cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Improving soil health in apple and pear orchards
Creators: name: Davis, Max
Publisher: name: Lancaster University
Year: 2025
Subjects: soil health
APPLE ORCHARD
Plant diversity
Pear orchard
Drought
Management
GHG emissions

description: Commercial apple and pear orchards represent a small but important source
 of food production. Contemporary research has targeted ways to improve
 orchard ecosystem services such as pollination and natural enemies through
 sown wildflower strips. The potential benefits of increased plant
 diversity in orchard alleyways to improve soil health have not been
 considered. This project aimed to answer this question through four
 research objectives. Initially, apple and pear orchard management and its
 influence on soil processes was reviewed to provide context and highlight
 areas for further research. Then, a field study benchmarked soil health in
 apple orchards with and without wildflower strips. No consistent trends
 were found in biological, chemical, or physical soil health indicators.
 Following this I performed a lab study using intact soil cores from
 wildflower and conventionally managed orchard alleyways to measure the
 response (CO2) of orchard soils to drought and rewetting. No difference in
 responses was detected between management. Results from these studies,
 alongside the management review, indicated orchard management practices,
 such as agrochemical application and soil compaction from trafficking, may
 stifle any benefits plant diversity may have on soil health. A fourth
 chapter explored the effects of representative orchard covers in mesocosms
 on soil processes and aboveground productivity. A litter decomposition
 experiment using mesocosm litter was also performed. Significant effects
 on nitrogen cycling and aboveground productivity were detected in pots
 containing two or more functional groups, with dominant biomass Trifolium
 pratense likely driving these effects. Plant available nitrogen (NH₄+ +
 NO₃_) in soil was also shown to be significantly reduced under the
 presence of forbs. Litter containing two or more functional groups was
 also found to increase the rate of litter mass loss by 100% over six
 months. Overall, this thesis examines orchard soil health, and how soil
 health may change under management, drought stress, or how function may be
 influenced by plant functional groups.
DIALOGUES OF THE CARMELITES A SCENIC DESIGN
Creators: name: Herald, Tyler Roy
Publisher: name: Digital Repository at the University of Maryland
Year: 2018
Subjects: subject: Theater
subject: DIALOGUES OF THE CARMELITES
subject: OPERA
subject: SCENIC DESIGN
subject: THEATRE

description: The purpose of this thesis is to provide research, paperwork, production photographs, and other materials that document the scenic design process of Dialogues of the Carmelites at the University of Maryland - College Park, Maryland Opera Studio. This thesis contains: research images; sketches; photographs of 1/4” scale modeling; photographs of the final full color 1/4” scale model; a full set of drafting plates and paint elevations; a properties list and research book to detail each hand prop, furniture piece, and consumable; archival production photos to document the completed design; and finally, a post-production reflection on the entire process.
Clove, a Scenic Design
Creators: name: Ouellette, Richard
Publisher: name: Digital Repository at the University of Maryland
Year: 2018
Subjects: subject: Design
subject: CLOVE
subject: DEVISED
subject: SCENIC
subject: THEATRE

description: The purpose of this thesis is to provide research, supporting paperwork, production photographs, and other materials that document the scenic design process for the production of Clove, a devised, multidisciplinary work written and directed by Paige Hernandez. This thesis contains the following: research images; sketches; photographs of 1/4” scale sketch modeling; continued explorations of the design in the form of additional research, sketches, renderings, and 1/4” scale models; photographs of the final full color 1/4” scale model; a full set of drafting plates and paint elevations; a properties list and research book to detail each hand prop, furniture piece, and consumable; archival production photos to document the completed design; and finally, a post-production reflection on the entire process.
Additional file 4 of Purine salvage promotes treatment resistance in H3K27M-mutant diffuse midline glioma
Creators: name: Peterson, Erik R.
name: Sajjakulnukit, Peter
name: Scott, Andrew J.
name: Heaslip, Caleb
name: Andren, Anthony
name: Wilder-Romans, Kari
name: Zhou, Weihua
name: Palavalasa, Sravya
name: Korimerla, Navyateja
name: Lin, Angelica
name: O’Brien, Alexandra
name: Kothari, Ayesha
name: Zhao, Zitong
name: Zhang, Li
name: Morgan, Meredith A.
name: Venneti, Sriram
name: Koschmann, Carl
name: Jabado, Nada
name: Lyssiotis, Costas A.
name: Castro, Maria G.
name: Wahl, Daniel R.
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Plant Biology
subject: Virology

description: Additional file 4: Supplemental Table 2. Post-RT FC for the top 25 metabolites between H3K27M-isogenic cell line pairs. Metabolite name and average post-RT FC in H3K27M-KO and H3K27M DIPGXIII and BT245 cell line pairs and difference in abundance between H3K27M and H3K27M-KO values. Purine metabolites denoted by an asterisk (*).
Additional file 1 of Seasonal dynamics of Amblyomma sculptum: a review
Creators: name: de Paula, Luiza Gabriella Ferreira
name: do Nascimento, Rafael Moreira
name: Franco, Artur de Oliveira
name: Szabó, Matias Pablo Juan
name: Labruna, Marcelo Bahia
name: Monteiro, Caio
name: Krawczak, Felipe da Silva
Publisher: name: figshare
Year: 2022
Subjects: subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Table S1. Additional data on collection methodology applied by Amblyomma sculptum seasonal dynamic studies between 1990 and 2022.
sj-docx-1-pie-10.1177_09544089231218118 - Supplemental material for Improvement in tribological and hydrophobic properties of thrust plate of gear pump through oxyacetylene flame spraying in diverse cooling Medium
Creators: name: Sharma, Anubhav K
name: Kumar, Niranjan
name: Das, Alok K
Publisher: name: SAGE Journals
Year: 2023
Subjects: Engineering not elsewhere classified
Materials Engineering not elsewhere classified

description: Supplemental material, sj-docx-1-pie-10.1177_09544089231218118 for Improvement in tribological and hydrophobic properties of thrust plate of gear pump through oxyacetylene flame spraying in diverse cooling Medium by Anubhav K Sharma, Niranjan Kumar and Alok K Das in Proceedings of the Institution of Mechanical Engineers, Part E: Journal of Process Mechanical Engineering
Additional file 5 of Purine salvage promotes treatment resistance in H3K27M-mutant diffuse midline glioma
Creators: name: Peterson, Erik R.
name: Sajjakulnukit, Peter
name: Scott, Andrew J.
name: Heaslip, Caleb
name: Andren, Anthony
name: Wilder-Romans, Kari
name: Zhou, Weihua
name: Palavalasa, Sravya
name: Korimerla, Navyateja
name: Lin, Angelica
name: O’Brien, Alexandra
name: Kothari, Ayesha
name: Zhao, Zitong
name: Zhang, Li
name: Morgan, Meredith A.
name: Venneti, Sriram
name: Koschmann, Carl
name: Jabado, Nada
name: Lyssiotis, Costas A.
name: Castro, Maria G.
name: Wahl, Daniel R.
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Plant Biology
subject: Virology

description: Additional file 5: Supplemental Figure 3. Radiation-induced metabolite abundance changes vary. A.) and B.) Quantification of representative metabolites glutamine in DIPGXIII cells (A.) and aspartate in BT245 cells (B.) whose RT-induced abundance changes were similar despite the presence or absence of the H3K27M mutation. C.) and D.) Quantification of representative metabolites xanthine in DIPGXIII cells (C.) and dGDP/ADP in BT245 cells (D.) whose RT-induced abundance varied based on the expression of the H3K27M mutation. Statistical analyses were performed using a two-tailed t-test in GraphPad Prism 10.0.
sj-docx-1-dhj-10.1177_20552076231210663 - Supplemental material for Barriers to and facilitators of online health information-seeking behaviours among cancer patients: A systematic review
Creators: name: Ferraris, Giulia
name: Monzani, Dario
name: Coppini, Veronica
name: Conti, Lorenzo
name: Maria Pizzoli, Silvia Francesca
name: Grasso, Roberto
name: Pravettoni, Gabriella
Publisher: name: SAGE Journals
Year: 2023
Subjects: subject: Health and Community Services
subject: Cardiology
subject: Endocrinology
subject: Geriatrics and Gerontology
subject: Nursing not elsewhere classified
subject: Oncology and Carcinogenesis not elsewhere classified
subject: Aged Health Care
subject: Public Health and Health Services not elsewhere classified
subject: Engineering not elsewhere classified
subject: Anthropology
subject: FOS: Sociology
subject: Cultural Studies not elsewhere classified
subject: Information and Computing Sciences not elsewhere classified
subject: Organisation and Management Theory
subject: Science Policy
subject: Social Policy
subject: Sociology

description: Supplemental material, sj-docx-1-dhj-10.1177_20552076231210663 for Barriers to and facilitators of online health information-seeking behaviours among cancer patients: A systematic review by Giulia Ferraris, Dario Monzani, Veronica Coppini, Lorenzo Conti, Silvia Francesca Maria Pizzoli, Roberto Grasso and Gabriella Pravettoni in DIGITAL HEALTH
sj-docx-1-tam-10.1177_17588359231221336 – Supplemental material for Combined use of Anlotinib with chemotherapy in patients with advanced ovarian cancer: a real-world cohort study and meta-analysis
Creators: name: Hong, XinYi
name: Qiu, ShanHu
name: Ding, Bo
name: Xu, Hao
name: Shen, Yang
Publisher: name: SAGE Journals
Year: 2024
Subjects: Oncology and Carcinogenesis not elsewhere classified
Aged Health Care
Pharmacology and Pharmaceutical Sciences not elsewhere classified
Respiratory Diseases

description: Supplemental material, sj-docx-1-tam-10.1177_17588359231221336 for Combined use of Anlotinib with chemotherapy in patients with advanced ovarian cancer: a real-world cohort study and meta-analysis by XinYi Hong, ShanHu Qiu, Bo Ding, Hao Xu and Yang Shen in Therapeutic Advances in Medical Oncology
Additional file 6 of Purine salvage promotes treatment resistance in H3K27M-mutant diffuse midline glioma
Creators: name: Peterson, Erik R.
name: Sajjakulnukit, Peter
name: Scott, Andrew J.
name: Heaslip, Caleb
name: Andren, Anthony
name: Wilder-Romans, Kari
name: Zhou, Weihua
name: Palavalasa, Sravya
name: Korimerla, Navyateja
name: Lin, Angelica
name: O’Brien, Alexandra
name: Kothari, Ayesha
name: Zhao, Zitong
name: Zhang, Li
name: Morgan, Meredith A.
name: Venneti, Sriram
name: Koschmann, Carl
name: Jabado, Nada
name: Lyssiotis, Costas A.
name: Castro, Maria G.
name: Wahl, Daniel R.
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Plant Biology
subject: Virology

description: Additional file 6: Supplemental Figure 4. Stable isotope tracing of U13C-Glucose uptake and usage in purine synthesis. A.) Schematic of glucose metabolism through glycolysis and the Pentose Phosphate Pathway shunt towards purine synthetic pathways. Schematic was created using BioRender.com. B.) Relative enrichment of U13C-Glucose-derived label in F16BP pools in unirradiated DIPGXIII H3K27M-isogenic cells. C.-G) Relative abundance of13C-labeled (C.) F16BP, (D.) R5P, (E.) IMP, (F.)AMP, and (G.) GMP in DIPGXIII H3K27M-isogenic cells. Data are normalized to H3K27M-KO samples. Statistical analyses were performed using two-tailed t-tests in GraphPad Prism 10.0.
POTENTIAL IMPACT OF VARIATION IN THE SEAWATER STRONTIUM TO CALCIUM RATIO ON CORAL PALEOTHERMOMETRY IN THE FLORIDA KEYS, USA
Creators: name: Khare, Agraj
Publisher: name: Digital Repository at the University of Maryland
Year: 2018
Subjects: subject: Paleoclimate science
subject: Chemical oceanography
subject: Coral
subject: florida keys
subject: Paleoclimate
subject: paleotemperature
subject: seawater
subject: Sr/Ca

description: Standard methods of reconstructing past sea surface temperatures with coral skeletal Sr/Ca ratios assume that the seawater Sr/Ca ratio is constant. However, data to support this assumption are sparse in coral reef environments, in part because analytical techniques capable of determining seawater Sr/Ca with sufficient accuracy and precision are time-consuming and not widely available. This work presents a new method to measure seawater Sr/Ca based on inductively coupled plasma atomic emission spectrometry that can be easily adopted by many coral paleothermometry laboratories. The work also presents a spatially gridded study of summer and winter seawater Sr/Ca from the middle Florida Keys Reef Tract. The results indicate that seawater Sr/Ca in nearshore waters influenced by the Florida Bay varies by ~0.1 mmol/mol. The observed variation could lead to errors of ~2°C in temperature reconstructions and suggests that corals growing in waters influenced by Florida Bay are less suited for paleoclimate studies.
The Emergence of the Fascist Aesthetic in Early German Cinema
Creators: name: Timmons, Wendy Cassandra Ellen
Publisher: name: Digital Repository at the University of Maryland
Year: 2018
Subjects: subject: German literature
subject: Film studies
subject: fascist aesthetic
subject: German cinema
subject: Nazi cinema
subject: Weimar cinema

description: My thesis explores the development of a fascist aesthetic in German films, examining three significant, active filmmakers between 1922 and 1939 (Fritz Lang, Arnold Fanck, and Leni Riefenstahl), whose works feature an aesthetic continuity before and after 1933. Despite political differences, formal and thematic similarities exist in the works of these filmmakers, which have sometimes been discussed in the context of a “fascist aesthetic” that was initially conceptualized in the Weimar era and became increasingly instrumentalized by filmmakers during the Nazi era.

	While scholars have long debated the idea and substance of a fascist aesthetic, renewed debates about the concept at the contemporary moment underscore the importance of reconsidering the topic at the point of its origin. I approach the problem by contextualizing this aesthetic in the forms it takes pre- and post-1933 and emphasizing that this aesthetic is comprised of motifs and images that are contextually specific.
Additional file 2 of Seasonal dynamics of Amblyomma sculptum: a review
Creators: name: de Paula, Luiza Gabriella Ferreira
name: do Nascimento, Rafael Moreira
name: Franco, Artur de Oliveira
name: Szabó, Matias Pablo Juan
name: Labruna, Marcelo Bahia
name: Monteiro, Caio
name: Krawczak, Felipe da Silva
Publisher: name: figshare
Year: 2022
Subjects: subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 2: Table S2. Results from Amblyomma sculptum seasonal dynamic studies between 1990 and 2022 and mean photoperiod (PP: daylight length in hours) at the time of highest availability of each active stage.
"The Biggest Con in History": American Myth-Making in the Stage and Screen Adaptations of Anastasia
Creators: name: Weyman, Jennifer Elizabeth
Publisher: name: Digital Repository at the University of Maryland
Year: 2018
Subjects: subject: Music history
subject: American studies
subject: Russian history
subject: Anastasia
subject: Cold War
subject: Feminism
subject: Foreign policy
subject: Immigration
subject: Musical Theater

description: The story of Anastasia Nikolaevna Romanova has been engrained in the American imagination for nearly a century. This tale has often been told on stage and screen, depicting Anastasia and her most famous impersonator: Anna Anderson. The adaptation of Anna and Anastasia’s tale that has made the most lasting impact is the 1951 French play, Anastasia, by Marcelle Maurette, and its 1954 English translation by Guy Bolton. Four more adaptations have followed that progenitor play: the 1956 film, Anastasia; the 1965 operetta, Anya; the 1997 animated film, Anastasia; and the 2017 musical, Anastasia. These five artistic adaptations evolved from one another, navigating their own history alongside changing American values. This thesis situates each production within American sociopolitics of the twentieth and twenty-first centuries, revealing how each production is far more indicative of American ideals than Russian history, particularly with regards to immigration, foreign policy, and feminism.
Additional file 7 of Purine salvage promotes treatment resistance in H3K27M-mutant diffuse midline glioma
Creators: name: Peterson, Erik R.
name: Sajjakulnukit, Peter
name: Scott, Andrew J.
name: Heaslip, Caleb
name: Andren, Anthony
name: Wilder-Romans, Kari
name: Zhou, Weihua
name: Palavalasa, Sravya
name: Korimerla, Navyateja
name: Lin, Angelica
name: O’Brien, Alexandra
name: Kothari, Ayesha
name: Zhao, Zitong
name: Zhang, Li
name: Morgan, Meredith A.
name: Venneti, Sriram
name: Koschmann, Carl
name: Jabado, Nada
name: Lyssiotis, Costas A.
name: Castro, Maria G.
name: Wahl, Daniel R.
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Plant Biology
subject: Virology

description: Additional file 7: Supplemental Figure 5. Stable isotope tracing of de novo and salvage purine synthesis. A.) and B.) Schematics for (A.) 15N-Gln tracing and (B.) 2D-Hpx and the respective labeling pattern of each purine metabolite. Schematics were created using BioRender.com. C.) and D.) Percent of tracer metabolite enrichment in (C.)15N-Gln and (D.) 2D-Hpx pools in unirradiated DIPGXIII H3K27M-isogenic cells. E.) FC in relative 15N-labeled GMP(left) and AMP (right) abundance between irradiated H3K27M-isogenic cell lines. Data are normalized to H3K27M-KO samples. F.) FC in relative deuterium-labeled GMP (left) andAMP (right) abundance between irradiated H3K27M-isogenic cell lines. Data are normalized to H3K27M-KO samples. Statistical analyses were performed using two-tailed t-tests in GraphPad Prism 10.0.
Central Publication Cost Reporting
Creators: name: Stein, Lisa-Marie
Publisher: name: Deutsches Elektronen-Synchrotron, DESY, Hamburg
Year: 2024

description: openCost: The Road To Publication Cost Transparency - The Next Stage, Regensburg, Germany, 7 Oct 2024 - 9 Oct 2024
description: The Hands-on Lab offers practical insights and an open exchange for publication cost managers. The focus is on the effective processing of publication fees in scientific institutions as a contribution to the sustainable establishment of an information budget. We invite you to look over each other's shoulders as we demonstrate individual workflows and meet collective challenges. We all share the overarching goal of optimizing structures and making structural adjustments in order to enable central cost monitoring in support of the OA transformation and to come closer to the conceptual implementation of an information budget. Scientific publishing and the associated costs are a complex endeavor: In the jungle of cost models, publishing agreements and terminology, we will jointly examine concrete case studies based on invoices. Participants are invited to contribute ideas, arguments, everyday reports, sample invoices or similar materials. While sifting through heterogeneous internal processes, we will come across homogeneous problems and questions. Topics such as internal communication, the cost management department, terminologies, cost splitting, currency conversions, data transfers to funding bodies or OpenAPC are just some of the aspects that can be addressed in order to learn from each other and develop best practices. The experience of the openCost project will also be incorporated into the hands-on lab. Using the repositories of DESY and the University of Regensburg, practical exercises can be carried out and workflows from invoice receipt and documentation in a cost module to invoice payment can be simulated using centralized processes.
title: Séminaire 2 : Les franges du phénoménal
Publisher: name: Ambiances Architectures Urbanités
Year: 2022

description: Cette deuxième séance de séminaire dans le cadre du projet ANR  « Sensibilia. Des approches sensibles pour penser les transformations des milieux de vie » arpentera les limites (au sens mathématique) du phénoménal, ce que William James, à propos de la   conscience, nommait « ses franges ». Cette zone grise où se présentent vaguement des choses sans que l’on sache si elles sont réellement là ou pas, si elles sont agissantes ou non...
Additional file 8 of Purine salvage promotes treatment resistance in H3K27M-mutant diffuse midline glioma
Creators: name: Peterson, Erik R.
name: Sajjakulnukit, Peter
name: Scott, Andrew J.
name: Heaslip, Caleb
name: Andren, Anthony
name: Wilder-Romans, Kari
name: Zhou, Weihua
name: Palavalasa, Sravya
name: Korimerla, Navyateja
name: Lin, Angelica
name: O’Brien, Alexandra
name: Kothari, Ayesha
name: Zhao, Zitong
name: Zhang, Li
name: Morgan, Meredith A.
name: Venneti, Sriram
name: Koschmann, Carl
name: Jabado, Nada
name: Lyssiotis, Costas A.
name: Castro, Maria G.
name: Wahl, Daniel R.
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Plant Biology
subject: Virology

description: Additional file 8: Supplemental Figure 6. Purine metabolic enzyme expression. A-E.) Publicly available RNAseq Z-score data for (A.) IMPDH1, (B.) IMPDH2, (C.) GMPS, (D.) ADSS, and (E.) APRT transcript expression from pediatric high-grade gliomas (pHGG) was obtained through PedCBioPortal and filtered to include only samples with known H3 mutational status (for both H3F3A and HIST1H3B) to include all known H3WT (n=59) and combined H3K27M (H3F3A-mut+HIST1H3B-mut) samples (n=44). F.) RNAseq Z-score data for all common de novo purine synthesis enzymes in H3WT or H3K27M-mutant pHGG tumors. Statistical analyses were performed using two-tailed t-tests in GraphPad Prism 10.0.
Additional file 3 of Trypanosoma cruzi iron superoxide dismutases: insights from phylogenetics to chemotherapeutic target assessment
Creators: name: Hickson, Jéssica
name: Athayde, Lucas Felipe Almeida
name: Miranda, Thainá Godinho
name: Junior, Policarpo Ademar Sales
name: dos Santos, Anderson Coqueiro
name: da Cunha Galvão, Lúcia Maria
name: da Câmara, Antônia Cláudia Jácome
name: Bartholomeu, Daniella Castanheira
name: de Souza, Rita de Cássia Moreira
name: Murta, Silvane Maria Fonseca
name: Nahum, Laila Alves
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 3: Table S1. Primers to amplify T. cruzi FeSOD-A and FeSOD-B genes. Abbreviations: Temp, Predicted annealing temperature. Figure S3. PCR amplification products of FeSOD-A and FeSOD-B genes of 8 T. cruzi strains. Electrophoresis was performed in a 1% agarose gel stained with GelRed™ (Biotium). The molecular weight markers 1-kb Plus DNA Ladder (Invitrogen) were used. Abbreviations: NC, Negative control of reaction without template. Table S2. Data of read depth and coverage analysis. The depth read values and coverage proportion in the genomic regions (GenBank: MZ825448–MZ825457) for each FeSOD type of genes and the respective normalized value (gene/genome depth). Depth was calculated using the value for each position of the gene. The coverage corresponds to the proportion of position that has reads in the gene, and normalized values are the depth of the genes divided by the mean of genome depth. Table S3. Sequence assembly information. Reads refers to the number of reads used for sequence assembly; Consensus refers to the length (nt) of the consensus sequence. Sequence assembly was performed using Phred-Phrap-Consed.
The openCost metadata schema
Creators: name: Broschinski, Christoph
name: Stein, Lisa-Marie
Publisher: name: Deutsches Elektronen-Synchrotron, DESY, Hamburg
Year: 2024

description: openCost: The Road To Publication Cost Transparency - The Next Stage, Regensburg, Germany, 7 Oct 2024 - 9 Oct 2024
description: Within the framework of openCost, the project team has developed a metadata schema for costs associated with scholarly publishing, in collaboration with a number of various stakeholders. In addition to modelling cost data for individual items, modelling of contracts and their associated costs has also been developed. The metadata schema is needed to enable an automated and standardised exchange of cost data in order to improve cost transparency on an institutional, national and international level. For data exchange, openCost proposes the well-established OAI-PMH protocol, leading us to propose an XML serialisation first.In this talk we present the results in detail and some use cases. The first part focuses on the schema for fee-based, individual articles, which includes Open Access (e.g. APC) and non-Open Access costs (e.g. page or colour charges) as well as costs for processing fees (e.g. costs for bank transfer, credit cards etc.). In the second part, we illustrate the schema for contracts, which contains data related to payment models like transformative agreements, association memberships or subscriptions. In addition to cost data, this schema also includes unique identifiers, allowing individual publications to be directly linked to specific contracts.
sj-docx-1-pwq-10.1177_03616843231176222 - Supplemental material for A Large-Scale Test of the Reality Constraint and Ingroup Bias Accounts of Women's Support for Male Privilege
Creators: name: Owuamalam, Chuma Kevin
name: Caricati, Luca
name: Bonetti, Chiara
Publisher: name: SAGE Journals
Year: 2023
Subjects: subject: Gender studies
subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology

description: Supplemental material, sj-docx-1-pwq-10.1177_03616843231176222 for A Large-Scale Test of the Reality Constraint and Ingroup Bias Accounts of Women's Support for Male Privilege by Chuma Kevin Owuamalam, Luca Caricati, and Chiara Bonetti in Psychology of Women Quarterly
What are the differences in vitamins’ content between plant-based milk alternatives (PBMA) and cow’s milk? - Supplemental material
Creators: name: Antunes, Irene
name: A. G. Quaresma, M.
name: Pinto, C.
name: Gonçalves, H.
name: Roseiro, C.
name: Bexiga, R.
Publisher: name: figshare
Year: 2025
Subjects: classificationCode: 300602
subject: Food chemistry and food sensory science

description: Limit of determination (LOD) and limit of quantification (LOQ) for each vitamin and vitamer, and the principal components’ eigenvalues, loadings of the variables, and the principal components’ loadings of samples of PCA performed.
What are the differences in vitamins’ content between plant-based milk alternatives (PBMA) and cow’s milk? - Supplemental material
Creators: name: Antunes, Irene
name: A. G. Quaresma, M.
name: Pinto, C.
name: Gonçalves, H.
name: Roseiro, C.
name: Bexiga, R.
Publisher: name: figshare
Year: 2024
Subjects: classificationCode: 300602
subject: Food chemistry and food sensory science

description: Limit of determination (LOD) and limit of quantification (LOQ) for each vitamin and vitamer, and the principal components’ eigenvalues, loadings of the variables, and the principal components’ loadings of samples of PCA performed.
Additional file 9 of Purine salvage promotes treatment resistance in H3K27M-mutant diffuse midline glioma
Creators: name: Peterson, Erik R.
name: Sajjakulnukit, Peter
name: Scott, Andrew J.
name: Heaslip, Caleb
name: Andren, Anthony
name: Wilder-Romans, Kari
name: Zhou, Weihua
name: Palavalasa, Sravya
name: Korimerla, Navyateja
name: Lin, Angelica
name: O’Brien, Alexandra
name: Kothari, Ayesha
name: Zhao, Zitong
name: Zhang, Li
name: Morgan, Meredith A.
name: Venneti, Sriram
name: Koschmann, Carl
name: Jabado, Nada
name: Lyssiotis, Costas A.
name: Castro, Maria G.
name: Wahl, Daniel R.
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Plant Biology
subject: Virology

description: Additional file 9: Supplemental Figure 7. Single-agent mycophenolic acid has mixed efficacy in vitro. A.) and C.) Endpoint neurosphere counts of DIPGXIII (A.) and BT245 (C.) cells treated with increasing concentrations of MPA (0-10mM) during the long-term neurosphere growth assays. B.) and D.) Long-term growth curves over time of DIPXIII (B.) and BT245 (D.) cells treated with increasing concentrations of MPA (0-10mM). Endpoint and growth curve neurosphere data was acquired using a Cytation 5 plate reader and attached BioSpa incubator (Agilent Technologies).
Additional file 8 of Trypanosoma cruzi iron superoxide dismutases: insights from phylogenetics to chemotherapeutic target assessment
Creators: name: Hickson, Jéssica
name: Athayde, Lucas Felipe Almeida
name: Miranda, Thainá Godinho
name: Junior, Policarpo Ademar Sales
name: dos Santos, Anderson Coqueiro
name: da Cunha Galvão, Lúcia Maria
name: da Câmara, Antônia Cláudia Jácome
name: Bartholomeu, Daniella Castanheira
name: de Souza, Rita de Cássia Moreira
name: Murta, Silvane Maria Fonseca
name: Nahum, Laila Alves
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 8: Table S5.In vitro trypanocidal activity, cytotoxicity and selectivity index of selected drugs. Superscripts: 1Reduction (%) of the amastigote and trypomastigote by drug; 2drug concentration that inhibits 50% of the growth of the amastigotes and trypomastigotes of T. cruz;3drug concentration that inhibits 50% of the L929 cell viability;4CC50 L929/IC50 T. cruz. IC50 and CC50 values were calculated by linear interpolation. The determination of CC50 of polaprezinc was not possible due low solubility in concentrations > 50 μM. Abbreviations: ND, Not determined. Fig. S7. The diagram illustrates FeSOD-A, FeSOD-B and FeSOD-C characteristics, including cellular localization (orange boxes), protein length (blue boxes), gene copies (green boxes) and protein domains (pink boxes). Information was retrieved from public databases and tools: ENA, Pfam, TriTrypDB, and UniProt. Reference sequences were selected for FeSOD-A (AAC47548.2), FeSOD-B (EAN92179.1) and FeSOD-C (TcCLB.511735.60). Only gene copy numbers were obtained by our prediction using the T. cruzi CL-Brener genome.
Additional file 10 of Purine salvage promotes treatment resistance in H3K27M-mutant diffuse midline glioma
Creators: name: Peterson, Erik R.
name: Sajjakulnukit, Peter
name: Scott, Andrew J.
name: Heaslip, Caleb
name: Andren, Anthony
name: Wilder-Romans, Kari
name: Zhou, Weihua
name: Palavalasa, Sravya
name: Korimerla, Navyateja
name: Lin, Angelica
name: O’Brien, Alexandra
name: Kothari, Ayesha
name: Zhao, Zitong
name: Zhang, Li
name: Morgan, Meredith A.
name: Venneti, Sriram
name: Koschmann, Carl
name: Jabado, Nada
name: Lyssiotis, Costas A.
name: Castro, Maria G.
name: Wahl, Daniel R.
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Plant Biology
subject: Virology

description: Additional file 10: Supplemental Figure 8. DIPGXIII-LUC/GFP tumor-bearing Rag1-KO mouse weights are minimally affected after treatment course. Normalized measurement of mouse weight over treatment time course for DIPGXIII-GFP/LUC xenograft tumor-bearing mice. Blue box indicates treatment period.
Additional file 11 of Purine salvage promotes treatment resistance in H3K27M-mutant diffuse midline glioma
Creators: name: Peterson, Erik R.
name: Sajjakulnukit, Peter
name: Scott, Andrew J.
name: Heaslip, Caleb
name: Andren, Anthony
name: Wilder-Romans, Kari
name: Zhou, Weihua
name: Palavalasa, Sravya
name: Korimerla, Navyateja
name: Lin, Angelica
name: O’Brien, Alexandra
name: Kothari, Ayesha
name: Zhao, Zitong
name: Zhang, Li
name: Morgan, Meredith A.
name: Venneti, Sriram
name: Koschmann, Carl
name: Jabado, Nada
name: Lyssiotis, Costas A.
name: Castro, Maria G.
name: Wahl, Daniel R.
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Plant Biology
subject: Virology

description: Additional file 11: Supplemental Figure 9. U13C-Glucose tracing of glucose uptake and PPP activity following RT. A.) and C.) FC in 13C label enrichment in (A.) F16BP and (C.) R5Pin H3K27M-isogenic cell lines 3hrs after 4Gy single dose RT. RT conditions for each cell line are normalized to the respective 0Gy control. B.) and D.) FC of unlabeled and 13C-labeled ion abundances following RT for (B.)F16BP and (D.) R5P in H3K27M-isogenic cell lines following irradiation with a single 4Gy dose of RT. Statistical analyses were performed using two-tailed t-tests in GraphPad Prism 10.0.
Additional file 12 of Purine salvage promotes treatment resistance in H3K27M-mutant diffuse midline glioma
Creators: name: Peterson, Erik R.
name: Sajjakulnukit, Peter
name: Scott, Andrew J.
name: Heaslip, Caleb
name: Andren, Anthony
name: Wilder-Romans, Kari
name: Zhou, Weihua
name: Palavalasa, Sravya
name: Korimerla, Navyateja
name: Lin, Angelica
name: O’Brien, Alexandra
name: Kothari, Ayesha
name: Zhao, Zitong
name: Zhang, Li
name: Morgan, Meredith A.
name: Venneti, Sriram
name: Koschmann, Carl
name: Jabado, Nada
name: Lyssiotis, Costas A.
name: Castro, Maria G.
name: Wahl, Daniel R.
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Plant Biology
subject: Virology

description: Additional file 12: Supplemental Figure 10.15N-Gln and 2D-Hpx Isotope tracing of purine synthesis following RT. A.) Percent of tracer metabolite enrichment of 15N-Gln in H3K27M-isogenic cells 3hrs after 4Gy RT. B.) FC in 15N label enrichment in GMP in H3K27M-isogenic cell lines 3hrs after 4Gy single dose RT. RT conditions for each cell line are normalized to the respective 0Gy control. C.) FC in relative 15N-labeled GMP abundance between irradiated H3K27M-isogenic cell lines. Data are normalized to H3K27M-KO samples. D.) FC in 15N-labeled AMP ion abundance 3hrs after 4Gy single dose RT in H3K27M-isogenic cell lines. RT-treated samples were normalized to their respective unirradiated controls. E.) FC in the relative abundance of 15N-labeled AMP in DIPGXIII H3K27M-isogenic cell lines before (gray bars) and 3hrs after 4Gy RT (blue bars). Data are normalized to untreated control samples. F.) FC in relative 15N-labeled AMP abundance between irradiated H3K27M-isogenic cell lines.Data are normalized to H3K27M-KO samples. G.)Percent of tracer metabolite enrichment of 2D-Hpx in H3K27M-isogenic cells 3hrs after 4Gy RT. H.) FC in deuterium label enrichment in GMP in H3K27M-isogenic cell lines 3hrs after 4Gy single dose RT. RT conditions for each cell line are normalized to the respective 0Gy control. I.) FC in relative deuterium-labeled GMP abundance between irradiated H3K27M-isogenic cell lines. Data are normalized to H3K27M-KO samples. J.) FC in 2D-labeled AMP ion abundance 3hrs after 4Gy single dose RT in H3K27M-isogenic cell lines. RT-treated samples were normalized to their respective unirradiated controls. K.) FC in the relative abundance of 2D-labeled AMP in DIPGXIII H3K27M-isogenic cell lines before (gray bars) and 3hrs after 4Gy RT (blue bars). Data are normalized to untreated control samples. L.) FC in relative 2D-labeled AMP abundance between irradiated H3K27M-isogenic cell lines. Data are normalized to H3K27M-KO samples. Statistical analyses were performed using two-tailed t-tests in GraphPad Prism 10.0.
Codeclub and the importance of workshops in public libraries
Creators: name: Gilabert Sempere, Sergi
Publisher: name: Zenodo
Year: 2022
Subjects: programming
workshop
public libraries
primary school students
secondary school students
college students
bobcatsss
bobcatsss 2022
Bobcatsss
BOBCATSSS

description: Public libraries offer workshops to spread knowledge beyond the books they offer. Public libraries in Catalonia have been offering programming activities for beginners organized by Code Club Catalonia for years, where college students voluntarily teach programming to primary and secondary school students through projects and activities that the organization Code Club Catalonia makes available to educators. This paper presents my experience leading a group of students in this activity and the importance of workshops in public libraries to promote the use of these and to bring them closer to children and youngsters, based on statistical data, testimonials from the students I had and my own experience.
Additional file 13 of Purine salvage promotes treatment resistance in H3K27M-mutant diffuse midline glioma
Creators: name: Peterson, Erik R.
name: Sajjakulnukit, Peter
name: Scott, Andrew J.
name: Heaslip, Caleb
name: Andren, Anthony
name: Wilder-Romans, Kari
name: Zhou, Weihua
name: Palavalasa, Sravya
name: Korimerla, Navyateja
name: Lin, Angelica
name: O’Brien, Alexandra
name: Kothari, Ayesha
name: Zhao, Zitong
name: Zhang, Li
name: Morgan, Meredith A.
name: Venneti, Sriram
name: Koschmann, Carl
name: Jabado, Nada
name: Lyssiotis, Costas A.
name: Castro, Maria G.
name: Wahl, Daniel R.
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Plant Biology
subject: Virology

description: Additional file 13: Supplemental Figure 11.13C8-guanine tracing of purine salvage before and after RT. A.) Percent enrichment of 13C8-guanine tracer in DIPGXIII H3K27M-isogenic cell lines before and 3hrs after 4Gy RT. B.)FC in relative abundance of 13C8-labeled GMP in unirradiated DIPGXIII H3K27M-isogenic cell lines. Data are normalized to H3K27M-KO samples. C.) FC in relative abundance of 13C8--labeled GMP between DIPGXIII H3K27M-isogenic cell lines 3hrs after 4Gy single dose RT. Data are normalized to H3K27M-KO samples. Statistical analyses were performed using two-tailed t-tests in GraphPad Prism 10.0.
title: Russland, vom Schopf der Welt betrachtet…
Creators: name: Steger, Ines
Publisher: name: Fachinformationsdienst Slavistik
Year: 2009
Subjects: subject: Dom nad Oniego Wilk, Mariusz
subject: Das Haus am Onegasee Wilk, Mariusz
subject: Rezension
subject: 491.8

description: Vom Rand der Welt betrachtet sieht Russland ganz anders aus – wie auch „Jewropa“. Mariusz Wilks Tagebuch aus Karelien führt in die Abgeschiedenheit der Onegaregion, in einen faszinierenden Kulturraum, den es zu entdecken gilt.
description: novinkigegengelesen
Using clustering trees to visualise single-cell RNA-sequencing data
Creators: name: Zappia, Luke
name: Oshlack, Alicia
Publisher: name: F1000 Research Limited
Year: 2018

description: Single-cell RNA-sequencing is commonly used to interrogate complex tissues in order to identify and compare the cell types present. This type of experiment is particularly prevalent in the developmental setting. A key step in this approach is assigning cells to different clusters that are assumed to be distinct cell types. Although this can be done by comparison with reference datasets, cells are more routinely grouped using unsupervised clustering and we have catalogued more than 60 currently available scRNA-seq clustering methods. Most clustering methods have parameters which affect the number of clusters produced, either by specifying an exact number, a parameter which controls the clustering resolution or indirectly through other parameters. The clustering resolution that is chosen can have a profound effect on further analysis but it is unclear how to make this choice. Existing clustering metrics often score only single clusters or resolutions, or require datasets to be perturbed and clustered multiple times which can be infeasible for large datasets.

Here we present clustering trees, a visualisation that shows the relationship between clusters as the clustering resolution increases. In a clustering tree each cluster is represented as a graph node with edges representing the overlap in samples between clusters at different resolutions. These trees can highlight instability that may indicate over clustering and help choose which resolution to use, particularly when combined with existing domain knowledge such as the expression of marker genes. More generally, clustering trees are a compact, information-dense visualisation that can serve as an alternative to plotting cells in reduced dimensions such as t-SNE. Importantly clustering trees display information across resolutions, in contrast to more common visualisation which only show results of a single clustering. Here we explain how clustering trees are produced using the clustree R package (http://cran.r-project.org/package=clustree) and illustrate how they can be used with an example of scRNA-seq data from kidney organoids.
sj-docx-1-ltr-10.1177_13621688231178465 – Supplemental material for The role of diagnostic writing assessment in promoting Chinese EFL students’ learning autonomy: An action research study
Creators: name: Kong, Jufang
name: Pan, Mingwei
Publisher: name: SAGE Journals
Year: 2023
Subjects: subject: Education
subject: 200399 Language Studies not elsewhere classified
subject: FOS: Languages and literature

description: Supplemental material, sj-docx-1-ltr-10.1177_13621688231178465 for The role of diagnostic writing assessment in promoting Chinese EFL students’ learning autonomy: An action research study by Jufang Kong and Mingwei Pan in Language Teaching Research
Supplementary Materials from The Emergence of Non-Linear Evolutionary Trade-offs and the Maintenance of Genetic Polymorphisms
Creators: name: Hulse, Samuel Vail
name: Bruns, Emily L
Publisher: name: The Royal Society
Year: 2024
Subjects: classificationCode: 310499
subject: Evolutionary biology not elsewhere classified

description: Additional figures depicting alternative parameter sets and an adaptive dynamics model using equivalent parameters as our discrete random loci model.
PREVENCIÓN SOCIAL DEL CRIMEN
Creators: name: Wael Hikal
Publisher: name: Zenodo
Year: 2013

description: RESUMEN La seguridad pública está formada por diferentes acciones que son la prevención, las investigaciones criminales, la persecución de los delincuentes, el tratamiento de las víctimas de los delitos, la impartición y administración de la justicia, el tratamiento penitenciario y la reinserción social. En lo que concierne al desarrollo de la sociedad, la función más importante de la prevención de la antisocialidad se refiere a la presencia de una protección adecuada.  Para los desarrolladores de políticas de seguridad pública o preventólogos debe ser importante tratar de remediar aquellas situaciones que generan inseguridad; por ejemplo: desempleo, pobreza,  falta de educación, consumo de drogas, prostitución, robos, lesiones, etcétera. Esto se puede realizar mediante una estrecha colaboración entre las autoridades responsables en materias de desarrollo de la ciudad, los propietarios de bienes inmobiliarios y las autoridades encargadas de la seguridad de la comunidad. Palabras clave: Control social, Regeneración social, Seguridad pública, Políticas de seguridad social, Título.
Low Power Electronics and Thermal Management for the Cryogenic Temperature Regime
Creators: name: Ridgard, George
Publisher: name: Lancaster University
Year: 2025
Subjects: cryogenic
MOSFET
thermal analysis
Noise temperature
THERMOMETRY

description: Understanding how power dissipation affects the local temperature
 distribution is key when conducting sensitive experiments at low
 temperature. This thesis develops strategies for reducing the power
 consumption of electronics at cryogenic temperatures and for managing the
 thermal gradients created by the dissipated power. First, the low
 temperature characterisation of low threshold Field Effect Transistors
 devices is shown, to assess their suitability for low supply voltage
 cryogenic circuits. Secondly, the \textit{in situ} testing of resistors is
 used to optimise two differential amplifiers for gain, power consumption,
 and bandwidth. Finally, results from both experiments lead to the
 demonstration of a novel way of reducing supply voltages in low
 temperature electronics, `cryogenic threshold engineering'. This is
 the use of FETs with negative room temperature thresholds, that move close
 to zero once cooled to low temperatures. This technique was demonstrated
 in a common source amplifier. Both theory, simulation and experiment
 showed a factor of 8 improvement in efficiency from 295K to 4K. In this
 thesis a setup designed to mimic a quantum computing was thermally
 investigated at milli-kelvin temperatures. This involved monitoring the
 copper mount, interposer, PCB, and internal IC temperature as a function
 of power dissipated in the IC. A experiment was performed to show
 aluminium wirebonds can act as superconducting heat switches between hot
 and cold devices in the same setup. Voltage noise thermometry with the
 cross-correlation technique was demonstrated inside the IC. This was
 demonstrated to work in the range 300~mK to 8~K. At 500~mK the benchmark
 error was 5\%. Also, expression for the relative error of the
 cross-correlation measurement is derived. Finally, a technique to speed up
 cross-correlation, frequency averaging, is demonstrated in room
 temperature resistors. Then it is applied to a literature example to
 demonstrate its application in reducing the uncertainty in noise
 thermometry.