cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Co-translational assembly orchestrates competing biogenesis pathways.
Creators: name: Seidel, Maximilian
name: Becker, Anja
name: Pereira, Filipa
name: Landry, Jonathan JM
name: De Azevedo, Nayara Trevisan Doimo
name: Fusco, Claudia M
name: Kaindl, Eva
name: Romanov, Natalie
name: Baumbach, Janina
name: Langer, Julian D
name: Schuman, Erin M
name: Patil, Kiran Raosaheb
name: Hummer, Gerhard
name: Benes, Vladimir
name: Beck, Martin
Publisher: name: Apollo - University of Cambridge Repository
Year: 2022
Subjects: Article
/631/45/500
/631/1647/514/1949
/631/80/389/2029
/631/337/574
/38/91
/38/88
/38/90
/82/58
article

description: Funder: Max-Planck-Gesellschaft (Max Planck Society); doi: https://doi.org/10.13039/501100004189
description: During the co-translational assembly of protein complexes, a fully synthesized subunit engages with the nascent chain of a newly synthesized interaction partner. Such events are thought to contribute to productive assembly, but their exact physiological relevance remains underexplored. Here, we examine structural motifs contained in nucleoporins for their potential to facilitate co-translational assembly. We experimentally test candidate structural motifs and identify several previously unknown co-translational interactions. We demonstrate by selective ribosome profiling that domain invasion motifs of beta-propellers, coiled-coils, and short linear motifs may act as co-translational assembly domains. Such motifs are often contained in proteins that are members of multiple complexes (moonlighters) and engage with closely related paralogs. Surprisingly, moonlighters and paralogs assemble co-translationally in only some but not all of the relevant biogenesis pathways. Our results highlight the regulatory complexity of assembly pathways.
Charybdis (Charybdis) hellerii
Creators: name: Yokes, Baki
name: Galil, Bella S.
Publisher: name: Zenodo
Year: 2006
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Decapoda
Portunidae
Charybdis
Charybdis hellerii

description: Charybdis (Charybdis) hellerii (A. Milne-Edwards, 1867)
(Fig. 2F)
MATERIAL PHOTOGRAPHED. — Tekirova, 7 m depth, rocky bottom, night dive, VIII.2001.
REMARKS
 Charybdis hellerii is easily differentiated from the congeneric Erythrean invasive C. longicollis Leene, 1938 in its prominently cut teeth on frontal margin of carapace, large spines on anterior margin of cheliped merus, and chela bearing four spines on superior surface, and a single spine near the carpal articulation. A westward extension of its range, as it was reported before only from southeastern Turkey (Kocataş 1981). The species is quite common off Tekirova.
description: Published as part of Yokes, Baki & Galil, Bella S., 2006, New records of alien decapods (Crustacea) from the Mediterranean coast of Turkey, with a description of a new palaemonid species, pp. 747-755 in Zoosystema 28 (3) on page 754, DOI: 10.5281/zenodo.5393594
Cymindis discophora CHAUDOIR 1873
Creators: name: Wrase, DW
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Carabidae
Cymindis
Cymindis discophora

description: Cymindis (s.str.) discophora CHAUDOIR 1873
P o r t u g a l: Madeira: Ilhas Desertas, Deserta Grande, Chão da Doca, 400 m, 1.VIII. 2000, Chr. Bayer leg. (11 spcms., cWR).
Distributed in N-Africa (Morocco to Tunisia) and the Canary Islands (MACHADO 1992: 488, CATPAL 1: KABAK 2003: 412). New record for Portugal (Madeira).
description: Published as part of Wrase, DW, 2009, New or interesting records of Carabid beetles from Europe, Madeira, northern Africa, Turkey, from the Near East, Iran, Iraq, Kuwait, and Pakistan, with nomenclatorial and taxonomic notes (Coleoptera, Carabidae, Bembidiini, Brachinini, Cyclosomini, Elaphrini, Harpalini, Lebiini, Nebriini, Platynini,, pp. 901-935 in Linzer biologische Beiträge 41 (1) on page 921, DOI: 10.5281/zenodo.5276330
The discriminating power of wavelets to detect non-Gaussianity in the CMB
Creators: name: Barreiro, R. B.
name: Hobson, M. P.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We investigate the power of wavelet techniques in detecting non-Gaussianity in the cosmic microwave background (CMB). We use the method to discriminate between an inflationary and a cosmic strings model using small simulated patches of the sky. We show the importance of the choice of a good test statistic in order to optimise the discriminating power of the wavelet technique. In particular, we construct the Fisher discriminant function, which combines all the information available in the different wavelet scales. We also compare the performance of different decomposition schemes and wavelet bases. For our case, we find that the Mallat and {\it à trous} algorithms are superior to the 2D-tensor wavelets. Using this technique, the inflationary and strings models are clearly distinguished even in the presence of a superposed Gaussian component with twice the rms amplitude of the original cosmic string map.
description: 15 pages, 10 figures, submitted to MNRAS
Additional file 2: of Economic burden of antibiotic resistance in ESKAPE organisms: a systematic review
Creators: name: Xuemei Zhen
name: Lundborg, Cecilia
name: Xueshan Sun
name: Xiaoqian Hu
name: Hengjin Dong
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: Study Quality Assessment. Table S9. Quality assessment checklist for nonrandomized studies. Table S10. Study quality of the included study. (DOCX 120 kb)
Evaluations of some determinants of matrices related to the Pascal triangle
Creators: name: Krattenthaler, Christian
Publisher: name: arXiv
Year: 2001
Subjects: subject: Combinatorics (math.CO)
subject: Number Theory (math.NT)
subject: Rings and Algebras (math.RA)
subject: FOS: Mathematics
subject: 05A19 (Primary) 05A10 11C20 15A15 33C45 (Secondary)

description: We prove several evaluations of determinants of matrices, the entries of which are given by the recurrence $a_{i,j}=a_{i-1,j}+a_{i,j-1}$, or variations thereof. These evaluations were either conjectured or extend conjectures by Roland Bacher [J. Théorie Nombres Bordeaux 13 (2001), to appear; see http://arxiv.org/abs/math.CO/0109013].
description: 19 pages, AmS-TeX
Additional file 3: of Economic burden of antibiotic resistance in ESKAPE organisms: a systematic review
Creators: name: Xuemei Zhen
name: Lundborg, Cecilia
name: Xueshan Sun
name: Xiaoqian Hu
name: Hengjin Dong
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Table S1. Studies characteristics associated with resistant and multi-drug resistant Staphylococcus aureus. Table S2. Studies characteristics associated with resistant and multi-drug resistant Enterococcus. Table S3. Studies characteristics associated with resistant and multi-drug resistant E.coli and Klebsiella spp./ K. pneumoniae. Table S4. Studies characteristics associated with resistant and multi-drug resistant E. coli. Table S5. Studies characteristics associated with resistant and multi-drug resistant K. pneumoniae. Table S6. Studies characteristics associated with resistant and multi-drug resistant P. aeruginosa. Table S7. Studies characteristics associated with resistant and multi-drug resistant A. baumannii. Table S8. Studies describing hospital costs among patients with resistant or multi-drug resistant ESKAPE organisms according to different organisms and types of infection. (DOCX 143 kb)
External childcare and socio-behavioral development in Switzerland: Long-term relations from childhood into young adulthood.
Creators: name: Averdijk, Margit
name: Ribeaud, Denis
name: Eisner, Manuel
Publisher: name: Apollo - University of Cambridge Repository
Year: 2022
Subjects: subject: Research Article
subject: Biology and life sciences
subject: Social sciences
subject: FOS: Social sciences
subject: People and places
subject: Medicine and health sciences

description: Funder: Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; funder-id: http://dx.doi.org/10.13039/501100001711
description: Funder: Jacobs Foundation; funder-id: http://dx.doi.org/10.13039/501100003986
description: Funder: Swiss Federal Office of Public Health
description: Funder: Canton of Zurich Ministry of Education
description: Funder: Julius Baer Foundation
description: This study examined early external childcare in relation to development from age 7 to 20. A Swiss sample was used (N = 1,225; 52% male). Development included multi-informant-reported externalizing behavior, internalizing problems, prosocial behavior, delinquency, and substance use. Growth curve models revealed that, dependent on the informant, time in a daycare center was related to increased externalizing and internalizing problems until at least age 11. It was not related to delinquency. Roughly three days per week at a daycare mother or playgroup was related to increased externalizing behavior. External family care was associated with increased prosocial behavior. Finally, time in a daycare center was associated with fewer externalizing but more internalizing problems and substance use for children from vulnerable backgrounds. This relation with substance use lasted to age 20.
Atergatis roseus
Creators: name: Yokes, Baki
name: Galil, Bella S.
Publisher: name: Zenodo
Year: 2006
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Decapoda
Xanthidae
Atergatis
Atergatis roseus

description: Atergatis roseus (Rüppell, 1830)
 MATERIAL PHOTOGRAPHED. — Turkey. Konyaalti, 3-4 m depth, X.2001. — Üç Adalar, 2002.
REMARKS
 Atergatis roseus is distinguished from the Mediterranean xanthid species in its transversely oval, punctate carapace, with nearly entire, crested anterolateral margins. The carapace is a bright reddish-brown, and in younger specimens, it is rimmed with white. This record constitutes a westward extension of its range, as it was reported before only from southeastern Turkey (Enzenross et al. 1990).
description: Published as part of Yokes, Baki & Galil, Bella S., 2006, New records of alien decapods (Crustacea) from the Mediterranean coast of Turkey, with a description of a new palaemonid species, pp. 747-755 in Zoosystema 28 (3) on page 754, DOI: 10.5281/zenodo.5393594
Additional file 1 of Neurodevelopmental outcomes following possible serious bacterial infection in early infancy in Karachi, Pakistan: a prospective cohort study
Creators: name: Farheen, Nudrat
name: Shahid, Shahira
name: Lalani, Kiran Ramzan Ali
name: Azam, Iqbal
name: Khalid, Farah
name: Fatima, Batool
name: Islam, Mohammad Shahidul
name: Saha, Samir K.
name: Qazi, Shamim Ahmad
name: Jehan, Fyezah
name: Nisar, Muhammad Imran
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Mental Health
subject: Infectious Diseases
subject: FOS: Health sciences

description: Supplementary Material 1.
Understanding the long-term spectral variability of Cygnus X-1 with BATSE and ASM observations
Creators: name: Zdziarski, Andrzej A.
name: Poutanen, Juri
name: Paciesas, William S.
name: Wen, Linqing
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present an analysis of all observations of Cygnus X-1 by the BATSE (20-300 keV) and by ASM (1.5-12 keV) until 2002 June, including 1200 days of simultaneous data. We find a number of correlations between fluxes and hardnesses in different energy bands. In the hard state, the variability can be explained by softening the overall spectrum with a pivot at 50 keV and another, independent variability pattern where the spectral shape does not change when the luminosity changes. In the soft state, the variability is caused by a variable hard tail of a constant shape superimposed on a constant soft component. These variability patterns are in agreement with the energy-dependent rms variability in the two states. We also study in detail recent soft states in 2000-02. The last of them has lasted so far for >200 days. Their spectra are harder in the 1.5-5 keV band but similar or in the 3-12 keV band than those of the 1996 soft state whereas the rms variability is stronger in all the ASM bands. On the other hand, the 1994 soft state transition observed by BATSE appears very similar to the 1996 one. We interpret the variability patterns by theoretical Comptonization models. In the hard state, the variability appears to be driven mostly by changing flux in seed photons Comptonized in a hot thermal plasma cloud with an approximately constant power supply. In the soft state, the variability is consistent with flares of hybrid, thermal/nonthermal, plasma with variable power above a stable cold disk. The spectral and timing differences between the 1996 and 2000-02 soft states are explained by a decrease of the color disk temperature. Also, based on broad-band pointed observations, we find the intrinsic bolometric luminosity increases by a factor of 3-4 from the hard state to the soft one.
description: ApJ, in press (the final version after referee's comments), 26 pages, needs to be printed in color
Toward the spectrum of the SU(2) adjoint Higgs model
Creators: name: Afferrante, Vincenzo
name: Maas, Axel
name: Törek, Pascal
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: Scalar particles in the adjoint representation of a non-Abelian gauge theory play an important role in many scenarios beyond the standard model, especially of GUT type. For such theories manifestly gauge-invariant, massless, composite vector particles have been predicted, even at weak coupling, using the Fröhlich-Morchio-Strocchi mechanism. We use lattice gauge theory to investigate the simplest such theories, a single adjoint scalar coupled to an SU(2) Yang-Mills theory. The results support the existence of such a particle, in accordance with the prediction.
description: 4 pages, 1 figure; proceedings to conference ALPS2019
Targeted evolution of pinning landscapes for large superconducting critical currents
Creators: name: Sadovskyy, Ivan A.
name: Koshelev, Alexei E.
name: Kwok, Wai-Kwong
name: Welp, Ulrich
name: Glatz, Andreas
Publisher: name: arXiv
Year: 2019
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Materials Science (cond-mat.mtrl-sci)
subject: Applied Physics (physics.app-ph)
subject: FOS: Physical sciences

description: The ability of type-II superconductors to carry large amounts of current at high magnetic fields is a key requirement for future design innovations in high-field magnets for accelerators and compact fusion reactors and largely depends on the vortex pinning landscape comprised of material defects. The complex interaction of vortices with defects that can be grown chemically, e.g., self-assembled nanoparticles and nanorods, or introduced by post-synthesis particle irradiation precludes a priori prediction of the critical current and can result in highly non-trivial effects on the critical current. Here, we borrow concepts from biological evolution to create a genetic algorithm evolving pinning landscapes to accommodate vortex pinning and determine the best possible configuration of inclusions for two different scenarios: an evolution process starting from a pristine system and one with pre-existing defects to demonstrate the potential for a post-processing approach to enhance critical currents. Furthermore, the presented approach is even more general and can be adapted to address various other targeted material optimization problems.
description: 15 pages, 12 figures
Dromius agilis
Creators: name: Wrase, DW
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Carabidae
Dromius
Dromius agilis

description: Dromius (s.str.) agilis (FABRICIUS 1787)
T u r k e y: Bolu: Abant Gölü, 30 km W Bolu, 4.V.1997, J. Bašta leg. (433, 2♀♀, cBAS, cWR). - Isparta: Kurucuova, Dipoyraz Dağı, 4.-7.VII.1997, J. Mertlík leg. (13, cWR).
Widely distributed from W-Europe to W-Asia, not cited from Turkey in CASALE & VIGNA TAGLIANTI 1999 and in CATPAL 1 (KABAK 2003: 420). First records for Turkey.
description: Published as part of Wrase, DW, 2009, New or interesting records of Carabid beetles from Europe, Madeira, northern Africa, Turkey, from the Near East, Iran, Iraq, Kuwait, and Pakistan, with nomenclatorial and taxonomic notes (Coleoptera, Carabidae, Bembidiini, Brachinini, Cyclosomini, Elaphrini, Harpalini, Lebiini, Nebriini, Platynini,, pp. 901-935 in Linzer biologische Beiträge 41 (1) on page 922, DOI: 10.5281/zenodo.5276330
Amateur Observers Witness the Return of Venus' Cloud Discontinuity
Creators: name: E., Kardasis
name: J., Peralta
name: G., Maravelias
name: M., Imai
name: A., Wesley
name: T., Olivetti
name: Y., Naryzhniy
name: L., Morrone
name: A., Gallardo
name: G., Calapai
name: J., Camarena
name: P., Casquinha
name: D., Kananovich
name: N., MacNeill
name: C., Viladrich
name: A, Takoudi
Publisher: name: arXiv
Year: 2022
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: Atmospheric and Oceanic Physics (physics.ao-ph)
subject: FOS: Physical sciences

description: Firstly identified in images from JAXA's orbiter Akatsuki, the cloud discontinuity of Venus is a planetary-scale phenomenon known to be recurrent since, at least, the 1980s. Interpreted as a new type of Kelvin wave, this disruption is associated to dramatic changes in the clouds' opacity and distribution of aerosols, and it may constitute a critical piece for our understanding of the thermal balance and atmospheric circulation of Venus. Here, we report its reappearance on the dayside middle clouds four years after its last detection with Akatsuki/IR1, and for the first time, we characterize its main properties using exclusively near-infrared images from amateur observations. In agreement with previous reports, the discontinuity exhibited temporal variations in its zonal speed, orientation, length, and its effect over the clouds' albedo during the 2019/2020 eastern elongation. Finally, a comparison with simultaneous observations by Akatsuki UVI and LIR confirmed that the discontinuity is not visible on the upper clouds' albedo or thermal emission, while zonal speeds are slower than winds at the clouds' top and faster than at the middle clouds, evidencing that this Kelvin wave might be transporting momentum up to upper clouds.
description: 19 pages, 6 figures, 2 tables
The First Detection of Cobalt in a Damped Lyman Alpha System
Creators: name: Ellison, Sara L.
name: Ryan, Sean G.
name: Prochaska, Jason X.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present the first ever detection of Cobalt in a Damped Lyman Alpha system (DLA) at z = 1.92. In addition to providing important clues to the star formation history of these high redshift galaxies, we discuss how studying the Co abundance in DLAs may also help to constrain models of stellar nucleosynthesis in a regime not probed by Galactic stars.
description: 4 pages, to appear in the proceedings of `New Quests in Stellar Astrophysics: The Link Between Stars and Cosmology', eds. M. Chavez, A. Bressan, A. Buzzoni, D. Mayya
Additional file 1: of Economic burden of antibiotic resistance in ESKAPE organisms: a systematic review
Creators: name: Xuemei Zhen
name: Lundborg, Cecilia
name: Xueshan Sun
name: Xiaoqian Hu
name: Hengjin Dong
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Search terms and search strategies. (DOCX 16 kb)
Explicit and efficient formulas for the lattice point count in rational polygons using Dedekind-Rademacher sums
Creators: name: Beck, Matthias
name: Robins, Sinai
Publisher: name: arXiv
Year: 2001
Subjects: subject: Combinatorics (math.CO)
subject: Number Theory (math.NT)
subject: FOS: Mathematics
subject: 05A15, 52C05, 11H06, 11L03

description: We give explicit, polynomial-time computable formulas for the number of integer points in any two-dimensional rational polygon. A rational polygon is one whose vertices have rational coordinates. We find that the basic building blocks of our formulas are Dedekind-Rademacher sums, which are polynomial-time computable finite Fourier series. As a by-product we rederive a reciprocity law for these sums due to Gessel, which generalizes the reciprocity law for the classical Dedekind sums. In addition, our approach shows that Gessel's reciprocity law is a special case of the one for Dedekind-Rademacher sums, due to Rademacher.
description: 16 pages, updated journal reference
Additional file 2 of The impact of neck pain on gait health: a systematic review and meta-analysis
Creators: name: Burton, Wren
name: Ma, Yan
name: Manor, Brad
name: Hausdorff, Jeffrey M.
name: Kowalski, Matthew H.
name: Bain, Paul A.
name: Wayne, Peter M.
Publisher: name: figshare
Year: 2023
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Science Policy

description: Additional file 2: Supplementary Table. Databases and search terms used included in electronic literature search.
Polymastia Bowerbank 1864
Creators: name: Plotkin, Alexander
name: Boury-Esnault, Nicole
Publisher: name: Zenodo
Year: 2004
Subjects: Biodiversity
Taxonomy
Animalia
Porifera
Demospongiae
Polymastiida
Polymastiidae
Polymastia

description: Genus Polymastia Bowerbank, 1864
 Polymastia Bowerbank, 1864: 177.
 Penicillaria Gray, 1867: 527.
 Rinalda Schmidt, 1870: 51.
 TYPE SPECIES. — Spongia mamillaris Müller, 1806: 44 (by monotypy).
DIAGNOSIS (from Boury-Esnault 2002). — Polymastiidae, thickly encrusting, spherical or cushionshaped, always with papillae. Choanosomal skeleton composed of radial tracts of principal spicules between which free spicules are scattered. Ectosomal skeleton composed of at least two layers, the superficial one is a palisade of small tylostyles, the lower layer is made of intermediary spicules, tangential to the surface. The principal spicules can be tylostyles, subtylostyles, styles or strongyloxeas, intermediary spicules are most often tylostyles, and ectosomal spicules are always tylostyles.
description: Published as part of Plotkin, Alexander & Boury-Esnault, Nicole, 2004, Alleged cosmopolitanism in sponges: the example of a common Arctic Polymastia (Porifera, Demospongiae, Hadromerida), pp. 13-20 in Zoosystema 26 (1) on page 15, DOI: 10.5281/zenodo.5393690
Strong ergodicity breaking in aging of mean field spin glasses
Creators: name: Bernaschi, Massimo
name: Billoire, Alain
name: Maiorano, Andrea
name: Parisi, Giorgio
name: Ricci-Tersenghi, Federico
Publisher: name: arXiv
Year: 2019
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: Out of equilibrium relaxation processes show aging if they become slower as time passes. Aging processes are ubiquitous and play a fundamental role in the physics of glasses and spin glasses and in other applications (e.g. in algorithms minimizing complex cost/loss functions). The theory of aging in the out of equilibrium dynamics of mean-field spin glass models has achieved a fundamental role, thanks to the asymptotic analytic solution found by Cugliandolo and Kurchan. However this solution is based on assumptions (e.g. the weak ergodicity breaking hypothesis) which have never been put under a strong test until now. In the present work we present the results of an extraordinary large set of numerical simulations of the prototypical mean-field spin glass models, namely the Sherrington-Kirkpatrick and the Viana-Bray models. Thanks to a very intensive use of GPUs, we have been able to run the latter model for more than $2^{64}$ spin updates and thus safely extrapolate the numerical data both in the thermodynamical limit and in the large times limit. The measurements of the two-times correlation functions in isothermal aging after a quench from a random initial configuration to a temperature $T
description: 6 pages (Main text) + 6 pages (Supplementary Information). Submitted to PNAS
Microlestes coiffaiti Mateu 1956
Creators: name: Wrase, DW
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Carabidae
Microlestes
Microlestes coiffaiti

description: Microlestes coiffaiti MATEU 1956
I s r a e l: North District: Upper Galilee, area W Ya’ar Bar’am Reserve, ca. 700 m (stony semi-open grassland, limestone), 30.IV.2006, Wrase leg. [20] (9 spcms., cWR). Upper Galilee, Ha Khula Valley, Ma’agar Einan lake, 73 m, 33°05.137’N / 035°34.730’E (toe of dam, in moist, loamy soil), 1./ 2.V.2006, Wrase leg. [23] (1 spcm., cWR); the same but: shore, gravel, sandy/loamy soil (1 spcm., cWR). Upper Galilee, S Ziv’on, 750 m, 33°01.189’N / 035°24.914’E (open stony grazing land, dolomite), 8.III.2008, Wrase leg. [1] (5 spcms., cWR, male genital investigated!).
Described from Lebanon, and up to now not recorded outside this country (CATPAL 1: KABAK 2003: 423) but the occurrence in Israel was expected. First record for Israel.
description: Published as part of Wrase, DW, 2009, New or interesting records of Carabid beetles from Europe, Madeira, northern Africa, Turkey, from the Near East, Iran, Iraq, Kuwait, and Pakistan, with nomenclatorial and taxonomic notes (Coleoptera, Carabidae, Bembidiini, Brachinini, Cyclosomini, Elaphrini, Harpalini, Lebiini, Nebriini, Platynini,, pp. 901-935 in Linzer biologische Beiträge 41 (1) on page 922, DOI: 10.5281/zenodo.5276330
A test of general relativity from the three-dimensional orbital geometry of a binary pulsar
Creators: name: van Straten, W.
name: Bailes, M.
name: Britton, M. C.
name: Kulkarni, S. R.
name: Anderson, S. B.
name: Manchester, R. N.
name: Sarkissian, J.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Binary pulsars provide an excellent system for testing general relativity because of their intrinsic rotational stability and the precision with which radio observations can be used to determine their orbital dynamics. Measurements of the rate of orbital decay of two pulsars have been shown to be consistent with the emission of gravitational waves as predicted by general relativity, providing the most convincing evidence for the self-consistency of the theory to date. However, independent verification of the orbital geometry in these systems was not possible. Such verification may be obtained by determining the orientation of a binary pulsar system using only classical geometric constraints, permitting an independent prediction of general relativistic effects. Here we report high-precision timing of the nearby binary millisecond pulsar PSR J0437-4715, which establish the three-dimensional structure of its orbit. We see the expected retardation of the pulse signal arising from the curvature of space-time in the vicinity of the companion object (the `Shapiro delay'), and we determine the mass of the pulsar and its white dwarf companion. Such mass determinations contribute to our understanding of the origin and evolution of neutron stars.
description: 5 pages, 2 figures
MOESM1 of Kinetics of MSC-based enzyme therapy for immunoregulation
Creators: name: Burr, Alexandra
name: Biju Parekkadan
Publisher: name: figshare
Year: 2019
Subjects: subject: Biophysics
subject: Biochemistry
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Hematology

description: Additional file 1: Figure S1. MSCs convert ATP to Adenosine which can be inhibited by POM-1. (A) For MSCs dosed with 1 mM ATP (500 nmol), adenosine production increases with time. Hydrolyzed ATP and adenosine production were measured at each timepoint to show that 95% of ATP hydrolyzed by cells is converted to adenosine. The maximum amount of ATP hydrolysis predicted by models at this density is 120 nmol (when operating at Vmax) and experimentally we find 118 nmol is hydrolyzed and 112 nmol is converted to adenosine. (B) To inhibit CD39 activity, MSCs were treated for 20 min with 100 µM of POM-1 inhibitor and no measurable adenosine was recorded until 2 h after ATP treatment and remains significantly less than untreated groups. Figure S2. Fibroblast cells hydrolysis of ATP. (A) Expression of ectoenzymes CD73 and CD39 is similar to that of MSCs with normal dermal fibroblasts and pancreatic cancer-associated fibroblasts. CD73 is high expressed, while CD39 is weakly expressed. (B) When exposed to 64 nmol of ATP, both fibroblasts cell types can hydrolyze the ATP completely within 2 h.
Microlestes vittatus subsp. vittatus ssp. vittatus (MOTSCHULSKY 1859
Creators: name: Wrase, DW
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Carabidae
Microlestes
Microlestes vittatus
Microlestes vittatus ssp. vittatus motschulsky 1859

description: Microlestes vittatus ssp. vittatus MOTSCHULSKY 1859
I r a n: Hormozgan: Genū, 30 km N Bandar-e ‘Abbās, 23.IV.2002, P. Kabátek leg. (13, cWR).
Distributed in N-Africa (Algeria, Tunisia, Egypt), Israel, Iraq, Saudi Arabia, and Pakistan (CATPAL 1: KABAK 2003: 424). First record for Iran.
description: Published as part of Wrase, DW, 2009, New or interesting records of Carabid beetles from Europe, Madeira, northern Africa, Turkey, from the Near East, Iran, Iraq, Kuwait, and Pakistan, with nomenclatorial and taxonomic notes (Coleoptera, Carabidae, Bembidiini, Brachinini, Cyclosomini, Elaphrini, Harpalini, Lebiini, Nebriini, Platynini,, pp. 901-935 in Linzer biologische Beiträge 41 (1) on page 922, DOI: 10.5281/zenodo.5276330
What regulates the velocity distribution of interstellar clouds?
Creators: name: Ricotti, Massimo
name: Ferrara, Andrea
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Kinetic energy stored in ISM bulk/turbulent motions is a crucial ingredient to properly describe most properties of observed galaxies. By using Monte Carlo simulations, we investigate how this energy is injected by supernovae and dissipated via cloud collisions and derive the corresponding ISM velocity probability distribution function (PDF). The functional form of the PDF for the modulus of the velocity dispersion is $$p(v) \propto v^2 \exp[-(v/σ)^β].$$ The power-law index of the PDF depends only on the value of the average cloud collision elasticity < ε> as β= 2\exp( -1). If βand the gas velocity dispersion σare known, the specific kinetic energy dissipated by collisions is found to be \propto σ^2 \ln (2 / β)/(β-0.947); in steady state, this is equal to the energy input from SNe. We predict that in a multiphase, low metallicity (Z \approx 5 \times 10^{-3} Z_\odot) ISM the PDF should be close to a Maxwellian (β= 2) with velocity dispersion σ\simgt 11$ km s\m; in more metal rich systems (Z \simgt 5 \times 10^{-2} Z_\odot), instead, we expect to observe almost exponential PDFs. This is in good agreement with a number of observations that we review and might explain the different star formation modes seen in dwarfs and spiral galaxies.
description: Accepted for publication of MNRAS. 10 pages including 7 figures
Lebia (Lamprias) rutilicollis REITTER 1915
Creators: name: Wrase, DW
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Carabidae
Lebia
Lebia rutilicollis

description: Lebia (Lamprias) rutilicollis REITTER 1915
I s r a e l: Haifa: Nahal Oren, Mt. Carmel, 24.VI.1997, Pavliček & Chikatunov leg. (1 spcm., TAU). - North district: Hagalil (Galilee), Rama, E Karmiel, 2.II.2004, Th. Assmann leg. (1 3, cASSM).
L e b a n o n:SouthGovernorate(al-Janoub): Tyre: 12 km NW Enn Nâqoura, ca 50 m (hilly country near sea, scrubland), 25.XII. 2001, Chr. Reuter leg. (13, cWR).
 The species was described, based on two specimens, from " Syrien:...Haifa,....Saida" but was only cited as only occurring in Syria in CATPAL 1: KABAK 2003: 428). Above mentioned specimen from Nahal Oren, Mt. Carmel, was unidentified but obviously it is coming from the material collected for the "Evolution Canyon" project, made at that place for investigating the processes of biodiversity evolution at a microsite. A checklist of a part of beetle families, collected during this study, was published (CHIKATUNOV et al. 1999), and in this paper a " Lebia ruficollis Reitter 1915 " was recorded but undoubtly the name refers to Lebia rutilicollis REITT. For this species occurrence at Mt. Hermon and Mt. Carmel was mentioned, and the range, beside Israel, was given with Syria and Lebanon. An occurrence at Mt. Hermon, however, seems somewhat implausible due to the great climatic differences between the areas both massifs are situated. Further investigations must elucidate the real range of the species. Above findings also indicate preference for mild, sea-influenced climate. Seemingly first detailed record for Lebanon.
description: Published as part of Wrase, DW, 2009, New or interesting records of Carabid beetles from Europe, Madeira, northern Africa, Turkey, from the Near East, Iran, Iraq, Kuwait, and Pakistan, with nomenclatorial and taxonomic notes (Coleoptera, Carabidae, Bembidiini, Brachinini, Cyclosomini, Elaphrini, Harpalini, Lebiini, Nebriini, Platynini,, pp. 901-935 in Linzer biologische Beiträge 41 (1) on pages 922-923, DOI: 10.5281/zenodo.5276330
Risk factors for complicated grief among family members bereaved in intensive care unit settings: A systematic review.
Creators: name: Sanderson, Emma AM
name: Humphreys, Sally
name: Walker, Fiona
name: Harris, Daniel
name: Carduff, Emma
name: McPeake, Joanne
name: Boyd, Kirsty
name: Pattison, Natalie
name: Lone, Nazir I
Publisher: name: Apollo - University of Cambridge Repository
Year: 2022
Subjects: subject: Research Article
subject: Medicine and health sciences
subject: Research and analysis methods
subject: Biology and life sciences
subject: Social sciences
subject: FOS: Social sciences

description: BACKGROUND: Families of intensive care unit (ICU) decedents are at increased risk of experiencing complicated grief. However, factors associated with complicated grief in ICU and bereavement needs assessment are not available routinely. We aimed to conduct a systematic review identifying risk factors associated with complicated grief among family members of ICU decedents. MATERIALS AND METHODS: MEDLINE, EMBASE, CINAHL, PsycINFO, the Cochrane Library and Web of Science were searched to identify relevant articles. Observational studies and randomised and non-randomised controlled trials were included. Studies were screened and quality appraised in duplicate. Risk of bias was assessed using Newcastle-Ottawa Scale. A narrative synthesis was undertaken. RESULTS: Seven studies conducted across three continents were eligible. Four studies were of high quality. 61 risk factors were investigated across the studies. Factors associated with a decreased risk of complicated grief included age, patient declining treatment and involvement in decision-making. Factors associated with increased risk included living alone, partner, dying while intubated, problematic communication, and not having the opportunity to say goodbye. CONCLUSION: This systematic review has identified risk factors which may help identify family members at increased risk of complicated grief. Many of the studies has small sample sizes increasing the risk of erroneously reporting no effect due to type II error. Some factors are specific to the ICU setting and are potentially modifiable. Bereavement services tailored to the needs of bereaved family members in ICU settings are required. (PROSPERO registration ID 209503).
Additional file 3: of Inequities in breast cancer treatment in sub-Saharan Africa: findings from a prospective multi-country observational study
Creators: name: Foerster, Milena
name: Anderson, Benjamin
name: McKenzie, Fiona
name: Galukande, Moses
name: Anele, Angelica
name: Adisa, Charles
name: Annelle Zietsman
name: Schuz, Joachim
name: Silva, Isabel Santos
name: McCormack, Valerie
Publisher: name: figshare
Year: 2019
Subjects: subject: Cell Biology
subject: Biotechnology
subject: Cancer
subject: Science Policy
subject: Plant Biology
subject: FOS: Biological sciences

description: Figure S1. shows the proportion of breast cancer patients whose cancer treatment had not been initiated within 12â months of diagnosis, by selected socio-demographic factors and settings. (PDF 392 kb)
Additional file 1 of Genetic mapping and genomic selection for maize stalk strength
Creators: name: Liu, Xiaogang
name: Hu, Xiaojiao
name: Li, Kun
name: Liu, Zhifang
name: Wu, Yujin
name: Wang, Hongwu
name: Huang, Changling
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1 : Table S1. Analysis of variance (ANOVA) and broad-sense heritability for rind penetrometer resistance of various stages across environments in two RIL populations. Table S2. Summary of the bin map of LR population (Zheng58 × HD568). Table S3. Summary of the bins that were greater than 10.0 Mb in length in LR population (Zheng58 × HD568). Table S4. Summary of the high-density genetic map derived from two RIL populations. Table S5. QTL for rind penetrometer resistance in high-oil population (B73 × BY804). Table S6. QTL for rind penetrometer resistance in lodging-resistance population (Zheng58 × HD568). Table S7. Candidate genes annotation. Table S8. Comparison of prediction accuracies between models. Table S9. Proportion of variance components estimated by UV, FIXED and ME models. Table S10. Proportion of variance components estimated by UV and MS models. Figure S1. Phenotypic correlation of rind penetrometer resistance between all pairs of stages within each environment in two RIL populations. (A) to (C) High-oil population (B73 × BY804) in Beijing in 2012, Hainan in 2012 and Beijing in 2013. (D) to (E) Lodging-resistance population (Zheng58 × HD568) in Hainan in 2012 and Beijing in 2013. V10: the tenth-leaf stage; DTS: days to silking; AS10: 10 days after silking; AS20: 20 days after silking; AF30: 30 days after silking; AS40: 40 days after silking; AS50: 50 days after silking. Figure S2. Comparison of the physical map and genetic map constructed with bin markers in the high-oil population (B73 × BY804). The x-axis refers to the linear order of bins based on physical positions in the maize reference genome, and the y-axis denotes the order of bins based on genetic distance in the linkage map; LG: linkage group; Chr.: chromosome. Figure S3. Illustration of pQTL8 identified in various situations. Violin plots denote the difference between genotypes derived from each parent; HO: the high-oil population (B73 × BY804); LR: the lodging-resistance population (Zheng58 × HD568); RPR: rind penetrometer resistance; V10: the tenth-leaf stage; DTS: days to silking; AS10: 10 days after silking; AS20: 20 days after silking; AF30: 30 days after silking; AS40: 40 days after silking; AS50: 50 days after silking; 2012H: Hainan in 2012; 2013B: Beijing in 2013.
Additional file 2: of Effects of cataract surgery and intra-ocular lens implantation on visual function and quality of life in age-related cataract patients: a systematic review protocol
Creators: name: Shalu Jain
name: Rajshekar, Kavitha
name: Aggarwal, Anjana
name: Akshay Chauhan
name: Gauba, Vijay
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy
subject: Computational Biology

description: An example search strategy for EMBASE. (DOCX 19 kb)
Additional file 1 of Upregulated dual oxidase 1-induced oxidative stress and caspase-1-dependent pyroptosis reflect the etiologies of heart failure
Creators: name: Li, Yan Song
name: Xia, Jingwen
name: Chen, Chang Yuan
name: Ren, Shu Hong
name: He, Mao Rong
Publisher: name: figshare
Year: 2024
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Supplementary Material 1.
Additional file 2: of Inequities in breast cancer treatment in sub-Saharan Africa: findings from a prospective multi-country observational study
Creators: name: Foerster, Milena
name: Anderson, Benjamin
name: McKenzie, Fiona
name: Galukande, Moses
name: Anele, Angelica
name: Adisa, Charles
name: Annelle Zietsman
name: Schuz, Joachim
name: Silva, Isabel Santos
name: McCormack, Valerie
Publisher: name: figshare
Year: 2019
Subjects: subject: Pharmacology
subject: Biotechnology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Table S2. provides a descriptive table of the predictors used in the present analysis restricted to the untreated women. (DOCX 28 kb)
MHD instability in differentially rotating cylindric flows
Creators: name: Rüdiger, G.
name: Zhang, Y.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: The possibility that the magnetic shear-flow instability (MRI, Balbus-Hawley instability) might give rise to turbulence in a cylindric Couette flow is investigated through numerical simulations. The study is linear and the fluid flow is supposed to be incompressible and differentially rotating with a simple velocity profile with $Ω= a+b/R^2$. The simplicity of the model is counterbalanced by the fact that the study is fully global in all three spatial directions with boundaries on each side; finite diffusivities are also allowed. The investigation is also carried out for several values of the azimuthal wavenumber of the perturbations in order to analyse whether non-axisymmetric modes might be preferred, which might produce, in a non-linear extension of the study, a self-sustained magnetic field. We find that with magnetic field the instability is easier to be excited than without magnetic field. The critical Reynolds number for Pm$=1$ is of order 50 independent of whether the nonmagnetic flow is stable or not. Also we find that i) the magnetic field strongly reduces the number of Taylor vortices, ii) the angular momentum is transported outwards and iii) for finite c ylinders a netto dynamo-alpha effect results which is negative for the upper part of the cylinder and which is positive for the lower part of the cylinder. For magnetic Prandtl number smaller than unity the critical Reynolds number scales with Pm$^{-0.65}$. If this was true even for very small magnetic Prandtl number (e.g. liquid sodium) the critical Reynolds number should reach the value 10$^5$ which is, however, also characteristic for nonlinear fi nite-amplitude hydrodynamic Taylor-Couette turbulence -- so that we easily have to expect the simultaneous existence of both sorts of instabi lities in cold accretion disks.
description: 6 pages, 11 figures, submitted to A&A
Apristus reticulatus SCHAUM. First 1857
Creators: name: Wrase, DW
Publisher: name: Zenodo
Year: 2009
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Carabidae
Apristus
Apristus reticulatus

description: Apristus reticulatus SCHAUM 1857
A z e r b a i j a n: Abşeron: Dzangi, 50 km W Baku, 8.VI.2007, K. Orszulik leg. (13, 1♀, cWR). - Astara: Astara, 8.V.2007, K. Orszulik leg. (13, cWR). - Lerik: Allar-Lerik, 23.V.2007, K. Orszulik leg. (1♀, cWR).
G e o r g i a: Mzcheta-Mtianeti: Transcaucasus, Tbilissi, Tbilissi lake, 23.VII.1985, Wrase leg. (233, cWR). Mzcheta near Tbilissi, 4.-23.VI.1987, Wrase & Schülke leg. (13, 1♀, cWR). Same data but: 12./ 13.VI.1987 (13, 1♀, cWR). Arakhlo near Bolnissi, Khrami river, 27.VI.1986, Wrase & Schülke leg. (233, 1♀, cWR).
G r e e c e: Dodekánissa:Ródos, Laerma, Lardos env., 28.VI.2007 (2♀♀)/ 3.VII.2007 (2♀♀), K. Orszulik leg. (cWR). Kalathos, Lindos env., 1.VII.2007, K. Orszulik leg. (13, cWR).
I s r a e l: North District: Upper Galilee, 3 km W Ma’ala Gamla, ca - 200 m (stony bank of sluggish stream), 32°53.469’N / 035°39.608’E, 22.IV.2006, Wrase leg. [5A] (1 spcm., cWR). Upper Galilee, Ha Khula Valley, Ma’agar Einan lake, 73 m, 33°05.137’N / 035°34.730’E (shore, gravel, sandy/loamy soil), 1./ 2.V.2006, Th. Assmann leg., Wrase leg. [23A] (about 30 spcms., cASSM, cWR).
L e b a n o n: North Province: Zgharta City, right tributary of Nahr Abou Ali river, bank, 80 m, 34°23’32’’N / 35°53’42’’E, 28.V.2006, D. Frenzel leg. (13, cWR).
 Widely distributed, from Balkan Peninsula, Turkey, Iran to Middle Asia (CATPAL 1: KABAK 2003: 431, the record from Italy, KABAK l.c., not confirmed by VIGNA TAGLIANTI 2004, and supposingly referring on A. europaeus MATEU 1980). After having seen a very large series (about 135 specimens) from its whole range I confirm a large variability in external characters in geographical respect, though the construction of the median lobe including internal sac is constant in specimens from different regions. The Israeli specimens differ only in a somewhat stronger reduction of the reticulation of upper surface which makes the specimens a little more shiny. A thorough investigation could show that several taxa (A. schmidti KIRSCHENHOFER 1988, described from Tadzhikistan, and A. baderlei KIRSCHENHOFER 1988, described from Turkmenistan) belong to A. reticulatus SCHAUM. First records for Georgia, Israel, and Lebanon.
description: Published as part of Wrase, DW, 2009, New or interesting records of Carabid beetles from Europe, Madeira, northern Africa, Turkey, from the Near East, Iran, Iraq, Kuwait, and Pakistan, with nomenclatorial and taxonomic notes (Coleoptera, Carabidae, Bembidiini, Brachinini, Cyclosomini, Elaphrini, Harpalini, Lebiini, Nebriini, Platynini,, pp. 901-935 in Linzer biologische Beiträge 41 (1) on page 924, DOI: 10.5281/zenodo.5276330