cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 8: of TFAP2C promotes stemness and chemotherapeutic resistance in colorectal cancer via inactivating hippo signaling pathway
Creators: name: Wang, Xu
name: Sun, Di
name: Tai, Jiandong
name: Chen, Si
name: Yu, Miao
name: Ren, Dong
name: Wang, Lei
Publisher: name: figshare
Year: 2018
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer

description: Figure S3. Overexpression of TFAP2C is associated with poor chemotherapy response. (A and B) TFAP2C expression levels were much higher in CRC patients with poor chemotherapy response as assessed by analyzing the TCGA and GSE28702 CRC RNA sequencing datasets. (C) Percentages and number of samples showed high or low TFAP2C expression in CRC patients with different chemotherapy response in our CRC tissues. (D) Apoptotic ratio of CRC cells under treatment of 5-FU (20Îźm). (E and F) The correlation of TFAP2C mRNA (E) and protein (F) expression levels with apoptotic ratio in CRC cells after treated with 20Îźm 5-FU. (PDF 166Â kb)
Rethinking Our Approach: Bringing Creativity to EBM through Gaming
Creators: name: Jamie. M. Gray
name: Capdarest-Arest, Nicole
Publisher: name: figshare
Year: 2017
Subjects: subject: Library and Information Studies
subject: FOS: Media and communications
subject: 130103 Higher Education
subject: FOS: Educational sciences

description: Presentation & paper available at:
https://informationonline.alia.org.au/content/rethinking-our-approach-bringing-creativity-ebm-through-gaming-0
Additional file 9: of TFAP2C promotes stemness and chemotherapeutic resistance in colorectal cancer via inactivating hippo signaling pathway
Creators: name: Wang, Xu
name: Sun, Di
name: Tai, Jiandong
name: Chen, Si
name: Yu, Miao
name: Ren, Dong
name: Wang, Lei
Publisher: name: figshare
Year: 2018
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Chemical Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Figure S4. Silencing TFAP2C inhibits proliferation ability of CRC cells. (A and B) Real-time PCR and Western blot of the indicated CRC cells transfected with TFAP2C -vector, TFAP2C, TFAP2C -RNAi-vector, TFAP2C -RNAi#1 and TFAP2C -RNAi#2. GAPDH was used as endogenous controls in RT-PCR and α-Tubulin was detected as a loading control in the Western blot. Each bar represents the mean values ± SD of three independent experiments. *P < 0.05. (C) CCK-8 assay revealed that silencing TFAP2C decreased the proliferation rate in CRC cells. Each bar represents the mean values ± SD of three independent experiments. *P < 0.05. (D) downregulation of endogenous TFAP2C reduced, the mean colony number in the colony formation assay. Each bar represents the mean values ± SD of three independent experiments. *P < 0.05. (E) Representative micrographs and colony numbers in the indicated group in the anchorage-independent growth assay. Each bar represents the mean values ± SD of three independent experiments. *P < 0.05. (PDF 167 kb)
Study selection
Creators: name: Campbell, Wenonah
name: Grandisson, Marie
name: Phoenix, Michelle
name: Gagnon, Martine
name: Zwicker, Jill
name: Desmarais, Chantal
name: Morales, Ernesto
name: Mortenson, Ben
name: Marie-Eve Lamontagne
name: Routhier, François
name: Lettre, Josiane
name: Julien-Gauthier, Francine
name: Field, Debbie
Publisher: name: OSF Registries
Year: 2023

description: Two reviewers will independently examine the titles and abstracts of all studies identified through the databases search. A study will be excluded if the information provided in the title and abstract clearly does not meet the selection criteria predetermined with the librarian. The remaining articles will then be read in their entirety. At each stage, the two reviewers will compare their decisions and any discrepancies will be discussed. If the disagreement cannot be resolved by consensus, a third reviewer will be consulted. To prevent errors and reduce the risk of discrepancies between the two reviewers, the screening phase will start with a calibration exercise. The reference lists of the selected studies will be checked to identify other studies meeting the inclusion criteria.
Data-Intensive Analysis for High Energy Physics (DIANA/HEP)
Creators: name: Elmer, Peter
name: Sokoloff, Mike
name: Bockelman, Brian
name: Cranmer, Kyle
Publisher: name: figshare
Year: 2017
Subjects: subject: Computational Physics
subject: 20202 Nuclear Physics
subject: FOS: Physical sciences
subject: 20203 Particle Physics

description: DIANA/HEP poster for NSF SI2 PI workshop 2017
title: Spondylolyse et spondylolisthesis. Prise en charge chirurgicale.
Creators: name: SALES DE GAUZY, J.
name: COMPAGNON, R.
name: BOLZINGER, M.
Publisher: name: Association Française d'Etudes et de Recherches sur les Aérosols (ASFERA)
Year: 2020
Subjects: subject: Spondylolisthésis
subject: enfant
subject: chirurgie

description: Le traitement chirurgical est rarement indiqué dans la spondylolyse et le spondylolisthesis de l’enfant et de l’adolescent si l’on tient compte de la fréquence de ces 2 entités dans la population normale. L’abstention thérapeutique ou le traitement conservateur sont beaucoup plus fréquents. Nous nous focaliserons sur la localisation L5-S1 qui est de très loin la plus fréquente. De nombreuses techniques chirurgicales ont été décrites. Le choix reste toujours actuellement controversé à la fois pour les spondylolisthesis de bas grade et pour les spondylolisthesis de haut grade. Nous présenterons les différentes techniques, leurs résultats et les complications. Nous terminerons par une proposition stratégies à adopter en fonction du type de spondylolisthesis en tenant compte notamment de l’importance du glissement et de sa stabilité.
title: Cyphose de Scheuermann, Etiologie - Diagnostic
Creators: name: WICART, P.
Publisher: name: Société Française d’Orthopédie Pédiatrique (SOFOP)
Year: 2020
Subjects: subject: Scheuermann
subject: Etiologie
subject: adolescent

description: Voici presqu’un siècle que Holger Scheuermann a décrit une cyphose caractérisée par une cunéiformisation des corps vertébraux à base postérieure avec irrégularité caractéristique des plateaux vertébraux. Les premiers signes apparaissent avec le début du pic de croissance pubertaire. Aucun signe radiologique n’a été rapporté avant l’âge de 10 ans. Cette anomalie affecte de 0,4 à 10% des adolescents âgés entre 10 et 14 ans. Si l’on considère des irrégularités d’ossification des plateaux vertébraux mineures, la fréquence peut s’élever à 40%.
In-plane Thermal Conductivity Measurement with Nanosecond Grating Imaging Technique
Creators: name: Jeong, Jihoon
name: Chen, Ke
name: Walker, Emily S.
name: Roy, Nilabh
name: He, Feng
name: Liu, Philip
name: Willson, C. Grant
name: Cullinan, Michael
name: Bank, Seth R.
name: Wang, Yaguo
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Biochemistry
subject: Space Science
subject: Physical Sciences not elsewhere classified
subject: Cell Biology
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: FOS: Biological sciences
subject: Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Hematology

description: We develop a nanosecond grating imaging (NGI) technique to measure in-plane thermal transport properties in bulk and thin-film samples. Based on nanosecond time-domain thermoreflectance (ns-TDTR), NGI incorporates a photomask with periodic metal strips patterned on a transparent dielectric substrate to generate grating images of pump and probe lasers on the sample surface, which induces heat conduction along both cross- and in-plane directions. Analytical and numerical models have been developed to extract thermal conductivities in both bulk and thin-film samples from NGI measurements. This newly developed technique is used to determine thickness-dependent in-plane thermal conductivities (κx) in Cu nano-films, which agree well with the electron thermal conductivity values converted from four-point electrical conductivity measurements using the Wiedemamn–Franz law, as well as previously reported experimental values. The κx measured with NGI in an 8 nm x 8 nm GaAs/AlAs superlattice (SL) is about 10.2 W/m⋅K, larger than the cross-plane thermal conductivity (8.8 W/m⋅K), indicating the anisotropic thermal transport in the SL structure. The uncertainty of the measured κx is about 25% in the Cu film and less than 5% in SL. Sensitivity analysis suggests that, with the careful selection of proper substrate and interface resistance, the uncertainty of κx in Cu nano-films can be as low as 5%, showing the potential of the NGI technique to determine κx in thin films with improved accuracy. By simply installing a photomask into ns-TDTR, NGI provides a convenient, fast, and cost-effective method to measure the in-plane thermal conductivities in a wide range of structures and materials.
D2.1 Libraries and tools for multimodal content analysis
Creators: name: Doukhan; David
name: Francis, Danny
name: Huet, Benoit
name: Keronen, Sami
name: Kurimo, Mikko
name: Laaksonen, Jorma
name: Lindh-Knuutila, Tiina
name: Merialdo, Bernard
name: Sjöberg, Mats
name: Sulubacak, Umut
name: Tiedemann, Jörg
name: Viljanen, Kim
Publisher: name: Zenodo
Year: 2018
Subjects: media content analysis
multimodal data analysis

description: This deliverable describes a joint collection of libraries and tools for multimodal content analysis created by the MeMAD project partners. These tools have been further improved and developed during the first year of the project. The description of the components is divided into the visual and auditory domain, and these are further subdivided into differ- ent themes. As part of this deliverable, the open source components have been gathered into a joint software collection of tools and libraries publicly available on GitHub. Finally, five scientific publications are appended to the report, which describe the technological advances related to these components that has been made so far in the project.
Impact of channel power and fairness concern on supplier’s market entry decision
Creators: name: Niu, Baozhuang
name: Cui, Qinquan
name: Zhang, Jie
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Biochemistry
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Sociology
subject: FOS: Sociology
subject: Science Policy

description: In a two-stage supply chain comprising a supplier and a retailer, we incorporate the concepts of channel power and fairness concern to analyze the supplier’s decision on whether to open an online direct channel or not. With an online channel, the supplier competes with its retailer in a dual-channel system, but the retailer may shift part or all orders to another supplier as the counteraction. Otherwise, the supplier only obtains the wholesaling profit but loses that from the online market. Taking the retail prices and the quality of the online product as decision variables, we show that the introduction of a direct channel leads to the decline of online product’s quality and retail price. Interestingly, we find that the retailer’s profit may be decreasing in its channel power. Comparing the outcomes with those from pure competing channels, we find that the retailer’s order shifting strategy may result in a lose–lose situation for the two firms, but it can be a credible threat to the supplier’s market entry. We also find that the supplier’s fairness concern may effectively reduce its incentives to open an online channel.
Interactive 3D PDF model of Latimeria chalumnae oesophagus and vestigial lung. Three-dimensional reconstruction of the lung and oesophagus of the adult specimen CCC 28. Yellow, oesophagus; red, vestigial lung. from Lung anatomy and histology of the extant coelacanth shed light on the loss of air-breathing during deep-water adaptation in actinistians
Creators: name: Cupello, Camila
name: Meunier, François J.
name: Herbin, Marc
name: Clément, Gaël
name: Brito, Paulo M.
Publisher: name: The Royal Society
Year: 2017
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Developmental Biology

description: Lungs are specialized organs that originated from the posterior pharyngeal cavity and considered as plesiomorphic for osteichthyans, as they are found in extant basal actinopterygians (i.e. Polypterus) and in all major groups of extant sarcopterygians. The presence of a vestigial lung in adult stages of the extant coelacanth Latimeria chalumnae is the result of allometric growth during ontogeny, in relation with deep times adaptation to deep water. Here, we present the first detailed histological and anatomical description of the lung of Latimeria chalumnae, providing new insights into its arrested differentiation in an air-breathing complex, mainly represented by the absence of pneumocytes and of compartmentalization in the latest ontogenetic stages.
Optimal advertising/ordering policy and finance mode selection for a capital-constrained retailer with stochastic demand
Creators: name: Zhou, Yong-Wu
name: Cao, Bin
name: Zhong, Yuanguang
name: Wu, Yongzhong
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Medicine
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Ecology
subject: FOS: Biological sciences
subject: Information Systems not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy
subject: Computational Biology

description: In this paper, we discuss how a capital-constrained retailer determines his optimal advertising/ordering policy and selects his financing mode when he faces the following modes: no financing service, bank financing, and supplier/mixed financing. For each mode, we construct an optimization model and present a method for how the retailer determines his corresponding optimal advertising and ordering policies in the terms of his initial capital level. Furthermore, we derive the conditions of retailer selecting the optimal financing mode based on both his initial capital level and the interest rates of the financing services. We show that when the retailer is relatively “poor,” he prefers bank financing mode if the bank interest rate is lower than the supplier, otherwise mixed financing mode; when he is moderately “rich,” he only selects supplier financing mode if the bank interest rate is greater than a threshold value and otherwise bank financing mode; however, when he is relatively “rich,” he always chooses bank financing mode even if the bank interest rate is higher than the supplier. We conduct numerical studies to illustrate the theoretical results and find adopting financing service significantly improves the retailer’s performance especially when he has relatively low initial capital level.
Additional file 1: of Use of esophageal balloon pressure-volume curve analysis to determine esophageal wall elastance and calibrate raw esophageal pressure: a bench experiment and clinical study
Creators: name: Sun, Xiu-Mei
name: Chen, Guang-Qiang
name: Huang, Hua-Wei
name: He, Xuan
name: Yang, Yan-Lin
name: Shi, Zhong-Hua
name: Xu, Ming
name: Zhou, Jian-Xin
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Information Systems not elsewhere classified

description: Detailed methods in the bench experiment and clinical study. (PDF 110Â kb)
title: Diagnostic radiologique des lésions ménisco-ligamentaires du genou chez l'enfant
Creators: name: PANUEL, M.
name: DESVIGNES, C.
name: CHAUMOITRE, K.
name: PETIT, P.
Publisher: name: Société Française d’Orthopédie Pédiatrique (SOFOP)
Year: 2020
Subjects: subject: enfant
subject: imagerie
subject: ménisque

description: Les traumatismes du genou de l’enfant et l’adolescent sont un motif de consultation fréquent en orthopédie pédiatrique. Les accidents lors de la pratique de sports dominent largement ceux de la voie publique. Les lésions habituelles concernent les fractures (contusions, lésions du cartilage de croissance, lésions ostéochondrales), les lésions de l’appareil extenseur et les lésions méniscales et/ou ligamentaires. Seront envisagés dans ce chapitre les moyens d’imagerie et la séméiologie des lésions méniscales et ligamentaires.
title: Overuse injuries » chez l’enfant
Creators: name: COURVOISIER, A.
Publisher: name: Société Française d’Orthopédie Pédiatrique (SOFOP)
Year: 2020
Subjects: subject: hypersollocitation
subject: overuse
subject: enfant

description: Classiquement, la définition d’une lésion d’hypersollicitation est une lésion chronique conséquence d’un niveau de contrainte physiologique exercée sur le système musculo-squelettique sans un temps de repos suffisant. Le degré d’hypersollicitation ne peut donc pas être défini de manière précise pour l’ensemble d’une population d’enfants. Il est fondamental de connaitre ces manifestations qui sont en augmentation et qui sont souvent négligées et banalisées sous l’étiquette des « douleurs de croissance ». Or, la croissance ne fait pas mal, il s’agit bien de véritables troubles musculo-squelettiques responsables de douleurs parfois très invalidantes chez les enfants, et particulièrement pendant le pic de croissance pubertaire ou la croissance des membres inférieurs est très rapide et le système musculo-squelettique dans sa globalité est très sollicité.
Additional file 2: of Use of esophageal balloon pressure-volume curve analysis to determine esophageal wall elastance and calibrate raw esophageal pressure: a bench experiment and clinical study
Creators: name: Sun, Xiu-Mei
name: Chen, Guang-Qiang
name: Huang, Hua-Wei
name: He, Xuan
name: Yang, Yan-Lin
name: Shi, Zhong-Hua
name: Xu, Ming
name: Zhou, Jian-Xin
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified

description: Detailed results in the bench experiment. (PDF 110Â kb)
Supplementary methods (libraries preparation and analysis of RAD-Sequencing and real-time PCR protocol) from Evidence for a genetic sex determination in Cnidaria, the Mediterranean red coral (Corallium rubrum)
Creators: name: M. Pratlong
name: A. Haguenauer
name: S. Chenesseau
name: K. Brener
name: G. Mitta
name: E. Toulza
name: M. Bonabaud
name: S. Rialle
name: D. Aurelle
name: P. Pontarotti
Publisher: name: The Royal Society
Year: 2017
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Ecology
subject: 60408 Genomics

description: Sexual reproduction is widespread among eukaryotes, and the sex-determining processes vary greatly among species. While genetic sex determination (GSD) has been intensively described in bilaterian species, no example has yet been recorded among non-bilaterians. However, the quasi-ubiquitous repartition of GSD among multicellular species suggests that similar evolutionary forces can promote this system, and that these forces could occur also in non-bilaterians. Studying sex determination across the range of Metazoan diversity is indeed important to understand better the evolution of this mechanism and its lability. We tested the existence of sex-linked genes in the gonochoric red coral (Corallium rubrum, Cnidaria) using Restriction site-Associated DNA sequencing (RAD-Seq). We analysed 27 461 single nucleotide polymorphisms (SNPs) in 354 individuals from 12 populations including 53 that were morphologically sexed. We found a strong association between the allele frequencies of 472 SNPs and the sex of individuals, suggesting an XX/XY sex-determination system. This result was confirmed by the identification of 435 male-specific loci. An independent test confirmed that the amplification of these loci enabled us to identify males with absolute certainty. This is the first demonstration of a GSD system among non-bilaterian species and a new example of its convergence in multicellular eukaryotes.
Selection criteria
Creators: name: Campbell, Wenonah
name: Grandisson, Marie
name: Phoenix, Michelle
name: Gagnon, Martine
name: Zwicker, Jill
name: Morales, Ernesto
name: Desmarais, Chantal
name: Mortenson, Ben
name: Marie-Eve Lamontagne
name: Routhier, François
name: Lettre, Josiane
name: Julien-Gauthier, Francine
name: Field, Debbie
Publisher: name: OSF Registries
Year: 2023

description: Literature that meets the criteria listed in the attached file will be included in our scoping review. Inclusion and exclusion criteria are classified according to the following categories, based on the PICOS structured approach: 1) population and setting, 2) intervention and outcome, 3) study design, 4) source, and 5) language. No restriction will be applied regarding year of publication.
title: Academic contribution to collective building of the city – An experience in the countryside of Ceará – Brazil
Creators: name: Okretic, Gabrielle
name: Mudo, Eloise
name: Viana, Franklin
name: Adrião, Yara
name: Manuel, Adilson
name: Mendes, Brenda
name: Holanda, Virginia
name: Farias, Cicera
Publisher: name: Conference Proceedings XXIX International Seminar on Urban Form ISUF 2022 Urban Redevelopment and Revitalisation A Multidisciplinary Perspective/Lodz University of Technology Press
Year: 2023
Subjects: Collective construction of the city, The social role of the university, Popular participation.

description: The appropriation of space is directly linked to the sense of belonging and identity of the place and with place. When the population participates in the planning process, the way of appropriation of the public space is differentiated and much more effective. Based on this assumption, the research group Collaborative Urbanism – UrbColab, linked to the Research Center in Architecture, City and Technology – NuPACT, aims to foster discussion about aspects of daily life that influence the collective construction of the city, more specifically in the small and medium-sized cities of Ceará (Brazil), promoting a dialogical relationship between academia, society and the public power. By working horizontally and inclusively, we make room for the demands that appear and that is in line with the group’s proposal. Among them, as a partial result, we are consolidating three work fronts that emerged as demands: technical assistance in the preparation of the Carnaubal Master Plan; creation of proposals for the revision of the Sobral Master Plan and; training cycle for the preparation of Participatory Master Plans. This article aims to show the importance of academic engagement in the discussions of the city as a way to disseminate knowledge and be able to act effectively in the construction of more dignified and inclusive cities.
Additional file 3: of Use of esophageal balloon pressure-volume curve analysis to determine esophageal wall elastance and calibrate raw esophageal pressure: a bench experiment and clinical study
Creators: name: Sun, Xiu-Mei
name: Chen, Guang-Qiang
name: Huang, Hua-Wei
name: He, Xuan
name: Yang, Yan-Lin
name: Shi, Zhong-Hua
name: Xu, Ming
name: Zhou, Jian-Xin
Publisher: name: figshare
Year: 2018
Subjects: Biophysics
Space Science
Physical Sciences not elsewhere classified
Medicine
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Information Systems not elsewhere classified

description: Figure S1. Example balloon P-V curves at atmospheric pressure and different levels of chamber elastance. (PDF 468Â kb)
UNIFICATION PROCESS AND BROKEN HOMES: A PERSPECTIVE FROM THE CANADIAN SOCIAL CARE SYSTEM
Creators: name: Rosemond Owusu Nyarko, B.A, MSW, RSW
name: James Yamoah, Ph.D*
name: Richard Owusu Nyarko, M.D, Ph.D*
name: Grace Ama  Ampong, M.A, MPA
name: Paul Owusu Boateng, MB BS, M.A, MPH (ABT)
name: Justice Abdulai Esq, LLM
name: Elorm Kwami Gorni, LLM
name: Edward A. Boateng, MB ChB, MGCS, FWACS
name: Josephine Sackey, BSC, MSC CLAM (ABAG)
name: Ebenezer Anyan, MBA, C.A, CTLFA
name: Francis Asante, M.A, MPH
Publisher: name: Zenodo
Year: 2024
Subjects: Abuse, Trauma, Family, Social care, Homeless, Child care.

description: Abstract: This research explores the lack of mediation and reunification for victims of broken homes and their families and seeks to sort the laid down support systems from the Canadian social care support systems. Reunification can be described as a roundtable involving the child and caregiver, trying to bring restoration and solutions to families disrupted by child welfare. Reunification is an ambiguous concept and reality, as it is open to multiple interpretations.

This paper dissect and digest the elements of broken homes, how reunification is essential but lacking in most situations and how it is a psychological relief for both victims, families using the Canadian social care support systems.

Bringing methodologies and theories together makes room for flexibility around research goals. That principle can be translated in to practice by talking about and prioritizing symbiotic frameworks. If frameworks are made intersectional and connective with one another and phenomena outside of themselves (phenomenology), then, coalitions and solidarities can take place. Alliances reduce vulnerabilities to poverty, homelessness, trauma, by forging links and connectivity amongst people and across differences

This paper centers on the social welfare system and philosophical underpinnings of processes systems use to transition victims of broken homes back to their families using support systems and regulations brining about an efficient universal reunification.
Supplementary figures from Evidence for a genetic sex determination in Cnidaria, the Mediterranean red coral (Corallium rubrum)
Creators: name: M. Pratlong
name: A. Haguenauer
name: S. Chenesseau
name: K. Brener
name: G. Mitta
name: E. Toulza
name: M. Bonabaud
name: S. Rialle
name: D. Aurelle
name: P. Pontarotti
Publisher: name: The Royal Society
Year: 2017
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Ecology
subject: 60408 Genomics

description: Sexual reproduction is widespread among eukaryotes, and the sex-determining processes vary greatly among species. While genetic sex determination (GSD) has been intensively described in bilaterian species, no example has yet been recorded among non-bilaterians. However, the quasi-ubiquitous repartition of GSD among multicellular species suggests that similar evolutionary forces can promote this system, and that these forces could occur also in non-bilaterians. Studying sex determination across the range of Metazoan diversity is indeed important to understand better the evolution of this mechanism and its lability. We tested the existence of sex-linked genes in the gonochoric red coral (Corallium rubrum, Cnidaria) using Restriction site-Associated DNA sequencing (RAD-Seq). We analysed 27 461 single nucleotide polymorphisms (SNPs) in 354 individuals from 12 populations including 53 that were morphologically sexed. We found a strong association between the allele frequencies of 472 SNPs and the sex of individuals, suggesting an XX/XY sex-determination system. This result was confirmed by the identification of 435 male-specific loci. An independent test confirmed that the amplification of these loci enabled us to identify males with absolute certainty. This is the first demonstration of a GSD system among non-bilaterian species and a new example of its convergence in multicellular eukaryotes.
title: Menstrual regulation outside health facilities in Bangladesh: a qualitative study
Creators: name: Eckersberger, E
Publisher: name: London School of Hygiene & Tropical Medicine
Year: 2020

description: Abortions are restricted in Bangladesh, and menstrual regulation (MR) exists as an approved alternative. MR is available from health facilities, yet more than twice as many procedures were performed outside health facilities in 2014, often performed under unsafe conditions and little is known about the reasons women seek informal providers. I conducted 43 interviews with women who had undergone MR outside health facilities to understand the lived experiences of women. I also conducted observations services, and had conversations about MR provision and services with community members, pharmacists, health staff, and official MR providers to contextualize women’s experiences. I used frameworks on trajectories to seeking abortion-related care and ecological models to examine women’s experiences. Participants spoke about restrictions of movement, how relationships with families, communities, and informal providers could facilitate or hinder seeking services, and how they themselves defined their pregnancies and MR procedures. Their experiences varied and they sought MR from informal providers for a multitude of interrelated reasons. Women did not attempt to seek MR at approved facilities before seeking informal providers, citing structural barriers such as finding clinicians at health facilities difficult to access. While more than two thirds of women sought follow up care, only 9 women ultimately sought follow up care at formal health facilities, and described additional difficulties accessing this care. A subset of women who used methods that can be safe, such as allopathic medication from pharmacies, had negative experiences and judged their procedures not to have been effective. Women spoke about significant barriers to seeking MR in health facilities, and in many cases struggle with essentially all aspects of care seeking. Experiences with formal providers led women to not consider these as options, and they found female information providers easiest to access. For MR to be more accessible at the community level, the wider cultural context of women’s domestic and social lives needs to be taken into account.
title: Basilii & Apollinaris Epistolae. Ex Harlaeano MS.
Creators: name: :Unkn
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2022

description: created: -
Additional file 4: of Use of esophageal balloon pressure-volume curve analysis to determine esophageal wall elastance and calibrate raw esophageal pressure: a bench experiment and clinical study
Creators: name: Sun, Xiu-Mei
name: Chen, Guang-Qiang
name: Huang, Hua-Wei
name: He, Xuan
name: Yang, Yan-Lin
name: Shi, Zhong-Hua
name: Xu, Ming
name: Zhou, Jian-Xin
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Physical Sciences not elsewhere classified
subject: Medicine
subject: Pharmacology
subject: Environmental Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Table S1. Measured chamber elastance (cmH2O/ml) in chambers with different inner volumes. (PDF 62Â kb)
Additional file 5: of Use of esophageal balloon pressure-volume curve analysis to determine esophageal wall elastance and calibrate raw esophageal pressure: a bench experiment and clinical study
Creators: name: Sun, Xiu-Mei
name: Chen, Guang-Qiang
name: Huang, Hua-Wei
name: He, Xuan
name: Yang, Yan-Lin
name: Shi, Zhong-Hua
name: Xu, Ming
name: Zhou, Jian-Xin
Publisher: name: figshare
Year: 2018
Subjects: Space Science
Medicine
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Information Systems not elsewhere classified

description: Detailed results in the clinical study (PDF 172Â kb)
title: Hazards of pesticides to bees, 16th International Symposium of the ICP-PR Bee Protection Group, - Proceedings -; 15th - 17th October, 2024; Sevilla (Spain)
Creators: name: :None
Publisher: name: Pistorius, Jens
Year: 2025
Subjects: subject: bee
subject: 630

description: Julius-Kühn-Archiv, vol. 481
title: Certificat d’appartenance aux Forces françaises de l’Intérieur, délivré à Yves Pérotin
Creators: name: Général Noiret Commandant La 8e RM
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Deuxième guerre mondiale
subject: homologation des services
subject: citations et décorations des combattants

description: Certificat d’appartenance aux Forces françaises de l’Intérieur, délivré à Yves Pérotin, ex maquisard du Vercors et soldat du 11e cuirassiers, pour services du 11 août 1943 au 2 septembre 1944, à Lyon, 26 novembre 1949
description: Source: GED Campus Condorcet Fonds Yves Pérotin CNRS-IHTP ARC 143 ; 3ARM_38
Supplementary tables from Evidence for a genetic sex determination in Cnidaria, the Mediterranean red coral (Corallium rubrum)
Creators: name: M. Pratlong
name: A. Haguenauer
name: S. Chenesseau
name: K. Brener
name: G. Mitta
name: E. Toulza
name: M. Bonabaud
name: S. Rialle
name: D. Aurelle
name: P. Pontarotti
Publisher: name: The Royal Society
Year: 2017
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Ecology
subject: 60408 Genomics

description: Sexual reproduction is widespread among eukaryotes, and the sex-determining processes vary greatly among species. While genetic sex determination (GSD) has been intensively described in bilaterian species, no example has yet been recorded among non-bilaterians. However, the quasi-ubiquitous repartition of GSD among multicellular species suggests that similar evolutionary forces can promote this system, and that these forces could occur also in non-bilaterians. Studying sex determination across the range of Metazoan diversity is indeed important to understand better the evolution of this mechanism and its lability. We tested the existence of sex-linked genes in the gonochoric red coral (Corallium rubrum, Cnidaria) using Restriction site-Associated DNA sequencing (RAD-Seq). We analysed 27 461 single nucleotide polymorphisms (SNPs) in 354 individuals from 12 populations including 53 that were morphologically sexed. We found a strong association between the allele frequencies of 472 SNPs and the sex of individuals, suggesting an XX/XY sex-determination system. This result was confirmed by the identification of 435 male-specific loci. An independent test confirmed that the amplification of these loci enabled us to identify males with absolute certainty. This is the first demonstration of a GSD system among non-bilaterian species and a new example of its convergence in multicellular eukaryotes.
The ESM contains a description of the model that we used for human-mediated dispersal and supplementary figures which show the results of the sensitivity analysis. from Dynamics of host populations affected by the emerging fungal pathogen Batrachochytrium salamandrivorans
Creators: name: Schmidt, Benedikt R.
name: Bozzuto, Claudio
name: Lötters, Stefan
name: Steinfartz, Sebastian
Publisher: name: The Royal Society
Year: 2017
Subjects: subject: Ecology
subject: FOS: Biological sciences
subject: Health Care
subject: Diseases
subject: 111706 Epidemiology
subject: FOS: Health sciences

description: Emerging infectious diseases cause extirpation of wildlife populations. We use an epidemiological model to explore the effects of a recently emerged disease caused by the salamander-killing chytrid fungus Batrachochytrium salamandrivorans (Bsal) on host populations, and to evaluate which mitigation measures are most likely to succeed. As individuals do not recover from Bsal, we used a model with the states susceptible, latent infection and infectious, and parametrized the model using data on host and pathogen taken from the literature and expert opinion. The model suggested that disease outbreaks can occur at very low host densities (one female per hectare). This density is far lower than host densities in the wild. Therefore, all naturally occurring populations are at risk. Bsal can lead to the local extirpation of the host population within a few months. Disease outbreaks are likely to fade out quickly. A spatial variant of the model showed that the pathogen could potentially spread rapidly. As disease mitigation during outbreaks is unlikely to be successful, control efforts should focus on preventing disease emergence and transmission between populations. Thus, this emerging wildlife disease is best controlled through prevention rather than subsequent actions.
Supplementary Figures S1-S3 from Suicides on the Austrian railway network: hotspot analysis and effect of proximity to psychiatric institutions
Creators: name: Strauss, Markus J.
name: Klimek, Peter
name: Sonneck, Gernot
name: Niederkrotenthaler, Thomas
Publisher: name: The Royal Society
Year: 2017
Subjects: subject: Health Care
subject: Diseases
subject: 111706 Epidemiology
subject: FOS: Health sciences
subject: 179999 Psychology and Cognitive Sciences not elsewhere classified
subject: FOS: Psychology
subject: 60801 Animal Behaviour
subject: FOS: Biological sciences

description: Railway suicide is a significant public health problem. In addition to the loss of lives, these suicides occur in public space, causing traumatization among train drivers and passengers, and significant public transport delays. Prevention efforts depend upon accurate knowledge of clustering phenomena across the railway network, and spatial risk factors. Factors such as proximity to psychiatric institutions have been discussed to impact on railway suicides, but analytic evaluations are scarce and limited. We identify 15 hotspots on the Austrian railway system while taking case location uncertainties into account. These hotspots represent 0.9% of the total track length (5916 km/3676 miles) that account for up to 17% of all railway suicides (N=1130). We model suicide locations on the network using a smoothed inhomogeneous Poisson process and validate it using randomization tests. We find that the density of psychiatric beds is a significant predictor of railway suicide. Further predictors are population density, multitrack structure and—less consistently—spatial socio-economic factors including total suicide rates. We evaluate the model for the identified hotspots and show that the actual influence of these variables differs across individual hotspots. This analysis provides important information for suicide prevention research and practice. We recommend structural separation of railway tracks from nearby psychiatric institutions to prevent railway suicide.
Supplementary Material from A biochemo-mechano coupled, computational model combining membrane transport and pericellular proteolysis in tissue mechanics
Creators: name: A.-T. Vuong
name: A. D. Rauch
name: W. A. Wall
Publisher: name: The Royal Society
Year: 2017
Subjects: Mechanics

description: Governing Equations of Porous Medium as well as further Details on Numerical Solution Approach, on Coupled Surface-Volume Scalar Transport on a Sphere and on Dissolution and Cell Example
Figure S1. Preparative (a) HPLC and (b) GC chromatograms. from Sex pheromone of a coccoid insect with sexual and asexual lineages: fate of an ancestrally essential sexual signal in parthenogenetic females
Creators: name: Tabata, Jun
name: Ichiki, Ryoko T.
name: Moromizato, Chie
name: Mori, Kenji
Publisher: name: The Royal Society
Year: 2017
Subjects: subject: Biochemistry
subject: Evolutionary Biology
subject: FOS: Biological sciences

description: The 5% diethyl ether/pentane fraction from silica gel open-column chromatography was separated by HPLC, and fraction Lc. 3 was separated by GC. The pheromone compound was isolated at Gc. 2.
title: Quantitative Analysis of Non-Linear Probabilistic State Estimation Filters for Deployment on Dynamic Unmanned Systems
Creators: name: McLoughlin, B
Publisher: name: Liverpool John Moores University
Year: 2020

description: The work conducted in this thesis is a part of an EU Horizon 2020 research initiative project known as DigiArt. This part of the DigiArt project presents and explores the design, formulation and implementation of probabilistically orientated state estimation algorithms with focus towards unmanned system positioning and three-dimensional (3D) mapping. State estimation algorithms are considered an influential aspect of any dynamic system with autonomous capabilities. Possessing the ability to predictively estimate future conditions enables effective decision making and anticipating any possible changes in the environment. Initial experimental procedures utilised a wireless ultra-wide band (UWB) based communication network. This system functioned through statically situated beacon nodes used to localise a dynamically operating node. The simultaneous deployment of this UWB network, an unmanned system and a Robotic Total Station (RTS) with active and remote tracking features enabled the characterisation of the range measurement errors associated with the UWB network. These range error metrics were then integrated into an Range based Extended Kalman Filter (R-EKF) state estimation algorithm with active outlier identification to outperform the native approach used by the UWB system for two-dimensional (2D) pose estimation.The study was then expanded to focus on state estimation in 3D, where a Six Degreeof-Freedom EKF (6DOF-EKF) was designed using Light Detection and Ranging (LiDAR) as its primary observation source. A two step method was proposed which extracted information between consecutive LiDAR scans. Firstly, motion estimation concerning Cartesian states x, y and the unmanned system’s heading (ψ) was achieved through a 2D feature matching process. Secondly, the extraction and alignment of ground planes from the LiDAR scan enabled motion extraction for Cartesian position z and attitude angles roll (θ) and pitch (φ). Results showed that the ground plane alignment failed when two scans were at 10.5◦ offset. Therefore, to overcome this limitation an Error State Kalman Filter (ES-KF) was formulated and deployed as a sub-system within the 6DOF-EKF. This enabled the successful tracking of roll, pitch and the calculation of z. The 6DOF-EKF was seen to outperform the R-EKF and the native UWB approach, as it was much more stable, produced less noise in its position estimations and provided 3D pose estimation.
Supplementary Material from Evolution of mutation rates in hypermutable populations of Escherichia coli propagated at very small effective population size
Creators: name: Singh, Tanya
name: Hyun, Meredith
name: Sniegowski, Paul
Publisher: name: The Royal Society
Year: 2017
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: Ecology

description: Mutation is the ultimate source of the genetic variation—including variation for mutation rate itself—that fuels evolution. Natural selection can raise or lower the genomic mutation rate of a population by changing the frequencies of mutation rate modifier alleles associated with beneficial and deleterious mutations. Existing theory and observations suggest that where selection is minimized, rapid systematic evolution of mutation rate either up or down is unlikely. Here, we report systematic evolution of higher and lower mutation rates in replicate hypermutable Escherichia coli populations experimentally propagated at very small effective size—a circumstance under which selection is greatly reduced. Several populations went extinct during this experiment, and these populations tended to evolve elevated mutation rates. In contrast, populations that survived to the end of the experiment tended to evolve decreased mutation rates. We discuss the relevance of our results to current ideas about the evolution, maintenance and consequences of high mutation rates.
Supplementary Figures S1-S3 from Suicides on the Austrian railway network: hotspot analysis and effect of proximity to psychiatric institutions
Creators: name: Strauss, Markus
name: Klimek, Peter
name: Sonneck, Gernot
name: Niederkrotenthaler, Thomas
Publisher: name: The Royal Society
Year: 2017
Subjects: subject: Health Care
subject: Diseases
subject: 111706 Epidemiology
subject: FOS: Health sciences
subject: 179999 Psychology and Cognitive Sciences not elsewhere classified
subject: FOS: Psychology
subject: 60801 Animal Behaviour
subject: FOS: Biological sciences

description: Railway suicide is a significant public health problem. In addition to the loss of lives, these suicides occur in public space, causing traumatization among train drivers and passengers, and significant public transport delays. Prevention efforts depend upon accurate knowledge of clustering phenomena across the railway network, and spatial risk factors. Factors such as proximity to psychiatric institutions have been discussed to impact on railway suicides, but analytic evaluations are scarce and limited. We identify 15 hotspots on the Austrian railway system while taking case location uncertainties into account. These hotspots represent 0.9% of the total track length (5916 km/3676 miles) that account for up to 17% of all railway suicides (N=1130). We model suicide locations on the network using a smoothed inhomogeneous Poisson process and validate it using randomization tests. We find that the density of psychiatric beds is a significant predictor of railway suicide. Further predictors are population density, multitrack structure and—less consistently—spatial socio-economic factors including total suicide rates. We evaluate the model for the identified hotspots and show that the actual influence of these variables differs across individual hotspots. This analysis provides important information for suicide prevention research and practice. We recommend structural separation of railway tracks from nearby psychiatric institutions to prevent railway suicide.
POLARIZATION TENSOR FOR THE INCOMPATIBILITY OPERATOR IN 2D from Incompatibility-governed elasto-plasticity for continua with dislocations
Creators: name: Amstutz, Samuel
name: Goethem, Nicolas Van
Publisher: name: The Royal Society
Year: 2017
Subjects: subject: Mechanical Engineering
subject: FOS: Mechanical engineering
subject: 10301 Numerical Analysis
subject: FOS: Mathematics
subject: 19999 Mathematical Sciences not elsewhere classified

description: In this paper, a novel model for elasto-plastic continua is presented and developed from the ground up. It is based on the interdependence between plasticity, dislocation motion and strain incompatibility. A generalized form of the equilibrium equations is provided, with as additional variables, the strain incompatibility and an internal thermodynamic variable called incompatibility modulus, which drives the plastic behaviour of the continuum. The traditional equations of elasticity are recovered as this modulus tends to infinity, while perfect plasticity corresponds to the vanishing limit. The overall nonlinear scheme is determined by the solution of these equations together with the computation of the topological derivative of the dissipation, in order to comply with the second principle of thermodynamics.
Additional file 6: of Use of esophageal balloon pressure-volume curve analysis to determine esophageal wall elastance and calibrate raw esophageal pressure: a bench experiment and clinical study
Creators: name: Sun, Xiu-Mei
name: Chen, Guang-Qiang
name: Huang, Hua-Wei
name: He, Xuan
name: Yang, Yan-Lin
name: Shi, Zhong-Hua
name: Xu, Ming
name: Zhou, Jian-Xin
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Pharmacology
subject: Information Systems not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Mental Health

description: Table S2. Individual data of balloon volume and esophageal wall elastance. (PDF 71Â kb)