cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
sj-pdf-1-vas-10.1177_1708538120950116 - Supplemental material for Comparison of paclitaxel-coated balloon angioplasty with femoropopliteal bypass surgery in treating femoropopliteal lesions
Creators: name: Kavala, Ali Aycan
name: Kuserli, Yusuf
name: Saygin Turkyilmaz
Publisher: name: SAGE Journals
Year: 2020
Subjects: Cardiology

description: Supplemental material, sj-pdf-1-vas-10.1177_1708538120950116 for Comparison of paclitaxel-coated balloon angioplasty with femoropopliteal bypass surgery in treating femoropopliteal lesions by Ali Aycan Kavala, Yusuf Kuserli and Saygin Turkyilmaz in Vascular
Supplementary document for Advantages of internal reference in holographic shaping ps supercontinuum pulses through multimode optical fibers - 7037884.pdf
Creators: name: Piscopo, Linda
name: Collard, Liam
name: Pisano, Filippo
name: Balena, Antonio
name: De Vittorio, Massimo
name: Pisanello, Ferruccio
Publisher: name: Optica Publishing Group
Year: 2024
Subjects: Optical Physics not elsewhere classified

description: Supplementary information
Supplementary document for Modeling and experimental characterization of two-wave mixing in Yb-doped fiber amplifiers - 7038533.pdf
Creators: name: Hauge, Jakob
name: Pedersen, Jens
name: Bondu, Magalie
name: Laegsgaard, Jesper
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: Detailed derivations of Eqs. (23), (24) and (26)
sj-pdf-1-tae-10.1177_2042018820950146 – Supplemental material for Use of a do-it-yourself artificial pancreas system is associated with better glucose management and higher quality of life among adults with type 1 diabetes
Creators: name: Wu, Zekai
name: Luo, Sihui
name: Zheng, Xueying
name: Bi, Yan
name: Xu, Wen
name: Yan, Jinhua
name: Yang, Daizhi
name: Weng, Jianping
Publisher: name: SAGE Journals
Year: 2020
Subjects: Endocrinology
Paediatrics
Pharmacology and Pharmaceutical Sciences not elsewhere classified

description: Supplemental material, sj-pdf-1-tae-10.1177_2042018820950146 for Use of a do-it-yourself artificial pancreas system is associated with better glucose management and higher quality of life among adults with type 1 diabetes by Zekai Wu, Sihui Luo, Xueying Zheng, Yan Bi, Wen Xu, Jinhua Yan, Daizhi Yang and Jianping Weng in Therapeutic Advances in Endocrinology and Metabolism
Discovery and visualisation of homologous genes and gene families using Galaxy
Creators: name: Thanki, Anil
name: Soranzo, Nicola
name: Haerty, Wilfried
name: Davey, Robert P
Publisher: name: F1000Research
Year: 2017

description: The phylogenetic information inferred from the study of homologous genes helps us to understand the evolution of gene families and plays a vital role in finding ancestral gene duplication events as well as identifying regions that are under positive selection within species.

The Ensembl GeneTrees pipeline generates gene trees based on coding sequences and provides details about exon conservation, and is used in the Ensembl Compara project to discover homologous gene families. Since expertise is required to configure and run the pipeline via the command-line, we created GeneSeqToFamily, an open-source Galaxy workflow based on Ensembl GeneTrees. GeneSeqToFamily helps users to run potentially large-scale gene family analyses without requiring the command-line while still allowing tool parameters, configurations, and the tools themselves to be modified.
Supplemental Material, TOP-20-0039_R3_Appendix - Information Type Influences Students’ Perceptions of Faculty Self-Disclosures
Creators: name: Hill, Katherine Grace
name: Martischewsky, Macy Jayne
name: Erickson, Cynthia Ann
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: Education
subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology
subject: 160807 Sociological Methodology and Research Methods
subject: FOS: Sociology

description: Supplemental Material, TOP-20-0039_R3_Appendix for Information Type Influences Students’ Perceptions of Faculty Self-Disclosures by Katherine Grace Hill, Macy Jayne Martischewsky and Cynthia Ann Erickson in Teaching of Psychology
Supplemental_Table_1 – Supplemental material for Patients With Opioid Use Disorder Have Increased Readmission Rates, Emergency Room Visits, and Costs Following a Hallux Valgus Procedure
Creators: name: Parrish, James M.
name: Rushabh M. Vakharia
name: Benson, Dillon C.
name: Hoyt, Aaron K.
name: Jenkins, Nathaniel W.
name: Kaplan, Jonathan R. M.
name: Rush, Augustus J.
name: Roche, Martin W.
name: Amiethab A. Aiyer
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 110314 Orthopaedics
subject: FOS: Clinical medicine
subject: 110604 Sports Medicine
subject: FOS: Health sciences
subject: 110323 Surgery

description: Supplemental material, Supplemental_Table_1 for Patients With Opioid Use Disorder Have Increased Readmission Rates, Emergency Room Visits, and Costs Following a Hallux Valgus Procedure by James M. Parrish, Rushabh M. Vakharia, Dillon C. Benson, Aaron K. Hoyt, Nathaniel W. Jenkins, Jonathan R. M. Kaplan, Augustus J. Rush, Martin W. Roche and Amiethab A. Aiyer in Foot & Ankle Specialist
Supplementary document for Method for determination of luminance of two-photon vision stimuli - 7038703.pdf
Creators: name: Kaczkos, Oliwia
name: Zielinska, Agnieszka
name: Pniewski, Jacek
name: Wojtkowski, Maciej
name: Komar, Katarzyna
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: supplemental doocument
Supplementary_Appendix – Supplemental material for Impact of tacrolimus versus cyclosporine on one-year renal transplant outcomes: A single-centre retrospective cohort study
Creators: name: Ong, Pei Wen
name: Kee, Terence
name: Ho, Quan Yao
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111708 Health and Community Services
subject: FOS: Health sciences
subject: Cardiology
subject: Medicine
subject: 111099 Nursing not elsewhere classified
subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: FOS: Clinical medicine
subject: 111799 Public Health and Health Services not elsewhere classified
subject: 110323 Surgery

description: Supplemental material, Supplementary_Appendix for Impact of tacrolimus versus cyclosporine on one-year renal transplant outcomes: A single-centre retrospective cohort study by Pei Wen Ong, Terence Kee and Quan Yao Ho in Proceedings of Singapore Healthcare
Supplementary document for Attosecond vortex pulse trains - 7038846.pdf
Creators: name: de las Heras, Alba
name: Schmidt, David
name: San Roman, Julio
name: Serrano, Javier
name: Adams, Daniel
name: Plaja, Luis
name: Durfee, Charles
name: Hernandez-Garcia, Carlos
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: Supplemental Document with further analysis supporting the main text.
Supplementary document for Attosecond vortex pulse trains - 7038846.pdf
Creators: name: de las Heras, Alba
name: Schmidt, David
name: San Roman, Julio
name: Serrano, Javier
name: Adams, Daniel
name: Plaja, Luis
name: Durfee, Charles
name: Hernandez-Garcia, Carlos
Publisher: name: Optica Publishing Group
Year: 2024
Subjects: Uncategorized

description: Supplemental Document with further analysis supporting the main text.
Race-visible_teacher_education_supplemental_file_FINAL.R2_1 – Supplemental material for Race-Visible Teacher Education: A Review of the Literature From 2002 to 2018
Creators: name: Hambacher, Elyse
name: Ginn, Katherine
Publisher: name: SAGE Journals
Year: 2020
Subjects: Education

description: Supplemental material, Race-visible_teacher_education_supplemental_file_FINAL.R2_1 for Race-Visible Teacher Education: A Review of the Literature From 2002 to 2018 by Elyse Hambacher and Katherine Ginn in Journal of Teacher Education
Supplementary document for Inverse design of mid-infrared diamond waveguide beam splitter - 7039061.pdf
Creators: name: Li, Yihao
name: Chen, Shu
name: Yu, Yanan
name: Li, Chen
name: Xiao, Tinghui
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: Supplement 1
Supplemental Material, sj-pdf-2-jcr-10.1177_0022002720957714 - Introducing Transnational Terrorist Hostage Event (TTHE) Data Set, 1978 to 2018
Creators: name: Wukki Kim
name: George, Justin
name: Sandler, Todd
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 220104 Human Rights and Justice Issues
subject: FOS: Philosophy, ethics and religion
subject: 160607 International Relations
subject: FOS: Political science

description: Supplemental Material, sj-pdf-2-jcr-10.1177_0022002720957714 for Introducing Transnational Terrorist Hostage Event (TTHE) Data Set, 1978 to 2018 by Wukki Kim, Justin George and Todd Sandler in Journal of Conflict Resolution
Additional file 1 of An interdisciplinary student-led multifaceted intervention addressing overuse of broad-spectrum antibiotics for patients with penicillin allergies
Creators: name: Banashefski, Bryana
name: Henson, Philip
name: David, Navindra
name: Kok, Hui Ting
name: Beerkens, Frans J.
name: Shyu, Margaret
name: Linker, Anne S.
name: Tsega, Surafel
name: Dunn, Andrew
name: Fuller, Risa
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Pharmacology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: Biological Sciences not elsewhere classified
subject: Marine Biology
subject: Science Policy

description: Additional file 1. The figure on this page displays best practices for antibiotic prescribing, represented as an algorithm developed by the antibiotic stewardship committee.
Supplementary_material - Personalized Computational Models of Tissue-Rearrangement in the Scalp Predict the Mechanical Stress Signature of Rotation Flaps
Creators: name: Taeksang Lee
name: Turin, Sergey Y.
name: Stowers, Casey
name: Gosain, Arun K.
name: Tepole, Adrian Buganza
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 110323 Surgery
subject: FOS: Clinical medicine

description: Supplementary_material for Personalized Computational Models of Tissue-Rearrangement in the Scalp Predict the Mechanical Stress Signature of Rotation Flaps by Taeksang Lee, Sergey Y. Turin, Casey Stowers, Arun K. Gosain and Adrian Buganza Tepole in The Cleft Palate-Craniofacial Journal
Supplementary document for Inverse design of mid-infrared diamond waveguide beam splitter - 7039061.pdf
Creators: name: Li, Yihao
name: Chen, Shu
name: Yu, Yanan
name: Li, Chen
name: Xiao, Tinghui
Publisher: name: Optica Publishing Group
Year: 2024
Subjects: Uncategorized

description: Supplement 1
Additional file 1 of External validation of the QLifetime cardiovascular risk prediction tool: population cohort study
Creators: name: Livingstone, Shona
name: Morales, Daniel R.
name: Fleuriot, Jacques
name: Donnan, Peter T.
name: Guthrie, Bruce
Publisher: name: figshare
Year: 2024
Subjects: Medicine
Biotechnology
Biological Sciences not elsewhere classified
Mathematical Sciences not elsewhere classified
Cancer

description: Additional file 1: Supplementary Table 1. Missing data. Supplementary Table S2. Incidence of cardiovascular disease during entire period of follow-up. Supplementary Table S3. Incidence of non-cardiovascular death during entire period of follow-up. Figure S1. Incidence of cardiovascular disease and non-cardiovascular death in men and women.
Supplementary document for Pound-Drever-Hall Feedforward: Laser Phase Noise Suppression beyond Feedback - 7039624.pdf
Creators: name: Chao, Yu-Xin
name: Hua, Zhen-Xing
name: Liang, Xin-Hui
name: Yue, Zong-Pei
name: You, Li
name: Tey, Meng
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: Experimental and calculation details
Additional file 4 of Diminished ovarian reserve may not be associated with a poorer fresh cycle outcome in women < 38 years
Creators: name: Jin, Huizi
name: Yan, Enqi
name: Chen, Dan
name: Zhao, Mengya
name: Peng, Wenju
name: Guo, Yaxin
name: Jin, Lei
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Biotechnology
subject: Chemical Sciences not elsewhere classified
subject: Immunology
subject: FOS: Clinical medicine
subject: Mathematical Sciences not elsewhere classified
subject: Developmental Biology
subject: Science Policy

description: Additional file 4: Supplemental Table 3. Singleton abnormal perinatal outcome in fresh cycles.
Supplementary document for Ultrafast carrier dynamics and nonlinear optical absorption of two dimensional NiPS3 nanosheets - 7040019.pdf
Creators: name: Zhang, Saifeng
name: Gong, Ziyao
name: Sun, Liaoxin
name: Yan, Lei
name: He, Qinyong
name: Ge, Anping
name: Shen, Dechao
name: ma, Guohong
name: Yang, Yunqi
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: Supplementary figure
Additional file 3 of Electric impedance tomography-guided PEEP titration reduces mechanical power in ARDS: a randomized crossover pilot trial
Creators: name: Jimenez, Jose Victor
name: Munroe, Elizabeth
name: Weirauch, Andrew J.
name: Fiorino, Kelly
name: Culter, Christopher A.
name: Nelson, Kristine
name: Labaki, Wassim W.
name: Choi, Philip J.
name: Co, Ivan
name: Standiford, Theodore J.
name: Prescott, Hallie C.
name: Hyzy, Robert C.
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Physical Sciences not elsewhere classified
subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: Marine Biology
subject: Science Policy

description: Additional file 3. Comparison of ventilator parameters.
Supplementary document for Ultrafast carrier dynamics and nonlinear optical absorption of two dimensional NiPS3 nanosheets - 7040019.pdf
Creators: name: Zhang, Saifeng
name: Gong, Ziyao
name: Sun, Liaoxin
name: Yan, Lei
name: He, Qinyong
name: Ge, Anping
name: Shen, Dechao
name: ma, Guohong
name: Yang, Yunqi
Publisher: name: Optica Publishing Group
Year: 2024
Subjects: Uncategorized

description: Supplementary figure
Supplementary document for Mid-infrared barium titanate electro-optic modulators based on germanium-on-silicon platform - 7040265.pdf
Creators: name: Huang, Tong
name: Ma, RuYuan
name: Liu, Yingxuan
name: Xu, Tianqi
name: qiu, yang
name: Zhao, Xingyan
name: Zheng, Shaonan
name: Zhong, Qize
name: Dong, Yuan
name: Hu, Ting
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: Design of MMI and the analysis of electrodes
Additional file 1 of Autocrine regulation of tumor cell repopulation by Hsp70-HMGB1 alarmin complex
Creators: name: Sverchinsky, Dmitry V.
name: Alhasan, Bashar A.
name: Mikeladze, Marina A.
name: Lazarev, Vladimir F.
name: Kuznetcova, Liubov S.
name: Morshneva, Alisa V.
name: Nikotina, Alina D.
name: Ziewanah, Amr
name: Koludarova, Lidia V.
name: Starkova, Tatiana Y.
name: Margulis, Boris A.
name: Guzhova, Irina V.
Publisher: name: figshare
Year: 2024
Subjects: subject: Biophysics
subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Pharmacology
subject: Cancer
subject: Plant Biology
subject: FOS: Biological sciences

description: Supplementary Material 1
Combined_supplemental_materials-Avallone_et_al - p53 Expression in Canine Liposarcoma Correlates With Myxoid Variant and Higher Proliferative Activity
Creators: name: Avallone, Giancarlo
name: Muscatello, Luisa V.
name: Leoni, Alessandro
name: Roccabianca, Paola
name: Lepri, Elvio
name: Crippa, Luca
name: Bacci, Barbara
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: FOS: Clinical medicine
subject: 70706 Veterinary Medicine
subject: FOS: Veterinary sciences

description: Combined_supplemental_materials-Avallone_et_al for p53 Expression in Canine Liposarcoma Correlates With Myxoid Variant and Higher Proliferative Activity by Giancarlo Avallone, Luisa V. Muscatello, Alessandro Leoni, Paola Roccabianca, Elvio Lepri, Luca Crippa and Barbara Bacci in Veterinary Pathology
Supplementary document for Mid-infrared barium titanate electro-optic modulators based on germanium-on-silicon platform - 7040265.pdf
Creators: name: Huang, Tong
name: Ma, RuYuan
name: Liu, Yingxuan
name: Xu, Tianqi
name: qiu, yang
name: Zhao, Xingyan
name: Zheng, Shaonan
name: Zhong, Qize
name: Dong, Yuan
name: Hu, Ting
Publisher: name: Optica Publishing Group
Year: 2024
Subjects: Uncategorized

description: Design of MMI and the analysis of electrodes
Supplementary document for Terahertz manipulation of nonlinear optical response in topological material PtBi2 - 7041241.pdf
Creators: name: Gao, Yu
name: Zeng, Xiangyi
name: Wang, Xinbo
name: Shi, You-Guo
name: Cheng, Liang
name: Qi, Jingbo
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: Additional data
Supplementary document for Terahertz manipulation of nonlinear optical response in topological material PtBi2 - 7041241.pdf
Creators: name: Gao, Yu
name: Zeng, Xiangyi
name: Wang, Xinbo
name: Shi, You-Guo
name: Cheng, Liang
name: Qi, Jingbo
Publisher: name: Optica Publishing Group
Year: 2024
Subjects: Uncategorized

description: Additional data
Bien vengas, mal, si vienes solo
Creators: name: Merlino, Elena
Publisher: name: Zenodo
Year: 2024
Subjects: Calderón
Métrica dramática
Segmentación dramática
Bibliografía
Bien vengas, mal, si vienes solo

description: Calderón Digital: base de datos, argumentos y motivos del teatro de Calderón (dir. Fausta Antonucci). Ficha dedicada a Bien vengas, mal, si vienes solo, con datos bibliográficos primarios y secundarios, fecha probable de composición, cómputo de las formas métricas, análisis de las coordenadas espacio-temporales, adscripción genérica y sinopsis argumental detallada, con indicación de los principales motivos (diegéticos y simbólicos) y propuesta de segmentación articulada según los cambios de forma métrica, de espacio y tiempo dramáticos.
Supplementary document for Spoof Surface Plasmons Spawning Pencil-beam Antennas of Subwavelength Profile - 7041877.pdf
Creators: name: Wang, Kai
name: Zhang, Zijian
name: Li, Yuanzhen
name: Dong, Zhaozhen
name: Chen, Hongsheng
name: Gao, Fei
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: The E-plane far-field radiation pattern of 2D-array slot antenna based on DPWs
Supplementary document for Spoof Surface Plasmons Spawning Pencil-beam Antennas of Subwavelength Profile - 7041877.pdf
Creators: name: Wang, Kai
name: Zhang, Zijian
name: Li, Yuanzhen
name: Dong, Zhaozhen
name: Chen, Hongsheng
name: Gao, Fei
Publisher: name: Optica Publishing Group
Year: 2024
Subjects: Uncategorized

description: The E-plane far-field radiation pattern of 2D-array slot antenna based on DPWs
Supplementary document for Multiple user-defined dispersive waves generation in silicon nitride waveguide - 7042000.pdf
Creators: name: YANG, Yijun
name: Turpaud, Victor
name: Lafforgue, Christian
name: Melati, Daniele
name: Wilmart, Quentin
name: Faugier-Tovar, Jonathan
name: Gianini, Linda
name: EDMOND, SAMSON
name: Cassan, Eric
name: Marris-Morini, Delphine
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: revised Supplement
Frequency-dependent returns in nonlinear public goods games
Creators: name: McAvoy, Alex
name: Hauert, Christoph
Publisher: name: The Royal Society
Year: 2024

description: When individuals interact in groups, the evolution of cooperation is traditionally modelled using the framework of public goods games. These models often assume that the return of the public goods depends linearly on the fraction of contributors. In contrast, in real-life public goods interactions, the return can depend on the size of the investor pool as well. Here, we consider a model in which the multiplication factor (marginal per capita return) for the public goods depends linearly on how many contribute, which results in a nonlinear model of public goods. This simple model breaks the curse of dominant defection found in linear public goods interactions and gives rise to richer dynamical outcomes in evolutionary settings. We provide an in-depth analysis of the more varied decisions by the classical rational player in nonlinear public goods interactions as well as a mechanistic, microscopic derivation of the evolutionary outcomes for the stochastic dynamics in finite populations and in the deterministic limit of infinite populations. This kind of nonlinearity provides a natural way to model public goods with diminishing returns as well as economies of scale.
sj-pdf-1-jcb-10.1177_0271678X20941393 - Supplemental material for Interleukin-4 improves white matter integrity and functional recovery after murine traumatic brain injury via oligodendroglial PPARγ
Creators: name: Pu, Hongjian
name: Zheng, Xuan
name: Jiang, Xiaoyan
name: Mu, Hongfeng
name: Xu, Fei
name: Zhu, Wen
name: Ye, Qing
name: Jizhang, Yunneng
name: Hitchens, T Kevin
name: Shi, Yejie
name: Hu, Xiaoming
name: Leak, Rehana K
name: Dixon, C Edward
name: Bennett, Michael VL
name: Chen, Jun
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: Emergency Medicine
subject: Endocrinology
subject: Medicine
subject: Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: Radiology and Organ Imaging
subject: Cell Biology
subject: Biochemistry
subject: Biological Sciences not elsewhere classified
subject: Neuroscience

description: Supplemental material, sj-pdf-1-jcb-10.1177_0271678X20941393 for Interleukin-4 improves white matter integrity and functional recovery after murine traumatic brain injury via oligodendroglial PPARγ by Hongjian Pu, Xuan Zheng, Xiaoyan Jiang, Hongfeng Mu, Fei Xu, Wen Zhu, Qing Ye, Yunneng Jizhang, T Kevin Hitchens, Yejie Shi, Xiaoming Hu, Rehana K Leak, C Edward Dixon, Michael VL Bennett and Jun Chen in Journal of Cerebral Blood Flow & Metabolism
Supplementary document for Multiple user-defined dispersive waves generation in silicon nitride waveguide - 7042000.pdf
Creators: name: YANG, Yijun
name: Turpaud, Victor
name: Lafforgue, Christian
name: Melati, Daniele
name: Wilmart, Quentin
name: Faugier-Tovar, Jonathan
name: Gianini, Linda
name: EDMOND, SAMSON
name: Cassan, Eric
name: Marris-Morini, Delphine
Publisher: name: Optica Publishing Group
Year: 2024
Subjects: Uncategorized

description: revised Supplement
Kasparek_Supplemental_Material – Supplemental material for Reward Processing Modulates the Association Between Trauma Exposure and Externalizing Psychopathology
Creators: name: Kasparek, Steven W.
name: Jenness, Jessica L.
name: McLaughlin, Katie A.
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology

description: Supplemental material, Kasparek_Supplemental_Material for Reward Processing Modulates the Association Between Trauma Exposure and Externalizing Psychopathology by Steven W. Kasparek, Jessica L. Jenness and Katie A. McLaughlin in Clinical Psychological Science
Cationized extracellular vesicles for gene delivery
Creators: name: Klyachko, Natalia L.
name: Lopukhov, Anton V.
name: Haney, Matthew J.
name: Le-Deygen, Irina M.
Publisher: name: Springer Nature
Year: 2024

description: Last decade, extracellular vesicles (EVs) attracted a lot of attention as potent versatile drug delivery vehicles. We reported earlier the development of EV-based delivery systems for therapeutic proteins and small molecule chemotherapeutics. In this work, we first time engineered EVs with multivalent cationic lipids for the delivery of nucleic acids. Stable, small size cationized EVs were loaded with plasmid DNA (pDNA), or mRNA, or siRNA. Nucleic acid loaded EVs were efficiently taken up by target cells as demonstrated by confocal microscopy and delivered their cargo to the nuclei in triple negative breast cancer (TNBC) cells and macrophages. Efficient transfection was achieved by engineered cationized EVs formulations of pDNA- and mRNA in vitro. Furthermore, siRNA loaded into cationized EVs showed significant knockdown of the reporter gene in Luc-expressing cells. Overall, multivalent cationized EVs represent a promising strategy for gene delivery.
The multifaceted role of mitochondria in cardiac function: insights and approaches
Creators: name: Ravindran, Sriram
name: Rau, Christoph D.
Publisher: name: Springer Nature
Year: 2024

description: Cardiovascular disease (CVD) remains a global economic burden even in the 21st century with 85% of deaths resulting from heart attacks. Despite efforts in reducing the risk factors, and enhancing pharmacotherapeutic strategies, challenges persist in early identification of disease progression and functional recovery of damaged hearts. Targeting mitochondrial dysfunction, a key player in the pathogenesis of CVD has been less successful due to its role in other coexisting diseases. Additionally, it is the only organelle with an agathokakological function that is a remedy and a poison for the cell. In this review, we describe the origins of cardiac mitochondria and the role of heteroplasmy and mitochondrial subpopulations namely the interfibrillar, subsarcolemmal, perinuclear, and intranuclear mitochondria in maintaining cardiac function and in disease-associated remodeling. The cumulative evidence of mitochondrial retrograde communication with the nucleus is addressed, highlighting the need to study the genotype-phenotype relationships of specific organelle functions with CVD by using approaches like genome-wide association study (GWAS). Finally, we discuss the practicality of computational methods combined with single-cell sequencing technologies to address the challenges of genetic screening in the identification of heteroplasmy and contributory genes towards CVD.
Additional file 1 of Development of an assay system for the analysis of host RISC activity in the presence of a potyvirus RNA silencing suppressor, HC-Pro
Creators: name: Hong, Syuan-Fei
name: Fang, Ru-Ying
name: Wei, Wei-Lun
name: Jirawitchalert, Supidcha
name: Pan, Zhao-Jun
name: Hung, Yu-Ling
name: Pham, Thanh Ha
name: Chiu, Yen-Hsin
name: Shen, Tang-Long
name: Huang, Chien-Kang
name: Lin, Shih-Shun
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Plant Biology

description: Additional file 1: Table S1. The primer list for this study.
Spherical-deconvolution Informed Filtering of Tractograms Changes Laterality of Structural Connectome
Creators: name: He, Yifei
name: Wu, Ye
name: Hong, Yoonmi
Publisher: name: Elsevier
Year: 2024

description: Diffusion MRI-driven tractography, a non-invasive technique that reveals how the brain is connected, is widely used in brain lateralization studies. To improve the accuracy of tractography in showing the underlying anatomy of the brain, various tractography filtering methods were applied to reduce false positives. Based on different algorithms, tractography filtering methods are able to identify the fibers most consistent with the original diffusion data while removing fibers that do not align with the original signals, ensuring the tractograms are as biologically accurate as possible. However, the impact of tractography filtering on the lateralization of the brain connectome remains unclear. This study aims to investigate the relationship between fiber filtering and laterality changes in brain structural connectivity. Three typical tracking algorithms were used to construct the raw tractography, and two popular fiber filtering methods(SIFT and SIFT2) were employed to filter the tractography across a range of parameters. Laterality indices were computed for six popular biological features, including four microstructural measures (AD, FA, RD, and T1/T2 ratio) and two structural features (fiber length and connectivity) for each brain region. The results revealed that tractography filtering may cause significant laterality changes in more than 10% of connections, up to 25% for probabilistic tracking, and deterministic tracking exhibited minimal laterality changes compared to probabilistic tracking, experiencing only about 6%. Except for tracking algorithms, different fiber filtering methods, along with the various biological features themselves, displayed more variable patterns of laterality change. In conclusion, this study provides valuable insights into the intricate relationship between fiber filtering and laterality changes in brain structural connectivity. These findings can be used to develop improved tractography filtering methods, ultimately leading to more robust and reliable measurements of brain asymmetry in lateralization studies.
Ocular Complications of Mpox: Evolving Understanding and Future Directions
Creators: name: Song, Helen
name: Fashina, Tolulope
name: Mwanza, Jean-Claude
name: Crozier, Ian
name: Yeh, Steven
name: Nguyen, Nam
name: Hartley, Caleb D.
name: Begley, Jack
name: Kaftan, Timothy
Publisher: name: Wolters Kluwer
Year: 2024

description: Mpox (formerly known as monkeypox), an infectious disease caused by the monkeypox virus (MPXV), has been endemic in regions of Central and Western Africa. In 2022, the global spread of the clade IIb MPXV led to a multinational outbreak, primarily affecting sexual transmission networks among men who have sex with men. Despite interventions, new cases have continued to emerge. In Africa, the spread of a novel strain of clade I MPXV, clade Ib, has prompted a Public Health Emergency of International Concern designation by the World Health Organization in August 2024. This article provides an updated overview of the epidemiology, systemic, and ocular manifestations, highlighting the clinical features, diagnostic testing, and implications relevant to ophthalmologists and eye care providers, including infection prevention and control measures. The ocular manifestations of mpox primarily involve the ocular surface and anterior segment, with presentations ranging from conjunctivitis to severe, vision-threatening keratitis and uveitis. While the 2022 to 2024 Clade IIb outbreak has shown a lower incidence of ocular involvement compared with previous outbreaks, the potential for significant visual morbidity remains. Treatment involves both systemic and topical therapies, with tecovirimat being the primary systemic option, though its efficacy and ophthalmic bioavailability remain under investigation. Ongoing surveillance and research are essential to further understand the epidemiology and ophthalmic features of mpox and, ultimately, to optimize prevention and treatment strategies for patients.
Supplementary_information_Final_Version_Calluso,_Zandi,_Devetag – Supplemental material for Cognitive Dynamics of Religiosity and Intertemporal Choice Behavior
Creators: name: Calluso, Cinzia
name: Zandi, Mohammad Amin
name: Devetag, Maria Giovanna
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 170199 Psychology not elsewhere classified
subject: FOS: Psychology

description: Supplemental material, Supplementary_information_Final_Version_Calluso,_Zandi,_Devetag for Cognitive Dynamics of Religiosity and Intertemporal Choice Behavior by Cinzia Calluso, Mohammad Amin Zandi and Maria Giovanna Devetag in Journal of Cross-Cultural Psychology
Supplementary document for A high sensitive Ga2O3 MSM solar-blind UV photodetector with impact ionization gain - 7042342.pdf
Creators: name: Wan, Qiyi
name: Zhang, Anzhen
name: Cao, Weiwei
name: Bai, Yonglin
name: Wang, Bo
name: Cheng, Hang
name: Wang, Gang
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: evaluation metrics of photodetectors, simulation utilizes physical models and their associated parameters, complex refractive index
Response to treatment with grapiprant as part of a standard multimodal regimen in young dogs with appendicular joint osteoarthritis associated pain
Creators: name: Thomson, Andrea
name: Cole, Tracey
name: Roe, Simon
name: Haupt, Emily
name: Sanchez, Maria D. Porcel
name: Nakanishi-Hester, Aoi
name: Enomoto, Masataka
name: Aker, Savannah
name: Thompson, Nichola Archer
name: Innes, John F.
name: Perry, Erin
name: Opperman, Logan
name: Hash, Jonathan
name: Lascelles, Benedict Duncan Xavier
Publisher: name: Frontiers
Year: 2024

description: The response to medical management of young dogs with osteoarthritis (OA) associated pain has not been evaluated. Using an open-label design, the effectiveness, over a 4-month period, of standardized management (grapiprant/fish oil/exercise) for treating OA pain in young dogs was evaluated. Included dogs were 9 months-4 years of age; ≥3.6 kg body weight; had ≥1 appendicular joint with radiographic OA and obvious joint pain; had a Liverpool Osteoarthritis in Dogs (LOAD) score of ≥5. The non-steroidal anti-inflammatory piprant (grapiprant) was given at the recommended dose daily, omega-3 fatty acid supplementation was initiated at 100 mg/kg and then increased to 200 mg/kg daily, and leash exercise was gradually increased to a target of 60 min daily. Client-reported outcome measures (CROMs) and force plate gait analysis were collected at baseline and monthly for 4 months. The index limb was defined as the most severely affected limb at baseline. Forty-eight dogs were enrolled (mean ± SD age of 30.7 ± 10.7 months). Hips, elbows, and stifles were commonly affected. Medication and supplement compliance was excellent (≥95% of target administered), and treatments were well-tolerated. CROMs showed significant improvement over time and at each time point. Overall, peak vertical force (PVF) increased significantly (<0.001), and vertical impulse increased numerically. Increase in PVF from baseline was significant at all time points except 4-months. This study demonstrates a clinically meaningful benefit of a multimodal treatment regimen over a 4-month period for young dogs (<4 years old) with OA-pain. Future work should determine if early, effective treatment is of long-term benefit.
A human-centered approach for sharing patient experiences through digital storytelling: a research through design study
Creators: name: Gill, Carolina
name: Tully, Kristin P.
name: Mahtani, Raunak
name: Umstead, Kelly
name: Behnam-asl, Sana
Publisher: name: Cambridge University Press (CUP)
Year: 2024

description: This article outlines a human-centered approach to developing digital patient stories, for sharing their experiences in health care, while preserving patient and others’ privacy. Employing a research-through-design approach, the study proposes a design solution using visualization and digital storytelling to document patients’ and families’ experiences and emotions, as well as their interactions with healthcare professionals in the postnatal unit. By transforming selected observational data into animated stories, this approach has the potential to elicit empathy, stimulate stakeholder engagement, and serve as a practical training tool for clinicians. This work was conducted as part of a broader study that aims to contribute to the existing knowledge base by advancing our understanding of stakeholder needs in birthing facilities and through postpartum discharge. This study primarily focuses on strategies for the development of digital stories and summarizes the factors that contributed to the production of digital stories within the context of sensitive data. It may serve as a valuable resource for students, researchers and practitioners interested in utilizing digital stories to encourage discussions, education and ultimately to enhance systems of health care for respect, equity and support.
Supplementary document for Efficient wideband tunable RF-optical signal conversion via triply-resonant active-passive photonic molecules - 7042519.pdf
Creators: name: Singh, Manuj
name: Zhang, Xinchang
name: Zhang, Bohan
name: Onural, Deniz
name: Gevorgyan, Hayk
name: Wang, Ruocheng
name: Stojanovic, Vladimir
name: Popovic, Milos
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: Theoretical derivations and analysis
sj-pdf-1-imr-10.1177_0300060520941332 - Supplemental material for Removal of giant spherical foreign body in the esophagus by double-forceps endoscope and double balloon
Creators: name: Yu, Shan
name: Wang, Xiaoming
name: Chen, Xin
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: Health and Community Services
subject: Cardiology
subject: Dentistry not elsewhere classified
subject: Emergency Medicine
subject: Endocrinology
subject: Geriatrics and Gerontology
subject: Neurology and Neuromuscular Diseases
subject: FOS: Clinical medicine
subject: Nursing not elsewhere classified
subject: Nutrition and Dietetics not elsewhere classified
subject: Oncology and Carcinogenesis not elsewhere classified
subject: Orthopaedics
subject: Sports Medicine
subject: Otorhinolaryngology
subject: Aged Health Care
subject: Paediatrics
subject: Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: Psychology not elsewhere classified
subject: Psychiatry (incl. Psychotherapy)
subject: Public Health and Health Services not elsewhere classified
subject: Respiratory Diseases
subject: Sociological Methodology and Research Methods
subject: Surgery

description: Supplemental material, sj-pdf-1-imr-10.1177_0300060520941332 for Removal of giant spherical foreign body in the esophagus by double-forceps endoscope and double balloon by Shan Yu, Xiaoming Wang and Xin Chen in Journal of International Medical Research
Enhanced susceptibility of pediatric airway epithelium to respiratory syncytial virus infection.
Creators: name: Randell, Scott H
name: Chen, Gang
name: Pickles, Raymond J
Publisher: name: American Society for Clinical Investigation
Year: 2024

description: Immature innate and adaptive immunity and vulnerability of narrower airways to obstruction increase the susceptibility of infants to severe respiratory syncytial virus (RSV) disease. In this issue of the JCI, Zhao et al. illustrated greater intrinsic susceptibility of pediatric versus adult airway epithelial cells to RSV-induced cytopathology. Using precision cut lung slices (PCLS) and air-liquid interface (ALI) airway epithelial cell cultures, the authors showed that impaired STAT3 activation in RSV-infected pediatric multiciliated cells increased cell apoptosis and viral shedding, which enhanced the spread of infection. Bolstering STAT3 activation and treatment of neonatal mice with apoptosis inhibitors suppressed virus spread, suggesting that enhancing STAT3 activation may provide therapeutic benefit.
Supplementary document for Hyperentanglement Quantum Communication over 50 km Noisy Fiber Channel - 7043718.pdf
Creators: name: Zhong, Zhen-Qiu
name: Zhan, Xiao-Hai
name: Chen, Jia-Lin
name: Wang, Shuang
name: Yin, Zhen-Qiang
name: Geng, Jiaqi
name: He, De-Yong
name: Chen, Wei
name: Guo, Guang-can
name: Han, Zhen-fu
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: The experimental setup and the simulation model of the curve in the figures are supplemented.
Supplementary document for Hyperentanglement Quantum Communication over 50 km Noisy Fiber Channel - 7043718.pdf
Creators: name: Zhong, Zhen-Qiu
name: Zhan, Xiao-Hai
name: Chen, Jia-Lin
name: Wang, Shuang
name: Yin, Zhen-Qiang
name: Geng, Jiaqi
name: He, De-Yong
name: Chen, Wei
name: Guo, Guang-can
name: Han, Zhen-fu
Publisher: name: Optica Publishing Group
Year: 2024
Subjects: Uncategorized

description: The experimental setup and the simulation model of the curve in the figures are supplemented.
Supplementary Material 1 - Supplemental material for Antiallergic Effects of Phenolic Compounds Isolated From Stellera chamaejasme on RBL-2H3 Cells
Creators: name: Beom-Geun Jo
name: Sim-Kyu Bong
name: Jonghwan Jegal
name: Su-Nam Kim
name: Yang, Min Hye
Publisher: name: SAGE Journals
Year: 2020
Subjects: subject: 111599 Pharmacology and Pharmaceutical Sciences not elsewhere classified
subject: FOS: Clinical medicine

description: Supplemental material, Supplementary Material 1, for Antiallergic Effects of Phenolic Compounds Isolated From Stellera chamaejasme on RBL-2H3 Cells by Beom-Geun Jo, Sim-Kyu Bong, Jonghwan Jegal, Su-Nam Kim and Min Hye Yang in Natural Product Communications
Supplementary document for Dark field optical microscopy for analyzing single plasmonic nanoparticles: a tutorial - 7043760.pdf
Creators: name: Abadie, Claire
name: Liu, Mingyang
name: Prado, Yoann
name: Pluchery, Olivier
Publisher: name: Optica Publishing Group
Year: 2025
Subjects: Uncategorized

description: Supplem doc with 13 fig
The humanistic burden of immunoglobulin A nephropathy on patients and care-partners in the United States
Creators: name: Bensink, Mark
name: Smith, Philip
name: Hazra, Nisha C.
name: Gibson, Keisha
name: Szklarzewicz, Justyna
name: Schneider, Bonnie
name: Zhou, Zheng-Yi
name: Robinson, Dale
name: Floege, Ute
name: Jauregui, Adam K.
name: Hendry, Bruce
name: Wang, Aolin
name: Kalantar-Zadeh, Kamyar
name: Liu, Jingyi
name: Tullus, Kjell
name: Balkaran, Bridget L.
name: Xu, Chunyi
name: Helm, Kelly
name: Poyan-Mehr, Ali
name: Nason, Ian
name: Gallego, Daniel
Publisher: name: Springer Nature
Year: 2024

description: Purpose This cross-sectional survey study quantified the humanistic burden of immunoglobulin A nephropathy (IgAN), in terms of physical and mental health-related quality of life (HRQoL) and work productivity, among adults with primary IgAN and their care-partners. Methods HRQoL was assessed (01/31/22 − 05/31/23) with validated tools including the KDQoL-36 (with SF-12), GAD-7 (anxiety), PHQ-9 (depression), and WPAI: SHP (work productivity). Participant characteristics and total/domain scores were summarized; selected outcomes were compared to an external, kidney disease-free cohort. Results 117 adults with IgAN and their care-partner pairs, and one adult without a care-partner, were included. The mean ages of patients and care-partners were 38.0 (SD: 8.6) and 40.2 (11.8) years, respectively; 55.9% and 43.6% were female. Mean physical and mental SF-12 scores for patients were 46.7 (SD: 8.0) and 41.9 (9.2), respectively, and 50.7 (7.3) and 43.7 (10.24) for care-partners. Both SF-12 components for patients, and the mental component for care-givers, were significantly worse compared to the US general population. Among patients, 27.1% had moderate/severe anxiety and 49.2% reported at least moderate depression. Compared to external controls, patients experienced significantly higher severity of anxiety (6.6 vs. 5.4) and depression (8.1 vs. 6.6; both p < 0.0001). Among care-partners, 13.7% experienced moderate anxiety and 37.8% experienced moderate/moderately-severe depression. Among employed individuals, both groups reported IgAN-related absenteeism (8.8–9.4%), presenteeism (25.1–25.9%), and overall work impairment (30.4–30.5%). Conclusion US adults with IgAN and their care partners experience impairments to mental and physical HRQoL and heightened levels of depression and anxiety, underscoring the need for effective IgAN therapies and care-partner support.
Identification of allele-specific KIV-2 repeats and impact on Lp(a) measurements for cardiovascular disease risk
Creators: name: Qi, Qibin
name: Eberle, Michael A.
name: Chen, Xiao
name: Gibbs, Richard A.
name: Newman, Emma
name: Rossi, Massimiliano
name: Muzny, Donna M.
name: Metcalf, Ginger A.
name: Paulin, Luis F.
name: Rodriguez, Carlos J.
name: Menon, Vipin K.
name: Joshi, Parag
name: Roller, Eric
name: Boerwinkle, Eric
name: Sedlazeck, Fritz J.
name: Nguyen, Ngoc Quynh H.
name: Mahmoud, Medhat
name: Kaplan, Robert C.
name: Avery, Christy L.
name: Ballantyne, Christie M.
name: Behera, Sairam
name: Yu, Bing
name: Belyeu, Jonathan R.
name: Han, James
name: Onuchic, Vitor
name: Marcovina, Santica
Publisher: name: Springer Nature
Year: 2024

description: The abundance of Lp(a) protein holds significant implications for the risk of cardiovascular disease (CVD), which is directly impacted by the copy number (CN) of KIV-2, a 5.5 kbp sub-region. KIV-2 is highly polymorphic in the population and accurate analysis is challenging. In this study, we present the DRAGEN KIV-2 CN caller, which utilizes short reads. Data across 166 WGS show that the caller has high accuracy, compared to optical mapping and can further phase approximately 50% of the samples. We compared KIV-2 CN numbers to 24 previously postulated KIV-2 relevant SNVs, revealing that many are ineffective predictors of KIV-2 copy number. Population studies, including USA-based cohorts, showed distinct KIV-2 CN, distributions for European-, African-, and Hispanic-American populations and further underscored the limitations of SNV predictors. We demonstrate that the CN estimates correlate significantly with the available Lp(a) protein levels and that phasing is highly important.
Efficacy, safety, and quality of life 4 years after valoctocogene roxaparvovec gene transfer for severe hemophilia A in the phase 3 GENEr8-1 trial
Creators: name: Ozelo, Margareth C.
name: Madan, Bella
name: Peyvandi, Flora
name: Pepperell, Dominic
name: Chambost, Hervé
name: Millar, Carolyn M.
name: Kenet, Gili
name: Fernández, Maria Fernanda López
name: Leavitt, Andrew D.
name: Robinson, Tara M.
name: Pipe, Steven W.
name: Mason, Jane
name: Quon, Doris V.
name: Giermasz, Adam
name: Mahlangu, Johnny
name: Majerus, Elaine
name: Yu, Hua
name: Chou, Sheng-Chieh
name: Raheja, Priyanka
name: Symington, Emily
name: Klamroth, Robert
name: Rivat, Christine
name: Lowe, Gillian
name: Key, Nigel S.
Publisher: name: Elsevier
Year: 2024

description: Background Valoctocogene roxaparvovec, an adeno-associated virus-mediated gene therapy for severe hemophilia A, enables endogenous factor VIII (FVIII) expression and provides bleed protection. Objectives Determine valoctocogene roxaparvovec durability, efficacy, and safety 4 years post-treatment. Methods In the phase 3 GENEr8-1 trial, 134 adult males with severe hemophilia A without inhibitors and previously using FVIII prophylaxis received a 6x1013 vg/kg infusion of valoctocogene roxaparvovec. Efficacy endpoints included annualized bleed rate (ABR), annualized FVIII infusion rate, FVIII activity, and the Haemophilia-Specific Quality of Life Questionnaire for Adults (Haemo-QOL-A). Adverse events (AEs) and immunosuppressant use were assessed. Change from baseline was assessed after participants discontinued prophylaxis (scheduled for week 4). Results Median follow-up was 214.3 weeks; 2 participants discontinued since the previous data cutoff. Declines from baseline in mean treated ABR (−82.6%; P<0.0001) and annualized FVIII infusion rate (−95.5%; P<0.0001) were maintained from previous years in the primary analysis population of 112 participants who enrolled from a noninterventional study. During year 4, 81/110 rollover participants experienced 0 treated bleeds. Week 208 mean and median chromogenic FVIII activity were 16.1 IU/dL and 6.7 IU/dL, respectively, in 130 modified intention-to-treat (mITT) participants. Seven participants resumed prophylaxis since the previous data cutoff. Mean change from baseline to week 208 in Haemo-QOL-A Total Score (P<0.0001) remained clinically meaningful for mITT participants. Alanine aminotransferase elevation was the most common AE during year 4 (56/131 participants); none required immunosuppressants. Conclusions Valoctocogene roxaparvovec provides persistent FVIII expression, hemostatic control, and health-related quality of life improvements with no new safety signals.
Additional file 1 of Tumor lineage-specific immune response in brain metastatic disease: opportunities for targeted immunotherapy regimen?
Creators: name: Najjary, Shiva
name: Kros, Johan M.
name: de Koning, Willem
name: Vadgama, Disha
name: Lila, Karishma
name: Wolf, Janina
name: Mustafa, Dana A. M.
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Additional file 1. Table S1. The list of housekeeping genes used for the normalization of genes. Table S2. List of (A) morphological markers, and (B) antibodies included in the core panel and module used in DSP. Table S3. Details of antibodies used in multiplex immunofluorescence staining.