cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
NIHAO-RiNG: A Comparison of Simulated Disc Galaxies from GASOLINE and GIZMO
Creators: name: Chen, Hou-Zun
name: Kang, Xi
name: Macciò, Andrea V.
name: Buck, Tobias
name: Cen, Renyue
Publisher: name: arXiv
Year: 2023
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We utilize the public GIZMO code to simulate twelve disc galaxies from the NIHAO suite simulated with the GASOLINE code, then compare the corresponding galaxies in the two simulations. We find that while both codes with the same initial conditions and large-scale environments can successfully produce similar disc galaxies, significant differences are still seen in many properties of the galaxies, particularly in the circumgalactic medium (CGM) environment they reside. Specifically, the thermal feedback recipe used in GASOLINE results in ubiquitous long-lasting collimated outflows, primarily driven by high-density hot interstellar medium (ISM) from the galaxy center, and inflows of gas not aligned with the outflow cools rapidly and flows towards the galactic center. In contrast, galaxies from GIZMO code do not exhibit large-scale outflows at low redshifts, but instead display quasi-virialized hot gaseous halos that arise from the strong interaction between inflow of gas and feedback driven outflow. Therefore, the origins of mass and angular momentum of the cold disc in the two simulations are quite different, even though the final morphologies of corresponding galaxies are similar at $z\sim0$. The differences in the distribution of CGM gas are mainly due to different feedback models implemented in the two codes, thus future observations of CGM provide valuable insight into the physics governing the baryon cycle in disc galaxies.
description: 18 pages, 11 figures, accepted for publication in ApJ, Comments welcome
Generally applicable physics-based equation of state for liquids
Creators: name: Proctor, J. E.
name: Trachenko, K.
Publisher: name: arXiv
Year: 2023
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Materials Science (cond-mat.mtrl-sci)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: Physics-based first-principles pressure-volume-temperature equations of state (EOS) exist for solids and gases but not for liquids due to the long-standing fundamental problems involved in liquid theory. Current EOS models that are applicable to liquids and supercritical fluids at liquid-like density under conditions relevant to planetary interiors and industrial processes are complex empirical models with many physically meaningless adjustable parameters. Here, we develop a generally applicable physics-based (GAP) EOS for liquids including supercritical fluids at liquid-like density. The GAP equation is explicit in the internal energy, and hence links the most fundamental macroscopic static property of fluids, the pressure-volume-temperature EOS, to their key microscopic property: the molecular hopping frequency or liquid relaxation time, from which the internal energy can be obtained. We test our GAP equation against available experimental data in several different ways and find good agreement. Our GAP equation, unavoidably and similarly to solid EOS, contains a semi-empirical term giving the energy of the static sample as a function of volume only (E_ST(V)). Our testing includes studies along isochores, in order to examine the validity of the GAP equation independently of the validity of any function we may choose to utilize for E_ST(V). The only other adjustable parameter in the equation is the Gruneisen parameter for the fluid. We observe that the GAP equation is similar to the Mie-Gruneisen solid EOS in a wide range of the liquid phase diagram. This similarity is ultimately related to the condensed state of these two phases. On the other hand, the differences between the GAP equation and EOS for gases are fundamental. Finally, we identify the key gaps in the experimental data that need to be filled in to proceed further with the liquid EOS.
Accelerated Bayesian Inference for Molecular Simulations using Local Gaussian Process Surrogate Models
Creators: name: Shanks, B. L.
name: Sullivan, H. W.
name: Shazed, A. R.
name: Hoepfner, M. P.
Publisher: name: arXiv
Year: 2023
Subjects: subject: Chemical Physics (physics.chem-ph)
subject: Soft Condensed Matter (cond-mat.soft)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: While Bayesian inference is the gold standard for uncertainty quantification and propagation, its use within physical chemistry encounters formidable computational barriers. These bottlenecks are magnified for modeling data with many independent variables, such as X-ray/neutron scattering patterns and electromagnetic spectra. To address this challenge, we apply a Bayesian framework accelerated via local Gaussian process (LGP) surrogate models. We show that the time-complexity of LGPs scales linearly in the number of independent variables, in stark contrast to the computationally expensive cubic scaling of conventional Gaussian processes. To illustrate the method, we trained a LGP surrogate model on the experimental radial distribution function of liquid neon, and observed a remarkable 288,000-fold speed-up compared to molecular dynamics with insignificant loss in predictive accuracy. We conclude that LGPs are robust and efficient surrogate models, poised to expand the application of Bayesian inference in molecular simulations to a broad spectrum of ever-advancing experimental data.
Polypedilum atroari Bidawid-Kafka 1996
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum atroari

description: atroari Bidawid-Kafka, 1996: Entomofauna, 17: 190 (Polypedilum (Tripodura )).
Type locality. Brazil (Rio Cuieiras, unterer Rio Negro, Mündung des Igarapé Cachoeira).
Distribution. NT: Brazil (Amazonas).
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 41, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
A coadjoint orbit-like construction for Jordan superalgebras
Creators: name: Ciaglia, Florio M.
name: Jiang, Shuhan
name: Jost, Jürgen
name: Schwachhöfer, Lorenz
Publisher: name: arXiv
Year: 2023
Subjects: subject: Differential Geometry (math.DG)
subject: FOS: Mathematics
subject: 17A70, 58A50

description: We investigate the canonical pseudo-Riemannian metrics associated with Jordan-analogues of the coadjoint orbits for pseudo-Euclidean Jordan superalgebras.
description: 20 pages, 1 figure
Additional file 1: of Intimate partner violence norms cluster within households: an observational social network study in rural Honduras
Creators: name: Shakya, Holly
name: D. Hughes
name: Stafford, Derek
name: Christakis, Nicholas
name: Fowler, James
name: Silverman, Jay
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Sociology
subject: FOS: Sociology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Computational Biology

description: Online appendix for: Intimate partner violence norms cluster within households: a sociocentric network study in rural Honduras. (DOCX 146 kb)
Small-scale Dynamo in Cool Stars III. Changes in the photospheres of F3V to M0V stars
Creators: name: Bhatia, Tanayveer S.
name: Cameron, Robert H.
name: Peter, Hardi
name: Solanki, Sami K.
Publisher: name: arXiv
Year: 2023
Subjects: subject: Solar and Stellar Astrophysics (astro-ph.SR)
subject: FOS: Physical sciences

description: Some of the quiet solar magnetic flux could be attributed to a small-scale dynamo (SSD) operating in the convection zone. An SSD operating in cool main-sequence stars is expected to affect the atmospheric structure, in particular the convection, and should have observational signatures. We aim to investigate the distribution of these fields as well as their effect on intensity characteristics, velocities and spatial distribution of kinetic (KE) and magnetic energy (ME) in the lower photosphere of spectral types F3V, G2V, K0V and M0V using 3D radiative-MHD simulations. PDFs of field strength at the $τ=1$ surface are quite similar for all cases. The M0V star displays the strongest fields, but relative to the gas pressure, the fields on the F3V star reach the largest values. All stars display an excess of horizontal field relative to vertical field in the middle photosphere, with this excess becoming increasingly prominent towards later spectral types. These fields result in a decrease in upflow velocities, slightly smaller granules as well as the formation of bright points in intergranular lanes. The spatial distribution of KE and ME is also similar for all cases, implying a simple pressure scale height proportionality of important scales. SSD fields have rather similar effects on the photospheres of cool main-sequence stars, namely, a significant reduction in convective velocities as well as a slight reduction in granule size, and concentration of field to kG levels in intergranular lanes associated with the formation of bright points. The distribution of field strengths and energies is also rather similar.
description: 11 pages, 14 figures, accepted for publication in A&A
Polypedilum atroari Bidawid-Kafka 1996
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum atroari

description: bacalar Vinogradova, 2008: Spixiana 31(2): 279.
Type locality. Mexico, Quintana Roo, near Chetumal, Lake Bacalar
Distribution. NT: Mexico.
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 41, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Evaluation of risk management practices: data analysis of NHS England hospitals
Creators: name: Kaya, GK
name: Canbaz, HT
name: Ward, J
name: Clarkson, PJ
Publisher: name: Istanbul Technical University
Year: 2016

description: Risk management practices are applied in the National Health Service (NHS) England hospitals to reduce harm rates and to ensure safety. This study evaluates current risk management practices in the NHS England hospitals through highlighting non-compliance issues within the practice and through explaining board level risk priorities. All data were collected for selected (N=34) NHS England hospitals. Data were gathered from the NHS Litigation Authority (NHSLA) reports to reveal risk management problems and from Board Assurance Frameworks (BAF) to define top risks. Results from an external authority of the NHSLA show that local induction of staff is a major non-compliance issue for risk management practice with more than half of the hospitals having difficulties. Following that supervision of medical staff in training is the second highly observed deficiency. Results from hospitals’ board level demonstrate that top risks in hospitals were regarding quality and performance issues. Additionally, most of the board level defined top risks were categorized as organizational and clinical-related risks. Within these, workforce issues and non-compliance with requirements are highlighted as top risks for organizational-related risks while Accident and Emergency (A&E) targets and treatment delays are prioritized as part of clinical-related risks. Financial deficit is also frequently defined at board level as a top risk for financial-related risks. Both the NHSLA and hospital board level assessments show that workforce related issues are still a major concern in hospital risk management practices. It is therefore a slight influence of an external authority (NHSLA) has been recognized on prioritization of board level defined risks.
Ransonia Blandin 1979
Creators: name: Tonini, Lorena
name: Silva, Juliana Paulo Da
name: Filho, Arlindo Serpa
name: Freitas, Joelcio
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Cnidaria
Hydrozoa
Trachymedusae
Rhopalonematidae
Ransonia

description: Ransonia Blandin, 1979
The genus Ransonia Blandin, 1979 (Arachnida: Araneae) was established with description of a new species, Ransonia mahasoana of the family Pisauridae (Arachnida: Araneae) endemic from Mahasoa, Madagascar. Unfortunately, this name is preoccupied by Ransonia Kramp, 1947, a genus of the family Rhopalonematidae (Hydrozoa: Trachymedusae) with only one species, Ransonia (Aglantha) krampi Ranson (1932), from Gibraltar, Mediterranean. According to article 60 of the International Code of Zoological Nomenclature a new substitute name is necessary, since Ransonia Blandin, 1979 does not have a junior synonym applicable and is a junior homonym of another genus. Therefore, we propose a replacement name for the spider genus as follows.
description: Published as part of Tonini, Lorena, Silva, Juliana Paulo Da, Filho, Arlindo Serpa & Freitas, Joelcio, 2016, Replacement names for two preoccupied generic names in Arthropoda, pp. 125-126 in Zootaxa 4097 (1) on page 125, DOI: 10.11646/zootaxa.4097.1.7, http://zenodo.org/record/261072
Additional file 2: Figure S1. of The RESPITE trial: remifentanil intravenously administered patient-controlled analgesia (PCA) versus pethidine intramuscular injection for pain relief in labour: study protocol for a randomised controlled trial
Creators: name: Wilson, Matthew
name: MacArthur, Christine
name: Smith, Fang Gao
name: Homer, Leanne
name: Handley, Kelly
name: Daniels, Jane
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Cell Biology
subject: Developmental Biology
subject: Cancer
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: RESPITE trial schema. (DOC 344Â kb)
Polypedilum bakairi Bidawid & Fittkau 1995
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum bakairi

description: bakairi Bidawid & Fittkau, 1995: Entomofauna, 16: 526 (Polypedilum (Tripodura )).
Type locality. Brazil (Rio Marauia, Unterlauf).
Distribution. NT: Brazil (Pará, Amazonas).
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 41, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Last drinking occasion: 15 to 17-year-olds
Creators: name: Holland, Kate
Publisher: name: Health New Zealand
Year: 2024
Subjects: classificationCode: 420603
subject: Health promotion

description: Four in nine New Zealanders report the first time they consumed a large amount of alcohol on one drinking occasion was when they were 15 to 17-years-old. The Health Promotion Agency (HPA) advises that for young people aged 15 to17 years, the safest option is to delay drinking for as long as possible. HPA’s Attitudes and Behaviour towards Alcohol Survey (ABAS) monitors New Zealanders’ behaviour and attitudes towards alcohol, including those related to last month alcohol consumption. This fact sheet reports on alcohol use among those aged 15-17 years.
Additional file 1: Fig. S1. of Lentiviral vector-mediated overexpression of mutant ataxin-7 recapitulates SCA7 pathology and promotes accumulation of the FUS/TLS and MBNL1 RNA-binding proteins
Creators: name: Alves, Sandro
name: Marais, Thibaut
name: Maria-Grazia Biferi
name: Furling, Denis
name: Marinello, Martina
name: Hachimi, Khalid El
name: Cartier, Nathalie
name: Ruberg, Merle
name: Stevanin, Giovanni
name: Brice, Alexis
name: Barkats, Martine
name: Sittler, Annie
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Molecular Biology
subject: Neuroscience
subject: Physiology
subject: Biotechnology
subject: Developmental Biology
subject: Cancer
subject: 60506 Virology

description: Lentiviral-mediated overexpression of the Green Fluorescent Protein (GFP) in the mouse cerebellum. Fig. S2. Overexpression of truncated MUT ATXN7 in the mouse cerebellum induces the formation of ubiquitinated ATXN7 aggregates Fig. S3. Lentiviral-mediated overexpression MUT ATXN7 in the mouse cerebellum, at 2Â weeks post-infection (early time point). Fig. S4. Phosphorylated TDP-43 expression in the cerebellum of Atxn7 100Q/5Q KI mice. Fig. S5. FUS/TLS is trapped in ATXN7 aggregates in Atxn7 100Q/5Q KI mice. Fig. S6. MBNL1 and MBNL2 immunoreactivity and expression in the cerebellum of Atxn7 100Q/5Q KI mice. (PDF 1053Â kb)
Multiplicative SHE limit of random walks in space-time random environments
Creators: name: Das, Sayan
name: Drillick, Hindy
name: Parekh, Shalin
Publisher: name: arXiv
Year: 2023
Subjects: subject: Probability (math.PR)
subject: Mathematical Physics (math-ph)
subject: FOS: Mathematics
subject: FOS: Physical sciences

description: We show that under a certain moderate deviation scaling, the multiplicative-noise stochastic heat equation (SHE) arises as the fluctuations of the quenched density of a 1D random walk whose transition probabilities are iid [0,1]-valued random variables. In contrast to the case of directed polymers in the intermediate disorder regime, the variance of our weights is fixed rather than vanishing under the diffusive rescaling of space-time. Consequently, taking a naive limit of the chaos expansion fails for this model, and a nontrivial noise coefficient is observed in the limit. Rather than using chaos techniques, our proof instead uses the fact that in this regime the quenched density solves a discrete SPDE which resembles the SHE. As a byproduct of our techniques, it is shown that independent noise is generated in the limit, in the sense that the prelimiting noise field does not converge to the driving noise of the limiting SPDE.
description: 63 pages, 1 figure. Probab. Theory Relat. Fields (2024)
Blandinia Tonini, Silva, Filho & Freitas, 2016, nom. nov.
Creators: name: Tonini, Lorena
name: Silva, Juliana Paulo Da
name: Filho, Arlindo Serpa
name: Freitas, Joelcio
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Pisauridae
Blandinia

description: Blandinia, nom. nov.
Nomen novum pro Ransonia Blandin, 1979: 372 nec Ransonia Kramp, 1947: 12.
Type species, through original monotypy under Ransonia Blandin, 1979: Ransonia mahasoana Blandin, 1979: 372. Included species: Blandinia mahasoana (Blandin, 1979).
Etymology. The new name is dedicated to Dr. Patrick Blandin, who described originally Ransonia mahasoana.
description: Published as part of Tonini, Lorena, Silva, Juliana Paulo Da, Filho, Arlindo Serpa & Freitas, Joelcio, 2016, Replacement names for two preoccupied generic names in Arthropoda, pp. 125-126 in Zootaxa 4097 (1) on page 125, DOI: 10.11646/zootaxa.4097.1.7, http://zenodo.org/record/261072
Saddle avoidance of noise-induced transitions in multiscale systems
Creators: name: Börner, Reyk
name: Deeley, Ryan
name: Römer, Raphael
name: Grafke, Tobias
name: Lucarini, Valerio
name: Feudel, Ulrike
Publisher: name: arXiv
Year: 2023
Subjects: subject: Dynamical Systems (math.DS)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Neurons and Cognition (q-bio.NC)
subject: Populations and Evolution (q-bio.PE)
subject: FOS: Mathematics
subject: FOS: Physical sciences
subject: FOS: Biological sciences

description: In multistable dynamical systems driven by weak Gaussian noise, transitions between competing states are often assumed to pass via a saddle on the separating basin boundary. By contrast, we show that timescale separation can cause saddle avoidance in non-gradient systems. Using toy models from neuroscience and ecology, we study cases where sample transitions deviate strongly from the instanton predicted by Freidlin-Wentzell theory, even for weak finite noise. We attribute this to a flat quasipotential and present an approach based on the Onsager-Machlup action to aptly predict transition paths.
description: Resubmitted version 2
MOESM6 of Prioritization of anti-malarial hits from nature: chemo-informatic profiling of natural products with in vitro antiplasmodial activities and currently registered anti-malarial drugs
Creators: name: Egieyeh, Samuel
name: Syce, James
name: Sarel Malan
name: Christoffels, Alan
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Neuroscience
subject: Pharmacology
subject: Ecology
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Computational Biology

description: Additional file 6. Four-dimensional plot of Lipinskiâ  s rule of five for compound sets. NAA relative to CRAD.
Polypedilum baniva Bidawid & Fittkau 1995
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum baniva

description: baniva Bidawid & Fittkau, 1995: Entomofauna, 16: 498 (Polypedilum (Tripodura )).
Type locality. Brazil (Rio Marauia, Stromschnelle oberhalb Mission S. Antonio).
Distribution. NT: Brazil (Amazonas).
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 41, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Analytical and numerical validation of a plate-plate tribometer for measuring wall slip
Creators: name: Asghar, Muhammad Hassan
name: Maric, Tomislav
name: Gozlen, Houssem Ben
name: Raju, Suraj
name: Fricke, Mathis
name: Kuhr, Maximilian
name: Pelz, Peter F.
name: Bothe, Dieter
Publisher: name: arXiv
Year: 2023
Subjects: subject: Fluid Dynamics (physics.flu-dyn)
subject: FOS: Physical sciences

description: We model the Darmstadt Slip Length Tribometer (DSLT), specially designed to measure viscosity and slip length simultaneously for lubrication gaps in the range of approximately 10 micrometres at relevant temperatures and surface roughness. We investigate the inlet effect of the flow on the results by varying the inner radius of the fluid inlet pipe. The outcomes of numerical simulations suggest that variations in the diameter of this inner radius have minimal impact on the results. Specifically, any alterations in the velocity profile near the inlet, brought about by changes in the diameter, quickly revert to the profile predicted by the analytical model. The main conclusion drawn from this study is the validation of the Navier-Slip boundary condition as an effective model for technical surface roughness in CFD simulations and the negligible influence of the inlet effect on the fluid dynamics between the tribometer's plates.
Æ codes
Creators: name: Jain, Shubham P.
name: Hudson, Eric R.
name: Campbell, Wesley C.
name: Albert, Victor V.
Publisher: name: arXiv
Year: 2023
Subjects: subject: Quantum Physics (quant-ph)
subject: Atomic Physics (physics.atom-ph)
subject: FOS: Physical sciences

description: Diatomic molecular codes [arXiv:1911.00099] are designed to encode quantum information in the orientation of a diatomic molecule, allowing error correction from small torques and changes in angular momentum. Here, we directly study noise native to atomic and molecular platforms -- spontaneous emission, stray electromagnetic fields, and Raman scattering -- and show that diatomic molecular codes fail against this noise. We derive simple necessary and sufficient conditions for codes to protect against such noise. We also identify existing and develop new absorption-emission (Æ) codes that are more practical than molecular codes, require lower average momentum, can directly protect against photonic processes up to arbitrary order, and are applicable to a broader set of atomic and molecular systems.
description: 5+5 pages, 3 figures. Added appendix about non-locality of spontaneous decay
Additional file 6: of Gene expression analysis at the onset of sex differentiation in turbot (Scophthalmus maximus)
Creators: name: Robledo, Diego
name: Ribas, Laia
name: Cal, Rosa
name: Sánchez, Laura
name: Piferrer, Francesc
name: Martínez, Paulino
name: Viñas, Ana
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Marine Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: PCR primers. Forward and reverse primers for each amplified gene are shown. Furthermore, GenBank accession numbers for template sequences for primer design and amplicon size are shown. (DOCX 16 kb)
Polypedilum bicrenatum Kieffer 1921
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum bicrenatum

description: bicrenatum Kieffer, 1921: Bulletin de la Société d’Histoire Nature de la Moselle, 29: 74 (Polypedilum).
Type locality. Poland (Silésie).
Distribution. PA: Germany, Denmark, Italy, Ireland, Norway, Netherland, Poland, Sweden, Finland, Romania, Russia, Mongolia.
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 41, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Additional file 1: Table S1. of Investigating mechanisms underpinning the detrimental impact of a high-fat diet in the developing and adult hypermuscular myostatin null mouse
Creators: name: Matsakas, Antonios
name: Domenick Prosdocimo
name: Mitchell, Robert
name: Collins-Hooper, Henry
name: Natasa Giallourou
name: Swann, Jonathan
name: Potter, Paul
name: Epting, Thomas
name: Jain, Mukesh
name: Ketan Patel
Publisher: name: Figshare
Year: 2015
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Hematology
subject: Computational Biology

description: Blood parameters. Values from minimum of six male mice. (DOCX 13 kb)
Additional file 1: of Decomposing the heterogeneity of depression at the person-, symptom-, and time-level: latent variable models versus multimode principal component analysis
Creators: name: Vos, Stijn De
name: Wardenaar, Klaas
name: Bos, Elisabeth
name: Wit, Ernst
name: Jonge, Peter De
Publisher: name: Figshare
Year: 2015
Subjects: subject: Molecular Biology
subject: Marine Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: A pdf file containing the Mplus scripts for the presented latent variable models. (PDF 30Â kb)
MOESM1 of Tools for translational epigenetic studies involving formalin-fixed paraffin-embedded human tissue: applying the Infinium HumanMethyation450 Beadchip assay to large population-based studies
Creators: name: Ee Wong
name: Joo, JiHoon
name: McLean, Catriona
name: Baglietto, Laura
name: English, Dallas
name: Severi, Gianluca
name: Hopper, John
name: Milne, Roger
name: FitzGerald, Liesel
name: Giles, Graham
name: Southey, Melissa
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 1: Figure S1. Performance of HM450K sample-independent control probes for failed and a subset of successful samples. Sample-independent control probes measured the staining (A), extension (B), target removal (C) and hybridisation (D) steps in the HM450K assay on the red and green channels. Failed samples are boxed.
Ceratolepis G. O. Sars 1883
Creators: name: Tonini, Lorena
name: Silva, Juliana Paulo Da
name: Filho, Arlindo Serpa
name: Freitas, Joelcio
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Curculionidae
Ceratolepis

description: Ceratolepis Sars, 1883
Ceratolepis G. O. Sars, 1883 was established with description of the new species Ceratolepis hamata in the family Lophogastridae (Malacostraca: Lophogastrida). However this name is preoccupied by Ceratolepis Chapuis, 1869, a genus of the family Curculionidae (Insecta: Coleoptera). In accordance with the article 60 of the International Code of Zoological Nomenclature, a replacement name is hereby proposed for Ceratolepis G. O. Sars, 1883.
description: Published as part of Tonini, Lorena, Silva, Juliana Paulo Da, Filho, Arlindo Serpa & Freitas, Joelcio, 2016, Replacement names for two preoccupied generic names in Arthropoda, pp. 125-126 in Zootaxa 4097 (1) on page 125, DOI: 10.11646/zootaxa.4097.1.7, http://zenodo.org/record/261072
Transfer Learning-based Real-time Handgun Detection
Creators: name: Elmir, Youssef
name: Laouar, Sid Ahmed
name: Hamdaoui, Larbi
Publisher: name: arXiv
Year: 2023
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Artificial Intelligence (cs.AI)
subject: Human-Computer Interaction (cs.HC)
subject: FOS: Computer and information sciences

description: Traditional surveillance systems rely on human attention, limiting their effectiveness. This study employs convolutional neural networks and transfer learning to develop a real-time computer vision system for automatic handgun detection. Comprehensive analysis of online handgun detection methods is conducted, emphasizing reducing false positives and learning time. Transfer learning is demonstrated as an effective approach. Despite technical challenges, the proposed system achieves a precision rate of 84.74%, demonstrating promising performance comparable to related works, enabling faster learning and accurate automatic handgun detection for enhanced security. This research advances security measures by reducing human monitoring dependence, showcasing the potential of transfer learning-based approaches for efficient and reliable handgun detection.
description: 16 pages, 9 figures, and 3 tables. Accepted at The Iraqi Journal of Science, issued by College of Science at University of Baghdad
MOESM2 of Simulating cyanobacterial phenotypes by integrating flux balance analysis, kinetics, and a light distribution function
Creators: name: He, Lian
name: Wu, Stephen
name: Wan, Ni
name: Reding, Adrienne
name: Yinjie Tang
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 2. Supplementary figures and tables.
Polypedilum bifurcatum Cranston 1989
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum bifurcatum

description: bifurcatum Cranston, 1989: Fauna of Saudi Arabia, 10: 227 (Polypedilum (Tripodura )).
Type locality. Oman (Tahwa near Sur).
Distribution. PA: Oman, Saudi Arabia; AF: Kenya.
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 41, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Additional file 2: of Decomposing the heterogeneity of depression at the person-, symptom-, and time-level: latent variable models versus multimode principal component analysis
Creators: name: Vos, Stijn De
name: Wardenaar, Klaas
name: Bos, Elisabeth
name: Wit, Ernst
name: Jonge, Peter De
Publisher: name: Figshare
Year: 2015
Subjects: subject: Cell Biology
subject: Molecular Biology
subject: Marine Biology
subject: 111714 Mental Health
subject: FOS: Health sciences

description: A pdf file containing the R script for the presented multiway principle component analysis. (PDF 25Â kb)
Sarsius Tonini, Silva, Filho & Freitas, 2016, nom. nov.
Creators: name: Tonini, Lorena
name: Silva, Juliana Paulo Da
name: Filho, Arlindo Serpa
name: Freitas, Joelcio
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Malacostraca
Lophogastrida
Lophogastridae
Sarsius

description: Sarsius, nom. nov.
Nomen novum pro Ceratolepis G. O. Sars 1883: 3 nec Ceratolepis Chapuis 1869: 260.
Type species, through original monotypy under Ceratolepis G. O. Sars, 1883: Ceratolepis hamata G. O. Sars 1883: 4. Included species: Sarsius hamata (G. O. Sars, 1883).
Etymology. The new name is dedicated to G. O. Sars, who described originally Ceratolepis hamata.
description: Published as part of Tonini, Lorena, Silva, Juliana Paulo Da, Filho, Arlindo Serpa & Freitas, Joelcio, 2016, Replacement names for two preoccupied generic names in Arthropoda, pp. 125-126 in Zootaxa 4097 (1) on page 125, DOI: 10.11646/zootaxa.4097.1.7, http://zenodo.org/record/261072
Polypedilum bilamella Zhang, Song, Qi & Wang, 2016, sp. n.
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum bilamella

description: bilamella sp. n.
Type locality. China, Xizang Autonomous Region, Ya’dong County, Yacheng.
Distribution. PA: China (Hubei, Gansu, Ningxia); OR: China (Shaanxi, Yunnan, Sichuan).
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 41, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
JWST and ALMA discern the assembly of structural and obscured components in a high-redshift starburst galaxy
Creators: name: Liu, Zhaoxuan
name: Silverman, John D.
name: Daddi, Emanuele
name: Puglisi, Annagrazia
name: Renzini, Alvio
name: Kalita, Boris S.
name: Kartaltepe, Jeyhan S.
name: Kashino, Daichi
name: Rodighiero, Giulia
name: Rujopakarn, Wiphu
name: Suzuki, Tomoko L.
name: Tanaka, Takumi S.
name: Valentino, Francesco
name: Andika, Irham Taufik
name: Casey, Caitlin M.
name: Faisst, Andreas
name: Franco, Maximilien
name: Gozaliasl, Ghassem
name: Gillman, Steven
name: Hayward, Christopher C.
name: Koekemoer, Anton M.
name: Kokorev, Vasily
name: Lambrides, Erini
name: Lee, Minju M.
name: Magdis, Georgios E.
name: Harish, Santosh
name: McCracken, Henry Joy
name: Rhodes, Jason
name: Shuntov, Marko
name: Ding, Xuheng
Publisher: name: arXiv
Year: 2023
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We present observations and analysis of the starburst, PACS-819, at z=1.45 ($M_*=10^{10.7}$ M$_{ \odot}$), using high-resolution ($0^{\prime \prime}.1$; 0.8 kpc) ALMA and multi-wavelength JWST images from the COSMOS-Web program. Dissimilar to HST/ACS images in the rest-frame UV, the redder NIRCam and MIRI images reveal a smooth central mass concentration and spiral-like features, atypical for such an intense starburst. Through dynamical modeling of the CO J=5--4 emission with ALMA, PACS-819 is rotation-dominated thus has a disk-like nature. However, kinematic anomalies in CO and asymmetric features in the bluer JWST bands (e.g., F150W) support a more disturbed nature likely due to interactions. The JWST imaging further enables us to map the distribution of stellar mass and dust attenuation, thus clarifying the relationships between different structural components, not discernable in the previous HST images. The CO J = 5 -- 4 and FIR dust continuum emission are co-spatial with a heavily-obscured starbursting core (<1 kpc) which is partially surrounded by much less obscured star-forming structures including a prominent arc, possibly a tidally-distorted dwarf galaxy, and a clump, either a sign of an ongoing violent disk instability or a recently accreted low-mass satellite. With spatially-resolved maps, we find a high molecular gas fraction in the central area reaching $\sim3$ ($M_{\text{gas}}$/$M_*$) and short depletion times ($M_{\text{gas}}/SFR\sim$ 120 Myrs) across the entire system. These observations provide insights into the complex nature of starbursts in the distant universe and underscore the wealth of complementary information from high-resolution observations with both ALMA and JWST.
description: 21 pages(including appendix), 13 figures, accepted by ApJ
Arboridia Zachvatkin 1946
Creators: name: Borodin, Oleg
name: Borodina, Olga
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Cicadellidae
Arboridia

description: Arboridia Zachvatkin, 1946
  Arboridia erecta (Ribaut, 1931) –  [Vilbaste, 1973; Vilbaste, 1974; Nast, 1987; Spuris, 1996b; Söderman, Gillerfors, Endrestol, 2009].
  Arboridia parvula (Boheman, 1845) –  [Nast, 1972; Vilbaste, 1973; Vilbaste, 1974; Varzinska, 1983; Nast, 1987; Spuris, 1996b; Ануфриев, Кириллова, 1998; Levins, Ziemelis, 2013; Ziemelis, 2014].
  Arboridia ribauti (Ossiannilsson, 1937) –  [Velce, 1968; Nast, 1972; Vilbaste, 1973; Vilbaste, 1974; Nast, 1987; Spuris, 1996b; Söderman, Gillerfors, Endrestol, 2009].
description: Published as part of Borodin, Oleg & Borodina, Olga, 2021, Fulgoromorpha & Cicadomorpha (Hemiptera) Of Latvia. Current State Of Study, pp. 155-184 in Acta Biologica Universitatis Daugavpiliensis 21 (2) on page 170, DOI: 10.5281/zenodo.12645231
MOESM4 of Simulating cyanobacterial phenotypes by integrating flux balance analysis, kinetics, and a light distribution function
Creators: name: He, Lian
name: Wu, Stephen
name: Wan, Ni
name: Reding, Adrienne
name: Yinjie Tang
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biophysics
subject: Biochemistry
subject: Space Science
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Molecular Biology
subject: Physiology
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 4. Matrix of fluxÂ distribution database.
Remarks on the algebraic structure of (2, 2) double forms
Creators: name: Goulart, E.
name: Ottoni, J. E.
Publisher: name: arXiv
Year: 2023
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: Mathematical Physics (math-ph)
subject: Differential Geometry (math.DG)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: We study the algebraic features of covariant tensors of valence four containing two blocks of skew indices. After a rather general treatment, we specialize ourselves to four-dimensional spacetimes and discuss several complementary aspects of these objects. In particular, we focus our attention on the corresponding invariant subspaces and generalise previous relations such as the Ruse-Lanczos identity, the Bel-Matte decomposition and the Lovelock-like quadratic identities. We conclude pointing out some possible applications of the formalism.
Allothnonius Britton 1978
Creators: name: Allsopp, Peter G.
name: Smith, Andrew B. T.
Publisher: name: Zenodo
Year: 2022
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Melolonthidae
Allothnonius

description: Allothnonius Britton, 1978
Allothnonius Britton, 1978: 38.
Type species: Allothnonius brooksi Britton, 1978, by original designation.
Diagnosis. Labial palp with terminal palpomere about as long and wide as penultimate palpomere. Terminal maxillary palpomere slender, as long as the proximal 3 palpomeres together, upper side with a shallow, dull-surfaced depression. Antenna with 10 antennomeres, club with 6–7 lamellae in male. Labrum convex, not protruding beyond face of the clypeus, with long setae. Clypeus with anterior face wide, ratio of greatest width to mid depth about 4–5:1, with numerous scattered setiferous punctures including some longer setae, upper surface broadly rounded, without an emargination. Surface of frons, pronotum, and scutellum either with long, pale-yellow, backwardly directly setae, sometimes interspersed with elongate, adpressed, white setae; or only with adpressed white setae. Elytra sometimes with a few, long setae close to the base, otherwise with minute, stout setae; lateral margin with fringe of longer, stout, brown setae. Pygidium with uniform but sparse clothing of short setae or adpressed, elongate, white scales. Thorax with long, fine setae beneath. Spurs of metatibia long (1.2 mm) and uniformly tapered to apex. Claws long and sharply curved, with a strong tooth beneath the base.
In the most recent key to Australian Melolonthini sensu lato (Weir et al. 2019), Allothnonius separates from Othnonius Olliff, 1891 at couplet 11. Allothnonius have the metatibial spurs long and uniformly tapered (short, broad and flattened in Othnonius), and have at least a few broad or elongate, adpressed, white scales or flattened, adpressed setae on the anterior faces of the prefemora and/or protibiae (setose in Othnonius).
Distribution. Known from northeastern Queensland (Einsleigh Uplands and south of Townsville) and northwestern Northern Territory in areas dominated by savannah vegetation (Fig. 18). The area south of Townsville where A. brooksi occurs is the Burdekin Gap, an area of tropical savannah and the largest dryland biogeographical barrier on Australia’s east coast (Bryant & Krosch 2016) – it separates the Wet Tropics from the moist Central Mackay Coast. Given the predominance of this vegetation type and the uniformity of climate types across the intervening area between the Queensland and Northern Territory distributions (Fig. 18), it would not be surprising if additional species were discovered. As with many other Australian Melolonthini, adults probably emerge only over a few days each year, and this has restricted collection opportunities.
description: Published as part of Allsopp, Peter G. & Smith, Andrew B. T., 2022, Australian Melolonthini (Coleoptera: Scarabaeidae: Melolonthinae): a third species of Allothnonius Britton, 1978, and notes on the other known species, pp. 475-484 in Zootaxa 5099 (4) on page 476, DOI: 10.11646/zootaxa.5099.4.3, http://zenodo.org/record/6091678
Polypedilum bispinum Zhang & Wang 2007
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum bispinum

description: bispinum Zhang & Wang, 2007: Acta Zootaxonomica Sinica, 32 (4): 787, (Polypedilum (Tripodura )).
Type locality. China, Hainan Province, Lishui County, Diaoluo Town.
Distribution. OR: China (Hainan).
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 41, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Eupelix Germar 1821
Creators: name: Borodin, Oleg
name: Borodina, Olga
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Cicadellidae
Eupelix

description: Eupelix Germar, 1821
  Eupelix cuspidata (Fabricius, 1775) –  [Данка, 1964; Velce, 1968; Nast, 1972; Velce, 1972; Danka, 1973; Vilbaste, 1973; Vilbaste, 1974; Varzinska, 1983; Nast, 1987; Spuris, 1996b; Ануфриев, Кириллова, 1998; Söderman, Spuņģis, 2008; Söderman, Gillerfors, Endrestol, 2009].
description: Published as part of Borodin, Oleg & Borodina, Olga, 2021, Fulgoromorpha & Cicadomorpha (Hemiptera) Of Latvia. Current State Of Study, pp. 155-184 in Acta Biologica Universitatis Daugavpiliensis 21 (2) on page 170, DOI: 10.5281/zenodo.12645231
MOESM2 of Tools for translational epigenetic studies involving formalin-fixed paraffin-embedded human tissue: applying the Infinium HumanMethyation450 Beadchip assay to large population-based studies
Creators: name: Ee Wong
name: Joo, JiHoon
name: McLean, Catriona
name: Baglietto, Laura
name: English, Dallas
name: Severi, Gianluca
name: Hopper, John
name: Milne, Roger
name: FitzGerald, Liesel
name: Giles, Graham
name: Southey, Melissa
Publisher: name: Figshare
Year: 2015
Subjects: subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: Pharmacology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 2: Figure S2. Performance of HM450K sample-dependent control probes for failed and a subset of successful samples. Sample-dependent control probes measured background signal levels (negative; A), efficiency of bisulfite conversion using Infinium type I (B) and type II (C) probe designs, allele-specific extension of Infinium I and II probes (specificity; D) and restoration (E) and overall assay performance (non-polymorphic; F) on the red and green channels. Failed samples are boxed.