cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
BerniMotaBMPRhodniusSuppFigure4REV.pdf from A pro-BMP function exerted by Rhodnius prolixus short gastrulation reveals great diversity in the role of BMP modulators during embryonic patterning
Creators: name: Berni, M.
name: Mota, J.
name: Bressan, D.
name: Ribeiro, L.
name: Martins, G.
name: Pereira, J.
name: Ramos, I.
name: Nunes-da-Fonseca, R.
name: Araujo, H.
Publisher: name: The Royal Society
Year: 2023
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Developmental Biology

description: Dorsal–Ventral (DV) patterning is regulated by the Bone Morphogenetic Pathway (BMP) in Bilateria. In insect DV patterning, the Toll pathway also plays a role, in addition to BMPs. Variations in the relative importance of each pathway for DV patterning have been reported using single species of coleopteran, hymenopteran, hemipteran and orthopteran insects. To investigate if the molecular control of DV patterning is conserved inside an insect order, the emergent model hemiptera species Rhodnius prolixus was studied. We found that R. prolixus BMP pathway controls the entire DV axis, with a broader effect respective to Toll, as shown for the hemiptera Oncopeltus fasciatus. Different from O. fasciatus, the unique R. prolixus short gastrulation (sog) and the twisted gastrulation (tsg) orthologues do not antagonize, but rather favour embryonic BMP signalling. Our results reinforce the hypothesis that hemiptera rely preferentially on BMPs for DV patterning but that, surprisingly, in R. prolixus Sog and Tsg proteins exert only a positive role to establish a dorsal-to-ventral BMP gradient. Since sog has been reported to be lost from orthopteran and hymenopteran genomes, our results indicate that Sog's role to modify BMP activity varies greatly in different insect species.
Additional file 2 of Circular RNA detection identifies circPSEN1 alterations in brain specific to autosomal dominant Alzheimer's disease
Creators: name: Chen, Hsiang-Han
name: Eteleeb, Abdallah
name: Wang, Ciyang
name: Fernandez, Maria Victoria
name: Budde, John P.
name: Bergmann, Kristy
name: Norton, Joanne
name: Wang, Fengxian
name: Ebl, Curtis
name: Morris, John C.
name: Perrin, Richard J.
name: Bateman, Randall J.
name: McDade, Eric
name: Xiong, Chengjie
name: Goate, Alison
name: Farlow, Martin
name: Chhatwal, Jasmeer
name: Schofield, Peter R.
name: Chui, Helena
name: Harari, Oscar
name: Cruchaga, Carlos
name: Ibanez, Laura
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 2. Supplementary Fig. S1.
Expanded description of Nihohae matakoi from A new dolphin with tusk-like teeth from the late Oligocene of New Zealand indicates evolution of novel feeding strategies
Creators: name: Coste, Ambre
name: Fordyce, R. Ewan
name: Loch, Carolina
Publisher: name: The Royal Society
Year: 2023
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 40308 Palaeontology (incl. Palynology)
subject: FOS: Earth and related environmental sciences
subject: 60301 Animal Systematics and Taxonomy
subject: 60310 Plant Systematics and Taxonomy

description: Expanded description of Nihohae matakoi
Supplementary Figure 6 from A pro-BMP function exerted by Rhodnius prolixus short gastrulation reveals great diversity in the role of BMP modulators during embryonic patterning
Creators: name: Berni, M.
name: Mota, J.
name: Bressan, D.
name: Ribeiro, L.
name: Martins, G.
name: Pereira, J.
name: Ramos, I.
name: Nunes-da-Fonseca, R.
name: Araujo, H.
Publisher: name: The Royal Society
Year: 2023
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Developmental Biology

description: Dorsal–ventral (DV) patterning is regulated by the bone morphogenetic pathway (BMP) in Bilateria. In insect DV patterning, the Toll pathway also plays a role, in addition to BMPs. Variations in the relative importance of each pathway for DV patterning have been reported using single species of coleopteran, hymenopteran, hemipteran and orthopteran insects. To investigate if the molecular control of DV patterning is conserved inside an insect order, the emergent model hemiptera species Rhodnius prolixus was studied. We found that R. prolixus BMP pathway controls the entire DV axis, with a broader effect respective to Toll, as shown for the hemiptera Oncopeltus fasciatus. Different from O. fasciatus, the unique R. prolixus short gastrulation (sog) and the twisted gastrulation (tsg) orthologues do not antagonize, but rather favour embryonic BMP signalling. Our results reinforce the hypothesis that hemiptera rely preferentially on BMPs for DV patterning but that, surprisingly, in R. prolixus Sog and Tsg proteins exert only a positive role to establish a dorsal-to-ventral BMP gradient. Since sog has been reported to be lost from orthopteran and hymenopteran genomes, our results indicate that Sog's role to modify BMP activity varies greatly in different insect species.
Additional file 3 of Circular RNA detection identifies circPSEN1 alterations in brain specific to autosomal dominant Alzheimer's disease
Creators: name: Chen, Hsiang-Han
name: Eteleeb, Abdallah
name: Wang, Ciyang
name: Fernandez, Maria Victoria
name: Budde, John P.
name: Bergmann, Kristy
name: Norton, Joanne
name: Wang, Fengxian
name: Ebl, Curtis
name: Morris, John C.
name: Perrin, Richard J.
name: Bateman, Randall J.
name: McDade, Eric
name: Xiong, Chengjie
name: Goate, Alison
name: Farlow, Martin
name: Chhatwal, Jasmeer
name: Schofield, Peter R.
name: Chui, Helena
name: Harari, Oscar
name: Cruchaga, Carlos
name: Ibanez, Laura
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 3. Supplementary Fig. S2.
title: Χωροταξική οργάνωση αποθηκών
title: Warehouse layout
titleType: AlternativeTitle
Creators: name: Μπεθάνη, Κωνσταντίνα
Publisher: name: Πανεπιστήμιο Πειραιώς
Year: 2023
Subjects: subject: Logistics
subject: Συστήματα
subject: Αποθήκη
subject: Αποθέματα
subject: Διανομή
subject: Systems
subject: Warehouse
subject: Inventories
subject: Distribution

description: Τα τελευταία χρόνια ο τομέας των logistics προσελκύει το ενδιαφέρον όλο και περισσότερων ανθρώπων που δραστηριοποιούνται στον χώρο των επιχειρήσεων. Στόχος μας μέσα από τη παρούσα εργασία είναι να παρακολουθήσουμε την πορεία των logistics μέσα σε όλες τις λειτουργίες μιας επιχείρησης ή ενός οργανισμού όπου εφαρμόζονται. Η παρουσία τους στην αγορά είναι καθημερινή και περιλαμβάνεται σε όλες τις συναλλαγές μας, από την πιο μικρή έως την πιο μεγάλη, με την τάση της αγοράς να δείχνει περαιτέρω άνοδο για τον τομέα αυτό στο μέλλον. Ιδιαιτέρως, όταν αυξάνεται το μέγεθος των επιχειρήσεων η παρουσία ενός οργανωμένου συστήματος logistics κρίνεται κάτι παραπάνω από απαραίτητη. Επιχειρήσεις οι οποίες διατηρούν μεγάλες αποθήκες και διαθέτουν πλήθος εμπορευμάτων και κωδικών στις αποθήκες τους είναι υποχρεωμένες να εφαρμόζουν καλή οργάνωση στον τομέα αυτό ώστε να διατηρούν αυξημένη την παραγωγικότητα τους. Η παρουσία των logistics μέσα στις επιχειρήσεις εκτός από τις αποθήκες περιλαμβάνουν και μια σειρά άλλων λειτουργιών όπως είναι η διαχείριση των αποθεμάτων, τα μηχανήματα, η διανομή, τα ηλεκτρονικά συστήματα και το ανθρώπινο δυναμικό. Μεγαλύτερη αναφορά πραγματοποιείται για τις ιδιωτικές επιχειρήσεις, παρόλα που τα συστήματα των logistics χρησιμοποιούνται εξίσου με σημαντικό ρόλο και στις δημόσιες επιχειρήσεις. Μέσα από την παρούσα εργασία θα παρουσιάσουμε τη διοίκηση των logistics (εφοδιαστική αλυσίδα) σε όλα τα άτομα που ενδιαφέρονται να μάθουν για τις θεμελιώδεις πτυχές τους, καθώς και σε όσους τα χρησιμοποιούν ήδη και θέλουν να μάθουν περισσότερα. Καταλήγοντας στο αποτέλεσμα της εργασίας μας θέλουμε να τονίσουμε πόσο σημαντικός είναι ο τομέας των logistics για τις επιχειρήσεις και τους οργανισμούς. Δίχως αυτά η ορθή λειτουργία και εξέλιξη των επιχειρήσεων στη σύγχρονη αγορά θα ήταν αδύνατη.
BerniMotaBMPRhodniusSuppFigure2REV.pdf from A pro-BMP function exerted by Rhodnius prolixus short gastrulation reveals great diversity in the role of BMP modulators during embryonic patterning
Creators: name: Berni, M.
name: Mota, J.
name: Bressan, D.
name: Ribeiro, L.
name: Martins, G.
name: Pereira, J.
name: Ramos, I.
name: Nunes-da-Fonseca, R.
name: Araujo, H.
Publisher: name: The Royal Society
Year: 2023
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Developmental Biology

description: Dorsal–Ventral (DV) patterning is regulated by the Bone Morphogenetic Pathway (BMP) in Bilateria. In insect DV patterning, the Toll pathway also plays a role, in addition to BMPs. Variations in the relative importance of each pathway for DV patterning have been reported using single species of coleopteran, hymenopteran, hemipteran and orthopteran insects. To investigate if the molecular control of DV patterning is conserved inside an insect order, the emergent model hemiptera species Rhodnius prolixus was studied. We found that R. prolixus BMP pathway controls the entire DV axis, with a broader effect respective to Toll, as shown for the hemiptera Oncopeltus fasciatus. Different from O. fasciatus, the unique R. prolixus short gastrulation (sog) and the twisted gastrulation (tsg) orthologues do not antagonize, but rather favour embryonic BMP signalling. Our results reinforce the hypothesis that hemiptera rely preferentially on BMPs for DV patterning but that, surprisingly, in R. prolixus Sog and Tsg proteins exert only a positive role to establish a dorsal-to-ventral BMP gradient. Since sog has been reported to be lost from orthopteran and hymenopteran genomes, our results indicate that Sog's role to modify BMP activity varies greatly in different insect species.
BerniMotaBMPRhodniusSuppFigure6REV.pdf from A pro-BMP function exerted by Rhodnius prolixus short gastrulation reveals great diversity in the role of BMP modulators during embryonic patterning
Creators: name: Berni, M.
name: Mota, J.
name: Bressan, D.
name: Ribeiro, L.
name: Martins, G.
name: Pereira, J.
name: Ramos, I.
name: Nunes-da-Fonseca, R.
name: Araujo, H.
Publisher: name: The Royal Society
Year: 2023
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Developmental Biology

description: Dorsal–Ventral (DV) patterning is regulated by the Bone Morphogenetic Pathway (BMP) in Bilateria. In insect DV patterning, the Toll pathway also plays a role, in addition to BMPs. Variations in the relative importance of each pathway for DV patterning have been reported using single species of coleopteran, hymenopteran, hemipteran and orthopteran insects. To investigate if the molecular control of DV patterning is conserved inside an insect order, the emergent model hemiptera species Rhodnius prolixus was studied. We found that R. prolixus BMP pathway controls the entire DV axis, with a broader effect respective to Toll, as shown for the hemiptera Oncopeltus fasciatus. Different from O. fasciatus, the unique R. prolixus short gastrulation (sog) and the twisted gastrulation (tsg) orthologues do not antagonize, but rather favour embryonic BMP signalling. Our results reinforce the hypothesis that hemiptera rely preferentially on BMPs for DV patterning but that, surprisingly, in R. prolixus Sog and Tsg proteins exert only a positive role to establish a dorsal-to-ventral BMP gradient. Since sog has been reported to be lost from orthopteran and hymenopteran genomes, our results indicate that Sog's role to modify BMP activity varies greatly in different insect species.
Supplementary figures 1 to 5 from A new dolphin with tusk-like teeth from the late Oligocene of New Zealand indicates evolution of novel feeding strategies
Creators: name: Coste, Ambre
name: Fordyce, R. Ewan
name: Loch, Carolina
Publisher: name: The Royal Society
Year: 2023
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 40308 Palaeontology (incl. Palynology)
subject: FOS: Earth and related environmental sciences
subject: 60301 Animal Systematics and Taxonomy
subject: 60310 Plant Systematics and Taxonomy

description: Supplementary figures of locality (1), extra skull views(2), all loose teeth (3), Postcranial material (4&5)
Additional file 4 of Circular RNA detection identifies circPSEN1 alterations in brain specific to autosomal dominant Alzheimer's disease
Creators: name: Chen, Hsiang-Han
name: Eteleeb, Abdallah
name: Wang, Ciyang
name: Fernandez, Maria Victoria
name: Budde, John P.
name: Bergmann, Kristy
name: Norton, Joanne
name: Wang, Fengxian
name: Ebl, Curtis
name: Morris, John C.
name: Perrin, Richard J.
name: Bateman, Randall J.
name: McDade, Eric
name: Xiong, Chengjie
name: Goate, Alison
name: Farlow, Martin
name: Chhatwal, Jasmeer
name: Schofield, Peter R.
name: Chui, Helena
name: Harari, Oscar
name: Cruchaga, Carlos
name: Ibanez, Laura
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 4. Supplementary Fig. S3.
title: Art, affect and critical theory : The case of fiction
Creators: name: Rosebury, B. J
Publisher: name: University of Kent
Year: 2023

description: The central argument propounded by the thesis, and tested -with due acknowledgement of the non-exhaustiveness of the test- against the case of fiction, is that the nature and function of art is simultaneously to quicken and order desire. The experience of art is not, in any simple sense, emotionally satisfying or cathartic: rather art energises our latent desires (and, conversely, aversions), and compensates us for the dissatisfaction it thus engenders by implicating our desires in aesthetic structures which, internalised by the mind as we progressively apprehend the work, constitute a temporary promise or paradigm of possible psychological governance over desire. A number of prevalent critical presuppositions stand in evident antagonism (partial or complete) to the application of this hypothesis to fiction. Four categories of objection are anticipated, and considered at both a theoretical and a practical level: the critical positions from which they are derived -historical and moral realism, language-oriented criticism, and anti-affectivist theory- are shown to be partially flawed, and in respects which precisely bear upon their implicit antagonism to the central argument. Once these flaws have been excised, and the central argument reaffirmed, a coherent and non-reductive critical programme is exposed. An extended analysis of a specimen novel (Wuthering Heights) seeks to demonstrate both the fertility and the thoroughness of the critical techniques endorsed by that programme.
Colydium noblecourti Parmain, Eckelt & Schuh, 2024 (Coleoptera: Zopheridae) – nowy dla fauny Polski gatunek chrząszcza
Creators: name: Rafał Ruta
name: Dawid Marczak
name: Radosław Mroczyński
name: Adam Kwiatkowski
Publisher: name: Zenodo
Year: 2025
Subjects: Tenebrionoidea, new records, distribution, saproxylic beetles, Poland

description: Colydium noblecourti Parmain, Eckelt & Schuh, 2024 (Coleoptera: Zopheridae) – new beetle species for the fauna of Poland.Colydium noblecourti is recorded from Poland for the first time. Notes on other species of Colydium occurring in Poland are provided and some published records are corrected. All data on the occurrence of C. elongatum in Poland need to be verified.
Potential new higher-level products for Copernicus water research
Creators: name: Laas, Alo
name: Soomets, Tuuli
name: Toming, Kaire
name: Kutser, Tiit
Publisher: name: Zenodo
Year: 2024

description: The objective of Water-ForCE project WP4 (Aligning in situ and satellite Earth observation activities), Deliverable 4.5 was to analys the user needs and currently available technical capabilities of different in situ sampling sensors to provide new higher-level biogeochemical products that could potentially be measured by combining different in situ sensors and satellite earth observation data.
Additional file 5 of Circular RNA detection identifies circPSEN1 alterations in brain specific to autosomal dominant Alzheimer's disease
Creators: name: Chen, Hsiang-Han
name: Eteleeb, Abdallah
name: Wang, Ciyang
name: Fernandez, Maria Victoria
name: Budde, John P.
name: Bergmann, Kristy
name: Norton, Joanne
name: Wang, Fengxian
name: Ebl, Curtis
name: Morris, John C.
name: Perrin, Richard J.
name: Bateman, Randall J.
name: McDade, Eric
name: Xiong, Chengjie
name: Goate, Alison
name: Farlow, Martin
name: Chhatwal, Jasmeer
name: Schofield, Peter R.
name: Chui, Helena
name: Harari, Oscar
name: Cruchaga, Carlos
name: Ibanez, Laura
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 5. Supplementary Fig. S4.
Unpruned tree from A new dolphin with tusk-like teeth from the late Oligocene of New Zealand indicates evolution of novel feeding strategies
Creators: name: Coste, Ambre
name: Fordyce, R. Ewan
name: Loch, Carolina
Publisher: name: The Royal Society
Year: 2023
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 40308 Palaeontology (incl. Palynology)
subject: FOS: Earth and related environmental sciences
subject: 60301 Animal Systematics and Taxonomy
subject: 60310 Plant Systematics and Taxonomy

description: Unpruned phylogenetic analysis of N. matakoi, 50% majority consensus tree unweighted analysis
EVALUATING THE READINESS OF THE OUT-OF-HOME ADVERTISING INDUSTRY FOR THE FOURTH INDUSTRIAL REVOLUTION
Creators: name: Emily, Patel
Publisher: name: SADI journals
Year: 2024
Subjects: Advertising
out of home
fourth industrial revolution
emerging technologies
technology adoption

description: The shift to the 4th Industrial Revolution (4IR) is said to have potential to increase productivity and improve the quality of life. In the context of the Out-of-Home (OOH) advertising industry, the 4IR era is characterised by using emerging technologies to provide targeted advertising. Without the shift, the industry runs the risk of losing out on revenue growth prospects that are brought about by the adoption of emerging technologies such as Internet of Things (IoT), big data, machine learning and advanced real imaging technology. The aim of the study was to investigate and highlight the main actors, state of play and constraints of the South African OOH industry in relation to the shift towards the 4IR era. Coupled with the use of a technology adoption model, a customised framework was developed on how a South African OOH advertising organisation could go about transitioning towards the 4IR. The successful outcome of the research project would increase the body of knowledge of 4IR transformation strategies in an industry in which limited research has been done. The theory covered applies not only to the OOH advertising industry but could be beneficial to other industries through its contribution to the technology adoption theory.
Additional file 7 of Circular RNA detection identifies circPSEN1 alterations in brain specific to autosomal dominant Alzheimer's disease
Creators: name: Chen, Hsiang-Han
name: Eteleeb, Abdallah
name: Wang, Ciyang
name: Fernandez, Maria Victoria
name: Budde, John P.
name: Bergmann, Kristy
name: Norton, Joanne
name: Wang, Fengxian
name: Ebl, Curtis
name: Morris, John C.
name: Perrin, Richard J.
name: Bateman, Randall J.
name: McDade, Eric
name: Xiong, Chengjie
name: Goate, Alison
name: Farlow, Martin
name: Chhatwal, Jasmeer
name: Schofield, Peter R.
name: Chui, Helena
name: Harari, Oscar
name: Cruchaga, Carlos
name: Ibanez, Laura
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 7. Supplementary Fig. S6.
title: STUDIES ON KINETOPLASTID MITOCHONDRIAL FUCOSYLTRANSFERASES
titleType: Other
Creators: name: Parades Franco, Jose Carlos
Publisher: name: University of Dundee
Year: 2023

description: Protozoan parasites from the Trypanosomatidae family cause terrible diseases that affect human and animal health worldwide. The causative agents of leishmaniases (Leishmania spp.), Chagas disease (Trypanosoma cruzi) and African trypanosomiases (Trypanosoma brucei subsp.) rely heavily on glycoconjugates for their survival and infectivity. Thus, the study of the glycobiology of these parasites represents an opportunity for the identification of novel and much needed therapeutic targets.

Glycosylation processes in eukaryotic cells are carried out by glycosyltransferases located mostly in the secretory pathway, and some in the cytoplasm. Consequently, most of the synthesized glycans, attached to proteins and lipids, are present on their cell surfaces, or in their endosome/lysosome systems, or are secreted.

The discovery of mitochondrial glycosyltransferases in trypanosomatids has challenged this established consensus. Previous work in our group and by collaborators showed that the protein product of an essential fucosyltransferase gene (FUT1) is located inside the mitochondrion of the parasites Leishmania major and Trypanosoma brucei. Although in vitro fucosyltransferase activity has been demonstrated for recombinant LmjFUT1 and TbFUT1, to date, the endogenous substrate(s) of these fucosyltransferases have not been identified. Furthermore, prior to this thesis, nothing was known about the orthologous fucosyltransferase (TcFUT1) in Trypanosoma cruzi.

In this study, I detail approaches to obtain an active form of TcFUT1, both by heterologous (bacteria and human cell) expression and homologous overexpression, in order to characterize its activity and substrate specificity using a panel of synthetic glycan acceptors. This defined TcFUT1 as a GDP-Fuc : βGal α1-2 fucosyltransferase. In parallel, I exploited the metabolism of the non-pathogenic trypanosomatid Crithidia fasciculata to synthesize a critical component for glycosylation activity assays (GDP-[3H]Fuc). Furthermore, initial steps were taken to characterize a high-molecular weight endogenous fucosylated substrate by biosynthetic labelling of C. fasciculata with [3H]-labelled fucose. To assist this approach, we have also generated a genetically modified C. fasciculata cell line that should be deficient in the synthesis of lipoarabinogalactan (LAG). Additionally, based on immunolocalization assays and comparison with similar reports on in T. cruzi, we propose the mitochondrial localization of TcFUT1, at least in the epimastigote form.
Chased Losses
Creators: name: Edwards, Sean
Publisher: name: Cardiff Metropolitan University
Year: 2023
Subjects: Visual cultures

description: Forgetting and remembering, inheritance, dependency, and moving away are all experiences unpinned with care and duty throughout Sean Edwards’ practice. Using intricate and labourintensive forms of sculpture, collage and (most recently for this exhibition) digital modelling, his detailed work focuses on small moments of the ever day, and expresses value in repetition and routine. Edwards draws on recollections of his family and childhood growing up on a large public housing estate in Wales in the 1980s. His multi-disciplinary practice compiles autobiographical fragments alongside shared social narratives. He poetically conveys the atmosphere, texture and sensibility of neglected people and places, with a subtle political imagination that suggests paths out of an endless cycle of suppressed opportunity. In this exhibition, Edwards specifically references such a moment from his youth. These works consider inherited absences and subtleties of character passed down through generations, whether through genetic or psychological disposition. Edwards returns to a profound visual memory of his grandfather throwing away his father’s darts trophies in a black bin bag, recalling the unease and upset caused by this abrupt removal of such personal objects symbolic of skill and achievement. The trophies (comprising shields and plinths with figurines) are represented in a grainy square snapshot from the 1980s, rephotographed on the artist’s studio wall, a sparse white workspace, removed from the warmth of the family home (Dream of Him (2010).
Additional file 6 of Circular RNA detection identifies circPSEN1 alterations in brain specific to autosomal dominant Alzheimer's disease
Creators: name: Chen, Hsiang-Han
name: Eteleeb, Abdallah
name: Wang, Ciyang
name: Fernandez, Maria Victoria
name: Budde, John P.
name: Bergmann, Kristy
name: Norton, Joanne
name: Wang, Fengxian
name: Ebl, Curtis
name: Morris, John C.
name: Perrin, Richard J.
name: Bateman, Randall J.
name: McDade, Eric
name: Xiong, Chengjie
name: Goate, Alison
name: Farlow, Martin
name: Chhatwal, Jasmeer
name: Schofield, Peter R.
name: Chui, Helena
name: Harari, Oscar
name: Cruchaga, Carlos
name: Ibanez, Laura
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 6. Supplementary Fig. S5.
Experience with posting preprints during the Covid-19 pandemic – survey results
Creators: name: Biesenbender, Kristin
name: Peters, Isabella
name: Toepfer, Ralf
Publisher: name: Zenodo
Year: 2023
Subjects: Preprints
Publishing Behavior
COVID-19 Pandemic
Life Sciences
Author Survey

description: Paper presented eat the 19th International Conference of the International Society for Scientometrics and Informetrics (ISSI), 2-5 July 2023, Bloomington, IN, USA
description: This work was funded by BMBF project OASE, grant number 16PU17005A and 16PU17005B. More information on OASE can be found at http://www.zbw.eu/de/forschung/web-science/oase/.
Mapped character trees for chars 1, 21 and 22 from A new dolphin with tusk-like teeth from the late Oligocene of New Zealand indicates evolution of novel feeding strategies
Creators: name: Coste, Ambre
name: Fordyce, R. Ewan
name: Loch, Carolina
Publisher: name: The Royal Society
Year: 2023
Subjects: subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 40308 Palaeontology (incl. Palynology)
subject: FOS: Earth and related environmental sciences
subject: 60301 Animal Systematics and Taxonomy
subject: 60310 Plant Systematics and Taxonomy

description: Pruned phylogenetic trees for tusk-like tooth related characters 1, 21 and 22 of the analysis
SEAMLESS Public release and full documentation of the SEAMLESS prototype. D2.4
Creators: name: Bruggeman, Jorn
name: Bolding, Karsten
name: Nerger, Lars
name: Teruzzi, Anna
name: Spada, Simone
name: Wakamatsu, Tsuyoshi
name: Çağlar Yumruktepe, Veli
name: Skákala, Jozef
name: Ciavatta, Stefano
Publisher: name: Zenodo
Year: 2024

description: This document presents the SEAMLESS prototype: the Ensemble and Assimilation Tool (EAT), which is a flexible and extensible software package that enables data assimilation of physical and biogeochemical variables in a one-dimensional water column.

EAT builds on established open-source components for ocean physics (GOTM), biogeochemistry (FABM) and data assimilation (PDAF). It is easy to install and operate, and flexible through support for user-written plugins. With full support for strongly and weakly coupled physical-biogeochemical data assimilation, the ability to assimilate observations of any diagnostic calculated within biogeochemical models, and the ability to estimate biogeochemical parameters, EAT is well suited to explore and advance the state-of-the-art in marine data assimilation (DA). Its range of capabilities is demonstrated with four applications that demonstrate core functionality and EAT’s ability to mimic the configuration of operational data assimilation systems.
A Saint-Venant shallow water model for overland flows with precipitation and recharge
Creators: name: Ersoy, Mehmet
name: Lakkis, Omar
name: Townsend, Philip
Publisher: name: arXiv
Year: 2017
Subjects: subject: Numerical Analysis (math.NA)
subject: FOS: Mathematics
subject: 76N99, 65M08

description: We propose a one-dimensional Saint-Venant (open channel) model overland flows including a water input--output source term modelling recharge via rainfall and infiltration (or exfiltration). We derive the model via asymptotic reduction from the two-dimensional Navier--Stokes equations under the shallow water assumption, with boundary conditions including recharge via ground infiltration and runoff. This new model recovers existing models as sepcial cases, and adds more scope by adding a water-mixing friction terms that depends on the rate of water recharge. We prospose a novel entropy function and its flux, that are useful in validating the model's conservation or dissipation properties. Based on this entropy function we propose a finite volume scheme extending a class of kinetic schemes and provide numerical comparisons with respect to the newly introduced mixing friction coefficient. We also provide a comparison with experimental data.
description: 6 figures, free simulation software available on request
title: Values in the International Community
title: Jus cogens in light of the International Law Commission’s 2022 Conclusions
titleType: Subtitle
Creators: name: Wood, Michael
Publisher: name: Freie Universität Berlin
Year: 2023
Subjects: subject: UN International Law Commission’s 2022
subject: 300 Sozialwissenschaften::340 Recht::340 Recht

description: The author discusses the UN International Law Commission’s 2022 draft conclusions on jus cogens, and suggests that it is in the interest of all States that the General Assembly take note of them in 2023. The debate in the Sixth Committee of the General Assembly in 2022 showed that some States remain highly critical of particular points in the draft conclusions. The conclusions do remain problematic in at least one important respect, the possible effect of jus cogens norms on binding Security Council decisions. Overall, however, they offer carefully judged clarifications on what is an important topic for the present and future of international law. The systematic and rigorous approach proposed by the ILC’s draft conclusions for the identification of jus cogens norms, and the limited consequences of such norms set out in the conclusions, should enhance stability and the international rule of law. It may be concluded that recent developments in relation to jus cogens represent an advance for the rule of law as compared with 1969 when the term was included in the Vienna Convention on the Law of Treaties. This will be particularly so if the General Assembly now proceeds to adopt a resolution annexing the 2022 conclusions. Doing so would help to consolidate a sound understanding of jus cogens, and would be without prejudice to the positions of States on particular points of concern.
Make the best of your data
Creators: name: Svoboda, Nikolai
name: Schmidt, Marcus
name: Meier, Kristin
name: Markus, Katharina
name: Parmaksiz, Uta
Publisher: name: Zenodo
Year: 2021
Subjects: research data management
agricultural data
repositorium
bonares
DOI
publishing
workflow

description: As more data & larger amounts of data is produced in any field of science, there is a growing need for its efficient management and proper tools that support scientists in their daily work. Addressing this need, our international workshop on the data life cycle, data publication and long-term data preservation brought together the agricultural (ZALF), soil science (BonaRes) and long-term data preservation community (ZB MED). 23 participants, including scientists from Hungary, Morocco and China, went through practical exercises on the data life cycle and the process of FAIR data publication (that is: Findable, Accessible, Interoperable and Reusable). As the BonaRes Data Repository is currently cooperating with the ZB MED (the Information Centre for Life Sciences) to make data reusable for centuries (yes, centuries), they gave very interesting insights in how to make sure that software and formats will still be readable many years and software versions from now. Together with the experience from our workshop on machine learning a week before we figured out that there is much interest in progressive digital solutions to agricultural data challenges. In further workshops, we will address some expressed needs of our community and adapt them accordingly: e.g., train the trainer and opportunities for publication in specialized data journals.
Contagious Ecthyma: - Economic losses in Sheep and Goats
Creators: name: Anil*1, Rajesh Kumar Bochlya2
Publisher: name: The Science world a Monthly e magazine
Year: 2024

description: Introduction

Contagious ecthyma is a contagious viral infection that causes economic losses in sheep and goat-rearing countries. This condition is distinguished by its unique cutaneous lesions, which appear primarily in the mouth but less frequently in other areas such as the belly and groin region. Most cases of the condition are mild. However, the virus's capacity to induce recurring infection in the same animal, severe morbidity in adults, death in young lambs and kids, zoonotic origin, and potential to cross-infect other species besides sheep and goats make it a worldwide illness. The disease is prevalent throughout India and causes significant economic losses. The lesions are distinctive, and the diagnosis is verified by a PCR assay.
Additional file 1 of Genetic and cytometric analyses of subcutaneous adipose tissue in patients with hemophilia and HIV-associated lipodystrophy
Creators: name: Mashiko, Takanobu
name: Tsukada, Kunihisa
name: Takada, Hitomi
name: Wu, Szu-Hsien
name: Kanayama, Koji
name: Asahi, Rintaro
name: Mori, Masanori
name: Kurisaki, Akira
name: Oka, Shinichi
name: Yoshimura, Kotaro
Publisher: name: figshare
Year: 2022
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Additional file 1: Table S1. The history of antiretroviral therapy of the patients with HIV-associated lipodystrophy.
On an elastic model arising from volcanology: an analysis of the direct and inverse problem
Creators: name: Aspri, Andrea
name: Beretta, Elena
name: Rosset, Edi
Publisher: name: arXiv
Year: 2017
Subjects: subject: Analysis of PDEs (math.AP)
subject: FOS: Mathematics
subject: 35R30 (35J57, 74B05, 86A60)

description: In this paper we investigate a mathematical model arising from volcanology describing surface deformation effects generated by a magma chamber embedded into Earth's interior and exerting on it a uniform hydrostatic pressure. The modeling assumptions translate mathematically into a Neumann boundary value problem for the classical Lamé system in a half-space with an embedded pressurized cavity. We establish well-posedness of the problem in suitable weighted Sobolev spaces and analyse the inverse problem of determining the pressurized cavity from partial measurements of the displacement field proving uniqueness and stability estimates.
The homotopy limit problem and the cellular Picard group of Hermitian $K$-theory
Creators: name: Heard, Drew
Publisher: name: arXiv
Year: 2017
Subjects: subject: Algebraic Topology (math.AT)
subject: K-Theory and Homology (math.KT)
subject: FOS: Mathematics

description: We use descent theoretic methods to solve the homotopy limit problem for Hermitian $K$-theory over quasi-compact and quasi-separated base schemes. As another application of these descent theoretic methods, we compute the cellular Picard group of 2-complete Hermitian $K$-theory over $\mathop{Spec}(\mathbb{C})$, showing that the only invertible cellular spectra are suspensions of the tensor unit.
description: v4: results made unconditional, assumptions on base scheme weakened. Version to appear in Annals of K-theory
Additional file 1 of Comparison of total immunoglobulin G antibody responses to different protein fragments of Plasmodium vivax Reticulocyte binding protein 2b
Creators: name: Bourke, Caitlin
name: Takashima, Eizo
name: Chan, Li-Jin
name: Dietrich, Melanie H.
name: Mazhari, Ramin
name: White, Michael
name: Sattabongkot, Jetsumon
name: Tham, Wai-Hong
name: Tsuboi, Takafumi
name: Mueller, Ivo
name: Longley, Rhea
Publisher: name: figshare
Year: 2022
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 1: Figure S1. SDS-PAGE (10%) visualisation of purified recombinant proteins used for magnetic bead coupling. Figure S2. Standard curve serial dilutions for plates used in this study of protein-magnetic bead couplings with the hyper-immune positive control pool of individuals from Papua New Guinea.
Langevin diffusions on the torus: estimation and applications
Creators: name: García-Portugués, Eduardo
name: Sørensen, Michael
name: Mardia, Kanti V.
name: Hamelryck, Thomas
Publisher: name: arXiv
Year: 2017
Subjects: subject: Methodology (stat.ME)
subject: FOS: Computer and information sciences
subject: 60J60, 62H11, 62M05

description: We introduce stochastic models for continuous-time evolution of angles and develop their estimation. We focus on studying Langevin diffusions with stationary distributions equal to well-known distributions from directional statistics, since such diffusions can be regarded as toroidal analogues of the Ornstein-Uhlenbeck process. Their likelihood function is a product of transition densities with no analytical expression, but that can be calculated by solving the Fokker-Planck equation numerically through adequate schemes. We propose three approximate likelihoods that are computationally tractable: (i) a likelihood based on the stationary distribution; (ii) toroidal adaptations of the Euler and Shoji-Ozaki pseudo-likelihoods; (iii) a likelihood based on a specific approximation to the transition density of the wrapped normal process. A simulation study compares, in dimensions one and two, the approximate transition densities to the exact ones, and investigates the empirical performance of the approximate likelihoods. Finally, two diffusions are used to model the evolution of the backbone angles of the protein G (PDB identifier 1GB1) during a molecular dynamics simulation. The software package sdetorus implements the estimation methods and applications presented in the paper.
description: 29 pages, 8 figures, 5 tables
title: Windlass Taping Technique for Symptomatic Relief of Plantar Fasciitis
Creators: name: Ernst, Beth Anne
Publisher: name: Old Dominion University Libraries
Year: 1997

description: This study investigated the biomechanical and symptomatic effects of a newly described taping technique to support the longitudinal arch in symptomatic plantar fasciitis patients. The subjects were 20 individuals all diagnosed by a physician with unilateral plantar fasciitis, ambulating full weight-bearing without an assistive device.

Measurements were taken pre and post-taping for calcaneal position, tibial position and navicular height, with the subjects serving as their own control. The subjects also reported pain level pre and post tape using a visual analog scale. The statistical analysis performed on the biomechanical data was the t-test, and Wilcoxon matched-pairs signed ranks test was performed on the visual analog scale data.

It was concluded that the Windlass Taping Technique" provided symptomatic relief at a statistically significant level. The taping technique also provided measurable, biomechanical changes in pronation.
1 foot 2 feet
Creators: name: Vuvan, Dominique T.
name: Xu, Chenhui
Publisher: name: OSF Registries
Year: 2023
Subjects: subject: Arts and Humanities
subject: Music
subject: Cognition and Perception
subject: Social and Behavioral Sciences
subject: Psychology
subject: FOS: Psychology
subject: Music Performance

description: Investigating the effect of stance on sensorimotor synchronization
title: Investigating the roles of age, sex, depression, and anxiety for valence and arousal ratings of words: a population‑based study
Creators: name: Teismann, Henning
name: Kissler, Johanna
name: Berger, Klaus
Publisher: name: University of Muenster, Institutional Repository MIAMI
Year: 2023
Subjects: subject: 610 Medicine and health

description: Background: The perception of the affective quality of stimuli with regard to valence and arousal has mostly been studied in laboratory experiments. Population-based research may complement such studies by accessing larger, older, better balanced, and more heterogeneous samples. Several characteristics, among them age, sex, depression, or anxiety, were found to be associated with affective quality perception. Here, we intended to transfer valence and arousal rating methods from experimental to population-based research. Our aim was to assess the feasibility of obtaining and determining the structure of valence and arousal ratings in the setting of the large observational BiDirect Study. Moreover, we explored the roles of age, sex, depression, and anxiety for valence and arousal ratings of words. Methods: 704 participants provided valence and arousal ratings for 12 written nouns pre-categorized as unpleasant, neutral, or pleasant. Predictors of valence and arousal ratings (i.e. age, sex, depression, and anxiety) were analyzed for six outcomes that emerge by combining two affective dimensions with three words categories. Data were modeled with multiple linear regression. Relative predictor importance was quantified by model-explained variance decomposition. Results: Overall, average population-based ratings replicated those found in laboratory settings. The model did not reach statistical significance in the valence dimension. In the arousal dimension, the model explained 5.4% (unpleasant), 4.6% (neutral), and 3.5% (pleasant) of the variance. (Trend) effects of sex on arousal ratings were found in all word categories (unpleasant: increased arousal in women; neutral, pleasant: decreased arousal in women). Effects of age and anxiety (increased arousal) were restricted to the neutral words. Conclusions: We report results of valence and arousal ratings of words in the setting of a large, observational, population-based study. Method transfer yielded acceptable data quality. The analyses demonstrated small effects of the selected predictors in the arousal dimension.
description: Finanziert über die DEAL-Vereinbarung mit Wiley 2019-2022.
title: Διαχείριση κινδύνου κατά τη μεταφορά και αποθήκευση στις διεθνείς μεταφορές
title: Risk management of freight transportation and warehousing in international shipping
titleType: AlternativeTitle
Creators: name: Κουτσοκώστας, Ιωάννης
Publisher: name: Πανεπιστήμιο Πειραιώς
Year: 2021
Subjects: subject: Διαχείριση κινδύνου
subject: Διεθνείς μεταφορές
subject: Ασφάλιση φορτίου
subject: Κίνδυνοι μεταφοράς
subject: Μέσα μεταφορών
subject: Καταστροφή φορτίου
subject: Risk management

description: Η παρούσα διπλωματική εργασία περιγράφει, αναλύει και ταξινομεί τους κινδύνους που αντιμετωπίζει μία διεθνής μεταφορά και αποθήκευση καθώς και τρόπους μετριασμού και διαχείρισης των κινδύνων αυτών. Επίσης παρουσιάζει τα απαραίτητα μέσα μεταφοράς καθώς και τις υποδομές που απαιτούνται ώστε να μπορεί να πραγματοποιηθεί μια μεταφορά σε διεθνές επίπεδο.
Momentary within-subject associations of affective states and physical behavior are moderated by weather conditions in real life: an ambulatory assessment study
Creators: name: Timm, Irina
name: Reichert, Markus
name: Ebner-Priemer, Ulrich W.
name: Giurgiu, Marco
Publisher: name: Springer Fachmedien Wiesbaden
Year: 2023
Subjects: Physical activity
Sedentary behavior
Mood
Context
Temperature
Precipitation
Ecological momentary assessment

description: Background. Physical behavior (PB) is a key lifestyle factor in regulating and preventing diseases across the lifespan. Researchers identified affective, cognitive, and contextual factors like weather conditions, as significant contributors in determining if individuals are physically active. However, there is scarce empirical evidence about potential associa‐ tions between PB and affective states influenced by weather conditions in daily life. Therefore, we explored if weather conditions moderated the within‐subject association between momentary affective states and subsequent PB.
Methods. Utilizing ambulatory assessment, 79 participants completed electronic diaries about their affective states (i.e., valence, energetic arousal, and calmness) up to six times a day over five days, and their PB (i.e., physical activity and sedentariness) was simultaneously recorded via accelerometers. Weather conditions (i.e., temperature and pre‐ cipitation) recorded near participants’ locations served as moderators in the multilevel analyses.
Results. We confirmed earlier findings associating affective states with PB. Increased valence and energetic arousal were positively associated with physical activity (β = 0.007; p < .001), whereas calmness predicted lower levels of physi‐ cal activity (β = ‐0.006; p < .001). Higher levels of calmness showed a positive association with sedentary behavior (β = 0.054; p = .003). In addition, we revealed a significant positive association between temperature, as a momentary weather condition, and physical activity (β = 0.025; p = .015). Furthermore, we showed that the association of affec‐ tive states and physical activity was moderated by temperature. Higher temperatures enhanced the positive effects of valence on physical activity (β = .001, p = .023) and attenuated the negative effects of calmness on physical activity (β = .001, p = .021). Moreover, higher temperatures enhanced the positive effects of valence on reduced sedentary behavior (β = ‐0.011, p = .043).
Conclusions. Temperature alterations appeared to have an impact on subsequent physical activity. Furthermore, temperature alterations moderated the influence of affective states on conducted physical activity. This might offer the opportunity for just‐in‐time adaptive interventions to intervene in individually appropriate environmental conditions for promoting physical activity.