cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Study protocol Version 1.1 - June 22nd, 2021: Exposure risk, burden of disease, and access to care: comparison of tuberculosis and COVID-19 in Lima, Peru
Creators: name: Otero, Larissa
name: Cisneros, Jesus
name: Nieto-Sanchez, Claudia
name: Zafra Tanaka, Jessica
name: Grietens, Koen Peeters
name: Verdonck, Kristien
Publisher: name: figshare
Year: 2021
Subjects: classificationCode: 420699
subject: Public health not elsewhere classified

description: The file contains the protocol for a study entitled “Exposure
risk, burden of disease, and access to care: comparison of tuberculosis and
COVID-19 in Lima, Peru”. This protocol was approved by the Institutional Review
Board of the Institute of Tropical Medicine, Antwerp, Belgium on 23 June 2021. A Spanish version of the study protocol, approved by the Ethics Committee of the Universidad Peruana Cayetano Heredia is also available via Figshare.

Introduction: Peru is one of the countries with the highest
burden of tuberculosis (TB) in the Latin American region. In addition, it is
among the countries most affected by the SARS-CoV-2/COVID-19 epidemic. Since TB
and COVID-19 share transmission mechanisms and risk factors at individual and
at population level, overlaps can be expected in the burden of disease caused
by these two conditions.

Objectives: To determine and explain overlapping
heterogeneities in the risk and burden of TB and COVID-19 in Lima. The specific
objectives of the study are the following: 1) Determine the geographical
distribution and burden of TB and COVID-19 disease in the 50 districts of the
Lima and Callao provinces (using quantitative analysis of secondary data), 2)
Evaluate the risk of exposure to TB and COVID-19 (using quantitative and
qualitative methods), 3) Describe the changes in the delivery of TB-related health
services and in the health-seeking itineraries of TB patients during the
pandemic (using qualitative methods), and 4) Identify patterns of vulnerability
and resilience (based on joint analysis of mixed-methods interdisciplinary
data).

Methods: Methods: A convergent parallel-design mixed-methods
study ([QUAL] + [QUAN]) will be developed in which both strands constantly
inform each other. The quantitative research strand will begin by evaluating
the overlaps in the burden of TB and COVID-19 and their association with
factors from publicly available district-level data (secondary data). A
parallel qualitative strand will begin by generating detailed ethnographic data
to enrich the exposure risk assessment (primary data).
Patella fissura Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Pezizales
Patellidae
Patella
Patella fissura

description: Patella fissura [spec. nov.]
P. testa ovali striato reticulata, vertice recurvo, antice fissa.
List. conch. t. 543. f. 28.
Klein. ostr. 116. Patella reticulata exigua alba, fissura notabili in margine.
Habitat ad Angliam rarius. Lister; ad Algiriam frequentior. E. Brander.
Testae fissura linearis, a margine antico ad lateris medium incisa.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 784, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
Quantum mechanics, objective reality, and the problem of consciousness
Creators: name: Mukhopadhyay, Ranjan
Publisher: name: arXiv
Year: 2018
Subjects: subject: History and Philosophy of Physics (physics.hist-ph)
subject: FOS: Physical sciences

description: The hard problem in consciousness is the problem of understanding how physical processes in the brain could give rise to subjective conscious experience. In this paper, I suggest that in order to understand the relationship between consciousness and the physical world, we need to probe deeply into the nature of physical reality. This leads us to quantum physics and to a second explanatory gap: that between quantum and classical reality. I will seek a philosophical framework that can address these two gaps simultaneously. Our analysis of quantum mechanics will naturally lead us to the notion of a hidden reality and to the postulate that consciousness is an integral component of this reality. The framework proposed in the paper provides the philosophical underpinnings for a theory of consciousness while satisfactorily resolving the interpretation problem in quantum mechanics without the need to alter its mathematical structure. I also discuss some implications for a scientific theory of consciousness.
Additional file 2 of MYCN protein stability is a better prognostic indicator in neuroblastoma
Creators: name: Yang, Yi
name: Zhao, Jie
name: Zhang, Yingwen
name: Feng, Tianyue
name: Yv, Bo
name: Wang, Jing
name: Gao, Yijin
name: Yin, Minzhi
name: Tang, Jingyan
name: Li, Yanxin
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer

description: Additional file 2: Supplemental Fig. 2. a Heat map grouped by MYCN FISH and IHC results. The mRNA expression of MYCN and genes related to MYCN protein stability were shown.
Vanilla latisegmenta Ames & C. Schweinf.
Creators: name: Damián-Parizaca, Alexander
name: Karremans, Adam P.
name: Mitidieri-Rivera-Rivera, Nicole
name: Cameron, Kenneth M.
Publisher: name: Zenodo
Year: 2025
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Liliopsida
Asparagales
Orchidaceae
Vanilla
Vanilla latisegmenta

description: 13.Vanilla latisegmentaAmes & C. Schweinf. (Ames and Schweinfurth 1925: 2)
Fig. 2 D
Type.
GUYANA (British Guiana) • Upper Rupununi River, near Dadanawa; 29 May 1922; J. S. de la Cruz 1404; holotype: AMES! [AMES 22973]; isotypes: AMES! [AMES 7850], GH! [GH 7850], MO! [MO 2602185], US! [US 00093324].
Notes.
Ames and Schweinfurth (1925) explicitly designated J. S. de la Cruz 1404 as the holotype of V. latisegmenta and specified AMES as the herbarium where the holotype is deposited. Soto-Arenas and Cribb (2010) listed a collection at GH as isotype. We further list additional isotypes found at MO and US.
description: Published as part of Damián-Parizaca, Alexander, Karremans, Adam P., Mitidieri-Rivera-Rivera, Nicole & Cameron, Kenneth M., 2025, Towards a monograph of membranaceous Vanillas: a nomenclatural revision of Vanilla subgen. Vanilla (Vanilloideae, Orchidaceae), pp. 111-121 in Plant Ecology and Evolution 158 (1) on pages 111-121, DOI: 10.5091/plecevo.140667
Patella pustula Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Pezizales
Patellidae
Patella
Patella pustula

description: Patella pustula [spec. nov.]
P. testa ovali gibboso-convexa striato-reticulata, margine crenulato, vertice perforato.
Klein. ostr. t. 8. f. 3.
Habitat in M. Mediterraneo. Brander.
Testa simillima praecedenti, apertura margini posico{?X} propior.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 784, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
Dispersive Methods and QCD Sum Rules for γγCollisions
Creators: name: Coriano', Claudio
Publisher: name: arXiv
Year: 1994
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: It has been shown, in the case of meson photoproduction, that the power-law falloff of these reactions can be described by lowest order (real) sum rules, at moderate momentum transfer. The phases of these processes, in this regime, are usually thought to be non-perturbative. In a sum rule framework, however, they can possibly be described by radiative corrections to the hadronic spectral densities of the corresponding helicities, which become complex functions to order $α_s$, and the effects of interference can be strongly enhanced by the presence of the vacuum condensates in the dispersion relation. It is shown that the imaginary parts of these complex corrections have a factorized form and can be evaluated in a systematic fashion, while their real parts, at the same perturbative order, are down by at least 2 powers of momentum transfer. The analysis is done at two loop level, combining dimensional regularization and light-cone methods. The calculations are performed for all the independent set of scalar diagrams generated by the OPE. The analytical bounds are identified and discussed.
description: 38 pages in plane latex 8 figs. available upon request as hardcopy and as a poscript file, (ANL-HEP-PR-94-18)
Magnetic second-order topological insulators and semimetals
Creators: name: Ezawa, Motohiko
Publisher: name: arXiv
Year: 2018
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We propose magnetic second-order topological insulators (SOTIs). First, we study a three-dimensional model. It is pointed out that the previously proposed topological hinge insulator has actually surface states along the [001] direction in addition to hinge states. We gap out these surface states by introducing magnetization, obtaining a SOTI only with hinge states. The bulk topological number is the $Z_2$ index protected by the combined symmetry of the four-fold rotation and the inversion symmetry. We next study two dimensional magnetic SOTIs, where the corner states are robust also in the presence of the magnetization. Finally, we construct a magnetic second-order topological semimetals by layering the two-dimensional magnetic SOTIs, where hinge-arc states are robust also in the presence of the magnetization.
description: 4 pages, 7 figures
Theory of the inverse spin galvanic effect in quantum wells
Creators: name: Sheikhabadi, Amin Maleki
name: Miatka, Iryna
name: Sherman, E. Ya.
name: Raimondi, Roberto
Publisher: name: arXiv
Year: 2018
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: The understanding of the fundamentals of spin and charge densities and currents interconversion by spin-orbit coupling can enable efficient applications beyond the possibilities offered by conventional electronics. For this purpose we consider various forms of the frequency-dependent inverse spin galvanic effect (ISGE) in semiconductor quantum wells and epilayers taking into account the cubic in the electron momentum spin-orbit coupling in the Rashba and Dresselhaus forms, concentrating on the current-induced spin polarization (CISP). We find that including the cubic terms qualitatively explains recent findings of the CISP in InGaAs epilayers being the strongest if the internal spin-orbit coupling field is the smallest and vice versa (Norman et . 2014, Luengo et al. 2017), in contrast to the common understanding. Our results provide a promising framework for the control of spin transport in future spintronics devices.
description: 13 pages, 12 figures
Additional file 3 of MYCN protein stability is a better prognostic indicator in neuroblastoma
Creators: name: Yang, Yi
name: Zhao, Jie
name: Zhang, Yingwen
name: Feng, Tianyue
name: Yv, Bo
name: Wang, Jing
name: Gao, Yijin
name: Yin, Minzhi
name: Tang, Jingyan
name: Li, Yanxin
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer

description: Additional file 3.
Supplementary plots for R0, reductions in amplification severity, and reductions in amplification range of occurrence from Dynamic modelling of personal protection control strategies for vector-borne disease limits the role of diversity amplification
Creators: name: Demers, Jeffery
name: Bewick, Sharon
name: Calabrese, Justin
name: Fagan, William F.
Publisher: name: The Royal Society
Year: 2018
Subjects: subject: 10202 Biological Mathematics
subject: FOS: Mathematics

description: These plots are analogous to the plots in the main document but with varied human recovery times.
The Cosmological Dependence of Galactic Specific Angular Momenta
Creators: name: Eke, Vincent
name: Efstathiou, George
name: Wright, Lisa
Publisher: name: arXiv
Year: 1999
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Hydrodynamical simulations of galaxy formation in spatially flat Cold Dark Matter (CDM) cosmologies with and without a cosmological constant (Lambda) are described. A simple star formation algorithm is employed and radiative cooling is allowed only after redshift z=1 so that enough hot gas is available to form large, rapidly rotating stellar discs if angular momentum is approximately conserved during collapse. The specific angular momenta of the final galaxies are found to be sensitive to the assumed background cosmology. This dependence arises from the different angular momenta contained in the haloes at the epoch when the gas begins to collapse and the inhomogeneity of the subsequent halo evolution. In the Lambda-dominated cosmology, the ratio of stellar specific angular momentum to that of the dark matter halo (measured at the virial radius) has a median value of ~0.24 at z=0. The corresponding quantity for the Lambda=0 cosmology is over 3 times lower. It is concluded that the observed frequency and angular momenta of disc galaxies pose significant problems for spatially flat CDM models with Lambda=0 but may be consistent with a Lambda-dominated CDM universe.
description: 5 pages, 5 figures, submitted to MNRAS
Horizon 2020 Research and Innovation Action kick-off: SIMCor (In-Silico testing and validation of Cardiovascular IMplantable devices)
Creators: name: Rizzo, Anna
Publisher: name: Zenodo
Year: 2021

description: Press release n.1/2021 of the SIMCor project, announcing project inception and conclusion of our kick-off meeting.
description: This project has received funding from the European Union's Horizon 2020 research and innovation programme under grant agreement No 101017578
Early-type galaxies in the Antlia Cluster: Catalogue and isophotal analysis
Creators: name: Calderón, Juan P.
name: Bassino, Lilia P.
name: Cellone, Sergio A.
name: Gómez, Matías
Publisher: name: arXiv
Year: 2018
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We present a statistical isophotal analysis of 138 early-type galaxies in the Antlia cluster, located at a distance of ${\sim} 35$ Mpc. The observational material consists of CCD images of four $36$ arcmin ${\times} 36$ arcmin fields obtained with the MOSAIC II camera at the Blanco 4-m telescope at CTIO. Our present work supersedes previous Antlia studies in the sense that the covered area is four times larger, the limiting magnitude is $M_{B} {\sim} -9.6$ mag, and the surface photometry parameters of each galaxy are derived from Sérsic model fits extrapolated to infinity. In a companion previous study we focused on the scaling relations obtained by means of surface photometry, and now we present the data, on which the previous paper is based, the parameters of the isophotal fits as well as an isophotal analysis. For each galaxy, we derive isophotal shape parameters along the semi-major axis and search for correlations within different radial bins. Through extensive statistical tests, we also analyse the behaviour of these values against photometric and global parameters of the galaxies themselves. While some galaxies do display radial gradients in their ellipticity ($ε$) and/or their Fourier coefficients, differences in mean values between adjacent regions are not statistically significant. Regarding Fourier coefficients, dwarf galaxies usually display gradients between all adjacent regions, while non-dwarfs tend to show this behaviour just between the two outermost regions. Globally, there is no obvious correlation between Fourier coefficients and luminosity for the whole magnitude range ($-12 {\gtrsim} M_{V} {\gtrsim} -22$); however, dwarfs display much higher dispersions at all radii.
description: Accepted for publication in MNRAS
Whole genome sequence of Stenotrophomonas rhizophila strain B68 recovered from the surface of a dairy pasteurizer
Creators: name: Instituut voor Landbouw en Visserijonderzoek
Publisher: name: Zenodo
Year: 2024

description: Whole genome sequence of Stenotrophomonas rhizophila strain B68 recovered from the surface of a dairy pasteurizer following cleaning and disinfection in the FASTA format. The bacteria was grown overnight in BHI broth and its DNA was extracted using the Qiagen tissue culture DNA extraction kit (DNeasy Blood & Tissue Kits). The genomic DNA was randomly sheared into short fragments. The obtained fragments were end repaired, A-tailed and further ligated with Illumina adapter. The library was checked with Qubit and real-time PCR for quantification and bioanalyzer for size distribution detection. Quantified libraries were pooled and sequenced on Illumina platform (NovaSeq 6000) according to effective library concentration and data amount required. The genome assembly process for sequence submission involved several meticulous steps using Clean Data. Initially, SOAPdenovo software was employed, where different K-mers (typically 95, 107, 119) were selected based on the project type. The optimal K-mer was determined, and other parameters were adjusted to choose the preliminary assembly with the fewest scaffolds. Next, SPAdes software was used with default K-mers of 99 and 127 to achieve an assembly with minimal scaffolds. Following this, Abyss software was utilized with a K-mer of 64 for assembly. The outcomes from these three software tools were then integrated using CISA software, selecting the result with the least scaffolds. GapClose software played a crucial role in filling gaps in the preliminary assembly. Additionally, contamination was minimized by removing reads with a sequencing depth lower than 0.35 times the average depth. Fragments shorter than 500 bp were filtered out, and the final assembly was prepared for gene prediction after these rigorous steps. Overall genome coverage was over 99%.
Oscillator Strengths and Damping Constants for Atomic Lines in the J and H Bands
Creators: name: Melendez, Jorge
name: Barbuy, Beatriz
Publisher: name: arXiv
Year: 1999
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We have built a line list in the near-infrared J and H bands (1.00-1.34, 1.49-1.80 um) by gathering a series of laboratory and computed line lists. Oscillator strengths and damping constants were computed or obtained by fitting the solar spectrum. The line list presented in this paper is, to our knowledge, the most complete one now available, and supersedes previous lists.
description: Accepted, Astrophysical Journal Supplement, tentatively scheduled for the Sep. 1999 Vol. 124 #1 issue. Text and tables also available at http://www.iagusp.usp.br/~jorge/
Twist Angle-Dependent Bands and Valley Inversion in 2D Materials/hBN Heterostructures
Creators: name: Che, Shi
name: Stepanov, Petr
name: Ge, Supeng
name: Lee, Yongjin
name: Myhro, Kevin
name: Shi, Yanmeng
name: Chen, Ruoyu
name: Pi, Ziqi
name: Pan, Cheng
name: Cheng, Bin
name: Taniguchi, Takashi
name: Watanabe, Kenji
name: Bockrath, Marc
name: Barlas, Yafis
name: Lake, Roger
name: Lau, Chun Ning
Publisher: name: arXiv
Year: 2018
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: The use of relative twist angle between adjacent atomic layers in a van der Waals heterostructure, has emerged as a new degree of freedom to tune electronic and optoelectronic properties of devices based on 2D materials. Using ABA-stacked trilayer (TLG) graphene as the model system, we show that, contrary to conventional wisdom, the band structures of 2D materials are systematically tunable depending on their relative alignment angle between hexagonal BN (hBN), even at very large twist angles. Moreover, addition or removal of the hBN substrate results in an inversion of the K and K' valley in TLG's lowest Landau level (LL). Our work illustrates the critical role played by substrates in van der Waals heterostructures and opens the door towards band structure modification and valley control via substrate and twist angle engineering.
Patella graeca Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Pezizales
Patellidae
Patella
Patella graeca

description: Patella graeca [spec. nov.]
P. testa ovata convexa: margine introrsum crenulato, vertice perforato.
Bonan. recr. 1. t. 6.
Tournef. iter. 1. t. 94.
Gvalt. test. t. 9. f. N.
Kratzenst. Regenf. 8. t. 2. f. 23.
Habitat in M. Mediterraneo.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on pages 784-785, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
On the computation of fusion over the affine Temperley-Lieb algebra
Creators: name: Belletête, Jonathan
name: Saint-Aubin, Yvan
Publisher: name: arXiv
Year: 2018
Subjects: subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: Fusion product originates in the algebraisation of the operator product expansion in conformal field theory. Read and Saleur (2007) introduced an analogue of fusion for modules over associative algebras, for example those appearing in the description of 2d lattice models. The article extends their definition for modules over the affine Temperley-Lieb algebra $\atl n$. Since the regular Temperley-Lieb algebra $\tl n$ is a subalgebra of the affine $\atl n$, there is a natural pair of adjoint induction-restriction functors $(\Indar{}, \Resar{})$. The existence of an algebra morphism $ϕ:\atl n\to\tl n$ provides a second pair of adjoint functors $(\Indphi{},\Resphi{})$. Two fusion products between $\atl{}$-modules are proposed and studied. They are expressed in terms of these four functors. The action of these functors is computed on the standard, cell and irreducible $\atl n$-modules. As a byproduct, the Peirce decomposition of $\atl n(q+q^{-1})$, when $q$ is not a root of unity, is given as direct sum of the induction $\Indar{\TheS{n,k}}$ of standard $\tl n$-modules to $\atl n$-modules. Examples of fusion products of various pairs of affine modules are given.
description: 32 pages
Additional file 1 of MYCN protein stability is a better prognostic indicator in neuroblastoma
Creators: name: Yang, Yi
name: Zhao, Jie
name: Zhang, Yingwen
name: Feng, Tianyue
name: Yv, Bo
name: Wang, Jing
name: Gao, Yijin
name: Yin, Minzhi
name: Tang, Jingyan
name: Li, Yanxin
Publisher: name: figshare
Year: 2022
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer

description: Additional file 1: Supplemental Fig. 1. a-d Survival curve analysis of EFS (a-b) and OS(c-d) when MYCN amplification (b,d) or not (a,c). Log-rank (Mantel-Cox) test was used to generate the p-value.
Neutrino Decay in the Doublet Majoron Model
Creators: name: Kikuchi, Hisashi
name: Ma, Ernest
Publisher: name: arXiv
Year: 1994
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: A new Majoron model is presented within the framework of the seesaw mechanism. Its Higgs sector consists of only doublet representations and the lepton-number violation takes place at the same scale of the electroweak symmetry breaking. This model is different from the singlet- or triplet-Majoron model in several respects: it is free from the \(ρ\)-parameter constraint and it provides moderately fast neutrino decay, but the constraint from the stellar cooling of red giants is satisfied only with an imposed approximate symmetry. A \(τ\) neutrino as heavy as 10 MeV is possible in this model despite various cosmological and astrophysical constraints.
description: (A discussion on a constraint from nucleosynthesis is revised, related references are added, the figure is corrected accordingly.), 16 pages + 1 figure (figure is available upon request.), LaTeX, UCRHEP-T126
Modulus metrics on networks
Creators: name: Albin, Nathan
name: Fernando, Nethali
name: Poggi-Corradini, Pietro
Publisher: name: arXiv
Year: 2018
Subjects: subject: Metric Geometry (math.MG)
subject: FOS: Mathematics
subject: 90C35

description: The concept of $p$-modulus gives a way to measure the richness of a family of objects on a graph. In this paper, we investigate the families of connecting walks between two fixed nodes and show how to use $p$-modulus to form a parametrized family of graph metrics that generalize several well-known and widely-used metrics. We also investigate a characteristic of metrics called the "antisnowflaking exponent" and present some numerical findings supporting a conjecture about the new metrics. We end with explicit computations of the new metrics on some selected graphs.
description: To appear in Discrete and Continuous Dynamical Systems - B
Patella nimbosa Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Pezizales
Patellidae
Patella
Patella nimbosa

description: Patella nimbosa [spec. nov.]
P. testa ovata striata rugosa fusca, vertice oblongoperforato.
List. conch. 4. s. 1. c. 1. t. 1, 2.
Gvalt. test. t. 9. f. P, Q, R, S, T.
Argenv. conch. t. 6. f. I.
Habitat in M. Europae australis, Americae.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 785, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
Additional file 5 of Identification and characterization of transposable element AhMITE1 in the genomes of cultivated and two wild peanuts
Creators: name: Tang, Yanyan
name: Li, Xiaoting
name: Hu, Changli
name: Qiu, Xiaochen
name: Li, Jingjing
name: Li, Xin
name: Zhu, Hong
name: Wang, Jingshan
name: Sui, Jiongming
name: Qiao, Lixian
Publisher: name: figshare
Year: 2022
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 5: Supplementary fig 5.
The `Great Debate': The Case for AGNs
Creators: name: Sanders, D. B.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We summarize the evidence from multiwavelength observations that the dominant power source in the majority of ultraluminous infrared galaxies (ULIGs) may be an active galactic nucleus (AGN). In the broader context of the debate, we also show that: 1. ULIGs are indeed a key stage in the transformation of merging gas-rich disks into ellipticals, 2. ULIGs are plausibly the precursors of quasi-stellar objects (QSOs), and 3. ULIGs do appear to be local templates of the high luminosity tail of major gas-rich mergers at z ~ 1-4.
description: LaTex, 18 pages with 4 embedded postscript figures and 3 tables. To appear in The Ringberg Workshop, `Ultraluminous Galaxies: Monsters or Babies' (Ringberg Castle, Sept, 1998), A&SS
A large mid-infrared spectroscopic and near-IR imaging survey of ULIRGs: their nature and evolution
Creators: name: Rigopoulou, D.
name: Spoon, H. W. W.
name: Genzel, R.
name: Lutz, D.
name: Moorwood, A. F. M.
name: Tran, Q. D.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present a low resolution mid-infrared spectroscopic survey of an unbiased sample of 62 Ultraluminous Infrared Galaxies (ULIRGs) using ISOPHOT-S on board ISO. For comparison we also present ISOPHOT-S spectra for 23 AGN and 15 starburst and normal galaxies. The line-to-continuum ratio of the 7.7 $μ$m PAH emission feature is used as a discriminator between starburst and AGN activity in ULIRGs. We find that the majority of ULIRGs are predominantly powered by starbursts. The ratio L$_{PAH}/$L$_{IR}$ for starburst dominated ULIRGs is similar to the one found for template starbursts.The shapes of the PAH features are sometimes unusual.Extinction has a noticeable effect on the PAH spectra of ULIRG starbursts. We have obtained high resolution near-infrared imaging for the Southern ISOPHOT-S ULIRGs to investigate their evolution stage. The majority (68%) of the ULIRGs imaged are double systems and all show distorted morphologies. Using separations for our work and from the literature, we have examined whether ULIRGs that are advanced mergers are more AGN-like. We have found no such evidence contrary to what is postulated by the classical evolutionary scenario. No correlation is found between the stage of merger in ULIRGs and their infrared luminosity.We also find that the total mass of interstellar gas, as estimated from the CO (1-0) luminosity, does not decrease with decreasing merger separation. When both an AGN and a starburst occur concurrently in ULIRGs, we find that the starburst dominates the luminosity output. We propose that the available gas reservoir and the individual structure of the interacting galaxies plays a major role in the evolution of the system.
description: 66 pages, 13 figures, accepted for publication in the Astronomical Journal (December 1999)
Patella nubecula Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Gastropoda
Pezizales
Patellidae
Patella
Patella nubecula

description: Patella nubecula [spec. nov.]
P. testa subovata rugosa alba rubro radiata, vertice ovato-perforato.
Habitat in M. Mediterraneo frequens.
Differt a praecedenti testa minore, altiore, alba rubro radiata, apertura minus oblonga & intus fusca.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 785, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
Fragmentation production of J/psi and psi' at the Tevatron
Creators: name: Doncheski, Michael A.
name: Fleming, Sean
name: Mangano, Michelangelo L.
Publisher: name: arXiv
Year: 1994
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We present a calculation of the charm and gluon fragmentation contributions to inclusive $J/ψ$ and $ψ'$ production at large transverse momentum at the Tevatron. For $ψ$ production, we include both fragmentation directly into $ψ$ and fragmentation into $χ_c$ followed by the radiative decay $χ_c \to ψ+ γ$. We find that fragmentation overwhelms the leading-order mechanisms for prompt $ψ$ production at large $p_T$, and that the dominant contributions come from fragmentation into $χ_c$. Our results are consistent with recent data on $ψ$ production from the CDF and D0 experiments. In the case of prompt $ψ'$ production, the dominant mechanism at large $p_T$ is charm fragmentation into $ψ'$. We find serious disagreement between our theoretical predictions and recent $ψ'$ data from the Tevatron.
description: 13 pages with 4 figures appended to end as TOPDRAWER files
Unveiling the Circumstellar Envelope and Disk: A Sub-Arcsecond Survey of Circumstellar Structures
Creators: name: Looney, Leslie W.
name: Mundy, Lee G.
name: Welch, W. J.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present the results of a 2.7 mm continuum interferometric survey of 24 young stellar objects in 11 fields. The target objects range from deeply embedded Class 0 sources to optical T Tauri sources. This is the first sub-arcsecond survey of the 2.7 mm dust continuum emission from young, embedded stellar systems. The images show a diversity of structure and complexity. The optically visible T Tauri stars (DG Tauri, HL Tauri, GG Tauri,and GM Aurigae) have continuum emission dominated by compact, less than 1", circumstellar disks. The more embedded near-infrared sources (SVS13 and L1551 IRS5) have continuum emission that is extended and compact. The embedded sources (L1448 IRS3, NGC1333 IRAS2, NGC1333 IRAS4, VLA1623, and IRAS 16293-2422) have continuum emission dominated by the extended envelope, typically more than 85%. In fact, in many of the deeply embedded systems it is difficult to uniquely isolate the disk emission component from the envelope extending inward to AU size scales. All of the target embedded objects are in multiple systems with separations on scales of 30" or less. Based on the system separation, we place the objects into three categories: separate envelope (separation > 6500 AU), common envelope (separation 150-3000 AU), and common disk (separation < 100 AU). These three groups can be linked with fragmentation events during the star formation process: separate envelopes from prompt initial fragmentation and the separate collapse of a loosely condensed cloud, common envelopes from fragmentation of a moderately centrally condensed spherical system, and common disk from fragmentation of a high angular momentum circumstellar disk.
description: 47 Pages, 18 Figures, ApJ accepted
On the RR Lyrae stars in globulars: V. the complete Near-Infrared (JHKs) census of omega Centauri RR Lyrae variables
Creators: name: Braga, V. F.
name: Stetson, P. B.
name: Bono, G.
name: Dall'Ora, M.
name: Ferraro, I.
name: Fiorentino, G.
name: Iannicola, G.
name: Marconi, M.
name: Marengo, M.
name: Monson, A. J.
name: Neeley, J.
name: Persson, S. E.
name: Beaton, R. L.
name: Buonanno, R.
name: Calamida, A.
name: Castellani, M.
name: Di Carlo, E.
name: Fabrizio, M.
name: Freedman, W. L.
name: Inno, L.
name: Madore, B. F.
name: Magurno, D.
name: Marchetti, E.
name: Marinoni, S.
name: Marrese, P.
name: Matsunaga, N.
name: Minniti, D.
name: Monelli, M.
name: Nonino, M.
name: Piersimoni, A. M.
name: Pietrinferni, A.
name: Prada-Moroni, P.
name: Pulone, L.
name: Stellingwerf, R.
name: Tognelli, E.
name: Walker, A. R.
name: Valenti, E.
name: Zoccali, M.
Publisher: name: arXiv
Year: 2018
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We present a new complete Near-Infrared (NIR, $JHK_s$) census of RR Lyrae stars (RRLs) in the globular $ω$ Cen (NGC 5139). We collected 15,472 $JHK_s$ images with 4-8m class telescopes over 15 years (2000-2015) covering a sky area around the cluster center of 60x34 arcmin$^2$. These images provided calibrated photometry for 182 out of the 198 cluster RRL candidates with ten to sixty measurements per band. We also provide new homogeneous estimates of the photometric amplitude for 180 ($J$), 176 ($H$) and 174 ($K_s$) RRLs. These data were supplemented with single-epoch $JK_s$ magnitudes from VHS and with single-epoch $H$ magnitudes from 2MASS. Using proprietary optical and NIR data together with new optical light curves (ASAS-SN) we also updated pulsation periods for 59 candidate RRLs. As a whole, we provide $JHK_s$ magnitudes for 90 RRab (fundamentals), 103 RRc (first overtones) and one RRd (mixed--mode pulsator). We found that NIR/optical photometric amplitude ratios increase when moving from first overtone to fundamental and to long-period (P>0.7 days) fundamental RRLs. Using predicted Period-Luminosity-Metallicity relations, we derive a true distance modulus of 13.674$\pm$0.008$\pm$0.038 mag (statistical error and standard deviation of the median)---based on spectroscopic iron abundances---and of 13.698$\pm$0.004$\pm$0.048 mag---based on photometric iron abundances. We also found evidence of possible systematics at the 5-10% level in the zero-point of the PLs based on the five calibrating RRLs whose parallaxes had been determined with HST
description: Accepted for publication in AJ (2018), 36 pages, 22 figures
Black-Hole X-Ray Transients: The Effect of Irradiation on Time-Dependent Accretion Disk Structure
Creators: name: Kim, Soon-Wook
name: Wheeler, J. Craig
name: Mineshige, Shin
Publisher: name: arXiv
Year: 1999
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Some effects of irradiation on time-dependent accretion-disk models for black hole X-ray novae are presented. Two types of irradiation are considered: direct irradiation from the inner hot disk and indirect irradiation as might be reflected by a corona or chromosphere above the disk. The shadowing effect of the time-dependent evolution of the disk height and consequent blocking of the outer disk by the inner and middle portions of the disk from the direct irradiation is included. The direct irradiation of the disk by inner layers where the soft X-ray flux is generated is found to have only a small effect on the outer disk because of shadowing. Mild indirect irradiation that flattens, but otherwise does not affect the light curve substantially, still has interesting non-linear effects on the structure of the disk as heating and cooling waves propagate. The irradiated disks do not always make simple transitions between the hot and cold states, but can linger at intermediate temperatures or even return temporarily to the hot state, depending on the irradiation and the activity in adjacent portions of the disk.
description: 12 pages, 8 figures
Supplementary file 1: Workflow model for the digitization of mudrocks
Creators: name: Buckman, Jim
name: Mahoney, Carol
name: Shereef Bankole
name: Couples, Gary
name: Lewis, Helen
name: Wagner, Thomas
name: März, Christian
name: Blanco, Vladimir
name: Dorrik Stow
Publisher: name: Geological Society of London
Year: 2018
Subjects: subject: Geology
subject: FOS: Earth and related environmental sciences

description: Typical workflows based on the specific software used.
title: 02_0599
Creators: name: Wesley Baldwin, John
name: Baldwin, John W.
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2018
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris

description: L'ensemble de ces notes ont été crée par John Baldwin lors d'une de ses premières périodes de résidence à Paris. Ces documents comprennent tous les magistri qu’il avait pu rencontrer dans ses sources. Aux XIIème et XIIIème siècles, les universités n'existant pas encore, le titre de magister s'il évoque certainement une compétence n'est pas rattaché de façon systématique au passage par les écoles. De surcroît, les magistris sont le plus souvent désignés par leur seul prénom. La lecture de ces données est donc difficile et suppose un long travail pour tenter d'identifier un individu auquel on pourrait rattacher plusieurs mentions. John Baldwin avait donc renoncé à utiliser ces données pour donner un prolongement à sa magnifique étude sur les gradués d'université et leur emploi par les Capétiens et les Plantagenêts. Néanmoins, il a conservé ces données et elles sont potentiellement très utile dans le cadre de Studium, comme le sont toutes les mentions dans les volumes des Fasti Ecclesiae Gallicanae de chanoines portant ce titre de magister sans autres précisions. L'ampleur des dépouillements rend ces données très utiles et nous devons une grande reconnaissance à John Baldwin pour avoir pris la peine de faire photocopier ses fiches et de nous les avoir transmises amicalement.
Les données ainsi que les images des fiches sont accessibles sur le site Internet à l'adresse suivante : http://studium-baldwin.lamop.fr/.
Les transcriptions des fiches ont été effectuées par des étudiants de Paris 1 Panthéon - Sorbonne mais elles n'ont pas été corrigées par la suite.
description: Relation: https://lamop.hypotheses.org/
Vanilla martinezii Soto-Arenas
Creators: name: Damián-Parizaca, Alexander
name: Karremans, Adam P.
name: Mitidieri-Rivera-Rivera, Nicole
name: Cameron, Kenneth M.
Publisher: name: Zenodo
Year: 2025
Subjects: Biodiversity
Taxonomy
Plantae
Tracheophyta
Liliopsida
Asparagales
Orchidaceae
Vanilla
Vanilla martinezii

description: 14.Vanilla martineziiSoto-Arenas (Soto-Arenas and Dressler 2010: 320)
Fig. 2 E
Type.
GUATEMALA – Izabal • Livingston, El Golfete, a 20.4 km al NE de Río Dulce por lancha camino a Calix; 26 Jul. 2003; E. Martinez & D. Alvarez 36410; lectotype (designated here): MEXU! [MEXU 01478369]; isolectotypes: MEXU! [MEXU 01478370], AMO! [ESP 118178], BIGU not found, MO not found.
Notes.
Soto-Arenas and Dressler (2010) originally designated the specimen at MEXU as the holotype for Vanilla martinezii while identifying three isotypes located at AMO, BIGU, and MO. Upon examining the type collection at MEXU, we found two sheets under the same collector’s number, with no indication that they were part of a single preparation. Consequently, a lectotype designation is required. Here, we designate the sheet bearing a flower bud as the lectotype. Furthermore, after reviewing the AMO spirit collection, we identify a jar labelled “ E. Martinez s. n. ” with a single flower. Based on morphological congruence with the flower illustrated in the species’ original description (Soto-Arenas and Dressler 2010: fig. 10), we propose that this specimen most likely belongs to the original material used by Soto-Arenas. The illustration, as noted in the legend, is partially based on the type specimen (flower + dissection 1 + L-shaped column), E. Martinez 22790 (second column + dissection 2, including a petal, lateral sepal, and half of the lip), and M. Soto 8602 a (plant with fruits). It is likely that the flower preserved in the AMO spirit collection corresponds to the specimen Soto-Arenas referenced as “ iso. AMO! ” and we hereby designate it as an isolectotype. We could not locate the isotypes at BIGU and MO.
description: Published as part of Damián-Parizaca, Alexander, Karremans, Adam P., Mitidieri-Rivera-Rivera, Nicole & Cameron, Kenneth M., 2025, Towards a monograph of membranaceous Vanillas: a nomenclatural revision of Vanilla subgen. Vanilla (Vanilloideae, Orchidaceae), pp. 111-121 in Plant Ecology and Evolution 158 (1) on pages 111-121, DOI: 10.5091/plecevo.140667
Geometric and LP-based heuristics for the quadratic travelling salesman problem
Creators: name: Staněk, Rostislav
name: Greistorfer, Peter
name: Ladner, Klaus
name: Pferschy, Ulrich
Publisher: name: arXiv
Year: 2018
Subjects: subject: Discrete Mathematics (cs.DM)
subject: FOS: Computer and information sciences
subject: G.2.1
subject: 90C27

description: A generalization of the classical TSP is the so-called quadratic travelling salesman problem (QTSP), in which a cost coefficient is associated with the transition in every vertex, i.e. with every pair of edges traversed in succession. In this paper we consider two geometrically motivated special cases of the QTSP known from the literature, namely the angular-metric TSP, where transition costs correspond to turning angles in every vertex, and the angular-distance-metric TSP, where a linear combination of turning angles and Euclidean distances is considered. At first we introduce a wide range of heuristic approaches, motivated by the typical geometric structure of optimal solutions. In particular, we exploit lens-shaped neighborhoods of edges and a decomposition of the graph into layers of convex hulls, which are then merged into a tour by a greedy-type procedure or by utilizing an ILP model. Secondly, we consider an ILP model for a standard linearization of QTSP and compute fractional solutions of a relaxation. By rounding we obtain a collection of subtours, paths and isolated points, which are combined into a tour by various strategies, all of them involving auxiliary ILP models. Finally, different improvement heuristics are proposed, most notably a matheuristic which locally reoptimizes the solution for rectangular sectors of the given point set by an ILP approach. Extensive computational experiments for benchmark instances from the literature and extensions thereof illustrate the Pareto-efficient frontier of algorithms in a (running time, objective value)-space. It turns out that our new methods clearly dominate the previously published heuristics.
Supplementary file 2: Workflow model for the digitization of mudrocks
Creators: name: Buckman, Jim
name: Mahoney, Carol
name: Shereef Bankole
name: Couples, Gary
name: Lewis, Helen
name: Wagner, Thomas
name: März, Christian
name: Blanco, Vladimir
name: Dorrik Stow
Publisher: name: Geological Society of London
Year: 2018
Subjects: subject: Geology
subject: FOS: Earth and related environmental sciences

description: Typical workflows based on the specific software used.
Dentalium minutu Linnaeus, 1758, spec. nov.
Creators: name: Linnaeus, Carolus
Publisher: name: Laurentius Salvius
Year: 1758
Subjects: Biodiversity
Taxonomy
Animalia
Mollusca
Scaphopoda
Dentaliida
Dentaliidae
Dentalium
Dentalium minutu

description: Dentalium minutu [spec. nov.]
D. testa tereti erectiuscula laevi minuta.
Planc. conch. t. 2. f. 2.
Habitat in M. Mediterraneo.
Testa tam parva, ut genus nisi armatis oculis non conspiciatur.
description: Published as part of Linnaeus, Carolus, 1758, Systema Naturae per regna tria naturae: secundum classes, ordines, genera, species, cum characteribus, differentiis, synonymis, locis, Stockholm :Laurentius Salvius on page 786, DOI: 10.5962/bhl.title.542, http://zenodo.org/record/3922206
OGLE observations of four X-ray binary pulsars in the SMC
Creators: name: Coe, M. J.
name: Orosz, J. A.
Publisher: name: arXiv
Year: 1999
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: This paper presents analysis and interpretation of OGLE photometric data of four X-ray binary pulsar systems in the Small Magellanic Cloud: 1WGA J0054.9-7226, RX J0050.7-7316, RX J0049.1-7250, and 1SAX J0103.2-7209. In each case, the probable optical counterpart is identified on the basis of its optical colours. In the case of RX J0050.7-7316 the regular modulation of its optical light curve appears to reveal an ellipsoidal modulation with a period of 1.416 days. Using reasonable masses for the neutron star and the B star, we show that the amplitude and relative depths of the minima of the I-band light curve of RX J0050.7-7316 can be matched with an ellipsoidal model where the B star nearly fills its Roche lobe. For mass ratios in the range of 0.12 to 0.20, the corresponding best-fitting inclinations are about 55 degrees or larger. The neutron star would be eclipsed by the B star at inclinations larger than 60 degrees for this particular mass ratio range. Thus RX J0050.7-7316 is a good candidate system for further study. In particular, we would need additional photometry in several colours, and most importantly, radial velocity data for the B star before we could draw more quantitative conclusions about the component masses.
Supplementary file 3: Workflow model for the digitization of mudrocks
Creators: name: Buckman, Jim
name: Mahoney, Carol
name: Shereef Bankole
name: Couples, Gary
name: Lewis, Helen
name: Wagner, Thomas
name: März, Christian
name: Blanco, Vladimir
name: Dorrik Stow
Publisher: name: Geological Society of London
Year: 2018
Subjects: subject: Geology
subject: FOS: Earth and related environmental sciences

description: Typical workflows based on the specific software used.