cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Three-dimensional (3-D) graphene sensors
Creators: name: University Of California Office Of The President
Publisher: name: University of California Office of the President
publisherIdentifier: https://ror.org/00dmfq477
publisherIdentifierScheme: ROR
Year: 2024

description: We propose a new collaboration between U.C. Berkeley and Lawrence Livermore National Laboratory (LLNL) to develop high-sensitivity gas sensors using 3D graphene aerogel materials, discovered at LLNL, and U.C. Berkeley resources including the ultra-high resolution aberration corrected transmission electron microscope (TEM) and the Center of Integrated Nanomechanical Systems (COINS), a multidisciplinary center for ultra-sensitive detection. Graphene is a high surface area 2D material with reactivity to gas molecules that alter transport kinetics and is ideal for gas detection. LLNL has developed an aerogel synthesis method to produce a 3D assembly that maintains the 2D properties of graphene and provides design flexibility and added functionality. Also, graphene is amenable to large-scale processing using graphene oxide (GO) precursors. LLNL has used thermal reduction of GO to show how synthesis chemistry alters surface defect site density. However, to design selective sensors, there is a need to understand mechanisms responsible for surface kinetics/interactions and changes in transport properties. U.C. Berkeley has used TEM to evaluate atomic scale dynamics and interaction of the atoms and molecules on graphene to understand transport kinetics at larger scale. The involvement of postdocs and graduate students, along with the support of COINS, will provide an opportunity for multidisciplinary training. Objectives include controlling synthesis and developing sensors for detecting carbon dioxide and oxides of nitrogen. Anticipated results include understanding the effect of synthesis and sensor design on surface properties and performance, and meeting desired sensitivity targets. Ongoing collaboration between U.C. Berkeley and LLNL is anticipated with growth into other research areas: detection of explosives and other species, other structurally similar materials (e.g., boron nitride), and other energy applications (e.g., batteries and catalysts).
Additional file 2: Table S1. of Anthropometric and metabolic indices in assessment of type and severity of dyslipidemia
Creators: name: Zaid, Muhammad
name: Ameer, Fatima
name: Rimsha Munir
name: Rashid, Rida
name: Nimrah Farooq
name: Hasnain, Shahida
name: Nousheen Zaidi
Publisher: name: Figshare
Year: 2017
Subjects: subject: Space Science
subject: Medicine
subject: Pharmacology
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Computational Biology

description: Clinical and metabolic characteristics of the study population. Table S2: Criteria for the determination of plasma lipoprotein/ lipid abnormality status. Table S3: Areas under ROC curves (AUC) and 95% confidence intervals (CI) for various anthropometric/metabolic parameters in predicting the incidence of overall dyslipidemia or different types of dyslipidemias. Results are represented as AUC (95% CI). (DOC 795 kb)
Betancurichthys Marceniuk & Oliveira & Ferraris Jr 2024, gen. nov.
Creators: name: Marceniuk, Alexandre Pires
name: Oliveira, Claudio
name: Ferraris Jr, Carl J.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Siluriformes
Ariidae
Betancurichthys

description: Betancurichthys gen. nov.
(Figs 1–3, 27)
ZooBank registration: urn:lsid:zoobank.org:act: CF91C445- 9AA0-4852-8291-6F9FD57C9CD2.
Type species: Arius madagascariensis Vaillant, 1894.
Diagnosis
Bony bridge formed by lateral ethmoid and frontal cylindrical and thin (16, 0> 1); frontal mesial laminar projection absent (23, 1> 0); posterior cranial fontanel formed by frontals and parieto-supraoccipital (25, 1> 0); otolith posterior margin rounded (74, 1> 0); dorsal crest of premaxilla beginning between lateral one-third or one-half of anterior margin (124, 0> 1); third basibranchial chalice shaped (168, 0> 1); dorsal-fin spine prolonged into filament (221, 0> 1).
Ambiguous optimization: Sesamoid bone I very long and subtriangular (145, 0> 1).
Etymology
Named after Colombian ichthyologist Ricardo Betancur-R. for his dedication to the knowledge of the taxonomy, evolution, and biogeography of marine catfishes. Gender: masculine.
Included species
Betancurichthys festinus Ng & Sparks, 2003 * sedis mutabilis Betancurichthys madagascariensis Vaillant, 1894 Betancurichthys uncinatus Ng & Sparks, 2003 * sedis mutabilis.
Habitat and distribution: Fresh and brackish waters, western Madagascar (Fig. 24).
Remarks
The genus Betancurichthys was established to accommodate species endemic to Madagascar, in the western Indian Ocean, corroborating molecular results presented by Betancur-R. (2009). Its inclusion in the Ariina is supported by the BI and ML analyses. The inclusion of Betancurichthys festinus and Betancurichthys uncinatus in the genus is provisional, based on the distribution and life habits of the species restricted to freshwater in Madagascar.
description: Published as part of Marceniuk, Alexandre Pires, Oliveira, Claudio & Ferraris Jr, Carl J., 2024, A new classification of the family Ariidae (Osteichthyes: Ostariophysi: Siluriformes) based on combined analyses of morphological and molecular data, pp. 426-476 in Zoological Journal of the Linnean Society 200 (2) on pages 454-455, DOI: 10.1093/zoolinnean/zlad078, http://zenodo.org/record/11240120
Xenylla stachi subsp. stachi Gama 1966
Creators: name: Jantarit, Sopark
name: Bedos, Anne
name: Deharveng, Louis
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Entognatha
Collembola
Hypogastruridae
Xenylla
Xenylla stachi
Xenylla stachi stachi gama, 1966

description: 16. Xenylla stachi stachi Gama, 1966
Source: Gama (1986), Bedos (1994).
Distribution in Thailand. Chiang Mai (N). Habitat: humus at 1500 m. at the entrance of a shaft in Doi Chiang Dao.
Distribution outside Thailand. Africa.
description: Published as part of Jantarit, Sopark, Bedos, Anne & Deharveng, Louis, 2016, An annotated checklist of the Collembolan fauna of Thailand, pp. 301-360 in Zootaxa 4169 (2) on page 309, DOI: 10.11646/zootaxa.4169.2.4, http://zenodo.org/record/265801
Additional file 5: of Optic-nerve-transmitted eyeshine, a new type of light emission from fish eyes
Creators: name: Fritsch, Roland
name: Ullmann, Jeremy
name: Pierre-Paul Bitton
name: Collin, Shaun
name: Michiels, Nico
Publisher: name: Figshare
Year: 2017
Subjects: subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy

description: Table with modelled effects of ONT eyeshine on perceived contrast of the eye. Comprehensive modelling data that show the contrast changes of pupil and iris caused by exhibiting ONT eyeshine, as perceived by another T. delaisi, to assess the potential role of ONT eyeshine in intraspecific communication and signalling. (PDF 59Â kb)
Xenylla thailandensis Gama 1986
Creators: name: Jantarit, Sopark
name: Bedos, Anne
name: Deharveng, Louis
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Entognatha
Collembola
Hypogastruridae
Xenylla
Xenylla thailandensis

description: 17. Xenylla thailandensis Gama, 1986 *
Source: Gama (1986), Deharveng et al. (1989), Deharveng & Bedos (1993b), Bedos (1994). Type deposition: MC, MHNG, LEITT.
Distribution in Thailand. Chiang Mai (N). Habitat: litter, soil, decaying wood and moss on ground in Doi Inthanon forest (Gama 1986), frequent at all altitudes (Bedos 1994).
Distribution outside Thailand. Only known from Thailand (Doi Inthanon).
description: Published as part of Jantarit, Sopark, Bedos, Anne & Deharveng, Louis, 2016, An annotated checklist of the Collembolan fauna of Thailand, pp. 301-360 in Zootaxa 4169 (2) on page 309, DOI: 10.11646/zootaxa.4169.2.4, http://zenodo.org/record/265801
Additional file 9: of Optic-nerve-transmitted eyeshine, a new type of light emission from fish eyes
Creators: name: Fritsch, Roland
name: Ullmann, Jeremy
name: Pierre-Paul Bitton
name: Collin, Shaun
name: Michiels, Nico
Publisher: name: Figshare
Year: 2017
Subjects: subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: Science Policy

description: Table with full optic nerve torsion data and parameters, on which the summary in Table 2 was based. (PDF 61Â kb)
Irradiated Tree Nut Flours for Use in Oral Immunotherapy
Creators: name: Penumarti, Anusha
name: Berglund, Jelena
name: Sheth, Rohini
name: Gabel, Elizabeth
name: Burks, A Wesley
name: Szczepanski, Nicole
name: Kim, Edwin H
name: Kesselring, Janelle
name: Kulis, Michael D
Publisher: name: Elsevier
Year: 2020

description:
BACKGROUND: Tree nut allergies affect an estimated 1% of the US population and is lifelong in 90% of allergic individuals. Oral immunotherapy (OIT) for food allergies is an effective method to induce desensitization in a majority of participants in trials of peanut, egg, and milk OIT. Limited trials using tree nut OIT have been reported, possibly due to the lack of standardized drug products. OBJECTIVE: Food products used in OIT are considered drugs by the Food and Drug Administration (FDA) because they are intended to modulate the individuals' immune responses to the food allergens. As such, OIT drug products must meet FDA standards for acceptable levels of microbes and undergo testing for allergenic proteins. We aimed to determine the suitability of walnut, cashew, hazelnut, and almond flours for use in OIT trials. METHODS: We employed gamma irradiation on commercially available walnut, cashew, hazelnut, and almond flours and tested their levels of microbial contamination, total protein, and allergen content, along with stability of these parameters over time. RESULTS: Our results demonstrate that irradiation of tree nut flours greatly diminishes the levels of total aerobic bacteria, mold, yeast, Escherichia coli, and Salmonella, whereas there are no substantial changes in total protein or allergen content. Importantly, the microbial levels, protein, and allergen content remained stable over a 24-month period. CONCLUSION: Irradiation of tree nut flours is a safe and effective method of processing to allow tree nut products to meet the FDA standards for OIT drug products.
Cryptarius Kailola 2004
Creators: name: Marceniuk, Alexandre Pires
name: Oliveira, Claudio
name: Ferraris Jr, Carl J.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Siluriformes
Ariidae
Cryptarius

description: Cryptarius Kailola, 2004
(Figs 1–3, 24C, 29)
Type species: Arius truncatus Valenciennes, 1840.
Diagnosis
Mesethmoid medial notch large and shallow (1, 1> 0); mesethmoid median portion very wide (2, 0> 2); epioccipital contacting small narrow area of diagonal crest associated with neural spine of fourth vertebra (44, 1> 0); epioccipital posterior process and medial crest associated with neural spine of fourth vertebra connected (45, 0> 1); vomer arrow shaped (49, 1> 3); vomer anterior margin weakly pronounced and serrated (50, 1> 0); contact face for articulation of transcapular process with basioccipital large and depressed (85, 0> 1); transcapular process at right angle to body axis (86, 0> 1); articulation between metapterygoid and quadrate by interdigitated suture in small portion of contact and by overlapping in remaining contact area (136, 0> 1); metapterygoid anterior process rounded (138, 0> 2); anterior portion of anterior ceratohyal compressed (150, 0> 1); posterolateral processes of urohyal long (160, 0> 1); posterolateral processes of urohyal almost as long as distal portion of bone (162, 2> 0); posterior portion of second basibranchial long and wide (167, 2> 0); first pharyngobranchial large and depressed (190, 0> 1); median crest associated with neural spine of fourth vertebra very high (202, 0> 1); gas bladder lateral diverticula present (243, 0> 1); lateral line not bifurcated, reaching dorsal caudal-fin lobe (247, 2> 1).
Ambiguous optimization: Interopercle anterior portion thin and acute (133, 0> 2); transverse crest associated with neural spine of fourth vertebra very high (200, 0> 1); adipose-fin base very short (222, 2> 3).
Included species
Cryptarius daugueti Chevey, 1932 * sedis mutabilis Cryptarius truncatus Valenciennes, 1840.
Habitat and distribution: Brackish waters, South and Southeast Asia (Fig. 24).
Remarks
Cryptarius was established by Kailola (2004), and has been recognized as valid by both morphological (Marceniuk and Menezes 2007, Marceniuk et al. 2012) and molecular studies (Betancur-R. 2009), but without consensus on its relationships.
description: Published as part of Marceniuk, Alexandre Pires, Oliveira, Claudio & Ferraris Jr, Carl J., 2024, A new classification of the family Ariidae (Osteichthyes: Ostariophysi: Siluriformes) based on combined analyses of morphological and molecular data, pp. 426-476 in Zoological Journal of the Linnean Society 200 (2) on page 456, DOI: 10.1093/zoolinnean/zlad078, http://zenodo.org/record/11240120
Additional file 8: of The Echinococcus canadensis (G7) genome: a key knowledge of parasitic platyhelminth human diseases
Creators: name: Maldonado, Lucas
name: Assis, Juliana
name: Araújo, Flávio
name: Salim, Anna
name: Macchiaroli, Natalia
name: Cucher, Marcela
name: Camicia, Federico
name: Fox, Adolfo
name: Rosenzvit, Mara
name: Oliveira, Guilherme
name: Kamenetzky, Laura
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Computational Biology

description: Argonaute proteins in Echinococcus. (A) Relative expression of Ago proteins in E. canadensis (G7). (B) Relative expression of Ago proteins in E. multilocularis. Actin gene Emul_190400 was used as reference. (C) Table of Echinococcus Ago proteins domains. (D) Cartoon representation of RNAse-like fold coloured by domains of Group 1 Echinococcus Ago proteins. (E) Molecular surface representation of Group 1 of Echinococcus Ago and pocket binding miRNA. (F) Overview of conserved Group 1 structures and their domain architecture. (G) Relevant conserved and non-conserved amino acid residues of Echinococcus Ago proteins. (H) Cartoon representation of proteins from Group 1 of Echinococcus Ago: relevant and conserved residues involved in seed binding, mRNA and slicer activity are zoomed. (I) Cartoon representation of proteins from Group 2 of Echinococcus Ago: relevant and conserved residues involved in seed binding, mRNA and slicer activity are zoomed. (J) Cartoon representation of proteins from Group 4 of Echinococcus Ago: relevant and conserved residues involved in seed binding, mRNA and slicer activity are zoomed. (K) Sequence alignment of amino acid residues involved in seed binding region of the four groups of Echinococcus. (L) Table of sequence primers used for RT-qPCR. (PDF 304 kb)
Additional file 1: of Nursesâ   and pharmacistsâ   learning experiences from participating in interprofessional medication reviews for elderly in primary health care - a qualitative study
Creators: name: H. Bell
name: A. Granas
name: I. Enmarker
name: R. Omli
name: A. Steinsbekk
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: 20170203InterviewguidemanuscriptIMREndelig.docx, Interview guide. (DOCX 15Â kb)
Breast Cancer Chemoprevention by Vitamin D Plus Retinoids
Creators: name: University Of California Office Of The President
Publisher: name: University of California Office of the President
publisherIdentifier: https://ror.org/00dmfq477
publisherIdentifierScheme: ROR
Year: 2024

description: Vitamin D3 and the retinoic acid family (oxidized forms of vitamin A) inhibit the proliferation and growth of human breast cancer cells, including the vascularization process in tumors, which is necessary for the tumor to maintain its growth. Therefore, these compounds have outstanding potential as chemopreventative agents to inhibit the recurrence and spread of breast cancer, provided that their toxic side effects can be reduced. Preliminary breast cancer cell growth inhibition experiments indicate that combinations of these substances will permit lower effective doses than would be required if each agent were used alone. Therefore, side effects should be reduced. We will investigate the interactive molecular mechanisms of action of vitamin D3 and several different retinoids in inhibiting breast cancer cell growth and proliferation.

 Retinoids show a range of activity profiles that include such diverse effects on cancer cells as selectively inducing the synthesis of proteins involved in normal growth processes, inhibiting the synthesis of other proteins responsible for cell proliferation, and initiating the sequence of events that lead to tumor cell death. We propose to evaluate the effects of these retinoids alone and in combination with vitamin D3 on breast cancer cell growth under conditions in which cells become attached to surfaces (indicative of less likelihood of invading other tissues) and under conditions in which cells grow without the need for attachment (indicative of more invasive cancers). Our preliminary results indicate that both agents that mimic retinoid action and agents that block retinoid action inhibit the growth of cells under conditions requiring attachment, but that only agents that mimic retinoid action inhibit the growth of cells under conditions not requiring attachment. The growth of cells under these latter conditions correlates with their ability to grow as tumors and metastasize. We will also evaluate the effects of retinoids and vitamin D3 on breast cancer cell migration and invasion.

 To assess the effects at the molecular level, we will evaluate these retinoids alone and with vitamin D3 on the levels of two markers of cell proliferation, epidermal growth factor and the gene c-myc, which is over-active in cancer cells. Our ultimate goal is to devise new strategies for the chemoprevention of breast cancer, including the prevention of either its recurrence or its further progression.
Xenylla yucatana Mills 1938
Creators: name: Jantarit, Sopark
name: Bedos, Anne
name: Deharveng, Louis
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Entognatha
Collembola
Hypogastruridae
Xenylla
Xenylla yucatana

description: 18. Xenylla yucatana Mills, 1938
Source: Gama (1976), Bedos (1994).
Distribution in Thailand. Bangkok (C). Habitat: soil.
Distribution outside Thailand. Pan-tropical.
Remark. X. yucatana is often found in abundance on cave guano in Southeast Asia, but has not been reported so far from this habitat in Thailand.
description: Published as part of Jantarit, Sopark, Bedos, Anne & Deharveng, Louis, 2016, An annotated checklist of the Collembolan fauna of Thailand, pp. 301-360 in Zootaxa 4169 (2) on pages 309-310, DOI: 10.11646/zootaxa.4169.2.4, http://zenodo.org/record/265801
Hemiarius Bleeker 1862
Creators: name: Marceniuk, Alexandre Pires
name: Oliveira, Claudio
name: Ferraris Jr, Carl J.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Siluriformes
Ariidae
Hemiarius

description: Hemiarius Bleeker, 1862
MP 94, ML 91
(Figs 1–3, 30)
Type species: Cephalocassis stormii Bleeker, 1858.
Diagnosis
Parasphenoid very wide in ventral view (66, 0> 1); dorsal crest on premaxilla beginning between lateral one-third or one-half of anterior margin (124, 0> 1); dorsal crest of hyomandibula short and high (141, 0> 1); third basibranchial chalice shaped (168, 0> 1); transverse crest associated with neural spine of fourth vertebra very high (200, 0> 1); median crest associated with neural spine of fourth vertebra very high (202, 0> 1).
Ambiguous optimization: Mesethmoid median portion moderately wide (2, 0> 1); gas bladder lateral diverticula shallow, rounded bulges (244, 0> 1).
Included species
Hemiarius bleekeri Popta, 1900 * sedis mutabilis
Hemiarius hardenbergi Kailola, 2000 * sedis mutabilis
Hemiarius harmandi Sauvage, 1880 * sedis mutabilis
Hemiarius manillensis Valenciennes, 1840 * sedis mutabilis Hemiarius stormii Bleeker, 1858
Hemiarius sumatranus Anonymous, 1830
Hemiarius verrucosus Ng, 2003 * sedis mutabilis.
Habitat and distribution: Predominantly brackish waters, South and Southeast Asia (Fig. 24).
Remarks
The total-evidence analysis supports the monophyly of Hemiarius as observed in previous morphological studies (Marceniuk and Menezes 2007, Marceniuk et al. 2012). The inclusion of Hemiarius in the subtribe Ariina is supported by the MP and ML analyses.
description: Published as part of Marceniuk, Alexandre Pires, Oliveira, Claudio & Ferraris Jr, Carl J., 2024, A new classification of the family Ariidae (Osteichthyes: Ostariophysi: Siluriformes) based on combined analyses of morphological and molecular data, pp. 426-476 in Zoological Journal of the Linnean Society 200 (2) on page 457, DOI: 10.1093/zoolinnean/zlad078, http://zenodo.org/record/11240120
Il percorso Feltria-Ausucum (Itinerarium Antonini, 280, 7-8)
Creators: name: Salvador, Silvano
Publisher: name: Knowledge Commons
Year: 2025
Subjects: subject: Cartography

description: Concluding article on the Ab Opitergio Tridento route (Itinerarium Antonini, 280, 5-8, 281, 1), with the Feltria-Ausucum section
Additional file 3: Table S1. of Expression of enhancer of zeste homolog 2 correlates with survival outcome in patients with metastatic breast cancer: exploratory study using primary and paired metastatic lesions
Creators: name: Inari, Hitoshi
name: Suganuma, Nobuyasu
name: Kawachi, Kae
name: Yoshida, Tatsuya
name: Yamanaka, Takashi
name: Nakamura, Yoshiyasu
name: Yoshihara, Mitsuyo
name: Nakayama, Hirotaka
name: Yamanaka, Ayumi
name: Masudo, Katsuhiko
name: Oshima, Takashi
name: Yokose, Tomoyuki
name: Rino, Yasushi
name: Shimizu, Satoru
name: Miyagi, Yohei
name: Munetaka Masuda
Publisher: name: Figshare
Year: 2017
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: Science Policy

description: Univariate and multivariate analysis of prognostic factors related to overall survival after recurrence including Ki-67 expression. (DOC 111 kb)
MOESM1 of Predator cues reduce intraspecific trait variability in a marine dinoflagellate
Creators: name: Wohlrab, Sylke
name: Selander, Erik
name: U. John
Publisher: name: Figshare
Year: 2017
Subjects: subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Additional file 1. Information about the measured cell size distributions.
Hemipimelodus Bleeker 1857
Creators: name: Marceniuk, Alexandre Pires
name: Oliveira, Claudio
name: Ferraris Jr, Carl J.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Siluriformes
Ariidae
Hemipimelodus

description: Hemipimelodus Bleeker, 1857
(Figs 1–3, 31)
ZooBank registration: urn:lsid:zoobank.org:act: 84D53B59- 4ABB-4F76-B370-F9A510BB29F2.
Type species: Pimelodus borneensis Bleeker, 1851.
Diagnosis
Posterior branches of mesethmoid narrow (6, 0> 1); posterior branches of mesethmoid parallel along entire extension (7, 0> 1); fenestra delimited by lateral ethmoid and frontal very large (17, 1> 2); frontal mesial laminar projection absent (23, 1> 0); posterior cranial fontanel very wide and long (27, 1> 3); epiphyseal bar transversely elongate and longitudinally narrow (29, 0> 1); medial groove of cranium absent (30, 0> 1); fenestra delimited by parieto-supraoccipital, pterotic and sphenotic present (34, 0> 1); ventral crest of parieto-supraoccipital process well developed through entire extension of process (48, 0> 1); accessory tooth plates absent (58, 1> 0); optic foramen very reduced (67, 1> 2); ventral tip of subvertebral process spatulate (80, 2> 3); premaxilla narrow and very long, its length two to three times in width (120, 1> 2); ventral crest of hyomandibula absent (142, 0> 1); dorsal crest of urohyal projected anteriorly (156, 0> 1); anterior process of first hypobranchial inconspicuous (173, 1> 0); second hypobranchial transversely elongate, its mesial face acute (176, 0> 1); distal portion of uncinate process of third epibranchial acute (183, 1> 0); posterior margins of fourth epibranchial slightly convex, one-fourth as wide as long (187, 0> 1); median crest associated with neural spine of third vertebra very high (201, 0> 1); accessory crest connecting transverse and median crests associated with neural spine of fourth vertebra present (204, 0> 1); general aspect of superficial ventral ossification regularly arched (211, 0> 1); posterior process of cleithrum very short (224, 1> 0).
Ambiguous optimization: Frontal as main component of bony bridge formed by lateral ethmoid and frontal (15, 0> 2); third basibranchial hourglass shaped (168, 1> 0); transverse crest associated with neural spine of fourth vertebra low (200, 1> 0).
Included species
Hemipimelodus borneensis (Bleeker, 1851).
Habitat and distribution: Freshwater, South and Southeast Asia (Fig. 24).
Remarks
See Remarks of Cephalocassis.
description: Published as part of Marceniuk, Alexandre Pires, Oliveira, Claudio & Ferraris Jr, Carl J., 2024, A new classification of the family Ariidae (Osteichthyes: Ostariophysi: Siluriformes) based on combined analyses of morphological and molecular data, pp. 426-476 in Zoological Journal of the Linnean Society 200 (2) on page 458, DOI: 10.1093/zoolinnean/zlad078, http://zenodo.org/record/11240120
Xenylla
Creators: name: Jantarit, Sopark
name: Bedos, Anne
name: Deharveng, Louis
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Entognatha
Collembola
Hypogastruridae
Xenylla

description: Xenylla spp.
Source: Deharveng & Bedos (1988), Bedos (1994). Distribution in Thailand. Chumphon, Surat Thani (P). Habitat. Cave guano.
description: Published as part of Jantarit, Sopark, Bedos, Anne & Deharveng, Louis, 2016, An annotated checklist of the Collembolan fauna of Thailand, pp. 301-360 in Zootaxa 4169 (2) on page 310, DOI: 10.11646/zootaxa.4169.2.4, http://zenodo.org/record/265801
Andrena (Micrandrena) oedicnema Warncke 1975
Creators: name: Wood, Thomas J.
name: Ismael, Halgurd R.
name: Baiocchi, Daniele
name: Hamad, Mudhafar I.
name: Bapir, Tahseen T.
name: Selis, Marco
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Andrenidae
Andrena
Andrena oedicnema

description: 43.Andrena(Micrandrena)oedicnemaWarncke, 1975 *
Material examined.
Iraq: Duhok, Mt. Gara [S of Sarsing], 37.0158 ° N, 43.3506 ° E, 1912 m, 11. v. 2023, 2 ♂, leg. D. Baiocchi, MSVI;
Distribution.
Greece, Turkey, Israel and West Bank, Lebanon, Jordan, Syria, Turkey, Iraq *, Iran (Gusenleitner and Schwarz 2002; Pisanty et al. 2018; Wood and Monfared 2022).
description: Published as part of Wood, Thomas J., Ismael, Halgurd R., Baiocchi, Daniele, Hamad, Mudhafar I., Bapir, Tahseen T. & Selis, Marco, 2024, A first revision of the Andrena of Iraq (Hymenoptera, Andrenidae), with the description of two new species from Iraqi Kurdistan and additional records from surrounding countries, pp. 267-298 in ZooKeys 1205 on pages 267-298, DOI: 10.3897/zookeys.1205.120033
How to Realize an immersive Jedi Council Meeting - A Capturing Story of Holograms and Their Hyperdrive Delivery
Creators: name: De Fré, Matthias
name: van der Hooft, Jeroen
name: Wauters, Tim
name: De Turck, Filip
Publisher: name: Zenodo
Year: 2023

description: Holographic communication has been a common trope in sci-fi for the last couple of decades. While true holograms will take a while longer, the pursuit of comparable outcomes has manifested in the form of volumetric videos rendered in virtual reality environments. In these volumetric videos, real-life objects are represented in 3D by either a mesh or a point cloud. In stark contrast to conventional 2D videos, these volumetric counterparts allow for both positional and rotational movement which enable users to interact with each other and walk around in the scene. Consequently, this medium exhibits an immense promise for enabling or enhancing several forms of virtual communication, such as conferencing or digital concerts Nonetheless, this enhanced immersive experience comes at a cost. Raw volumetric videos have significant bandwidth requirements, making them unfeasible to use in a real-time interactive scenario. Compression has been used to reduce these requirements at the cost of introducing additional latency, thereby constraining the potential for seamless real-time interactions among participants. In addition, current volumetric video implementations utilize streaming technologies, such as low-latency DASH, which do not allow for real-time interaction due to their latency. In light of these challenges, we propose a point cloud-based end-to-end pipeline for one-to-many streaming scenarios. These point clouds are encoded using the Google Draco codec, effectively reducing the bandwidth to levels which are supported by current network infrastructures. In addition, we implemented a layered encoding strategy which samples the point cloud into three distinct layers, each sampled at a different rate. These layers allow us to perform quality adaptation for each user based on their position and a bandwidth estimate provided by the Google Congestion Control algorithm. Finally, we transmit the frame by utilizing WebRTC to ensure a significantly lower transport latency compared to current state-of-the-art point cloud streaming implementations.
Improving California wheat quality and nutritional value
Creators: name: University Of California Office Of The President
Publisher: name: University of California Office of the President
publisherIdentifier: https://ror.org/00dmfq477
publisherIdentifierScheme: ROR
Year: 2024

description: Bread and pasta wheat are important crops for California economy since they are grown on approximately 800,000 acres, providing an annual crop value of $300,000,000, which is then multiplied several times by the milling, baking and pasta industries. Wheat also provides a water use efficient crop for rotation with high value crops. This project will use non-transgenic biotechnological approaches to increase the value of the California wheat crop by introgressing favorable quality and nutritional traits. These are complex traits and their improvement requires integrated approaches that tackle simultaneously several components of the wheat grain. In this project we will use molecular markers to combine induced and natural mutations that increase the proportion of wheat resistant starch and improve dietary fiber, decrease cadmium concentration in pasta wheat to acceptable international regulatory levels, and improve wheat value by increasing the quantity and quality of grain protein. The incorporation of the high grain protein content gene Gpc-B1, recently cloned by our laboratory, results in a more efficient remobilization of nitrogen, zinc and iron from the leaves to the wheat grains, and therefore, similar levels of grain protein can be achieved with reduced levels of nitrogen fertilization. The incorporation of this gene into pasta wheat will be used to expand the durum growing areas to the northern San Joaquin and Sacramento valleys were durum production was not possible before due to inadequate levels of grain protein content. In addition to improvements in grain protein quantity we will improve bread and pasta protein quality by introducing novel gene variants associated with increased gluten strength. During this project, we will characterize new mapping populations including a bread wheat variety with exceptionally high levels of grain protein content to discover new chromosome regions affecting this important trait. The different favorable traits affecting grain starch, protein and micronutrients described before will be incorporated and combined into bread and pasta wheat varieties and breeding lines using marker assisted selection. The quality and agronomic performance of the improved germplasm will be tested in multiple locations across California to evaluate the effect of the environment on the different quality and nutritional traits and the best lines will be released as public varieties that will benefit both California wheat growers and end users.
Additional file 4: of Conserved patterns of integrated developmental plasticity in a group of polyphenic tropical butterflies
Creators: name: Bergen, Erik Van
name: Osbaldeston, Dave
name: Ullasa Kodandaramaiah
name: BrattstrĂśm, Oskar
name: Kwaku Aduse-Poku
name: Brakefield, Paul
Publisher: name: Figshare
Year: 2017
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Reaction norm graphs and minimum adequate models for all wing pattern elements. (PDF 1359Â kb)
Friesea Dalla Torre
Creators: name: Jantarit, Sopark
name: Bedos, Anne
name: Deharveng, Louis
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Entognatha
Collembola
Neanuridae
Friesea

description: Genus Friesea Dalla Torre
Remark. Friesea sp.1 to 6 cited from above 2000 m in Doi Inthanon without further details in Deharveng et al. (1989) correspond to species that were subsequently described and are listed below, but exact match cannot be established.
description: Published as part of Jantarit, Sopark, Bedos, Anne & Deharveng, Louis, 2016, An annotated checklist of the Collembolan fauna of Thailand, pp. 301-360 in Zootaxa 4169 (2) on page 310, DOI: 10.11646/zootaxa.4169.2.4, http://zenodo.org/record/265801
Hexanematichthys Bleeker 1858
Creators: name: Marceniuk, Alexandre Pires
name: Oliveira, Claudio
name: Ferraris Jr, Carl J.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Siluriformes
Ariidae
Hexanematichthys

description: Hexanematichthys Bleeker, 1858
(Figs 1–3, 24D, 32)
Type species: Bagrus sondaicus Valenciennes, 1840.
Diagnosis
Posterior branches of mesethmoid moderately long, delimiting between one-fourth and one-half of length of anterior cranial fontanel (8, 0> 1); posterior branch of lateral ethmoid depressed (13, 0> 1); posterior cranial fontanel absent (26, 1> 0); epiphyseal bar indistinct (28, 0> 1); temporal fossa absent (38, 0> 1); accessory tooth plates small, oval to rounded (60, 2> 1); lateral margins of orbitosphenoid progressively diverging anteriorly (63, 0> 1); autopalatine posterior portion conspicuously compressed (106, 0> 1); articulation of autopalatine with lateral ethmoid mesoposteriorly oriented (110, 0> 1); lateral and mesial portions of premaxilla with different sizes (121, 0> 1); anteroventral portion of opercle subtrapezoidal, very long (127, 1> 0); Müllerian ramus distal third markedly curved (208, 1> 2).
Ambiguous optimization: Exoccipital bony crest perpendicular to vertebral column and ventrolaterally directed (92, 1> 0); 15 or more ribs (213, 0> 1); second dorsal cleithral process posteriorly directed and parallel to posterior process (226, 1> 0).
Included species
Hexanematichthys sagor Hamilton, 1822.
Habitat and distribution: Brackish and marine waters, South and Southeast Asia (Fig. 24).
Remarks
The total-evidence analysis supports the validity of Hexanematichthys, corroborating the result of a previous molecular study (Betancur-R. 2009) that reveals a strong morphological convergence between Hexanematichthys and Sciades (characters 26, 28, 93, 106, and 110), which had resulted in them having previously been treated as synonyms (Marceniuk et al. 2012).
description: Published as part of Marceniuk, Alexandre Pires, Oliveira, Claudio & Ferraris Jr, Carl J., 2024, A new classification of the family Ariidae (Osteichthyes: Ostariophysi: Siluriformes) based on combined analyses of morphological and molecular data, pp. 426-476 in Zoological Journal of the Linnean Society 200 (2) on pages 458-459, DOI: 10.1093/zoolinnean/zlad078, http://zenodo.org/record/11240120
Additional file 4: of The Echinococcus canadensis (G7) genome: a key knowledge of parasitic platyhelminth human diseases
Creators: name: Maldonado, Lucas
name: Assis, Juliana
name: Araújo, Flávio
name: Salim, Anna
name: Macchiaroli, Natalia
name: Cucher, Marcela
name: Camicia, Federico
name: Fox, Adolfo
name: Rosenzvit, Mara
name: Oliveira, Guilherme
name: Kamenetzky, Laura
Publisher: name: Figshare
Year: 2017
Subjects: subject: Biochemistry
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Evolutionary Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Expanded proteins families and drug targets: Multiple alignment of expanded proteins families and drug target sequences of E. canadensis (G7) and their orthologs. (PDF 999 kb)
Probabilistic Algorithms for New Computer Architectures
Creators: name: University Of California Office Of The President
Publisher: name: University of California Office of the President
publisherIdentifier: https://ror.org/00dmfq477
publisherIdentifierScheme: ROR
Year: 2024

description: The national laboratories are engaged in a push to exascale computing. The power, reliability and data challenges will force a non-evolutionary path to this goal, and even those systems not aimed at exaflops will use new exascale technology. With the advent of new architectures, a rethinking of conventional computational approaches will be needed to properly exploit new features. We propose to explore probabilistic techniques and algorithms for use on newer architectures including GPUs and possibly data-intensive supercomputing systems. We will target algorithms supporting the large-scale scientific problems that are part of LANL's mission. Concepts in probabilistic computation date back to the early days of computing, and are in use at Google and in the intelligence analysis community. However, these ideas have not been exploited nearly as much in the HPC community. Benefits may include such things as increased efficiency of calculation, increased algorithmic resilience, and better exploitation of new architectural features. These techniques could also influence co-design efforts over the next ten years as exascale systems are designed. We have seen early success in the use of a probabilistic Las Vegas algorithm for the classical selection problem on the GPU. Las Vegas algorithms are a form of stochastic optimization and can be well suited to more general parallel processors with limited amounts of fast memory. For problems with a quantifiable and efficiently checkable randomized way to guess an answer, this approach may be much more efficient than a direct calculation.
Friesea chiangdaoensis Deharveng & Bedos 1991
Creators: name: Jantarit, Sopark
name: Bedos, Anne
name: Deharveng, Louis
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Entognatha
Collembola
Neanuridae
Friesea
Friesea chiangdaoensis

description: 19. Friesea chiangdaoensis Deharveng & Bedos, 1991
Source: Deharveng & Bedos (1991), Bedos (1994), Rojanavongse et al. (unpublished report). Type deposition: LEITT.
Distribution in Thailand. Chiang Mai (N). Habitat: litter at 1700–2000 m. in Doi Chiang Dao. Distribution outside Thailand. Only known from Thailand (Doi Chiang Dao).
description: Published as part of Jantarit, Sopark, Bedos, Anne & Deharveng, Louis, 2016, An annotated checklist of the Collembolan fauna of Thailand, pp. 301-360 in Zootaxa 4169 (2) on page 310, DOI: 10.11646/zootaxa.4169.2.4, http://zenodo.org/record/265801
Anomaly Detection in Streaming Radio Interferometer Data
Creators: name: University Of California Office Of The President
Publisher: name: University of California Office of the President
publisherIdentifier: https://ror.org/00dmfq477
publisherIdentifierScheme: ROR
Year: 2024

description: Recent growth in computational power has led to an explosion of data in radio astronomy. Whether this growth in data is seen as a blessing or a curse depends largely on the tools available to extract science. We have pioneered a new technique to extract millisecond transients from the massive data stream associated with radio interferometers. This technique can robustly detect and localize impulsive bursts of electromagnetic radiation from sources such as neutron stars and exoplanets. Importantly, this technique is computationally efficient, which makes it possible to implement in software for real-time, all-time transient detection. Radio frequency interference (RFI), however, can significantly corrupt radio transient capabilities. LANL expertise in statistics and algorithms for RFI mitigation, as demonstrated in past collaborations with UC at the Allen Telescope Array, can significantly improve the efficiency and robustness of this algorithm. We propose implementing this algorithm at the EVLA, the most powerful radio telescope in existence. The proposal will take a multi-step approach beginning with offline tests on recorded data followed, ultimately, by a EVLA implementation for real-time radio transient detection. The full implementation of this system will search every EVLA observation for millisecond transients and localize them to arcsecond precision, providing a fundamentally new capability for general use. This unique facility will search an unprecedented volume of data, which will transform the study of neutron star transients, the interstellar and intergalactic media, exoplanets, and other exotic phenomena.
Friesea claviseta Axelson 1900
Creators: name: Jantarit, Sopark
name: Bedos, Anne
name: Deharveng, Louis
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Entognatha
Collembola
Neanuridae
Friesea
Friesea claviseta

description: 20. Friesea cf. claviseta Axelson, 1900
Source: Deharveng & Bedos (1991), Bedos (1994), Rojanavongse et al. (unpublished report). Distribution in Thailand. Chiang Mai (N). Habitat: litter at 1300 m. in forest. Distribution outside Thailand. F. claviseta is cosmopolitan.
description: Published as part of Jantarit, Sopark, Bedos, Anne & Deharveng, Louis, 2016, An annotated checklist of the Collembolan fauna of Thailand, pp. 301-360 in Zootaxa 4169 (2) on page 310, DOI: 10.11646/zootaxa.4169.2.4, http://zenodo.org/record/265801
Andrena (Pallandrena) pallidicincta Brulle 1832
Creators: name: Wood, Thomas J.
name: Ismael, Halgurd R.
name: Baiocchi, Daniele
name: Hamad, Mudhafar I.
name: Bapir, Tahseen T.
name: Selis, Marco
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Andrenidae
Andrena
Andrena pallidicincta

description: 44.Andrena(Pallandrena)pallidicinctaBrullé, 1832 *
Material examined.
Iraq: Duhok, Mt. Gara [S of Sarsing], 37.0158 ° N, 43.3506 ° E, 1912 m, 11. v. 2023, 11 ♀, leg. D. Baiocchi, MSVI / TJWC.
Distribution.
South-eastern Europe to Turkey, Lebanon, Israel, and Iraq * (Gusenleitner and Schwarz 2002; Wood et al. 2020).
description: Published as part of Wood, Thomas J., Ismael, Halgurd R., Baiocchi, Daniele, Hamad, Mudhafar I., Bapir, Tahseen T. & Selis, Marco, 2024, A first revision of the Andrena of Iraq (Hymenoptera, Andrenidae), with the description of two new species from Iraqi Kurdistan and additional records from surrounding countries, pp. 267-298 in ZooKeys 1205 on pages 267-298, DOI: 10.3897/zookeys.1205.120033
Additional file 1: of TREatment of ATopic eczema (TREAT) Registry Taskforce: protocol for an international Delphi exercise to identify a core set of domains and domain items for national atopic eczema registries
Creators: name: Gerbens, Louise
name: Boyce, Aaron
name: Wall, Dmitri
name: Barbarot, Sebastien
name: Booij, Richard
name: Deleuran, Mette
name: Middelkamp-Hup, Maritza
name: Roberts, Amanda
name: Vestergaard, Christian
name: Weidinger, Stephan
name: Apfelbacher, Christian
name: Irvine, Alan
name: Schmitt, Jochen
name: Williamson, Paula
name: Spuls, Phyllis
name: Flohr, Carsten
Publisher: name: Figshare
Year: 2017
Subjects: subject: Medicine
subject: Cell Biology
subject: Sociology
subject: FOS: Sociology
subject: Developmental Biology
subject: Science Policy
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: SPIRIT 2013 Checklist: recommended items to address in a clinical trial protocol and related documents. (PDF 199 kb)
Jayaramichthys Marceniuk & Oliveira & Ferraris Jr 2024, gen. nov.
Creators: name: Marceniuk, Alexandre Pires
name: Oliveira, Claudio
name: Ferraris Jr, Carl J.
Publisher: name: Zenodo
Year: 2023
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Siluriformes
Ariidae
Jayaramichthys

description: Jayaramichthys gen. nov.
(Figs 1–3, 33)
ZooBank registration: urn:lsid:zoobank.org:act: 84D53B59- 4ABB-4F76-B370-F9A510BB29F2.
Type species: Arius leptonotacanthus Bleeker, 1849.
Diagnosis
Bony bridge formed by lateral ethmoid and frontal equally represented (15, 0> 1); accessory tooth plates large, longitudinally elongate (60, 3> 4); face for articulation of transcapular process with basioccipital large and depressed (85, 0> 1); transcapular process at right angle to body axis (86, 0> 1); transcapular process depressed (88, 0> 1); bony blade connecting posterolateral processes of urohyal absent (159, 0> 1); median crest associated with neural spine of fourth vertebra very high (202, 0> 1). Ambiguous optimization: Space between transcapular process and otic capsule very small (89, 1> 2); contact area between interopercle and opercle no more than one-half of interopercle posterior face (131, 1> 0).
Etymology
Named for the Indian ichthyologist Kottore Chidambaram Jayaram (1926–2011) who contributed greatly to our understanding of the taxonomy, evolution, and biogeography of ariids from the Indian subcontinent. Gender: masculine.
Included species
Jayaramichthys leptonotacanthus Bleeker, 1849.
Habitat and distribution: Brackish and marine waters, Southeast Asia (Fig. 24).
Remarks
Jayaramichthys is established to accommodate Jayaramichthys leptonotacanthus, not examined in a previous morphological study (Marceniuk etal. 2012),buttreatedasvalid(as Ariusleptonotacanthus) in a previous molecular study in Betancur-R.(2009).
description: Published as part of Marceniuk, Alexandre Pires, Oliveira, Claudio & Ferraris Jr, Carl J., 2024, A new classification of the family Ariidae (Osteichthyes: Ostariophysi: Siluriformes) based on combined analyses of morphological and molecular data, pp. 426-476 in Zoological Journal of the Linnean Society 200 (2) on pages 459-460, DOI: 10.1093/zoolinnean/zlad078, http://zenodo.org/record/11240120