cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Inflationary Cosmology with Quantum Gravitational Effects and the Swampland Conjectures
Creators: name: Wu, Qiang
name: Zhu, Tao
Publisher: name: arXiv
Year: 2019
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: Recently proposed two swampland criteria that arising from string theory landscape lead to the important challenge of the realization of single-field inflationary models. Especially one of swampland criteria which implies a large tensor-to-scalar ratio is strongly in tension with recent observational results. In this paper, we explore the possibility if the swampland conjectures could be compatible with single-field inflationary scenarios if the effects due to the quantum theory of gravity are considered. We show that the quantum gravitational effects due to the nonlinear dispersion relation provides significant modifications on the amplitude of both the scalar and tensor perturbation spectra. Such modifications could be either raise or reduce the perturbation spectra depending on the values of the parameters in the nonlinear terms of the dispersion relations. Therefore, these effects can reduce the tensor-to-scalar ratio to a smaller value which helps to relax the tension between the swampland conjecture and observational data.
description: 7 pages, 2 figures
Beyond authorship: Analyzing contributions in PLOS ONE and the challenges of appropriate attribution
Creators: name: Maddi, Abdelghani
name: da Silva, Jaime A. Teixeira
Publisher: name: arXiv
Year: 2025
Subjects: subject: Digital Libraries (cs.DL)
subject: Computers and Society (cs.CY)
subject: FOS: Computer and information sciences

description: This study aims to evaluate the accuracy of authorship attributions in scientific publications, focusing on the fairness and precision of individual contributions within academic works. The study analyzes 81,823 publications from the journal PLOS ONE, covering the period from January 2018 to June 2023. It examines the authorship attributions within these publications to try and determine the prevalence of inappropriate authorship. It also investigates the demographic and professional profiles of affected authors, exploring trends and potential factors contributing to inaccuracies in authorship. Surprisingly, 9.14% of articles feature at least one author with inappropriate authorship, affecting over 14,000 individuals (2.56% of the sample). Inappropriate authorship is more concentrated in Asia, Africa, and specific European countries like Italy. Established researchers with significant publication records and those affiliated with companies or nonprofits show higher instances of potential monetary authorship. Our findings are based on contributions as declared by the authors, which implies a degree of trust in their transparency. However, this reliance on self-reporting may introduce biases or inaccuracies into the dataset. Further research could employ additional verification methods to enhance the reliability of the findings. These findings have significant implications for journal publishers, highlighting the necessity for robust control mechanisms to ensure the integrity of authorship attributions. Moreover, researchers must exercise discernment in determining when to acknowledge a contributor and when to include them in the author list. Addressing these issues is crucial for maintaining the credibility and fairness of academic publications.
In Praise of Clausius Entropy: Reassessing the Foundations of Boltzmannian Statistical Mechanics
Creators: name: Weaver, Christopher Gregory
Publisher: name: arXiv
Year: 2020
Subjects: subject: History and Philosophy of Physics (physics.hist-ph)
subject: Classical Physics (physics.class-ph)
subject: FOS: Physical sciences

description: I will argue, pace a great many of my contemporaries, that there's something right about Boltzmann's attempt to ground the second law of thermodynamics in a suitably amended deterministic time-reversal invariant classical dynamics, and that in order to appreciate what's right about (what was at least at one time) Boltzmann's explanatory project, one has to fully apprehend the nature of microphysical causal structure, time-reversal invariance, and the relationship between Boltzmann entropy and the work of Rudolf Clausius.
description: 67 pages, 0 figures
Ulmus americana Linnaeus 1753
Creators: name: Jarvis, Charlie
Publisher: name: Zenodo
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Rosales
Ulmaceae
Ulmus
Ulmus americana

description: Ulmus americana Linnaeus, Species Plantarum 1: 226. 1753. "Habitat in Virginia." RCN: 1846. Lectotype (Seymour in Rhodora 54: 139. 1952): Herb. Linn. No. 321.3 (LINN). Current name:  Ulmus americana L. (Ulmaceae).
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part U), pp. 906-910 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 906, DOI: 10.5281/zenodo.291971
Coarse-Grained Model for Phospholipid/Cholesterol Bilayer
Creators: name: Murtola, Teemu
name: Falck, Emma
name: Patra, Michael
name: Karttunen, Mikko
name: Vattulainen, Ilpo
Publisher: name: arXiv
Year: 2004
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: We construct a coarse-grained (CG) model for dipalmitoylphosphatidylcholine (DPPC)/cholesterol bilayers and apply it to large-scale simulation studies of lipid membranes. Our CG model is a two-dimensional representation of the membrane, where the individual lipid and sterol molecules are described by point-like particles. The effective intermolecular interactions used in the model are systematically derived from detailed atomic-scale molecular dynamics simulations using the Inverse Monte Carlo technique, which guarantees that the radial distribution properties of the CG model are consistent with those given by the corresponding atomistic system. We find that the coarse-grained model for the DPPC/cholesterol bilayer is substantially more efficient than atomistic models, providing a speed-up of approximately eight orders of magnitude. The results are in favor of formation of cholesterol-rich and cholesterol-poor domains at intermediate cholesterol concentrations, in agreement with the experimental phase diagram of the system. We also explore the limits of the novel coarse-grained model, and discuss the general validity and applicability of the present approach.
Additional file 1: of BERMUDA: a novel deep transfer learning method for single-cell RNA sequencing batch correction reveals hidden high-resolution cellular subtypes
Creators: name: Wang, Tongxin
name: Johnson, Travis
name: Shao, Wei
name: Lu, Zixiao
name: Helm, Bryan
name: Zhang, Jie
name: Huang, Kun
Publisher: name: figshare
Year: 2019
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Developmental Biology
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Supplementary figures and tables (PDF 3839 kb)
Brisinga insularum Wood-Mason & Alcock 1891
Creators: name: Jangoux, Michel
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Echinodermata
Asteroidea
Brisingida
Brisingidae
Brisinga
Brisinga insularum

description: insularum Wood-Mason & Alcock, 1891, Brisinga
Brisinga insularum Wood-Mason & Alcock, 1891: 439. — Mah in Clark & Mah 2001: 314.
CURRENT STATUS. — Brisinga insularum Wood-Mason & Alcock, 1891.
TYPE MATERIAL. — Laccadive Sea • 1 syntype (2 arms); station 108; Investigator Survey; depth 1909 m; MNHN-IE-2014-386.
REMARK
The type locality of Brisinga insularum (Investigator Survey, Laccadives Sea, station 108, 1909 m) is the only known locality of the species.
description: Published as part of Jangoux, Michel, 2022, The type specimens of extant asteroids (Echinodermata) in the Muséum national d'Histoire naturelle of Paris, pp. 259-334 in Zoosystema 44 (11) on page 292, DOI: 10.5252/zoosystema2022v44a11, http://zenodo.org/record/6616817
Role of Coherent Eddies in Potential Vorticity Transport in Two-layer Quasigeostrophic Turbulence
Creators: name: Zhang, Wenda
name: Wolfe, Christopher L. P.
name: Abernathey, Ryan
Publisher: name: arXiv
Year: 2019
Subjects: subject: Atmospheric and Oceanic Physics (physics.ao-ph)
subject: FOS: Physical sciences

description: The transport by materially coherent eddies is studied in a two-layer quasigeostrophic model of geophysical turbulence. The coherent eddies are identified by closed contours of the Lagrangian-averaged vorticity deviation obtained from Lagrangian particles advected by the flow. A series of flow regimes with different bottom friction strengths are considered---it is found that coherent eddies become more prevalent and longer-lasting as the strength of the bottom drag increases. These coherent eddies, with average core radius close to the deformation radius, propagate zonally with speeds close to the long baroclinic Rossby wave speed and meridionally with a preference for cyclones to propagate poleward and anticyclones to propagate equatorward. The meridional propagation preference of the coherent eddies gives rise to a systematic upgradient potential vorticity (PV) transport, which is in the opposite direction as the background PV transport and not captured by standard Lagrangian diffusivity estimates. The upgradient PV transport by coherent eddy cores is less than 10% of the total PV transport, but the PV transport by the periphery flow induced by the PV inside coherent eddies is significant and downgradient. This clarifies the distinct roles of the trapping and stirring effect of coherent eddies in PV transport in geophysical turbulence.
Additional file 1 of Home-based telemonitoring versus hospital admission in high risk pregnancies: a qualitative study on womenâ€™s experiences
Creators: name: J. Van Den Heuvel
name: C. Teunis
name: A. Franx
name: N. Crombag
name: M. Bekker
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Cancer
subject: Computational Biology

description: Additional file 1. Overview of questions posted in the online Facebook groups as part of the qualitative study.
title: 02_1168
Creators: name: Wesley Baldwin, John
name: Baldwin, John W.
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2018
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: L'ensemble de ces notes ont été crée par John Baldwin lors d'une de ses premières périodes de résidence à Paris. Ces documents comprennent tous les magistri qu’il avait pu rencontrer dans ses sources. Aux XIIème et XIIIème siècles, les universités n'existant pas encore, le titre de magister s'il évoque certainement une compétence n'est pas rattaché de façon systématique au passage par les écoles. De surcroît, les magistris sont le plus souvent désignés par leur seul prénom. La lecture de ces données est donc difficile et suppose un long travail pour tenter d'identifier un individu auquel on pourrait rattacher plusieurs mentions. John Baldwin avait donc renoncé à utiliser ces données pour donner un prolongement à sa magnifique étude sur les gradués d'université et leur emploi par les Capétiens et les Plantagenêts. Néanmoins, il a conservé ces données et elles sont potentiellement très utile dans le cadre de Studium, comme le sont toutes les mentions dans les volumes des Fasti Ecclesiae Gallicanae de chanoines portant ce titre de magister sans autres précisions. L'ampleur des dépouillements rend ces données très utiles et nous devons une grande reconnaissance à John Baldwin pour avoir pris la peine de faire photocopier ses fiches et de nous les avoir transmises amicalement.
Les données ainsi que les images des fiches sont accessibles sur le site Internet à l'adresse suivante : http://studium-baldwin.lamop.fr/.
Les transcriptions des fiches ont été effectuées par des étudiants de Paris 1 Panthéon - Sorbonne mais elles n'ont pas été corrigées par la suite.
description: Relation: https://lamop.hypotheses.org/
Exploring physics of ferroelectric domain walls via Bayesian analysis of atomically resolved STEM data
Creators: name: Nelson, Christopher T.
name: Vasudevan, Rama K.
name: Zhang, Xiaohang
name: Ziatdinov, Maxim
name: Eliseev, Eugene A.
name: Takeuchi, Ichiro
name: Morozovska, Anna N.
name: Kalinin, Sergei V.
Publisher: name: arXiv
Year: 2020
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The physics of ferroelectric domain walls is explored using the Bayesian inference analysis of atomically resolved STEM data. We demonstrate that domain wall profile shapes are ultimately sensitive to the nature of the order parameter in the material, including the functional form of Ginzburg-Landau-Devonshire expansion, and numerical value of the corresponding parameters. The preexisting materials knowledge naturally folds in the Bayesian framework in the form of prior distributions, with the different order parameters forming competing (or hierarchical) models. Here, we explore the physics of the ferroelectric domain walls in BiFeO3 using this method, and derive the posterior estimates of relevant parameters. More generally, this inference approach both allows learning materials physics from experimental data with associated uncertainty quantification, and establishing guidelines for instrumental development answering questions on what resolution and information limits are necessary for reliable observation of specific physical mechanisms of interest.
description: Upload the accepted version
The UV/IR Interplay in Theories with Space-time Varying Non-commutativity
Creators: name: Robbins, Daniel
name: Sethi, Savdeep
Publisher: name: arXiv
Year: 2003
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We consider scalar field theory with space and space-time-dependent non-commutativity. In perturbation theory, we find that the structure of the UV/IR mixing is quite different from cases with constant non-commutativity. In particular, UV/IR mixing becomes intertwined in an interesting way with violations of momentum conservation.
description: 15 pages, LaTeX, References added
Coherence protection by the quantum Zeno effect and non-holonomic control in a Rydberg Rubidium isotope
Creators: name: Brion, E.
name: Akulin, V. M.
name: Comparat, D.
name: Dumer, I.
name: Harel, G.
name: Kebaili, N.
name: Kurizki, G.
name: Mazets, I.
name: Pillet, P.
Publisher: name: arXiv
Year: 2004
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The protection of the coherence of open quantum systems against the influence of their environment is a very topical issue. A scheme is proposed here which protects a general quantum system from the action of a set of arbitrary uncontrolled unitary evolutions. This method draws its inspiration from ideas of standard error-correction (ancilla adding, coding and decoding) and the Quantum Zeno Effect. A pedagogical demonstration of our method on a simple atomic system, namely a Rubidium isotope, is proposed.
description: 17 pages, 6 figures
External shock model for the large-scale, relativistic X-ray jets from the microquasar XTE J1550-564
Creators: name: Wang, X. Y.
name: Dai, Z. G.
name: Lu, T.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Large-scale, decelerating, relativistic X-ray jets due to material ejected from the black-hole candidate X-ray transient and microquasar XTE J1550-564 has been recently discovered with Chandra by Corbel et al. (2002). We find that the dynamical evolution of the eastern jet at the late time is consistent with the well-known Sedov evolutionary phase. A trans-relativistic external shock dynamic model by analogy with the evolution of gamma-ray burst remnants, is shown to be able to fit the observation data reasonably well. The inferred interstellar medium density around the source is well below the canonical value $n_ISM \sim 1 cm^{-3}$. We find that the emission from the continuously shocked interstellar medium (forward shock region) decays too slowly to be a viable mechanism for the eastern X-ray jet. However, the rapidly fading X-ray emission can be interpreted as synchrotron radiation from the non-thermal electrons in the adiabatically expanding ejecta. These electrons were accelerated by the reverse shock (moving back into the ejecta) which becomes important when the inertia of the swept external matter leads to an appreciable slowing down of the original ejecta. To ensure the dominance of the emission from the shocked ejecta over that from the forward shock region during the period of the observations, the magnetic field and electron energy fractions in the forward shock region must be far below equipartition. Future continuous, follow-up multi-wavelength observations of new ejection events from microquasars up to the significant deceleration phase should provide more valuable insight into the nature of the interaction between the jets and external medium.
description: Accepted for publication in ApJ, minor changes; 11 pages, including 5 figures
ShinyTPs: Curating transformation products from text mining results
Creators: name: Palm, Emma Helena
name: Schymanski, Emma L.
name: Chirsir, Parviel
name: Krier, Jessy
name: Thiessen, Paul
name: Zhang, Jian
name: Bolton, Evan
Publisher: name: Zenodo
Year: 2024

description: Poster for the ShinyTPs application presented at the ZeroPM prioritization workshop.

Please fin the repository for the R-package here: uniluxembourg / LCSB / Environmental Cheminformatics / ShinyTPs · GitLab
Psammodiscus nitidus Round & D. G. Mann 1980
Creators: name: Watanabe, Tsuyoshi
name: Nagumo, Tamotsu
name: Sun, Zhongmin
name: Hasegawa, Kazukiyo
name: Miyagawa, Tomofumi
name: Kumada, Misato
name: Tanaka, Jiro
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Pleuronectiformes
Pleuronectidae
Psammodiscus
Psammodiscus nitidus

description: Psammodiscus nitidus (Gregory) Round & D.G. Mann (1980: 371) (Figs 1–18)
 Basionym: Coscinodiscus nitidus Gregory (1857: 499, pl. 10, fig. 45)
 TYPE:— UK: Scotland, Lamlash Bay (BM 1343, Hendey 1964: 76, syntype).
 Size and shape: Cells solitary, attached to sand grains (Figs 1a, b). Valves circular to slightly elliptic in valve view (Figs 2–4). Valve diameter 13.5–28.5 µm, 8–9 striae in 10 µm, 8 areolae in 10 µm (Table 1).
 Plastids and nucleus: Discoid plastids located along valve surface, number ca. 90 (Fig. 5). Nucleus lies at cell centre (Fig.5).
 Fine structures of valve: Valve face flat (Fig. 6), striae radiate, reaching mantle (Fig. 6). Areola on valve face (Figs 7, 8) and mantle (Fig. 8) occluded by rotae with 2–3 spokes. Internal views of small valves not observed. Larger valves (Figs 9 and 12) originate from same frustule. Striae and areolae of large valves morphologically similar to those in smaller valves (Figs 9–11); occasionally areola abnormalities visible (Fig. 10). Spokes in areolae not observed from internal view (Fig. 14).
 Rimoportula: Number of rimoportulae 0–2 (Figs 6, 12, 15) per valve. Rimoportula external opening located near valve centre (Figs 6, 7). Some valves lack central rimoportula (Fig. 15). In larger valves, external opening of rimoportula observed near valve margin (Fig. 10). In internal view, two rimoportulae located at opposite sides near valve margin (Figs 12–14). Rimoportula sessile with simple slit surrounded by ridge (Figs 13, 14).
 Central small pore: Central small pore located near valve centre (Figs 6, 7).
 Additional small pore: In larger valve, external opening of small pore observed near valve margin (Fig. 10). Additional small pore situated close to rimoportula near margin (Fig. 14).
 Cingulum: epicingulum consisting of three open bands: valvocopula (VC), second (2B) and third (3B) bands (Figs 17a, b). Valvocopula and second girdle bands open at 180° to each other (Figs 15, 16, 18). VC with two rows of pores (Fig. 16), its opening covered by ligula of 2B (Figs 16, 17a, 17b). 2B with single row of pores (Fig. 17a, b). 3B narrow with single row of triangular non-occluded pores (Figs 17a, b).
description: Published as part of Watanabe, Tsuyoshi, Nagumo, Tamotsu, Sun, Zhongmin, Hasegawa, Kazukiyo, Miyagawa, Tomofumi, Kumada, Misato & Tanaka, Jiro, 2013, Morphology and taxonomy of Psammodiscus Round & Mann (Bacillariophyceae: Rhaphoneidales) with a description of the new species Psammodiscus calceatus, pp. 1-12 in Phytotaxa 124 (1) on page 2, DOI: 10.11646/phytotaxa.124.1.1, http://zenodo.org/record/5085034
The D_8-tower of weak Jacobi forms and applications
Creators: name: Adler, Dmitry
name: Gritsenko, Valery
Publisher: name: arXiv
Year: 2019
Subjects: subject: Algebraic Geometry (math.AG)
subject: FOS: Mathematics
subject: 11F30, 11F46, 11F50

description: We construct a tower of arithmetic generators of the bigraded polynomial ring J_{*,*}^{w, O}(D_n) of weak Jacobi modular forms invariant with respect to the full orthogonal group O(D_n) of the root lattice D_n for 2\le n\le 8. This tower corresponds to the tower of strongly reflective modular forms on the orthogonal groups of signature (2,n) which determine the Lorentzian Kac-Moody algebras related to the BCOV (Bershadsky-Cecotti-Ooguri-Vafa)-analytic torsions. We prove that the main three generators of index one of the graded ring satisfy a special system of modular differential equations. We found also a general modular differential equation of the generator of weight 0 and index 1 which generates the automorphic discriminant of the moduli space of Enriques surfaces.
Status of VIRGO
Creators: name: Freise, A.
Publisher: name: arXiv
Year: 2004
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: The French-Italian interferometric gravitational wave detector VIRGO is currently being commissioned. Its principal instrument is a Michelson interferometer with 3 km long optical cavities in the arms and a power-recycling mirror. This paper gives an overview of the present status of the system. We report on the presently attained sensitivity and the system's performance during the recent commissioning runs. After a sequence of intermediate stages, the interferometer is now being used in the so-called recombined configuration. The input laser beam is spatially filtered by a 144 m long input mode-cleaner before being injected to the main interferometer. The main optics are suspended from so-called \sa s, which provide an excellent seismic isolation. The two 3 km long Fabry-Perot arm cavities are kept in resonance with the laser light, and the Michelson interferometer is held on the dark fringe. An automatic mirror alignment system based on the Anderson technique has been implemented for the arm cavities. The light leaving the dark port contains the gravitational wave signal; this light is filtered by an output mode-cleaner before being detected by a photo detector. This setup is the last step on the way to the final configuration, which will include power recycling.
description: 12 pages
Dytaster intermedius Perrier 1891
Creators: name: Jangoux, Michel
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Echinodermata
Asteroidea
Paxillosida
Astropectinidae
Dytaster
Dytaster intermedius

description: intermedius Perrier, 1891, Dytaster
Dytaster intermedius Perrier, 1891a: 271 ‒ Perrier 1896: 48, pl. 3, fig. 2b; Clark 1989: 278.
CURRENT STATUS. — Dytaster intermedius Perrier, 1891.
TYPE MATERIAL. — Azores • 1 syntype; station 248; L’Hirondelle campaign; 2870 m; Prince Albert of Monaco leg.; MNHN-IE-2014-128.
REMARK
Various syntypes in the MONA (Belloc 1950).
description: Published as part of Jangoux, Michel, 2022, The type specimens of extant asteroids (Echinodermata) in the Muséum national d'Histoire naturelle of Paris, pp. 259-334 in Zoosystema 44 (11) on page 292, DOI: 10.5252/zoosystema2022v44a11, http://zenodo.org/record/6616817
Oxalis
Creators: name: Suda, Jan
name: Krejčíková, Jana
name: Sudová, Radka
name: Oberlander, Kenneth C.
name: Dreyer, Léanne L.
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Oxalidales
Oxalidaceae
Oxalis

description: Key to the multifoliolate species of Oxalis from the Bokkeveld Plateau, South Africa
 1. Well-developed above-ground stem (exserted at least 12 mm above ground).............................................. O. zeyheri
- Stemless or with very short above-ground stem (less than 12 mm above ground)...................................................... 2
2. Leaflets glabrous.......................................................................................................................................................... 3
- Leaflets pubescent to hirsute........................................................................................................................................ 5
 3. Plant semi-succulent, leaflets oblong to linear-oblong, petiole fleshy to winged, sepals callose.................... O. flava
- Plant wiry to delicate, leaflets linear, conduplicate or U-shaped in cross-section, petioles filiform, sepals ecallose......................................................................................................................................................................................... 4
 4. Petiole base and apex distinctly swollen, petals with two swollen basal papillate swellings, filaments toothed............................................................................................................................................................................... O. pulvinata
 - Petiole base and apex slightly swollen, petals non-papillate, filaments edentate.................................... O. filifoliolata
 5. Petioles sparsely pilose, grooved, leaflets with two apical calli, sepals ecallose...................................... O. saltusbelli
 - Petioles densely pilose, terete, leaflets with multiple abaxial calli, sepals distinctly callose, recurved...... O. carolina
description: Published as part of Suda, Jan, Krejčíková, Jana, Sudová, Radka, Oberlander, Kenneth C. & Dreyer, Léanne L., 2013, Two new species of Oxalis (Oxalidaceae) from the Greater Cape Floristic Region, pp. 13-24 in Phytotaxa 124 (1) on page 23, DOI: 10.11646/phytotaxa.124.1.2, http://zenodo.org/record/5085054
Additional file 1 of Genome-wide analysis of the SCAMPs gene family of soybean and functional identification of GmSCAMP5 in salt tolerance
Creators: name: Wang, Min
name: He, Chuanrong
name: Shi, Guangcheng
name: Yin, Qiukai
name: Zhang, Hanyue
name: Yang, Wanmin
name: Yue, Aiqin
name: Wang, Lixiang
name: Du, Weijun
Publisher: name: figshare
Year: 2023
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Plant Biology

description: Supplementary Material 1: Figure S1. Analysis of SCAMP conserved domains. NCBI-CDD ( https://www.ncbi.nlm.nih.gov/cdd/ ) databases to confirm the presence of the SCAMP conserved domain, and visualize SCAMP conserved domains using IBS ( http://ibs.biocuckoo.org/ ). Differently colored boxes indicate different types of domains, and red depicts the SCAMP conserved domain. Digital indicated the position of the SCAMP domain in the soybean SCAMP genes. Figure S2. Chromosomal distribution of GmSCAMPs gene. 10 GmSCAMPs were identified from soybean genome and named GmSCAMP1 to GmSCAMP10 according to their distribution positions on chromosomes. Figure S3. Gene structure of GmSCAMPs. The exon and intron structures of the 10 GmSCAMP genes were compared. Figure S4. Conserved domains of GmSCAMPs. Conservation of motifs in the 10 GmSCAMP proteins was identified using the MEME website. (A) 10 different conserved motifs were indicated by colored box, namely motif1-10. (B) motif logo in the 10 GmSCAMP proteins was identified, A: Alanine, C: Cysteine, D: Aspartic acid, E: Glutamic acid, F: Phenylalanine, G: Glycine, H: Histidine, I: Isoleucine, K: Lysine, L: Leucine, M: Methionine, N: Asparagine, P: Proline, Q: Glutamine, R: Arginine, S: Serine, T: Threonine, V: Valine, W: Tryptophan, Y: Tyrosine. Figure S5. Expression profiles of GmSCAMP genes in different soybean tissues. The expression abundance of each transcript is represented by the color: red, higher expression; blue, lower expression. Expression levels in the whole seeds at five stages of seed development (globular, heart, cotyledon, early-maturation, mid-maturation, late-maturation, dry), and vegetative (leaves, roots, stems, seedlings) and reproductive (floral buds) tissues. Figure S6. Fluorescence detection of positive hairy roots. Fluorescence detection of positive hairy roots in SCAMP5-RNAi, EV-Control, and SCAMP5-OE. Table S1. Physical and chemical properties of GmSCAMPs. Table S2. Primers used in this study
Primary palliative care : an asynchronous online course design
Creators: name: Prasloski, Carleigh Isabella
Publisher: name: The University of British Columbia
Year: 2025

description: Palliative care is an active, holistic approach aimed at improving the quality of life for patients experiencing serious health-related suffering, as well as their families and caregivers. While often misconceived as only end-of-life care delivered in specialized settings, palliative care exists at primary, secondary and tertiary levels. Primary palliative care integrates palliative principles into generalist healthcare practice, addressing patients’ basic palliative needs in primary care clinics, general hospital units, long-term care facilities and home settings. Despite its critical role in chronic disease management, many primary care providers lack sufficient training in the early recognition of palliative care needs, inadvertently delaying timely interventions. Patients who receive palliative care late in their illness are more likely to experience uncontrolled symptoms, have increased reliance on acute care services, undergo aggressive medical interventions and die in hospital. This project examined the need for primary palliative care education, the optimal structure and content of a primary care provider-specific continuing education course, and its potential for large-scale individual and societal impacts. A four-module, asynchronous online course outline was developed based on conceptual frameworks, evidence-based literature and clinical guidelines from British Columbia’s leading palliative care experts. A future implementation strategy was outlined, utilizing the University of British Columbia’s Continuing Professional Development platform. By equipping primary care providers with essential palliative competencies, this project aimed to foster a proactive approach to serious illness care, ultimately reducing healthcare system strain and improving patient outcomes.
Timing and spectral studies of LMC X-4 in high and low states with Beppo-SAX: Detection of pulsations in the soft spectral component
Creators: name: Naik, S.
name: Paul, B.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We report here detailed timing and spectral analysis of two Beppo-SAX observations of the binary X-ray pulsar LMC X-4 carried out during the low and high states of its 30.5 days long super-orbital period. Timing analysis clearly shows 13.5 s X-ray pulsations in the high state of the super-orbital period which allows us to measure the mid-eclipse time during this observation. Combining this with two other mid-eclipse times derived earlier with the ASCA, we derived a new estimate of the orbital period derivative. Pulse-phase averaged spectroscopy in the high and low states shows that the energy spectrum in the 0.1 - 10 keV band comprises of a hard power-law, a soft excess, and a strong iron emission line. The continuum flux is found to decrease by a factor of ~ 60 in the low state while the decrease in the iron line flux is only by a factor of ~ 12, suggesting a different site for the production of the line emission. In the low state, we have not found any significant increase in the absorption column density. The X-ray emission is found to come from a very large region, comparable to the size of the companion star. Pulse phase resolved spectroscopy in the high state shows a pulsating nature of the soft spectral component with some phase offset compared to the hard X-rays, as is known in some other binary X-ray pulsars.
description: 13 pages, 10 figures, Accepted for publication in The Astrophysical Journal
Improving Neural Protein-Protein Interaction Extraction with Knowledge Selection
Creators: name: Zhou, Huiwei
name: Li, Xuefei
name: Yao, Weihong
name: Liu, Zhuang
name: Ning, Shixian
name: Lang, Chengkun
name: Du, Lei
Publisher: name: arXiv
Year: 2019
Subjects: subject: Computation and Language (cs.CL)
subject: FOS: Computer and information sciences

description: Protein-protein interaction (PPI) extraction from published scientific literature provides additional support for precision medicine efforts. Meanwhile, knowledge bases (KBs) contain huge amounts of structured information of protein entities and their relations, which can be encoded in entity and relation embeddings to help PPI extraction. However, the prior knowledge of protein-protein pairs must be selectively used so that it is suitable for different contexts. This paper proposes a Knowledge Selection Model (KSM) to fuse the selected prior knowledge and context information for PPI extraction. Firstly, two Transformers encode the context sequence of a protein pair according to each protein embedding, respectively. Then, the two outputs are fed to a mutual attention to capture the important context features towards the protein pair. Next, the context features are used to distill the relation embedding by a knowledge selector. Finally, the selected relation embedding and the context features are concatenated for PPI extraction. Experiments on the BioCreative VI PPI dataset show that KSM achieves a new state-of-the-art performance (38.08% F1-score) by adding knowledge selection.
description: Published in Computational Biology and Chemistry; 14 pages, 2 figures
Probing neutrino masses with future galaxy redshift surveys
Creators: name: Lesgourgues, Julien
name: Pastor, Sergio
name: Perotto, Laurence
Publisher: name: arXiv
Year: 2004
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We perform a new study of future sensitivities of galaxy redshift surveys to the free-streaming effect caused by neutrino masses, adding the information on cosmological parameters from measurements of primary anisotropies of the cosmic microwave background (CMB). Our reference cosmological scenario has nine parameters and three different neutrino masses, with a hierarchy imposed by oscillation experiments. Within the present decade, the combination of the Sloan Digital Sky Survey (SDSS) and CMB data from the PLANCK experiment will have a 2-sigma detection threshold on the total neutrino mass close to 0.2 eV. This estimate is robust against the inclusion of extra free parameters in the reference cosmological model. On a longer term, the next generation of experiments may reach values of order sum m_nu = 0.1 eV at 2-sigma, or better if a galaxy redshift survey significantly larger than SDSS is completed. We also discuss how the small changes on the free-streaming scales in the normal and inverted hierarchy schemes are translated into the expected errors from future cosmological data.
description: 14 pages, 7 figures. Added results with the KAOS proposal and 1 reference
Litonotaster intermedius
Creators: name: Jangoux, Michel
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Echinodermata
Asteroidea
Valvatida
Goniasteridae
Litonotaster
Litonotaster intermedius

description: intermedius Perrier, 1884, Pentagonaster
Pentagonaster intermedius Perrier, 1884: 243, pl. 5, figs 5, 6.
Litonotaster intermedius ‒ Clark & Downey 1992: 250.
CURRENT STATUS. — Litonotaster intermedius (Perrier, 1884).
TYPE MATERIAL. — Caribbean Sea • 2 syntypes; BLAKE expedition (1877-1878); 24°33’N, 84°23’W; depth 3532 m; MNHN-IE-2014-131.
REMARK
The two MNHN syntypes should represent the type series of the species (no syntypes in the MCZ).
description: Published as part of Jangoux, Michel, 2022, The type specimens of extant asteroids (Echinodermata) in the Muséum national d'Histoire naturelle of Paris, pp. 259-334 in Zoosystema 44 (11) on page 292, DOI: 10.5252/zoosystema2022v44a11, http://zenodo.org/record/6616817
Ulmus scabra Mill.
Creators: name: Jarvis, Charlie
Publisher: name: Zenodo
Year: 2007
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Rosales
Ulmaceae
Ulmus
Ulmus scabra

description: Ulmus campestris Linnaeus, Species Plantarum 1: 225. 1753. "Habitat in Europa ad pagos." RCN: 1845. Lectotype (Armstrong & Sell in Bot. J. Linn. Soc. 120: 42. 1996): Herb. Linn. No. 321.1 (LINN). Generitype of Ulmus Linnaeus. Current name:  Ulmus scabra Mill. (Ulmaceae). Note: The name has long been treated as a nomen ambiguum, and Armstrong & Sell indicated that they were proposing the name for formal rejection. However, no proposal appears to have been published.
description: Published as part of Jarvis, Charlie, 2007, Chapter 7: Linnaean Plant Names and their Types (part U), pp. 906-910 in Order out of Chaos. Linnaean Plant Types and their Types, London :Linnaean Society of London in association with the Natural History Museum on page 906, DOI: 10.5281/zenodo.291971
SCORCH. III. Analytical Models of Reionization with Varying Clumping Factors
Creators: name: Chen, Nianyi
name: Doussot, Aristide
name: Trac, Hy
name: Cen, Renyue
Publisher: name: arXiv
Year: 2020
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: In the Simulations and Constructions of the Reionization of Cosmic Hydrogen (SCORCH) project, we compare analytical models of the hydrogen ionization fraction with radiation-hydrodynamic simulations. We derive analytical models of the mass-weighted hydrogen ionization fraction from the local ionization balance equations as a more accurate alternative to the widely adopted model based on the volume filling factor. In particular, our model has a recombination term quadratic in the ionization fraction, which is consistent with the two-body interaction nature of recombination. Then, we use the radiation-hydrodynamic simulations to study the clumping factors needed to solve the analytical equations, and provide accurate fitting functions. We find that the ionized hydrogen clumping factors from our radiative transfer simulations are significantly different than those from other simulations that use a uniform photoionization background. In addition to redshift dependence, we also see the dependence of ionized hydrogen clumping factor on ionization fraction, and we incorporate this into our fits. We calculate the reionization histories using our analytical models and clumping factors and compare with widely adopted models, and all of our models achieve $<7\%$ difference from simulation results while the other models have $>20\%$ deviations. The Thomson optical depths from reionization calculated from our analytical models result in $<5\%$ deviation from simulations, while the previous analytical models have $>20\%$ difference in and could result in biased conclusions of the IGM reionization.
description: 14 pages, 8 figures
Additional file 5 of Rugby Fans in Training New Zealand (RUFIT-NZ): protocol for a randomized controlled trial to assess the effectiveness and cost-effectiveness of a healthy lifestyle program for overweight men delivered through professional rugby clubs in New Zealand
Creators: name: Maddison, Ralph
name: Hargreaves, Elaine
name: Yannan Jiang
name: Calder, Amanda
name: Wyke, Sally
name: Gray, Cindy
name: Hunt, Kate
name: Lubans, David
name: Eyles, Helen
name: Draper, Nick
name: Ihirangi Heke
name: Kara, Stephen
name: Sundborn, Gerhard
name: Arandjus, Claire
name: Jenkins, Matthew
name: Marsh, Samantha
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 5. Award letter for study grant from the Health Research Council.
Warm dark matter model with a few keV mass is bad for the too-big-to-fail problem
Creators: name: Kang, Xi
Publisher: name: arXiv
Year: 2019
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: Theoretical studying of the very inner structure of faint satellite galaxy requires very high-resolution hydro-dynamical simulations with realistic models for star formation, which are beginning to emerge recently. In this work we present an analytical description to model the inner kinematic of satellites in the Milky Way (MW). We use a Monte-Carlo method to produce merger trees for MW mass halo and analytical models to produce stellar mass in the satellite galaxies. We consider two important processes which can significantly modify the inner mass distribution in satellite galaxy. The first is baryonic feedback which can induce a flat inner profile depending on the star formation efficiency in the galaxy. The second is the tidal stripping to reduce and re-distribute the mass inside satellite. We apply this model to MW satellite galaxies in both CDM and thermal relic WDM models. It is found that tidal heating must be effective to produce a relatively flat distribution of the satellite circular velocities, to agree with the data. The constraint on WDM mass depends on the host halo mass. For a MW halo with dark matter mass lower than $2\times 10^{12}M_{\odot}$, a 2 keV WDM model can be safely excluded as the predicted satellite circular velocities are systematically lower than the data. For WDM with mass of 3.5 keV, it requires the MW halo mass to be larger than $1.5\times 10^{12}M_{\odot}$, otherwise the 3.5 Kev model can also be excluded. Our current model can not exclude the WDM model with mass larger than 10 Kev.
description: 17 pages, 12 figures, MNRAS in press
Cuenotaster involutus
Creators: name: Jangoux, Michel
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Echinodermata
Asteroidea
Valvatida
Ganeriidae
Cuenotaster
Cuenotaster involutus

description: involutus Koehler 1912, Leucaster
Leucaster involutus Koehler, 1912: 155; 1912a: p. 55, pl. 5, figs 1-3, 6, 7, 10, 11.
Cuenotaster involutus ‒ Clark 1996: 187.
CURRENT STATUS. — Cuenotaster involutus (Koehler, 1912).
TYPE MATERIAL. — Antarctic • 1 syntype; Pourquoi-Pas? expedition; 1908-1910; unspecified locality; MNHN-IE-2014-67 • 1 syntype, same as for preceding; MNHN-IE-2014-143 • 3 syntypes; same as for preceding; MNHN-IE-2014-341 • 1 syntype; same as for preceding; MNHN-IE-2014-375 • 1 syntype; same as for preceding; MNHN-IE-2014-437 • 1 syntype; same as for preceding; MNHN- IE-2014-444 • 1 syntype; same as for preceding; MNHN-IE-2014-616.
REMARK Koehler (1912a) reports on ten individuals from four localities: King Georges Island (6 syntypes, 75 m); between Jenny and Adelaide Islands (2 syntypes, 254 m); near Alexandre 1st Land (1 syntype, 250 m); south of Jenny Island (1 syntype, 250 m).
description: Published as part of Jangoux, Michel, 2022, The type specimens of extant asteroids (Echinodermata) in the Muséum national d'Histoire naturelle of Paris, pp. 259-334 in Zoosystema 44 (11) on page 292, DOI: 10.5252/zoosystema2022v44a11, http://zenodo.org/record/6616817
Excited Boundary TBA in the Tricritical Ising Model
Creators: name: Feverati, G.
name: Pearce, P. A.
name: Ravanini, F.
Publisher: name: arXiv
Year: 2003
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: By considering the continuum scaling limit of the $A_{4}$ RSOS lattice model of Andrews-Baxter-Forrester with integrable boundaries, we derive excited state TBA equations describing the boundary flows of the tricritical Ising model. Fixing the bulk weights to their critical values, the integrable boundary weights admit a parameter $ξ$ which plays the role of the perturbing boundary field $ϕ_{1,3}$ and induces the renormalization group flow between boundary fixed points. The boundary TBA equations determining the RG flows are derived in the $\mathcal{B}_{(1,2)}\to \mathcal{B}_{(2,1)}$ example. The induced map between distinct Virasoro characters of the theory are specified in terms of distribution of zeros of the double row transfer matrix.
description: Latex, 14 pages - Talk given at the Landau meeting "CFT and Integrable Models", Sept. 2002 - v2: some statements about $\phi_{1,2}$ perturbations corrected
Multilingual MFA: Forced Alignment on Low-Resource Related Languages
Creators: name: Tosolini, Alessio
name: Bowern, Claire
Publisher: name: arXiv
Year: 2025
Subjects: subject: Computation and Language (cs.CL)
subject: FOS: Computer and information sciences

description: We compare the outcomes of multilingual and crosslingual training for related and unrelated Australian languages with similar phonological inventories. We use the Montreal Forced Aligner to train acoustic models from scratch and adapt a large English model, evaluating results against seen data, unseen data (seen language), and unseen data and language. Results indicate benefits of adapting the English baseline model for previously unseen languages.
title: 01_0133
Creators: name: Wesley Baldwin, John
name: Baldwin, John W.
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2018
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: L'ensemble de ces notes ont été crée par John Baldwin lors d'une de ses premières périodes de résidence à Paris. Ces documents comprennent tous les magistri qu’il avait pu rencontrer dans ses sources. Aux XIIème et XIIIème siècles, les universités n'existant pas encore, le titre de magister s'il évoque certainement une compétence n'est pas rattaché de façon systématique au passage par les écoles. De surcroît, les magistris sont le plus souvent désignés par leur seul prénom. La lecture de ces données est donc difficile et suppose un long travail pour tenter d'identifier un individu auquel on pourrait rattacher plusieurs mentions. John Baldwin avait donc renoncé à utiliser ces données pour donner un prolongement à sa magnifique étude sur les gradués d'université et leur emploi par les Capétiens et les Plantagenêts. Néanmoins, il a conservé ces données et elles sont potentiellement très utile dans le cadre de Studium, comme le sont toutes les mentions dans les volumes des Fasti Ecclesiae Gallicanae de chanoines portant ce titre de magister sans autres précisions. L'ampleur des dépouillements rend ces données très utiles et nous devons une grande reconnaissance à John Baldwin pour avoir pris la peine de faire photocopier ses fiches et de nous les avoir transmises amicalement.
Les données ainsi que les images des fiches sont accessibles sur le site Internet à l'adresse suivante : http://studium-baldwin.lamop.fr/.
Les transcriptions des fiches ont été effectuées par des étudiants de Paris 1 Panthéon - Sorbonne mais elles n'ont pas été corrigées par la suite.
description: Relation: https://lamop.hypotheses.org/