cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
RENDERING CONNECTION: SYMBIOSIS THROUGH OVERLAPPING AND LAYERING
Creators: name: YANG, HAOMIN
Publisher: name: Digital Repository at the University of Maryland
Year: 2016
Subjects: subject: Architecture
subject: FOS: Civil engineering

description: This thesis seeks to create a space that enables social energy in traditional senior apartments by overlapping with another program, the animal center. Animals, as spiritual beings, may help ease stress and loneliness in the elderly. Also, animals can be seen as catalysts for intergenerational activities between residents and adopters.

Architecture has ability to integrate two categories social beings that have both been isolated and neglected. Spatial and temporal devices of overlapping and layering have the potential to relate or unite disparate elements in an interdependent and mutually reinforcing connection. Through rearranging, overlapping and layering programs that are often co-existent in contemporary society, architecture can keep the elderly and animals active and engaged.

The site for this project is in China. China currently struggles with a series of issues relating to populations of both the aging and of animals.  In China, as the population shifts from the country to the cities, senior citizens are increasingly socially isolated.  At the same time, animal overpopulation, particularly dogs, becomes more of a problem each year. The final project offers a design that seeks to socially integrate seniors into the larger community, creating opportunities for residents to meet and mingle with other people from the surrounding communities.
sj-pdf-2-trc-10.1177_1940082920951912 - Supplemental material for Drill-Cored Artificial Rock Pools Can Promote Biodiversity and Enhance Community Structure on Coastal Rock Revetments at Reclaimed Coastlines of Penang, Malaysia
Creators: name: S. Y. Chee
name: J. L. S. Wee
name: C. Wong
name: J. C. Yee
name: Y. Yusup
name: A. Mujahid
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Geography
subject: 120505 Regional Analysis and Development
subject: FOS: Social and economic geography

description: Supplemental material, sj-pdf-2-trc-10.1177_1940082920951912 for Drill-Cored Artificial Rock Pools Can Promote Biodiversity and Enhance Community Structure on Coastal Rock Revetments at Reclaimed Coastlines of Penang, Malaysia by S. Y. Chee, J. L. S. Wee, C. Wong, J. C. Yee, Y. Yusup and A. Mujahid in Tropical Conservation Science
Additional file 7 of Low expression of the dynamic network markers FOS/JUN in pre-deteriorated epithelial cells is associated with the progression of colorectal adenoma to carcinoma
Creators: name: Huang, Xiaoqi
name: Han, Chongyin
name: Zhong, Jiayuan
name: Hu, Jiaqi
name: Jin, Yabin
name: Zhang, Qinqin
name: Luo, Wei
name: Liu, Rui
name: Ling, Fei
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 7: Figure S7. Heatmap and dot plot of GDF, CEACAM and GRN signaling pathway.
neuSIM4: A comprehensive GEANT4 based neutron simulation code
Creators: name: Park, J.
name: Teh, F. C. E.
name: Tsang, M. B.
name: Brown, K. W.
name: Chajecki, Z.
name: Hong, B.
name: Lokotko, T.
name: Lynch, W. G.
name: Wieske, J.
name: Zhu, K.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Instrumentation and Detectors (physics.ins-det)
subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: A new neutron SIMulation program based on the versatile GEANT4 toolkit, neuSIM4, has been developed to describe interactions of neutrons in the NE213 liquid scintillator from 0.1 to 3000 MeV. neuSIM4 is designed to accommodate complicated modern detector geometry setups with multiple scintillator detectors, each of which can be outfitted with more than one photo-multiplier. To address a broad spectrum of neutron energies, two new neutron interaction physics models, KSCIN and NxQMD, have been implemented in GEANT4. For neutrons with energy below 110 MeV, we incorporate a total of eleven neutron induced reaction channels on hydrogen and carbon nuclei, including nine carbon inelastic reaction channels, into KSCIN. Beyond 110 MeV, we implement a neutron induced reaction model, NxQMD, in GEANT4. We use its results as reference to evaluate other neutron-interaction physics models in GEANT4. We find that results from an existing cascade physics model (INCL) in GEANT4 agree very well with the results from NxQMD, and results from both codes agree with new and existing light response data. To connect KSCIN to NxQMD or INCL, we introduce a transition region where the contribution of neuSIM4 linearly decreases with corresponding increased contributions from NxQMD or INCL. To demonstrate the application of the new code, we simulate the light response and performance of a 2 x 2 m2 neutron detector wall array consisting of 25 2m-long scintillation bars. We are able to compare the predicted light response functions to the shape of the experimental response functions and calculate the efficiency of the neutron detector array for neutron energies up to 200 MeV. These simulation results will be pivotal for understanding the performance of modern neutron arrays with intricate geometries, especially in the measurements of neutron energy spectra in heavy-ion reactions.
Additional file 1 of Immunological characteristics of immunogenic cell death genes and malignant progression driving roles of TLR4 in anaplastic thyroid carcinoma
Creators: name: Xu, Tong
name: Zhu, Chaozhuang
name: Song, Feifeng
name: Zhang, Wanli
name: Yuan, Mengnan
name: Pan, Zongfu
name: Huang, Ping
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Supplementary Material 1: The row bands of western blot
The aspherical explosions of the 03fg-like Type Ia supernovae 2021zny and 2022ilv revealed by polarimetry
Creators: name: Nagao, T.
name: Maeda, K.
name: Mattila, S.
name: Kuncarayakti, H.
name: Gutierrez, C. P.
name: Cikota, A.
Publisher: name: arXiv
Year: 2024
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: A peculiar subtype of Type Ia supernovae (SNe), 03fg-like (super-Chandrasekhar) SNe, show different observational properties from prototypical Type Ia SNe, typically having high luminosity at the light-curve peak, low expansion velocities, and strong carbon features. The origin of this class of Type Ia SNe has been actively debated. Recent nebular-phase infrared observations of the 03fg-like Type Ia SN 2022pul using the James Webb Space Telescope revealed large-scale asymmetries in the ejecta and the presence of the strong [Ne II] line at 12.81 $μ$m, suggesting a violent merger of two white dwarfs as its origin. Polarimetry is another powerful tool to study overall ejecta asymmetries of spatially-unresolved SNe. Here, we aim to check the universality of the violent merger scenario as the origin of the 03fg-like Type Ia SNe, by studying their explosion geometries using polarimetry. In this letter, we present imaging-polarimetric observations of the two 03fg-like Type Ia SNe 2021zny and 2022ilv. SNe 2021zny and 2022ilv show high intrinsic polarization ($\sim1$ % -$\sim2$ %), which might be composed of multiple components with different polarization angles. This indicates that they have complex aspherical structures in their ejecta, supporting the violent merger scenario for their origin. Our observations provide the first clear evidence from polarimetry for such aspherical structures.
description: 6 pages, 4 figures, submitted to A&A Letters
Data Repositories: Standing on the Shoulders of Giants
Creators: name: Gonzalez, Sarah
Publisher: name: Zenodo
Year: 2023
Subjects: World Data System
Data Repositories
Action Plan
Mission
Membership

description: A presentation at the Research Data Access and Preservation (RDAP) Virtual Summit by World Data System International Program Office Program Manager Sarah Gonzalez on the WDS Action Plan for 2022-2024.
XIX-asr boshlarida Samarqand  tarixi
Creators: name: J.Mustafayev, Malikjon Mamadiyorov Anvarivich, TATU SF
Publisher: name: Zenodo
Year: 2024

description: BSTRACT At the beginning of the 19th century, Samarkand was a city with many historical traditions. During this period, it was in practice among the armies of Samarkand, Kazakh Empire and China. The city became a protectorate of the Kazakh Empire at the beginning of the 19th century, but later Chinese troops overran Samarkand.
Table_supplementary_1 – Supplemental material for Factors Associated with Functional Capacity in CKD Patients
Creators: name: Gravina, Emanuele Poliana Lawall
name: Pinheiro, Bruno Valle
name: Jesus, Luciana Angélica Da Silva
name: Fabrício Sciammarella Barros
name: Lucinda, Leda Marília Fonseca
name: Colugnati, Fernando Antonio Basile
name: Segura-Ortí, Eva
name: Maycon Moura Reboredo
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111099 Nursing not elsewhere classified
subject: FOS: Health sciences

description: Supplemental material, Table_supplementary_1 for Factors Associated with Functional Capacity in CKD Patients by Emanuele Poliana Lawall Gravina, Bruno Valle Pinheiro, Luciana Angélica da Silva Jesus, Fabrício Sciammarella Barros, Leda Marília Fonseca Lucinda, Fernando Antonio Basile Colugnati, Eva Segura-Ortí and Maycon Moura Reboredo in Clinical Nursing Research
Optical conductivity of the metallic pyrochlore iridate Pr$_2$Ir$_2$O$_7$: Influence of spin-orbit coupling and electronic correlations on the electronic structure
Creators: name: Kumar, Harish
name: Köpf, M.
name: Telang, P.
name: Bura, N.
name: Jesche, A.
name: Gegenwart, P.
name: Kuntscher, C. A.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The synergy of strong spin-orbit coupling and electron-electron interactions gives rise to unconventional topological states, such as topological Mott insulator, Weyl semimetal, and quantum spin liquid. In this study, we have grown single crystals of the pyrochlore iridate Pr$_2$Ir$_2$O$_7$ and explored its magnetic, lattice dynamical, and electronic properties. While Raman spectroscopy data reveal six phonon modes confirming the cubic \textit{Fd$\bar{3}$m} crystal symmetry, dc magnetic susceptibility data show no anomalies and hence indicate the absence of magnetic phase transitions down to 2~K. Both temperature-dependent electric transport and optical conductivity data reveal the metallic character of Pr$_2$Ir$_2$O$_7$. The optical conductivity spectrum contains a mid-infrared absorption band, which becomes more pronounced with decreasing temperature due to spectral weight transfer from high to low energies. The presence of the mid-infrared band hints at the importance of correlation physics. The optical response furthermore suggests that Pr$_2$Ir$_2$O$_7$ is close to the Weyl semimetal phase.
description: 11 pages, 8 figures, accepted for publication in Phys. Rev. B
Deep Learning-based Depth Estimation Methods from Monocular Image and Videos: A Comprehensive Survey
Creators: name: Rajapaksha, Uchitha
name: Sohel, Ferdous
name: Laga, Hamid
name: Diepeveen, Dean
name: Bennamoun, Mohammed
Publisher: name: arXiv
Year: 2024
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences
subject: I.2.10; I.4; I.5.1; I.4.8

description: Estimating depth from single RGB images and videos is of widespread interest due to its applications in many areas, including autonomous driving, 3D reconstruction, digital entertainment, and robotics. More than 500 deep learning-based papers have been published in the past 10 years, which indicates the growing interest in the task. This paper presents a comprehensive survey of the existing deep learning-based methods, the challenges they address, and how they have evolved in their architecture and supervision methods. It provides a taxonomy for classifying the current work based on their input and output modalities, network architectures, and learning methods. It also discusses the major milestones in the history of monocular depth estimation, and different pipelines, datasets, and evaluation metrics used in existing methods.
description: 46 pages, 10 figures, The paper has been accepted for publication in ACM Computing Surveys 2024
ELIXIR-Norway-Training/DMP-writing-workshop: DMP Workshop March 2025
Creators: name: Fatima, Nazeefa
name: Bianchini, Federico
name: Vera Ponce de Leon, Arturo
name: Åberg, Espen
name: Ostrop, Jenny
name: Hjerde, Erik
name: Ane Møller, Gabrielsen
name: Fossum-Raunehaug, Solveig
name: Vollan, Erik Axel
name: Bösl, Korbinian
Publisher: name: Zenodo
Year: 2025
Subjects: subject: Data Management
subject: Research Data Management
subject: Data Management Planning

description: Slides from Life Science Data Management: Planning (Workshop) online 2025-03-18
title: The Use of Teaching Proficiency through Reading and Storytelling (TPRS) to Promote English Reading Aloud of Young Learners
Creators: name: Thanchanok Manchakapate
Publisher: name: Faculty of Liberal Arts, Prince of Songkla University
publisherIdentifierScheme: ROR
Year: 2025
Subjects: Teaching Proficiency through Reading and Storytelling (TPRS)
English reading aloud
Storytelling

description: Journal of Liberal Arts, Prince of Songkla University, 17, 1, 281505, pp.1-17
title: การพัฒนาผลิตภัณฑ์ขนมขบเคี้ยวจากส่วนเหลือทิ้งของหน่อไม้
Creators: name: เปรมประชา ดรชัย
Publisher: name: คณะเทคโนโลยีการเกษตร มหาวิทยาลัยราชภัฏมหาสารคาม
publisherIdentifierScheme: ROR
Year: 2025
Subjects: ขนมขบเคี้ยว
การพัฒนาผลิตภัณฑ์
ผลพลอยได้จากกระบวนการผลิต

description: วารสารเกษตรพระวรุณ, 22, 1, 48-56
Dense Retrieval with Continuous Explicit Feedback for Systematic Review Screening Prioritisation
Creators: name: Mao, Xinyu
name: Zhuang, Shengyao
name: Koopman, Bevan
name: Zuccon, Guido
Publisher: name: arXiv
Year: 2024
Subjects: subject: Information Retrieval (cs.IR)
subject: FOS: Computer and information sciences

description: The goal of screening prioritisation in systematic reviews is to identify relevant documents with high recall and rank them in early positions for review. This saves reviewing effort if paired with a stopping criterion, and speeds up review completion if performed alongside downstream tasks. Recent studies have shown that neural models have good potential on this task, but their time-consuming fine-tuning and inference discourage their widespread use for screening prioritisation. In this paper, we propose an alternative approach that still relies on neural models, but leverages dense representations and relevance feedback to enhance screening prioritisation, without the need for costly model fine-tuning and inference. This method exploits continuous relevance feedback from reviewers during document screening to efficiently update the dense query representation, which is then applied to rank the remaining documents to be screened. We evaluate this approach across the CLEF TAR datasets for this task. Results suggest that the investigated dense query-driven approach is more efficient than directly using neural models and shows promising effectiveness compared to previous methods developed on the considered datasets. Our code is available at https://github.com/ielab/dense-screening-feedback.
description: Accepted at SIGIR 2024;typos corrected
title: การพัฒนาเครื่องทำให้สารสำคัญจากมะม่วงมีอนุภาคในระดับนาโนโมเลกุล
Creators: name: กานต์ จันทระ
Publisher: name: คณะเทคโนโลยีการเกษตร มหาวิทยาลัยราชภัฏมหาสารคาม
publisherIdentifierScheme: ROR
Year: 2025
Subjects: เครื่องมือสกัด
มะม่วง
ระดับนาโนโมเลกุล

description: วารสารเกษตรพระวรุณ, 22, 1, 57-66
supplemental_figure_3 – Supplemental material for Proteomic analysis of gemcitabine-resistant pancreatic cancer cells reveals that microtubule-associated protein 2 upregulation associates with taxane treatment
Creators: name: Large, Tessa Ya Sung Le
name: Btissame El Hassouni
name: Funel, Niccola
name: Kok, Bart
name: Piersma, Sander R.
name: Pham, Thang V.
name: Olive, Kenneth P.
name: Kazemier, Geert
name: Laarhoven, Hanneke W.M. Van
name: Jimenez, Connie R.
name: Bijlsma, Maarten F.
name: Giovannetti, Elisa
Publisher: name: Figshare
Year: 2019
Subjects: subject: 111299 Oncology and Carcinogenesis not elsewhere classified
subject: FOS: Clinical medicine
subject: 111702 Aged Health Care
subject: FOS: Health sciences
subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: 110203 Respiratory Diseases

description: Supplemental material, supplemental_figure_3 for Proteomic analysis of gemcitabine-resistant pancreatic cancer cells reveals that microtubule-associated protein 2 upregulation associates with taxane treatment by Tessa Ya Sung Le Large, Btissame El Hassouni, Niccola Funel, Bart Kok, Sander R. Piersma, Thang V. Pham, Kenneth P. Olive, Geert Kazemier, Hanneke W.M. van Laarhoven, Connie R. Jimenez, Maarten F. Bijlsma and Elisa Giovannetti in Therapeutic Advances in Medical Oncology
Additional file 1 of Lipolysis and gestational diabetes mellitus onset: a case-cohort genome-wide association study in Chinese
Creators: name: Zhang, Miao
name: Li, Qing
name: Wang, Kai-Lin
name: Dong, Yao
name: Mu, Yu-Tong
name: Cao, Yan-Min
name: Liu, Jin
name: Li, Zi-Heng
name: Cui, Hui-Lu
name: Liu, Hai-Yan
name: Hu, An-Qun
name: Zheng, Ying-Jie
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1. Note S1. Parameters for FUMAGWAS analyses. Note S2. Parameters for WebGestalt analyses. Note S3. Parameters for g:profiler analyses. Table S1. Characteristics of selected or not sub-cohort groups in cohort. Table S2. PCs with P value < 0.01 for SNPs/InDels association analyses. Table S3. Markers in linkage disequilibrium with any independent significant markers (r2 ≥ 0.6). Table S4. Genes mapped by positional mapping, eQTL mapping, and chromatin interaction mapping. Table S5. Protein coding genes from MAGMA gene-based analyses with PBon < 0.05. Table S6. CNVRs associated with GDM FDR with p value < 0.05. Table S7. Candidate genes for gene over-representation analyses. Table S8. Gene sets enriched in the Gene Ontology resource by g: Profiler. Table S9. Genome-wide association studies of GDM reported in literatures and the present study. Figure S1. Profile of the study cohort. Figure S2. Strategies of the analyses. Figure S3. The quantile–quantile plot of P values of SNPs/InDels GWAS (λ=1.01).
Semantically Rich Local Dataset Generation for Explainable AI in Genomics
Creators: name: Barbosa, Pedro
name: Savisaar, Rosina
name: Fonseca, Alcides
Publisher: name: arXiv
Year: 2024
Subjects: subject: Machine Learning (cs.LG)
subject: Neural and Evolutionary Computing (cs.NE)
subject: Genomics (q-bio.GN)
subject: FOS: Computer and information sciences
subject: FOS: Biological sciences

description: Black box deep learning models trained on genomic sequences excel at predicting the outcomes of different gene regulatory mechanisms. Therefore, interpreting these models may provide novel insights into the underlying biology, supporting downstream biomedical applications. Due to their complexity, interpretable surrogate models can only be built for local explanations (e.g., a single instance). However, accomplishing this requires generating a dataset in the neighborhood of the input, which must maintain syntactic similarity to the original data while introducing semantic variability in the model's predictions. This task is challenging due to the complex sequence-to-function relationship of DNA.
 We propose using Genetic Programming to generate datasets by evolving perturbations in sequences that contribute to their semantic diversity. Our custom, domain-guided individual representation effectively constrains syntactic similarity, and we provide two alternative fitness functions that promote diversity with no computational effort. Applied to the RNA splicing domain, our approach quickly achieves good diversity and significantly outperforms a random baseline in exploring the search space, as shown by our proof-of-concept, short RNA sequence. Furthermore, we assess its generalizability and demonstrate scalability to larger sequences, resulting in a ~30% improvement over the baseline.
Additional file 1 of The effect of higher or lower mean arterial pressure on kidney function after cardiac arrest: a post hoc analysis of the COMACARE and NEUROPROTECT trials
Creators: name: Laurikkala, Johanna
name: Ameloot, Koen
name: Reinikainen, Matti
name: Palmers, Pieter-Jan
name: De Deyne, Cathy
name: Bert, Ferdinande
name: Dupont, Matthias
name: Janssens, Stefan
name: Dens, Joseph
name: Hästbacka, Johanna
name: Jakkula, Pekka
name: Loisa, Pekka
name: Birkelund, Thomas
name: Wilkman, Erika
name: Vaara, Suvi T.
name: Skrifvars, Markus B.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Science Policy
subject: Computational Biology

description: Additional file 1: Figure S1. Creatinine and urine output (UO) in the low-normal and high-normal mean arterial pressure target groups during the first five days in the COMACARE (a,c) and Neuroprotect (b,d) trials separately.
korbinib/DMP-writing-workshop: 2020_02_21_Tromso
Creators: name: Bösl, Korbinian
name: Hjerde, Erik
name: Figenschou, Lars
name: Vollan, Erik Axel
name: Willassen, Nils Peder
Publisher: name: Zenodo
Year: 2020
Subjects: Data Mangement
Data Management Plan
Deposition,
Data deposition

description: DMP writing workshop, Tromsø 21.02.2020
description: This work was funded by the ELIXIR.NO (208481/F50) , ELIXIR2 (270068) infrastructure grants and the Centre for Digital Life Norway (248810/O70) through the Research Council of Norway and the University of Tromsø.
Additional file 2 of The effect of higher or lower mean arterial pressure on kidney function after cardiac arrest: a post hoc analysis of the COMACARE and NEUROPROTECT trials
Creators: name: Laurikkala, Johanna
name: Ameloot, Koen
name: Reinikainen, Matti
name: Palmers, Pieter-Jan
name: De Deyne, Cathy
name: Bert, Ferdinande
name: Dupont, Matthias
name: Janssens, Stefan
name: Dens, Joseph
name: Hästbacka, Johanna
name: Jakkula, Pekka
name: Loisa, Pekka
name: Birkelund, Thomas
name: Wilkman, Erika
name: Vaara, Suvi T.
name: Skrifvars, Markus B.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Science Policy
subject: Computational Biology

description: Additional file 2: Figure S2. Median a) percentage and b) count of patients with AKI KDIGO 0, 1 or 2-3 in the low or high MAP treatment groups receiving low or high doses of norepinephrine (NE). The median cut-off value of NE was 0.08 μg/kg/min in the low MAP group and 0.2 μg/kg/min in the high MAP group, p = 0.22.
Thinking Through the Post-Pandemic Supply Chain
Creators: Sherburne, Cary
Publisher: name: University of Alberta Library
Year: 2020

One thing the coronavirus pandemic highlighted is shortcomings in our global supply chains. Post-pandemic, how much effort will be applied to rethinking how we source, manufacture, and distribute?

For some time now, there have been relatively limited efforts at near-shoring work in the textiles and apparel industries. In most cases, this involves using digital technologies to produce smaller lots—even down to a quantity of one. Digital technologies include printing, of course, but in order to cost effectively manufacture a larger number of smaller orders, there is a whole infrastructure eco-system that needs to be established. Creating just one element of the process that is more efficient will cause bottlenecks in the

rest of the process.

Many of these initiatives could be called microfactories, vertically integrated with all manufacturing under one roof—printing, cutting, sewing, fulfillment. But what about order intake? These days, ecommerce is arguably the most efficient way to get orders into the system. However, keep in mind that once you establish an online storefront, you could

be deluged with orders—or receive none at all! A deluge of orders that cannot be processed through manufacturing in a timely fashion leaves customers frustrated and future business growth uncertain. What is needed is a holistic view of the entire operation in order to move from a mass production model to a just-in-time manufacturing model. This transformation has happened in many other industries, and we can do the same in textiles and apparel. Let’s take a look at how some manufacturers are addressing this challenge.
korbinib/DMP-writing-workshop: 2020_03_11_Aas
Creators: name: Fossum-Raunehaug, Solveig
name: Bösl, Korbinian
Publisher: name: Zenodo
Year: 2020
Subjects: Data Management
Data Management Plan
Data Depostion

description: DMP writing workshop, Ås 11.03.2020
description: This work was funded by the ELIXIR.NO (208481/F50) , ELIXIR2 (270068) infrastructure grants and the Centre for Digital Life Norway (248810/O70) through the Research Council of Norway and the Norwegian University for Life Sciences.
korbinib/DMP-writing-workshop: 2020_03_04_Bergen
Creators: name: Humberset, Beate Krøvel
name: Enerstvedt, Kjersti
name: Linde, Tore
name: Bösl, Korbinian
Publisher: name: Zenodo
Year: 2020
Subjects: Data Management, Data Management Plan

description: DMP writing workshop, Bergen 04.03.2020
description: This work was funded by the ELIXIR.NO (208481/F50) , ELIXIR2 (270068) infrastructure grants and the Centre for Digital Life Norway (248810/O70) through the Research Council of Norway and the University of Bergen.
Additional file 3 of The effect of higher or lower mean arterial pressure on kidney function after cardiac arrest: a post hoc analysis of the COMACARE and NEUROPROTECT trials
Creators: name: Laurikkala, Johanna
name: Ameloot, Koen
name: Reinikainen, Matti
name: Palmers, Pieter-Jan
name: De Deyne, Cathy
name: Bert, Ferdinande
name: Dupont, Matthias
name: Janssens, Stefan
name: Dens, Joseph
name: Hästbacka, Johanna
name: Jakkula, Pekka
name: Loisa, Pekka
name: Birkelund, Thomas
name: Wilkman, Erika
name: Vaara, Suvi T.
name: Skrifvars, Markus B.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Science Policy
subject: Computational Biology

description: Additional file 3: Figure S3. Creatinine and urine output (UO) in the low-normal and high-normal mean arterial pressure target groups during the first five days after out-of-hospital cardiac arrest in patients with hypertension. a) Creatinine values of patients with hypertension, b) UO of patients with hypertension.
korbinib/DMP-writing-workshop: 2020_12_01_Trondheim
Creators: name: Heggland, Ingrid
name: Gabrielsen, Ane Møller
name: Skipenes, Heine
name: Skogholt, Anne Heidi
name: Rise, Kjersti
name: Eikemo, Hilde
name: Bösl, Korbinian
Publisher: name: Zenodo
Year: 2020
Subjects: Data management
Data management planning
DMP

description: DMP writing workshop, for Researchers in Trondheim, online 30.11.- 1.12.2020
description: Trademarks, service marks, trade names, logos, icons, and domain names in this presentations are proprietary to their respective owner and are not subject of this license. Reuse of illustrations is indicated on the individual presentation slides.
Exploring new physics in the late Universe's expansion through non-parametric inference
Creators: name: Sabogal, Miguel A.
name: Akarsu, Özgür
name: Bonilla, Alexander
name: Di Valentino, Eleonora
name: Nunes, Rafael C.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: In this study, we investigate deviations from the Planck-$Λ$CDM model in the late universe ($z \lesssim 2.5$) using the Gaussian Processes method, with minimal assumptions. Our goal is to understand where exploring new physics in the late universe is most relevant. We analyze recent Cosmic Chronometers (CC), Type Ia Supernovae (SN), and Baryon Acoustic Oscillations (BAO) data. By examining reconstructions of the dimensionless parameter $δ(z)$, which measures deviations of the Hubble parameter from the Planck-$Λ$CDM predictions, we identify intriguing features at low ($z \lesssim 0.5$) and high ($z \gtrsim 2$) redshifts. Deviations from the Planck-$Λ$CDM model were not significant between $0.5\lesssim z \lesssim2$. Using the combined CC+SN+BAO dataset, we gain insights into dark energy (DE) dynamics, resembling characteristics of omnipotent DE, extending beyond quintessence and phantom models. DE exhibits n-quintessence traits for $z\gtrsim2$, transitioning with a singularity around $z\sim2$ to usual phantom traits in $1\lesssim z\lesssim2$. DE characteristics differ between scenarios ($H_0$-SH0ES and $H_0$-$Λ$\&CMB), with $H_0$-SH0ES leaning towards phantom traits and $H_0$-$Λ$\&CMB towards quintessence. We suggest exploring new physics at $z\lesssim0.5$ and $1.5\lesssim z\lesssim2.5$, particularly around $z = 2$, to understand cosmological tensions such as $H_0$ and $S_8$.
description: 15 pages, 11 figures. Accepted for publication in EPJC
korbinib/DMP-writing-workshop: 2020_12_11_Oslo
Creators: name: Bösl, Korbinian
name: Stangeland, Elin
name: Soligard, Lars
name: Bianchini, Federico
Publisher: name: Zenodo
Year: 2020
Subjects: Data management
Data management planning

description: Teaching material for DMP writing course
description: Trademarks, service marks, trade names, logos, icons, and domain names in this presentations are proprietary to their respective owner and are not subject of this license. Reuse of illustrations is indicated on the individual presentation slides.
ARR888713 Supplemental Material - Supplemental material for Tumor and nodal staging of colon cancer: accuracy of preoperative computed tomography at a Swedish high-volume center
Creators: name: Korsbakke, Kevin
name: Dahlbäck, Cecilia
name: Karlsson, Niklas
name: Zackrisson, Sophia
name: Buchwald, Pamela
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 110320 Radiology and Organ Imaging
subject: FOS: Clinical medicine

description: Supplemental material, ARR888713 Supplemental Material for Tumor and nodal staging of colon cancer: accuracy of preoperative computed tomography at a Swedish high-volume center by Kevin Korsbakke, Cecilia Dahlbäck, Niklas Karlsson, Sophia Zackrisson and Pamela Buchwald in Acta Radiologica Open
Supplementary_appendix – Supplemental material for Musculoskeletal pain as a predictor for depression in the general working population of Denmark
Creators: name: Hannerz, Harald
name: Holtermann, Andreas
name: Madsen, Ida Elisabeth Huitfeldt
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111799 Public Health and Health Services not elsewhere classified
subject: FOS: Health sciences

description: Supplemental material, Supplementary_appendix for Musculoskeletal pain as a predictor for depression in the general working population of Denmark by Harald Hannerz, Andreas Holtermann and Ida Elisabeth Huitfeldt Madsen in Scandinavian Journal of Public Health
Supplementary_Figure_2 – Supplemental material for Blood Pressure Changes in a Chinese Population Have a Greater Impact on Short-Term Outcomes Rather Than Long-Term Outcomes of Major Adverse Cardiovascular Events
Creators: name: Xu, Qianyi
name: Wang, Yali
name: Xie, Yanxia
name: Zheng, Jia
name: Guo, Rongrong
name: Dai, Yue
name: Sun, Zhaoqing
name: Xing, Liying
name: Zhang, Xingang
name: Ruan, Shikai
name: Zheng, Liqiang
name: Sun, Yingxian
Publisher: name: SAGE Journals
Year: 2020
Subjects: Public Health and Health Services not elsewhere classified

description: Supplemental material, Supplementary_Figure_2 for Blood Pressure Changes in a Chinese Population Have a Greater Impact on Short-Term Outcomes Rather Than Long-Term Outcomes of Major Adverse Cardiovascular Events by Qianyi Xu, Yali Wang, Yanxia Xie, Jia Zheng, Rongrong Guo, Yue Dai, Zhaoqing Sun, Liying Xing, Xingang Zhang, Shikai Ruan, Liqiang Zheng and Yingxian Sun in Asia Pacific Journal of Public Health
korbinib/DMP-writing-workshop: 2021_03_10_Aas
Creators: name: Fossum-Raunehaug, Solveig
name: Bösl, Korbinian
Publisher: name: Zenodo
Year: 2021
Subjects: Data management
Data management planning
DMP

description: DMP writing workshop, for Researchers in Aas, online 09.03.- 10.03.2021
description: Trademarks, service marks, trade names, logos, icons, and domain names in this presentations are proprietary to their respective owner and are not subject of this license. Reuse of illustrations is indicated on the individual presentation slides.
Detecting Homeomorphic 3-manifolds via Graph Neural Networks
Creators: name: Lawrie, Craig
name: Mansi, Lorenzo
Publisher: name: Deutsches Elektronen-Synchrotron, DESY, Hamburg
Year: 2024

description: Motivated by the enumeration of the BPS spectra of certain 3d $\mathcal{N}=2$ supersymmetric quantum field theories, obtained from the compactification of 6d superconformal field theories on three-manifolds, we study the homeomorphism problem for a class of graph-manifolds using Graph Neural Network techniques. Utilizing the JSJ decomposition, a unique representation via a plumbing graph is extracted from a graph-manifold. Homeomorphic graph-manifolds are related via a sequence of von Neumann moves on this graph; the algorithmic application of these moves can determine if two graphs correspond to homeomorphic graph-manifolds in super-polynomial time. However, by employing Graph Neural Networks (GNNs), the same problem can be addressed, at the cost of accuracy, in polynomial time. We build a dataset composed of pairs of plumbing graphs, together with a hidden label encoding whether the pair is homeomorphic. We train and benchmark a variety of network architectures within a supervised learning setting by testing different combinations of two convolutional layers (GEN, GCN, GAT, NNConv), followed by an aggregation layer and a classification layer. We discuss the strengths and weaknesses of the different GNNs for this homeomorphism problem.
Additional file 4 of The effect of higher or lower mean arterial pressure on kidney function after cardiac arrest: a post hoc analysis of the COMACARE and NEUROPROTECT trials
Creators: name: Laurikkala, Johanna
name: Ameloot, Koen
name: Reinikainen, Matti
name: Palmers, Pieter-Jan
name: De Deyne, Cathy
name: Bert, Ferdinande
name: Dupont, Matthias
name: Janssens, Stefan
name: Dens, Joseph
name: Hästbacka, Johanna
name: Jakkula, Pekka
name: Loisa, Pekka
name: Birkelund, Thomas
name: Wilkman, Erika
name: Vaara, Suvi T.
name: Skrifvars, Markus B.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Science Policy
subject: Computational Biology

description: Additional file 4: Figure S4. Creatinine and urine output (UO) in low-normal and high-normal mean arterial pressure target groups during the first five days after out-of-hospital cardiac arrest in patients without hypertension. A) Creatinine values of patients without hypertension; b) UO of patients without hypertension.
korbinib/DMP-writing-workshop: 2021_04_21_Bergen
Creators: name: Enerstvedt, Kjersti Hasle
name: Ostrop, Jenny
name: Linde, Tore Andre
name: Kallhovd, Siri
name: Janecke Helene Veim
name: Bösl, Korbinian
Publisher: name: Zenodo
Year: 2021
Subjects: Data management
Data management planning
DMP

description: DMP writing workshop, for Researchers in Bergen, online 21.04. - 22.04.2021
description: Trademarks, service marks, trade names, logos, icons, and domain names in this presentations are proprietary to their respective owner and are not subject of this license. Reuse of illustrations is indicated on the individual presentation slides.
10.117_0309364620954954_Supplemental_Material – Supplemental material for Affirming LGBTQ+ identities in orthotics and prosthetics education, practice, and research
Creators: name: Walker, Nicole R
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 110314 Orthopaedics
subject: FOS: Clinical medicine
subject: 110604 Sports Medicine
subject: FOS: Health sciences
subject: 110323 Surgery

description: Supplemental material, 10.117_0309364620954954_Supplemental_Material for Affirming LGBTQ+ identities in orthotics and prosthetics education, practice, and research by Nicole R Walker in Prosthetics and Orthotics International
Bridging the Gap Between Information Seeking and Product Search Systems: Q&A Recommendation for E-commerce
Creators: name: Kuzi, Saar
name: Malmasi, Shervin
Publisher: name: arXiv
Year: 2024
Subjects: subject: Computation and Language (cs.CL)
subject: Information Retrieval (cs.IR)
subject: FOS: Computer and information sciences

description: Consumers on a shopping mission often leverage both product search and information seeking systems, such as web search engines and Question Answering (QA) systems, in an iterative process to improve their understanding of available products and reach a purchase decision. While product search is useful for shoppers to find the actual products meeting their requirements in the catalog, information seeking systems can be utilized to answer any questions they may have to refine those requirements. The recent success of Large Language Models (LLMs) has opened up an opportunity to bridge the gap between the two tasks to help customers achieve their goals quickly and effectively by integrating conversational QA within product search. In this paper, we propose to recommend users Question-Answer (Q&A) pairs that are relevant to their product search and can help them make a purchase decision. We discuss the different aspects of the problem including the requirements and characteristics of the Q&A pairs, their generation, and the optimization of the Q&A recommendation task. We highlight the challenges, open problems, and suggested solutions to encourage future research in this emerging area.
korbinib/DMP-writing-workshop: 2021_06_16_online
Creators: name: Hjerde, Erik
name: Eide, Marta
name: Bösl, Korbinian
name: Ostrop, Jenny
name: Heggland, Ingrid
name: Fossum-Raunehaug, Solveig
name: Bochynska, Agata
name: Figenschou, Lars
Publisher: name: Zenodo
Year: 2021
Subjects: Data management
Data management planning
DMP

description: 2021-06-16 online workshop
description: Trademarks, service marks, trade names, logos, icons, and domain names in this presentations are proprietary to their respective owner and are not subject of this license. Reuse of illustrations is indicated on the individual presentation slides.
Complete Gravitational-Wave Spectrum of the Sun
Creators: name: Garcia Cely, Camilo
name: Ringwald, Andreas
Publisher: name: Deutsches Elektronen-Synchrotron, DESY, Hamburg
Year: 2024

description: The high-temperature plasma in the solar interior generates stochastic gravitational waves (GWs). Due to its significance as the primary source of high-frequency GWs in the solar system, we reexamine this phenomenon highlighting some physical processes, including the contribution of macroscopic hydrodynamic fluctuations. Our analysis builds upon several studies of axion emission from the Sun, particularly in relation to the treatment of plasma effects. Similar to many well-motivated Early Universe signals, we find that the resulting GW spectrum is several orders of magnitude below the current sensitivities of axion helioscopes such as (Baby)IAXO.
korbinib/DMP-writing-workshop: 2021_12_06_online
Creators: name: Bösl, Korbinian
name: Eide, Marta
name: Ostrop, Jenny
name: Heggland, Ingrid
name: Fossum-Raunehaug, Solveig
name: Bochynska, Agata
name: Vollan, Erik Axel
name: Figenschou, Lars
name: Bösl, Korbinian
Publisher: name: Zenodo
Year: 2021
Subjects: Data management
Data management planning
DMP

description: Slides from 2021-12-06/07 online workshop
description: Trademarks, service marks, trade names, logos, icons, and domain names in this presentations are proprietary to their respective owner and are not subject of this license. Reuse of illustrations is indicated on the individual presentation slides.
korbinib/DMP-writing-workshop: 2022-09-26
Creators: name: Eide, Marta
name: Bianchini, Federico
name: Åberg, Espen
name: Ostrop, Jenny
name: Gabrielsen, Ane Møller
name: Fossum-Raunehaug, Solveig
name: Kvale, Live Håndlykken
name: Vollan, Erik Axel
name: Figenschou, Lars
name: To, Thu-Hien
name: Fatima, Nazeefa
name: Bösl, Korbinian
Publisher: name: Zenodo
Year: 2022
Subjects: Data management
Data management planning
DMP

description: Slides from 2022-09-26/27 online workshop
description: Trademarks, service marks, trade names, logos, icons, and domain names in this presentations are proprietary to their respective owner and are not subject of this license. Reuse of illustrations is indicated on the individual presentation slides.
An Exceptional Cluster Algebra for Higgs plus Jet Production
Creators: name: Aliaj, Rigers
name: Papathanasiou, Georgios
Publisher: name: Deutsches Elektronen-Synchrotron, DESY, Hamburg
Year: 2024

description: A recent evaluation of three-loop nonplanar Feynman integrals contributing to Higgs plus jet production has established their dependence on two novel symbol letters. We show that the resulting alphabet is described by a $G_2$ cluster algebra, enlarging the $C_2$ cluster algebra found to cover all previously known integrals relevant for this process. The cluster algebra connection we find reveals new adjacency relations, which significantly reduce the function space dimension of the non-planar triple ladder integral. These adjacencies may be understood in part by embedding $G_2$ inside higher-rank cluster algebras.
Interview_guide_English – Supplemental material for Are family carers part of the care team providing end-of-life care? A qualitative interview study on the collaboration between family and professional carers
Creators: name: Vermorgen, Maarten
name: Vandenbogaerde, Isabel
name: Audenhove, Chantal Van
name: Hudson, Peter
name: Deliens, Luc
name: Cohen, Joachim
name: Vleminck, Aline De
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 110308 Geriatrics and Gerontology
subject: FOS: Clinical medicine
subject: 111702 Aged Health Care
subject: FOS: Health sciences

description: Supplemental material, Interview_guide_English for Are family carers part of the care team providing end-of-life care? A qualitative interview study on the collaboration between family and professional carers by Maarten Vermorgen, Isabel Vandenbogaerde, Chantal Van Audenhove, Peter Hudson, Luc Deliens, Joachim Cohen and Aline De Vleminck in Palliative Medicine
Additional file 5 of The effect of higher or lower mean arterial pressure on kidney function after cardiac arrest: a post hoc analysis of the COMACARE and NEUROPROTECT trials
Creators: name: Laurikkala, Johanna
name: Ameloot, Koen
name: Reinikainen, Matti
name: Palmers, Pieter-Jan
name: De Deyne, Cathy
name: Bert, Ferdinande
name: Dupont, Matthias
name: Janssens, Stefan
name: Dens, Joseph
name: Hästbacka, Johanna
name: Jakkula, Pekka
name: Loisa, Pekka
name: Birkelund, Thomas
name: Wilkman, Erika
name: Vaara, Suvi T.
name: Skrifvars, Markus B.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Science Policy
subject: Computational Biology

description: Additional file 5: Figure S5. Kidney function assessed with creatinine clearance (CKD-EPI) over time in the high-normal and low-normal MAP groups.
Additional file 6 of The effect of higher or lower mean arterial pressure on kidney function after cardiac arrest: a post hoc analysis of the COMACARE and NEUROPROTECT trials
Creators: name: Laurikkala, Johanna
name: Ameloot, Koen
name: Reinikainen, Matti
name: Palmers, Pieter-Jan
name: De Deyne, Cathy
name: Bert, Ferdinande
name: Dupont, Matthias
name: Janssens, Stefan
name: Dens, Joseph
name: Hästbacka, Johanna
name: Jakkula, Pekka
name: Loisa, Pekka
name: Birkelund, Thomas
name: Wilkman, Erika
name: Vaara, Suvi T.
name: Skrifvars, Markus B.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Science Policy
subject: Computational Biology

description: Additional file 6: Figure S6. Creatinine clearance (CKD-EPI) in low-normal and high-normal mean arterial pressure target groups during the first five days after out-of-hospital cardiac arrest in patients a) with hypertension; b) without hypertension.
Extension of a phase-field KKS model to predict the microstructure evolution in LPBF AlSi10Mg alloy submitted to non isothermal processes
Creators: name: Fetni, Seifallah
name: Delahaye, Jocelyn
name: Sepúlveda, Héctor
name: Duchêne, Laurent
name: Habraken, Anne Marie
name: Mertens, Anne
Publisher: name: arXiv
Year: 2024
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The out-of-equilibrium heterogeneous microstructure typical of AlSi10Mg processed by Laser Powder Bed Fusion (LPBF) is often modified by further heat treatment to improve its ductility. According to literature, extensive experimental investigations are generally required in order to optimize these heat treatments. In the present work, a phase-field approach is developed based on an extended Kim-Kim-Suzuki (KKS) model to guide and accelerate the post-treatment optimization. Combined with CALculation of PHAse Diagrams (CALPHAD) data, this extended KKS model predicts microstructural changes under anisothermal conditions. To ensure a more physical approach, it takes into account the enhanced diffusion by quenched-in excess vacancies as well as the elastic energy due to matrix/precipitate lattice mismatch. As the developed model includes the computation of the evolution of the thermo-physical properties, its results are validated through comparison with experimental DSC curves measured during the non-isothermal loading of as-built LPBF AlSi10Mg. The computed microstructure evolution reproduces the microstructural observation and successfully explains the peaks in the DSC heat flow curve. It thus elucidates the detailed microstructural evolution inside the eutectic silicon phase by considering the growth and coalescence of silicon precipitates and the matrix desaturation.
Additional file 7 of The effect of higher or lower mean arterial pressure on kidney function after cardiac arrest: a post hoc analysis of the COMACARE and NEUROPROTECT trials
Creators: name: Laurikkala, Johanna
name: Ameloot, Koen
name: Reinikainen, Matti
name: Palmers, Pieter-Jan
name: De Deyne, Cathy
name: Bert, Ferdinande
name: Dupont, Matthias
name: Janssens, Stefan
name: Dens, Joseph
name: Hästbacka, Johanna
name: Jakkula, Pekka
name: Loisa, Pekka
name: Birkelund, Thomas
name: Wilkman, Erika
name: Vaara, Suvi T.
name: Skrifvars, Markus B.
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Science Policy
subject: Computational Biology

description: Additional file 7: Table S1. Inclusion and exclusion criteria of the COMACARE and NEUROPROTECT trials.