cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Taumacera bella Bezděk 2019, comb. nov.
Creators: name: Bezděk, Jan
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Chrysomelidae
Taumacera
Taumacera bella

description: Taumacera bella (Weise, 1922), comb. nov.
Dorydea basalis Jacoby, 1889: 232 (original description, permanently invalid based on the Art 59.3 of ICZN (1999))
Platyxantha bella Weise, 1922: 109 (replacement name for Dorydea basalis Jacoby, 1889 nec Platyxantha basalis Duvivier, 1884)
Type material examined. Dorydea basalis: SYNTYPES: 1 ♂, ‘Bhamò / Birmania / Fea [p] VI [h] 188 [p] 6 [w, h] // basalis / Jac. [w, h] // Dorydea / basalis Jac. [b, h]’ (MSNG); 1 probably ♀ (only photograph seen), ‘Bhamò / Birmania / Fea [p] VI [h] 188 [p] 6 [w, h] // 1st Jacoby / Coll. [w, p] // Dorydea / basalis / Jac. [b, h] // Type [p] / 18351 [r, h]’ (MCZ).
Comments. WEISE (1922) classified Dorydea basalis Jacoby, 1889 in Platyxantha, found it homonymous with Platyxantha basalis Duvivier, 1884 and proposed a replacement name Platyxantha bella for Jacobyʼs species. Subsequent authors (MAULIK 1936, WILCOX 1973) classified Platyxantha bella in Palpoxena. I examined one male syntype of Dorydea basalis deposited in MSNG and photograph of additional syntype in MCZ. Undoubtedly this species belongs to Taumacera and is close to T. indica. Platyxantha basalis Duvivier, 1884 is here transferred to Hoplosaenidea (see below). However the name Dorydea basalis Jacoby, 1889 cannot be restored as a valid name because it is permanently invalid based on Art. 59.3 of the Code (ICZN 1999). The valid name of this species is Taumacera bella Weise, 1922, comb. nov.
description: Published as part of Bezděk, Jan, 2019, Taumacera revisited, with new synonyms, new combinations and a revised catalogue of the species (Coleoptera: Chrysomelidae: Galerucinae), pp. 23-52 in Acta Entomologica Musei Nationalis Pragae (Acta. Ent. Mus. Natl. Pragae) (Acta. Ent. Mus. Natl. Pragae) 59 (1) on page 30, DOI: 10.2478/aemnp-2019-0003, http://zenodo.org/record/4505520
Only a time machine
Creators: name: Evans, Mary Anna
Publisher: name: No Publisher Supplied
Year: 2015

description: Only a Time Machine is a collection of essays exploring issues of gender, science, motherhood, personal fulfillment, and identity. These essays put readers into the steel-toed boots of a nineteen-year-old woman working on an offshore natural gas platform, taking them with her on a thirty-year journey that ends in a very different pair of boots—the groovy go-go boots of a Star Trek science officer. Their author, Mary Anna Evans, is a licensed chemical engineer, an awardwinning novelist, and a very proud mother.
Taumacera centromaculata Medvedev 2008
Creators: name: Bezděk, Jan
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Chrysomelidae
Taumacera
Taumacera centromaculata

description: Taumacera centromaculata Medvedev, 2008
Taumacera centromaculata Medvedev, 2008: 432 (original description)
Type material examined. PARATYPE: ♀ (only photograph seen), ‘INDONESIA, BALI / Danau Buyan, 1300 m / 19.- 21.2.1994 / Bolm lgt. [w, p] // PARATYPUS [p] / Taumacera / centromaculata m. [h] / L. Medvedev det. [p] 2008 [r, h]’ (LMRM).
description: Published as part of Bezděk, Jan, 2019, Taumacera revisited, with new synonyms, new combinations and a revised catalogue of the species (Coleoptera: Chrysomelidae: Galerucinae), pp. 23-52 in Acta Entomologica Musei Nationalis Pragae (Acta. Ent. Mus. Natl. Pragae) (Acta. Ent. Mus. Natl. Pragae) 59 (1) on page 30, DOI: 10.2478/aemnp-2019-0003, http://zenodo.org/record/4505520
Second chances
Creators: name: Fera, Doreen Angela
Publisher: name: No Publisher Supplied
Year: 2015

description: When one thing ends, another begins, whether we are aware of it or not. Life is a series of hardships, punctuated by second chances sometimes provided to us, sometimes created by us through sheer will or tenacity, sometimes not seized, or sometimes not offered because the second chance is for others, and not for ourselves. Resiliency is no guarantee that a second chance will manifest, but it is requisite for survival. We follow our lives’ most difficult episodes by writing new chapters day-by-day. We are creating less than perfect drafts, but we are nonetheless changed as wounds begin to heal, no matter how deep or incurable they seem in our moment of loss. Whatever is taken from us is replaced by a different entity—wisdom or ignorance, a perpetual dance with our grief or our demons, or a new life that resembled nothing of our former self—a dream or a nightmare of our very own. Second Chances is an essay collection organized around the principle of resiliency and change, the forward momentum of life after loss, and the perspective we gain after having survived it.
Deliverable 5.1: Visualization components for sequences, networks, text, and high- dimensional data
Creators: name: Schreck, Tobias
name: Lengauer, Stefan
name: Waldert, Peter
name: Kantz, Benedikt
name: Grabner, Michael
name: Schilcher, Lukas
name: Percic, Dorjan
name: van Leeuwen, Casper
name: Lissandrini, Matteo
name: Romanovych, Anna
Publisher: name: Zenodo
Year: 2024

description: Research in HetERogeneous sEmantic Data integratIon for the guT-bRain interplaY (HEREDITARY) involves understanding properties, relationships and patterns in large and complex, heterogeneous data, to obtain knowledge from biomedical data sets. Interactive data visualization techniques help to overview and make sense of large and complex data sets, by finding appropriate visual representations and user interactions for the data. Also, interaction allows to drill down and view the data from different perspectives. Importantly, we can include data analysis algorithms into visualizations which can then be interactively controlled by the analyst. Resulting are Visual Analytics workflows which support domain users to effectively and efficiently analyze data.

Work Package 5 in HEREDITARY focuses on the research and development of effective tools for interactive visual data analysis, supporting the HEREDITARY use cases. This deliverable presents the results achieved in the first 12 months of the project, in developing visualization components for non-spatial data. The components have been informed by data and use cases from HEREDITARY partners and available open research data. The components are the basis for building standalone applications to address specific HEREDITARY use cases in the next project steps, including functionality for interactive search and user guidance
Taumacera cervicornis Bezděk 2019, comb. nov.
Creators: name: Bezděk, Jan
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Chrysomelidae
Taumacera
Taumacera cervicornis

description: Taumacera cervicornis (Baly, 1861), comb. nov.
(Figs 20, 31, 44, 56, 65)
Xenarthra cervicornis Baly, 1861: 299 (original description)
Type material examined. SYNTYPE: ♂, ‘Type [white round label with red collar, p] // Xenarthra / cervicornis / Baly / Ceylon [grey, h] // Baly Coll. [w, p]’ (BMNH).
Additional material examined. SRI LANKA: Kandy, vii.1910, 1 ♂ (BMNH); Kandy, iv.1907, 1♀ (BMNH); Kandy, 23.v.1910, 1♀ (BMNH); Kandy, vi.1908, 5 ♂♂ 12 ♀♀, G. E. Bryant leg. (BMNH); Ceylon, 1909, 3 ♂♂ 3 ♀♀, E. E. Green leg. (BMNH); Ceylon, 2 ♂♂ 1 ♀ (BMNH); Kandy, iii.1910, 1 ♀, J. Uzel leg. (NMPC).
Comments. The male syntype of Xenarthra cervicornis has the metasternal process therefore it is transferred to Taumacera.
description: Published as part of Bezděk, Jan, 2019, Taumacera revisited, with new synonyms, new combinations and a revised catalogue of the species (Coleoptera: Chrysomelidae: Galerucinae), pp. 23-52 in Acta Entomologica Musei Nationalis Pragae (Acta. Ent. Mus. Natl. Pragae) (Acta. Ent. Mus. Natl. Pragae) 59 (1) on pages 30-32, DOI: 10.2478/aemnp-2019-0003, http://zenodo.org/record/4505520
Hauntings
Creators: name: Lawrence, Nicole Lyn
Publisher: name: No Publisher Supplied
Year: 2015

description: This thesis examines ghost stories written by female authors of the Victorian period. I begin by briefly discussing the role of short supernatural fiction as part of the popular Victorian tradition of reading spooky stories together on Christmas Eve while huddled around the Christmas tree. Christmas Eve was considered a time when the veil between the living, natural world and the supernatural, spirit world was thinnest; for Victorians this tenuousness of the division between life and death raised questions of great cultural importance, which were reflected in the spiritualist and mesmerist movements, as well as in common public discourse. I then link the role of the spectral female found in ghost stories to that of the living, breathing Victorian woman by arguing that the developing role of the Victorian woman as moral figurehead of the English household severely limited the female experience to the private domestic sphere. Isolated from the outside world, the home, which is often the site of hauntings within supernatural tales, held the potential to become a prison to women. Seeking to better articulate Vanessa Dickerson’s concept of the “feminized limbo,” I then perform analytical close readings of various ghost stories written by Mary Elizabeth Braddon, Rhoda Broughton, and Charlotte Riddell, paying close attention to the role of women and the limiting social conditions affecting then which each writer sought to address through her stories. Through these close readings, it becomes apparent that women writers sought to insert their voices into public discourse concerning gendered cultural conditions which enervated women politically and socially, relegating them to a ghostlike state of social existence. Concluding the article length thesis is an annotated bibliography citing works for continued research intended to expand and further develop the project at a later date, potentially in an English doctoral program.
Oedemera (Oedemera) lateralis Gebler 1829
Creators: name: Ghahari, Hassan
name: Vázquez, Xavier A.
name: Kubisz, Daniel
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Oedemeridae
Oedemera
Oedemera lateralis

description: Oedemera (Oedemera) lateralis Gebler, 1829
Distribution in Iran. Ardabil (Samin et al. 2015).
General distribution. Europe, Russia (West Siberia), South Caucasus (Švihla 1999b, 2008a; Vázquez 2002; Kerimova & Huseynova 2014).
Chorotype. Centralasiatic-European.
description: Published as part of Ghahari, Hassan, Vázquez, Xavier A. & Kubisz, Daniel, 2017, Annotated checklist of the false blister beetles (Coleoptera: Tenebrionoidea: Oedemeridae) from Iran, pp. 321-334 in Zootaxa 4237 (2) on page 328, DOI: 10.11646/zootaxa.4237.2.6, http://zenodo.org/record/343834
Gentiana damyonensis Marquand 1928
Creators: name: Ma, Xin-Yin
name: Shen, Jia-Min
name: Guo, Xin-Qiang
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Magnoliopsida
Gentianales
Gentianaceae
Gentiana
Gentiana damyonensis

description: Gentiana damyonensis Marquand (1928: 51). Figs. 1, 2
Type:— CHINA. Xizang: Zogang county, Damyon (Damiyong), alpine pastures, alt. 4800−5200 m, 5 September 1922, F. Kingdon-Ward 5377 (holotype E00001656!; isotype K000857088!). Fig. 1.
Distribution and habitat:— Gentiana damyonensis is distributed in northwestern Yunnan and southeastern Xizang, China, and northern Kachin, Myanmar (Fig. 2). It grows in alpine pastures at altitudes of 3800−5200 m.
Additional specimens examined:— CHINA. Xizang: Zayü, FLPH Tibet Expedition 12-1439 (PE), Z.D. Fang et al. XZ-762 (SABG), Qinghai-Xizang Exped. 10695 (KUN), C.W Wang 65651 (PE). Yunnan: Gongshan, K.M. Feng 7795 (KUN, PE), K.M. Feng 7823 (KUN, PE), T.T. Yu 22754 (PE). MYANMAR. Kachin: Putao, G. Forrest 7591 (E, K).
Notes:—Without citing any specimens, Ho (1999) recorded that Gentiana damyonensis also occurred in Puge county in southwestern Sichuan. In the relevant Chinese herbaria, including CDBI, HNWP, IBSC, KUN, NWTC, PE, SM, SZ and WUK, we have been able to trace one PE sheet of C.T. Kuan 8039 from Puge identified as this species by Ting-Nong Ho. Although the plants on the sheet are rather incomplete, with only basal stem leaves and broken and withered flowers, they are much taller (20−30 cm) than those of the true G. damyonensis, which are usually 5−10 cm tall. This specimen was actually misidentified, and G. damyonensis does not occur in Puge.
description: Published as part of Ma, Xin-Yin, Shen, Jia-Min & Guo, Xin-Qiang, 2022, Clarification of the type locality and geographical distribution of Gentiana damyonensis (Gentianaceae, Gentianeae), pp. 131-134 in Phytotaxa 576 (1) on pages 132-133, DOI: 10.11646/phytotaxa.576.1.9, http://zenodo.org/record/7441273
title: The Corrupted “Wheel of Life”: An Essay on Ouroboroses
Creators: name: Uzlaner, Dmitry
Publisher: name: Freie Universität Berlin
Year: 2024
Subjects: subject: Gnosticism
subject: Christianity
subject: ouroboros
subject: religious symbolism
subject: Jacques Lacan
subject: psychoanalysis
subject: Carl Gustav Jung
subject: Saint Paul
classificationCode: 200
subject: Religion

description: The focus of this article is a symbolic image often found in world mythology – a giant snake or a dragon biting its own tail. This image is usually denoted by the Greek word “ouroboros” (οὐροβόρος), which means literally “eating its own tail.” This essay is devoted to an interpretation of this symbol, which the author sees as leading to the much broader topic of human unfreedom and the forms that this unfreedom takes. The first section deals with the unique features of Gnosticism which have made it appealing in extremely varied times and situations. Gnosticism will be the basis for my considerations about ouroboros. The author’s reflections start from understanding the Gnostic worldview as an expression of apprehensiveness about the radical otherworldliness of the human spirit and its alienation from the universe. The second section deals with the symbolism of the ouroboros and its place in Gnostic conceptual schemes as a reference to the closed cycle of nature that enslaves the human spirit. The third section attempts to decipher layer by layer the Gnostic conceptions associated with the ouroboros. Various levels of interpretation are identified: literal, mythological–magical, psychological-ascetic, and sociopolitical. In the fourth section, the author connects Gnostic ideas with Christianity by interpreting St. Paul’s Epistles, particularly his ideas concerning rulers and authorities. The place occupied by the ouroboros in the Christian universe is analyzed. The last section relies on the ideas of René Girard, Jacques Lacan, and Alain Badiou to illustrate the manifestations of the ouroboros in different dimensions of human existence, both individual and collective, with special emphasis on human desire and its futile circlings.
title: Technological innovation system analyses and sustainability Transitions: A literature review
Creators: name: Weckowska, Dagmara
name: Weiss, Daniel
name: Schwäbe, Carsten
name: Dreher, Carsten
Publisher: name: Freie Universität Berlin
Year: 2025
Subjects: subject: Technological innovation system
subject: Sustainability transitions
subject: Directionality
subject: Decline
subject: Socio-technical change
classificationCode: 330
subject: Wirtschaft

description: This paper reviews the literature on technological innovation systems (TIS) to explore how TIS studies have contributed to building the understanding of innovation processes driving sustainability transitions. We summarise the conceptual and methodological advancements in the TIS studies at three levels: (1) meso-level focused on TIS functions and structures; (2) macro-level explaining the TIS-context interactions; (3) micro-level elucidating the role of actors, agency and social interactions in a TIS. We argue that to improve the understanding of how innovation processes contribute to sustainability transitions, future TIS studies, at various levels, should further elaborate (1) the dynamics in mature and declining TISs, (2) the relation between TIS processes and structural change and (3) the directionality of socio-technical change. Such advancements in the field would enable more transformation-oriented policy recommendations from TIS studies.
The in-betweens
Creators: name: Loeb, Davon
Publisher: name: No Publisher Supplied
Year: 2015

description: The In-Betweens is a collection of lyrical non-fiction essays about the life of Davon Loeb. This collection represents issues a young biracial man faces in the American society that has no category box to check for both races. His meditations about race extends from New Jersey and out to Alabama by retelling stories concerning his family, friends, and community. This coming of age collection is equally narrative as it is lyrical. These essays will ask us how we arrive to new maturities while addressing the liminal spaces in-between them. Davon struggles with being a son, a brother, a friend, a lover, and a man who is seeking his identity through excavating the past and the present. This memoir will leave readers in the footsteps of any American in search of self-discovery.
Taumacera clypeata Bezděk 2019, comb. nov.
Creators: name: Bezděk, Jan
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Chrysomelidae
Taumacera
Taumacera clypeata

description: Taumacera clypeata (Baly, 1888), comb. nov.
Platyxantha clypeata Baly, 1888: 158 (original description)
Type material examined. SYNTYPES: 1 ♀, ‘Type [white round label with red collar, p] // ♀ [w, h] // Platyxantha / clypeata [w, h] // Baly Coll. [w, p]’ (BMNH); 1 ♂, ‘♂ [w, h] // Baly Coll. [w, p]’ (BMNH).
Comments. To date Platyxantha clypeata was classified in Acroxena (MAULIK 1936, WILCOX 1973). Based on the presence of a metasternal process and strongly modified head in the male syntype, I hereby transfer it to Taumacera and assign it to the T. nasuta species-group.
description: Published as part of Bezděk, Jan, 2019, Taumacera revisited, with new synonyms, new combinations and a revised catalogue of the species (Coleoptera: Chrysomelidae: Galerucinae), pp. 23-52 in Acta Entomologica Musei Nationalis Pragae (Acta. Ent. Mus. Natl. Pragae) (Acta. Ent. Mus. Natl. Pragae) 59 (1) on page 32, DOI: 10.2478/aemnp-2019-0003, http://zenodo.org/record/4505520
Plan 2040, NJTPA regional transportation plan for northern New Jersey
Creators: name: No Name Supplied
Publisher: name: No Publisher Supplied
Year: 2013

description: Plan 2040 takes a comprehensive look at the transportation infrastructure that binds the Northern New Jersey’s 13-county region together and makes recommendations for the future. It sets out a vision for the region’s transportation network over the next 25 years and ensures eligibility for federal transportation funding.
Oedemera (Oedemera) lurida subsp. lurida Marsham 1802
Creators: name: Ghahari, Hassan
name: Vázquez, Xavier A.
name: Kubisz, Daniel
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Oedemeridae
Oedemera
Oedemera lurida
Oedemera (oedemera) lurida lurida (marsham, 1802)

description: Oedemera (Oedemera) lurida lurida (Marsham, 1802)
Distribution in Iran. Alborz, Tehran (Švihla 1983), East Azarbaijan (Ghahari et al. 2012), Golestan, Mazandaran (Švihla 1983; Ghahari et al. 2012), Northern Khorasan (Švihla 1983), Razavi Khorasan (Ghahari & Jedryczkowski 2011), West Azarbaijan (Samin et al. 2015).
General distribution. Europe, Iran, Russia, Syria, Turkmenistan (Švihla 1999b, 2008a; Vázquez 2002; Montalto & Bologna 2011).
Chorotype. Turano-European.
Comments. Larvae feed on the root collar and lower part of the stem of perennial plant species, particularly Senecio, Eupatorium and Centaurea. Larvae overwinter in the root collar, imagines from May to August on flowers from different plants (over 30 plant genera) (Kubisz 2006; Ferenca et al. 2013).
description: Published as part of Ghahari, Hassan, Vázquez, Xavier A. & Kubisz, Daniel, 2017, Annotated checklist of the false blister beetles (Coleoptera: Tenebrionoidea: Oedemeridae) from Iran, pp. 321-334 in Zootaxa 4237 (2) on pages 328-329, DOI: 10.11646/zootaxa.4237.2.6, http://zenodo.org/record/343834
Sustainable economic development plan, Township of Mahwah, Bergen County, New Jersey
Creators: name: No Name Supplied
Publisher: name: No Publisher Supplied
Year: 2014

description: The study evaluated the existing conditions of the Township in terms of demographics, economics, land use, zoning and market potential. It included two outreach surveys, one for businesses and one for consumers. In the business survey respondents were asked to name advantages or strengths and challenges they associate with doing business in Mahwah, while in the customer survey, respondents were asked to name advantages and disadvantages to shopping in Mahwah. The study also examined Mahwah’s assets, challenges and opportunities as an economic hub by conducting a strengths, weaknesses, opportunities and threats (SWOT) analysis at a public community workshop. A study of Mahwah’s Retail Market Potential (RMP) was also conducted by reviewing data from The Nielsen Company’s RMP Opportunity Gap analysis which compares consumer expenditures versus retail sales in a given area. Based on this research, five main goals were established to support economic development, which were refined into action items and a matrix with responsibilities and timeframe for completion of each.
title: Carbon disclosures and information asymmetry: Empirical evidence on the importance of text in understanding numerical emission allowance disclosures
Creators: name: Steindl, Tobias
name: Habermann, Florian
name: Küster, Stephan
Publisher: name: Freie Universität Berlin
Year: 2024
Subjects: subject: carbon accounting
subject: climate change
subject: emission allowances
subject: emissions trading system
subject: industrial ecology
subject: information asymmetry
classificationCode: 330
subject: Wirtschaft

description: Carbon disclosures are essential for investors to evaluate firms’ efforts to combat climate change. In this study, we focus on a specific type of carbon disclosures—namely, emission allowance disclosures—that capture how firms implement emission reductions under the European Union emission trading system (EU ETS). Given the continuously changing institutional features of the EU ETS and the lack of authoritative guidance on how firms should account for emission allowances in their financial statements, it is exceedingly difficult for investors to understand numerical emission allowance disclosures and to compare them across—and even within—firms. Motivated by this criticism, we hypothesize and find that textual disclosures complementing numerical emission allowance disclosures are associated with lower information asymmetries between firms and their investors. Further analyses show that textual disclosures that: (i) describe the accounting approach, and (ii) contain institutional information on the EU ETS, respectively, are particularly important for improving the information environment of numerical emission allowance disclosures. Overall, our findings suggest that text can improve the understanding of numbers in a carbon disclosure context. Therefore, our study not only contributes to the (industrial ecology) literature but also has important implications for regulators, policymakers, investors, financial analysts, and firms.
Hackensack transit oriented development report
Creators: name: No Name Supplied
Publisher: name: No Publisher Supplied
Year: 2013

description: This report documents a community-based vision to bring transit oriented development to Hackensack. The project focuses on the areas surrounding Hackensack’s two NJ TRANSIT rail stations and its Bus Terminal. Future development around each is anticipated to help anchor the city’s retail core, complementing Hackensack’s recently adopted Rehabilitation Plan and strengthening the relationship of the downtown to the larger city and region. The project team reviewed background information and interviewed private and public sector parties familiar with retail, office and residential real estate markets. Using these resources, the team developed alternative scenarios for specific sites around the three transit nodes.
Planning for emerging centers; Union County sustainability corridor opportunities study
Creators: name: No Name Supplied
Publisher: name: No Publisher Supplied
Year: 2013

description: NJ TRANSIT has been studying the feasibility of a new Bus Rapid Transit (BRT) service along the NJ Route 28 corridor in Union County. The route, named the Union County Sustainability Corridor, would run on-street and make stops in Plainfield, Fanwood, Westfield, Garwood and Cranford. The introduction of a new transit service – such as BRT - could provide significant economic development opportunities to the communities along the route, both at the local and corridor levels. The purpose of the study was to work with each community to identify places within ½ mile of the proposed route that 1) have the capacity for development; 2) could attract uses for which there is market demand; and 3) could attract uses which would support and benefit enhanced transit. The result is an analysis of demographics, economics and land use that illustrates opportunities for economic development within each community and as a greater corridor, supported by and supporting enhanced transit.
Additional file 11: of Imiquimod has strain-dependent effects in mice and does not uniquely model human psoriasis
Creators: name: Swindell, William
name: Michaels, Kellie
name: Sutter, Andrew
name: Diaconu, Doina
name: Fritz, Yi
name: Xianying Xing
name: Sarkar, Mrinal
name: Liang, Yun
name: Tsoi, Alex
name: Gudjonsson, Johann
name: Ward, Nicole
Publisher: name: Figshare
Year: 2017
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy

description: Genes uniquely altered by IMQ in MOLF males. (PDF 1511 kb)
Strobiligera undefined-A
Creators: name: Fernandes, Maurício Romulo
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Triphoridae
Strobiligera
Strobiligera undefined-A

description: Strobiligera sp. A
Fig. 10
Material examined
GUADELOUPE (Karubenthos 2 expedition) • 1 sh; stn CP4513; MNHN • 1 sh; stn DW4549; MNHN • 1 sh; stn DW4550; MNHN • 1 sh; stn DW4599; MNHN.
Description
Shell sinistral, conical-fusiform, up to 5.0 mm long, 1.1 mm wide, apical angle of early whorls 14–15°. Protoconch paucispiral, sub-columnar, 3.0–3.25 whorls, 0.59–0.73 mm long, 0.38–0.47 mm wide; small nucleus rises in an adapical direction and further goes abapical in an oblique descent; two main smooth spiral cords, similarly-sized, situated at 37–44% and 71–77% of last whorl height, in addition to a very narrow subsutural cord; gradual transition to teleoconch, from a smooth spiral sculpture to a nodulous one. Teleoconch with up to 11 whorls; three main spiral cords (continuous to those of protoconch), adapical one initially strongly reduced, gradually strengthening and reaching same size as other cords between sixth and eighth whorls; suture shallow, with a very thin sutural cord; 18 orthocline to slightly opisthocline axial ribs on ninth teleoconch whorl; medium-sized, nearly rounded to slightly elliptical nodules; base apparently not fully developed. Shell white.
Remarks
Strobiligera sp. A is currently known from small and often worn shells, of up to 5.0 mm in length, although it is uncertain whether the largest shell (Fig. 10E) is adult or juvenile. It differs from S. cf. enopla in the earlier full development of the adapical spiral cord of the teleoconch and in the first protoconch whorl (not slightly inflated, as observed in most shells of S. cf. enopla). The shell of Strobiligera sp. A is completely white, contrasting with the brown adapical spiral cord in the teleoconch of S. picta sp. nov. Adult shells are required to confirm this as a new species.
Geographic distribution
Guadeloupe.
Bathymetric distribution
262–644 m (empty shells).
description: Published as part of Fernandes, Maurício Romulo, 2024, The deep-sea species of Triphoridae (Gastropoda, Triphoroidea) from Guadeloupe, sampled by the Karubenthos 2 expedition, pp. 1-52 in European Journal of Taxonomy 972 on pages 19-21, DOI: 10.5852/ejt.2024.972.2763, http://zenodo.org/record/14506799
title: Lipid switches in the immunological synapse
Creators: name: Griffiths, Gillian
name: Brügger, Britta
name: Freund, Christian
Publisher: name: Freie Universität Berlin
Year: 2024
Subjects: subject: T cell
subject: immunological synapse
subject: phosphoinositides
subject: S-acylation
subject: palmitoylation
subject: DHHC enzymes
classificationCode: 570
subject: Biowissenschaften; Biologie

description: Adaptive immune responses comprise the activation of T cells by peptide antigens that are presented by proteins of the Major Histocompatibility Complex (MHC) on the surface of an antigen-presenting cell. As a consequence of the T cell receptor interacting productively with a certain peptide-MHC complex, a specialized cell-cell junction known as the immunological synapse forms and is accompanied by changes in the spatiotemporal patterning and function of intracellular signaling molecules. Key modifications occurring at the cytoplasmic leaflet of the plasma and internal membranes in activated T cells comprise lipid switches that affect the binding and distribution of proteins within or near the lipid bilayer. Here, we describe two major classes of lipid switches that act at this critical water/membrane interface. Phosphoinositides are derived from phosphatidylinositol, an amphiphilic molecule that contains two fatty acid chains and a phosphate group that bridges the glycerol backbone to the carbohydrate inositol. The inositol ring can be variably (de-)phosphorylated by dedicated kinases and phosphatases, thereby creating phosphoinositide signatures that define the composition and properties of signaling molecules, molecular complexes, or whole organelles. Palmitoylation refers to the reversible attachment of the fatty acid palmitate to a substrate protein’s cysteine residue. DHHC enzymes, named after the four conserved amino acids in their active site, catalyze this post-translational modification and thereby change the distribution of proteins at, between, and within membranes. T cells utilize these two types of molecular switches to adjust their properties to an activation process that requires changes in motility, transport, secretion, and gene expression.
Data from: Integrating deep learning derived morphological traits and molecular data for total-evidence phylogenetics: lessons from digitized collections
Creators: name: Hunt, Roberta
name: Reyes-Hernández, José L.
name: Shaw, Josh Jenkins
name: Solodovnikov, Alexey
name: Pedersen, Kim Steenstrup
Publisher: name: Zenodo
Year: 2024
Subjects: Phylogenetics
deep representation learning
pinned insects
Cladistics
total evidence analysis
Image analysis
Neural networks
continuous morphological traits
Deep metric learning

description: Deep learning has previously shown success in automatically generating morphological traits which carry a phylogenetic signal. In this paper, we explore combining molecular data with deep learning derived morphological traits from images of pinned insects to generate total-evidence phylogenies and we reveal challenges. Deep learning derived morphological traits, while informative, underperform when used in isolation compared to molecular analyses. However, they can improve molecular results in total evidence settings. We use a dataset of rove beetle images to compare the effect of different dataset splits and deep metric loss functions on morphological and total evidence results. We find a slight preference for the cladistic dataset split and contrastive loss function. Additionally, we explore the effect of varying the number of genes used in inference and find that different gene combinations provide the best results when used on their own vs in total evidence analysis. Despite the promising nature of integrating deep learning techniques with molecular data, challenges remain regarding the strength of the phylogenetic signal and the resource demands of data acquisition. We suggest that future work focus on improved trait extraction and the development of disentangled networks to better interpret the derived traits, thus expanding the applicability of these methods in phylogenetic studies.
description: Funding provided by: University of CopenhagenROR ID: https://ror.org/035b05819Award Number:
Funding provided by: The Velux FoundationsROR ID: https://ror.org/007ww2d15Award Number:
description: Images of specimens associated with this dataset can be found in the Rove-Tree-11 dataset (https://doi.org/10.17894/ucph.39619bba-4569-4415-9f25-d6a0ff64f0e3).

Molecular data was gathered from Genbank and aligned using MAFFT 7. Original Genbank accession numbers are provided. Alignments were concatenated with FASconCAT-G. Partition scheme and model selection were obtained using PartitionFinder 2.1.1. 

Trees were obtained via Maximum Parsimony using TNT. Example TNT scripts are provided.
title: SoK: The past decade of user deception in emails and today’s email clients’ susceptibility to phishing techniques
Creators: name: Veit, Maxime Fabian
name: Wiese, Oliver
name: Ballreich, Fabian Lucas
name: Volkamer, Melanie
name: Engels, Douglas
name: Mayer, Peter
Publisher: name: Freie Universität Berlin
Year: 2025
Subjects: subject: Email
subject: Email clients
subject: Deception Techniques
subject: Phishing Attacks
subject: Human-Computer Interaction
subject: Secure Mobile User Interfaces
subject: Systemization of Knowledge
classificationCode: 004
subject: Datenverarbeitung; Informatik

description: User deception in emails is still one of the biggest security risks companies and end-users face alike. Attackers try to mislead their victims when assessing whether emails are dangerous to interact with, e.g., by using techniques based on dangerous links, dangerous attachments, or both. In this work, we present a systematic literature research of deception techniques discussed in the scientific literature of the last decade. We systematize the deception techniques, focusing on techniques that use misleading sender, link, and/or attachment information. We identify 23 deception techniques which we classify as either those that email clients should protect users against (13) and those that email clients cannot protect against and thus should be addressed in security awareness measures (10). We propose a security rating for the susceptibility of email clients to these 13 deception techniques and perform an empirical evaluation to analyze the susceptibility of seven representative email clients (web, mobile apps, desktop apps) to these deception techniques. The results of our evaluation indicate that most email clients are in need of improvement to defend against the deception techniques. Hardening email clients against these deception techniques is necessary to increase the resistance against them — without unnecessarily burdening users.
Taumacera constricta Mohamedsaid 2002
Creators: name: Bezděk, Jan
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Chrysomelidae
Taumacera
Taumacera constricta

description: Taumacera constricta Mohamedsaid, 2002
Taumacera constricta Mohamedsaid, 2002: 218 (original description)
Additional material examined. INDONESIA: SUMATRA: Soekaranda, 1894, 2♀♀, Dohrn leg. (ZMHB); Soekaranda, 1♀, Dohrn leg. (ZMHB).
Comments. All three specimens collected in Sumatra were erroneously labelled as cotypes of Metellus fulvicollis, which was described from Java.
description: Published as part of Bezděk, Jan, 2019, Taumacera revisited, with new synonyms, new combinations and a revised catalogue of the species (Coleoptera: Chrysomelidae: Galerucinae), pp. 23-52 in Acta Entomologica Musei Nationalis Pragae (Acta. Ent. Mus. Natl. Pragae) (Acta. Ent. Mus. Natl. Pragae) 59 (1) on page 32, DOI: 10.2478/aemnp-2019-0003, http://zenodo.org/record/4505520
Taumacera costatipennis
Creators: name: Bezděk, Jan
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Chrysomelidae
Taumacera
Taumacera costatipennis

description: Taumacera costatipennis (Jacoby, 1896)
(Fig. 72)
Metellus costatipennis Jacoby, 1896a: 498 (original description)
Type material examined. SYNTYPES: 1 ♀, ‘Type / H. T. [white round label with red collar, p] // SUMATRA / SI-RAMBÉ / XII.90-III.91 / E. MODIGLIANI [w, p] // Jacoby Coll. / 1909-28a [w, p] // Metellus / costatipennis / Jac [b, h] // SYN- / TYPE [white round label with pale blue collar, p]’ (BMNH); 1 ♀, ‘ SUMATRA / SI-RAMBÉ / XII.90-III.91 / E. MODIGLIANI [w, p] // Museo Civ. / Genova [y, p] // 105 [pink, p] // Jacoby Coll. / 1909-28a [w, p] // SYN- / TYPE [white round label with pale blue collar, p]’ (BMNH); 1 ♀, ‘ SUMATRA / SI-RAMBÉ / XII.90-III.91 / E. MODIGLIANI [w, p] // 96-64. [w, p] // SYN- / TYPE [white round label with pale blue collar, p]’ (BMNH); 1 ♀, ‘ SUMATRA / SI-RAMBÉ / XII.90-III.91 / E. MODIGLIANI [w, p] // 96-65. [w, p] // SYN- / TYPE [white round label with pale blue collar, p]’ (BMNH); 1 ♂, ‘ SUMATRA / SI-RAMBÉ / XII.90-III.91 / E. MODIGLIANI [w, p] // 96-65. [w, p] // Metellus / costatipennis / n. sp. Jac. / ♂ ♀ [w, h] // SYN- / TYPE [white round label with pale blue collar, p]’ (BMNH); 1 ♂, ‘ SUMATRA / SI-RAMBÉ / XII.90-III.91 / E. MODIGLIANI [w, p] // Typus [w, p, red letters] // costatipennis / ♂ Jac. [w, h] // Metellus / costatipennis / ♂ Jac. [b, h]’ (MSNG).
Additional material examined. INDONESIA: SUMATRA: Sibaya Mt., 13.ii.1994, 1 ♂, H. Takizawa leg. (HMHJ); Sibuatang Mt., 12.ii.1994, 1 ♀, H. Takizawa leg. (HMHJ).
description: Published as part of Bezděk, Jan, 2019, Taumacera revisited, with new synonyms, new combinations and a revised catalogue of the species (Coleoptera: Chrysomelidae: Galerucinae), pp. 23-52 in Acta Entomologica Musei Nationalis Pragae (Acta. Ent. Mus. Natl. Pragae) (Acta. Ent. Mus. Natl. Pragae) 59 (1) on page 32, DOI: 10.2478/aemnp-2019-0003, http://zenodo.org/record/4505520
MOESM1 of Metabolic engineering of Saccharomyces cerevisiae to produce a reduced viscosity oil from lignocellulose
Creators: name: Tran, Tam
name: Breuer, Rebecca
name: Ragothaman Avanasi Narasimhan
name: Parreiras, Lucas
name: Yaoping Zhang
name: Sato, Trey
name: Durrett, Timothy
Publisher: name: Figshare
Year: 2017
Subjects: subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified

description: Additional file 1: Figure S1. Elimination of lcTAG synthesis and expression of EaDAcT does not affect growth on YPD. Cell density (C.D.; solid lines) and extracellular glucose concentrations (Glc; dashed lines) from indicated strains cultured aerobically in bioreactors containing YPD media. Values displayed are the mean Âą S.D. from three independent biological replicates. Figure S2. Acetyl-TAG producing yeast strains can consume and grow on xylose. Cell density (C.D.; solid lines) and extracellular xylose concentrations (Xyl; dashed lines) from indicated strains cultured aerobically in bioreactors containing YPX media. Values displayed are the mean Âą S.D. from three independent biological replicates. Figure S3. Acetyl-TAG producing yeast strains consume sugars in ACSH similarly to wild-type cells. Cell density (C.D.; solid lines) and concentrations of extracellular glucose (Glc; dashed lines) and xylose (Xyl; dashed lines) from indicated strains cultured aerobically in bioreactors containing ACSH. Values displayed are the mean Âą S.D. from three independent biological replicates. Table S1. S. cerevisiae strains used in this study. Table S2. Primers used for genetic engineering.
Temporal patterns of short non-coding RNA modifications and expression
Creators: name: Naqvi, Ammar S.
Publisher: name: No Publisher Supplied
Year: 2015

description: We investigated the function and properties of small RNAs, particularly microRNAs and tRNA-derived fragments (tRFs) with age. We report the characterization of a novel 3'-to- 5' exonuclease, Nibbler (Nbr), that generates differing isoforms of miRNAs in Drosophila.. We developed a robust approach to help identify and characterize 3' heterogeneity in microRNAs controlled by Nbr, which assisted in identifying age- associated traits, including neurodegeneration and lifespan. Subsequently, given the fact Nbr interacts with Ago1 and not Ago2, we observed an accumulation of certain isoforms, which lead us to ask if there were particular patterns and trends that were Ago-specific. Interestingly, we report a novel age-associated change of select isoforms with age that is Ago2 specific. RNA deep-sequencing analysis coupled with experimental evidence reflected an increased loading of miRNA isoforms into Ago2 with age. Essentially, the loss of methylated miRNAs led to accelerated brain degeneration and shortened lifespan. Intriguingly, we also observed and identified Ago-loaded tRFs, which appear to have properties similar to those of miRNAs. We found this class of small RNAs to also display age-associated changes. For the first time, we found that differentially loaded Drosophila tRFs mapping to both nuclear and mitochondrial tRNA genes associating with all 20 amino acids. These tRFs show a number of similarities with miRNAs, including seed sequences, suggesting a similar role and function. Moreover, we further characterized and predicted targets for these tRFs and show a significant enrichment in development and neuronal function, suggesting a role in brain-related processes with age. In sum, we discovered a novel component of the canonical microRNA biogenesis pathway, responsible for the generation of multiple isoforms. We also connected specific age- associated patterns and trends of select microRNA isoforms, which were found to impact proper brain development and lifespan. Moreover, we identified differentially loaded tRFs and elucidated their structures, loading, and expression patterns, which corresponded closely with microRNAs. Finally, we were able to identify tRF seed regions that potentially play a role in brain activity or brain changes with age.
Taumacera coxalis Bezděk 2019, comb. nov.
Creators: name: Bezděk, Jan
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Chrysomelidae
Taumacera
Taumacera coxalis

description: Taumacera coxalis (Jacoby, 1899), comb. nov.
(Fig. 96)
Platyxantha coxalis Jacoby, 1899: 298 (original description)
Type material examined. SYNTYPES: 1 ♀, ‘Type / H. T. [white round label with red collar, p] // Dohrn / Sumatra / Soekaranda [w, p] // Jacoby Coll. / 1909-28a [w, p] // Platyxantha / coxalis Jac [b, h]’ (BMNH); 1 ♀, ‘Soekaranda / Januar 1894 / Dohrn [w, p] // Jacoby Coll. / 1909-28a [w, p] // coxalis Jac [grey label, w]’ (BMNH).
Comments. The species was unknown to subsequent specialists and was mentioned only in catalogues. WEISE (1924) listed it as Platyxantha (Haplotes) coxalis while WILCOX (1973) and KIMOTO (1990) classified it in the genus Polexima.
In the BMNH I found two female syntypes of Platyxantha coxalis which do not correspond with Jacobyʼs description as he mentioned only males (JACOBY 1899). In my opinion, this discrepancy can be easily explained by the structure of antennae. Both females have slightly thickened apical antennomeres (Fig. 96) which probably led Jacoby to treat them as males. Although the males are unknown to me I have no doubt that Platyxantha coxalis belongs to Taumacera based on habitus and the absence of tibial spurs.
description: Published as part of Bezděk, Jan, 2019, Taumacera revisited, with new synonyms, new combinations and a revised catalogue of the species (Coleoptera: Chrysomelidae: Galerucinae), pp. 23-52 in Acta Entomologica Musei Nationalis Pragae (Acta. Ent. Mus. Natl. Pragae) (Acta. Ent. Mus. Natl. Pragae) 59 (1) on page 33, DOI: 10.2478/aemnp-2019-0003, http://zenodo.org/record/4505520
The relationship between parental monitoring and marijuana non-use among African American and Latino adolescents
Creators: name: Nilsen, Madison
Publisher: name: No Publisher Supplied
Year: 2015

description: Previous research has found that parental monitoring is a primary protective factor against adolescent marijuana use. However, most research has approached it from a deficit perspective focusing on this substance as a small component in conjunction with other drugs and deviant behaviors. This study utilizes survey data to examine the relationship between parental monitoring and marijuana non-use among 249 African American and Latino adolescents. Social control theory is applied as a framework to understand the relationship between parental monitoring and an individual’s choice to avoid marijuana. Results indicate that younger adolescents, females, non-African Americans, and increased parental monitoring have statistically significant relationships with marijuana non-use. Findings are important to stakeholders and community leaders in implementing prevention drug programs within inner city neighborhoods.
Identifying the molecular mechanism and genetic region for habitat specific clock variation in N.discreta PS4B
Creators: name: Pachucki, Ryan J.
Publisher: name: No Publisher Supplied
Year: 2015

description: The 24-hour biological rhythm, or circadian rhythm, has been attributed as a fitness trait in multiple organisms. [1][2][3] To identify how organisms adapted their circadian rhythms to increase their fitness, we used a global population from the Neurospora discreta complex. Under cycling light conditions, North American strains in N. discreta PS4B exhibit no rhythms in their sporulation output. To understand the molecular variation of the oscillator underlying these divergent phenotypes, we analyzed the expression of the key clock protein FREQUENCY and found FRQ levels have a rhythm in constant conditions. Based on our findings, we concluded that the North American strains in the N. discreta PS4B population have decoupled their developmental rhythm from their molecular oscillator to enhance their fitness. Our mathematical model supports the hypothesis that North American strains have increased their fitness by decreasing their coupling coefficient and threshold.  In addition, we found the candidate region for habitat specific clock variation (HSCV) occurs on chromosome 3. In an intercontinental F1 population, we observed an opposite allele effect, resulting in strains with the North American phenotype having the African parent allele. To understand the mechanism and components of another oscillator, we used the strain PRD-1, which is hypothesized in the literature to be a key component of the metabolic oscillator. We have observed arrhythmic ATP oscillation in PRD-1 compared to WT strains.