cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
A comparison of quasar emission reconstruction techniques for $z\geq5.0$ Lyman-$α$ and Lyman-$β$ transmission
Creators: name: Bosman, S. E. I.
name: Ďurovčíková, D.
name: Davies, F. B.
name: Eilers, A. C.
Publisher: name: arXiv
Year: 2020
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: FOS: Physical sciences

description: Reconstruction techniques for intrinsic quasar continua are crucial for the precision study of Lyman-$α$ (Ly-$α$) and Lyman-$β$ (Ly-$β$) transmission at $z>5.0$, where the $λ<1215 A$ emission of quasars is nearly completely absorbed. While the number and quality of spectroscopic observations has become theoretically sufficient to quantify Ly-$α$ transmission at $5.05.7$ with IR X-Shooter spectroscopy, obtaining well-characterised measurements for the mean flux transmission at $4.7
description: Accepted for publication in MNRAS; new Appendix added, conclusions unchanged. 13 pages plus Appendix
Additional file 3 of Allogeneic human neural stem cells for improved therapeutic delivery to peritoneal ovarian cancer
Creators: name: Mooney, Rachael
name: Abidi, Wafa
name: Batalla-Covello, Jennifer
name: Ngai, Hoi Wa
name: Hyde, Caitlyn
name: Machado, Diana
name: Abdul-Majid, Asma
name: Yanan Kang
name: Hammad, Mohamed
name: Flores, Linda
name: Copeland, Greg
name: Dellinger, Thanh
name: Han, Ernest
name: Berlin, Jacob
name: Aboody, Karen S.
Publisher: name: figshare
Year: 2021
Subjects: subject: Biophysics
subject: Biochemistry
subject: Space Science
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 3: Supplementary Figure 3. NSC clearance kinetics. (A) Retention and viability of DiR-labeled NSC.eGFP.ffluc cells over a two-week period following IP injection into n = 4 tumor-bearing nude mice (solid line, DiR fluorescence; dotted line, ffluc expression). Once localized to tumors, the NSCs remained present for at least 3 days, according to steady NSC-associated DiR signals. However, NSC-specific firefly luciferase expression decrease quickly post-transplantation. (B) Fluorescent images of sectioned tumors obtained either 1 day (D1) or 11 days (D11) after IP injection of NSCs (magenta). Anti-caspase-3/7 antibodies were used to visualize apoptosis. DiR-labeled NSCs were ~ 30% positive for capsase-3/7 on both day 1 (35.0%) and day 11 (32.1%). Data represents % caspase + DIR-labeled NSCs observed in 3 stained slides of tumor sections over which 8 (Day 1) or 18 (Day 11) representative fields of view were quantified using ImageJ software.
Free expansion of fermionic dark solitons in a boson-fermion mixture
Creators: name: Adhikari, Sadhan K.
Publisher: name: arXiv
Year: 2005
Subjects: subject: Other Condensed Matter (cond-mat.other)
subject: Soft Condensed Matter (cond-mat.soft)
subject: Pattern Formation and Solitons (nlin.PS)
subject: FOS: Physical sciences

description: We use a time-dependent dynamical mean-field-hydrodynamic model to study the formation of fermionic dark solitons in a trapped degenerate fermi gas mixed with a Bose-Einstein condensate in a harmonic as well as a periodic optical-lattice potential. The dark soliton with a "notch" in the probability density with a zero at the minimum is simulated numerically as a nonlinear continuation of the first vibrational excitation of the linear mean-field-hydrodynamic equations, as suggested recently for pure bosons. We study the free expansion of these dark solitons as well as the consequent increase in the size of their central notch and discuss the possibility of experimental observation of the notch after free expansion.
description: 14 pages, 6 figures
Additional file 6 of Cardiovascular risk factor mapping and distribution among adults in Mukono and Buikwe districts in Uganda: small area analysis
Creators: name: Musinguzi, Geofrey
name: Rawlance Ndejjo
name: Ssinabulya, Isaac
name: Bastiaens, Hilde
name: Marwijk, Harm Van
name: Wanyenze, Rhoda K.
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Biotechnology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 6: Table S6. Parish and sex-specific prevalence of fruits and vegetables consumption -- A Cardiovascular Disease Risk Factor Atlas among adults in Mukono and Buikwe districts in Uganda – Analysis of Baseline data: The SPICES Project.
U.S. Meat Demand: Household Dynamics and Media Information Impacts
Creators: name: Tonsor, Glynn T.
name: Mintert, James R.
name: Schroeder, Ted C.
name: Tonsor, Glynn T.
name: Mintert, James R.
name: Schroeder, Ted C.
Publisher: name: Unknown
Year: 2010
Subjects: subject: Demand and Price Analysis
subject: Food Consumption/Nutrition/Food Safety
subject: Livestock Production/Industries
subject: Atkins diet
subject: female workforce
subject: food away from home
subject: food safety
subject: health concerns
subject: meat recalls
subject: U.S. meat demand

description: This article uses national, quarterly data to examine U.S. meat demand using the Rotterdam model. We investigate the effect of multiple information indices linking different health concerns with diet, changes in household dynamics, and meat recall information. Medical journal articles linking iron, zinc, and protein with health and diet increase beef and poultry demand, whereas articles dealing with fat, cholesterol, and diet concerns reduce beef demand. Increasing consumption of food away from home enhances pork and poultry demand while reducing beef demand. Combined, these results provide a more complete and current understanding of the impact of multiple information factors faced by U.S. consumers.
Characterisation of homogeneous fractional Sobolev spaces
Creators: name: Brasco, Lorenzo
name: Gómez-Castro, David
name: Vázquez, Juan Luis
Publisher: name: arXiv
Year: 2020
Subjects: subject: Analysis of PDEs (math.AP)
subject: Functional Analysis (math.FA)
subject: FOS: Mathematics

description: Our aim is to characterize the homogeneous fractional Sobolev-Slobodecki\uı spaces $\mathcal{D}^{s,p} (\mathbb{R}^n)$ and their embeddings, for $s \in (0,1]$ and $p\ge 1$. They are defined as the completion of the set of smooth and compactly supported test functions with respect to the Gagliardo-Slobodecki\uı seminorms. For $s\,p < n$ or $s = p = n = 1$ we show that $\mathcal{D}^{s,p}(\mathbb{R}^n)$ is isomorphic to a suitable function space, whereas for $s\,p \ge n$ it is isomorphic to a space of equivalence classes of functions, differing by an additive constant. As one of our main tools, we present a Morrey-Campanato inequality where the Gagliardo-Slobodecki\uı seminorm controls from above a suitable Campanato seminorm.
description: 31 pages, an error in the proof of Lemma A.1 has been fixed
Optimal Length of Moving Average to Forecast Futures Basis
Creators: name: Hatchett, Robert B.
name: Brorsen, B. Wade
name: Anderson, Kim B.
name: Hatchett, Robert B.
name: Brorsen, B. Wade
name: Anderson, Kim B.
Publisher: name: Unknown
Year: 2010
Subjects: subject: Marketing
subject: FOS: Economics and business
subject: basis forecast
subject: grain
subject: Law of One Price
subject: moving averages
subject: structural change

description: The question addressed in this study is which length of historical moving average provides the best forecast of futures basis. Differences in observed forecast accuracy among the different moving averages are usually less than a cent per bushel, and most are not statistically significant. Further, the search for an optimal length of moving average may be futile since the optimal length depends on how much structural change has occurred. Our recommendation is to use moving averages when there has been no structural change and to use last year’s basis or an alternative approach if the forecaster perceives that a structural change has occurred.
Additional file 2 of Allogeneic human neural stem cells for improved therapeutic delivery to peritoneal ovarian cancer
Creators: name: Mooney, Rachael
name: Abidi, Wafa
name: Batalla-Covello, Jennifer
name: Ngai, Hoi Wa
name: Hyde, Caitlyn
name: Machado, Diana
name: Abdul-Majid, Asma
name: Yanan Kang
name: Hammad, Mohamed
name: Flores, Linda
name: Copeland, Greg
name: Dellinger, Thanh
name: Han, Ernest
name: Berlin, Jacob
name: Aboody, Karen S.
Publisher: name: figshare
Year: 2021
Subjects: subject: Biophysics
subject: Biochemistry
subject: Space Science
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 2: Supplementary Figure 2. Neural stem cells tropism to peritoneal ovarian cancer metastasis. Representative fluorescence images of neural stem cells labeled with either magenta DiD (A-C) or fluorescent orange (D-F) or red nanoparticles (G-I). Neural stem cells demonstrate good distribution in tumor but not in adjacent normal tissues (liver, intestine, kidney, omentum, stomach, pancreas or spleen). (2 million NSCs in 200uL PBS injected i.p. on Day 38; then harvested 4 days post-NSC injection). Scale bars = 1000 μm and applies to all images.
Additional file 7 of Cardiovascular risk factor mapping and distribution among adults in Mukono and Buikwe districts in Uganda: small area analysis
Creators: name: Musinguzi, Geofrey
name: Rawlance Ndejjo
name: Ssinabulya, Isaac
name: Bastiaens, Hilde
name: Marwijk, Harm Van
name: Wanyenze, Rhoda K.
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Biotechnology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 7: Figure S1. Map of Muono and Buikwe district showing the distribution of various Cardivacular Disease Risk Factors.
Complexity of Self-Assembled Shapes
Creators: name: Soloveichik, David
name: Winfree, Erik
Publisher: name: arXiv
Year: 2004
Subjects: subject: Computational Complexity (cs.CC)
subject: FOS: Computer and information sciences
subject: F.1.1; F.1.3

description: The connection between self-assembly and computation suggests that a shape can be considered the output of a self-assembly ``program,'' a set of tiles that fit together to create a shape. It seems plausible that the size of the smallest self-assembly program that builds a shape and the shape's descriptional (Kolmogorov) complexity should be related. We show that when using a notion of a shape that is independent of scale, this is indeed so: in the Tile Assembly Model, the minimal number of distinct tile types necessary to self-assemble a shape, at some scale, can be bounded both above and below in terms of the shape's Kolmogorov complexity. As part of the proof of the main result, we sketch a general method for converting a program outputting a shape as a list of locations into a set of tile types that self-assembles into a scaled up version of that shape. Our result implies, somewhat counter-intuitively, that self-assembly of a scaled-up version of a shape often requires fewer tile types. Furthermore, the independence of scale in self-assembly theory appears to play the same crucial role as the independence of running time in the theory of computability. This leads to an elegant formulation of languages of shapes generated by self-assembly. Considering functions from integers to shapes, we show that the running-time complexity, with respect to Turing machines, is polynomially equivalent to the scale complexity of the same function implemented via self-assembly by a finite set of tile types. Our results also hold for shapes defined by Wang tiling -- where there is no sense of a self-assembly process -- except that here time complexity must be measured with respect to non-deterministic Turing machines.
description: Extended abstract appears in DNA Computing 10; this is the full version and will be submitted elsewhere. 25 pages
The Impact of Changes in Income Distribution on Current and Future Food Demand in Urban China
Creators: name: Zheng, Zhihao
name: Henneberry, Shida Rastegari
name: Zheng, Zhihao
name: Henneberry, Shida Rastegari
Publisher: name: Unknown
Year: 2010
Subjects: subject: Demand and Price Analysis
subject: Food Consumption/Nutrition/Food Safety
subject: China food demand
subject: income distribution
subject: urban income inequality

description: The impact of changes in income distribution on food demand in the urban Jiangsu province of China is estimated in this study. Findings suggest that changes in income distribution have a considerable impact on the demand for individual food commodity groups. Therefore, given that a significant change in income distribution has occurred in urban China, food demand projections should account for expected changes in future income distribution.
Dicranophragma Osten Sacken 1860
Creators: name: Mederos, Jorge
name: Gago, Sergi
name: Brañas, Neus
name: Fadrique, Floren
name: Caballero-López, Berta
name: Masó, Glòria
Publisher: name: Zenodo
Year: 2020
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Limoniidae
Dicranophragma

description: Key to the species of the genus Dicranophragma known from Iberian Peninsula
1. Wing without spots, only stigma marked, sometimes poorly defined; light brown......................... 2
 – Stigma dark, well-marked, light brown spots at origin of Rs, median vein and basal end of discal cell................................................................................................. D. (B.) adjunctum (Walker, 1848)
 2. Stigma poorly defined, light-grey pleura, antenna reaching to about mid coxa, body length 6.0– 8.5 mm, wing length 6.0– 9.5 mm.................................................. D. (B.) nemorale (Meigen, 1818)
 – Stigma light-brown, pleura grey to greenish gray, antenna barely reaches fore coxa, body length 7.0– 11.5 mm, wing length 7.4–10.5 mm...................................... D. (B.) relictum Mederos sp. nov.
description: Published as part of Mederos, Jorge, Gago, Sergi, Brañas, Neus, Fadrique, Floren, Caballero-López, Berta & Masó, Glòria, 2020, A new Dicranophragma (Diptera: Limoniidae) from a hypogeous environment in Catalonia (Iberian Peninsula), pp. 109-121 in European Journal of Taxonomy 724 on page 112, DOI: 10.5852/ejt.2020.724.1163, http://zenodo.org/record/4298044
A Dynamic Model of Mesh Size Regulatory Compliance
Creators: name: Akpalu, Wisdom
name: Akpalu, Wisdom
Publisher: name: Unknown
Year: 2010
Subjects: subject: Resource /Energy Economics and Policy
subject: crime
subject: dynamic model
subject: fishery
subject: regulation

description: This paper employs a dynamic model for crimes that involve time and punishment to analyze the use of a net with illegal mesh size in a management regime where each community claims territorial use right over a fishery but has a discount rate that may differ from the social discount rate. The equilibrium stock and harvest levels are found to be much lower if the regulation is violated. Moreover, the optimal penalty for violation must be decreasing in the shadow cost of taking the risk to fish illegally, and increasing the risk of punishment increases the equilibrium stock level.
Additional file 12 of Eggshell and environmental bacteria contribute to the intestinal microbiota of growing chickens
Creators: name: Maki, Joel J.
name: Bobeck, Elizabeth A.
name: Sylte, Matthew J.
name: Looft, Torey
Publisher: name: figshare
Year: 2020
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 12: Figure S7. List of ileum-associated bacterial ASVs shared between bacterial input groups and trials. ASVs are listed with a number followed by the associated family and genus classifications and a number if there are multiple, unique ASVs with the same family and genus classifications. Bolded numbers are > 1.0% relative abundance. Core shared ASVs in the upper table are those present at > 1.0% relative abundance in a least one of the microbial input groups in both trials. ASVs present at > 1.0% relative abundance in a least one of the microbial input groups in only one trial are found in the lower potion of the table. Venn diagrams at the bottom of the figure show the sharing of ASVs between microbial input groups with > 10 reads within a trial.
Stability of smectic phases in hard-rod mixtures
Creators: name: Martinez-Raton, Yuri
name: Velasco, Enrique
name: Mederos, Luis
Publisher: name: arXiv
Year: 2005
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: Using density-functional theory, we have analyzed the phase behavior of binary mixtures of hard rods of different lengths and diameters. Previous studies have shown a strong tendency of smectic phases of these mixtures to segregate and, in some circumstances, to form microsegregated phases. Our focus in the present work is on the formation of columnar phases which some studies, under some approximations, have shown to become thermodynamically stable prior to crystallization. Specifically we focus on the relative stability between smectic and columnar phases, a question not fully addressed in previous work. Our analysis is based on two complementary perspectives: on the one hand, an extended Onsager theory, which includes the full orientational degrees of freedom but with spatial and orientational correlations being treated in an approximate manner; on the other hand, we formulate a Zwanzig approximation of fundamental-measure theory on hard parallelepipeds, whereby orientations are restricted to be only along three mutually orthogonal axes, but correlations are faithfully represented. In the latter case novel, complete phase diagrams containing regions of stability of liquid-crystalline phases are calculated. Our findings indicate that the restricted-orientation approximation enhances the stability of columnar phases so as to preempt smectic order completely while, in the framework of the extended Onsager model, with full orientational degrees of freedom taken into account, columnar phases may preempt a large region of smectic stability in some mixtures, but some smectic order still persists.
description: 14 pages, 16 figures. To appear in JCP
Magnetic Flux Ropes in the Solar Corona: Structure and Evolution toward Eruption
Creators: name: Liu, Rui
Publisher: name: arXiv
Year: 2020
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Space Physics (physics.space-ph)
subject: FOS: Physical sciences

description: Magnetic flux ropes are characterized by coherently twisted magnetic field lines, which are ubiquitous in magnetized plasmas. As the core structure of various eruptive phenomena in the solar atmosphere, flux ropes hold the key to understanding the physical mechanisms of solar eruptions, which impact the heliosphere and planetary atmospheres. Strongest disturbances in the Earth's space environments are often associated with large-scale flux ropes from the Sun colliding with the Earth's magnetosphere, leading to adverse, sometimes catastrophic, space-weather effects. However, it remains elusive as to how a flux rope forms and evolves toward eruption, and how it is structured and embedded in the ambient field. The present paper addresses these important questions by reviewing current understandings of coronal flux ropes from an observer's perspective, with emphasis on their structures and nascent evolution toward solar eruptions, as achieved by combining observations of both remote sensing and in-situ detection with modeling and simulation. It highlights an initiation mechanism for coronal mass ejections (CMEs) in which plasmoids in current sheets coalesce into a `seed' flux rope whose subsequent evolution into a CME is consistent with the standard model, thereby bridging the gap between microscale and macroscale dynamics.
description: Invited review accepted for publication in RAA
Additional file 1 of Allogeneic human neural stem cells for improved therapeutic delivery to peritoneal ovarian cancer
Creators: name: Mooney, Rachael
name: Abidi, Wafa
name: Batalla-Covello, Jennifer
name: Ngai, Hoi Wa
name: Hyde, Caitlyn
name: Machado, Diana
name: Abdul-Majid, Asma
name: Yanan Kang
name: Hammad, Mohamed
name: Flores, Linda
name: Copeland, Greg
name: Dellinger, Thanh
name: Han, Ernest
name: Berlin, Jacob
name: Aboody, Karen S.
Publisher: name: figshare
Year: 2021
Subjects: subject: Biophysics
subject: Biochemistry
subject: Space Science
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 1: Supplementary Figure 1. Murine ID8 ovarian cancer cell line modified to stably express green fluorescent protein (eGFP) and firefly luciferase (ffluc). (A): Phase and fluorescence microscopy images of eGFP-positive ID8 (ID8.eGFP.ffluc) cells five days post-infection. Scale bar = 50 μm. (B): Representative histogram of ID8.eGFP.ffluc cells quantified by flow cytometry 15 days after infection. (C): Bioluminescent images confirming tumor engraftment after peritoneal administration of 5 × 106 ID8.eGFP.ffluc cells into immunocompetent C57Bl/6 mice, color scale bar shown in relative light units. (D): Representative photograph demonstrating the development of ascites in a C57Bl/6 mouse, two months after inoculation with ID8.eGFP.ffluc cells. (E): Ex vivo photograph of the peritoneal wall harvested from a C57Bl/6 mouse inoculated with ID8.eGFP.ffluc cells.
Frustrated three-leg spin tubes: from spin 1/2 with chirality to spin 3/2
Creators: name: Fouet, J. -B.
name: Laeuchli, A.
name: Pilgram, S.
name: Noack, R. M.
name: Mila, F.
Publisher: name: arXiv
Year: 2005
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: Motivated by the recent discovery of the spin tube [(CuCl$_2$tachH)$_3$Cl]Cl$_2$, we investigate the properties of a frustrated three-leg spin tube with antiferromagnetic intra-ring and inter-ring couplings. We pay special attention to the evolution of the properties from weak to strong inter-ring coupling and show on the basis of extensive density matrix renormalization group and exact diagonalization calculations that the system undergoes a first-order phase transition between a dimerized gapped phase at weak coupling that can be described by the usual spin-chirality model and a gapless critical phase at strong coupling that can be described by an effective spin-3/2 model. We also show that there is a magnetization plateau at 1/3 in the gapped phase and slightly beyond. The implications for [(CuCl$_2$tachH)$_3$Cl]Cl$_2$ are discussed, with the conclusion that this system behaves essentially as a spin-3/2 chain.
description: 8 pages, 9 figures, revised version
Coordinate time dependence in Quantum Gravity
Creators: name: Bojowald, Martin
name: Singh, Parampreet
name: Skirzewski, Aureliano
Publisher: name: arXiv
Year: 2004
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The intuitive classical space-time picture breaks down in quantum gravity, which makes a comparison and the development of semiclassical techniques quite complicated. Using ingredients of the group averaging method to solve constraints one can nevertheless introduce a classical coordinate time into the quantum theory, and use it to investigate the way a semiclassical continuous description emerges from discrete quantum evolution. Applying this technique to test effective classical equations of loop cosmology and their implications for inflation and bounces, we show that the effective semiclassical theory is in good agreement with the quantum description even at short scales.
description: 35 pages, 17 figure. Revised version. To appear in Phys. Rev. D
Remodeling of the Saccharomyces cerevisiae transcriptome in response to acetic acid
Creators: name: Spriggs, Cherie N.
Publisher: name: University of British Columbia
Year: 2009

description: Sluggish or stuck wine fermentations occasionally occur in wineries and wines from these problem fermentations are susceptible to microbial spoilage and oxidation. Many factors, including the presence of acetic acid are correlated with these fermentations. The effect of acetic acid inhibition on the growth and fermentation rate of Saccharomyces cerevisiae has been well studied but mainly under laboratory conditions in media containing 1 % to at most 5 % glucose while shaking. These conditions are vastly different from wine-making conditions and we have a limited knowledge as to why stuck or sluggish fermentations occur. We used DNA microarray technology to investigate how 0.5, 1.5 or 3.0 g/L acetic acid affected the transcriptome of fermenting wine yeast after 20, 50 or 70 % of the sugars had been fermented. Global gene expression analyses revealed that when S. cerevisiae is under acetic acid stress, several metabolic processes are affected. The data collected after addition of 1.5 g/L acetic acid added at 20 % of the sugars were fermented show an up-regulation of PDR12 and PMA1 that encode ATP-dependent protein pumps to expel the weak acid anion and proton to prevent internal acidification. GLK1, TPS3, TSL1, TPS1, TPS2, NTH1, and NTH2 involved in trehalose metabolism were up-regulated as were GPD1, HOR2, and DAK1 involved in glycerol metabolism. Genes in sphingolipid metabolism including SUR2, LAC1, YPC1, SCS7 and DPL1 were up-regulated. The up-regulation of the genes in the TCA and electron transport chain even with 17.6 % (w/v) sugars remaining in the fermentation was surprising and might well be in response to an increased demand for ATP by the proton pumps. Genes involved in the general stress response including the transcription factors MSN2/4 were up-regulated as were 66 of 181 genes thought to be dependent on Msn2p/Msn4p. Electron microscopic studies of yeast cells exposed to acetic acid revealed a decrease in the number of autophagic bodies and autophagosomes as the length of exposure to acetic acid increased beyond 30 minutes. Data from remaining time points and acetic acid concentrations could not be grouped into known metabolic pathways. Our data have provided new insights into how yeast cells respond to acetic acid stress and also has potential to further our understanding of sluggish and stuck alcoholic fermentations that could prevent or minimize these problem fermentations.
Origin of hysteresis in shock wave reflection
Creators: name: Hu, Yan-Chao
name: Tang, Zhi-Gong
name: Yang, Yan-Guang
name: Zhou, Wen-Feng
name: Qin, Zhao-Hu
Publisher: name: arXiv
Year: 2020
Subjects: subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences

description: We report the mechanism of the hysteresis in the transition between Regular and Mach reflections. A new discovery is that, the hysteresis loop is in fact the projection of a higher dimensional path, i.e. the valley lines in the surface of dissipation, of which minimal values correspond to stable reflection configurations. Since the saddle-nodes bifurcate the valleies of the surface, they are actually the transition points of the two reflections. Furthermore, the predicted reflection configurations agree well with the experimental and numerical results, which is a validation of this theory.
Additional file 5 of Cardiovascular risk factor mapping and distribution among adults in Mukono and Buikwe districts in Uganda: small area analysis
Creators: name: Musinguzi, Geofrey
name: Rawlance Ndejjo
name: Ssinabulya, Isaac
name: Bastiaens, Hilde
name: Marwijk, Harm Van
name: Wanyenze, Rhoda K.
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Biotechnology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 5: Table S5. Parish and sex-specific prevalence of alcohol consumption -- A Cardiovascular Disease Risk Factor Atlas among adults in Mukono and Buikwe districts in Uganda – Analysis of Baseline data: The SPICES Project.
On the (De)Stabilization Effects of Biofuels: Relative Contributions of Policy Instruments and Market Forces
Creators: name: Gohin, Alexandre
name: Treguer, David
name: Gohin, Alexandre
name: Treguer, David
Publisher: name: Unknown
Year: 2010
Subjects: subject: Resource /Energy Economics and Policy
subject: biofuels
subject: policy
subject: risk

description: Ethanol production has recently surged in response to biofuel policies and increased fossil oil prices. We develop a partial equilibrium model focused on U.S. corn-based ethanol production with downside risk-averse farmers to assess the consequences of ethanol production on agricultural volatility. We report substantial effects on the distribution of corn prices with increases in the variance of prices received by farmers. Risk-averse corn farmers still benefit due to the higher mean price effect. From a methodological perspective, this analysis reveals that downside risk aversion may be important.
Additional file 10 of Eggshell and environmental bacteria contribute to the intestinal microbiota of growing chickens
Creators: name: Maki, Joel J.
name: Bobeck, Elizabeth A.
name: Sylte, Matthew J.
name: Looft, Torey
Publisher: name: figshare
Year: 2020
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 10: Figure S5. Stacked barcharts comparing the relative abundance of bacterial genera (> 2.0%) along the intestinal tract, both lumen and mucosa, at weeks 1, 3, and 6 for T1 and T2 birds.
Additional file 4 of Cardiovascular risk factor mapping and distribution among adults in Mukono and Buikwe districts in Uganda: small area analysis
Creators: name: Musinguzi, Geofrey
name: Rawlance Ndejjo
name: Ssinabulya, Isaac
name: Bastiaens, Hilde
name: Marwijk, Harm Van
name: Wanyenze, Rhoda K.
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Biotechnology
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 4: Table S4. Parish and sex-specific prevalence of Smoking -- A Cardiovascular Disease Risk Factor Atlas among adults in Mukono and Buikwe districts in Uganda – Analysis of Baseline data: The SPICES Project.
Polyakov loop in chiral quark models at finite temperature
Creators: name: Megias, E.
name: Arriola, E. Ruiz
name: Salcedo, L. L.
Publisher: name: arXiv
Year: 2004
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We describe how the inclusion of the gluonic Polyakov loop incorporates large gauge invariance and drastically modifies finite temperature calculations in chiral quark models after color neutral states are singled out. This generates an effective theory of quarks and Polyakov loops as basic degrees of freedom. We find a strong suppression of finite temperature effects in hadronic observables triggered by approximate triality conservation (Polyakov cooling), so that while the center symmetry breaking is exponentially small with the constituent quark mass, chiral symmetry restoration is exponentially small with the pion mass. To illustrate the point we compute some low energy observables at finite temperature and show that the finite temperature corrections to the low energy coefficients are $N_c$ suppressed due to color average of the Polyakov loop. Our analysis also shows how the phenomenology of chiral quark models at finite temperature can be made compatible with the expectations of chiral perturbation theory. The implications for the simultaneous center symmetry breaking-chiral symmetry restoration phase transition are also discussed.
description: 24 pages, 8 ps figures. Figure and appendix added. To appear in Physical Review D
Additional file 1 of Neuronal cell-based high-throughput screen for enhancers of mitochondrial function reveals luteolin as a modulator of mitochondria-endoplasmic reticulum coupling
Creators: name: Naia, Luana
name: Pinho, Catarina M.
name: Dentoni, Giacomo
name: Jianping Liu
name: Leal, Nuno Santos
name: Ferreira, Duarte M. S.
name: Schreiner, Bernadette
name: Filadi, Riccardo
name: Fão, Lígia
name: Connolly, Niamh M. C.
name: Forsell, Pontus
name: Nordvall, Gunnar
name: Shimozawa, Makoto
name: Greotti, Elisa
name: Basso, Emy
name: Theurey, Pierre
name: Gioran, Anna
name: Joselin, Alvin
name: Arsenian-Henriksson, Marie
name: Nilsson, Per
name: A. Cristina Rego
name: Ruas, Jorge L.
name: Park, David
name: Bano, Daniele
name: Pizzo, Paola
name: Prehn, Jochen H. M.
name: Ankarcrona, Maria
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Neuroscience
subject: Physiology
subject: Pharmacology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified

description: Additional file 1: Figure S1. Characterization of differentiated SH-SY5Y cells. Figure S2. Cytotoxicity of compounds evaluated in the HTS. Figure S3. Effects of luteolin in respiratory capacity and ΔΨm. Figure S4. Effects of luteolin in mitochondrial biogenesis and cristae organization. Figure S5. Effects of luteolin on calcium levels and characterization of isolated mitochondrial fractions.
Collective coordinate study of spin wave emission from dynamic domain wall
Creators: name: Tatara, Gen
name: de Zuazola, Rubén M. Otxoa
Publisher: name: arXiv
Year: 2020
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We study theoretically the spin wave emission from a moving domain wall in a ferromagnet. Introducing a deformation mode describing a modulation of the wall thickness in the collective coordinate description, we show that thickness variation couples to the spin wave linearly and induces spin wave emission. The dominant emitted spin wave turns out to be polarized in the out-of wall plane ($ϕ$)-direction. The emission contributes to the Gilbert damping parameter proportional to $\hbarω_ϕ/K$, the ratio of the angular frequency $ω_ϕ$ of $ϕ$ and the easy-axis anisotropy energy $K$.
Additional file 1 of Growth and neurodevelopment in low birth weight versus normal birth weight infants from birth to 24 months, born in an obstetric emergency hospital in Haiti, a prospective cohort study
Creators: name: Hilaire, Marjorie
name: Andrianou, Xanthi D.
name: Lenglet, Annick
name: Ariti, Cono
name: Kessiane Charles
name: Buitenhuis, Sonja
name: Brusselen, Daan Van
name: Roggeveen, Harriet
name: Ledger, Elizabeth
name: Rodnie Selva Denat
name: Bryson, Lindsay
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: Computational Biology

description: Additional file 1: Figure S1: Weight measurements in grams by NBW and LBW babies over 24 month follow up period. Figure S2: Weight gain (g per day per kg from previous visit) in the NBW and LBW babies over 24 month follow up period. Figure S3: Height measurements in cm for NBW and LBW babies over 24 month follow up period. Table S 1 Weight change per day (in g) from the previous visit by group (NBW vs LBW). Table S2 Estimated weight from linear mixed models and 95% confidence intervals (in grams) at birth, 6, 12, 18 and 24 months for NBW and LBW infants adjusted by age and sex. Table S3 Estimated length from linear mixed models and 95% confidence intervals (in grams) at birth, 6, 12, 18 and 24 months for NBW and LBW infants adjusted by sex. Table S4 Estimated Bayley Scales III raw scores from linear mixed models and 95% confidence intervals for gross motor skills, fine motor skills, cognitive skills, receptive communication skills and expressive communication skills in female infants. Table S5 Estimated Bayley Scales III raw scores from linear mixed models and 95% confidence intervals for gross motor skills, fine motor skills, cognitive skills, receptive communication skills and expressive communication skills in male infants. Table S6 Prediction models for outcome weight and length with predictor of age. Table S7: Prediction models for outcome weight and length with predictor of age and sex. Table S8: Prediction models for outcome weight and length with predictor of age, sex and prematurity. Table S9: Prediction models for cognitive, receptive communication and expressive communication skills with predictor of age. Table S10: Prediction models for cognitive, receptive communication and expressive communication skills with predictor of age and sex. Table S11: Prediction models for gross and fine motor skills with predictor of age. Table S12: Prediction models for gross and fine motor skills with predictor of age and sex. Table S13: Prediction models for gross and fine motor skills with predictor of age, sex and prematurity. Table S14: Reference list of the R packages used in the data analysis.
Additional file 11 of Eggshell and environmental bacteria contribute to the intestinal microbiota of growing chickens
Creators: name: Maki, Joel J.
name: Bobeck, Elizabeth A.
name: Sylte, Matthew J.
name: Looft, Torey
Publisher: name: figshare
Year: 2020
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 11: Figure S6. List of cecum-associated bacterial ASVs shared between bacterial input groups and trials. ASVs are listed with a number followed by the associated family and genus classifications and a number if there are multiple, unique ASVs with the same family and genus classifications. Bolded numbers are > 1.0% relative abundance. Core shared ASVs in the upper table are those present at > 1.0% relative abundance in a least one of the microbial input groups in both trials. ASVs present at > 1.0% relative abundance in a least one of the microbial input groups in only one trial are found in the lower potion of the table. Venn diagrams at the bottom of the figure show the sharing of ASVs between microbial input groups with > 10 reads within a trial.
An example of physical system with hyperbolic attractor of Smale - Williams type
Creators: name: Kuznetsov, Sergey P.
Publisher: name: arXiv
Year: 2005
Subjects: subject: Chaotic Dynamics (nlin.CD)
subject: FOS: Physical sciences

description: A simple and transparent example of a non-autonomous flow system, with hyperbolic strange attractor is suggested. The system is constructed on a basis of two coupled van der Pol oscillators, the characteristic frequencies differ twice, and the parameters controlling generation in both oscillators undergo a slow periodic counter-phase variation in time. In terms of stroboscopic Poincaré section, the respective four-dimensional mapping has a hyperbolic strange attractor of Smale - Williams type. Qualitative reasoning and quantitative data of numerical computations are presented and discussed, e.g. Lyapunov exponents and their parameter dependencies. A special test for hyperbolicity based on statistical analysis of distributions of angles between stable and unstable subspaces of a chaotic trajectory has been performed. Perspectives of further comparative studies of hyperbolic and non-hyperbolic chaotic dynamics in physical aspect are outlined.
description: 7 pages, 4 figures
Television as teacher : motivation to learn messages in children’s educational programming
Creators: name: Wainwright, Deborah Karin
Publisher: name: University of British Columbia
Year: 2009

description: This study examined the use of recognized production features and motivation to learn strategies in 3 educational television programs: Sesame Street, Between the Lions, and ZOOM. It was hypothesized that educational television may be limited with regard to its presentation of motivational strategies: A content analysis of 5 episodes of each subject program was conducted. Coders observed the use of production features of the medium believed to support children's learning from viewing, and the use of teacher and learner strategies known to support intrinsic motivation for learning. Coders also examined any attempts by these programs to extend the on-air lessons beyond the television viewing time. The results reveal that these programs incorporate many of the production features thought to support children's learning from television. But the results also show that few of the recognized motivation to learn techniques are being portrayed in the content of these programs. As well, there is little evidence of attempts to extend the lesson beyond the program viewing time. It is difficult to escape the conclusion that these educational children's programs are not providing much support for intrinsic motivation in their viewers. Suggestions for how producers can revise or develop programming that can motivate viewers are discussed. The results inform producers, researchers, and parents of learning and motivation to learn opportunities offered to children on educational television today.
Neutron Irradiation of Mg11B2 : From the Enhancement to the Suppression of Superconducting Properties
Creators: name: Putti, M.
name: Braccini, V.
name: Ferdeghini, C.
name: Gatti, F.
name: Manfrinetti, P.
name: Marre', D.
name: Palenzona, A.
name: Pallecchi, I.
name: Tarantini, C.
name: Sheikin, I.
name: Aebersold, H. U.
name: Lehmann, E.
Publisher: name: arXiv
Year: 2004
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: In this letter we present the effect of neutron irradiation up to fluences of 3.9 1019 n/cm2 on the superconducting properties of MgB2. In order to obtain a disorder structure homogeneously distributed, the experiment was carried out on bulk samples prepared with the 11B isotope. Up to fluences of 1018 n/cm2 the critical temperature is slightly diminished (36 K) and the superconducting properties are significantly improved; the upper critical field is increased from 13.5 T to 20.3 T at 12 K and the irreversibility field is doubled at 5 K. For larger neutron fluences the critical temperature is suppressed down to 12 K and the superconducting properties come out strongly degraded.
description: 13 pages, 4 figures. Submitted to Appl.Phys.Lett
Reversible and magnetically unassisted voltage-driven switching of magnetization in FeRh/PMN-PT
Creators: name: Fina, Ignasi
name: Quintana, Alberto
name: Martí, Xavier
name: Sánchez, Florencio
name: Foerster, Michael
name: Aballe, Lucia
name: Sort, Jordi
name: Fontcuberta, Josep
Publisher: name: arXiv
Year: 2020
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Reversible control of magnetization by electric fields without assistance from a subsidiary magnetic field or electric current could help reduce the power consumption in spintronic devices. When increasing temperature above room temperature, FeRh displays an uncommon antiferromagnetic to ferromagnetic phase transition linked to a unit cell volume expansion. Thus, using the strain exerted by an adjacent piezoelectric layer, the relative amount of antiferromagnetic and ferromagnetic regions can be tuned by an electric field applied to the piezoelectric material. Indeed, large variations in the saturation magnetization have been observed when straining FeRh films grown on suitable piezoelectric substrates. In view of its applications, the variations in the remanent magnetization rather than those of the saturation magnetization are the most relevant. Here, we show that in the absence of any bias external magnetic field, permanent and reversible magnetization changes as high as 34% can be induced by an electric field, which remain after this has been zeroed. Bulk and local magnetoelectric characterization reveals that the fundamental reason for the large magnetoelectric response observed at remanence is the expansion (rather than the nucleation) of ferromagnetic nanoregions.
description: Supporting videos: youtu.be/1_RbcO2tE64 ; youtu.be/wnRZxg0U6Fs
Learning to Discover Multi-Class Attentional Regions for Multi-Label Image Recognition
Creators: name: Gao, Bin-Bin
name: Zhou, Hong-Yu
Publisher: name: arXiv
Year: 2020
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: FOS: Computer and information sciences

description: Multi-label image recognition is a practical and challenging task compared to single-label image classification. However, previous works may be suboptimal because of a great number of object proposals or complex attentional region generation modules. In this paper, we propose a simple but efficient two-stream framework to recognize multi-category objects from global image to local regions, similar to how human beings perceive objects. To bridge the gap between global and local streams, we propose a multi-class attentional region module which aims to make the number of attentional regions as small as possible and keep the diversity of these regions as high as possible. Our method can efficiently and effectively recognize multi-class objects with an affordable computation cost and a parameter-free region localization module. Over three benchmarks on multi-label image classification, we create new state-of-the-art results with a single model only using image semantics without label dependency. In addition, the effectiveness of the proposed method is extensively demonstrated under different factors such as global pooling strategy, input size and network architecture. Code has been made available at~\url{https://github.com/gaobb/MCAR}.
description: 13 pages, Accepted by IEEE TIP (5-Jun-2021)
Consumers' Willingness to Pay for Treatment-Induced Quality Attributes in Anjou Pears
Creators: name: Zhang, Huifang
name: Gallardo, Rosa Karina
name: McCluskey, Jill J.
name: Kupferman, Eugene M.
name: Zhang, Huifang
name: Gallardo, Rosa Karina
name: McCluskey, Jill J.
name: Kupferman, Eugene M.
Publisher: name: Unknown
Year: 2010
Subjects: subject: Consumer/Household Economics
subject: Crop Production/Industries
subject: Resource /Energy Economics and Policy
subject: pears
subject: sensory
subject: willingness to pay

description: Ethylene treatments provide an effective method for shortening post-harvest ripening periods for winter Anjou pears and allow market availability throughout the year. However, pear quality may vary under different treatments. A sensory experiment and a consumer survey including questions that address valuation, assessments of sensory characteristics, purchasing habits, and demographics were conducted. Analyses indicate that treatment-induced quality losses significantly affect consumers’ willingness to pay (WTP). Mean WTP for each treatment reveals that consumers prefer pears with a six-day ethylene treatment and are willing to pay a premium of $0.25/pound compared to the market price.