cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
The influence of upper boundary conditions on molecular kinetic atmospheric escape simulations
Creators: name: Mogan, S. R. Carberry
name: Tucker, O. J.
name: Johnson, R. E.
Publisher: name: arXiv
Year: 2021
Subjects: subject: Earth and Planetary Astrophysics (astro-ph.EP)
subject: Atmospheric and Oceanic Physics (physics.ao-ph)
subject: Space Physics (physics.space-ph)
subject: FOS: Physical sciences

description: Molecular kinetic simulations are typically used to accurately describe the tenuous regions of the upper atmospheres on planetary bodies. These simulations track the motion of particles representing real atmospheric atoms and/or molecules subject to collisions, the object's gravity, and external influences. Because particles can end up in very large ballistic orbits, upper boundary conditions (UBC) are typically used to limit the domain size thereby reducing the time for the atmosphere to reach steady-state. In the absence of a clear altitude at which all molecules are removed, such as a Hill sphere, an often used condition is to choose an altitude at which collisions become infrequent so that particles on escape trajectories are removed. The remainder are then either specularly reflected back into the simulation domain or their ballistic trajectories are calculated analytically or explicitly tracked so they eventually re-enter the domain. Here we examine the effect of the choice of the UBC on the escape rate and the structure of the atmosphere near the nominal exobase in the convenient and frequently used 1D spherically symmetric approximation. Using Callisto as the example body, we show that the commonly used specular reflection UBC can lead to significant uncertainties when simulating a species with a lifetime comparable to or longer than a dynamical time scale, such as an overestimation of escape rates and an inflated exosphere. Therefore, although specular reflection is convenient, the molecular lifetimes and body's dynamical time scales need to be considered even when implementing the convenient 1D spherically symmetric simulations in order to accurately estimate the escape rate and the density and temperature structure in the transition regime.
Additional file 1 of The impact of neutrophil extracellular trap from patients with systemic lupus erythematosus on the viability, CD11b expression and oxidative burst of healthy neutrophils
Creators: name: Alimohammad Fatemi
name: Alipour, Razieh
name: Khanahmad, Hossein
name: Alsahebfosul, Fereshteh
name: Alireza Andalib
name: Abbasali Pourazar
Publisher: name: figshare
Year: 2021
Subjects: subject: Biophysics
subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Physiology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Hematology

description: Additional file 1. Supplementary Document 1.
Large deviations and Chernoff bound for certain correlated states on a spin chain
Creators: name: Hiai, Fumio
name: Mosonyi, Milan
name: Ogawa, Tomohiro
Publisher: name: arXiv
Year: 2007
Subjects: subject: Mathematical Physics (math-ph)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: In this paper we extend the results of Lenci and Rey-Bellet on the large deviation upper bound of the distribution measures of local Hamiltonians with respect to a Gibbs state, in the setting of translation-invariant finite-range interactions. We show that a certain factorization property of the reference state is sufficient for a large deviation upper bound to hold and that this factorization property is satisfied by Gibbs states of the above kind as well as finitely correlated states. As an application of the methods the Chernoff bound for correlated states with factorization property is studied. In the specific case of the distributions of the ergodic averages of a one-site observable with respect to an ergodic finitely correlated state the spectral theory of positive maps is applied to prove the full large deviation principle.
description: some typos corrected, short proof of Lemma A.2 added
Plan-based Job Scheduling for Supercomputers with Shared Burst Buffers
Creators: name: Kopanski, Jan
name: Rzadca, Krzysztof
Publisher: name: arXiv
Year: 2021
Subjects: subject: Distributed, Parallel, and Cluster Computing (cs.DC)
subject: FOS: Computer and information sciences
subject: D.4.1; I.2.8

description: The ever-increasing gap between compute and I/O performance in HPC platforms, together with the development of novel NVMe storage devices (NVRAM), led to the emergence of the burst buffer concept - an intermediate persistent storage layer logically positioned between random-access main memory and a parallel file system. Despite the development of real-world architectures as well as research concepts, resource and job management systems, such as Slurm, provide only marginal support for scheduling jobs with burst buffer requirements, in particular ignoring burst buffers when backfilling. We investigate the impact of burst buffer reservations on the overall efficiency of online job scheduling for common algorithms: First-Come-First-Served (FCFS) and Shortest-Job-First (SJF) EASY-backfilling. We evaluate the algorithms in a detailed simulation with I/O side effects. Our results indicate that the lack of burst buffer reservations in backfilling may significantly deteriorate scheduling. We also show that these algorithms can be easily extended to support burst buffers. Finally, we propose a burst-buffer-aware plan-based scheduling algorithm with simulated annealing optimisation, which improves the mean waiting time by over 20% and mean bounded slowdown by 27% compared to the burst-buffer-aware SJF-EASY-backfilling.
description: 27th International Conference on Parallel and Distributed Computing, Lisbon, Portugal, September 1-3, 2021, Proceedings; Corrected line 19 in Algorithm 2
Behaviourism and language acquisition
Creators: Elena Nicoladis, Anna Petursdottir, and Christopher B. Sturdy
Publisher: name: University of Alberta Library
Year: 2024

To what extent can human language learning be described, explained, and predicted from basic learning principles? Following the Skinner/Chomsky debate, many scholars avoided invoking basic learning principles, concentrating instead on cognitive approaches. We argue that these cognitive approaches have often ended up incorporating basic learning principles, either implicitly or explicitly. In the meantime, research on the communication among nonhuman animals and on language learning in clinical populations has shed light on how basic learning principles might contribute to learning communicative systems. We look forward to future research testing how far basic learning principles can go to explaining human language learning.
Electron transfer reactions of ruthenium porphyrins
Creators: name: Barley, Mark Howard
Publisher: name: University of British Columbia
Year: 2010

description: The chemistry and electrochemistry of complexes of the type Ru[sup II](OEP)L₁L₂ (L₁,L₂= CO, P[sup n]Bu₃, PPh₃, AsPh₃, CN⁻, CS, MeCN, py and Im) were studied and several examples of intramolecular electron transfer (IMET) were observed. [the rest of the abstract can be found in the attached PDF file]
Additional file 2 of The impact of neutrophil extracellular trap from patients with systemic lupus erythematosus on the viability, CD11b expression and oxidative burst of healthy neutrophils
Creators: name: Alimohammad Fatemi
name: Alipour, Razieh
name: Khanahmad, Hossein
name: Alsahebfosul, Fereshteh
name: Alireza Andalib
name: Abbasali Pourazar
Publisher: name: figshare
Year: 2021
Subjects: subject: Biophysics
subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Physiology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Hematology

description: Additional file 2. Supplementary Document 2.
Path Integral for Quantum Operations
Creators: name: Tarasov, Vasily E.
Publisher: name: arXiv
Year: 2007
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: In this paper we consider a phase space path integral for general time-dependent quantum operations, not necessarily unitary. We obtain the path integral for a completely positive quantum operation satisfied Lindblad equation (quantum Markovian master equation). We consider the path integral for quantum operation with a simple infinitesimal generator.
description: 24 pages, LaTeX
Point vortex dynamics in three-dimensional ageostrophic balanced flows
Creators: name: Weiss, Jeffrey B.
Publisher: name: arXiv
Year: 2021
Subjects: subject: Fluid Dynamics (physics.flu-dyn)
subject: Chaotic Dynamics (nlin.CD)
subject: Atmospheric and Oceanic Physics (physics.ao-ph)
subject: FOS: Physical sciences

description: Geophysical turbulent flows, characterized by rapid rotation, quantified by small Rossby number, and stable stratification, often self-organize into a collection of coherent vortices, referred to as a vortex gas. The lowest order asymptotic expansion in Rossby number is quasigeostrophy which has purely horizontal velocities and cyclone-anticylone antisymmetry. Ageostrophic effects are important components of many geophysical flows and, as such, these phenomena are not well-modeled by quasigeostrophy. The next order correction in Rossby number, which includes ageostrohpic affects, is so-called balanced dynamics. Balanced dynamics includes ageostrophic vertical velocity and breaks the geostrophic cyclone-anticylone antisymmetry. Point vortex solutions are well known in 2d and quasigeostrophic dynamics and are useful for studying the vortex gas regime of geophysical turbulence. Here we find point vortex solutions in fully three dimensional continuously stratified $QG^{+1}$ dynamics, a particular formulation of balanced dynamics. Simulations of $QG^{+1}$ point vortices show several interesting features not captured by quasigeostrophic point vortices including significant vertical transport on long timescales. The ageostrophic component of $QG^{+1}$ point vortex dynamics renders them useful in modeling flows where quasigeostrophy filters out important physical processes.
description: 19 pages, 12 figures, in press in Journal of Fluid Mechanics
Identifying a source of a bacterial blight resistance gene xa5 in rice variety IR62266 and development of a functional marker PAxa5, the easy agarose based detection
Creators: name: Siriporn Korinsak
name: Kanyanat Sirithunya
name: Theerayut Toojinda
Publisher: name: Genetics Society of Thailand
Year: 2014
Subjects: xa5, bacterial blight, rice, functional marker

description: 3, 7, Thai Journal of Genetics
The influence of metallic particle size on the mechanical properties of PTFE-Al-W powder composites
Creators: name: Cai, J.
name: Nesterenko, V. F.
name: Vecchio, K. S.
name: Herbold, E. B.
name: Benson, D. J.
name: Jiang, F.
name: Addiss, J. W.
name: Walley, S. M.
name: Proud, W. G.
Publisher: name: arXiv
Year: 2007
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The dynamic mechanical properties of reactive materials (e.g., high density mixtures of polytetraflouroethylene (PTFE), aluminum (Al) and tungsten (W) powders) can be tailored by changing the morphology of the particles and porosity. Cold isostatically pressed PTFE-Al-W powder composites with fine metallic particles and a higher porosity exhibited higher ultimate compressive strength than less porous composites having equivalent mass ratios with coarse W particles. The mesoscale force chains between the fine metallic particles are responsible for this unusual phenomenon. We observed macrocracks below the critical failure strain for the matrix and a competition between densification and fracture in some porous samples in dynamic tests.
description: 18 pages, 5 figures
Analysis of paternity testing results by Identifiler? system in Thailand
Creators: name: Nattapon Plodthong
name: Takol Chareonsirisuthigul
name: Putthapoom Lumjiaktase
name: Budsaba Rerkamnuaychoke
Publisher: name: Genetics Society of Thailand
Year: 2014
Subjects: paternity testing, autosomal STR markers, combined paternity index, power of exclusion, Thailand

description: 2, 7, Thai Journal of Genetics
Integrative modeling of macroscopic and microscopic pathophysiology Parkinson’s Disease
Creators: name: Murray, Christopher S.
Publisher: name: No Publisher Supplied
Year: 2024

description: In this thesis, we present a comprehensive exploration of various aspects of Parkinson’s Disease (PD), with a focus on unraveling underlying molecular mechanisms and investigating potential therapeutic interventions. We begin with a literature review covering genes, proteins, and pathways linked to genetic PD, alongside clinical trial data. Utilizing this knowledge, we develop a Quantitative Systems Pharmacology (QSP) model capturing the complexity of PD pathophysiology. Within this model, we develop a computational tool that attempts to simulate metabolite concentration dynamics, offering insights into disease progression. Additionally, we design a tool for analyzing protein interactions within the PD Map from the University of Luxembourg, identifying proteins in PD-related compartments and their functions. This projects provide a holistic framework for understanding PD’s molecular underpinnings and offer insights into potential therapeutic strategies.
Law of Genome Evolution Direction : Coding Information Quantity Grows
Creators: name: Luo, Liaofu
Publisher: name: arXiv
Year: 2008
Subjects: subject: Genomics (q-bio.GN)
subject: Cell Behavior (q-bio.CB)
subject: FOS: Biological sciences

description: The problem of the directionality of genome evolution is studied. Based on the analysis of C-value paradox and the evolution of genome size we propose that the function-coding information quantity of a genome always grows in the course of evolution through sequence duplication, expansion of code, and gene transfer from outside. The function-coding information quantity of a genome consists of two parts, p-coding information quantity which encodes functional protein and n-coding information quantity which encodes other functional elements except amino acid sequence. The evidences on the evolutionary law about the function-coding information quantity are listed. The needs of function is the motive force for the expansion of coding information quantity and the information quantity expansion is the way to make functional innovation and extension for a species. So, the increase of coding information quantity of a genome is a measure of the acquired new function and it determines the directionality of genome evolution.
description: 16 pages
Single electron-spin memory with a semiconductor quantum dot
Creators: name: Young, Robert J.
name: Dewhurst, Samuel J.
name: Stevenson, R. Mark
name: Atkinson, Paola
name: Bennett, Anthony J.
name: Ward, Martin B.
name: Cooper, Ken
name: Ritchie, David A.
name: Shields, Andrew J.
Publisher: name: arXiv
Year: 2007
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We show storage of the circular polarisation of an optical field, transferring it to the spin-state of an individual electron confined in a single semiconductor quantum dot. The state is subsequently readout through the electronically-triggered emission of a single photon. The emitted photon shares the same polarisation as the initial pulse but has a different energy, making the transfer of quantum information between different physical systems possible. With an applied magnetic field of 2 Tesla, spin memory is preserved for at least 1000 times more than the exciton's radiative lifetime.
description: 7 pages, 4 figures
"We Were Black and White Together": The Dis-Integration of Women in SNCC
Creators: name: Allebest, Amy
Publisher: name: Stanford Digital Repository
Year: 2024
Subjects: intersectional
feminism
womanism
Civil Rights Movement
SNCC
second wave
Waveland
1960s
Hayden
Master of Liberal Arts

description: The Student Nonviolent Coordinating Committee (SNCC) was one of the most diverse branches of the Black Freedom Movement, with more women and white members than almost any other Civil Rights organization at the time. From its founding in 1960, SNCC operated as a loving, egalitarian community.  By the late 1960’s, however, many SNCC women were working in the Women’s Liberation Movement, but doing so separately; largely segregated by race, many of these former “sisters” were no longer on speaking terms. My thesis explores the breach between women in SNCC. I survey the impact of the personal and collective histories that Black and white women carried with them into SNCC, the race and gender dynamics within the organization, and two feminist manifestos produced by white SNCC women in 1964-65. These documents went on to be canonized as founding documents of second-wave feminism, but they were rejected by their Black SNCC colleagues, widening a gap between women that still exists today.
Imaging Sources in the Third Realization of the International Celestial Reference Frame
Creators: name: Hunt, Lucas R.
name: Johnson, Megan C.
name: Cigan, Phillip J.
name: Gordon, David
name: Spitzak, John
Publisher: name: arXiv
Year: 2021
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Instrumentation and Methods for Astrophysics (astro-ph.IM)
subject: FOS: Physical sciences

description: The third iteration of the International Celestial Reference Frame (ICRF3) is made up of 4536 quasars observed at S/X bands using Very Long baseline Interferometry (VLBI). These sources are high redshift quasars, typically between $10.5$
description: Accepted in AJ. 22 Pages, 12 Figures
Anthropic prediction for a large multi-jump landscape
Creators: name: Schwartz-Perlov, Delia
Publisher: name: arXiv
Year: 2008
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The assumption of a flat prior distribution plays a critical role in the anthropic prediction of the cosmological constant. In a previous paper we analytically calculated the distribution for the cosmological constant, including the prior and anthropic selection effects, in a large toy ``single-jump'' landscape model. We showed that it is possible for the fractal prior distribution we found to behave as an effectively flat distribution in a wide class of landscapes, but only if the single jump size is large enough. We extend this work here by investigating a large ($N \sim 10^{500}$) toy ``multi-jump'' landscape model. The jump sizes range over three orders of magnitude and an overall free parameter $c$ determines the absolute size of the jumps. We will show that for ``large'' $c$ the distribution of probabilities of vacua in the anthropic range is effectively flat, and thus the successful anthropic prediction is validated. However, we argue that for small $c$, the distribution may not be smooth.
description: 33 pages, 7 figures Minor revisions made and references added. arXiv admin note: substantial text overlap with arXiv:0705.2562
Readersourcing 2.0: Technical Documentation
Creators: name: Michael Soprano
name: Stefano Mizzaro
Publisher: name: Zenodo
Year: 2023
Subjects: Crowdsourcing
Peer Review
Scholarly Publishing

description: This technical documentation provides an in-depth overview of the Readersourcing 2.0 ecosystem, offering detailed insights into each of its components. Whether you're a developer or user, this documentation serves as a comprehensive resource to understand the intricacies and functionalities of the Readersourcing 2.0 ecosystem.
description: See related identifiers to find the documented software and the preprint in which they are presented.
Additional file 1 of Clinical characteristics and outcomes in women and men hospitalized for coronavirus disease 2019 in New Orleans
Creators: name: Yilin Yoshida
name: Gillet, Scott A.
name: Brown, Margo I.
name: Yuanhao Zu
name: Wilson, Sarah M.
name: Sabreen J. Ahmed
name: Saritha Tirumalasetty
name: Lovre, Dragana
name: Krousel-Wood, Marie
name: Denson, Joshua L.
name: Mauvais-Jarvis, Franck
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: eFigure 1.A. Multivariable Analysis of Comorbidities and ICU by Race. eFigure 1.B. Multivariable Analysis of Comorbidities and IMV by Race. eFigure 1.C. Multivariable Analysis of Comorbidities and Death by Race. eFigure 2.A. Multivariable Analysis of Biomarkers and ICU by Race. eFigure 2.B. Multivariable Analysis of Biomarkers and IMV by Race. eFigure 2.C. Multivariable Analysis of Biomarkers and Death by Race. eTable 1. Demographic Characteristics and comorbidities prior to admission– Blacks vs. non-Blacks. eTable 2. Clinical symptoms and biomarkers at admission – Blacks vs. non-Blacks.
Stabilization for mapping class groups of 3-manifolds
Creators: name: Hatcher, Allen
name: Wahl, Nathalie
Publisher: name: arXiv
Year: 2007
Subjects: subject: Geometric Topology (math.GT)
subject: Algebraic Topology (math.AT)
subject: FOS: Mathematics

description: We prove that the homology of the mapping class group of any 3-manifold stabilizes under connected sum and boundary connected sum with an arbitrary 3-manifold when both manifolds are compact and orientable. The stabilization also holds for the quotient group by twists along spheres and disks, and includes as particular cases homological stability for symmetric automorphisms of free groups, automorphisms of certain free products, and handlebody mapping class groups. Our methods also apply to manifolds of other dimensions in the case of stabilization by punctures.
description: v4: improvements in the exposition as well as improvements in the main combinatorial theorem in the paper, concerning complexes built from joins
Assessing the compact-binary merger candidates reported by the MBTA pipeline in the LIGO-Virgo O3 run: probability of astrophysical origin, classification, and associated uncertainties
Creators: name: Andres, Nicolas
name: Assiduo, Maria
name: Aubin, Florian
name: Chierici, Roberto
name: Estevez, Dimitri
name: Faedi, Francesca
name: Guidi, Gianluca Maria
name: Juste, Vincent
name: Marion, Frédérique
name: Mours, Benoît
name: Nitoglia, Elisa
name: Sordini, Viola
Publisher: name: arXiv
Year: 2021
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We describe the method used by the Multi-Band Template Analysis (MBTA) pipeline to compute the probability of astrophysical origin, $p_{astro}$, of compact binary coalescence candidates in LIGO-Virgo data from the third observing run (O3). The calculation is performed as part of the offline analysis and is used to characterize candidate events, along with their source classification. The technical details and the implementation are described, as well as the results from the first half of the third observing run (O3a) published in GWTC-2.1. The performance of the method is assessed on injections of simulated gravitational-wave signals in O3a data using a parameterization of $p_{astro}$ as a function of the MBTA combined ranking statistic. Possible sources of statistical and systematic uncertainties are discussed, and their effect on $p_{astro}$ quantified.
description: 14 pages, 13 figures
Additional file 1 of Common social determinants for overweight and obesity, and dental caries among adolescents in Northern Norway: a cross-sectional study from the Tromsø Study Fit Futures cohort
Creators: name: Stangvaltaite-Mouhat, Lina
name: Anne-Sofie Furberg
name: Drachev, Sergei N.
name: Trovik, Tordis A.
Publisher: name: figshare
Year: 2021
Subjects: subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 1: Table 1. Operationalization of variables for statistical analyses. The variables were measured or taken from the questionnaire.
Readersourcing 2.0: Technical Documentation
Creators: name: Soprano, Michael
name: Mizzaro, Stefano
Publisher: name: Zenodo
Year: 2019
Subjects: Crowdsourcing
Peer Review
Scholarly Publishing

description: Technical documentation for the Readersourcing 2.0 ecosystem.
description: See related identifiers to find the documented software and the preprint in which they are presented.
On the Weak Measurement of Velocity in Bohmian Mechanics
Creators: name: Duerr, Detlef
name: Goldstein, Sheldon
name: Zanghi, Nino
Publisher: name: arXiv
Year: 2008
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: In a recent article (New Journal of Physics 9, 165, 2007), Wiseman has proposed the use of so-called weak measurements for the determination of the velocity of a quantum particle at a given position, and has shown that according to quantum mechanics the result of such a procedure is the Bohmian velocity of the particle. Although Bohmian mechanics is empirically equivalent to variants based on velocity formulas different from the Bohmian one, and although it has been proven that the velocity in Bohmian mechanics is not measurable, we argue here for the somewhat paradoxical conclusion that Wiseman's weak measurement procedure indeed constitutes a genuine measurement of velocity in Bohmian mechanics. We reconcile the apparent contradictions and elaborate on some of the different senses of measurement at play here.
description: 13 pages
Deformed Schwarzschild horizons in second-order perturbation theory: mass, geometry, and teleology
Creators: name: Bonetto, Riccardo
name: Pound, Adam
name: Sam, Zeyd
Publisher: name: arXiv
Year: 2021
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: In recent years, gravitational-wave astronomy has motivated increasingly accurate perturbative studies of gravitational dynamics in compact binaries. This in turn has enabled more detailed analyses of the dynamical black holes in these systems. For example, Pound et al. [Phys. Rev. Lett. 124, 021101 (2020)] recently computed the surface area of a Schwarzschild black hole's apparent horizon, perturbed by an orbiting body, to second order in the binary's mass ratio. In this paper, we take that as the starting point for a comprehensive study of a perturbed Schwarzschild black hole's apparent and event horizon at second perturbative order, deriving generic formulas for the first- and second-order corrections to the horizons' radial profiles, surface areas, Hawking masses, and intrinsic curvatures. We find that the two horizons are remarkably similar, and that any teleological behavior of the event horizon is suppressed in several ways. Critically, we establish that at all orders, the perturbed event horizon in a small-mass-ratio binary is effectively localized in time. Even more pointedly, the event horizon is identical to the apparent horizon at linear order regardless of the source of perturbation, implying that the seemingly teleological "tidal lead", previously observed in linearly perturbed event horizons, is not genuinely teleological in origin. The two horizons do generically differ at second order, but their Hawking masses remain identical, implying that the event horizon obeys the same energy-flux balance law as the apparent horizon. At least in the case of a binary system, the difference between their surface areas remains extremely small even in the late stages of inspiral. In the course of our analysis, we also numerically illustrate puzzling behaviour in the black hole's motion around the binary's center of mass.
description: 39 pages, 4 figures. v2 modifies the title, abstract, and Conclusion to better highlight the content. v3 corrects minor typos
Aumolertinib: A Review in Non-Small Cell Lung Cancer
Creators: name: Shirley, Matt
name: Keam, Susan J.
Publisher: name: Adis Journals
Year: 2022
Subjects: Medicine
Cancer

description: Declarations
Funding The preparation of this review was not supported by any external funding.
Authorship and Conflict of interest M. Shirley and S. Keam are salaried employees of Adis International Ltd/Springer Nature, and declare no relevant conflicts of interest. All authors contributed to the review and are responsible for the article content.
Ethics approval, Consent to participate, Consent to publish, Availability of data and material, Code availability Not applicable.
Additional information about this Adis Drug Review can be found here.

AbstractAumolertinib (formerly almonertinib; Ameile®) is an oral, third-generation epidermal growth factor receptor (EGFR) tyrosine kinase inhibitor (EGFR-TKI) that is selective for mutant EGFR over wild-type EGFR. It has been developed for the treatment of advanced EGFR mutation-positive non-small cell lung cancer (NSCLC). In the phase 3 AENEAS trial conducted in Chinese patients, aumolertinib as first-line treatment significantly prolonged progression-free survival (PFS) and duration of response (DoR) compared with gefitinib in patients with advanced EGFR mutation-positive NSCLC; overall survival (OS) data from this study are immature. In the phase 1/2 APOLLO trial, aumolertinib showed good clinical activity (based on objective response rate, PFS, DoR and OS) in Chinese patients with locally advanced or metastatic EGFR T790M mutation-positive NSCLC who had progressed on or after prior EGFR-TKI therapy. Aumolertinib has a generally manageable tolerability profile; adverse events associated with wild-type EGFR inhibition (e.g. rash and diarrhoea) were less frequent with aumolertinib than gefitinib in AENEAS. Thus, aumolertinib is a promising new option for both first-line and second-line treatment in patients with advanced EGFR mutation-positive NSCLC.

© Springer Nature Switzerland AG 2022
Slave spin cluster mean field theory away from half-filling: Application to the Hubbard and the extended Hubbard Model
Creators: name: Hassan, S. R.
name: Medici, L. de'
Publisher: name: arXiv
Year: 2008
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: A new slave-spin representation of fermion operators has recently been proposed for the half-filled Hubbard model. We show that with the addition of a gauge variable, the formalism can be extended to finite doping. The resulting spin problem can be solved using the cluster mean-field approximation. This approximation takes short-range correlations into account by exact diagonalization on the cluster, whereas long-range correlations beyond the size of clusters are treated at the mean-field level. In the limit where the cluster has only one site and the interaction strength $U$ is infinite, this approach reduces to the Gutzwiller approximation. There are some qualitative differences when the size of the cluster is finite. We first compute the critical $U$ for the Mott transition as a function of a frustrating second-neighbor interaction on lattices relevant for various correlated systems, namely the cobaltites, the layered organic superconductors and the high-temperature superconductors. For the triangular lattice, we also study the extended Hubbard model with nearest-neighbor repulsion. In additionto a uniform metallic state, we find a $\sqrt(3) \times \sqrt(3)$ charge density wave in a broad doping regime, including commensurate ones. We find that in the large $U$ limit, intersite Coulomb repulsion $V$ strongly suppresses the single-particle weight of the metallic state.
description: 10 pages, 11 figures, submitted to PRB
Total synthesis of stemodane-type diterpenoids : (±)-maritimol, (±)-stemodin, (±)-stemodinone and (±)-2-desoxystemodinone
Creators: name: Suckling, Ian Douglas
Publisher: name: University of British Columbia
Year: 2010

description: This thesis describes work leading to the completion of a total synthesis of (±)-stemodin 3 and (±)-maritimol 5, as well as a formal total synthesis of (±)-stemodinone 4 and (±)-2-desoxystemodinone 6. The tricyclic enone 66 was prepared, in a series of steps, from the Weiland-Miescher ketone 68. Photoaddition of allene to this enone provided equal amounts of two photoadducts, 79 and 80. Ozonolysis, followed by treatment of the resulting 1,3-dione with sodium methoxide in methanol, generated the same keto ester 65 from both photoadducts. Two possible mechanisms for the unexpected conversion of the oc-photoadduct 80 into the keto ester 65 are presented. The keto ester 65 was elaborated, in a series of steps, into the tetracyclic dlone 63. The key step in this reaction sequence was a Thorpe-Ziegler condensation of the dinitriles 77. The gemlnal methyl groups required at C-4 in the target natural products 3 - 6 were introduced using a 5-step sequence. Treatment of the resulting alkylated dione 62 with methyltriisopropoxytitaniura afforded the keto alcohol 61, admixed with its C-13 epimer, in the ratio of 5:1. This keto alcohol 61 was subsequently converted into (±)-maritimol 5, and also into (±)-stemodin 3, via compound 55. Since the keto alcohol 61 has previously been converted into (±)-2-desoxystemodinone 6, and 55 has been converted into (±)-stemodinone 4, the work described here also constitutes a formal total synthesis of compounds 4 and 6.
Mapping Spatially Varying Additive Biases in Cosmic Shear Data
Creators: name: Kitching, T. D.
name: Deshpande, A. C.
name: Taylor, P. L.
Publisher: name: arXiv
Year: 2021
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: In this paper we address the challenge of extracting maps of spatially varying unknown additive biases from cosmic shear data. This is done by exploiting the isotropy of the cosmic shear field, and the anisotropy of a typical additive bias field, using an autocorrelation discrepancy map; which identifies significant non-Gaussian components of the map. We test this approach using simulations and find that the autocorrelation discrepancy map produces spatially varying features that are indicative of the additive bias field both in amplitude and spatial variation. We then apply this to the Dark Energy Survey Year 1 data, and find evidence for spatially varying additive biases of at most 0.002 on large-scales. The method can be used to empirically inform modelling of the spatially varying additive bias field in any cosmological parameter inference, and can act as a validation test for cosmic shear surveys.
description: Accepted to the Open Journal of Astrophysics
Additional file 2 of Common social determinants for overweight and obesity, and dental caries among adolescents in Northern Norway: a cross-sectional study from the Tromsø Study Fit Futures cohort
Creators: name: Stangvaltaite-Mouhat, Lina
name: Anne-Sofie Furberg
name: Drachev, Sergei N.
name: Trovik, Tordis A.
Publisher: name: figshare
Year: 2021
Subjects: subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Additional file 2: Table 2. Demographic characteristics, behavioral, biological and psychosocial factors among the participants of The Tromsø Study Fit Futures 1 (FF1) stratified by sex.
Shannon dimensionality of quantum channels and its application to photon entanglement
Creators: name: Pors, J. B.
name: Oemrawsingh, S. S. R.
name: Aiello, A.
name: van Exter, M. P.
name: Eliel, E. R.
name: Hooft, G. W. 't
name: Woerdman, J. P.
Publisher: name: arXiv
Year: 2008
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We introduce the concept of Shannon dimensionality D as a new way to quantify bipartite entanglement as measured in an experiment. This is applied to orbital-angular-momentum entanglement of two photons, using two state analyzers composed of a rotatable angular-sector phase plate that is lens-coupled to a single-mode fiber. We can deduce the value of D directly from the observed two-photon coincidence fringe. In our experiment, D varies between 2 and 6, depending on the experimental conditions. We predict how the Shannon dimensionality evolves when the number of angular sectors imprinted in the phase plate is increased and anticipate that D = 50 is experimentally within reach.
description: 4 pages, 3 figures, accepted for Physical Review Letters
Readersourcing 2.0: Technical Documentation
Creators: name: Soprano, Michael
name: Mizzaro, Stefano
Publisher: name: Zenodo
Year: 2018
Subjects: Crowdsourcing
Peer Review
Scholarly Publishing

description: Technical documentation for the Readersourcing 2.0 ecosystem.
description: See related identifiers to find the documented software and the preprint in which they are presented.
Discovery of a massive variable star with Z=Zo/36 in the galaxy DDO 68
Creators: name: Pustilnik, S. A.
name: Tepliakova, A. L.
name: Kniazev, A. Y.
name: Burenkov, A. N.
Publisher: name: arXiv
Year: 2008
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: The Local Volume dwarf galaxy DDO 68, from the spectroscopy of its two brightest HII regions (Knots 1 and 2) was designated as the second most metal-poor star-forming galaxy [12+log(O/H)=7.14]. In the repeated spectral observations in 2008 January with the 6-m telescope (BTA) of the HII region Knot 3 [having 12+log(O/H)=7.10+-0.06], we find a strong evidence of a transient event related to a massive star evolution. From the follow-up observation with the higher spectral resolution in 2008 February, we confirm this phenomenon, and give parameters of its emission-line spectrum comprising of Balmer HI and HeI lines. The luminosities of the strongest transient lines (Ha, Hb) are of a few 10^36 erg s^-1. We also detected an additional continuum component in the new spectrum of Knot 3, which displays the spectral energy distribution raising to ultraviolet. The estimate of the flux of this continuum leads us to its absolute V-band magnitude of ~-7.1. Based on the spectral properties of this transient component, we suggest that it is related to an evolved massive star of luminous blue variable type with Z=Zo/36. We briefly discuss observational constraints on parameters of this unique (in the aspect of the record low metallicity of the progenitor massive star) event and propose several lines of its study.
description: 6 pages, 5 Postscript figures, to appear in MNRAS Letters in June 2008 issue
Connecting 5d Higgs Branches via Fayet-Iliopoulos Deformations
Creators: name: van Beest, Marieke
name: Giacomelli, Simone
Publisher: name: arXiv
Year: 2021
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We describe how the geometry of the Higgs branch of 5d superconformal field theories is transformed under movement along the extended Coulomb branch. Working directly with the (unitary) magnetic quiver, we demonstrate a correspondence between Fayet-Iliopoulos deformations in 3d and 5d mass deformations. When the Higgs branch has multiple cones, characterised by a collection of magnetic quivers, the mirror map is not globally well-defined, however we are able to utilize the correspondence to establish a local version of mirror symmetry. We give several detailed examples of deformations, including decouplings and weak-coupling limits, in $(D_n,D_n)$ conformal matter theories, $T_N$ theory and its parent $P_N$, for which we find new Lagrangian descriptions given by quiver gauge theories with fundamental and anti-symmetric matter.
description: 47 pages, many figures
Holothuria (Thymiosycia) gracilis Semper 1868
Creators: name: O'Loughlin, P. Mark
name: Harding 1, Caroline
name: Paulay, Gustav
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Echinodermata
Holothuroidea
Holothuriida
Holothuriidae
Holothuria
Holothuria gracilis

description: Holothuria (Thymiosycia) gracilis Semper, 1868
Table 1; appendix 1; figure 2c
Material examined. Northwest Western Australia, Kimberley Region, Camden Sound, Ngalanguru Island, 25 Mar 2015, WAM Z89008 (1).
Remarks. This species identity was established by François Michonneau (UF, pers. comm.).
description: Published as part of O'Loughlin, P. Mark, Harding 1, Caroline & Paulay, Gustav, 2016, The sea cucumbers of Camden Sound in northwest Australia, including four new species (Echinodermata: Holothuroidea), pp. 7-52 in Memoirs of Museum Victoria 75 on page 14, DOI: 10.24199/j.mmv.2016.75.02, http://zenodo.org/record/8075992
The Araucaria Project: The Distance to the Sculptor Group Galaxy NGC 247 from Cepheid Variables Discovered in a Wide-Field
Creators: name: Garcia-Varela, A.
name: Pietrzynski, G.
name: Gieren, W.
name: Udalski, A.
name: Soszynski, I.
name: Walker, A.
name: Bresolin, F.
name: Kudritzki, R. P.
name: O., Szewczyk.
name: Szymanski, M.
name: Kubiak, M.
name: Wyrzykowski, L.
Publisher: name: arXiv
Year: 2008
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We report on the discovery of a Cepheid population in the Sculptor Group spiral galaxy NGC 247 for the first time. On the basis of wide-field images collected in photometric surveys in V and I bands which were conducted with three different telescopes and cameras, 23 Cepheid variables were discovered with periods ranging from 17 to 131 days. We have constructed the period-luminosity relations from these data and obtain distance moduli to NGC 247 of 28.20 $\pm$ 0.05 mag (internal error) in V, 28.04 $\pm$ 0.06 mag in I, and 27.80 $\pm$ 0.09 mag in the reddening-independent Wesenheit index. From our optical data we have determined the total mean reddening of the Cepheids in NGC 247 as E(B-V)=0.13 mag, which brings the true distance modulus determinations from the V and I bands into excellent agreement with the distance determination in the Wesenheit index. The best estimate for the true distance modulus of NGC 247 from our optical Cepheid photometry is 27.80 $\pm$0.09 (internal error) $\pm$ 0.09 mag (systematic error) which is in excellent agreement with other recent distance determinations for NGC 247 from the Tip of the Red Giant branch method, and from the Tully-Fisher relation. The distance for NGC 247 places this galaxy at twice the distance of two other Sculptor Group galaxies, NGC 300 and NGC 55, yielding supporting evidence for the filament-like structure of this group of galaxies. The reported distance value is tied to an assumed LMC distance modulus of 18.50 mag.
description: AJ accepted
Electric-Magnetic Struggle in QGP, Deconfinement and Baryons
Creators: name: Shuryak, Edward
Publisher: name: arXiv
Year: 2007
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We argue that quite unusual properties of Quark-Gluon Plasma in the RHIC temperature domain $T=(1-2)T_c$ are consequences of the approximate equilibrium between electric and magnetic sectors reached above the deconfinement temperature. Already classical study of few body motion in a electric-magnetic plasma shows abnormally large scattering rate due to the so called ``magnetic bottle'' effect. Molecular dynamics simulation have found that equal mixture of electric and magnetic quasiparticles do produce plasmas of small viscosity and even smaller diffusion rate, comparable to what is needed to explain RHIC data and also to what follows from AdS/CFT. As a separate issue, we point out that right above $T_c$ there should be surviving s-wave baryons made of quarks ($N,Δ$), as well as adjoint objects, 3-gluon and 3-monopole chains (the latter being nothing else but ``calorons'' or finite-T instantons).
description: written version of invited talk at ``Critical Point and Onset of Deconfinement", 4th International Workshop, July 9-13 2007, GSI Darmstadt,Germany
Additional file 1 of Potato virus X-mediated constitutive expression of Plutella xylostella PxSDF2L1 gene in Nicotiana benthamiana confers resistance to Phytophthora parasitica var. nicotianae
Creators: name: Ivis Moran-Bertot
name: Lianet Rodríguez-Cabrera
name: Borras-Hidalgo, Orlando
name: Siliang Huang
name: Yunchao Kan
name: Wright, Denis J.
name: Ayra-Pardo, Camilo
Publisher: name: figshare
Year: 2021
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Plant Biology

description: Additional file 1: Figure S1. PVX-mediated recombinant GFP expression in N. benthamiana. Detection of green fluorescence in epidermal cells of systemically uninoculated leaves from PVX.GFP-agroinfected plants by CLSM, 21 d.p.ai. (+30). Systemically uninoculated leaves from plants challenged with PVX.PxSDF2L1 were used as the negative control. Figure S2. PCR to detect the PVX DNA vector. PCR products after 40 cycles with specific primers (5’-gaaacctcctcggattccat-3’; 5’-tctccaaatgaaatgaacttcc-3’) for a 312-bp fragment in the 35S promoter of cauliflower mosaic virus (p35S) in PVX-based binary vectors (PVX.PxSDF2L1 or PVX.GFP) on DNase I-digested total RNA (1 μg) isolated from the root of PVX.PxSDF2L1-agroinfected plants (lane 1-6); (+) Agrobacterium tumefaciens strain GV3101 cells carrying the PVX.PxSDF2L1 vector. M, 1 kb DNA ladder.
Isospectral oscillators as a resource for quantum information processing
Creators: name: Chabane, Abdelatif
name: Mohammdi, Sidali
name: Gharbi, Abdelhakim
name: Paris, Matteo G. A.
Publisher: name: arXiv
Year: 2025
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We address quantum systems isospectral to the harmonic oscillator, as those found within the framework of supersymmetric quantum mechanics, as potential resources for continuous variable quantum information. These deformed oscillator potentials share the equally spaced energy levels of the shifted harmonic oscillator but differ significantly in that they are non-harmonic. Consequently, their ground states and thermal equilibrium states are no longer Gaussian and exhibit non-classical properties. We quantify their non-Gaussianity and evaluate their non-classicality using various measures, including quadrature squeezing, photon number squeezing, Wigner function negativity, and quadrature coherence scale. Additionally, we employ quantum estimation theory to identify optimal measurement strategies and establish ultimate precision bounds for inferring the deformation parameter. Our findings prove that quantum systems isospectral to the harmonic oscillator may represent promising platforms for quantum information with continuous variables. In turn, non-Gaussian and non-classical stationary states may be obtained and these features persist at non-zero temperature.
description: 25 pages, 7 figures