cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Diagnostics for multiple imputation in Stata
Creators: name: Eddings, Wesley
name: Marchenko, Yulia
name: Eddings, Wesley
name: Marchenko, Yulia
Publisher: name: Unknown
Year: 2012
Subjects: subject: Research Methods/ Statistical Methods
subject: midiagplots
subject: multiple imputation
subject: diagnostics
subject: model checking
subject: imputed values
subject: missing data
subject: missing at random

description: Our new command midiagplots makes diagnostic plots for multiple imputations created by mi impute. The plots compare the distribution of the imputed values with that of the observed values so that problems with the imputation model can be corrected before the imputed data are analyzed. We include an example and suggest extensions to other diagnostics.
Quadratic Scaling Bosonic Path Integral Molecular Dynamics
Creators: name: Feldman, Yotam M. Y.
name: Hirshberg, Barak
Publisher: name: arXiv
Year: 2023
Subjects: subject: Computational Physics (physics.comp-ph)
subject: Other Condensed Matter (cond-mat.other)
subject: Quantum Gases (cond-mat.quant-gas)
subject: Chemical Physics (physics.chem-ph)
subject: FOS: Physical sciences

description: Bosonic exchange symmetry leads to fascinating quantum phenomena, from exciton condensation in quantum materials to the superfluidity of liquid Helium-4. Unfortunately, path integral molecular dynamics (PIMD) simulations of bosons are computationally prohibitive beyond $\mathord{\sim} 100$ particles, due to a cubic scaling with the system size. We present an algorithm that reduces the complexity from cubic to quadratic, allowing the first simulations of thousands of bosons using PIMD. Our method is orders of magnitude faster, with a speedup that scales linearly with the number of particles and the number of imaginary time slices (beads). Simulations that would have otherwise taken decades can now be done in days. In practice, the new algorithm eliminates most of the added computational cost of including bosonic exchange effects, making them almost as accessible as PIMD simulations of distinguishable particles.
Analysis of Obstacle based Probabilistic RoadMap Method using Geometric Probability
Creators: name: Bera, Titas
name: Bhat, M. Seetharama
name: Ghose, Debasish
Publisher: name: arXiv
Year: 2019
Subjects: subject: Robotics (cs.RO)
subject: FOS: Computer and information sciences

description: Sampling based planners have been successful in robot motion planning, with many degrees of freedom, but still remain ineffective in the presence of narrow passages within the configuration space. There exist several heuristics, which generate samples in the critical regions and improve the efficiency of probabilistic roadmap planners. In this paper, we present an evaluation of success probability of one such heuristic method, called obstacle based probabilistic roadmap planners or OBPRM, using geometric probability theory. The result indicates that the probability of success of generating free sample points around the surface of the $n$ dimensional configuration space obstacle is directly proportional to the surface area of the obstacles.
description: Conference Paper
Rotation and outflow in the central kiloparsec of the water megamaser galaxies IC 2560, NGC 1386, NGC 1052, and Mrk 1210
Creators: name: Schulz, H.
name: Henkel, C.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Optical emission-line profiles were evaluated in order to explore the structure of galactic nuclei containing H2O megamaser sources. Galactic rotation and outflow of narrow-line gas are common features of this sample of water megamaser galaxies. All decomposed line-systems exhibit AGN typical line ratios. Recent detections of H2O megamasers in starburst galaxies and the apparent asssociation of one megamaser with a Seyfert 1 AGN suggest that megamasers can possibly be triggered by optically detectable outflows. The frequently encountered edge-on geometry favoring large molecular column densities appears to be verified for NGC 1386 and IC 2560. For NGC 1052 and Mrk 1210, maser emission triggered by the optically detected outflow components cannot be ruled out.
description: 23 pages, 26 Postscript figures, A&A Main Journal
Anomalous transverse optic phonons in SnTe and PbTe -- revisited
Creators: name: Li, Zehua
name: Li, Shasha
name: Castellan, John-Paul
name: Heid, Rolf
name: Xiao, Yu
name: Zhao, Li-Dong
name: Chen, Yue
name: Weber, Frank
Publisher: name: arXiv
Year: 2022
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: We present a study of the soft transverse optic phonon mode in SnTe in comparison to the corresponding mode in PbTe using inelastic neutron scattering and ab-initio lattice dynamical calculations. In contrast to previous reports our calculations predict that the soft mode in SnTe features a strongly asymmetric spectral weight distribution qualitatively similar to that found in PbTe. Experimentally, we find that the overall width in energy of the phonon peaks is comparable in our neutron scattering spectra for SnTe and PbTe. We observe the well-known double-peak-like signature of the TO mode in PbTe even down to $T$ = 5 K questioning its proposed origin purely based on phonon-phonon scattering. The proximity to the incipient ferroelectric transition in PbTe likely plays an important role not included in current models.
Combining Machine Learning with Knowledge Engineering to detect Fake News in Social Networks-a survey
Creators: name: Ahmed, Sajjad
name: Hinkelmann, Knut
name: Corradini, Flavio
Publisher: name: arXiv
Year: 2022
Subjects: subject: Artificial Intelligence (cs.AI)
subject: FOS: Computer and information sciences

description: Due to extensive spread of fake news on social and news media it became an emerging research topic now a days that gained attention. In the news media and social media the information is spread highspeed but without accuracy and hence detection mechanism should be able to predict news fast enough to tackle the dissemination of fake news. It has the potential for negative impacts on individuals and society. Therefore, detecting fake news on social media is important and also a technically challenging problem these days. We knew that Machine learning is helpful for building Artificial intelligence systems based on tacit knowledge because it can help us to solve complex problems due to real word data. On the other side we knew that Knowledge engineering is helpful for representing experts knowledge which people aware of that knowledge. Due to this we proposed that integration of Machine learning and knowledge engineering can be helpful in detection of fake news. In this paper we present what is fake news, importance of fake news, overall impact of fake news on different areas, different ways to detect fake news on social media, existing detections algorithms that can help us to overcome the issue, similar application areas and at the end we proposed combination of data driven and engineered knowledge to combat fake news. We studied and compared three different modules text classifiers, stance detection applications and fact checking existing techniques that can help to detect fake news. Furthermore, we investigated the impact of fake news on society. Experimental evaluation of publically available datasets and our proposed fake news detection combination can serve better in detection of fake news.
description: 12 pages
MOESM4 of Sensitivity and specificity of an algorithm based on medico-administrative data to identify hospitalized patients with major bleeding presenting to an emergency department
Creators: name: Oger, Emmanuel
name: Marie-Anne Botrel
name: Juchault, Catherine
name: Bouget, Jacques
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer

description: Additional file 4. Main discharge diagnoses compared to emergency ward (EW) ICD-10 code for 107 stays where emergency ward diagnosis was coded as hemorrhage but not the main discharge diagnosis (false negative).
Language as an Evolving Word Web
Creators: name: Dorogovtsev, S. N.
name: Mendes, J. F. F.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: Human language can be described as a complex network of linked words. In such a treatment, each distinct word in language is a vertex of this web, and neighboring words in sentences are connected by edges. It was recently found (Ferrer and Solé) that the distribution of the numbers of connections of words in such a network is of a peculiar form which includes two pronounced power-law regions. Here we treat language as a self-organizing network of interacting words. In the framework of this concept, we completely describe the observed Word Web structure without fitting.
description: 4 pages revtex, 2 figures
A technique to jointly estimate depth and depth uncertainty for unmanned aerial vehicles
Creators: name: Fonder, Michaël
name: Van Droogenbroeck, Marc
Publisher: name: arXiv
Year: 2023
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Artificial Intelligence (cs.AI)
subject: Robotics (cs.RO)
subject: FOS: Computer and information sciences

description: When used by autonomous vehicles for trajectory planning or obstacle avoidance, depth estimation methods need to be reliable. Therefore, estimating the quality of the depth outputs is critical. In this paper, we show how M4Depth, a state-of-the-art depth estimation method designed for unmanned aerial vehicle (UAV) applications, can be enhanced to perform joint depth and uncertainty estimation. For that, we present a solution to convert the uncertainty estimates related to parallax generated by M4Depth into uncertainty estimates related to depth, and show that it outperforms the standard probabilistic approach. Our experiments on various public datasets demonstrate that our method performs consistently, even in zero-shot transfer. Besides, our method offers a compelling value when compared to existing multi-view depth estimation methods as it performs similarly on a multi-view depth estimation benchmark despite being 2.5 times faster and causal, as opposed to other methods. The code of our method is publicly available at https://github.com/michael-fonder/M4DepthU .
description: The code is available at https://github.com/michael-fonder/M4DepthU
Additional file 5 of TOPDRIVER: the novel identifier of cancer driver genes in Gastric cancer and Melanoma
Creators: name: Razavi, Seyed
name: Rami, Farzaneh
name: Seyede Razavi
name: Changiz Eslahchi
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer

description: The status of alteration of potential driver genes in the cancers. (PDF 267 kb)
Renormalization group treatment of the scaling properties of finite systems with subleading long-range interaction
Creators: name: Chamati, H.
name: Dantchev, D. M.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: The finite size behavior of the susceptibility, Binder cumulant and some even moments of the magnetization of a fully finite O(n) cubic system of size L are analyzed and the corresponding scaling functions are derived within a field-theoretic $ε$-expansion scheme under periodic boundary conditions. We suppose a van der Waals type long-range interaction falling apart with the distance r as $r^{-(d+σ)}$, where $2
description: 14 pages, revtex
Dynamical Theory for Adaptive Systems
Creators: name: Pham, Tuan Minh
name: Kaneko, Kunihiko
Publisher: name: arXiv
Year: 2023
Subjects: subject: Populations and Evolution (q-bio.PE)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Adaptation and Self-Organizing Systems (nlin.AO)
subject: Biological Physics (physics.bio-ph)
subject: FOS: Biological sciences
subject: FOS: Physical sciences

description: The study of adaptive dynamics, involving many degrees of freedom on two separated timescales, one for fast changes of state variables and another for the slow adaptation of parameters controlling the former's dynamics is crucial for understanding feedback mechanisms underlying evolution and learning. We present a path-integral approach à la Martin-Siggia-Rose-De Dominicis-Janssen (MSRDJ) to analyse nonequilibrium phase transitions in such dynamical systems. As an illustration, we apply our framework to the adaptation of gene-regulatory networks under a dynamic genotype-phenotype map: phenotypic variations are shaped by the fast stochastic gene-expression dynamics and are coupled to the slowly evolving distribution of genotypes, each encoded by a network structure. We establish that under this map, genotypes corresponding to reciprocal networks of coherent feedback loops are selected within an intermediate range of environmental noise, leading to phenotypic robustness.
description: 30 pages and 2 figures
Domain walls and deconfinement: a semiclassical picture of discrete anomaly inflow
Creators: name: Cox, Andrew A.
name: Poppitz, Erich
name: Wong, Samuel S. Y.
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: High Energy Physics - Lattice (hep-lat)
subject: FOS: Physical sciences

description: We study the physics of quark deconfinement on domain walls in four-dimensional supersymmetric SU(N) Yang-Mills theory, compactified on a small circle with supersymmetric boundary conditions. We numerically examine the properties of BPS domain walls connecting vacua k units apart. We also determine their electric fluxes and use the results to show that Wilson loops of any nonzero N-ality exhibit perimeter law on all k-walls. Our results confirm and extend, to all N and k, the validity of the semiclassical picture of deconfinement of Anber, Sulejmanpasic and one of us (EP), arXiv:1501.06773, providing a microscopic explanation of mixed 0-form/1-form anomaly inflow.
description: 49 pages, 18 figures, references added, final version, text and figures identical to published
The development and application of a novel reagent for fixing red blood cells with glutaraldehyde and paraformaldehyde
Creators: name: Li, Xinyang
name: Li, Miyang
name: Wang, Yuhong
name: Duan, Shengbao
name: Wang, Hongmei
name: Li, Yong
name: Cai, Zhonghe
name: Wang, Ruiyao
name: Gao, Shuang
name: Qu, Yan
name: Wang, Tianxia
name: Cheng, Fei
name: Liu, Tiemei
Publisher: name: Taylor & Francis
Year: 2023
Subjects: subject: Biophysics
subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Hematology
subject: Infectious Diseases
subject: FOS: Health sciences

description: The currently employed red blood cell reagents have a short shelf life. Some hospitals with a small number of specimens will be unable to utilize them within the validity period, resulting in a substantial increase in the purchase price. Therefore, the method of developing long-term red blood cell reagents is a problem worthy of further study. In this experiment, the type and concentration of the red blood cell reagent treatment solution were evaluated based on the red blood cell antigen concentration 24 h after treatment. In addition, the qualified glutaraldehyde/paraformaldehyde reagent was stored for six months, and five red blood cell indices were measured every month. At the same time, the detection indices of treated red blood cell reagents and untreated red blood cell reagents were compared. It was discovered that treated red blood cells containing 0.005% GA and 0.05% PFA were more suitable for the preservation of red blood cells than other treated concentrations, and the preservation time could reach six months. The test tube method (n = 24) and microcolumn gel card (n = 35) were used to determine the accuracy of the treated blood cells containing 0.005% glutaraldehyde +0.05% paraformaldehyde, with an accuracy of 100%. This experiment resulted in the development of a novel reagent for treating red blood cells with glutaraldehyde/paraformaldehyde fixed solution that can effectively prolong its storage time by two to three times that of red blood cell reagents currently on the market.
Additional file 2 of Gut microbiome variation modulates the effects of dietary fiber on host metabolism
Creators: name: Murga-Garrido, Sofia M.
name: Qilin Hong
name: Tzu-Wen L. Cross
name: Hutchison, Evan R.
name: Han, Jessica
name: Thomas, Sydney P.
name: Vivas, Eugenio I.
name: Denu, John
name: Ceschin, Danilo G.
name: Tang, Zheng-Zheng
name: Rey, Federico E.
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 1: Fig. S1. Screening phase. 16S rRNA gene sequence analysis of fecal samples from human donors and recipient mice. A. Principal Coordinates Analysis (PCoA) of unweighted UniFrac (uwUF) distances from eight human fecal samples collected for Wisconsin Longevity Study. B. Bacterial relative abundance summarized at the phylum level. C. Percentage of genera shared between each donor fecal sample and its corresponding recipient mice cecal samples. Number of mice colonized for each fecal donor is reported under each bar. D. Percent relative abundance of the fecal donor community captured in the mouse cecal samples. E. UwUF distances between donor fecal samples and each engrafted cecal community. Averages of distances between corresponding human donor-mouse engrafted community are indicated as DONOR. Average of uwUF distances between non-matched donor-mouse community are indicated as OTHER. F. PCoA of uwUF distances of the eight human fecal samples engrafted in the mouse cecum. Circles with the same colors indicate biological replicates colonized with the same community. G. Alpha-diversity as determined by Faith’s phylogenetic diversity of each of the eight engrafted communities. ***P < 0.001.
Theoretical model for the structural phase transition at the metal- insulator transition in polymerized KC60
Creators: name: Verberck, B.
name: Nikolaev, A. V.
name: Michel, K. H.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The recently discovered structural transition in polymerized KC60 at about 50 K results in a doubling of the unit cell volume and accompanies the metal-insulator transition. Here we show that the (a+c,b,a-c) superstructure results from small orientational charge density waves along the polymer chains and concomitant displacements of the surrounding K+ ions. The effect is specific for the space group Pmnn of KC60 and is absent in Rb- and CsC60 (space group I2/m). The mechanism is relevant for the metal-insulator transition.
description: 14 pages, 5 figures, and 3 tables
Additional file 30 of Gut microbiome variation modulates the effects of dietary fiber on host metabolism
Creators: name: Murga-Garrido, Sofia M.
name: Qilin Hong
name: Tzu-Wen L. Cross
name: Hutchison, Evan R.
name: Han, Jessica
name: Thomas, Sydney P.
name: Vivas, Eugenio I.
name: Denu, John
name: Ceschin, Danilo G.
name: Tang, Zheng-Zheng
name: Rey, Federico E.
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 29. Supplemental results. Effects of microbiota-fiber interactions on liver histone posttranslational modifications.
Porous SiO$_2$ coated dielectric metasurface with consistent performance independent of environmental conditions
Creators: name: Geromel, René
name: Weinberger, Christian
name: Brormann, Katja
name: Tiemann, Michael
name: Zentgraf, Thomas
Publisher: name: arXiv
Year: 2022
Subjects: subject: Optics (physics.optics)
subject: Applied Physics (physics.app-ph)
subject: FOS: Physical sciences

description: With the rapid advances of functional dielectric metasurfaces and their integration on on-chip nanophotonic devices, the necessity of metasurfaces working in different environments, especially in biological applications, arose. However, the metasurfaces' performance is tied to the unit cell's efficiency and ultimately the surrounding environment it was designed for, thus reducing its applicability if exposed to altering refractive index media. Here, we report a method to increase a metasurface's versatility by covering the high-index metasurface with a low index porous SiO$_2$ film, protecting the metasurface from environmental changes while keeping the working efficiency unchanged. We show, that a covered metasurface retains its functionality even when exposed to fluidic environments.
Additional file 4 of TOPDRIVER: the novel identifier of cancer driver genes in Gastric cancer and Melanoma
Creators: name: Razavi, Seyed
name: Rami, Farzaneh
name: Seyede Razavi
name: Changiz Eslahchi
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: Computational Biology

description: The Main characteristics of potential driver genes. The main characteristics of our potential genes based on the function and gene neighborhood criteria. The last two column indicate the gene mutation rate in the gastric cancer and the KEGG pathways which are related to our selected genes. (PDF 231 kb)
Additional file 3 of Gut microbiome variation modulates the effects of dietary fiber on host metabolism
Creators: name: Murga-Garrido, Sofia M.
name: Qilin Hong
name: Tzu-Wen L. Cross
name: Hutchison, Evan R.
name: Han, Jessica
name: Thomas, Sydney P.
name: Vivas, Eugenio I.
name: Denu, John
name: Ceschin, Danilo G.
name: Tang, Zheng-Zheng
name: Rey, Federico E.
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 2: Fig. S2. Variation in cecal short-chain fatty acids among transplanted communities. Cecal levels of (A) butyrate; (B) acetate; and (C) propionate (μmoles/g wet weight) for each the eight transplanted groups of mice described in Fig. S1.
Status of Chemical Equilibrium in Relativistic Heavy Ion Collisions
Creators: name: Cleymans, Jean
Publisher: name: arXiv
Year: 2002
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Recent work on chemical equilibrium in heavy ion collisions is reviewed. The energy dependence of thermal parameters is discussed. The centrality dependence of thermal parameters at SPS energies is presented.
description: 7 pages, 7 Postscript figures
Additional file 4 of Gut microbiome variation modulates the effects of dietary fiber on host metabolism
Creators: name: Murga-Garrido, Sofia M.
name: Qilin Hong
name: Tzu-Wen L. Cross
name: Hutchison, Evan R.
name: Han, Jessica
name: Thomas, Sydney P.
name: Vivas, Eugenio I.
name: Denu, John
name: Ceschin, Danilo G.
name: Tang, Zheng-Zheng
name: Rey, Federico E.
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 3: Fig. S3. Variation in predicted metabolic capacity among engrafted gut communities. Principal Coordinates Analysis (PCoA) of Bray Curtis dissimilarity using the PICRUSt2 predicted metabolic functions of the eight transplanted human microbiota samples used in this study. Circles with the same colors indicate biological replicates colonized with the same community.
Additional file 3 of TOPDRIVER: the novel identifier of cancer driver genes in Gastric cancer and Melanoma
Creators: name: Razavi, Seyed
name: Rami, Farzaneh
name: Seyede Razavi
name: Changiz Eslahchi
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: Plant Biology

description: TOPDRIVER melanoma genes and their p-values. (PDF 35 kb)
SICANE: a Detector Array for the Measurement of Nuclear Recoil Quenching Factors using Monoenergetic Neutron Beam
Creators: name: Simon, E.
name: Berge, L.
name: Broniatowski, A.
name: Bouvier, R.
name: Chambon, B.
name: De Jesus, M.
name: Drain, D.
name: Dumoulin, L.
name: Gascon, J.
name: Hadjout, J. P.
name: Juillard, A.
name: Martineau, O.
name: Pastor, C.
name: Stern, M.
name: Vagneron, L.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: SICANE is a neutron scattering multidetector facility for the determination of the quenching factor (ratio of the response to nuclear recoils and to electrons) of cryogenic detectors used in direct WIMP searches. Well collimated monoenergetic neutron beams are obtained with inverse (p,n) reactions. The facility is described, and results obtained for the quenching factors of scintillation in NaI(Tl) and of heat and ionization in Ge are presented.
description: 30 pages, Latex, 11 figures. Submitted to NIM A
MOESM1 of Surface rupture and characteristics of a fault associated with the 2011 and 2016 earthquakes in the southern Abukuma Mountains, northeastern Japan, triggered by the Tohoku-Oki earthquake
Creators: name: Keitaro Komura
name: Aiyama, Kotaro
name: Nagata, Takahiro
name: Sato, Hiroshi
name: Yamada, Akihiro
name: Yasuhira Aoyagi
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Additional file 1: Fig. S1. Schematic diagram showing the differences in incidence angles and resulting LOS values between PALSAR (2011 event) and PALSAR-2 (2016 and post-2016 event). Estimated difference in vertical offsets is ~ 2.7%, which is considered negligible. Fig. S2. Geologic map of the study area adapted from Kubo et al. (2007); location in Fig. 1. Also shown are small notches and wind gaps on ridge crests as well as fluvial terraces, identified in aerial photographs and a lidar DEM. Fig. S3. MPI-RRIM maps (locations in Fig. 2a) based on 2-m lidar DEMs. Location of 2016 surface ruptures and minor cracks, FFZs, subtle small notches, and wind gaps on ridge crests are shown. Fig. S4. Photographs of a the Mochiyama trench excavation, b the Koyama Dam FFZ, and c the Wakaguri FFZ, fresh slickenlines in gouge of d the Mochiyama trench and e the Koyama Dam FFZ, f displaced clay fragments within gouge of the Koyama Dam FFZ, and g subtle slickenlines in gouge of the Wakaguri FFZ. Fig. S5. Photomosaics of the a east wall and b west wall of the Mochiyama trench with fiducial grid overlay. Sketch log of this trench is shown in Fig. 7.
Enneapterygius flavoccipitis Shen and Wu 1994
Creators: name: Ho, Hsuan-Ching
name: Shao, Kwang-Tsao
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Perciformes
Tripterygiidae
Enneapterygius
Enneapterygius flavoccipitis

description: 246. Enneapterygius flavoccipitis Shen and Wu, 1994:8, fig. 6
Holotype: NTUM 07836 (23.3), Ho–bi–hou 23 May 1991.
Paratype: NTUM 07837 (1, 23.0), same as holotype, NTUM 07842 (1, 25.9), Liu–chiu, 8 Nov. 1990, USNM 329659 (formly NTUM 7847, 1, 25.3), Liu–chiu, 8 Nov. 1990.
description: Published as part of Ho, Hsuan-Ching & Shao, Kwang-Tsao, 2011, 2957, pp. 1-74 in Zootaxa 2957 on page 52
Fingerprints of nonextensive thermodynamics in a long-range Hamiltonian system
Creators: name: Latora, V.
name: Rapisarda, A.
name: Tsallis, C.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Astrophysics (astro-ph)
subject: Nuclear Experiment (nucl-ex)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We study the dynamics of a Hamiltonian system of N classical spins with infinite-range interaction. We present numerical results which confirm the existence of metaequilibrium Quasi Stationary States (QSS), characterized by non-Gaussian velocity distributions, anomalous diffusion, Lévy walks and dynamical correlation in phase-space. We show that the Thermodynamic Limit (TL) and the Infinite-Time Limit (ITL) do not commute. Moreover, if the TL is taken before the ITL the system does not relax to the Boltzmann-Gibbs equilibrium, but remains in this new equilibrium state where nonextensive thermodynamics seems to apply.
description: ReVteX, 10 pages, 5 ps figures, talk presented by V. Latora at NEXT 2001. Revised version with improved figs and updated refs. To be published in Physica A
Shape of a liquid front upon dewetting
Creators: name: Seemann, Ralf
name: Herminghaus, Stephan
name: Jacobs, Karin
Publisher: name: arXiv
Year: 2001
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: We examine the profile of a liquid front of a film that is dewetting a solid substrate. Since volume is conserved, the material that once covered the substrate is accumulated in a rim close to the three phase contact line. Theoretically, such a profile of a Newtonian liquid resembles an exponentially decaying harmonic oscillation that relaxes into the prepared film thickness. For the first time, we were able to observe this behavior experimentally. A non-Newtonian liquid - a polymer melt - however, behaves differently. Here, viscoelastic properties come into play. We will demonstrate that by analyzing the shape of the rim profile. On a nm scale, we gain access to the rheology of a non-Newtonian liquid.
description: 4 pages, 4 figures
Spatial Solitons and Anderson Localization
Creators: name: Staliunas, Kestutis
Publisher: name: arXiv
Year: 2002
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: Stochastic (Anderson) localization is the spatial localization of the wave-function of quantum particles in random media. We show, that a corresponding phenomenon can stabilize spatial solitons in optical resonators: spatial solitons in resonators with randomly distorted mirrors are more stable than in perfect mirror resonators. We demonstrate the phenomenon numerically, by investigating solitons in lasers with saturable absorber, and analytically by deriving and analyzing coupled equations of spatially coherent and incoherent field components.
description: submitted to Phys.Rev.A
MOESM3 of Sensitivity and specificity of an algorithm based on medico-administrative data to identify hospitalized patients with major bleeding presenting to an emergency department
Creators: name: Oger, Emmanuel
name: Marie-Anne Botrel
name: Juchault, Catherine
name: Bouget, Jacques
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer
subject: Computational Biology

description: Additional file 3. Diagnosis as coded in emergency ward and main discharge diagnosis for 14 hospital stays (not identify as bleeding event by computerized request on electronic health records from emergency ward using hemorrhagic-related diagnostic codes and specific emergency therapies) out of 155 false positives.
Current and future applications of Reverberation-mapped quasars in Cosmology
Creators: name: Panda, Swayamtrupta
name: Martínez-Aldama, Mary Loli
name: Zajaček, Michal
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: Reverberation mapping technique is an important milestone in AGN demographics, kinematics and the structure of the Broad Line Region (BLR) based on the time-delay response between the continuum and emission line. The time delay is directly related to the size of BLR which is related to the continuum luminosity of the source, producing the well-known Radius-Luminosity (RL) relation. The majority of sources have been monitored for their H$β$ emission line in low redshift sources ($z<0.1$), while there are some attempts using the MgII line for higher redshifts. We present a recent MgII monitoring for the quasar CTS C30.10 ($z=0.90$) observed with the 10-meter SALT, for which RL scaling based on MgII holds within measurement and time-delay uncertainties. One of the most important advantages of reverberation mapping technique is the independent determination to the distant source, and considering the large range of redshifts and luminosities found in AGNs, their application to cosmology is promising. However, recently it has been found that highly accreting sources show the time delays shorter than expected from RL relation. We propose correction for this effect using a sample of 117 H$β$ reverberating-mapped AGNs with $0.02
description: 26 pages, 10 figures, accepted in Frontiers in Astronomy and Space Sciences (section: Quasars in Cosmology)
Neutrino Induced Upward Going Muons from a Gamma Ray Burst in a Neutrino Telescope of Km^2 Area
Creators: name: Gupta, Nayantara
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The number of neutrino induced upward going muons from a single Gamma Ray Burst (GRB) expected to be detected by the proposed kilometer scale IceCube detector at the South Pole location has been calculated. The effects of the Lorentz factor, total energy of the GRB emitted in neutrinos and its distance from the observer (red shift) on the number of neutrino events from the GRB have been examined. The present investigation reveals that there is possibility of exploring the early Universe with the proposed kilometer scale IceCube neutrino telescope.
description: 18pages, 5 figures. Physical Review D in press
RESULTS FROM THE 2015 MALAWI AGRICULTURE AND FOOD SECURITY POLICY PROCESSES BASELINE SURVEY
Creators: name: Benson, Todd
name: Nankhuni, Flora
name: Mabiso, Athur
name: Maredia, Mywish
name: Benson, Todd
name: Nankhuni, Flora
name: Mabiso, Athur
name: Maredia, Mywish
Publisher: name: Unknown
Year: 2016
Subjects: Agricultural and Food Policy

description: Over the past ten years, there have been several initiatives in Malawi to strengthen the processes through which the design and content of policies, strategies, and programs in the agriculture sector that affect the nation’s food security are established. Broadly linked to the operationalization in Malawi of the Comprehensive Africa Agriculture Development Programme (CAADP) of the African Union, the government of Malawi led a multi-stakeholder effort to develop the Agriculture Sector Wide Approach (ASWAp) for the period 2011 to 2015. This serves as the CAADP agricultural sector investment plan for the country. The implementation of the ASWAp is guided technically by multi-stakeholder Technical Working Groups (TWG), of which there are seven. The TWGs report to a higher-level Agricultural Sector Working Group (ASWG), whose membership is drawn from across the full range of stakeholders in Malawi’s agriculture sector. The ASWG has onward links to the political leadership of Malawi. A key component of the implementation of ASWAp is a mutual accountability framework for monitoring and evaluating progress made. The regular meetings of the TWGs and the ASWG are components of this, while an annual agricultural Joint Sector Review (JSR) report provides a formal accounting of progress achieved and challenges that remain.
Enneapterygius hsiojenae Shen and Wu 1994
Creators: name: Ho, Hsuan-Ching
name: Shao, Kwang-Tsao
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Perciformes
Tripterygiidae
Enneapterygius
Enneapterygius hsiojenae

description: 247. Enneapterygius hsiojenae Shen and Wu, 1994:11, fig. 7
Holotype: NTUM 07828 (29.3), Wen–tz–ken, 21 May 1991.
Paratype: NTUM 02829 (1, 25.9), same as holotype; NTUM 07826 (1, 29.5), Wen–tz–ken, 18 Jul. 1990; NTUM 07827 (1, 28.0), Ba–do–tz, 7 Mar. 1991; NTUM 07849 (1, 27.3), Ba–do–tz, 7 Mar. 1991; USNM 329660 (formly NTUM 7850, 1, 29.5), Ba–do–tz, 7 Mar. 1991.
 Remark. This species was synonymized with Enneapterygius vexillarius Fowler by Fricke (1997). Chiang and Chen (2008) resurrected it as a valid species.
description: Published as part of Ho, Hsuan-Ching & Shao, Kwang-Tsao, 2011, 2957, pp. 1-74 in Zootaxa 2957 on page 52
Extending SAXS instrument ranges through addition of a portable, inexpensive USAXS module
Creators: name: Pauw, Brian R.
name: Smith, Andrew J.
name: Snow, Tim
name: Shebanova, Olga
name: Sutter, John P.
name: Ilavsky, Jan
name: Hermida-Merino, Daniel
name: Smales, Glen J.
name: Terrill, Nicholas J.
name: Thünemann, Andreas F.
name: Bras, Wim
Publisher: name: arXiv
Year: 2019
Subjects: subject: Instrumentation and Detectors (physics.ins-det)
subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Ultra-SAXS can enhance the capabilities of existing SAXS/WAXS beamlines and laboratory instruments. A compact Ultra-SAXS module has been developed, which extends the measurable $q$-range with $0.0015 \leq q\mathrm{(nm^{-1})} \leq 0.2$, allowing structural dimensions between $30 \leq D$(nm)$ \leq 4000$ to be probed in addition to the range covered by a high-end SAXS/WAXS instrument. By shifting the module components in and out on their respective motor stages, SAXS/WAXS measurements can be easily and rapidly interleaved with USAXS measurements. In this paper, the design considerations, realization and synchrotron findings are presented. Measurements of silica spheres, an alumina membrane, and a porous carbon catalyst are provided as application examples.
The Effects of Kenya’s ‘Smarter’ Input Subsidy Program on Smallholder Behavior and Incomes: Do Different Quasi-Experimental Approaches Lead to the Same Conclusions?
Creators: name: Mason, Nicole M.
name: Wineman, Ayala
name: Kirimi, Lilian
name: Mather, David
name: Mason, Nicole M.
name: Wineman, Ayala
name: Kirimi, Lilian
name: Mather, David
Publisher: name: Unknown
Year: 2016
Subjects: Agricultural and Food Policy

description: Kenya joined the ranks of sub-Saharan African (SSA) countries implementing targeted input subsidy programs (ISPs) for inorganic fertilizer and improved seed in 2007 with the establishment of the National Accelerated Agricultural Inputs Access Program (NAAIAP). While several features of NAAIAP were ‘smarter’ than other ISPs in the region, some aspects were less ‘smart’. However, the efficacy of this program, and the relationship between its design and effectiveness, have been little studied. This article uses nationwide survey data to estimate the effects of NAAIAP participation on Kenyan smallholders’ cropping patterns, incomes, and poverty status. Unlike most previous studies of ISPs, a range of panel data- and propensity score-based methods are used to estimate the effects of NAAIAP. The article then compares these estimated effects across estimators and to the effects of other ISPs in SSA, and discusses the likely links between differences in program designs and impacts. The results are robust to the choice of estimator and suggest that, despite substantial crowding out of commercial fertilizer demand, NAAIAP had sizable impacts on maize production and poverty severity. NAAIAP’s success in targeting resource-poor farmers and implementation through vouchers redeemable at private agro-dealer shops likely contributed to its more favorable impacts than those of ISPs in Malawi and Zambia.
GAN-based Matrix Factorization for Recommender Systems
Creators: name: Dervishaj, Ervin
name: Cremonesi, Paolo
Publisher: name: arXiv
Year: 2022
Subjects: subject: Information Retrieval (cs.IR)
subject: Machine Learning (cs.LG)
subject: FOS: Computer and information sciences

description: Proposed in 2014, Generative Adversarial Networks (GAN) initiated a fresh interest in generative modelling. They immediately achieved state-of-the-art in image synthesis, image-to-image translation, text-to-image generation, image inpainting and have been used in sciences ranging from medicine to high-energy particle physics. Despite their popularity and ability to learn arbitrary distributions, GAN have not been widely applied in recommender systems (RS). Moreover, only few of the techniques that have introduced GAN in RS have employed them directly as a collaborative filtering (CF) model. In this work we propose a new GAN-based approach that learns user and item latent factors in a matrix factorization setting for the generic top-N recommendation problem. Following the vector-wise GAN training approach for RS introduced by CFGAN, we identify 2 unique issues when utilizing GAN for CF. We propose solutions for both of them by using an autoencoder as discriminator and incorporating an additional loss function for the generator. We evaluate our model, GANMF, through well-known datasets in the RS community and show improvements over traditional CF approaches and GAN-based models. Through an ablation study on the components of GANMF we aim to understand the effects of our architectural choices. Finally, we provide a qualitative evaluation of the matrix factorization performance of GANMF.
description: Accepted at the 37th ACM/SIGAPP Symposium on Applied Computing (SAC '22)
MOESM3 of CircPTK2 (hsa_circ_0005273) as a novel therapeutic target for metastatic colorectal cancer
Creators: name: Yang, Hongbao
name: Li, Xiaobo
name: Meng, Qingtao
name: Sun, Hao
name: Wu, Shenshen
name: Hu, Weiwei
name: Liu, Guilai
name: Li, Xianjing
name: Yang, Yong
name: Chen, Rui
Publisher: name: figshare
Year: 2020
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: Pharmacology
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Cancer
subject: Hematology

description: Additional file 3: Figure S3. CircPTK2 promoted tumor growth in a xenograft mouse model. LOVO cells stably expressing luciferase were transfected with the indicated siRNAs and HCT15 cells stably expressing luciferase were transfected with the indicated overexpressing-plasmid. After 72 h, cells were injected into the tail veins of nude mice (n = 6). (A) Representative bioluminescence images of mice bearing LOVO cells were obtained. (B) Luciferase activity of tumor, liver, and lung was quantified in mice bearing LOVO cells. (C) Representative bioluminescence images of mice bearing HCT15 cells were obtained. (D) Luciferase activity of tumor, liver and lung was quantified in mice bearing HCT15 cells. The data are the mean ± SEM. *P<0.05, **P<0.01, ***P<0.001. P values were calculated by one-way ANOVA.
Submillimeter Studies of Prestellar Cores and Protostars: Probing the Initial Conditions for Protostellar Collapse
Creators: name: Andre, Philippe
name: Bouwman, Jeroen
name: Belloche, Arnaud
name: Hennebelle, Patrick
Publisher: name: arXiv
Year: 2002
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: Improving our understanding of the initial conditions and earliest stages of protostellar collapse is crucial to gain insight into the origin of stellar masses, multiple systems, and protoplanetary disks. Observationally, there are two complementary approaches to this problem: (1) studying the structure and kinematics of prestellar cores observed prior to protostar formation, and (2) studying the structure of young (e.g. Class 0) accreting protostars observed soon after point mass formation. We discuss recent advances made in this area thanks to (sub)millimeter mapping observations with large single-dish telescopes and interferometers. In particular, we argue that the beginning of protostellar collapse is much more violent in cluster-forming clouds than in regions of distributed star formation. Major breakthroughs are expected in this field from future large submillimeter instruments such as Herschel and ALMA.
description: 12 pages, 9 figures, to appear in the proceedings of the conference "Chemistry as a Diagnostic of Star Formation" (C.L. Curry & M. Fich eds.)
Continuous microwave hole burning and population oscillations in a diamond spin ensemble
Creators: name: El-Ella, Haitham A. R.
name: Huck, Alexander
name: Andersen, Ulrik L.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Continuous spectral hole burning and spin-level population oscillations are studied in an inhomogeneously broadened diamond-based spin ensemble composed of substitutional nitrogen and nitrogen-vacancy centres created through neutron irradiation and annealing. The burnt spectral features highlight a detuning-dependent homogeneous hole linewidth that is up to three orders of magnitude narrower than the total inhomogeneous ensemble linewidth. Continuous population oscillations are observed to quickly decay beyond a pump and probe detuning of 5 Hz, and are numerically modelled using a five-level system of coupled rate equations. Fourier analysis of these oscillations highlight discrete $^{13}$C hyperfine interactions, with energies within the inhomogeneous ensemble linewidth, as well as suspected nuclear $3/2$-spin coupled signatures likely related to the $^7$Li byproduct of neutron irradiation.
description: 10 pages, 8 figures
Enneapterygius leucopunctatus Shen and Wu 1994
Creators: name: Ho, Hsuan-Ching
name: Shao, Kwang-Tsao
Publisher: name: Zenodo
Year: 2011
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Actinopterygii
Perciformes
Tripterygiidae
Enneapterygius
Enneapterygius leucopunctatus

description: 248. Enneapterygius leucopunctatus Shen and Wu, 1994:12, fig. 8
Holotype: NTUM 07823 (32.3), Wen–tz–keng, 21 mar. 1991.
Paratype: NTUM 7851 (1, 29.0), same as holotype; NTUM 07852 (1, 32.3), same as holotype.
 Remark. This species was synonymized with Enneapterygius vexillarius by Fricke (1997). However, Chiang and Chen (2008) resurrected it as a valid species.
description: Published as part of Ho, Hsuan-Ching & Shao, Kwang-Tsao, 2011, 2957, pp. 1-74 in Zootaxa 2957 on page 52