cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Marginal and Conditional Multiple Inference for Linear Mixed Model Predictors
Creators: name: Kramlinger, Peter
name: Krivobokova, Tatyana
name: Sperlich, Stefan
Publisher: name: Taylor & Francis
Year: 2022
Subjects: subject: Biophysics
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: In spite of its high practical relevance, cluster specific multiple inference for linear mixed model predictors has hardly been addressed so far. While marginal inference for population parameters is well understood, conditional inference for the cluster specific predictors is more intricate. This work introduces a general framework for multiple inference in linear mixed models for cluster specific predictors. Consistent confidence sets for multiple inference are constructed under both, the marginal and the conditional law. Furthermore, it is shown that, remarkably, corresponding multiple marginal confidence sets are also asymptotically valid for conditional inference. Those lend themselves for testing linear hypotheses using standard quantiles without the need of resampling techniques. All findings are validated in simulations and illustrated along a study on Covid-19 mortality in the U.S. state prisons. Supplementary materials for this article are available online.
title: ADCO, Troisième cartulaire de Saint-Étienne de Dijon (XVIe), Cart. 23 (G 127), 310 folios, f. 00015
Creators: name: de la Côte d'Or, Archives départementales
name: Petot, Frédéric
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2011
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: Laboratoire de Médiévistique Occidentale de Paris
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge
subject: cartulaire
subject: LaMOP

description: Troisième cartulaire de Saint-Étienne de Dijon (XVIe), Archives départementales de la Côte-d'Or, Cart. 23 (G 127), 310 folios, f. 00015, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Troisième cartulaire de Saint-Étienne de Dijon (XVIe), Archives départementales de la Côte-d'Or, Cart. 23 (G 127), 310 folios, f. 00015, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https://manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
Additional file 1: Table S1. of Early commitment of cardiovascular autonomic modulation in Brazilian patients with congenital generalized lipodystrophy
Creators: name: Ponte, Clarisse
name: Fernandes, Virgínia
name: Gurgel, Maria
name: Vasconcelos, Izabella Tamira
name: Karbage, Lia Beatriz
name: Liberato, Christiane
name: Negrato, Carlos
name: Gomes, Marília
name: Montenegro, Ana
name: Júnior, Renan Montenegro
Publisher: name: figshare
Year: 2018
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Molecular results of the AGPAT2 and BSCL2 genes in patients with generalized congenital lipodystrophy. Table S2. Results of the cardiovascular autonomic tests of patients with congenital generalized lipodystrophy. Table S3. Symptoms of dysautonomia in patients with congenital generalized lipodistrophy and type 1 diabetes as well as healthy individuals. Table S4. Evaluation of the cardiometabolic parameters and cardiovascular autonomic tests in patients with lipodystrophy and type 1 diabetes. (DOCX 36 kb)
Graded Steinberg algebras and their representations
Creators: name: Ara, Pere
name: Hazrat, Roozbeh
name: Li, Huanhuan
name: Sims, Aidan
Publisher: name: arXiv
Year: 2017
Subjects: subject: K-Theory and Homology (math.KT)
subject: Rings and Algebras (math.RA)
subject: FOS: Mathematics
subject: 22A22, 18B40, 16G30

description: We study the category of left unital graded modules over the Steinberg algebra of a graded ample Hausdorff groupoid. In the first part of the paper, we show that this category is isomorphic to the category of unital left modules over the Steinberg algebra of the skew-product groupoid arising from the grading. To do this, we show that the Steinberg algebra of the skew product is graded isomorphic to a natural generalisation of the the Cohen-Montgomery smash product of the Steinberg algebra of the underlying groupoid with the grading group. In the second part of the paper, we study the minimal (that is, irreducible) representations in the category of graded modules of a Steinberg algebra, and establish a connection between the annihilator ideals of these minimal representations, and effectiveness of the groupoid. Specialising our results, we produce a representation of the monoid of graded finitely generated projective modules over a Leavitt path algebra. We deduce that the lattice of order-ideals in the $K_0$-group of the Leavitt path algebra is isomorphic to the lattice of graded ideals of the algebra. We also investigate the graded monoid for Kumjian--Pask algebras of row-finite $k$-graphs with no sources. We prove that these algebras are graded von Neumann regular rings, and record some structural consequences of this.
description: 28 pages
Additional file 2: Table S1. of Strongyloides stercoralis and hookworm co-infection: spatial distribution and determinants in Preah Vihear Province, Cambodia
Creators: name: Forrer, Armelle
name: Virak Khieu
name: Schär, Fabian
name: Vounatsou, Penelope
name: Chammartin, Frédérique
name: Marti, Hanspeter
name: Sinuon Muth
name: Odermatt, Peter
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Results of the variable selection using bivariate multinomial regressions. Data were obtained from a cross-sectional survey conducted in 2010 in 60 villages of Preah Vihear Province, North Cambodia, among 2502 participants aged 2 years and above. (DOCX 26 kb)
Understanding Implicit Regularization in Over-Parameterized Single Index Model
Creators: name: Fan, Jianqing
name: Yang, Zhuoran
name: Yu, Mengxin
Publisher: name: Taylor & Francis
Year: 2022
Subjects: subject: Biotechnology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: In this article, we leverage over-parameterization to design regularization-free algorithms for the high-dimensional single index model and provide theoretical guarantees for the induced implicit regularization phenomenon. Specifically, we study both vector and matrix single index models where the link function is nonlinear and unknown, the signal parameter is either a sparse vector or a low-rank symmetric matrix, and the response variable can be heavy-tailed. To gain a better understanding of the role played by implicit regularization without excess technicality, we assume that the distribution of the covariates is known a priori. For both the vector and matrix settings, we construct an over-parameterized least-squares loss function by employing the score function transform and a robust truncation step designed specifically for heavy-tailed data. We propose to estimate the true parameter by applying regularization-free gradient descent to the loss function. When the initialization is close to the origin and the stepsize is sufficiently small, we prove that the obtained solution achieves minimax optimal statistical rates of convergence in both the vector and matrix cases. In addition, our experimental results support our theoretical findings and also demonstrate that our methods empirically outperform classical methods with explicit regularization in terms of both l2-statistical rate and variable selection consistency. Supplementary materials for this article are available online.
Additional file 2: of Prevalence and incidence of major depressive disorders among people living with HIV residing in Africa: a systematic review and meta-analysis protocol
Creators: name: Bigna, Jean
name: Um, Lewis
name: Asangbeh, Serra
name: Sibetcheu, Aurelie
name: KazĂŠ, Arnaud
name: Jobert Nansseu
Publisher: name: figshare
Year: 2018
Subjects: subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Search strategy in PubMed. (DOCX 17Â kb)
Additional file 2: Figure S2. of Effect of total number of harvested lymph nodes on survival outcomes after curative resection for gastric adenocarcinoma: findings from an eastern high-volume gastric cancer center
Creators: name: Macalindong, Shiela
name: Kim, Kwang
name: Nam, Byung-Ho
name: Ryu, Keun
name: Kubo, Norihito
name: Kim, Ja
name: Eom, Bang
name: Yoon, Hong
name: Myeong-Cherl Kook
name: Choi, Il
name: Kim, Young
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Developmental Biology
subject: Cancer

description: Kaplan-Meier overall survival curves according to total number of lymph nodes examined (â ¤ 30, 31-45, >45) for all patients and for each stage subgroup. (A) All patients; (B) stage IA; (C) stage IB; (D) stage IIA; (E) stage IIB; (F) stage IIIA; (G) stage IIIB; (H) stage IIIC. (DOCX 698 kb)
title: ADCO, Cinquième cartulaire de Saint-Étienne de Dijon (1664), Cart. 28 (G 132), 258 folios, f. 00364
Creators: name: de la Côte d'Or, Archives départementales
name: Archives Départementales De La Côte-D'Or
name: Petot, Frédérique
name: Projet CBMA
name: CG21/F.PETOT/2012
name: Petot, Frédéric
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020
Subjects: subject: LaMOP
subject: Laboratoire de Médiévistique Occidentale de Paris
subject: cartulaire
subject: Corpus Burgundiae Medii Aevi
subject: Chartes de la Bourgogne du Moyen Âge

description: Cinquième cartulaire de Saint-Étienne de Dijon (1664), Archives départementales de la Côte-d'Or, Cart. 28 (G 132), 258 folios, f. 00364, Numérisation en mode image.
description: Relation: http://www.cbma-project.eu/
description: Bibliographic citation: Cinquième cartulaire de Saint-Étienne de Dijon (1664), Archives départementales de la Côte-d'Or, Cart. 28 (G 132), 258 folios, f. 00364, in Projet CBMA - Corpus Burgundiae Medii Aevi [Ressource en ligne], https://manuscrits.cbma-project.eu/
description: Provenance: abbaye Saint-Étienne de Dijon
description: Provenance: http://www.wikidata.org/entity/Q15945019
title: Electromagnetic Observables and Open-Shell Nuclei from the In-Medium No-Core Shell Model
Creators: name: Vobig, Klaus
Publisher: name: UNSPECIFIED
Year: 2020

description: We present extensions and new developments of the in-medium no-core shell model (IM-NCSM), which is a novel ab initio many-method that merges the multi-reference in-medium similarity renormalization group (MR-IM-SRG) with the no-core shell model (NCSM)---two complementary and successful ab initio many-body methods. Within the IM-NCSM framework, the MR-IM-SRG employs a correlated NCSM reference state and unitarily transforms observables such that the reference state is decoupled. Consequently, the model-space convergence of a subsequent NCSM calculation is substantially accelerated---demonstrating the power of the IM-SRG decoupling scheme---and the IM-NCSM can treat nuclei that are out of reach for traditional NCSM calculations. In earlier applications we already employed the IM-NCSM for addressing scalar observables w.r.t. ground and excited states in even open-shell nuclei, however, this initial formulation of the IM-NCSM had several restrictions that we eliminate in this work. Due to the spherical formulation of the IM-SRG equations---which is mandatory from a computational point of view---the total angular momentum of the reference state is required to vanish and, thus, the IM-NCSM was restricted to the treatment of even nuclei. The particle-attached/particle-removed extension overcomes this restriction and makes odd nuclei accessible. Furthermore, the spherical formulation of the IM-SRG equations did not account for non-scalar operators and, therefore, the consistent transformation of electromagnetic observables was not possible. By deriving and implementing the IM-SRG equations corresponding to non-scalar observables, we open up the possibility to calculate electromagnetic observables from the IM-NCSM. These observables are sensitive to different aspects of the wave functions and, therefore, ideal for validating theoretical models and new opportunities for fruitful collaborations with experimentalists are opened up. For the transformation of observables we implemented a Magnus-type transformation, which determines the generator for the IM-SRG transformation and greatly reduces the computational effort. Considering numerical applications, we employ the IM-NCSM for the calculation of ground-state energies, excitation energies, radii, magnetic dipole moments, electric quadrupole moments, B(M1) transitions, and B(E2) transitions, where we study various medium-mass nuclei up to calcium isotopes. These calculations are already converged at very small model-space sizes---showing the great advantage of the IM-NCSM---and the results are compatible with large-scale NCSM calculations. These applications demonstrate that the IM-NCSM is now capable of addressing the full range of nuclear structure observables---including spectroscopic and electromagnetic observables---in fully open-shell nuclei.
Additional file 1: of Strongyloides stercoralis and hookworm co-infection: spatial distribution and determinants in Preah Vihear Province, Cambodia
Creators: name: Forrer, Armelle
name: Virak Khieu
name: SchĂ¤R, Fabian
name: Vounatsou, Penelope
name: FrĂŠdĂŠrique Chammartin
name: Marti, Hanspeter
name: Sinuon Muth
name: Odermatt, Peter
Publisher: name: figshare
Year: 2018
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Formulation of the multinomial model. (DOCX 49 kb)
Studying Academic Indicators within Virtual Learning Environment Using Educational Data Mining
Creators: name: Aldikanji, Eid
name: Ajami, Khalil
Publisher: name: arXiv
Year: 2016
Subjects: subject: Databases (cs.DB)
subject: Computers and Society (cs.CY)
subject: FOS: Computer and information sciences
subject: H.2.8

description: Our main goal is to discover the main factors influencing students' academic trajectory and students' academic evolution within such environment. Our results indicate strong correlation in this virtual learning environment between student average and some factors like: student's English level (despite the fact that Arabic language is the teaching language), student's age, student's gender, student's over-stay and student's place of residence (inside or outside Syria). Our results indicate also a need to modify the academic trajectory of students by changing the prerequisites of few courses delivered as a part of BIT diploma like Advanced DBA II, Data Security. In this research, the results also highlight the effect of the Syrian Crisis on students. Finally, we've suggested some future recommendations based on our observations and results to develop the current information system in SVU in order to help us to deduce some indicators more easily.
Lettre de Jérémie Jacques Oberlin à Jean-François Séguier, 1776-10-31
Creators: name: Oberlin, Jérémie Jacques
name: Oberlin, Jérémie Jacques
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2021
Subjects: Bibliographie

description: [transcription] [Oberlin] Strasbourg ce 31 octobre 1776

Voici enfin, Monsieur, qu'il se présente une occasion favorable pour vous remercier de toutes les bontés, dont vous m'avez comblé et pour vous faire parvenir et le paquet de Monsieur Less et les extraits des Acta Theod. Palatina que vous m'aviez demandés. Je n'ai pas pas pu en faire autant à l'égard du livre de Dankers, parcequ'il ne se trouve pas ici. J'ai donné commission pour les livres que vous désirez acheter. Si je les trouve, ce sera pour la première occasion que je saisirai. Je me souviendrai toute ma vie du plaisir que j'eus à vous embrasser. Je vous souhaite bonne santé et tout le loisir possible pour pouvoir achever le bel ouvrage que j'attends avec toutes les connaissances avec impatience. Mais ne différez pas, je vous prie, de faire le commencement de l'impression. Daignez vous persuader, Monsieur, que je n'ai rien tant à coeur que de vous prouver par les petits services qui dépendent de moi, combien je me fais gloire d'être avec le plus respectueux attachement, Monsieur,

V.T.H et T.O.S

Oberlin

Je vous prie de faire passer l'incluse

A Monsieur Calvet et de présenter mes devoirs

A Monsieur André de même qu'à Monsieur Bousquet.
description: [personnes citées] (Manheim) Académie palatine, David André, Esprit-Claude-François Calvet, Gottfried Less, M. (Nîmes) Bousquet
description: [reférence bibliographique citée] Acta Academiae Theodoro-Palatinae ou Historia et commentationes academiae electoralis scientiarum et elegantiorum literarum Theodoro-Palatinae, 1766-1794.
. Dankerts, Hendrik, Affbeeldinge van der ouer oude rarieteyten aen de strants ontrent Domburch in der eylanden van Walcheren by Dyckgraef en de geswoorens van de vyff ambachten op het opne
description: Source: [lieu de Conservation] Nîmes, Bibliothèque Carré d'Art [cote]ms. 146_1, fol. 4
description: Source: ark:/12148/btv1b10015282n
The French Early Breast Cancer Cohort (FRESH): a resource for breast cancer research and evaluations of oncology practices based on the French National Healthcare System Database (SNDS) : supplemental
Creators: name: Anne-Sophie Hamy
Publisher: name: Zenodo
Year: 2022

description: Because of an important disparity of care pathways and quality of care among women diagnosed with an early-stage breast cancer, we aimed to create a unique cohort of patients including all French women aged 18 years or over, treated by surgery and registered in the general health insurance coverage plan. After aggregating and annotating medicoadministrative data on 235,368 early breast cancer patients, we open up perspectives for researches on adverse effects, morbidity, mortality, the monitoring of care consumption or medical-economic studies. We describe data sources, inclusion and exclusion criteria, basic descriptive analyses, and longitudinal trends over time.
Defining relations for the orbit type strata of SU(2)-lattice gauge models
Creators: name: Fuerstenberg, Florian
name: Rudolph, Gerd
name: Schmidt, Matthias
Publisher: name: arXiv
Year: 2017
Subjects: subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: We consider an SU(2)-lattice gauge model in the tree gauge. Classically, this is a system with symmetries whose configuration space is a direct product of copies of SU(2), acted upon by diagonal inner automorphisms. We derive defining relations for the orbit type strata in the reduced classical phase space. The latter is realized as a certain quotient of a direct product of copies of the complexified group SL(2,\CC) (sometimes named the GIT-quotient because it provides a categorical quotient in the sense of geometric invariant theory). The relations derived can be used for the construction of the orbit type costratification of the Hilbert space of the quantum system in the sense of Huebschmann.
description: 28 pages
Charge exchange in the ultraviolet: implication for interacting clouds in the core of NGC 1275
Creators: name: Gu, Liyi
name: Mao, Junjie
name: O'Dea, Christopher P.
name: Baum, Stefi A.
name: Mehdipour, Missagh
name: Kaastra, Jelle S.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: Atomic Physics (physics.atom-ph)
subject: FOS: Physical sciences

description: Charge exchange emission is known to provide a key diagnostic to the interface between hot and cold matter in many astrophysical environments. Most of the recent charge exchange studies focus on its emission in the X-ray band, but few on the UV part, although the latter can also provide a powerful probe of the charge exchange process. An atomic calculation, as well as an application to observed data, are presented to explore and describe the potential use of the UV data for the study of cosmic charge exchange. Using the newest charge exchange model in the SPEX code v3.03, we re-analyze an archival Hubble STIS data of the central region of NGC 1275. The NGC 1275 spectrum shows hints for three possible weak lines at about 1223.6~Å, 1242.4~Å, and 1244.0~Å, each with a significance of about $2-3σ$. The putative features are best explained by charge exchange between highly ionized hydrogen, neon, and sulfur with neutral matter. The wavelengths of the charge exchange lines are found robustly with uncertainties $\leq 0.3$~Å. The possible charge exchange emission shows a line-of-sight velocity offset of about $-3400$ km s$^{-1}$ with respect to the NGC 1275 nucleus, which resembles one of the Ly$α$ absorbers reported in Baum et al. (2005). This indicates that the charge exchange lines might be emitted as the same position of the absorber, which could be ascribed to outflowing gas from the nucleus.
description: accepted for publication in A&A
Additional file 1: of Prevalence and incidence of major depressive disorders among people living with HIV residing in Africa: a systematic review and meta-analysis protocol
Creators: name: Bigna, Jean
name: Um, Lewis
name: Asangbeh, Serra
name: Sibetcheu, Aurelie
name: KazĂŠ, Arnaud
name: Jobert Nansseu
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 110309 Infectious Diseases

description: Preferred Reporting Items for Systematic review and Meta-Analysis Protocols Checklist. (DOC 88Â kb)
The Central Engine and Outflows in the Nuclear Starburst of NGC 253
Creators: name: Bolatto, Alberto
Publisher: name: Zenodo
Year: 2020

description: Starbursts are a rare phenomenon in the present day universe, but they represent perhaps the most common mode under which stars form and galaxies grow during the z~1-2 peak of cosmic star formation activity. Feedback, in the form of galaxy-scale outflows, is thought to be one of the main forms of regulation of galaxy growth. NGC 253 is the premier local example for a nuclear starburst, and has been targeted with several ALMA observations in order to study how these processes work. I will discuss the properties of the molecular outflow, including our best constraints on the mass and outflow rate, and the properties of the outflowing molecular gas. I will also present the results of our recent 1.7-pc resolution observations, including the detection and properties of 14 compact structures with properties corresponding to massive young star clusters and super star clusters, 13 of which are so embedded that are invisible in optical and NIR observations (the 14th is a known SSC). I will also discuss the evidence for feedback and disruption on the scales of these clusters. Finally, I will present a preliminary analysis of the 0.5-pc resolution observations recently obtained.
Constructing separable states in infinite-dimensional systems by operator matrices
Creators: name: Hou, Jinchuan
name: Chai, Jinfei
Publisher: name: arXiv
Year: 2016
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We introduce a class of states so-called semi-SSPPT (semi super strong positive partial transposition) states in infinite-dimensional bipartite systems by the Cholesky decomposition in terms of operator matrices and show that every semi-SSPPT state is separable. This gives a method of constructing separable states and generalizes the corresponding results in [Phys. Rev. A \textbf{77}, 022113(2008), J. Phys. A: Math. Theor. 45 505303 (2012)]. This criterion is specially convenient to be applied when one of the subsystem is a qubit system.
description: 12 pages
The molecular gas content of obscured Quasars at high-z
Creators: name: Brusa, Marcella
Publisher: name: Zenodo
Year: 2020

description: The standard merger-driven galaxy evolutionary scenario predicts a phase of deeply “buried” supermassive black hole growth coexisting with a starburst before feedback phenomena deplete the cold molecular gas reservoir of the galaxy and an optically luminous quasar (QSO) is revealed. We present measurements of the cold gas reservoir of a small sample of obscured and highly obscured QSOs at z>1, including well studied objects such as XID2028 and GMASS953 for which the gas mass has been derived through CO SLED modelling. We compare the molecular gas conditions of our targets with those of other systems at z > 1, considering normal and SMGs, unobscured and obscured QSOs from the literature. From the comparison with literature data, we found that, on average, obscured QSOs are associated with high SFE and low gas fraction with respect to normal star forming galaxies and SMGs. We found comparable gas fractions associated with mildly and highly obscured active galaxies. Moreover, the SFE of CT and obscured systems are similar to those of unobscured quasars. These results could be in tension with the galaxy evolution scenario or, alternatively, might suggest that feedback effects are critical from the early phases of galaxy evolution.
Scaling relations and interstellar dust mass budget in galaxies
Creators: name: Calura, Francesco
Publisher: name: Zenodo
Year: 2020

description: Interstellar dust influences the spectral properties of galaxies across a wide wavelength range (from the UV to the FIR), as well as their chemical abundance pattern, as it contains large fractions of heavy elements. Dust can be produced by means of various processes, i. e. directly in cold stellar ejecta, it can grow in the interstellar medium and it can be destroyed by astration and interstellar shocks. In this contribution, I will show how chemical evolution models of galaxies which include dust production can be a useful tool to study the redshift evolution of a few basic galactic scaling relations. In particular, the analysis of the dust-to-stellar mass ratio of galaxies of different masses allows us to derive important constraints on some of their most fundamental parameters, including the stellar initial mass function. I will also present a new, direct assessment of the evolution of the cosmic dust mass budget up to high redshift.
Additional file 1: Table S1. of A large-scale study of a poultry trading network in Bangladesh: implications for control and surveillance of avian influenza viruses
Creators: name: N. Moyen
name: G. Ahmed
name: S. Gupta
name: T. Tenzin
name: R. Khan
name: T. Khan
name: N. Debnath
name: M. Yamage
name: D.U. Pfeiffer
name: G. Fournie
Publisher: name: figshare
Year: 2018
Subjects: subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Science Policy

description: Total number of poultry that interviewed traders reported trading in the week prior to the interviews. As the proportion of traders interviewed per surveyed LBM is unknown the actual number of poultry traded weekly at each LBM could not be estimated. (DOCX 12Â kb)
MOESM1 of Putative biomarkers for predicting tumor sample purity based on gene expression data
Creators: name: Li, Yuanyuan
name: Umbach, David
name: Bingham, Adrienna
name: Li, Qi-Jing
name: Zhuang, Yuan
name: Li, Leping
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Environmental Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Plant Biology
subject: Computational Biology

description: Additional file 1: Figure S1. Box plots of tumor purity estimates by ABSOLUTE in original scale [0â€“1] for each tumor type.
Additional file 1: Figure S1. of Effect of total number of harvested lymph nodes on survival outcomes after curative resection for gastric adenocarcinoma: findings from an eastern high-volume gastric cancer center
Creators: name: Macalindong, Shiela
name: Kim, Kwang
name: Nam, Byung-Ho
name: Ryu, Keun
name: Kubo, Norihito
name: Kim, Ja
name: Eom, Bang
name: Yoon, Hong
name: Myeong-Cherl Kook
name: Choi, Il
name: Kim, Young
Publisher: name: figshare
Year: 2018
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Developmental Biology
subject: Cancer

description: Kaplan-Meier disease-free survival curves according to total number of lymph nodes examined (â ¤ 30, 31-45, >â 45) for all patients and for each stage subgroup. (A) All patients; (B) stage IA; (C) stage IB; (D) stage IIA; (E) stage IIB; (F) stage IIIA; (G) stage IIIB; (H) stage IIIC. (DOCX 327 kb)
Additional file 1 of Genomic risk prediction of coronary artery disease in women with breast cancer: a prospective cohort study
Creators: name: Liou, Lathan
name: Kaptoge, Stephen
name: Dennis, Joe
name: Shah, Mitul
name: Tyrer, Jonathan
name: Inouye, Michael
name: Easton, Douglas F.
name: Pharoah, Paul D. P.
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Mathematical Sciences not elsewhere classified
subject: Cancer

description: Additional file 1. Supplementary appendix containing additional description of methods and tables and figures for sensitivity analyses described in the main text.
MOESM1 of State-dependent domicile leaving rates in Anopheles gambiae
Creators: name: Zappia, Simon
name: Chubaty, Alex
name: Roitberg, Bernard
Publisher: name: figshare
Year: 2018
Subjects: subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences

description: Additional file 1. Evaluation of mosquito leaving rates based on starvation treatment and experiment end time using logistic regression.
Additional file 1: of Genomic reconstruction of σ54 regulons in Clostridiales
Creators: name: Nie, Xiaoqun
name: Dong, Wenyue
name: Yang, Chen
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: Environmental Sciences not elsewhere classified
subject: Chemical Sciences not elsewhere classified
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified

description: Table S1. List of Clostridiales species containing σ54 (SigL) and EBPs. Table S2. Identified EBPs in Clostridiales. Table S3. Reconstructed regulons of EBPs in Clostridiales. Table S4. Primers used in this study. (PDF 1577 kb)
title: Tegula (tuile) avec marque digitée (Inv. 2011.7.7884.1) – Oppidum de Bibracte
Creators: name: Bibracte
Publisher: name: Conservatoire National des Données 3D (CND3D)
Year: 2024
Subjects: subject: matériau de construction

description: À partir du milieu du Ier siècle avant notre ère  la pierre commence à remplacer de plus en plus fréquemment le bois dans l architecture. De grandes demeures aristocratiques  s étendant sur plusieurs centaines de mètres carrés et construites sur le modèle des domus de l Italie romaine  font leur apparition. Les fouilles menées depuis le XIXe siècle permettent de suivre l évolution des techniques de construction méditerranéennes qui se sont progressivement imposées. La toiture n échappe pas à cette tendance  où les traditionnels bardeaux  sorte de tuiles en bois  sont progressivement remplacés par des tegulae et des imbrex  à mesure que l architecture en bois cède la place à celle en pierre.
A time-driven activity-based costing approach of magnetic resonance-guided high-intensity focused ultrasound for cancer-induced bone pain
Creators: name: Galendi, Julia Simões Corrêa
name: Yeo, Sin Yuin
name: Simic, Dusan
name: Grüll, Holger
name: Stock, Stephanie
name: Müller, Dirk
Publisher: name: Taylor & Francis
Year: 2022
Subjects: subject: Medicine
subject: Cell Biology
subject: Biotechnology
subject: Ecology
subject: FOS: Biological sciences
subject: Science Policy
subject: Cancer
subject: Plant Biology

description: To determine resource consumption and total costs for providing magnetic resonance-guided high-intensity focused ultrasound (MR-HIFU) treatment to a patient with cancer-induced bone pain (CIBP). We conducted a time-driven activity-based costing (TD-ABC) of MR-HIFU treatments for CIBP from a hospital perspective. A European care-pathway (including a macro-, meso-, and micro-level) was designed to incorporate the care–delivery value chain. Time estimates were obtained from medical records and from prospective direct observations. To calculate the capacity cost rate, data from the controlling department of a German university hospital were allocated to the modules of the care pathway. Best- and worst-case scenarios were calculated by applying lower and upper bounds of time measurements. The macro-level care pathway consisted of eight modules (i.e., outpatient consultations, pretreatment imaging, preparation, optimization, sonication, post-treatment, recovery, and anesthesia). The total cost of an MR-HIFU treatment amounted to €5147 per patient. Best- and worst-case scenarios yielded a total cost of €4092 and to €5876. According to cost categories, costs due to equipment accounted for 41% of total costs, followed by costs with personnel (32%), overhead (16%) and materials (11%). MR-HIFU is an emerging noninvasive treatment for alleviating CIBP, with increasing evidence on treatment efficacy. This costing study can support MR-HIFU reimbursement negotiations and facilitate the adoption of MR-HIFU as first-line treatment for CIBP. The present TD-ABC model creates the opportunity of benchmarking the provision of MR-HIFU to bone tumor.Key pointsMagnetic resonance-guided high-intensity focused ultrasound (MR-HIFU) is an emerging noninvasive treatment modality for alleviating cancer-induced bone pain (CIBP).From a hospital perspective, the total cost of MR-HIFU amounted to €5147 per treatment.This time-driven activity-based costing model creates the opportunity of benchmarking the provision of MR-HIFU to bone tumor. Magnetic resonance-guided high-intensity focused ultrasound (MR-HIFU) is an emerging noninvasive treatment modality for alleviating cancer-induced bone pain (CIBP). From a hospital perspective, the total cost of MR-HIFU amounted to €5147 per treatment. This time-driven activity-based costing model creates the opportunity of benchmarking the provision of MR-HIFU to bone tumor.
Viv Visualization Library Use Cases
Creators: name: Manz, Trevor
name: Gold, Ilan
name: Patterson, Nathan Heath
name: McCallum, Chuck
name: Keller, Mark S
name: Herr II, Bruce W
name: Börner, Katy
name: Spraggins, Jeffery M
name: Gehlenborg, Nils
Publisher: name: figshare
Year: 2022
Subjects: subject: 80301 Bioinformatics Software
subject: FOS: Computer and information sciences
subject: 60102 Bioinformatics

description: The Viv library (https://github.com/hms-dbmi/viv) offers a flexible toolkit for creating a wide range of web-based bioimaging software on top of open standard OME-TIFF and OME-NGFF formats. We have embedded Viv into several visualization tools designed for specific tasks, demonstrating its modularity and reuse.
Hyperthermia promotes exosome secretion by regulating Rab7b while increasing drug sensitivity in adriamycin-resistant breast cancer
Creators: name: Xu, Di
name: Tang, Wen-Juan
name: Zhu, Yi-Zhi
name: Liu, Zhen
name: Yang, Kai
name: Liang, Ming-Xing
name: Chen, Xiu
name: Wu, Yang
name: Tang, Jin-Hai
name: Zhang, Wei
Publisher: name: Taylor & Francis
Year: 2022
Subjects: subject: Biochemistry
subject: Space Science
subject: Cell Biology
subject: Molecular Biology
subject: Pharmacology
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Hematology
subject: Plant Biology
subject: FOS: Biological sciences

description: To investigate the mechanism through which hyperthermia promotes exosome secretion and drug sensitivity in adriamycin-resistant breast cancer. We first evaluated the effect of hyperthermia on adriamycin-resistant breast cancer viability and used transmission electron microscopy, nanoparticle tracking analysis, and a bicinchoninic acid kit to validate the effect of hyperthermia on exosome secretion. The effective targeting molecules and pathways changed by hyperthermia were explored by RNA microarray and verified in vitro. The adriamycin-resistant MCF-7/ADR cells co-incubated with the exosomes produced by MCF-7/ADR cells after hyperthermia were assessed. The uptake of exosomes by MCF-7/ADR cells after hyperthermia treatment was evaluated by confocal microscopy. Finally, the mechanism through which hyperthermia promotes exosome secretion by hyperthermia was determined. Hyperthermia significantly suppressed the growth of adriamycin-resistant breast cancer cells and increased drug sensitivity by upregulating FOS and CREB5, genes related to longer overall survival in breast cancer patients. Moreover, hyperthermia promoted exosome secretion through Rab7b, a small GTPase that controls endosome transport. The upregulated FOS and CREB5 antioncogenes can be transferred to MCF-7/ADR cells by hyperthermia-treated MCF-7/ADR cell-secreted exosomes. Our results demonstrated a novel function of hyperthermia in promoting exosome secretion in adriamycin-resistant breast cancer cells and revealed the effects of hyperthermia on tumor cell biology. These hyperthermia-triggered exosomes can carry antitumor genes to the residual tumor and tumor microenvironment, which may be more beneficial to the effects of hyperthermia. These results represent an exploration of the relationship between therapeutic strategies and exosome biology.
MOESM7 of DeepMF: deciphering the latent patterns in omics profiles with a deep learning method
Creators: name: Chen, Lingxi
name: Xu, Jiao
name: Li, Shuai
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Chemical Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Mathematical Sciences not elsewhere classified
subject: Cancer
subject: Hematology

description: Additional file 7 Hierarchical clustering results for sample latent matrices. The top row is the ground truth subtype label for each patients. The rest rows represent patient subtype assigned by PCA, ICA, CoGAPS, NMF, DeepMF, respectively. A Medulloblastoma data set; B Leukemia data set; C TCGA BRCA data set; D SRBCT data set.
title: Tegula (tuile) avec marque digitée (Inv. 2011.7.7884.1)
Creators: name: Paris, Pascal
name: Martini, Chiara
Publisher: name: Conservatoire National des Données 3D (CND3D)
Year: 2024
Subjects: subject: matériau de construction
subject: Artefact
subject: ACQUISITION

description: Modèle 3D
Acute and long-term toxicity in patients undergoing induction chemotherapy followed by thermoradiotherapy for advanced cervical cancer
Creators: name: Gao, X. S.
name: Boere, I. A.
name: van Beekhuizen, H. J.
name: Franckena, M.
name: Nout, R.
name: Kruip, M. J. H. A.
name: Kulawska, M. D.
name: van Doorn, H. C.
Publisher: name: Taylor & Francis
Year: 2022
Subjects: subject: Medicine
subject: Immunology
subject: FOS: Clinical medicine
subject: Marine Biology
subject: Cancer

description: To determine rates of vascular toxicity, acute kidney injury (AKI), chronic kidney disease (CKD) and survival in high-risk cervical cancer patients treated with platinum-based induction chemotherapy followed by thermoradiotherapy. Between January 1999 and April 2017, patients with large primary tumors (>6cm) and/or para-aortic lymph node (LN) metastases >1 cm and/or para-iliac LN >2 cm were included. Patient and tumor characteristics, Common Toxicity Criteria v4.03 scores, laboratory tests and treatment data were retrieved from patient records. CT scans were reviewed for the presence of thrombo-embolic events (TEE). The study protocol was approved by the Medical Ethics Review Committee of Erasmus MC, Rotterdam (MEC2017-133). The 105 included patients had a mean age of 47.9 years (range 22–79) and a median follow-up time of 43 months (IQR 14–72). Median tumor size was 6.0 cm (range 2.6–11.5), 30% had a clinical FIGO stage ≥ IIIB and 42% had enlarged para-aortic LN. Cisplatin-based therapy was started in 86 patients (82%), of whom 30 (35%) switched to carboplatin and 47% of patients completed six cycles of platinum-based chemotherapy. All patients received external beam radiotherapy as planned, 98 patients (93%) underwent brachytherapy as planned or received an external boost, and 95 patients (90%) completed all five planned hyperthermia treatments. During cisplatin chemotherapy, 34 patients experienced AKI (39%). At last follow-up, 35% of patients had chronic renal toxicity (GFR 59 − 15/min/1.73 m2). At presentation, a TEE was present in 10 (10%) and another 23 (22%) patients experienced a TEE (18% venous, 4% arterial) during chemotherapy. Five-year overall survival was 58% (95% CI 47.8–68.6 SE 0.053). Achieving a five-year overall survival of 58%, platinum-based induction chemotherapy followed by thermoradiotherapy is an effective treatment for advanced-stage high-risk cervical cancer. However, treatment is accompanied by an unacceptably high prevalence of chemotherapy-associated TEE and acute kidney injury, as well as chronic kidney disease. Future studies should investigate the role of carboplatin in reducing toxicity and the effect of thromboprophylaxis in high-risk patients.
Immigrant Representations in Contemporary European Crime Ficrion
Creators: name: ANNA KARINA JAQUIERY
Publisher: name: Monash University
Year: 2019
Subjects: subject: 190402 Creative Writing (incl. Playwriting)
subject: FOS: Arts (arts, history of arts, performing arts, music)

description: The purpose of this thesis is to examine the particular and different ways in which immigrants are represented in contemporary European crime fiction. What do these representations look like? Do they tend to be reductive, stereotypical, or are they more complex, multi-dimensional? As Europe’s socio-political landscape changes and migrants become more visible, are we seeing a shift in how immigrants are represented in European crime novels ?
Radiomics analysis of ultrasound to predict recurrence of hepatocellular carcinoma after microwave ablation
Creators: name: Wu, Jia-peng
name: Ding, Wen-zhen
name: Wang, Yu-ling
name: Liu, Sisi
name: Zhang, Xiao-qian
name: Yang, Qi
name: Cai, Wen-jia
name: Yu, Xiao-ling
name: Liu, Fang-yi
name: Kong, Dexing
name: Zhong, Hui
name: Yu, Jie
name: Liang, Ping
Publisher: name: Taylor & Francis
Year: 2022
Subjects: Space Science
Medicine
Biotechnology
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified

description: To develop and validate an ultrasonic radiomics model for predicting the recurrence and differentiation of hepatocellular carcinoma (HCC). Convolutional neural network (CNN) ResNet 18 and Pyradiomics were used to analyze gray-scale-ultrasonic images to predict the prognosis and degree of differentiation of HCC. This retrospective study enrolled 513 patients with HCC who underwent preoperative grayscale-ultrasonic imaging, and their clinical characteristics were observed. Patients were randomly divided into training (n = 413) and validation (n = 100) cohorts. CNN ResNet 18 and Pyradiomics were used to analyze ultrasonic images of HCC and peritumoral images to develop a prognostic and differentiation model. Clinical characteristics were integrated into the radiomics model and patients were stratified into high- and low-risk groups. The predictive effect was evaluated using the C-index and receiver operating characteristic (ROC) curve. The model combined with ResNet 18 and clinical characteristics achieved a good predictive ability. The C-indices of early recurrence (ER), late recurrence (LR), and recurrence-free survival (RFS) were 0.695 (0.561–0.789), 0.715 (0.623–0.800) and 0.721 (0.647–0.795), respectively, in the validation cohort, which was superior to the clinical model and ultrasonic semantic model. The model could stratify patients into high- and low-risk groups, which showed significant differences (p < 0.001) in ER, LR, and RFS. The area under the curve for predicting the degree of HCC differentiation was 0.855 and 0.709 in the training and validation cohorts, respectively. We developed and validated a radiomics model to predict HCC recurrence and HCC differentiation, which could also acquire pathological information in a noninvasive manner.KEY RESULTSA hepatocellular carcinoma (HCC) prognostic prediction model was developed and validated by convolutional neural network (CNN) ResNet 18-based gray-scale ultrasound (US).A differentiation of HCC prediction model was developed for preoperative prediction avoiding invasive operation.Compared with Pyradiomics, CNN ResNet was more suitable for extracting information from US images. A hepatocellular carcinoma (HCC) prognostic prediction model was developed and validated by convolutional neural network (CNN) ResNet 18-based gray-scale ultrasound (US). A differentiation of HCC prediction model was developed for preoperative prediction avoiding invasive operation. Compared with Pyradiomics, CNN ResNet was more suitable for extracting information from US images.