An); Lang Son; Thai Nguyen (Dinh Hoa); Bac Giang; Hanoi (Ba Vi NP); Ninh Binh (Cuc Phuong NP); Hoa Binh (Mai Chau); Son La (Moc Chau); Phu Tho (Xuan Son NP); Nghe An (Que Phong) (Thai 1984b; Do 1994; Le 1995a; Huynh & Nguyen 2004a; Huynh et al. 2005).
Distribution. Only known from Vietnam.
Vietnamese name. Giun nhỏ tây bắc.
Remarks. Thai (1983) proposed a new subgenus Terrata of the genus Pheretima, and placed the species under the new subgenus. Blakemore (2007a, 2008b) considered it as " species inquirenda ", further examination was not possible because all previously collected material has been lost.
description: Published as part of Nguyen, Tung T., Nguyen, Anh D., Tran, Binh T. T. & Blakemore, Robert J., 2016, A comprehensive checklist of earthworm species and subspecies from Vietnam (Annelida: Clitellata: Oligochaeta: Almidae, Eudrilidae, Glossoscolecidae, Lumbricidae, Megascolecidae, Moniligastridae, Ocnerodrilidae, Octochaetidae), pp. 1-92 in Zootaxa 4140 (1) on page 28, DOI: 10.11646/zootaxa.4140.1.1, http://zenodo.org/record/256507
Additional file 1: Table S1. of Mortality trends in U.S. adults with septic shock, 2005-2011: a serial cross-sectional analysis of nationally-representative data
Creators: name: Goto, Tadahiro
name: Yoshida, Kazuki
name: Tsugawa, Yusuke
name: Filbin, Michael
name: Camargo, Carlos
name: Hasegawa, Kohei
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: Medicine
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Computational Biology

description: International Classification of Diseases, Ninth Revision, Clinical Modification codes for major causes of sepsis. Table S2. Patient and hospital characteristics in the subgroup with vasopressor use, 2005-2011. Table S3. Patient and hospital characteristics in the subgroup without vasopressor use, 2005-2011. Table S4. Unadjusted mortality among patients hospitalized for septic shock in the US, 2005-2011. Table S5. Odds ratio of inhospital mortality in patients hospitalized for septic shock in the US, 2005-2011.
title: Istanbuler Mitteilungen, Bd. 64 (2014): Istanbuler Mitteilungen
title: Istanbuler Mitteilungen
titleType: AlternativeTitle
Creators: name: Istanbuler Mitteilungen
Publisher: name: Istanbuler Mitteilungen
Year: 2024

description: [PDFs verfügbar]
description: Chemical Characterization of Roman and Early Byzantine Glass from Boğazköy/Hattuša and its Vicinity...237–260
Die Gefäßkonstruktion zweier hethitischer Schwerter aus den mykenischen Gräbern vom Değirmentepe bei Milet...223–236
Die Glyptik des 2. Jahrtausends v. Chr. aus Giricano am Oberen Tigris...195–203
Hethitische Funde im Museum von Konya Ereğli und ihre Bedeutung für die hethitische Präsenz in dieser Region...207–221
İnarası – Ein neuer chalkolithischer Fundplatz im pisidischen Bergland...181–193
Kein Kaiserkult...163–178
Latène-Artefakte im hellenistischen Kleinasien: ein problematisches Kriterium für die Bestimmung der ethnischen Identität(en) der Galater...129–162
Vom Palladion zur Nikephoros...75–128
Between Continuity and Change: Northern Pisidia through Classical and Late Antiquity...57–73
The First Evaluation on the Distribution of Commercial Amphoras from Lycia in the Pre-Roman Period...33–56
In Memoriam Klaus Schmidt...25–32
In Memoriam Halet Çambel...15–23
In Memoriam Peter Neve...7–13
Micaria lindbergi Roewer 1962
Creators: name: Sajadi, Samin Sadat
name: Wesal, Mohammad Wasil
name: Zamani, Alireza
name: Moradmand, Majid
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Gnaphosidae
Micaria
Micaria lindbergi

description: 54) Micaria lindbergi Roewer, 1962 *
Records: Ghor: [Gho2].
Distribution: Afghanistan.
References:
Micaria lindbergi Roewer, 1962a: 12, fig. 90 (♀).
Micaria rossica: Wunderlich 1980: 308 (synonymy of M. lindbergi, tentative).
description: Published as part of Sajadi, Samin Sadat, Wesal, Mohammad Wasil, Zamani, Alireza & Moradmand, Majid, 2024, A checklist of the spiders (Arachnida: Araneae) of Afghanistan, pp. 1-50 in Zootaxa 5551 (1) on page 14, DOI: 10.11646/zootaxa.5551.1.1, http://zenodo.org/record/14389939
Spermophora thorelli Roewer 1942
Creators: name: Yao, Zhiyuan
name: Tavano, Maria
name: Li, Shuqiang
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Pholcidae
Spermophora
Spermophora thorelli

description: Spermophora thorelli Roewer, 1942
Fig. 5
Spermophora maculata Thorell 1898: 276 (preoccupied).
Spermophora thorelli Roewer 1942: 346 (replacement name).
Type material examined. Holotype: Female (MSNG), Bhamo, Myanmar, 1885–1889, L. Fea leg.
Diagnosis. The species can be distinguished from all known congeners by details of female genitalia (Figs 5 A–B; presence of distinct, anterior marks on epigynum in ventral view, different position of epigynal pockets, different shape of sclerotized arch, and long pore plates).
Redescription. Female (holotype): Total length 1.65 (1.77 with clypeus), prosoma 0.63 long, 0.70 wide, opisthosoma 1.02 long, 0.79 wide. Leg I: – (2.55 + 0.31 + 2.53 + – + –), leg II: – (1.84 + 0.27 + 1.55 + – + –), leg III: 4.95 (1.41 + 0.23 + 1.13 + 1.59 + 0.59), leg IV: – (2.01 + 0.24 + 1.63 + – + –); tibia I L/d: 35. Dorsal shield of prosoma, ocular area, clypeus and legs yellowish, but marks beyond recognition; sternum light brownish. Opisthosoma pale grey, with spots dorsally and laterally. Distance PME-PME 0.06; diameter PME 0.10; distance PME-ALE 6 μm. Ocular area slightly elevated. No thoracic furrow, only median dark line. Sternum wider than long (0.47/0.45). Epigynum (Fig. 5 A) simple and weakly protruding, with distinct marks anteriorly and pair of pockets posteriorly. Vulva (Fig. 5 B) with a rainbow-shaped, sclerotized arch anteriorly and two long pore plates. Leg hairs lost.
Distribution. Myanmar (Bhamo).
description: Published as part of Yao, Zhiyuan, Tavano, Maria & Li, Shuqiang, 2013, Notes on four pholcid spiders (Araneae: Pholcidae) described by T. Thorell from Southeast Asia, pp. 302-310 in Zootaxa 3609 (3) on pages 307-309, DOI: 10.11646/zootaxa.3609.3.4, http://zenodo.org/record/216177
Amynthas exilisarius subsp. exilisarius
Creators: name: Nguyen, Tung T.
name: Nguyen, Anh D.
name: Tran, Binh T. T.
name: Blakemore, Robert J.
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Annelida
Clitellata
Opisthopora
Megascolecidae
Amynthas
Amynthas exilisarius
Amynthas exilisarius exilisarius (thai, 1984)

description: Amynthas exilisarius exilisarius (Thai, 1984)
Pheretima exilisaria Thai, 1984a: 286, fig. 1B; Le 1995a: 39; Nakamura 1999: 20; Thai 2000a: 308; Huynh & Nguyen 2004a: 115; Huynh et al. 2005: 180.
Pheretima (Terrata) exilisaria— Thai 1983: 123.
Amynthas exilisarius exilisarius— Blakemore 2007a: 35; Blakemore 2008b.
Type locality. Vietnam (Hanoi: Soc Son).
Type material. ZMUM (W.214), Russia.
Examined material. 1 C (SORC-V.045.01) forest at elevation of 900m a.s.l., Tam Quan, Tam Dao, Vinh Phuc, 19/4/1984.
Records from Vietnam. Vinh Phuc (Tam Dao); Hanoi (Soc Son; Ba Vi NP); Phu Tho (Xuan Son NP) (Thai 1984a; Le 1995a; Huynh & Nguyen 2004a; Huynh et al. 2005).
Distribution. Only known from Vietnam.
Remarks. Thai (1983) proposed a new subgenus Terrata of the genus Pheretima, and placed the species under the new subgenus. Blakemore (2007a, 2008b) considered it as " species inquirenda ". Material was re-examined and absence of male copulatory pouches and hence placement of the species in Amynthas is confirmed here.
Amynthas exilisarius ngheanae (Do & Tran, 1994)
Pheretima exilisaria ngheanae Do & Tran, 1994 (in: Do et al. 1994): 24, fig. 1C; Do 1994: 76; Thai 2000a: 308. Amynthas exilisarius ngheanae— Blakemore 2007a: 35; Blakemore 2008b.
Type locality. Vietnam (Nghe An: Que Phong).
Type material. SORC, Vietnam.
Examined material. 3 C, 4 A (SORC-V.046.01), and 3 C (CTU-EW.059.01) near stream on the footprint of Bu Coi Mts, Chau Phong, Quy Chau, Nghe An, 15/5/1988, coll. Tran Minh Khoi; 8 C (SORC-V.046.02) primary forest, Tri Le, Que Phong, 20/12/1987, coll. Tran Minh Khoi.
Records from Vietnam. Nghe An (Que Phong; Quy Chau) (Do 1994).
Distribution. Only known from Vietnam.
Remarks. Blakemore (2007a, 2008b) considered it as " species inquirenda ". Material was re-examined and absence of male copulatory pouches and hence placement of the species in Amynthas is confirmed here.
description: Published as part of Nguyen, Tung T., Nguyen, Anh D., Tran, Binh T. T. & Blakemore, Robert J., 2016, A comprehensive checklist of earthworm species and subspecies from Vietnam (Annelida: Clitellata: Oligochaeta: Almidae, Eudrilidae, Glossoscolecidae, Lumbricidae, Megascolecidae, Moniligastridae, Ocnerodrilidae, Octochaetidae), pp. 1-92 in Zootaxa 4140 (1) on pages 28-29, DOI: 10.11646/zootaxa.4140.1.1, http://zenodo.org/record/256507
Molecular evolution of the eukaryotic translation elongation factor, EFL
Creators: name: Gile, Gillian Heather
Publisher: name: University of British Columbia
Year: 2009

description: The eukaryotic translation elongation factor EFL (for EF-Like) is a paralogue of the better-known elongation factor 1-alpha (EF-1α), which brings aminoacyl-tRNAs to the ribosome during translation. This essential protein was thought to be ubiquitous in eukaryotes until the recent discovery of EFL in a small number of diverse, mainly unicellular, eukaryotic organisms that were found to lack EF-1α. Because of the great evolutionary distances between EFL-encoding lineages and the near mutual exclusivity of the two proteins, the observed complex distribution of EFL was initially attributed entirely to multiple lateral gene transfers. In the enclosed chapters, the distribution of EFL was characterized in more detail in four distantly related eukaryotic lineages at both fine and broad taxonomic scales in order to better understand the effects that endosymbiotic gene transfer, differential loss, and lateral gene transfer have had on the molecular evolution of EFL. Endosymbiotic transfer of EFL was detected in the chlorarachniophytes, a group of algae whose secondary plastids retain a vestigial nucleus, known as a nucleomorph, in their reduced eukaryotic cytoplasm, known as the periplastid compartment (PPC). The endosymbiotically transferred EFL carries a bipartite targeting sequence similar to those of plastid-targeted proteins in this group and to plastid- and PPC-targeting sequences in cryptomonads to direct it to the PPC, suggesting similarities in the way these two lineages have solved their shared challenge of targeting to complex plastids with nucleomorphs. No clear phylogenetic evidence for lateral transfer of EFL has yet emerged; rather, differential loss of EFL and EF-1α from an ancestral state of co-occurrence was characterized in euglenozoans and detected in publicly available data from heterokonts and opisthokonts, unexpectedly revealing a significant role for this process in shaping the complex distribution of EFL and EF-1α. This finding serves as a cautionary reminder that adequate taxon sampling and a robust organismal phylogenetic hypothesis are crucial in order to correctly infer lateral gene transfer.
Implant surface topography modulates macrophage morphology and subsequent signaling cascades
Creators: name: Ghrebi, Salem
Publisher: name: University of British Columbia
Year: 2009

description: Implant surface topography is a major determinant in the success of dental implants. The objective of this thesis was to investigate macrophage responses to implant surface topography in vitro and in vivo. The in vitro studies investigated the effects of surface topography on the RAW 264.7 macrophage cell line’s morphology and signaling over time. Cells plated on surfaces of varying degrees of roughness responded with specific topography-directed time-dependent changes in cell morphology. These changes were accompanied by alterations in F-actin and vinculin organization and localization. Activation of focal adhesion kinase (FAK), proto-oncogenic tyrosine kinase (Src), and extracellular signal-regulated kinases1/2 (ERK 1/2) signaling molecules were also found to be both surface topography and time dependent. Phosphorylation of FAK and ERK1/2 appeared to be integrin-mediated as the Src inhibitor pyrazolopyrimidine (PP1) blocked their activation. Surface topography also affected RAW 264.7 cell number. The in vivo section comprised two parts. First, an immunostaining technique was developed that allowed recognition of the lysosomal marker ED1 on macrophages embedded in L.R-White embedding medium. We then used this technique to identify recruited ED1-positive macrophages at the implant-tissue interface in cryosections and in sections of L.R-White-embedded polished and rough implants placed in rats. We conclude that RAW 264.7 cells are highly sensitive to micron-scale features of surface topography; the features affected cell morphology as well as the organization and localization of F-actin and vinculin. For the first time ever we report that topographies used in clinical implants differentially regulate activation of FAK, Src and ERK1/2 signaling molecules. As these pathways lead to production of inflammatory cytokines, surface topography may be important in deciding host responses to/and eventual outcomes of implantation. The results point to the possibility of designing implants with specific surface features to control host responses and thereby improve clinical outcomes.
Neighborhood Safety: Reducing Violent Crime among Youth in Granville and Vance Counties
Creators: name: Poole, Carrie
name: Morning, Tyzie
name: Siebert, Rachel
name: Barajas, Gabriela
name: Sirkis, Brianna
Publisher: name: The University of North Carolina at Chapel Hill University Libraries
Year: 2024

description:
Violent crime is a crucial element within the neighborhood and built environment, impacting a community’s overall progress towards improving social determinants of health. The Granville and Vance community health assessment (CHA) highlights violent crime in these counties as an impeding factor to community safety, especially among the youth population (ages 10-24). Quantitative and qualitative data from the 2018 and 2021 CHA conducted by the Granville Vance public health department provided sufficient context for identifying violent crime as a serious problem for these counties. Further research into county level and state level crime rates yielded results that indicate violent crime in Vance County is a greater problem than in Granville and the state overall.


Violent crime disrupts community cohesion and has a multitude of short term and long-term impacts for individuals and the community. Several concepts such as systems thinking, community engagement, leadership, policy review and quality improvement were utilized to identify leverage points aimed at reducing violent crimes. This proposal recommends the implementation of youth intervention programs, such as structured mentorships, after-school activities, safe riding programs, and job training, as primary interventions for reducing youth violent crime. Interventions should be supported through policy and community engagement.
Additional file 1: Figure S1. of pGluAβ increases accumulation of Aβ in vivo and exacerbates its toxicity
Creators: name: Oyinkan Sofola-Adesakin
name: Mobina Khericha
name: Snoeren, Inge
name: Tsuda, Leo
name: Partridge, Linda
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Cell Biology
subject: Molecular Biology
subject: Pharmacology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Computational Biology

description: Generation of AβpE3-42. The proenkephalin signaling peptide upstream of AβQ3-42 is cleaved by prohormone convertases, AβQ3-42 is then released, and glutaminyl cyclase catalyses its conversion to AβpE3-42. (PDF 271 kb)
Paroster Sharp 1882
Creators: name: Hendrich, Lars
name: Fery, Hans
Publisher: name: Zenodo
Year: 2008
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Dytiscidae
Paroster

description: Checklist of Paroster Sharp, 1882
The genus is endemic for Australia and distributed in its south-west and south-east (except one doubtful record of P. thapsinus from northern Australia; see Fery 2004). The following checklist gives all known species and their distribution, including the two new species.
Paroster baylyi Sp. n. SW of Western Australia
P. couragei Watts, 1978 SW of Western Australia
P. gibbi Watts, 1978 South Australia, Victoria P. insculptilis (Clark, 1862) South Australia, Victoria P. michaelseni Régimbart, 1908 SW of Western Australia
P. niger Watts, 1978 SW of Western Australia
P. nigroadumbratus (Clark, 1862) South Australia, Victoria P. pallescens Sharp, 1882 SW of Western Australia
P. sharpi Watts, 1978 SW of Western Australia
P. thapsinus (Guignot, 1955) South Australia, New South Wales
(N of Western Australia?) P. ursulae Sp. n. SW of Western Australia
description: Published as part of Hendrich, Lars & Fery, Hans, 2008, Paroster baylyi sp. n., P. ursulae sp. n. (Col. Dytiscidae, Hydroporinae) and the water beetle diversity of pan-gnammas on isolated granite outcrops in the Mallee of south-western Australia, pp. 27-41 in Zootaxa 1704 on page 30, DOI: 10.5281/zenodo.180850
Additional file 6: Figure S4. of MOG-induced experimental autoimmune encephalomyelitis in the rat species triggers anti-neurofascin antibody response that is genetically regulated
Creators: name: Flytzani, Sevasti
name: Guerreiro-Cacais, Andre
name: NâDiaye, Marie
name: Lindner, Maren
name: Linington, Christopher
name: Meinl, Edgar
name: Stridh, Pernilla
name: Jagodic, Maja
name: Olsson, Tomas
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biophysics
subject: Cell Biology
subject: Neuroscience
subject: Pharmacology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine

description: Maximum score (MAX) of 333 DA backcross rats with present or absent anti-rrNF IgG2b antibodies. Anti-rrNF IgG2b (â  /+); absence/presence of anti-rrNF IgG2b. MAX; maximum score. The statistical significance between the groups was calculated by using non-parametric Mann-Whitney test in GraphPad Prism 5.0. Error bars represent SEM. (PDF 593 kb)
The relationships between headwater stream macroinvertebrate communities and summer low-flow events in a temperate rain forest
Creators: name: Murakami, Aya
Publisher: name: University of British Columbia
Year: 2009

description: Using a forested headwater stream system as a model, the effects of inter-annual variation in summer discharge regimes on aquatic insect communities were investigated. More specifically, the benthic invertebrate community response to the intensity, minimum discharges, frequency, duration and abruptness of summer low-flow events were examined. We hypothesized that intensification of summer low-flow events, both in duration and magnitude, have some negative impacts on benthic macroinvertebrate communities in riffles. Examples of negative impacts include reduction in their abundance and/or biodiversity. First, the abundance and functional trait data of the benthic macroinvertebrates in the three streams in the Malcolm Knapp Research Forest, British Columbia, Canada, were analyzed with respect to the low-flow events. Second, population models were built to simulate the potential responses of lotic aquatic insect communities to future climate change scenarios that differ in the rate of intensifications in extreme flow events: a low-flow event scenario within the current range versus 10% increase in intensity. The summer low-flow events were found to have a significant relationship with benthic macroinvertebrate communities through three-table ordinations of the empirical data. The community structure was correlated with a major ocean-atmosphere regime shift (Pacific Decadal Oscillation). The intensity and duration of low-flow events explained the observed shift in community structure favouring r-selected traits (e.g. short life cycle, high reproduction rate). The two low-flow severity scenarios showed the significant differential impacts on the aquatic insect community structures when individual populations were modeled according to their traits. Aquatic insects could be separated into three groups according to their sensitivities, measured by extinction rates, toward the two scenarios.