cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 8: of UBL4A inhibits autophagy-mediated proliferation and metastasis of pancreatic ductal adenocarcinoma via targeting LAMP1
Creators: name: Chen, Hongze
name: Li, Le
name: Hu, Jisheng
name: Zhao, Zhongjie
name: Ji, Liang
name: Cheng, Chundong
name: Zhang, Guangquan
name: zhang, Tao
name: Li, Yilong
name: Chen, Hua
name: Pan, Shangha
name: Sun, Bei
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Physical Sciences not elsewhere classified
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified

description: Figure S5. The efficiency of LAMP1 downregulation and upregulation is detected by western blot and qRT-PCR. a-b The efficiency of LAMP1 downregulation and upregulation was detected by western blotting. c-d The efficiency of LAMP1 downregulation and upregulation was detected by qRT-PCR. e The expression of LAMP2 in CFPAC-1 and BxPC-3 of different groups (Vector, LV-UBL4A-Flag, shCtrl, LV-shUBL4A) were analyzed by western blotting. The statistical significance between different groups was calculated with Student t-test. Data are shown as the mean ± SD of three replicates; *P < 0.05, **P < 0.01; ***P < 0.001; ns: not significant. (PDF 210 kb)
Capacitance Performance of Sub-2-nm Graphene Nanochannels in Aqueous Electrolyte
Creators: name: Qiu, Yinghua
name: Chen, Yunfei
Publisher: name: arXiv
Year: 2017
Subjects: subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: Molecular dynamics simulations were used to explain the origin and properties of electrical double-layer capacitance in short graphene nanochannels with width below 2 nm. The results explain the previously reported experimental result on the non-monotonic dependence of the capacitance with the channel width. The mechanism for the anomalous increase of the capacitance in sub-1-nm in pore diameter is attributed here to the width-dependent radial location of counterions in the nanochannels, and the restricted number of co-ions. Decrease of the channel width lowers the number of co-ions and positions the counterions closer to the channel walls. For nanochannels with width ranging from 1 to 2 nm, co-ions are allowed to enter the nanochannel, and both types of ions assume alternating layered distributions leading to the decrease of the capacitance. Voltage is another control parameter which allows understanding capacitance in graphene nanochannels. As the voltage increases, due to limited space near the charged surface, more counterions need to be located in the center of the nanochannel resulting in further capacitance decrease.
description: 23 papges,7 figures
The affine approach to homogeneous geodesics in homogeneous Finsler spaces
Creators: name: Dušek, Zdeněk
Publisher: name: arXiv
Year: 2017
Subjects: subject: Differential Geometry (math.DG)
subject: FOS: Mathematics
subject: 53C22, 53C60, 53C30

description: In a recent paper, it was claimed that any homogeneous Finsler space of odd dimension admits a homogeneous geodesic through any point. For the proof, the algebraic method dealing with the reductive decomposition of the Lie algebra of the isometry group was used. However, the proof contains a serious gap. In the present paper, homogeneous geodesics in Finsler homogeneous spaces are studied using the affine method, which was developed in earlier papers by the author. The mentioned statement is proved correctly and it is further proved that any homogeneous Berwald space or homogeneous reversible Finsler space admits a homogeneous geodesic through any point.
Global literature review and enlightenment of intellectual property operation service platform under entrepreneurial situation
Creators: name: Wang, Yang
Publisher: name: Cardiff Metropolitan University
Year: 2021
Subjects: classificationCode: 350302
subject: Business information management (incl. records, knowledge and intelligence)

description: In recent years, more and more attention has been paid to intellectual property rights i
n China, and more and more research has been done on it. For the various platforms th
at generate intellectual property rights, Chinese and foreign academic circles have diffe
rent emphasis. This paper aims to review the global literature in the past five years and
examine the differences between Eastern and Western thinking in this field from an org
anizational perspective in the context of innovation and entrepreneurship in order to g
enerate corresponding inspiration.
Additional file 1: of Interprofessional collaboration in nursing homes (interprof): development and piloting of measures to improve interprofessional collaboration and communication: a qualitative multicentre study
Creators: name: MĂźller, Christiane
name: Fleischmann, Nina
name: Cavazzini, Christoph
name: Heim, Susanne
name: Seide, Svenja
name: Geister, Christina
name: Tetzlaff, Britta
name: Hoell, Andreas
name: Werle, Jochen
name: Weyerer, Siegfried
name: Scherer, Martin
name: Hummers, Eva
Publisher: name: figshare
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy

description: Interview guidelines study part 1. (PDF 192 kb)
Revisiting the problem of a crack impinging on an interface: a modeling framework for the interaction between the phase field approach for brittle fracture and the interface cohesive zone model
Creators: name: Paggi, Marco
name: Reinoso, Jose
Publisher: name: arXiv
Year: 2017
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The problem of a crack impinging on an interface has been thoroughly investigated in the last three decades due to its important role in the mechanics and physics of solids. In this investigation, this problem is revisited in view of the recent progresses on the phase field approach to brittle fracture. In this concern, a novel formulation combining the phase field approach for modeling brittle fracture in the bulk and a cohesive zone model for pre-existing adhesive interfaces is herein proposed to investigate the competition between crack penetration and deflection at an interface. The model, implemented within the finite element method framework using a monolithic fully implicit solution strategy, is applied to provide a further insight into the understanding of the role of model parameters on the above competition. In particular, in this study, the role of the fracture toughness ratio between the interface and the adjoining bulks and the characteristic fracture-length scales of the dissipative models are analyzed. In the case of a brittle interface, the asymptotic predictions based on linear elastic fracture mechanics criteria for crack penetration, single deflection or double deflection are fully captured by the present method. Moreover, by increasing the size of the process zone along the interface, or by varying the internal length scale of the phase field model, new complex phenomena are emerging, such as simultaneous crack penetration and deflection and the transition from single crack penetration to deflection and penetration with subsequent branching into the bulk.
The Repeating Fast Radio Burst FRB 121102 as Seen on Milliarcsecond Angular Scales
Creators: name: Marcote, B.
name: Paragi, Z.
name: Hessels, J. W. T.
name: Keimpema, A.
name: van Langevelde, H. J.
name: Huang, Y.
name: Bassa, C. G.
name: Bogdanov, S.
name: Bower, G. C.
name: Burke-Spolaor, S.
name: Butler, B. J.
name: Campbell, R. M.
name: Chatterjee, S.
name: Cordes, J. M.
name: Demorest, P.
name: Garrett, M. A.
name: Ghosh, T.
name: Kaspi, V. M.
name: Law, C. J.
name: Lazio, T. J. W.
name: McLaughlin, M. A.
name: Ransom, S. M.
name: Salter, C. J.
name: Scholz, P.
name: Seymour, A.
name: Siemion, A.
name: Spitler, L. G.
name: Tendulkar, S. P.
name: Wharton, R. S.
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Physical sciences

description: The millisecond-duration radio flashes known as Fast Radio Bursts (FRBs) represent an enigmatic astrophysical phenomenon. Recently, the sub-arcsecond localization (~ 100mas precision) of FRB121102 using the VLA has led to its unambiguous association with persistent radio and optical counterparts, and to the identification of its host galaxy. However, an even more precise localization is needed in order to probe the direct physical relationship between the millisecond bursts themselves and the associated persistent emission. Here we report very-long-baseline radio interferometric observations using the European VLBI Network and the 305-m Arecibo telescope, which simultaneously detect both the bursts and the persistent radio emission at milliarcsecond angular scales and show that they are co-located to within a projected linear separation of < 40pc (< 12mas angular separation, at 95% confidence). We detect consistent angular broadening of the bursts and persistent radio source (~ 2-4mas at 1.7GHz), which are both similar to the expected Milky Way scattering contribution. The persistent radio source has a projected size constrained to be < 0.7pc (< 0.2mas angular extent at 5.0GHz) and a lower limit for the brightness temperature of T_b > 5 x 10^7K. Together, these observations provide strong evidence for a direct physical link between FRB121102 and the compact persistent radio source. We argue that a burst source associated with a low-luminosity active galactic nucleus or a young neutron star energizing a supernova remnant are the two scenarios for FRB121102 that best match the observed data.
description: 13 pages, 5 figures, accepted to ApJL
Additional file 9: of UBL4A inhibits autophagy-mediated proliferation and metastasis of pancreatic ductal adenocarcinoma via targeting LAMP1
Creators: name: Chen, Hongze
name: Li, Le
name: Hu, Jisheng
name: Zhao, Zhongjie
name: Ji, Liang
name: Cheng, Chundong
name: Zhang, Guangquan
name: zhang, Tao
name: Li, Yilong
name: Chen, Hua
name: Pan, Shangha
name: Sun, Bei
Publisher: name: figshare
Year: 2019
Subjects: Biochemistry
Molecular Biology
Pharmacology
Chemical Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified
Developmental Biology

description: Supplementary Methods. (DOCX 25 kb)
MOESM6 of Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes
Creators: name: Strouhal, Michal
name: Oppelt, Jan
name: Mikalová, Lenka
name: Arora, Natasha
name: Nieselt, Kay
name: González-Candelas, Fernando
name: Šmajs, David
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Additional file 6. Analysis of indels (deletions/insertions) between SS14-like and Nichols-like TPA strains. The Nichols genome (CP004010.2) [6] was used as a reference for the comparison of TPA strains.
Open Science an der Stiftung Universität Hildesheim.
Creators: name: Strauch-Davey, Annette
Publisher: name: Zenodo
Year: 2022
Subjects: Open Science
Forschungsdaten
UB Hildesheim
FDM der UB Hildesheim
Veranstaltungen
events
awareness
Kulturwandel zum Digital Shift
Digital Shift
Bibliotheken

description: Open Science ist eine Chance.

 Dabei treiben Innovationen die moderne Wissensgesellschaft an, wobei Forschungsintegrität und
 die freie Verfügbarkeit von Forschungsergebnissen essentiell sind. Everyone on the road to Open Science! https://www.b-i-t-online.de/heft/2021-02-forschungsdaten.pdf
Ionic Behavior in Highly Concentrated Aqueous Solutions Nanoconfined between Discretely Charged Silicon Surfaces
Creators: name: Qiu, Yinghua
name: Ma, Jian
name: Chen, Yunfei
Publisher: name: arXiv
Year: 2017
Subjects: subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: Through molecular dynamics simulations considering thermal vibration of surface atoms, ionic behaviors in concentrated NaCl solutions confined between discretely charged silicon surfaces have been investigated. The electric double layer structure was found sensitive to the density and distribution of surface charges. Due to the surface charge discreteness, slight charge inversion appeared which depended on the surface charge density, bulk concentration and confinement. In the nanoconfined NaCl solutions differently concentrated from 0.2 M to 4.0 M, the locations of accumulation layers for Na+ and Cl- ions kept stable, but their peak values increased. The higher the concentration was, the more obvious charge inversion appeared. In 4.0 M NaCl solution, Na+ and Cl- ions show obvious alternating layered distributions which may be corresponding to the solidification found in experiments. By changing surface separation, the confinement had a large effect on ionic distributions. As both surfaces approached each other, many ions and water molecules were squeezed out of the confined space. Two adjacent layers in ion or water distribution profiles can be forced to closer to each other and merge together. From ionic hydration analysis, the coordination number of Na+ ions in highly-confined space was much lower than that in the bulk.
description: 26 pages, 9 figures
Abrikosov vortices in SF bilayers
Creators: name: Golubov, A. A.
name: Kupriyanov, M. Yu.
name: Khapaev, M. M.
Publisher: name: arXiv
Year: 2016
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: We study the spatial distribution of supercurrent circulated around an Abrikosov vortex in an SF bilayer in perpendicular magnetic field. Within the dirty limit regime and circular cell approximation for the vortex lattice, we derive the conditions when the Usadel equations the F layer can be solved analytically. Using the obtained solutions, we demonstrate the possibility of reversal of direction of proximity induced supercurrents around the vortex in the F layer compared to that in the S-layer. The direction of currents can be controlled either by varying transparency of the SF interface or by changing an exchange field in a ferromagnet. We argue that the origin of this effect is due the phase shift between singlet and triplet order parameter components induced in the F-layer. Possible ways of experimental detection of the predicted effect are discussed.
description: 5 pages, 1 figure
MPEC 2024-G153 : 2024 GF3
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2024
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469
subject: 2024 GF3

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
Governance and performance of the CAP: the role of agroforestry
Creators: name: LAWSON, Gerry
name: Muraru, Constantin
name: Kay, Sonja
Publisher: name: Zenodo
Year: 2024

description: Policy Briefing #69 (v1) was produced as an input to a discussion paper from DGAGRI on “Governance and Performance of the CAP”, circulated to the CAP Civil Dialogue Group technical meeting on 12.4.24. Version 2 updates most sections. Discussion on the Forest Monitoring Regulation stresses the need to use national legal definitions of forest rather than seeking to impose a single definition, and the advantage of having parcel-by-parcel information on land use and landscape features. A new section welcomes the Strategic Dialogue on the Future of Agriculture (link) and its emphasis on improving data quality and availability. In addition to the Farm Sustainability Data Network,  the Dialogue should have stressed the importance of making progress on  the Farm Sustainability Tool for Nutrients and the GreenData4All Initiative.  An EU Rural Data Governance Framework is needed to get buy-in from the sector on types of data which can be freely shared, and those which must be restricted.
description: EURAF Pollicy Briefing #69
title: ADCO, Huitième cartulaire de Saint-Étienne de Dijon (1661-1667), Cart. 31 (G 135), 549 folios, f. 1007
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: cartulaire
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge

description: Huitième cartulaire de Saint-Étienne de Dijon (1661-1667), Archives départementales de la Côte-d'Or, Cart. 31 (G 135), 549 folios, f. 1007, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Huitième cartulaire de Saint-Étienne de Dijon (1661-1667), Archives départementales de la Côte-d'Or, Cart. 31 (G 135), 549 folios, f. 1007, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https://manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
Agroforestry and agri-environmental metrics in the EU
Creators: name: LAWSON, Gerry
name: Muraru, Constantin
Publisher: name: Zenodo
Year: 2024

description: Policy Briefing #69 (v1) is a response to a discussion paper from DGAGRI on “Governance and Performance of the CAP”, circulated to a Civil Dialogue Group technical meeting on 12.4.24.  We conclude that; a) Agricultural data needs to be collected in a common geospatial framework linked to forestry, climate, soils, environment, energy and economics and automated as much as possible .. with the help of  initiatives like the Farm Sustainability Tool (FaST) and recent regulations like the IFS, SAIO, FSDN and CRCF!; b) The CAP (2023-27) has not significantly moved from a “compliance model” to a performance model” since farmers still have to provide detailed annual information in IACS,  Digital Farm Books and Area Monitoring Systems etc. c) Result and Output indicators in the CAP “Performance, Monitoring and Evaluation Framework” track targets, expenditures, areas and beneficiaries relating to around 950 interventions of Member States related to Articles 31, 70 and 74-75 of the CAP Regulation.  But there is multiple allocation of these statistics to Result Indicators and to Specific Objectives .. leading to double-counting.; d) A suite of quantitative “Impact Indicators” is needed for EU Agriculture, driven by data collected at field, farm or municipality scale (NUTS4) and which can monitor the impact of specific CAP measures or interventions (including forestry). e) The Soil Monitoring and Forest Monitoring Regulation provide a range of standard indicators and methodologies, but should comply with definitions already used by Member States in annual GHG reporting and UNFCCC Accords.
description: EURAF Pollicy Briefing #69
Everware toolkit. Supporting reproducible science and challenge-driven education
Creators: name: Ustyuzhanin, Andrey
name: Head, Timothy Daniel
name: Babuschkin, Igor
name: Tiunov, Alexander
Publisher: name: arXiv
Year: 2017
Subjects: subject: Computers and Society (cs.CY)
subject: Distributed, Parallel, and Cluster Computing (cs.DC)
subject: FOS: Computer and information sciences

description: Modern science clearly demands for a higher level of reproducibility and collaboration. To make research fully reproducible one has to take care of several aspects: research protocol description, data access, environment preservation, workflow pipeline, and analysis script preservation. Version control systems like git help with the workflow and analysis scripts part. Virtualization techniques like Docker or Vagrant can help deal with environments. Jupyter notebooks are a powerful platform for conducting research in a collaborative manner. We present project Everware that seamlessly integrates git repository management systems such as Github or Gitlab, Docker and Jupyter helping with a) sharing results of real research and b) boosts education activities. With the help of Everware one can not only share the final artifacts of research but all the depth of the research process. This been shown to be extremely helpful during organization of several data analysis hackathons and machine learning schools. Using Everware participants could start from an existing solution instead of starting from scratch. They could start contributing immediately. Everware allows its users to make use of their own computational resources to run the workflows they are interested in, which leads to higher scalability of the toolkit.
Supplementary document for Large Reconfigurable Quantum Circuits with SPAD Arrays and Multimode Fibers - 6782757.pdf
Creators: name: Makowski, Adrian
name: Dabrowski, Michal
name: Antolovic, Ivan Michel
name: Bruschini, Claudio
name: Defienne, Hugo
name: Charbon, Edoardo
name: Lapkiewicz, Radek
name: Gigan, Sylvain
Publisher: name: Optica Publishing Group
Year: 2024
Subjects: Uncategorized

description: Supplementary document 1
Supplementary document for Large reconfigurable quantum circuits with SPAD arrays and multimode fibers - 6820240.pdf
Creators: name: Makowski, Adrian
name: Dabrowski, Michal
name: Antolovic, Ivan Michel
name: Bruschini, Claudio
name: Defienne, Hugo
name: Charbon, Edoardo
name: Lapkiewicz, Radek
name: Gigan, Sylvain
Publisher: name: Optica Publishing Group
Year: 2024
Subjects: Uncategorized

description: Supplemental document
Deuterium fractionation and H2D+ evolution in turbulent and magnetized cloud cores
Creators: name: Körtgen, Bastian
name: Bovino, Stefano
name: Schleicher, Dominik R. G.
name: Giannetti, Andrea
name: Banerjee, Robi
Publisher: name: arXiv
Year: 2017
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: High-mass stars are expected to form from dense prestellar cores. Their precise formation conditions are widely discussed, including their virial condition, which results in slow collapse for super-virial cores with strong support by turbulence or magnetic fields, or fast collapse for sub-virial sources. To disentangle their formation processes, measurements of the deuterium fractions are frequently employed to approximately estimate the ages of these cores and to obtain constraints on their dynamical evolution. We here present 3D magneto-hydrodynamical simulations including for the first time an accurate non-equilibrium chemical network with 21 gas-phase species plus dust grains and 213 reactions. With this network we model the deuteration process in fully depleted prestellar cores in great detail and determine its response to variations in the initial conditions. We explore the dependence on the initial gas column density, the turbulent Mach number, the mass-to-magnetic flux ratio and the distribution of the magnetic field, as well as the initial ortho-to-para ratio of H2. We find excellent agreement with recent observations of deuterium fractions in quiescent sources. Our results show that deuteration is rather efficient, even when assuming a conservative ortho-to-para ratio of 3 and highly sub-virial initial conditions, leading to large deuterium fractions already within roughly a free-fall time. We discuss the implications of our results and give an outlook to relevant future investigations.
description: submitted to MNRAS, 26 pages, 15 figures, comments welcome
Relationship between frequency power spectra and intermittent, large-amplitude bursts in the Alcator C-Mod scrape-off layer
Creators: name: Theodorsen, A.
name: Garcia, O. E.
name: Kube, R.
name: LaBombard, B.
name: Terry, J. L.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Plasma Physics (physics.plasm-ph)
subject: FOS: Physical sciences

description: Fluctuations in the boundary region of the Alcator C-Mod tokamak have been analyzed using gas puff imaging data from a set of Ohmically heated plasma density scan experiments. It is found that the relative fluctuation amplitudes are modest and close to normally distributed at the separatrix but become increasingly larger and intermittent towards the main chamber wall. The frequency power spectra are nevertheless similar for all radial positions and line-averaged densities. Predictions of a stochastic model, describing the plasma fluctuations as a super-position of uncorrelated pulses, are shown to be in excellent agreement with the measurements. This implies that the pulse duration is the same, while the degree of pulse overlap decreases radially outwards in the scrape-off layer. The model also describes the rate of threshold level crossings, which provide novel predictions of plasma--wall interactions due to transient transport events.
description: 8 figures
The Fastest Galaxy Evolution in an Unbiased Compact Group Sample with WISE
Creators: name: Lee, Gwang-Ho
name: Hwang, Ho Seong
name: Sohn, Jubee
name: Lee, Myung Gyoon
Publisher: name: arXiv
Year: 2017
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We study the mid-infrared (MIR) properties of galaxies in compact groups and their environmental dependence using the \textit{Wide-field Infrared Survey Explorer (WISE)} data. We use a volume-limited sample of 670 compact groups and their 2175 member galaxies with $M_r< -19.77$ and $0.01
description: 17 pages, 14 figures, 3 tables, accepted for publication in ApJ
High resolution Monte Carlo study of the Domb-Joyce model
Creators: name: Clisby, Nathan
Publisher: name: arXiv
Year: 2017
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: We study the Domb-Joyce model of weakly self-avoiding walks on the simple cubic lattice via Monte Carlo simulations. We determine to excellent accuracy the value for the interaction parameter which results in an improved model for which the leading correction-to-scaling term has zero amplitude.
description: 10 pages, 2 figures, 9 tables
grim: A Flexible, Conservative Scheme for Relativistic Fluid Theories
Creators: name: Chandra, Mani
name: Foucart, Francois
name: Gammie, Charles F.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: Hot, diffuse, relativistic plasmas such as sub-Eddington black hole accretion flows are expected to be collisionless, yet are commonly modeled as a fluid using ideal general relativistic magnetohydrodynamics (GRMHD). Dissipative effects such as heat conduction and viscosity can be important in a collisionless plasma and will potentially alter the dynamics and radiative properties of the flow from that in ideal fluid models; we refer to models that include these processes as Extended GRMHD. Here we describe a new conservative code, grim, that enables all the above and additional physics to be efficiently incorporated. grim combines time evolution and primitive variable inversion needed for conservative schemes into a single step using an algorithm that only requires the residuals of the governing equations as inputs. This algorithm enables the code to be physics agnostic as well as flexibility regarding time-stepping schemes. grim runs on CPUs, as well as on GPUs, using the same code. We formulate a performance model, and use it to show that our implementation runs optimally on both architectures. grim correctly captures classical GRMHD test problems as well as a new suite of linear and nonlinear test problems with anisotropic conduction and viscosity in special and general relativity. As tests and example applications, we resolve the shock substructure due to the presence of dissipation, and report on relativistic versions of the magneto-thermal instability and heat flux driven buoyancy instability, which arise due to anisotropic heat conduction, and of the firehose instability, which occurs due to anisotropic pressure (i.e. viscosity). Finally, we show an example integration of an accretion flow around a Kerr black hole, using Extended GRMHD.
Die Effizienz der Humboldtschen Universität – Eine empirische Analyse über Verbundeffekte und organisationale Unterschiedlichkeit im deutschen Hochschulwesen
Creators: name: Kemper, Lorenz Bernhard
Publisher: name: Karlsruhe
Year: 2020
Subjects: Humboldtsches Bildungsideal
Hochschuleffizienz
Stochastic Frontier Analysis
Hochschulforschung
Institutionenökonomik
Humboldtian ideal
Efficiency in Higher Education
Higher Education Research
Institutional Economics

description: Das Humboldtsche Organisationsideal betont die Bedeutung der Vielseitigkeit für den Erfolg von Hochschulen. Nach diesem Ideal sollte eine Hochschule thematisch alle Disziplinen der Wissenschaft unter einem organisationalen Dach vereinen und funktional sowohl in der Lehre als auch in der Forschung aktiv sein. Die ökonomische Perspektive hinterfragt diesen organisationalen Alleskönner. Sie stellt ihm die produktivitätssteigernde Bedeutung der Spezialisierung entgegen, nach der sich eine Hochschule vor allem auf einzelne Spitzenbereiche fokussieren sollte. Diese Dissertation beschäftigt sich mit der vermeintlichen Kollision der beiden Prinzipien. Zunächst betrachtet die Arbeit sowohl die innere als auch die äußere Unterschiedlichkeit von deutschen Hochschulen aus einer deskriptiven Perspektive. Zur Untersuchung der äußeren Unterschiedlichkeit wird in dieser Arbeit eine umfassende Klassifizierung der Hochschullandschaft erstellt, mithilfe derer verschiedene latente Hochschultypen im deutschen Hochschulsystem identifiziert werden können. Die innere Unterschiedlichkeit wird hingegen mit einer indexbasierten Analyse untersucht, die die Entwicklung der programmatischen Diversität verschiedener Hochschultypen nachzeichnet. Zuletzt untersucht diese Dissertation im Rahmen eines ökonometrischen Input-Output Modells (Stochastic Frontier Analysis), ob die innere Diversität von Hochschulen einen Einfluss auf die finanzwissenschaftliche Effizienz von Hochschulorganisationen nimmt. Die geschätzte Produktionsfunktion weist darauf hin, dass Synergien zwischen bestimmten Fach- und Funktionskombinationen herrschen. Damit kommt diese Arbeit zu dem Schluss, dass breit aufgestellte Universitäten in Deutschland tendenziell effizienter arbeiten.
MOESM5 of Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes
Creators: name: Strouhal, Michal
name: Oppelt, Jan
name: Mikalová, Lenka
name: Arora, Natasha
name: Nieselt, Kay
name: González-Candelas, Fernando
name: Šmajs, David
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology

description: Additional file 5. Number of SNVs from whole genome alignments produced by NUCmer. Only SNVs detected in all analyzed genomes (i.e., positions with the “N” base in any of the compared genomes were not considered) were used in the analysis. Genes tp0433 (arp), tp0470, and tp0897 (tprK) were excluded from analyses. Chinese strains are shown in bold.
Additional file 9: Figure S3. of Pangenome analyses of the wheat pathogen Zymoseptoria tritici reveal the structural basis of a highly plastic eukaryotic genome
Creators: name: ClĂŠmence Plissonneau
name: Hartmann, Fanny
name: Croll, Daniel
Publisher: name: figshare
Year: 2018
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Gene ontology enrichment for biological process terms performed for singleton, accessory, and core genes of the Zymoseptoria tritici pangenome. (PDF 241Â kb)
Redefining pachymetra root rot management strategies and cultivar resistance in commercial sugarcane fields
Creators: name: Jensen, Alison S
Publisher: name: CQUniversity
Year: 2022
Subjects: subject: 70305 Crop and Pasture Improvement (Selection and Breeding)
subject: FOS: Agriculture, forestry and fisheries
subject: 70308 Crop and Pasture Protection (Pests, Diseases and Weeds)
subject: 60704 Plant Pathology
subject: FOS: Biological sciences

description: Pachymetra chaunorhiza is an important soilborne pathogen of sugarcane and is found only in Australia. Pachymetra root rot is managed primarily by growing resistant cultivars, which are chosen for planting based on oospore levels in the soil. This management strategy does not account for differences in virulence among Pachymetra populations, despite previous research demonstrating that two genetically distinct groups of Pachymetra occur, which may differ in pathogenicity. Higher than expected yield losses have been associated with high oospore levels under some cultivars with intermediate resistance to the pathogen. Increased virulence of Pachymetra towards specific cultivars, following long-term exposure to that cultivar, could explain these reports of high yield losses in intermediate cultivars. This research project aimed to deliver knowledge of the genetic and pathogenic variation among Pachymetra populations in different growing regions and following long-term exposure to different cultivars. The level of genetic and pathogenic variation among Pachymetra populations and the factors contributing to pachymetra root rot were investigated in a series of field trials, glasshouse experiments and laboratory molecular analyses. Results from field experiments generally support the current guidelines used for Pachymetra management. No evidence was found to support the hypothesis that planting the same intermediate cultivar over multiple crop cycles could lead to higher than expected yield losses due to pachymetra root rot. Yield losses of 17 percent were associated with continual cropping of Q208A in a field trial near Bundaberg, in the southern Queensland sugarcane-growing region. A range of putative Pachymetra genes were identified which could play a role in pathogenicity. Collectively, the findings from this research supported the conclusion that two genetically distinct groups of Pachymetra occur in growing regions a) north of Townsville and b) south of Townsville, as previously reported. Three potential native hosts of Pachymetra were also identified, including Themeda australis and this finding supports the theory that lighter soil types are conducive to pachymetra root rot.
Additional file 8: Figure S2. of Pangenome analyses of the wheat pathogen Zymoseptoria tritici reveal the structural basis of a highly plastic eukaryotic genome
Creators: name: ClĂŠmence Plissonneau
name: Hartmann, Fanny
name: Croll, Daniel
Publisher: name: figshare
Year: 2018
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Plant Biology

description: Gene ontology enrichment for cellular compartment terms performed for singleton, accessory, and core genes of the Zymoseptoria tritici pangenome. (PDF 164Â kb)
Additional file 2 of MetaGeneBank: a standardized database to study deep sequenced metagenomic data from human fecal specimen
Creators: name: Shao, Li
name: Liao, Jie
name: Qian, Jingyang
name: Chen, Wenbin
name: Fan, Xiaohui
Publisher: name: figshare
Year: 2021
Subjects: subject: Information Systems
subject: FOS: Computer and information sciences

description: Additional file 2 : Figure S2. An example of KO hierarchies A, B, C, and D.
High-Frequency Analysis of Effective Interactions and Bandwidth for Transient States after Monocycle Pulse Excitation of Extended Hubbard Model
Creators: name: Yonemitsu, Kenji
Publisher: name: arXiv
Year: 2017
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: Using a high-frequency expansion in periodically driven extended Hubbard models, where the strengths and ranges of density-density interactions are arbitrary, we obtain the effective interactions and bandwidth, which depend sensitively on the polarization of the driving field. Then, we numerically calculate modulations of correlation functions in a quarter-filled extended Hubbard model with nearest-neighbor interactions on a triangular lattice with trimers after monocycle pulse excitation. We discuss how the resultant modulations are compatible with the effective interactions and bandwidth derived above on the basis of their dependence on the polarization of photoexcitation, which is easily accessible by experiments. Some correlation functions after monocycle pulse excitation are consistent with the effective interactions, which are weaker or stronger than the original ones. However, the photoinduced enhancement of anisotropic charge correlations previously discussed for the three-quarter-filled organic conductor $α$-(bis[ethylenedithio]-tetrathiafulvalene)$_2$I$_3$ [$α$-(BEDT-TTF)$_2$I$_3$] in the metallic phase is not fully explained by the effective interactions or bandwidth, which are derived independently of the filling.
description: 21 pages, 6 figures, accepted for publication in J. Phys. Soc. Jpn
Additional file 3 of MetaGeneBank: a standardized database to study deep sequenced metagenomic data from human fecal specimen
Creators: name: Shao, Li
name: Liao, Jie
name: Qian, Jingyang
name: Chen, Wenbin
name: Fan, Xiaohui
Publisher: name: figshare
Year: 2021
Subjects: subject: Information Systems
subject: FOS: Computer and information sciences

description: Additional file 3 : Figure S3. The PCA score plots for microbial abundance in phylum level. (a) The score plot for microbial abundance of all healthy controls colored according to sequencing platforms. (b-d) The score plot for microbial abundance of healthy controls sequenced in BGI center and with HiSeq 2000 platform. The solid circles in (b-d) are colored according to assays, sample collection strategies, and sample collection countries, respectively.
Intraspecific variation in the leaf traits and decomposition of estuarine primary producers across spatial gradients
Creators: name: Ainley, Lara Beth
Publisher: name: Macquarie University
Year: 2022
Subjects: Other education not elsewhere classified

description: Decomposition is a key process for carbon and nutrient cycles. Hence, understanding how biotic and abiotic factors interact to control decomposition is an important avenue of ecological research. This thesis investigated how climatic setting and nutrient enrichment directly and, via effects on leaf traits, indirectly influence the decomposition of two key estuarine primary producers, the seagrass Zostera muelleri and the mangrove Avicennia marina. It then considered how differences in decomposition processes among climatic settings influence the structure of benthic communities. Sampling within 16 estuaries spanning 7° of latitude, and varying in anthropogenic nutrient loading, revealed that the seagrass and mangrove displayed latitudinal variation in leaf traits, which in many instances differed between the two species. Nutrient statuses of estuaries were, by contrast, a poor predictor of leaf traits and the relationship between leaf traits and nutrient loading was highly temporally variable. Nevertheless, latitude and nutrient status of estuaries interacted to influence the decomposition rate of litter from a common source, perhaps due to spatial variation in decomposer communities. Further, at a common site, litter sources from high and low latitudes differed in decomposition rate, although relationships differed between the two species of macrophyte. Spatial variation in mineralization of detritus, resulting from differences in climate and unidentified factors, lead to spatially variable effects of organic enrichment on benthic communities. Overall, this study found that climatic setting and nutrient enrichment can act synergistically to influence decomposition processes via a combination of direct and indirect effects. Nevertheless, the relationship between decomposition processes and environmental factors differed markedly between the two co-occurring estuarine primary producers considered by this study. Hence, intraspecific variability in decomposition processes cannot be reliably predicted by broad-scale interspecific patterns.
MOESM3 of Reanalysis of Chinese Treponema pallidum samples: all Chinese samples cluster with SS14-like group of syphilis-causing treponemes
Creators: name: Strouhal, Michal
name: Oppelt, Jan
name: Mikalová, Lenka
name: Arora, Natasha
name: Nieselt, Kay
name: González-Candelas, Fernando
name: Šmajs, David
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 3. Genome coverage statistics for individual Chinese strains. Sequencing reads derived from the Chinese strains SRA data were mapped to the TPA SS14 and Nichols reference genomes [6]. The number of bases with a coverage depth of 1 or more, number of bases with more than 10× coverage depth and average/median coverage depth are shown. Statistics were calculated from previously post-processed mappings; repetitive and homologous regions and PCR duplicated reads were excluded from statistical analysis.
Review of QCD, QGP, Heavy Quark Meson Production Enhancement and Suppression
Creators: name: Kisslinger, Leonard S.
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: This review of the Quantum Chromodynamics (QCD),the early universe Cosmoloical Phase Transition from the Quark-Gluon Plasma (QGP) to our present universe (QCDPT), Relativistic Heavy Ion Collisions (RHIC) which can produce the QGP, the possible detection of the QGP produced by the production of mixed hybrid heavy quark mesons. We also review recent studies of the production of mixed heavy quark hybrids via RHIC and heavy quark meson supression in p-Pb and Pb-Pb collisions.
description: 20 paages, 12 figures
Additional file 4 of MetaGeneBank: a standardized database to study deep sequenced metagenomic data from human fecal specimen
Creators: name: Shao, Li
name: Liao, Jie
name: Qian, Jingyang
name: Chen, Wenbin
name: Fan, Xiaohui
Publisher: name: figshare
Year: 2021
Subjects: subject: Information Systems
subject: FOS: Computer and information sciences

description: Additional file 4 : Table S1. The distribution of samples per disease and country.
Improved method to determine the integrated properties of nuclear rings: NGC 1512
Creators: name: Ma, Chao
name: de Grijs, Richard
name: Ho, Luis C.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: The integrated properties of nuclear rings are correlated with their host galaxy's secular evolution and its dynamics, as well as with the formation and evolution of the ring's star cluster population(s). Here we present a new method to accurately measure the spectral energy distribution and current star-formation rate (SFR) of the nuclear ring in the barred spiral galaxy NGC 1512 based on high-resolution {\sl Hubble} and {\sl Spitzer Space Telescope} images. Image degradation does not have a significant negative effect on the robustness of the results. To obtain the ring's SFR for the period spanning $\sim$3--10 Myr, we apply our method to the continuum-subtracted H$α$ and 8 $μ$m images. The resulting SFR surface density, $Σ_{\rm SFR}$=$0.09\, {M}_{\odot} \,{\rm yr}^{-1}$ ${\rm kpc}^{-2}$, which is much higher than the disk-averaged SFR densities in normal galaxies. We also estimate the ring's total stellar mass, log (${M}/{M}_{\odot}$) = 7.1 $\pm$ 0.11 for an average age of $\sim$40 Myr.
description: 7 pages, 6 figures; accepted in ApJS
Additional file 1 of MetaGeneBank: a standardized database to study deep sequenced metagenomic data from human fecal specimen
Creators: name: Shao, Li
name: Liao, Jie
name: Qian, Jingyang
name: Chen, Wenbin
name: Fan, Xiaohui
Publisher: name: figshare
Year: 2021
Subjects: subject: Information Systems
subject: FOS: Computer and information sciences

description: Additional file 1 : Figure S1. An illustration of ‘Microbiome’ (a) and ‘Function’ (b) search modes and corresponding outputs.
title: ADCO, Septième cartulaire de Saint-Étienne de Dijon (1661-1665), Cart. 29 (G 134), 996 folios, f. 0004
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi
subject: cartulaire
subject: Chartes de la Bourgogne du Moyen Âge
subject: LaMOP

description: Septième cartulaire de Saint-Étienne de Dijon (1661-1665), Archives départementales de la Côte-d'Or, Cart. 29 (G 134), 996 folios, f. 0004, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Septième cartulaire de Saint-Étienne de Dijon (1661-1665), Archives départementales de la Côte-d'Or, Cart. 29 (G 134), 996 folios, f. 0004, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https://manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
Additional file 7: Figure S1. of Pangenome analyses of the wheat pathogen Zymoseptoria tritici reveal the structural basis of a highly plastic eukaryotic genome
Creators: name: ClĂŠmence Plissonneau
name: Hartmann, Fanny
name: Croll, Daniel
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Sequence coverage of Illumina short reads generated from the isolates 3D1, 3D7, 1A5, and 1E4 mapped against the IPO323 genome. For each IPO323 gene, the mean coverage was calculated. The median coverage of all genes of a specific isolate is shown by a vertical bar. (PDF 118Â kb)