cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1: of A survey of facilitators and barriers to recruitment to the MAGNETIC trial
Creators: name: Geetinder Kaur
name: Smyth, Rosalind
name: Powell, Colin
name: Williamson, Paula
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Marine Biology
subject: Science Policy
subject: Hematology

description: Presents the recruitment survey questionnaire that was used to gather information on facilitators and barriers and strategies applied to boost recruitment. (DOCX 55 kb)
Additional file 1: Table S1. of Tocotrienols induce endoplasmic reticulum stress and apoptosis in cervical cancer cells
Creators: name: Comitato, Raffaella
name: Guantario, Barbara
name: Leoni, Guido
name: Kalanithi Nesaretnam
name: Ronci, Maria
name: Canali, Raffaella
name: Virgili, Fabio
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Computational Biology

description: List of genes modulated by T3 according to microarray analysis. Expression levels are represented as log2 fold changes. The last column on the right indicates if the gene has been reported to be involved in EndoR stress. (DOCX 49 kb)
Zodarion morosum Denis 1935
Creators: name: Marjan Komnenov
name: Eva Pitta
name: Konstantina Zografou
name: Maria Chatzaki
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Zodariidae
Zodarion
Zodarion morosum

description: Zodarion morosum Denis, 1935
Material examined. Site 5 (b: 2 ♂, 1 ♀), Site 6 (a: 13 ♂, 6 ♀; b: 19 ♂, 2 ♀; c: 12 ♂, 13 ♀), Site 8 (a: 5 ♂, 1 ♀; b: 2 ♀; c: 2 ♂), Site 10 (b: 1 ♂, 3 ♀; c: 1 ♀), Site 12 (b: 2 ♂; c: 4 ♀), Site 13 (a: 1 ♂, 1 ♀; c: 3 ♂, 2 ♀), Site 15 (b: 4 ♂, 2 ♀; c: 11 ♂, 4 ♀).
Distribution. Southern part of European Russia, S-Ukraine, Bulgaria, F. Y. Republic of Macedonia, Greece, N- Turkey (Komnenov, 2014). Chorotype. Ponto-E-Mediterranean.
description: Published as part of Marjan Komnenov, Eva Pitta, Konstantina Zografou & Maria Chatzaki, 2016, Discovering the still unexplored arachnofauna of the National Park of Dadia-Lefkimi-Soufli, NE Greece: a taxonomic review with description of new species, pp. 1-66 in Zootaxa 4096 (1) on pages 43-44, DOI: 10.11646/zootaxa.4096.1.1, http://zenodo.org/record/263078
METHODS OF TEACHING THE LIFE AND CREATION OF ISAJON SULTON IN OUT-OF-CLASS COURSES
Creators: name: Makhsutbaeva, Nigora
Publisher: name: Zenodo
Year: 2024

description: This article discusses the effectiveness of organizing extracurricular activities for students studying in the school education system.  It is necessary to study the life and creative activity of Isajon Sultan in depth and to use additional training in the promotion of his works.  The use of Isajon Sultan's works is of great importance in the study of national values, folk traditions and unique expressions of students.  There are recommendations on the use of FSMU, retelling, additional questions and answers in the organization of training sessions.
Additional file 1 of Subtype-specific CpG island shore methylation and mutation patterns in 30 breast cancer cell lines
Creators: name: Heejoon Chae
name: Sangseon Lee
name: Nephew, Kenneth
name: Kim, Sun
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Supplementary file contains Supplementary Figure S1â  4 and Table S1â  2. (PDF 2170 kb)
Revealing the Recent Height Changes of the Great Altesch Glacier Using TanDEM-X DEM Series
Creators: name: Vlieghe, Pierre-Louis
Publisher: name: ETH Zurich
Year: 2023
Subjects: Glacier
info:eu-repo/classification/ddc/550
Earth sciences

description: Monitoring glacier mass balance is essential for understanding glacier-climate interactions and predicting water resources management. As the largest glacier in the Alps, the Great Aletsch Glacier has a length of 22 km and covers about of 78 km2. It contains 20% of the entire Swiss ice mass, and thus plays significent role in understanding the dynamics of glacier mass change in this region. Because of its significance, the TanDEM-X satellite mission has selected the Great Aletsch Glacier as a super-testsite and has collected abundant single-pass bistatic Synthtetic Aperture Radar (SAR) data over the glacier since 2011. Leveraging these TanDEM-X satellite data, we generated 124 digital elevation models (DEMs) from the Coregistered Single-look Slant Range Complex (CoSSC) data product, calculated glacier elevation changes between 2011 and 2022, and quantified the temporal dynamics of the mass balance of the Great Aletsch Glacier. The DEMs were generated using an iterative approach. 
We initially used an external DEM (swissALTI3D) as the reference for geocoding and interferogram simulation. The simulated interferogram was subtracted from the interferogram between the CoSSC data pairs to generated a differential interferogram. The unwrapped phase in the differential interferogram corresponds to the height difference between the TanDEM-X measurements and the reference DEM, and thus we converted the phase into differential height to update the reference DEM. At this point, the updated reference DEM was accepted as the final product if the mean and standard deviation of the differential height met with the convergence criteria, otherwise it was used as the new reference in the subsequent iteration. Following the DEM generation, we used xDEM python package to analyze the DEM series. We first measured the elevation change by differencing two DEMs, then used a local hypsometric interpolation method to fill the dDEM voids within the glacier outline, and finally integrated the elevation difference over the glacier to calculate the ice volume and mass change. Our results revealed a consistent glacier-wide height loss of 1 ma−1 on average between 2011 and 2022, corresponding to a cumulative volumetric ice loss of 79×106 m3 a−1 and mass loss of 68 Mt a−1 (assuming a mean ice density of 850 kgm3). 
Notably, the Konkordiaplatz region, situated at elevations between 2600 and 2800 meters, exhibited an average elevation loss of 2.3 ma−1, whereas the Glacier tongue region, ranging in elevation between 1900 and 2100 meters, witnessed an average elevation loss of 5.2 ma−1. In summary, our results have provided valuable insights into the dynamic changes of the Great Aletsch Glacier by analyzing the abundant TanDEM-X data. The detailed spatiotemporal of our work advanced our understanding of glacier recession in the Alps under the climate change.
Additional file 1: Figure S1. of Increase in circulating Th17 cells during anti-TNF therapy is associated with ultrasonographic improvement of synovitis in rheumatoid arthritis
Creators: name: Hull, Dobrina
name: Cooksley, Helen
name: Chokshi, Shilpa
name: Williams, Richard
name: Abraham, Sonya
name: Taylor, Peter
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Depletion of CD4+ cells attenuates IL-17 responses in the Elispot assay. Cells were stained with CD4-PE pre and post magnetic labelling to assess effectiveness of CD4+ depletion by flow cytometry (A and B). Whole PBMCs prior to depletion contain CD4+ T cells (A) whilst after depletion of CD4+ T cells with magnetic beads, there are virtually no CD4+ T cells present in this representative patient (B). The frequency of IL17-producing peripheral blood mononuclear cells is markedly attenuated when CD4+ cells are depleted from the PBMC population (C). The effects of depletion are shown in three representative patients. PBMC (nâ  =â  200,000) prior to and after the depletion from each patient were set up in the IL17 Elispot assay and stimulated with 1Â mg/ml anti-CD3 antibody (OKT3 clone). Results are expressed as number of IL17 specific spot forming cells per million PBMC. Representative experimental wells of the IL17 Elispot assay from one patient are shown demonstrating that after depletion of CD4+ cells the number of IL17-positive spots per well is attenuated (D). Each spot represents one cytokine-producing cell. The numbers under each well indicate the total number of IL17-positive spots in that well. spSFC/10 6 specific spot-forming cells per million PBMC. (DOCX 127 kb)
Additional file 1: Text S1. of MORO: a Cytoscape app for relationship analysis between modularity and robustness in large-scale biological networks
Creators: name: Cong-Doan Truong
name: Tien-Dzung Tran
name: Yung-Keun Kwon
Publisher: name: Figshare
Year: 2016
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Plant Biology
subject: Computational Biology

description: Parallel robustness computation based on the OpenCL. Text S2. Output file by the batch-mode simulation on RBNs. Text S3. Centrality measures. (PDF 753 kb)
Additional file 1: Figure S1. of Genome-wide functional analysis using the barcode sequence alignment and statistical analysis (Barcas) tool
Creators: name: Jihyeob Mun
name: Dong-Uk Kim
name: Kwang-Lae Hoe
name: Kim, Seon-Young
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Pipelines of pooled library screen analysis. Table S1. Public library sets of shRNA, sgRNA and deletion mutant strains. Figure S2. A list of wrong barcodes from 1,230 shRNAs of TRC library. Table S2. Sequences of 25 barcodes with abnormally increased mapping counts by imperfect matching. Table S3. A list of the used options for each tool. Table S4. Comparison of mapping results and speed by three tools. (PDF 7691 kb)
Zodarion thoni Nosek 1905
Creators: name: Marjan Komnenov
name: Eva Pitta
name: Konstantina Zografou
name: Maria Chatzaki
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Zodariidae
Zodarion
Zodarion thoni

description: Zodarion thoni Nosek, 1905
description: Published as part of Marjan Komnenov, Eva Pitta, Konstantina Zografou & Maria Chatzaki, 2016, Discovering the still unexplored arachnofauna of the National Park of Dadia-Lefkimi-Soufli, NE Greece: a taxonomic review with description of new species, pp. 1-66 in Zootaxa 4096 (1) on page 44, DOI: 10.11646/zootaxa.4096.1.1, http://zenodo.org/record/263078
Gahrliepia (Gateria) zayuensis Wu and Wen 1984
Creators: name: Nielsen, David H.
name: Robbins, Richard G.
name: Rueda, Leopoldo M.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Trombidiformes
Trombiculidae
Gahrliepia
Gahrliepia zayuensis

description: Gahrliepia (Gateria) zayuensis Wu and Wen, 1984 a:
PAL
Gateria (Gateria) zayuensis, Wen & Gui 2000
description: Published as part of Nielsen, David H., Robbins, Richard G. & Rueda, Leopoldo M., 2021, Annotated world checklist of the Trombiculidae and Leeuwenhoekiidae (1758 - 2021) (Acari: Trombiculoidea), with notes on nomenclature, taxonomy, and distribution, pp. 1-243 in Zootaxa 4967 (1) on page 27, DOI: 10.11646/zootaxa.4967.1.1, http://zenodo.org/record/4745510
Additional file 2: Figure S2. of Increase in circulating Th17 cells during anti-TNF therapy is associated with ultrasonographic improvement of synovitis in rheumatoid arthritis
Creators: name: Hull, Dobrina
name: Cooksley, Helen
name: Chokshi, Shilpa
name: Williams, Richard
name: Abraham, Sonya
name: Taylor, Peter
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Higher frequency of Th17 cells at baseline associated with poorer response to anti-TNF treatment. Positive correlations are shown between percentages of circulating CD4 + IL17+ cells (determined by intracellular cytokine staining using flow cytometry) at baseline and the change in quantitative score for synovial vascularity (10 MCP Trans PDA score) from baseline to week 1 on treatment (A) in patients with RA with presence of power Doppler signal at baseline (n = 19). Also positive correlations are shown between the percentages of circulating CD4 + IL17+ cells at baseline and the change in quantitative score for synovial thickening (10 MCP Trans STA score) from baseline to week 1 (B), from baseline to week 4 (C) and from baseline to week 12 (D) on treatment in the whole RA cohort. Correlations was tested using Spearman’s rank method. 10 MCP Trans PDA composite transverse power Doppler area score for synovial vascularity of ten metacarpophalangeal joints, 10 MCP Trans STA composite transverse synovial thickness area score of ten metacarpophalangeal joints. (DOCX 51 kb)
Enhancing toxicity prediction of MLinvitroTox: Prioritizing unidentified compounds in environmental samples based on hazard assessment
Creators: name: Bosshard, Robin
Publisher: name: ETH Zurich
Year: 2023

description: This thesis enhances the capabilities of the MLinvitroTox framework, which is designed to forecast the toxicity of unidentified chemical compounds utilizing High-Resolution Mass Spectrometry (HRMS/MS) data. The framework aims to maximize the detection rate of most hazardous compounds within environmental samples, all while minimizing the occurrence of false alarms, thus channeling resources and efforts into the labor-intensive task of identifying and quantifying compounds that possess the highest potential for causing harm. This approach stands in contrast to standard nontarget screening HRMS workflows, which typically prioritize compounds that are detected most frequently and with highest intensities in the mass-to-charge ratio of ions in a sample. We employed hazard-driven machine learning models based on molecular fingerprints derived from chemical structure and utilized in vitro toxicity data from ToxCast/Tox21. We have developed pytcpl, a Python processing pipeline that is applicable to the latest toxicity data. We have leveraged datasets spanning various assay endpoints that encompass a wide range of toxicity aspects. The XGBoost classifier achieves a median F1-score of 0.65 across all 345 target assay endpoints when predicting binary toxicity based on molecular fingerprints from known chemical structures. The models also demonstrate their predictive effectiveness when validated on SIRIUS predicted molecular fingerprints from MassBank spectra. Furthermore, a web app was created to facilitate interaction with the data and the MLinvitroTox framework.
Zodarion turcicum Wunderlich 1980
Creators: name: Marjan Komnenov
name: Eva Pitta
name: Konstantina Zografou
name: Maria Chatzaki
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Zodariidae
Zodarion
Zodarion turcicum

description: Zodarion turcicum Wunderlich, 1980
(Figs 112–113)
Material examined. Site 12 (a: 2 ♀), Site 14 (a: 1 ♂; b: 1 ♂), Site 15 (a: 2 ♂). Distribution. E-Bulgaria (Dimitrov, 1996); NE-Greece (present data); Turkey (Wunderlich, 1980). Chorotype. Ponto-E-Mediterranean.
description: Published as part of Marjan Komnenov, Eva Pitta, Konstantina Zografou & Maria Chatzaki, 2016, Discovering the still unexplored arachnofauna of the National Park of Dadia-Lefkimi-Soufli, NE Greece: a taxonomic review with description of new species, pp. 1-66 in Zootaxa 4096 (1) on page 44, DOI: 10.11646/zootaxa.4096.1.1, http://zenodo.org/record/263078
Callilepis cretica Roewer 1928
Creators: name: Marjan Komnenov
name: Eva Pitta
name: Konstantina Zografou
name: Maria Chatzaki
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Gnaphosidae
Callilepis
Callilepis cretica

description: Callilepis cretica (Roewer, 1928)
Material examined. Site 5 (a: 1 ♂; b: 1 ♀; c: 4 ♀), Site 6 (b: 1 ♂), Site 7 (b: 2 ♂, 1 ♀), Site 8 (c: 1 ♂), Site 10 (c: 1 ♀), Site 12 (a: 2 ♂; b: 8 ♂, 3 ♀; c: 1 ♂, 1 ♀), Site 13 (b: 1 ♂), Site 14 (a: 1 ♂; b: 3 ♂, 1 ♀; c: 2 ♀).
Distribution. Bulgaria, F. Y. Republic of Macedonia, Greece, Azerbaijan, S-Turkey (Komnenov, 2014). Chorotype. E-Mediterranean.
description: Published as part of Marjan Komnenov, Eva Pitta, Konstantina Zografou & Maria Chatzaki, 2016, Discovering the still unexplored arachnofauna of the National Park of Dadia-Lefkimi-Soufli, NE Greece: a taxonomic review with description of new species, pp. 1-66 in Zootaxa 4096 (1) on page 44, DOI: 10.11646/zootaxa.4096.1.1, http://zenodo.org/record/263078
Natural Bayesian Statistics
Creators: name: Bolik, Jannis
Publisher: name: ETH Zurich
Year: 2023

description: In this thesis, we develop Natural Bayesian Statistics, a new statistical theory that is intended as a replacement for standard Bayesian statistics in most situations. It is fully defined for families of probability distributions where the transformations between different random variables of that family have a group structure, like location-scale models. Additionally, it also applies to submanifolds of these models, like deep neural network regression models. It resolves the parametrization-dependence of maximum entropy priors, maximum a posteriori and highest probability density confidence sets by redefining these operations geometrically. The redefined maximum entropy prior without any prior knowledge provides guarantees on the test error of the model, assuming the model family is correctly specified. To achieve this, a new type of differential geometry is established for the parameter space that differs from the standard Riemannian geometry typically assumed in Information Geometry.
Callilepis schuszteri Herman 1879
Creators: name: Marjan Komnenov
name: Eva Pitta
name: Konstantina Zografou
name: Maria Chatzaki
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Gnaphosidae
Callilepis
Callilepis schuszteri

description: Callilepis schuszteri (Herman, 1879)
Material examined. Site 9 (a: 1 ♂, 1 ♀; b: 1 ♀; c: 1 ♀), Site 13 (b: 1 ♀).
Distribution. Europe, Russia, Korea, Japan, China (Komnenov, 2014). Chorotype. Eurasian.
description: Published as part of Marjan Komnenov, Eva Pitta, Konstantina Zografou & Maria Chatzaki, 2016, Discovering the still unexplored arachnofauna of the National Park of Dadia-Lefkimi-Soufli, NE Greece: a taxonomic review with description of new species, pp. 1-66 in Zootaxa 4096 (1) on page 44, DOI: 10.11646/zootaxa.4096.1.1, http://zenodo.org/record/263078
Additional file 2: Figure S1. of MORO: a Cytoscape app for relationship analysis between modularity and robustness in large-scale biological networks
Creators: name: Cong-Doan Truong
name: Tien-Dzung Tran
name: Yung-Keun Kwon
Publisher: name: Figshare
Year: 2016
Subjects: subject: Space Science
subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Cell Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Computational Biology

description: Analysis results of the HSN network by MORO. Figure S2. Correlations between the modularity and robustness of 6,400 random Boolean networks where the number of nodes is 50 and the number of interactions is in the range of [49, 2031]. Figure S3. Changes of module centrality values against the module size in the HSN network. Figure S4. Changes of module centrality values against the module size in STKE-shuffled random networks. Figure S5. Changes of module centrality values against the module size in HSN-shuffled random networks. Figure S6. Correlation between module centrality values and in-/out-module robustness in the STKE network. Figure S7. Correlation between module centrality values and in/out-module robustness in the HSN network. (PDF 1052 kb)
Metering the Meter, or How to Efficiently and Deterministically Charge the Execution of Smart Contracts
Creators: name: Mitenkov, George
Publisher: name: ETH Zurich
Year: 2023

description: Blockchain systems are rapidly evolving and, fueled by novel use cases and the competition with traditional financial systems, have to be not only secure and decentralized but also performant: processing thousands of transactions per second and having sub-second latency. Under such demanding conditions, the cost models, which are used by blockchains to mitigate attacks on the network and to align the economic incentives between users and node operators, become even more important. On one hand, a cost model has to be a deterministic over-approximation of the real costs of smart contract execution to ensure that even malicious users pay their fair share of the costs. On the other hand, cost models have to be efficiently implementable, so that excessive cost metering during execution does not become itself a burden.

Unfortunately, existing solutions do not always satisfy these properties and are not designed with scalability and performance in mind. In particular, this work shows that naive implementations of cost models and their metering schemes hinder possible performance benefits from techniques such as JIT compilation, while still leaving the blockchain systems open for attacks.

To overcome these limitations, we propose a new approach to the design of cost models and their implementation. While traditionally cost models are predominantly based on resource consumption in the network, the goal of our approach is to additionally align the incentives and requirements for users, developers, and node operators. In particular, we focus on one of such requirements – fast and efficient metering of instruction costs in smart contracts. Inspired by the problems of optimal profiling and code coverage, we define the problem of minimum metering instrumentation. The goal is to identify a minimal set of instrumentation points in a program so that it is possible to calculate the sum of costs of all executed instructions and ensure that the running sum of costs is within a fixed limit While the problem is hard in general, we present an algorithm that solve the problem under certain conditions.

Our evaluation shows that the proposed algorithm only needs to instrument 30.4-37.5% of the basic blocks of popular smart contracts, on average, and can also yield more than 2x run time improvements on selected benchmarks compared to the state-of-the-art approaches.
Reliability analysis of wind turbines using manifold-NARX surrogate models
Creators: name: Schär, Styfen
name: Marelli, Stefano
name: Sudret, Bruno
Publisher: name: ETH Zurich
Year: 2023
Subjects: Wind turbines
Surrogate modelling
NARX modeling

description: Modeling the dynamic response of systems is essential for structural health monitoring, reliability analysis or design optimization. Structures such as wind turbines, tall buildings or long bridges are submitted to transient excitation such as ground motions or wave and wind loads, which inherently showcase aleatory uncertainties, however.
To address uncertainty quantification questions such as sensitivity or reliability analyses, many runs of the simulator of the system would be needed, which is rather intractable in practice, thus the development of surrogate models in the last decade. The construction of surrogates for models with high-dimensional input and output time-series, is however, a complex topic that is not fully covered in the recent literature.
To tackle this class of problems, we propose a novel approach called manifold NARX (mNARX), which leverages prior knowledge of the system's physics to incrementally build an input manifold for efficiently surrogating dynamic system responses. In the case of wind turbines, the input wind box, which is a 10-minute three-dimensional wind field sampled at 20 Hz is first compressed using a 2-D discrete cosine transform, which yields time-series of spectral coefficients that we call features. 
These features are used to initially predict simple auxiliary quantities such as control system actions using a standard NARX approach. In an incremental process, the spectral features and the previously build auxiliary quantities are used to model increasingly complex variables such as rotor speed and position. In a final step, we use the spectral coefficients and auxiliary quantities to form an exogenous input manifold on which NARX models of the final quantities of interest (e.g., power generation, blade and tower bending moments, etc.) are constructed.
The training and evaluation of this surrogate model chain are computationally inexpensive (i.e., a handful of full system simulations is sufficient), up to several orders of magnitude cheaper than the original simulator. It can then be used for reliability analysis using standard simulation methods, as demonstrated in the investigated example.
Additional file 1: Table S1. of Cholesterol levels and long-term rates of community-acquired sepsis
Creators: name: Guirgis, Faheem
name: Donnelly, John
name: Dodani, Sunita
name: Howard, George
name: Safford, Monika
name: Levitan, Emily
name: Wang, Henry
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Is presenting results analyzed using a nonimputed data set. *Adjusted for demographics, health behaviors, chronic medical conditions, biomarker values, and functional status measures. Demographics = age, gender, race, region, income, and education; health behaviors = smoking status and alcohol use; chronic medical conditions = cancer, chronic lung disease, coronary artery disease, diabetes, hypertension, obesity, stroke, and Morisky medication adherence index; biomarkers = hs-CRP, Cystatin C, ACR, and eGFR; functional status measures = weakness, exhaustion, and low physical activity. HR hazard ratio, CI confidence interval, LDL-C low-density lipoprotein cholesterol, HDL-C high-density lipoprotein cholesterol, hs-CRP high-sensitivity C-reactive protein, ACR albumin–creatinine ratio, eGFR estimated glomerular filtration rate. (DOCX 12 kb)
Umbodinia Limeira-De-Oliveira & Marques & Gaimari & Rafael 2020, gen. nov.
Creators: name: Limeira-De-Oliveira, Francisco
name: Marques, Dayse Willkenia A.
name: Gaimari, Stephen D.
name: Rafael, José A.
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Odiniidae
Umbodinia

description: Umbodinia, gen. nov.
urn:lsid:zoobank.org:act: 115F 2131-84 A0-4D34-B272-C800DAC74739
Type species. Umbodinia bella, sp. nov., by present designation.
Gender. Feminine.
Etymology. The generic name derives from Latin umbo = rounded protuberance + the generic name Odinia, and refers to the shiny dark brown to black lobules located between the lunule and the margins of the eyes. The specific name derives from Latin bellus = beautiful.
description: Published as part of Limeira-De-Oliveira, Francisco, Marques, Dayse Willkenia A., Gaimari, Stephen D. & Rafael, José A., 2020, A new genus and species of odiniids (Diptera: Odiniidae) from the canopy of the Brazilian Amazon rainforest, pp. 164-170 in Zootaxa 4801 (1) on page 166, DOI: 10.11646/zootaxa.4801.1.8, http://zenodo.org/record/3990932
Civizelotes caucasius L. Koch 1866
Creators: name: Marjan Komnenov
name: Eva Pitta
name: Konstantina Zografou
name: Maria Chatzaki
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Gnaphosidae
Civizelotes
Civizelotes caucasius

description: Civizelotes caucasius (L. Koch, 1866)
Material examined. Site 1 (h: 2 ♀), Site 5 (a: 3 ♂; b: 7 ♂, 5 ♀; c: 2 ♀), Site 6 (a: 1 ♂, b: 23 ♂, 13 ♀; c: 2 ♂, 12 ♀), Site 8 (a: 8 ♂, 10 ♀; b: 4 ♂, 36 ♀; c: 7 ♀), Site 10 (b: 2 ♂, 13 ♀; c: 4 ♀), Site 12 (a: 2 ♂, b: 4 ♂, 18 ♀; c: 6 ♀), Site 13 (b: 2 ♂, 4 ♀; c: 9 ♀), Site 14 (a: 2 ♂; b: 4 ♂, 6 ♀; c: 1 ♀), Site 15 (a: 1 ♂, 1 ♀; b: 1 ♂, 1 ♀; c: 3 ♂, 8 ♀).
Distribution. S-Europe, Georgia, Azerbaijan, N-Iran, Turkmenistan, Kazakhstan, Uzbekistan, Kyrgyzstan, Turkey, Israel (Komnenov, 2014). Chorotype. S-European-Middle Asiatic.
description: Published as part of Marjan Komnenov, Eva Pitta, Konstantina Zografou & Maria Chatzaki, 2016, Discovering the still unexplored arachnofauna of the National Park of Dadia-Lefkimi-Soufli, NE Greece: a taxonomic review with description of new species, pp. 1-66 in Zootaxa 4096 (1) on pages 44-45, DOI: 10.11646/zootaxa.4096.1.1, http://zenodo.org/record/263078
Understanding attitudes to accent and dialect in UK teacher training
Creators: name: Baratta, Alex
Publisher: name: University of Manchester
Year: 2024
Subjects: classificationCode: 390104
subject: English and literacy curriculum and pedagogy (excl. LOTE, ESL and TESOL)
classificationCode: 390305
subject: Professional education and training

description: Worksop session from the ITET 2024 Annual PGCE Conference Inclusion & Inspiration - Education for Social Justice. 12 January 2024. University of Manchester. This session will first explain accent and dialect in detail, their inclusion, and standards for both, within the Teachers' Standards and then focus in depth on the results of my work with UK teachers, notably trainees. The results show a tendency for Northern and Midlands-accented speakers to be told to reduce their accents, with mentors having a preference for accents judged overall as more 'general' varieties, as opposed to broad. This discussion will also take the time to explain regional accents in terms of a trichotomy of broad - general - neutral varieties and what this means from a purely phonological perspective.
MOESM1 of Isoprene production by Escherichia coli through the exogenous mevalonate pathway with reduced formation of fermentation byproducts
Creators: name: Kim, Jung-Hun
name: Chonglong Wang
name: Hui-Jung Jang
name: Myeong-Seok Cha
name: Ju-Eon Park
name: Seon-Yeong Jo
name: Eui-Sung Choi
name: Seon-Won Kim
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Additional file 1: Table S1. Primers and strains used for the construction of E. coli AceCo strain. Figure S1. Chromatogram of isoprene standard dissolved in dodecane. Figure S2. Standard curve of isoprene. Figure S3. Effect of IPTG induction on isoprene production and cell growth of MGpsPtM strain (MG1655 harboring pTS-sPtispS-MVA). Figure S4. Effect of low IPTG concentrations on isoprene production rate and culture broth pH in the culture of MGpsPtM strain (MG1655 harboring pTS-sPtispS-MVA). Figure S5. Acetate formation and glycerol consumption of the 0.01Â mM IPTG induced culture of MGpsPtM in Fig.Â 4.
Civizelotes gracilis Canestrini 1868
Creators: name: Marjan Komnenov
name: Eva Pitta
name: Konstantina Zografou
name: Maria Chatzaki
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Gnaphosidae
Civizelotes
Civizelotes gracilis

description: Civizelotes gracilis (Canestrini, 1868)
Material examined. Site 5 (a: 7 ♂, 2 ♀), Site 6 (a: 5 ♂, 1 ♀; b: 2 ♀), Site 13 (b: 2 ♀), Site 15 (a: 7 ♂).
Distribution. Italy, Austria, Czech Republic, Slovakia, Hungary, Romania, Ukraine, Moldova, southern part of European Russia, Slovenia, Croatia, F. Y. Republic of Macedonia, Bulgaria, Greece, E-Turkey (Helsdingen, 2015; Komnenov, 2014). Chorotype. Ponto-E-Mediterranean.
description: Published as part of Marjan Komnenov, Eva Pitta, Konstantina Zografou & Maria Chatzaki, 2016, Discovering the still unexplored arachnofauna of the National Park of Dadia-Lefkimi-Soufli, NE Greece: a taxonomic review with description of new species, pp. 1-66 in Zootaxa 4096 (1) on page 45, DOI: 10.11646/zootaxa.4096.1.1, http://zenodo.org/record/263078
Cryptodrassus hungaricus Balogh 1935
Creators: name: Marjan Komnenov
name: Eva Pitta
name: Konstantina Zografou
name: Maria Chatzaki
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Gnaphosidae
Cryptodrassus
Cryptodrassus hungaricus

description: Cryptodrassus hungaricus (Balogh, 1935)
Material examined. Site 5 (a: 1 ♀), Site 6 (a: 2 ♂, 2 ♀), Site 8 (a: 2 ♂), Site 12 (b: 1 ♀).
Distribution. France, Switzerland, Italy, Hungary, Czech Republic, Slovakia, Romania, S-Ukraine—Crimea, southern part of European Russia, F. Y. Republic of Macedonia, Greece (Komnenov, 2014). Chorotype. S- European.
description: Published as part of Marjan Komnenov, Eva Pitta, Konstantina Zografou & Maria Chatzaki, 2016, Discovering the still unexplored arachnofauna of the National Park of Dadia-Lefkimi-Soufli, NE Greece: a taxonomic review with description of new species, pp. 1-66 in Zootaxa 4096 (1) on page 45, DOI: 10.11646/zootaxa.4096.1.1, http://zenodo.org/record/263078
Umbodinia Limeira-De-Oliveira & Marques & Gaimari & Rafael 2020
Creators: name: Limeira-De-Oliveira, Francisco
name: Marques, Dayse Willkenia A.
name: Gaimari, Stephen D.
name: Rafael, José A.
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Odiniidae
Umbodinia

description: Here
we include a modified couplet 8 and beyond in the key of Limeira-de-Oliveira et al. (2020) to separate the genera of Traginopinae with setulae on the scutellar disc, from those without setulae on the scutellar disc. Inclusion of Umbodinia gen. nov. forces several changes to the key after this couplet.
8. Scutellar disc setulose. Several anterior fronto-orbital setae inclinate............................... Shewellia Hennig
- Scutellar disc bare. Only 1 fronto-orbital seta inclinate. ....................................................... 9
9. Dorsocentral setae 5 (1+4).............................. Pauximyia Limeira-de-Oliveira, Marques, Gaimari & Rafael
- Dorsocentral setae 4 (1+3)............................................................................. 10
10. Four and/or five pairs of fronto-orbital setae. Surstylus articulated with epandrium.................. Pradomyia Gaimari
- Three pairs of fronto-orbital setae. Surstylus not articulated with epandrium..................................... 11
11. Face brown to black pruinose with white medial pruinose stripe........................................................................................................ Inpauema Limeira-de-Oliveira, Marques, Reis & Rafael
- Face uniformly yellow, lacking medial stripe.............................................................. 12
12. Frons in anterior view lacking black spots; Anepisternum lacking setae........................... Helgreelia Gaimari Frons in anterior view with 2 black spots (Fig. 4); Anepisternum with setae (Fig. 3)...................................................................................................... Umbodinia bella, gen. nov. et sp. nov.
description: Published as part of Limeira-De-Oliveira, Francisco, Marques, Dayse Willkenia A., Gaimari, Stephen D. & Rafael, José A., 2020, A new genus and species of odiniids (Diptera: Odiniidae) from the canopy of the Brazilian Amazon rainforest, pp. 164-170 in Zootaxa 4801 (1) on page 165, DOI: 10.11646/zootaxa.4801.1.8, http://zenodo.org/record/3990932
Complex-Frequency Control of Dynamic Virtual Power Plants
Creators: name: Domingo-Enrich, Roger
Publisher: name: ETH Zurich
Year: 2023
Subjects: Dynamic virtual power plant
Complex frequency
Grid-Forming Converter
info:eu-repo/classification/ddc/621.3
Electric engineering

description: In this work, we propose a novel control methodology for dynamic virtual power plants (DVPPs). We consider a group of grid-forming distributed energy resources (DERs) that cooperate to provide essential dynamic ancillary services, such as fast frequency and voltage control. To accomplish this task, we define the desired frequency and voltage control specifications of the aggregated DVPP. We disaggregate these specifications to obtain the desired local behavior for each device using novel complex-frequency control methods. A complex-frequency quantity represents the rate of change of both voltage amplitude and phase angle. The notion of complex frequency accommodates the multivariable characteristics exhibited in general power systems, where active and reactive power are coupled with both voltage amplitude and phase. Regarding the local controllers of the DVPP devices, we implement a complex droop control to achieve complex-frequency synchronization in the DVPP. Furthermore, this complex-frequency control of DVPPs can handle general networks with non-uniform R/X ratios and achieve ”perfect” aggregation in both frequency and voltage control. Throughout the work, we study the differences between the proposed complex-frequency DVPP and the existing conventional DVPP. Finally, our control strategy is validated by numerical case studies.
Drassodes lapidosus Walckenaer 1802
Creators: name: Marjan Komnenov
name: Eva Pitta
name: Konstantina Zografou
name: Maria Chatzaki
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Gnaphosidae
Drassodes
Drassodes lapidosus

description: Drassodes lapidosus (Walckenaer, 1802)
Material examined. Site 1 (e: 1 ♂), Site 2 (e: 1 ♂; g: 3 ♂, 2 ♀), Site 3 (g: 1 ♂), Site 5 (a: 1 ♂), Site 6 (a: 3 ♂), Site 8 (a: 2 ♂), Site 10 (b: 1 ♀), Site 11 (a: 1 ♂), Site 12 (a: 1 ♂), Site 13 (a: 1 ♂).
Distribution. Europe, Russia, Korea, Mongolia, China, Kazakhstan, Kyrgyzstan, Uzbekistan, Afghanistan, SW-Turkmenistan, Iran, Azerbaijan, Georgia, Turkey, Syria, Lebanon, Israel, Morocco, Tunisia, Algeria (Komnenov, 2014). Chorotype. Palearctic.
description: Published as part of Marjan Komnenov, Eva Pitta, Konstantina Zografou & Maria Chatzaki, 2016, Discovering the still unexplored arachnofauna of the National Park of Dadia-Lefkimi-Soufli, NE Greece: a taxonomic review with description of new species, pp. 1-66 in Zootaxa 4096 (1) on page 45, DOI: 10.11646/zootaxa.4096.1.1, http://zenodo.org/record/263078
Additional file 1: of Evolution of mitochondrial genomes in Baikalian amphipods
Creators: name: Romanova, Elena
name: Aleoshin, Vladimir
name: Kamaltynov, Ravil
name: Mikhailov, Kirill
name: Logacheva, Maria
name: Sirotinina, Elena
name: Gornov, Alexander
name: Anikin, Anton
name: Sherbakov, Dmitry
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: AT content plots for the (+) strand of mitochondrial genomes of Baikalian amphipods under study. The beginning of every graph corresponds to the start of the cox1 gene. Dashed lines indicate the places of disruptions in incompletely sequenced mitochondrial genomes. The putative CRs are marked by the colored boxes. (PDF 16,893 kb)
Additional file 10: of Molecular determinants of the adrenal gland functioning related to stress-sensitive hypertension in ISIAH rats
Creators: name: Fedoseeva, Larisa
name: Klimov, Leonid
name: Ershov, Nikita
name: Alexandrovich, Yury
name: Efimov, Vadim
name: Arcady Markel
name: Redina, Olga
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biophysics
subject: Molecular Biology
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Science Policy

description: Primers used in qPCR. (DOC 41 kb)
Drassodes lutescens C. L. Koch 1839
Creators: name: Marjan Komnenov
name: Eva Pitta
name: Konstantina Zografou
name: Maria Chatzaki
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Gnaphosidae
Drassodes
Drassodes lutescens

description: Drassodes lutescens (C. L. Koch, 1839)
Material examined. Site 8 (a: 8 ♂; b: 1 ♀), Site 12 (a: 3 ♂, 1 ♀; b: 1 ♀), Site 13 (a: 2 ♂), Site 14 (b: 1 ♀).
Distribution. Portugal, Spain, France, Italy, Ukraine, central, eastern and southern part of European Russia, Croatia, Bulgaria, F. Y. Republic of Macedonia, Montenegro, Albania, Greece, Kazakhstan, Uzbekistan, Pakistan, Afghanistan, Turkey, Syria, Israel, Oman, Morocco, Tunisia, Algeria, Libya, Ethiopia (Komnenov, 2014). Chorotype. Mediterranean-Middle Asiatic.
description: Published as part of Marjan Komnenov, Eva Pitta, Konstantina Zografou & Maria Chatzaki, 2016, Discovering the still unexplored arachnofauna of the National Park of Dadia-Lefkimi-Soufli, NE Greece: a taxonomic review with description of new species, pp. 1-66 in Zootaxa 4096 (1) on page 45, DOI: 10.11646/zootaxa.4096.1.1, http://zenodo.org/record/263078
Additional file 6: of Evolution of mitochondrial genomes in Baikalian amphipods
Creators: name: Romanova, Elena
name: Aleoshin, Vladimir
name: Kamaltynov, Ravil
name: Mikhailov, Kirill
name: Logacheva, Maria
name: Sirotinina, Elena
name: Gornov, Alexander
name: Anikin, Anton
name: Sherbakov, Dmitry
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: The predicted mitochondrial tRNAs secondary structures of Baikalian amphipods under study. (PDF 9263 kb)
Additional file 2: Table S2. of Pathways of aging: comparative analysis of gene signatures in replicative senescence and stress induced premature senescence
Creators: name: Kural, Kamil
name: Tandon, Neetu
name: Skoblov, Mikhail
name: Kel-Margoulis, Olga
name: Ancha Baranova
Publisher: name: Figshare
Year: 2016
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer
subject: Computational Biology

description: Transcription Factor Binding Sites within upstream regions of genes down-regulated in both types of senescence with log Fold Changeâ  >â  2.0. (DOCX 19 kb)
Additional file 6: Table S6. of Pathways of aging: comparative analysis of gene signatures in replicative senescence and stress induced premature senescence
Creators: name: Kural, Kamil
name: Tandon, Neetu
name: Skoblov, Mikhail
name: Kel-Margoulis, Olga
name: Ancha Baranova
Publisher: name: Figshare
Year: 2016
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Transcription Factor Binding Sites of Down-regulated genes with log Fold Changeâ
Additional file 5: Table S5. of Pathways of aging: comparative analysis of gene signatures in replicative senescence and stress induced premature senescence
Creators: name: Kural, Kamil
name: Tandon, Neetu
name: Skoblov, Mikhail
name: Kel-Margoulis, Olga
name: Ancha Baranova
Publisher: name: Figshare
Year: 2016
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer
subject: Computational Biology

description: Transcription Factor Binding Sites within upstream regions of genes up-regulated in bleomycin induced senescence with log Fold Changeâ  >â  1.5. (DOCX 24 kb)
Drassodes pubescens Thorell 1856
Creators: name: Marjan Komnenov
name: Eva Pitta
name: Konstantina Zografou
name: Maria Chatzaki
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Gnaphosidae
Drassodes
Drassodes pubescens

description: Drassodes pubescens (Thorell, 1856)
description: Published as part of Marjan Komnenov, Eva Pitta, Konstantina Zografou & Maria Chatzaki, 2016, Discovering the still unexplored arachnofauna of the National Park of Dadia-Lefkimi-Soufli, NE Greece: a taxonomic review with description of new species, pp. 1-66 in Zootaxa 4096 (1) on page 45, DOI: 10.11646/zootaxa.4096.1.1, http://zenodo.org/record/263078
Discovering the still unexplored arachnofauna of the National Park of Dadia-Lefkimi-Soufli, NE Greece: a taxonomic review with description of new species
Creators: name: Marjan Komnenov
name: Eva Pitta
name: Konstantina Zografou
name: Maria Chatzaki
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy

description: Material examined. Site 6 (a: 1 ♂), Site 15 (a: 1 ♂).
Distribution. Europe, Russia, Japan, Mongolia, China, E-Kazakhstan, Kyrgyzstan, Azerbaijan, Georgia, Turkey (Komnenov, 2014). Chorotype. Eurasian.
description: Published as part of Marjan Komnenov, Eva Pitta, Konstantina Zografou & Maria Chatzaki, 2016, Discovering the still unexplored arachnofauna of the National Park of Dadia-Lefkimi-Soufli, NE Greece: a taxonomic review with description of new species, pp. 1-66 in Zootaxa 4096 (1) on page 45, DOI: 10.11646/zootaxa.4096.1.1, http://zenodo.org/record/263078