cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
$m_b$ at $m_H$: the running bottom quark mass and the Higgs boson
Creators: name: Aparisi, Javier
name: Fuster, Juan
name: Hoang, André
name: Irles, Adrián
name: Lepenik, Christopher
name: Rodrigo, Germán
name: Spira, Michael
name: Tairafune, Seidai
name: Vos, Marcel
name: Yamamoto, Hitoshi
name: Yonamine, Ryo
Publisher: name: arXiv
Year: 2021
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: We present a new measurement of the bottom quark mass in the $\bar{MS}$ scheme at the renormalization scale of the Higgs boson mass from measurements of Higgs boson decay rates at the LHC: $m_b(m_H)= 2.60^{+0.36}_{-0.31}$ GeV. The measurement has a negligible theory uncertainty and excellent prospects to improve at the HL-LHC and a future Higgs factory. Confronting this result, and $m_b(m_b)$ from low-energy measurements and $m_b(m_Z)$ from $Z-$pole data, with the prediction of the scale evolution of the renormalization group equations, we find strong evidence for the "running" of the bottom quark mass.
description: 4 pages + 2 figures + 2 pages of supplementary material
The photon PDF determination within the xFitter framework
Creators: name: Giuli, Francesco
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The xFitter project (former HERAFitter project) is an open-source package that provides a framework for the determination of the parton distribution functions (PDFs) of the proton for many different kinds of analyses in Quantum Chromodynamics (QCD). xFitter version 2.0.0 has recently been released, and offers an expanded set of tools and options. It incorporates experimental data from a wide range of experiments including fixed-target, Tevatron, HERA, and LHC. xFitter can analyze this data up to next-to-next-to-leading-order (NNLO) in perturbation theory with a variety of theoretical calculations including numerous methodological options for carrying out PDF fits and plotting tools which help visualise the results. In this contribution, a determination of the photon PDF from fits to recent ATLAS measurements of high-mass Drell-Yan dilepton production at $\sqrt{s}$ = 8 TeV using this framework is presented. The work presented here is based on the paper published here: Eur.Phys.J. C77 (2017) no.6, 400
description: 4 pages, 4 figures, Proceedings of the EPS-HEP17 conference
String Geometry and Non-perturbative Formulation of String Theory
Creators: name: Sato, Matsuo
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: Differential Geometry (math.DG)
subject: Functional Analysis (math.FA)
subject: Symplectic Geometry (math.SG)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: We define string geometry: spaces of superstrings including the interactions, their topologies, charts, and metrics. Trajectories in asymptotic processes on a space of strings reproduce the right moduli space of the super Riemann surfaces in a target manifold. Based on the string geometry, we define Einstein-Hilbert action coupled with gauge fields, and formulate superstring theory non-perturbatively by summing over metrics and the gauge fields on the spaces of strings. This theory does not depend on backgrounds. The theory has a supersymmetry as a part of the diffeomorphisms symmetry on the superstring manifolds. We derive the all-order perturbative scattering amplitudes that possess the super moduli in type IIA, type IIB and SO(32) type I superstring theories from the single theory, by considering fluctuations around fixed backgrounds representing type IIA, type IIB and SO(32) type I perturbative vacua, respectively. The theory predicts that we can see a string if we microscopically observe not only a particle but also a point in the space-time. That is, this theory unifies particles and the space-time.
description: 92 pages, 5 figures, minor changes, references added
Handling Concurrency in Behavior Trees
Creators: name: Colledanchise, Michele
name: Natale, Lorenzo
Publisher: name: arXiv
Year: 2021
Subjects: subject: Robotics (cs.RO)
subject: FOS: Computer and information sciences

description: This paper addresses the concurrency issues affecting Behavior Trees (BTs), a popular tool to model the behaviors of autonomous agents in the video game and the robotics industry. BT designers can easily build complex behaviors composing simpler ones, which represents a key advantage of BTs. The parallel composition of BTs expresses a way to combine concurrent behaviors that has high potential, since composing pre-existing BTs in parallel results easier than composing in parallel classical control architectures, as finite state machines or teleo-reactive programs. However, BT designers rarely use such composition due to the underlying concurrency problems similar to the ones faced in concurrent programming. As a result, the parallel composition, despite its potential, finds application only in the composition of simple behaviors or where the designer can guarantee the absence of conflicts by design. In this paper, we define two new BT nodes to tackle the concurrency problems in BTs and we show how to exploit them to create predictable behaviors. In addition, we introduce measures to assess execution performance and show how different design choices affect them. We validate our approach in both simulations and the real world. Simulated experiments provide statistically significant data, whereas real-world experiments show the applicability of our method on real robots. We provided an open-source implementation of the novel BT formulation and published all the source code to reproduce the numerical examples and experiments.
description: preprint version accepted to be published in IEEE Transaction on Robotics. arXiv admin note: text overlap with arXiv:1908.01539
Spin-orbit coupled bosons in one dimension: emergent gauge field and Lifshitz transition
Creators: name: Cole, William S.
name: Lee, Junhyun
name: Mahmud, Khan W.
name: Alavirad, Yahya
name: Spielman, I. B.
name: Sau, Jay D.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Gases (cond-mat.quant-gas)
subject: FOS: Physical sciences

description: In the presence of strong spin-independent interactions and spin-orbit coupling, we show that the spinor Bose liquid confined to one spatial dimension undergoes an interaction- or density-tuned quantum phase transition similar to one theoretically proposed for itinerant magnetic solid-state systems. The order parameter describes broken $Z_2$ inversion symmetry, with the ordered phase accompanied by non-vanishing momentum which is generated by fluctuations of an emergent dynamical gauge field at the phase transition. This quantum phase transition has dynamical critical exponent $z \simeq 2$, typical of a Lifshitz transition, but is described by a nontrivial interacting fixed point. From direct numerical simulation of the microscopic model, we extract previously unknown critical exponents for this fixed point. Our model describes a realistic situation of 1D ultracold atoms with Raman-induced spin-orbit coupling, establishing this system as a platform for studying exotic critical behavior of the Hertz-Millis type.
description: 11 pages, 4 figures; minor revisions and updated acknowledgements
Additional file 1: of Evaluation of Communities of Practice performance developing implementation research to enhance maternal health decision-making in Mexico and Nicaragua
Creators: name: Alcalde-Rabanal, Jacqueline
name: Becerril-Montekio, Victor
name: Langlois, Etienne
Publisher: name: figshare
Year: 2018
Subjects: subject: Molecular Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: Report template for meetings with CoPs. (DOCX 14Â kb)
Two-dimensional Platinum Diselenide Waveguide-Integrated Infrared Photodetectors
Creators: name: Parhizkar, Shayan
name: Prechtl, Maximilian
name: Giesecke, Anna Lena
name: Suckow, Stephan
name: Wahl, Sophia
name: Lukas, Sebastian
name: Hartwig, Oliver
name: Negm, Nour
name: Quellmalz, Arne
name: Gylfason, Kristinn B.
name: Schall, Daniel
name: Wuttig, Matthias
name: Duesberg, Georg S.
name: Lemme, Max C.
Publisher: name: arXiv
Year: 2021
Subjects: subject: Applied Physics (physics.app-ph)
subject: Materials Science (cond-mat.mtrl-sci)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: Low cost, easily integrable photodetectors (PDs) for silicon (Si) photonics are still a bottleneck for photonic integrated circuits (PICs), especially for wavelengths above 1.8 $μ$m. Multilayered platinum diselenide (PtSe$_2$) is a semi-metallic two-dimensional (2D) material that can be synthesized below 450$°$C. We integrate PtSe$_2$ based PDs directly by conformal growth on Si waveguides. The PDs operate at 1550 nm wavelength with a maximum responsivity of 11 mA/W and response times below 8.4 $μ$s. Fourier transform infrared spectroscopy (FTIR) in the wavelength range from 1.25 $μ$m to 28 $μ$m indicates the suitability of PtSe$_2$ for PDs far into the infrared wavelength range. Our PtSe$_2$ PDs integrated by direct growth outperform PtSe$_2$ PDs manufactured by standard 2D layer transfer. The combination of IR responsivity, chemical stability, selective and conformal growth at low temperatures, and the potential for high carrier mobility, make PtSe$_2$ an attractive 2D material for optoelectronics and PICs.
description: 23 pages, 4 figures
Implications of Coordination Chemistry to Cationic Interactions in Honeycomb Layered Nickel Tellurates
Creators: name: Tada, Kohei
name: Masese, Titus
name: Kanyolo, Godwill Mbiti
Publisher: name: arXiv
Year: 2021
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Other Condensed Matter (cond-mat.other)
subject: FOS: Physical sciences

description: Honeycomb layered tellurates represent a burgeoning class of multi-functional materials with fascinating crystal-structural versatility and a rich composition space. Despite their multifold capabilities, their compositional diversity remains underexplored due to complexities in experimental design and syntheses. Thus, in a bid to expand this frontier and derive relevant insights into allowed metastable compositions, we employ a density functional theory ($\rm DFT$) approach to predict $in$ $silico$ the crystal structures of new honeycomb layered tellurates embodied by the composition, $A\rm_2 Ni_2TeO_6$ ($A$ = alkali, hydrogen or coinage-metal cations). Here, alkali-metal atoms with vastly larger radii than $\rm K$ ($\rm Rb$ and $\rm Cs$) are found to engender a prismatic coordination with the oxygen atoms from the honeycomb slabs whilst coinage-metal atoms ($\rm Ag$, $\rm Au$ and $\rm Cu$) display a propensity for linear coordination. Further, $\rm H_2 Ni_2TeO_6$ is found to also render a linear coordination wherein the hydrogen atom preferentially establishes a stronger coordination with one of the oxygen atoms to form hydroxyl groups. All $A$ cations in the studied $A\rm_2 Ni_2TeO_6$ compositions form a honeycomb lattice. Conclusions on the possibility of a monolayer-bilayer phase transition in coinage metal atom tellurates can be drawn by considering the implications of conformal symmetry of the cation honeycomb lattice and metallophilicity. This work not only propounds new honeycomb layered tellurate compositions but also provides novel insight into the rational design of multifunctional materials for applications ranging from energy storage, catalysis and optics to analogue condensed matter systems of gravity.
description: 49 pages, 10 figures, 1 cover picture, 6 supplementary tables, 13 supplementary figures
The Thin-Wall Approximation in Vacuum Decay: a Lemma
Creators: name: Brown, Adam R.
Publisher: name: arXiv
Year: 2017
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: The 'thin-wall approximation' gives a simple estimate of the decay rate of an unstable quantum field. Unfortunately, the approximation is uncontrolled. In this paper I show that there are actually two different thin-wall approximations and that they bracket the true decay rate: I prove that one is an upper bound and the other a lower bound. In the thin-wall limit, the two approximations converge. In the presence of gravity, a generalization of this lemma provides a simple sufficient condition for non-perturbative vacuum instability.
description: technically contains 2 lemmas
Two-loop Prediction of the Anomalous Magnetic Moment of the Muon in the Two-Higgs Doublet Model with GM2Calc 2
Creators: name: Athron, Peter
name: Balazs, Csaba
name: Cherchiglia, Adriano
name: Jacob, Douglas H. J.
name: Stöckinger, Dominik
name: Stöckinger-Kim, Hyejung
name: Voigt, Alexander
Publisher: name: arXiv
Year: 2021
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We present an extension of the GM2Calc software to calculate the muon anomalous magnetic moment ($a_μ^{\text{BSM}}$) in the Two-Higgs Doublet Model. The Two-Higgs Doublet Model is one of the simplest and most popular extensions of the Standard Model. It is one of the few single field extensions that can give large contributions to $a_μ^{\text{BSM}}$. It is essential to include two-loop corrections to explain the long standing discrepancy between the Standard Model prediction and the experimental measurement in the Two-Higgs Doublet Model. The new version GM2Calc 2 implements the state of the art two-loop calculation for the general, flavour violating Two-Higgs Doublet Model as well as for the flavour aligned Two-Higgs Doublet Model and the type I, II, X and Y flavour conserving variants. Input parameters can be provided in either the gauge basis or the mass basis, and we provide an easy to use SLHA-like command-line interface to specify these. Using this interface users may also select between Two-Higgs Doublet Model types and choose which contributions to apply. In addition, GM2Calc 2 also provides interfaces in C++, C, Python and Mathematica, to make it easy to interface with other codes.
description: 46 pages, 2 figures. Published version
Elastic curves and phase transitions
Creators: name: Miura, Tatsuya
Publisher: name: arXiv
Year: 2017
Subjects: subject: Classical Analysis and ODEs (math.CA)
subject: Mathematical Physics (math-ph)
subject: FOS: Mathematics
subject: FOS: Physical sciences
subject: 49Q10, 53A04

description: This paper is devoted to classical variational problems for planar elastic curves of clamped endpoints, so-called Euler's elastica problem. We investigate a straightening limit that means enlarging the distance of the endpoints, and obtain several new results concerning properties of least energy solutions. In particular we reach a first uniqueness result that assumes no symmetry. As a key ingredient we develop a foundational singular perturbation theory for the modified total squared curvature energy. It turns out that our energy has almost the same variational structure as a phase transition energy of Modica-Mortola type at the level of a first order singular limit.
description: 40 pages, 14 figures
Additional file 1 of Sputum ACE2, TMPRSS2 and FURIN gene expression in severe neutrophilic asthma
Creators: name: Kermani, Nazanin Zounemat
name: Song, Woo-Jung
name: Badi, Yusef
name: Versi, Ali
name: Guo, Yike
name: Sun, Kai
name: Bhavsar, Pank
name: Howarth, Peter
name: Dahlen, Sven-Erik
name: Sterk, Peter J.
name: Djukanovic, Ratko
name: Adcock, Ian M.
name: Chung, Kian Fan
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Immunology
subject: FOS: Clinical medicine
subject: Developmental Biology
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1: Figure S1. Comparison of sputum ACE2 gene expression levels (box-and-whisker plots showing median and interquartile range) by OCS use in asthmatics. P value was determined using unpaired t-test. Fig S2. Comparison of ACE2, TMPRSS2 and furin gene expression levels (box-and-whisker plots showing median and interquartile range) according to nasal polyps in nasal brushing. ns, not significant (p > 0.05). Table S1. Baseline characteristics of patients with asthma and healthy controls according to the site of mRNA collection. Table S2. Six asthma-associated gene sets analyzed in this study. Table S3. Absolute expression levels of ACE2, TMPRSS2 and Furin genes in different airway compartments
Systematic review of methodological studies on predictors of quality or risk of bias of systematic reviews
Creators: name: Bala, Malgorzata
name: Bado, Michal
name: Juszczyk, Albert
name: Jankowska, Karolina
name: Dziedzic, Radoslaw
name: Bilecki, Krzysztof
name: Maraj, Małgorzata
name: Storman, Dawid
name: Zając, Joanna
name: Świerz, Mateusz
name: Koperny, Magdalena
name: Peričić, Tina
Publisher: name: Open Science Framework
Year: 2022
Subjects: subject: Medicine and Health Sciences
subject: systematic review quality

description: A methodological systematic review
Table 1
Creators: name: Keller, Amy C.
name: Knaub, Leslie A.
name: Scalzo, Rebecca L.
name: Hull, Sara E.
name: Johnston, Aspen
name: Walker, Lori A.
name: Reusch, Jane E.B.
Publisher: name: figshare
Year: 2018
Subjects: Medicine

description: Metabolic parameters. Animal glucose (Control n=5, SEP n=4) and insulin (Control n=3, SEP n=4) concentrations were measured in animals with food ad libum and following a 6-hour fast.
The ASTRID simulation: the evolution of Supermassive Black Holes
Creators: name: Ni, Yueying
name: Di Matteo, Tiziana
name: Bird, Simeon
name: Croft, Rupert
name: Feng, Yu
name: Chen, Nianyi
name: Tremmel, Michael
name: DeGraf, Colin
name: Li, Yin
Publisher: name: arXiv
Year: 2021
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We present the evolution of black holes (BHs) and their relationship with their host galaxies in Astrid, a large-volume cosmological hydrodynamical simulation with box size 250 $h^{-1} \rm Mpc$ containing $2\times5500^3$ particles evolved to z=3. Astrid statistically models BH gas accretion and AGN feedback to their environments, applies a power-law distribution for BH seed mass $M_{\rm sd}$, uses a dynamical friction model for BH dynamics and executes a physical treatment of BH mergers. The BH population is broadly consistent with empirical constraints on the BH mass function, the bright end of the luminosity functions, and the time evolution of BH mass and accretion rate density. The BH mass and accretion exhibit a tight correlation with host stellar mass and star formation rate. We trace BHs seeded before z>10 down to z=3, finding that BHs carry virtually no imprint of the initial $M_{\rm sd}$ except those with the smallest $M_{\rm sd}$, where less than 50\% of them have doubled in mass. Gas accretion is the dominant channel for BH growth compared to BH mergers. With dynamical friction, Astrid predicts a significant delay for BH mergers after the first encounter of a BH pair, with a typical elapse time of about 200 Myrs. There are in total $4.5 \times 10^5$ BH mergers in Astrid at z>3, $\sim 10^3$ of which have X-ray detectable EM counterparts: a bright kpc scale dual AGN with $L_X>10^{43}$ erg/s. BHs with $M_{\rm BH} \sim 10^{7-8} M_{\odot}$ experience the most frequent mergers. Galaxies that host BH mergers are unbiased tracers of the overall $M_{\rm BH} - M_{*}$ relation. Massive ($>10^{11} M_{\odot}$) galaxies have a high occupation number (>10) of BHs, and hence host the majority of BH mergers.
description: Match the published version
QIMR_Berghofer_EGA_study_data_access_agreement_20180221_EGA_OESO.docx
Creators: name: Leonard, Conrad
name: Nic.Waddell@Qimrberghofer.Edu.Au
name: Felicity.Newell@Qimrberghofer.Edu.Au
Publisher: name: figshare
Year: 2018
Subjects: subject: Cancer
subject: 60408 Genomics
subject: FOS: Biological sciences

description: Data access agreement for EGA data policy EGAP00001000834, required for access to data from EGA study EGAS00001002864
An Investigation into Secondary School's Approach to Collaboration and Communication with their Feeder Primary Schools
Creators: name: Lowe, Helen
Publisher: name: Student Teacher Educational Research (STER)
Year: 2019

description: Helen Lowe, graduate of the Master of Education at Mary Immaculate College, writes about her dissertation research - 'An Investigation into Secondary School’s Approach to Collaboration and Communication with their Feeder Primary Schools', in volume 2 of the STER e-Journal, 2019
A $ν$ scalar in the early universe and $(g-2)_μ$
Creators: name: Liu, Jia
name: McGinnis, Navin
name: Wagner, Carlos E. M.
name: Wang, Xiao-Ping
Publisher: name: arXiv
Year: 2021
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: We investigate a concrete scenario of a light scalar with a mass around 1 MeV which can be connected to the origin of neutrino masses and simultaneously survive current bounds on relativistic degrees of freedom in the early universe. In particular we show that a feeble coupling to the Standard Model neutrinos can relax the stringent bounds on the decays to photons inferred from the measured value of $N_{\rm eff}$. Interestingly, we find that such a scalar whose diphoton coupling is generated by a tree-level coupling to the muon of similar strength as that of the Standard Model Higgs boson can simultaneously explain the long-standing discrepancy in the measured value of the muon magnetic moment. We present a possible ultraviolet completion of this scenario providing a link between new physics in the early universe and the generation of neutrino masses.
description: 8 pages, 3 figures, 1 table, matched to the published version
General Anesthesia and Brain Activity (the GABA Study)
Creators: name: Hensch, Takao K.
name: Cornelissen, Laura
name: Berde, Charles
name: Nelson, Charles A.
name: Coffman, Siobhan
name: Gabard-Durnam, Laurel Joy
Publisher: name: OSF Registries
Year: 2024
Subjects: subject: Developmental Neuroscience
subject: Anesthesiology
subject: Medicine and Health Sciences
subject: Developmental Psychology
subject: Life Sciences
subject: Medical Specialties
subject: Neuroscience and Neurobiology
subject: Social and Behavioral Sciences
subject: Psychology
subject: FOS: Psychology
subject: anesthesia
subject: critical periods
subject: infant
subject: neurodevelopment

description: The General Anesthesia and Brain Activity (GABA) study is a prospective, observational, longitudinal study begun in May 2018, as approved by the Boston Children's Hospital (BCH) IRB as Protocol P00028129. The overall aim of the GABA study is to explore associations of early, prolonged, and/or repeated general anesthetic exposures in infants during the first months of life with subsequent electrophysiological and behavioral indices of critical period development during infancy and developmental measures in early childhood.
How Well Does Kohn-Sham Regularizer Work for Weakly Correlated Systems?
Creators: name: Kalita, Bhupalee
name: Pederson, Ryan
name: Chen, Jielun
name: Li, Li
name: Burke, Kieron
Publisher: name: arXiv
Year: 2021
Subjects: subject: Chemical Physics (physics.chem-ph)
subject: Machine Learning (cs.LG)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: Kohn-Sham regularizer (KSR) is a differentiable machine learning approach to finding the exchange-correlation functional in Kohn-Sham density functional theory (DFT) that works for strongly correlated systems. Here we test KSR for weak correlation. We propose spin-adapted KSR (sKSR) with trainable local, semilocal, and nonlocal approximations found by minimizing density and total energy loss. We assess the atoms-to-molecules generalizability by training on one-dimensional (1D) H, He, Li, Be, Be$^{++}$ and testing on 1D hydrogen chains, LiH, BeH$_2$, and helium hydride complexes. The generalization error from our semilocal approximation is comparable to other differentiable approaches, but our nonlocal functional outperforms any existing machine learning functionals, predicting ground-state energies of test systems with a mean absolute error of 2.7 milli-Hartrees.
Testing the susceptibility of kiwifruit (Actinida chinensis var. deliciosa) germplasm to Hemiberlesia lataniae
Creators: name: M. Garry Hill
name: Zhuang, Qi Guo
name: Mauchline, Nicola A.
name: Sutherland, Paul W.
name: Stannard, Kate A.
name: Popowski, Elizabeth
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Hematology
subject: Plant Biology
subject: 60506 Virology

description: This study demonstrates resistance in Actinidia chinensis var. deliciosa germplasm to the armoured scale insect Hemiberlesia lataniae, an important pest of kiwifruit in New Zealand. A bioassay was used to test the resistance of 120 vines from a germplasm collection in New Zealand. Fourteen of the vines were classified as resistant and five as moderately resistant. Eight crosses (two Susceptible (S) × Resistant (R); 1 R×S; 4 R×R; 1 S×S) were made from the original vines, and the resulting families examined for resistance. There were large differences in insect survival and size between the families. Three families from R×R parents and one from R×S parents had vines showing a hypersensitive-type response (plant cell death) to H. lataniae. There were large differences in the range of susceptibility to H. lataniae within families, suggesting that the trait is polygenic or that more than one resistance mechanism is present in the germplasm.
Topological superconductivity on the honeycomb lattice: Effect of normal state topology
Creators: name: Wolf, Sebastian
name: Gardener, Tyler
name: Hur, Karyn Le
name: Rachel, Stephan
Publisher: name: arXiv
Year: 2021
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: The search for topological superconductors is one of the most pressing and challenging questions in condensed matter and material research. Despite some early suggestions that doping a topological insulator might be a successful recipe to find topological superconductors, until today there is no general understanding of the relationship of the topology of the superconductor and the topology of its underlying normal state system. One of the major obstacles is the strong effect of the Fermi surface and its subsequent pairing tendencies within the Hubbard model framework, usually preventing a detailed comparison between different topological superconducting systems. Here we present an analysis of doped insulators - topological and trivial - where the dominant Fermi surface effects have been equalized. Our approach allows us to study and compare superconducting instabilities of different normal state systems and present rigorous results about the influence of the normal state system's topology.
description: 5+11 pages, 4+5 figures
Multi-polaron solutions, nonlocal effects and internal modes in a nonlinear chain
Creators: name: Bondarenko, N.
name: Eriksson, O.
name: Skorodumova, N. V.
name: Pereiro, M.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Other Condensed Matter (cond-mat.other)
subject: Mathematical Physics (math-ph)
subject: Pattern Formation and Solitons (nlin.PS)
subject: FOS: Physical sciences

description: Multipolaron solutions were studied in the framework of the Holstein one-dimensional molecular crystal model. The study was performed in the continuous limit where the crystal model maps into the nonlinear Schrödinger equation for which a new periodic dnoidal solution was found for the multipolaron system. In addition, the stability of the multi-polaron solutions was examined, and it was found that cnoidal and dnoidal solutions stabilize in different ranges of the parameter space. Moreover, the model was studied under the influence of nonlocal effects and the polaronic dynamics was described in terms of internal solitonic modes.
description: 5 pages, 2 figures and Supplementary information
Efficient generation of propagation-invariant spatially-stationary partially coherent fields
Creators: name: Aarav, Shaurya
name: Bhattacharjee, Abhinandan
name: Wanare, Harshawardhan
name: Jha, Anand K.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: We propose and demonstrate a novel method for generating propagation-invariant spatially-stationary fields in a controllable manner. Our method relies on producing incoherent mixtures of plane waves using planar primary sources that are spatially completely uncorrelated. The strengths of the individual plane waves in the mixture decide the exact functional form of the generated coherence function. We use LEDs as the primary incoherent sources and experimentally demonstrate the effectiveness of our method by generating several spatially-stationary fields, including a new type, which we refer to as the "region-wise spatially-stationary field." We also experimentally demonstrate the propagation-invariance of these fields, which is an extremely interesting and useful property of such fields. Our work should have important implications for applications that exploit the spatial coherence properties either in a transverse plane or in a propagation-invariant manner, such as correlation holography, wide-field OCT, and imaging through turbulence.
Efficient Quantum Algorithms for State Measurement and Linear Algebra Applications
Creators: name: Patel, Apoorva
name: Priyadarsini, Anjani
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We present an algorithm for measurement of $k$-local operators in a quantum state, which scales logarithmically both in the system size and the output accuracy. The key ingredients of the algorithm are a digital representation of the quantum state, and a decomposition of the measurement operator in a basis of operators with known discrete spectra. We then show how this algorithm can be combined with (a) Hamiltonian evolution to make quantum simulations efficient, (b) the Newton-Raphson method based solution of matrix inverse to efficiently solve linear simultaneous equations, and (c) Chebyshev expansion of matrix exponentials to efficiently evaluate thermal expectation values. The general strategy may be useful in solving many other linear algebra problems efficiently.
description: 17 pages, 3 figures (v2) Sections reorganised, several clarifications added, results unchanged
A new calibration method for charm jet identification validated with proton-proton collision events at $\sqrt{s}$ = 13 TeV
Creators: name: CMS Collaboration
Publisher: name: arXiv
Year: 2021
Subjects: subject: High Energy Physics - Experiment (hep-ex)
subject: FOS: Physical sciences

description: Many measurements at the LHC require efficient identification of heavy-flavour jets, i.e. jets originating from bottom (b) or charm (c) quarks. An overview of the algorithms used to identify c jets is described and a novel method to calibrate them is presented. This new method adjusts the entire distributions of the outputs obtained when the algorithms are applied to jets of different flavours. It is based on an iterative approach exploiting three distinct control regions that are enriched with either b jets, c jets, or light-flavour and gluon jets. Results are presented in the form of correction factors evaluated using proton-proton collision data with an integrated luminosity of 41.5 fb$^{-1}$ at $\sqrt{s}$ = 13 TeV, collected by the CMS experiment in 2017. The closure of the method is tested by applying the measured correction factors on simulated data sets and checking the agreement between the adjusted simulation and collision data. Furthermore, a validation is performed by testing the method on pseudodata, which emulate different miscalibration conditions. The calibrated results enable the use of the full distributions of heavy-flavour identification algorithm outputs, e.g. as inputs to machine-learning models. Thus, they are expected to increase the sensitivity of future physics analyses.
description: Replaced with the published version. Added the journal reference and the DOI. All the figures and tables can be found at http://cms-results.web.cern.ch/cms-results/public-results/publications/BTV-20-001 (CMS Public Pages)
Additional file 1 of Metabolic classification of bladder cancer based on multi-omics integrated analysis to predict patient prognosis and treatment response
Creators: name: Tang, Chaozhi
name: Yu, Meng
name: Ma, Jiakang
name: Zhu, Yuyan
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Physiology
subject: Pharmacology
subject: Environmental Sciences not elsewhere classified
subject: Biological Sciences not elsewhere classified
subject: Cancer
subject: Computational Biology

description: Additional file 1: Figure S1. Heatmap of clustering of bladder cancer in TCGA cohort for different subtype numbers (k = 2–6) with NMF.
Admissible perturbations of a generalized Langford system
Creators: name: Musafirov, Eduard
name: Grin, Alexander
name: Pranevich, Andrei
Publisher: name: arXiv
Year: 2021
Subjects: subject: Classical Analysis and ODEs (math.CA)
subject: FOS: Mathematics
subject: 34C25, 34C41, 34C28

description: Admissible perturbations (i.e., perturbations that do not change the Mironenko reflecting function of the system) are obtained for an autonomous three-dimensional quadratic generalized Langford system with five parameters. The obtained non-autonomous perturbed systems retain many of the qualitative properties of solutions of the original system. In particular, the instability (in the sense of Lyapunov) of the equilibrium point, the presence of a periodic solution and its asymptotic stability (instability) are proved for perturbed systems. The presence of similar chaotic attractors in the original and perturbed systems is shown by numerical simulation.
description: 12 pages, 2 figures. To be published in International Journal of Bifurcation and Chaos
A simpler description of the $κ$-topologies on the spaces $\mathscr{D}_{L^p}$, $L^p$, $\mathscr{M}^1$
Creators: name: Bargetz, Christian
name: Nigsch, Eduard A.
name: Ortner, Norbert
Publisher: name: arXiv
Year: 2017
Subjects: subject: Functional Analysis (math.FA)
subject: FOS: Mathematics

description: The $κ$-topologies on the spaces $\mathscr{D}_{L^p}$, $L^p$ and $\mathscr{M}^1$ are defined by a neighbourhood basis consisting of polars of absolutely convex and compact subsets of their (pre-)dual spaces. In many cases it is more convenient to work with a description of the topology by means of a family of semi-norms defined by multiplication and/or convolution with functions and by classical norms. We give such families of semi-norms generating the $κ$-topologies on the above spaces of functions and measures defined by integrability properties. In addition, we present a sequence-space representation of the spaces $\mathscr{D}_{L^p}$ equipped with the $κ$-topology, which complements a result of J.~Bonet and M.~Maestre. As a byproduct, we give a characterisation of the compact subsets of the spaces $\mathscr{D}'_{L^p}$, $L^p$ and $\mathscr{M}^1$.
description: 21 pages; Corrected the proof of Proposition 10 (4)
Hemispatial neglect, electroencephalographic correlates and the effect of short wavelength light on spatial inattention
Creators: name: MEGAN HOLLY O'NEILL
Publisher: name: Monash University
Year: 2019
Subjects: Neuroscience and Physiological Psychology

description: Hemispatial neglect is a common and disabling neurological syndrome defined as the inability to detect, respond to, and orient towards stimuli contralateral to cerebral damage. Despite decades of research, the disorder is not well understood and the underlying physiology that influences the behavioural phenotype remains unclear. This lack of understanding has hampered the development of effective rehabilitation strategies. One perspective that could provide useful insights is that of perceptual decision-making. We investigated how perceptual decision-making and specifically the neural correlates associated with orienting of attention and evidence accumulation are affected by healthy aging and in patients with neglect.
Additional file 12 of Metabolome and transcriptome analysis reveals the molecular profiles underlying the ginseng response to rusty root symptoms
Creators: name: Bian, Xingbo
name: Zhao, Yan
name: Xiao, Shengyuan
name: Yang, He
name: Han, Yongzhong
name: Zhang, Lianxue
Publisher: name: figshare
Year: 2021
Subjects: subject: Plant Biology
subject: FOS: Biological sciences

description: Additional file 12: Figure S5. The plant-pathogen interaction pathway.
Anomalous Rabi oscillations in multilevel quantum systems
Creators: name: Chang, B. Y.
name: Sola, I. R.
name: Malinovsky, Vladimir S.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: We show that the excitation probability of a state within a manifold of levels undergoes Rabi oscillations with frequency determined by the energy difference between the states and not by the pulse area for sufficiently strong pulses. The observed dynamics can be used as a procedure for robust state preparation as an alternative to adiabatic passage and as a useful spectroscopic method.
description: 9 pages, 3 figures
Outer Automorphism Anomalies
Creators: name: Henning, Brian
name: Lu, Xiaochuan
name: Melia, Tom
name: Murayama, Hitoshi
Publisher: name: arXiv
Year: 2021
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: We discuss anomalies associated with outer automorphisms in gauge theories based on classical groups, namely charge conjugations for $SU(N)$ and parities for $SO(2r)$. We emphasize the inequivalence (yet related by a flavor transformation) between two versions of charge conjugation for $SU(2k)$, $SO(2r)$, and $E_6$ symmetries. The subgroups that commute with the outer automorphisms are identified. Some charge conjugations can lead to a paradox, which is resolved by the observation that they are anomalous and hence not symmetries. We then discuss anomaly matching conditions that involve the charge conjugations or parities. Interesting examples are given where the charge conjugation is spontaneously broken.
description: v2: 40 pages, 5 figures, 14 tables, additional references. Matches version published in JHEP
Additional file 2 of Metabolome and transcriptome analysis reveals the molecular profiles underlying the ginseng response to rusty root symptoms
Creators: name: Bian, Xingbo
name: Zhao, Yan
name: Xiao, Shengyuan
name: Yang, He
name: Han, Yongzhong
name: Zhang, Lianxue
Publisher: name: figshare
Year: 2021
Subjects: subject: Plant Biology
subject: FOS: Biological sciences

description: Additional file 2: Table S2. Gene Ontology results of all the enriched terms for the upregulated mRNAs in GRS tissues.
Proton pairing in neutron stars from chiral effective field theory
Creators: name: Lim, Yeunhwan
name: Holt, Jeremy W.
Publisher: name: arXiv
Year: 2017
Subjects: subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We study the ${}^{1}S_0$ proton pairing gap in beta-equilibrated neutron star matter within the framework of chiral effective field theory. We focus on the role of three-body forces, which strongly modify the effective proton-proton spin-singlet interaction in dense matter. We find that three-body forces generically reduce both the size of the pairing gap and the maximum density at which proton pairing may occur. The pairing gap is computed within BCS theory, and model uncertainties are estimated by varying the nuclear potential and the choice of single-particle spectrum in the gap equation. We find that a second-order perturbative treatment of the single-particle spectrum suppresses the proton ${}^{1}S_0$ pairing gap relative to the use of a free spectrum. We estimate the critical temperature for the onset of proton superconductivity to be $T_c = (3.7 - 6.0)\times 10^{9} $ K, which is consistent with previous theoretical results in the literature and marginally within the range deduced from a recent Bayesian analysis of neutron star cooling observations.
description: 8 pages, 9 figures
Portable Stimulator for Group Housing and Water-Maze Use
Creators: name: Hofmann, Ulrich G.
Publisher: name: figshare
Year: 2018
Subjects: subject: 90303 Biomedical Instrumentation
subject: FOS: Medical engineering
subject: Neuroscience

description: This file set contains the design files and instructions for building a miniature portable deep-brain stimulator for animal use.
 This device combines a miniature PCB assembly with 3D-printing, and can be utilised in both group-housing and water-maze environments.
Radiation hydrodynamics modeling of kilonovae with SNEC
Creators: name: Wu, Zhenyu
name: Ricigliano, Giacomo
name: Kashyap, Rahul
name: Perego, Albino
name: Radice, David
Publisher: name: arXiv
Year: 2021
Subjects: subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: We develop a method to compute synthetic kilonova light curves that combines numerical relativity simulations of neutron star mergers and the $\texttt{SNEC}$ radiation-hydrodynamics code. We describe our implementation of initial and boundary conditions, r-process heating, and opacities for kilonova simulations. We validate our approach by carefully checking that energy conservation is satisfied and by comparing the $\texttt{SNEC}$ results with those of two semi-analytic light curve models. We apply our code to the calculation of color light curves for three binaries having different mass ratios (equal and unequal mass) and different merger outcome (short-lived and long-lived remnants). We study the sensitivity of our results to hydrodynamic effects, nuclear physics uncertainties in the heating rates, and duration of the merger simulations. We find that hydrodynamics effects are typically negligible and that homologous expansion is a good approximation in most cases. However, pressure forces can amplify the impact of uncertainties in the radioactive heating rates. We also study the impact of shocks possibly launched into the outflows by a relativistic jet. None of our models match AT2017gfo, the kilonova in GW170817. This points to possible deficiencies in our merger simulations and kilonova models which neglect non-LTE effects and possible additional energy injection from the merger remnant, and to the need to go beyond the assumption of spherical symmetry adopted in this work.
Compressive three-dimensional super-resolution microscopy with speckle-saturated fluorescence excitation
Creators: name: Pascucci, Marco
name: Ganesan, Sivaramankrishna
name: Tripathy, Aditya
name: Katz, Ori
name: Emiliani, Valentina
name: Guillon, Marc
Publisher: name: arXiv
Year: 2017
Subjects: subject: Optics (physics.optics)
subject: Biological Physics (physics.bio-ph)
subject: FOS: Physical sciences

description: Nonlinear structured illumination microscopy (nSIM) is an effective approach for super-resolution wide-field fluorescence microscopy with a theoretically unlimited resolution. In nSIM, carefully designed, highly-contrasted illumination patterns are combined with the saturation of an optical transition to enable sub-diffraction imaging. While the technique proved useful for two-dimensional imaging, extending it to three-dimensions (3D) is challenging due to the fading/fatigue of organic fluorophores under intense cycling conditions. Here, we present a compressed sensing approach that allows for the first time 3D sub-diffraction nSIM of cultured cells by saturating fluorescence excitation. Exploiting the natural orthogonality of transverse speckle illumination planes, 3D probing of the sample is achieved by a single two-dimensional scan. Fluorescence contrast under saturated excitation is ensured by the inherent high density of intensity minima associated with optical vortices in polarized speckle patterns. Compressed speckle microscopy is thus a simple approach that enables 3D super-resolved nSIM imaging with potentially considerably reduced acquisition time and photobleaching.les fast 3D super-resolved imaging with considerably minimized photo-bleaching.
En torno a la perturbación1 del objeto de la Psicopedagogía: tensiones analítico-metodológicas
Creators: name: González, Aldo Ocampo
Publisher: name: Zenodo
Year: 2020

description: Quisiera inaugurar este capítulo afirmando que, la Psicopedagogía a pesar de constituir un campo con muchos años de tradición, ha sido incapaz de resolver el problema epistemológico y metodológico que la atraviesa. Esto se traduce en la ausencia de una construcción y de dispositivos de consolidación de una epistemología y teoría, que permitan comprender la autenticidad de la naturaleza de su conocimiento, de su estructura teórica y de la singularidad y especificidad de su método de investigación, capaz de transformar la formación de sus profesionales y sus prácticas investigativas. La escasa claridad sobre su objeto y método, explicitan un conjunto de repercusiones significativas en la formación de sus profesionales, producto de la fragmentación y los sistemas exclusionarios de las disciplinas por las que éste objeto se moviliza. ¿Qué sucede entonces con la formación de sus profesionales e investigadores? A nivel mundial, la tendencia ha sido al cierre progresivo de titulaciones de pre y postgrado, así como, de sus departamentos –muchos de ellos, fusionados al interior de marcos institucionales con denominación en Ciencias de la Educación, Métodos de Investigación y Diagnóstico en Educación, Psicología Evolutiva, Didáctica y Organización Escolar, Ciencias Sociales, etc. –, los que no siempre reflejan una sólida política de ubicuidad producto de la complejidad que afecta a dicho sintagma. Sólo en Argentina la Psicopedagogía ha sido objeto de departamentalización autónoma en la interioridad de las estructuras académicas hegemónicas. Este, sin duda, reafirma un problema de aproximación a su fenómeno y de carencia2 de un método claro y preciso que permita aproximarse comprensiblemente al estudio de su objeto –intersticial y fronterizo–.