cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Aleochara (Xenochara) quadrata Sharp
Creators: name: Klimaszewski, Jan
name: Webster, Reginald P.
name: Brunke, Adam
Publisher: name: Zenodo
Year: 2017
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Staphylinidae
Aleochara
Aleochara quadrata

description: Aleochara (Xenochara) quadrata Sharp
(Fig. 10 d, and 82, 79, 321, 322, in Klimaszewski 1984)
 Aleochara quadrata Sharp, 1883: 149. Klimaszewski 1984, Klimaszewski and Cervenka 1986, Majka and Klimaszewski 2008.
 Diagnosis. This species may be distinguished by the following combination of characters: body dark brown, disc of pronotum as dark as or only slightly paler than head, elytra paler than remainder of the body with darkened basal area; meshed microsculpture of forebody absent or weak and broken in many places.
 Male: median lobe of aedeagus with apical half of tubus sinuate in lateral view, apex of tubus bent ventrad, subapical sclerites of internal sac of about equal width throughout its length and with apices not upturned (Fig. 10 d).
 Remarks. This species is sympatric with western populations of A. castaneipennis but has not yet been taken with it in the same collection event. Generally, A. quadrata is much darker and the pronotum is glossier. Males of A. quadrata can be reliably distinguished from A. castaneipennis by the sinuate apical half of the tubus and subapical sclerites of the internal sac, which are not upturned (Fig. 10d. Aleochara quadrata is extremely similar to the Palaearctic species A. moerens Gyllenhal but can be distinguished by its subapical sclerite which does not gradually narrow to a point in A. moerens (Fig. 10 e). The latter species is not yet known from the Nearctic region.
 Distribution. Origin: Nearctic. Canada: BC. USA: CA, NV, OR, WA. Mexico.
This species is newly reported from Washington and Oregon based on the following material: Oregon, Clackamas Co., Camp Creek Cmpgr., 2.8 mi SE Rhododendron, A. & D. Smetana (CNC) 10 specimens; Upper Applegate Rd. (CNC) 1 specimen. Washington, 6 mi E Joyce, 12.V.1968, Campbell and Smetana (CNC) 22 specimens, Olympic Nat. Pk., Hoh Ranger Sta., 600′, 13.V.1968 (CNC) 15 specimens
These records link the previously isolated records from BC (Klimaszewski and Cervenka 1986; Majka and Klimaszewski 2008 [claimed to be the first record for BC and Canada]) with those much farther south.
 Collection and habitat data. Nothing specific is known about the collection circumstances of this species. The collecting period includes: V, VII, VIII.
description: Published as part of Klimaszewski, Jan, Webster, Reginald P. & Brunke, Adam, 2017, A new cryptic species of Aleochara Gravenhorst associated with Marmota monax (Linnaeus) burrows and caves in North America (Coleoptera: Staphylinidae: Aleocharinae), pp. 1-11 in Insecta Mundi 2017 (600) on page 6, DOI: 10.5281/zenodo.5169964
Constraints on Lorentz Invariance Violating Quantum Gravity and Large Extra Dimensions Models using High Energy Gamma Ray Observations
Creators: name: Stecker, F. W.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Astrophysics (astro-ph)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Observations of the multi-TeV spectra of the nearby BL objects Mkn 421 and Mkn 501 exhibit the high energy cutoffs predicted to be the result of intergalactic annihilation interactions, primarily with infrared photons having a flux level as determined by various astronomical observations. After correction for this absorption effect, the derived intrinsic spectra of these multi-TeV sources can be explained within the framework of simple synchrotron self-Compton emission models. Stecker and Glashow have shown that the existence of such annihilations via electron-positron pair production interactions up to an energy of 20 TeV puts strong constraints on Lorentz invariance violation. Such constraints have important implications for Lorentz invariance violating (LIV) quantum gravity models as well as LIV models involving large extra dimensions. We also discuss the implications of observations of high energy gamma-rays from the Crab Nebula on constraining quantum gravity models.
description: Accepted for publication in Astroparticle Physics, nine pages, ref. to loop quantum gravity removed
Verifying Tree Ensembles by Reasoning about Potential Instances
Creators: name: Devos, Laurens
name: Meert, Wannes
name: Davis, Jesse
Publisher: name: arXiv
Year: 2020
Subjects: subject: Machine Learning (cs.LG)
subject: Artificial Intelligence (cs.AI)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: Imagine being able to ask questions to a black box model such as "Which adversarial examples exist?", "Does a specific attribute have a disproportionate effect on the model's prediction?" or "What kind of predictions could possibly be made for a partially described example?" This last question is particularly important if your partial description does not correspond to any observed example in your data, as it provides insight into how the model will extrapolate to unseen data. These capabilities would be extremely helpful as they would allow a user to better understand the model's behavior, particularly as it relates to issues such as robustness, fairness, and bias. In this paper, we propose such an approach for an ensemble of trees. Since, in general, this task is intractable we present a strategy that (1) can prune part of the input space given the question asked to simplify the problem; and (2) follows a divide and conquer approach that is incremental and can always return some answers and indicates which parts of the input domains are still uncertain. The usefulness of our approach is shown on a diverse set of use cases.
description: Devos, Laurens, Wannes Meert, and Jesse Davis. "Verifying tree ensembles by reasoning about potential instances." Proceedings of the 2021 SIAM International Conference on Data Mining (SDM). Society for Industrial and Applied Mathematics, 2021
MOESM3 of A genome-skimmed phylogeny of a widespread bryozoan family, Adeonidae
Creators: name: Orr, Russell
name: Haugen, Marianne
name: BjÃ¶Rn Berning
name: Bock, Philip
name: Cumming, Robyn
name: Florence, Wayne
name: Hirose, Masato
name: Martino, Emanuela Di
name: Ramsfjell, Mali
name: Sannum, Maja
name: Smith, Abigail
name: Vieira, Leandro
name: Waeschenbach, Andrea
name: Liow, Lee Hsiang
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Evolutionary Biology
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Plant Biology

description: Additional file 3. Scanning Electron Micrographs (SEMs) of dried samples.
Additional file 2 of Estrogen receptor β represses Akt signaling in breast cancer cells via downregulation of HER2/HER3 and upregulation of PTEN: implications for tamoxifen sensitivity
Creators: name: Lindberg, Karolina
name: Helguero, Luisa A
name: Omoto, Yoko
name: Jan-Åke Gustafsson
name: Lars-Arne Haldosén
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: Plant Biology

description: Additional file 2: Effects of the ERα-selective ligand PPT on expression of HER2 and HER3. T47-DERβ cells were treated for 4 days with 10 ng/mL (-ERβ) or 0.01 ng/mL (+ERβ) doxycycline, in the presence or absence of 10 nM 4,4¶,400-(4-propyl-[1H]-pyrazole-1,3,5-triyl)trisphenol (PPT). Lysates were analyzed by immunoblotting. (PDF 450 KB)
Shocked molecular hydrogen towards the Tornado nebula
Creators: name: Lazendic, J. S.
name: Wardle, M.
name: Burton, M. G.
name: Yusef-Zadeh, F.
name: Green, A. J.
name: Whiteoak, J. B.
Publisher: name: arXiv
Year: 2004
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We present near-infrared and millimetre-line observations of the Tornado nebula (G357.7-0.1). We detected 2.12 micron_m H2 1-0 S(1) line emission towards the suspected site of interaction with a molecular cloud revealed by the presence of an OH(1720 MHz) maser. The distribution of the H2 emission is well correlated with the nonthermal radio continuum emission from the Tornado, and the velocity of the H2 emission spans over 100 km/s, which both imply that the H2 emission is shock excited. We also detected millimetre-lines from 12CO and 13CO transitions at the velocity of the maser, and mapped the distribution of the molecular cloud in a 2 x 2 arcmin^2 region around the maser. The peak of the molecular cloud aligns well with an indentation in the nebula's radio continuum distribution, suggesting that the nebula's shock is being decelerated at this location, which is consistent with the presence of the OH(1720 MHz) maser and shocked H2 emission at that location.
description: 10 pages, 8 figures, minor changes, accepted to MNRAS
Tetragonoderus (Peronoscelis) Chaudoir
Creators: name: Shpeley, Danny
name: Ball, George E.
Publisher: name: Zenodo
Year: 2008
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Coleoptera
Carabidae
Tetragonoderus

description: Key to Western Hemisphere genera of long-spurred lebiomorphs, and species groups of subgenus Peronoscelis Chaudoir (modified from Ball and Shpeley 2002: 274)
 1. Labial mentum toothed. Tibial spurs of middle and hind legs fimbriate (Ball 1983: 523, cf. Fig. 6K-L). Mandible basally with dorsolateral and ventrolateral margins in line, or explanate, with lateroventral margin distinctly laterad laterodorsal margin................................................... 2
 - Labial mentum edentate. Tibial spurs with lateral margins smooth, not fimbriate. Mandible with laterodorsal margin extended laterad ventrolateral margin........................................................................................................................................... Tribe Masoreini,  Anaulacus MacLeay
 2(1). Head posteriad eyes constricted in form of narrow neck. Tarsal claws prominently pectinate. Mandible basally explanate, lateroventral margin extended distinctly laterad dorsolateral margin........................................................................................ Tribe Lebiini,  Nemotarsus LeConte
 - Head posteriad eyes not constricted in form of narrow neck. Tarsal claws smooth, or with very short denticulations. Mandible not explanate, laterodorsal and lateroventral margins in line................................................ Tribe Cyclosomini, Tetragonoderus (Peronoscelis Chaudoir) 3
 3(2). Pronotum with posterior margin bisinuate medially. Labial paraglossae not connected apically by a transligular membrane................................................................ figuratus species group - Pronotum with posterior margin approximately straight. Paraglossae joined apically by a transligular membrane............................................................... intersectus species group
description: Published as part of Shpeley, Danny & Ball, George E., 2008, Taxonomic review of the Neotropical Tetragonoderus quadriguttatus assemblage (Coleoptera: Carabidae: Cyclosomini) with description of T. deuvei, new species, and new West Indian and Nearctic locality records, pp. 1-16 in Insecta Mundi 2008 (50) on page 5, DOI: 10.5281/zenodo.5169980
X-ray Absorption Near Edge Structure of FePt nanoclusters
Creators: name: Alam, Sher
name: Ahmed, J.
name: Matsui, Y.
Publisher: name: arXiv
Year: 2004
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: X-ray Absorption Near Edge Structure [XANES] of FePt nanoclusters has been studied using a full multiple scattering, self-consistent field [SCF], real-space Green`s function approach realized via the powerful ab initio FEFF8 code. One purpose of our study is to determine the sensitivity of Pt L3 edge with respect to the size and shape of the FePt nanoclusters. We also give the results of the calculations with respect to the Fe L3 edge. Calculations are made with and without core-hole for two main reasons, to check and cross-check the FEFF code and also since in some cases it is known such as Pt clusters that better results are obtained without the core-hole. This is mainly because the screening electron will occupy empty d or f states and correspondingly reduce the white line intensity.
description: TeX version 3.14159, LaTex2e, 6 pages with 6 figures
Compressed Sensing MRI With Variable Density Averaging (CS-VDA) Outperforms Full Sampling At Low SNR
Creators: name: Schoormans, Jasper
name: Strijkers, Gustav J.
name: Hansen, Anders C.
name: Nederveen, Aart J.
name: Coolen, Bram F.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Medical Physics (physics.med-ph)
subject: Image and Video Processing (eess.IV)
subject: FOS: Physical sciences
subject: FOS: Electrical engineering, electronic engineering, information engineering

description: We investigated whether a combination of k-space undersampling and variable density averaging enhances image quality for low-SNR MRI acquisitions. We implemented 3D Cartesian k-space prospective undersampling with a variable number of averages for each k-line. The performance of this compressed sensing with variable-density averaging (CS-VDA) method was evaluated in retrospective analysis of fully sampled phantom MRI measurements, as well as for prospectively accelerated in vivo 3D brain and knee MRI scans. Both phantom and in vivo results showed that acquisitions using the CS-VDA approach resulted in better image quality as compared to full sampling of k-space in the same scan time. Specifically, CS-VDA with a higher number of averages in the center of k-space resulted in the best image quality, apparent from increased anatomical detail with preserved soft-tissue contrast. This novel approach will facilitate improved image quality of inherently low SNR data, such as those with high-resolution or specific contrast-weightings with low SNR efficiency.
description: 11 pages, 9 figures
The impact of alpha/Fe enhanced stellar evolutionary tracks on the ages of elliptical galaxies
Creators: name: Thomas, Daniel
name: Maraston, Claudia
Publisher: name: arXiv
Year: 2003
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We complement our study of alpha/Fe enhanced stellar population models of Lick absorption indices (Thomas et al. 2003) by comparing two sets of alpha/Fe enhanced models. In both models the impact on Lick indices due to alpha/Fe enhancement is accounted for through a modification of the stellar absorption line-strengths using the response functions of Tripicco & Bell (1995). One set of models, however, uses solar-scaled, the other alpha/Fe enhanced stellar evolutionary tracks. Since the alpha/Fe enhanced tracks are hotter than the solar-scaled ones (Salasnich et al. 2000), the correspondent stellar population models have slightly weaker metallic indices (i.e. Mgb, etc.) and stronger Balmer line indices (Hbeta) (Maraston et al 2003). Here we explore quantitatively the impact of this effect on the alpha/Fe ratios, metallicities and ages that are derived for elliptical galaxies. We find that the modest decrease of the metallic indices Mgb and balance each other, such that fully consistent alpha/Fe ratios are derived for stellar systems using alpha/Fe enhanced models with either solar-scaled or alpha/Fe enhanced stellar tracks. The decrease of the metallic indices and the increase of Hbeta conspire in a way that also consistent metallicities are obtained. The derived ages, instead, are significantly different. The inclusion of alpha/Fe enhanced stellar tracks leads to the derivation of ages as high as 30 Gyr for elliptical galaxies. For the same objects, ages not older than 15 Gyr are obtained, if alpha/Fe enhanced models using solar-scaled tracks are adopted. This may indicate that current stellar evolutionary models overestimate the bluing of stellar evolutionary tracks due to alpha/Fe enhanced chemical mixtures at super-solar metallicities.
description: 5 pages, 2 figures. Accepted by A&A
Evolution of gravitational waves in Randall-Sundrum cosmology
Creators: name: Easther, Richard
name: Langlois, David
name: Maartens, Roy
name: Wands, David
Publisher: name: arXiv
Year: 2003
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: We investigate the evolution of gravitational wave perturbations about a brane cosmology embedded in a five-dimensional anti-de Sitter bulk. During slow-roll inflation in a Randall-Sundrum brane-world, the zero mode of the 5-dimensional graviton is generated, while the massive modes remain in their vacuum state. When the zero mode re-enters the Hubble radius during radiation domination, massive modes are generated. We show that modes decouple in the low-energy/near-brane limit and develop perturbative techniques to calculate the mode-mixing at finite energy.
description: 7 pages, latex with revtex
Cerium as a possible stabilizer of ThMn$_{12}$-type iron-based compounds: A first-principles study
Creators: name: Harashima, Yosuke
name: Fukazawa, Taro
name: Miyake, Takashi
Publisher: name: arXiv
Year: 2019
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: The structural stability of CeFe$_{12}$ is investigated by using first-principles calculation. The formation energies of CeFe$_{12}$ relative to the Ce$_{2}$Fe$_{17}$ + bcc-Fe phase and to the CeFe$_{2}$ + bcc-Fe phase are calculated with the assumptions of trivalency and tetravalency for Ce. Those values are compared with corresponding results in $R$Fe$_{12}$ for $R=$ Nd, Sm, and Zr. Our results suggest that the tetravalent Ce is a promising stabilizer of the ThMn$_{12}$ structure. We also show that the stabilizing effect of an element depends as much on the valency as on the size of the $R$ element by investigating $R$Fe$_{12}$ where $R$ is assumed to have a hypothetical valency on the basis of first-principles calculation.
description: 5pages, 4figures
MOESM1 of Impact of human papillomavirus (HPV) self-collection on subsequent cervical cancer screening completion among under-screened US women: MyBodyMyTest-3 protocol for a randomized controlled trial
Creators: name: Spees, Lisa
name: Marais, Andrea Des
name: Wheeler, Stephanie
name: Hudgens, Michael
name: Doughty, Sarah
name: Brewer, Noel
name: Smith, Jennifer
Publisher: name: figshare
Year: 2019
Subjects: subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer

description: Additional file 1: Appendix 1. Self-test results delivery and screening invitation: intervention group script. Appendix 2. Consent form.
Leptogenesis in Neutrino Textures with Two Zeros
Creators: name: Kaneko, Satoru
name: Katsumata, Makoto
name: Tanimoto, Morimitsu
Publisher: name: arXiv
Year: 2003
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: The leptogenesis is studied in the neutrino textures with two zeros, which reduce the number of independent phases of the CP violation. The phenomenological favored neutrino textures with two zeros are decomposed into the Dirac neutrino mass matrix and the right-handed Majorana one in the see-saw mechanism. Putting the condition to suppress the $μ\to eγ$ decay enough, the texture zeros of the Dirac neutrino mass matrix are fixed in the framework of the MSSM with right-handed neutrinos. These textures have only one CP violatig phase. The magnitude of each entry of the Dirac mass matrix is determined in order to explain the baryon asymmetry of the universe by solving the Boltzman equations. The relation between the leptogenesis and the low energy CP violation is presented in these textures.
description: Latex file with 20 pages, 6 eps figures
About the S^3 Group-manifold Reduction of Einstein Gravity
Creators: name: Linares, Roman
Publisher: name: arXiv
Year: 2004
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We exhibit a new consistent group-manifold reduction of pure Einstein gravity in the vielbein formulation when the compactification group manifold is S^3. The novel feature in the reduction is to exploit the two 3-dimensional Lie algebras that S^3 admits. The first algebra is introduced into the group-manifold reduction in the standard way through the Maurer-Cartan 1-forms associated to the symmetry of the general coordinate transformations. The second algebra is associated to the linear adjoint group and it is introduced into the group-manifold reduction through a local transformation in the internal tangent space. We discuss the characteristics of the resulting lower-dimensional theory and we emphasize the novel results generated by the new group-manifold reduction. As an application of the reduction we show that the lower-dimensional theory admits a domain wall solution which upon uplifting to the higher-dimension results to be the self-dual (in the non-vanishing components of both curvature and spin connection) Kaluza-Klein monopole. This discussion may be relevant in the dimensional reductions of M-theory, string theory and also in the Bianchi cosmologies in four dimensions.
description: 20 pages, v2: reference added, v3: discussion clarified, minor mistakes corrected, title changed
Invariance property in scattering media and absorption
Creators: name: Tommasi, Federico
name: Fini, Lorenzo
name: Martelli, Fabrizio
name: Cavalieri, Stefano
Publisher: name: arXiv
Year: 2019
Subjects: subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: In this paper we deal with the influence on absorption of the diffusive media characteristics framing the problem in connection with the invariance property (IP) of the mean path length. We show that the IP is an important issue that regulates but not prevent the search of absorption maximization by scattering characteristics. We find that the scattering may increase the absorption or even be detrimental, depending on the geometry of the medium and the conditions of its illumination.
MOESM1 of Associations between indoor environmental quality in schools and symptom reporting in pupil-administered questionnaires
Creators: name: Savelieva, Kateryna
name: Marttila, Tero
name: Lampi, Jussi
name: Ung-Lanki, Sari
name: Elovainio, Marko
name: Pekkanen, Juha
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: Medicine
subject: Genetics
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: Hematology
subject: Plant Biology

description: Additional file 1: Table S1. Response rate of parents and pupils in questionnaire survey. Table S2. Prevalence estimates and rank correlation matrix between IEQ indicators. Table S3. Model fit statistics for latent class analysis models with 1 to 5 classes. Table S4. Separate IEQ indicators and respiratory symptoms: primary school pupils. Table S5. Separate IEQ indicators and general symptoms: primary school pupils. Table S6. Seaparate IEQ indicators and lower respiratory symptoms: primary school pupils. Table S7. Separate IEQ indicators and eye symptoms: primary school pupils. Table S8. Separate IEQ indicators and skin symptoms: primary school pupils. Table S9. Separate IEQ indicators and respiratory symptoms: secondary school pupils. Table S10. Separate IEQ indicators and general symptoms: secondary school pupils. Table S11. Separate IEQ indicators and lower respiratory symptoms: secondary school pupils. Table S12. Separate IEQ indicators and eye symptoms: secondary school pupils. Table S13. Separate IEQ indicators and skin symptoms: secondary school pupils. Table S14. Associations between summary score and latent classes of IEQ and symptoms: parents of primary school pupils. Table S15. Separate IEQ indicators and respiratory symptoms: parents of primary school pupils. Table S16. Separate IEQ indicators and general symptoms: parents of primary school pupils. Table S17. Separate IEQ indicators and lower respiratory symptoms: parents of primary school pupils. Table S18. Separate IEQ indicators and eye symptoms: parents of primary school pupils. Table S19. Separate IEQ indicators and skin symptoms: parents of primary school pupils. Table S20. Benjamini-Hochberg test of false discovery rate. Table S21. Odds ratios and 95% confidence intervals for associations between IEQ and symptoms of primary school pupils. Table S22. Odds ratios and 95% confidence intervals for the associations between IEQ and symptoms of secondary school pupils. Figure S1. Flowchart describing the selection of school buildings and participants.
Additional file 3 of Estrogen receptor β represses Akt signaling in breast cancer cells via downregulation of HER2/HER3 and upregulation of PTEN: implications for tamoxifen sensitivity
Creators: name: Lindberg, Karolina
name: Helguero, Luisa A
name: Omoto, Yoko
name: Jan-Åke Gustafsson
name: Lars-Arne Haldosén
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: Plant Biology

description: Additional file 3: Influence of different ER ligands on ERβ effects on HRG-β1-stimulated signaling. T47-DERβ cells were treated for 4 days with 10 ng/mL (-ERβ) or 0.01 ng/mL (+ERβ) doxycycline in the presence or absence of 10 nM DPN, 10 nM 7-bromo-2-(4-hydroxyphenyl)-1,3-benzoxazol-5-ol (WAY) or 10 nM 17β-estradiol (E2) and thereafter were stimulated for 30 minutes with 10 ng/mL heregulin-β1 (HRG-β1). Lysates were analyzed by immunoblotting. (PDF 2 MB)
Additional file 4 of Estrogen receptor β represses Akt signaling in breast cancer cells via downregulation of HER2/HER3 and upregulation of PTEN: implications for tamoxifen sensitivity
Creators: name: Lindberg, Karolina
name: Helguero, Luisa A
name: Omoto, Yoko
name: Jan-Åke Gustafsson
name: Lars-Arne Haldosén
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: Plant Biology

description: Additional file 4: ERβ effects on PTEN protein expression using different ER selective ligands. T47-DERβ cells were treated for 4 days with 10 ng/mL (-ERβ) or 0.01 ng/mL (+ERβ) doxycycline in the presence or absence of 10 nM DPN, 10 nM WAY or 10 nM E2. Lysates were analyzed by immunoblotting. PTEN, phosphatase and tensin homologue deleted on chromosome 10. (PDF 255 KB)
Pricing and Policy Problems in the Northeast Fluid Milk Industry
Creators: name: Cotterill, Ronald
name: Cotterill, Ronald
Publisher: name: Unknown
Year: 2006
Subjects: subject: Demand and Price Analysis
subject: market power
subject: bargaining
subject: over-order premiums
subject: fair share pricing

description: This article documents the need for reform of milk pricing in the Northeast. The New York price gouging law can be recast as a fair share law. This new milk policy “kills two birds with one stone.” It corrects regional inequities in raw milk pricing by reforming the pricing of milk at retail by limiting and redistributing excessive retail margins to farmers and consumers. The fair share policy relieves allocative price inefficiency, improves the performance of the federal milk market order pool, and the general performance of the Northeast dairy farming and fluid milk industries.
Competition Effects of Supermarket Services
Creators: name: Bonanno, Alessandro
name: Lopez, Rigoberto
name: Bonanno, Alessandro
name: Lopez, Rigoberto
Publisher: name: Unknown
Year: 2007
Subjects: subject: Demand and Price Analysis
subject: Marketing
subject: FOS: Economics and business
subject: retailing
subject: service
subject: pricing
subject: milk
subject: market power
subject: competition

description: This article investigates the competition effects of supermarket food and non-food services using fluid milk as a case study. A simultaneous equation model for services and price competition is estimated with scanner data from 16 supermarket chains operating in six U.S. cities. Empirical results show that a greater scope of services results in higher retail cost, greater supermarket chain-level demand but lower price elasticity, and enhanced market power, all leading to higher milk prices and quantity of milk sold. However, unlike previous research, we conclude that increases in cost rather than market power explain most of the ensuing price increases.
Evolution and control of the DUO1 regulatory network in land plants
Creators: name: Kamal, Siti Nur Aishah Mohd
Publisher: name: University of Leicester
Year: 2022
Subjects: Uncategorized

description: The sexual reproduction of land plants depends on the successful production and union of male and female gametes. The production of functional sperm cells involves the control of germ cell division and differentiation. These factors are dependent upon a key regulatory module formed by the MYB transcription factor DUO1 POLLEN 1 (DUO1), and DUO1-ACTIVATED ZINC FINGER 1 / DUO1-ACTIVATED ZINC FINGER 2 (DAZ1/DAZ2), C2H2 zinc finger proteins. The major aim of this thesis is to further understand the DUO1 network in land plants. The work is aligned as two separate strands, one in angiosperms and the other in bryophytes. DAZ3 and its homolog, DAZ3L, are direct target genes of DUO1. The evolution and potential function of DAZ3 and DAZ3L in Arabidopsis sperm cell development was investigated. Phylogenetic analysis showed that DAZ3 and DAZ3L are restricted to the eudicots superrosid-superasterid clade and most likely evolved from ancestral DAZ1 sequences. The analysis of Arabidopsis knockout mutants showed that neither DAZ3 nor DAZ3L have essential functions in sperm cell development, fertilisation or seed development. The function of DUO1 in the model bryophyte Physcomitrella patens (moss) was also investigated. The absence of DUO1 in moss was shown to prevent the differentiation of spermatogenous cells. This resulted in a lack of flagella, rendering spermatogenous cells immotile, hence knockout mutants lacking DUO1 function were infertile. The potential conservation of the DUO1-DAZ1 network in moss was also analysed based on in silico analysis of expression data and the presence of DUO1 binding sites (DBS). The similarity in transcript profiles between PpDUO1 and PpDAZ1 in maturing antheridia and the presence of DUO1 binding sites in the PpDAZ1 upstream region indicate that PpDAZ1 is a direct target of PpDUO1. Hence, it is plausible that the wider DUO1-DAZ1 network is conserved in bryophytes.
The CoCo-Beholder: Enabling Comprehensive Evaluation of Congestion Control Algorithms
Creators: name: Khasina, Evgeniya
Publisher: name: arXiv
Year: 2019
Subjects: subject: Networking and Internet Architecture (cs.NI)
subject: FOS: Computer and information sciences
subject: C.2.1

description: The recent endeavors of the research community to unite efforts on the design and evaluation of congestion control algorithms have created a growing collection of congestion control schemes called Pantheon. However, the virtual network emulator that comes with the collection has very limited capabilities: it can run flows of only one scheme at once, and the flows cannot have individual network settings, as the topology is point-to-point. This thesis addresses those limitations and presents CoCo-Beholder, a human-friendly emulator providing the popular dumbbell topology of any size, each link of which may have individual rate, delay, and queue size. The central link of the topology may also have a variable delay with optional jitter. Flows of different schemes may run between the halves of the topology at once, and for each flow, the direction and starting time can be chosen. CoCo-Beholder's reliability is ensured by testing schemes in the dumbbell topology of size one and comparing the results against those of Pantheon emulator. With CoCo-Beholder, the thesis successfully reproduces experiments from a recent paper that evaluated the fairness and RTT-fairness of schemes using a real hardware dumbbell testbed. Finally, the thesis explores the behavior of schemes under the square-wave delay using CoCo-Beholder's variable delay feature.
description: Master's Thesis. Advisors: Prof. Dr. Anja Feldmann, Dr. Corinna Coupette. In total: 142 pages, 65 figures, 34 tables, 23 listings. CoCo-Beholder is available at https://www.mpi-inf.mpg.de/inet/software/coco-beholder
Estimation and Inference in Parametric Stochastic Frontier Models: A SAS/IML Procedure for a Bootstrap Method
Creators: name: Tchumtchoua, Sylvie
name: Tchumtchoua, Sylvie
Publisher: name: Unknown
Year: 2006
Subjects: Productivity Analysis
Research Methods/ Statistical Methods

description: Parametric Stochastic Frontier Models are widely used in productivity analysis and are commonly estimated using FRONTIER, STATA or LIMDEP packages, which only provide point estimates for firm-specific technical efficiency. Confidence intervals for technical efficiencies with superior coverage properties than those offered by the Horrace and Schmidt (1996) method may be computed using the Bootstrap method introduced by Simar and Wilson (2005). To facilitate these calculations, we propose a SAS/IML procedure, which computes these confidence intervals for stochastic frontier models with or without inefficiency effects. We apply the program to estimating supermarket-specific technical efficiency in the U.S. Results indicates that the program works very well and produce narrower confidence intervals than those obtain using Horrace and Schmidt (1996) method.
MOESM1 of A genome-skimmed phylogeny of a widespread bryozoan family, Adeonidae
Creators: name: Orr, Russell
name: Haugen, Marianne
name: Berning, Björn
name: Bock, Philip
name: Cumming, Robyn
name: Florence, Wayne
name: Hirose, Masato
name: Martino, Emanuela Di
name: Ramsfjell, Mali
name: Sannum, Maja
name: Smith, Abigail
name: Vieira, Leandro
name: Waeschenbach, Andrea
name: Liow, Lee Hsiang
Publisher: name: figshare
Year: 2019
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Pharmacology
subject: Evolutionary Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: Hematology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology
subject: 60506 Virology

description: Additional file 1: Supporting Figures for Orr et al. Genome skimming the bryozoan tree: lessons from a widespread family, Adeonidae. Figure S1. The phylogeny of adeonids based on two nuclear rRNA genes. Maximum likelihood topology of 35 adeonid ingroup taxa with 5478 nucleotide characters inferred using RAxML. The numbers on the internal nodes are ML bootstrap values (RAxML). The scale bare represents substitutions per site. Figure S2. The phylogeny of adeonids based on 15 mitochondrial genes. Maximum likelihood topology of 35 adeonid ingroup taxa with 5053 nucleotide and amino acid characters inferred using RAxML. The numbers on the internal nodes are ML bootstrap values (RAxML). The scale bare represents substitutions per site. Figure S3. The phylogeny of adeonids based on 17 genes. Maximum likelihood topology of 35 adeonid ingroup taxa and eight outgroup taxa with 10,259 nucleotide and amino acid characters inferred using RAxML. The numbers on the internal nodes are ML bootstrap values (RAxML). Note that data from the outgroup taxa are from NCBI (see Additional file 2: Table S1). The scale bare represents substitutions per site. Figure S4. Adeonid sequence identity for three barcode regions: The topology is identical to that depicted in Fig. 1. The figure shows the inferred adeonid ingroup phylogeny with clustering at varying levels of sequence identity using Cd-hit. 18 s V4 region (99, 98 and 97% cluster identity) in blue, 28 s D1-D2 regions (99, 97 and 90% cluster identity) in yellow, and cox1 in (99 and 83% cluster identity) green. The coloured bars represent the taxa that clustered together at the varying identities, with dots indicating taxa that remained as solitary clusters. The scale bare represents substitutions per site.
Additional file 5 of Estrogen receptor β represses Akt signaling in breast cancer cells via downregulation of HER2/HER3 and upregulation of PTEN: implications for tamoxifen sensitivity
Creators: name: Lindberg, Karolina
name: Helguero, Luisa A
name: Omoto, Yoko
name: Jan-Åke Gustafsson
name: Lars-Arne Haldosén
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: Plant Biology

description: Additional file 5: Influence of ER antagonists on ERβ effects on PTEN protein expression. T47-DERβ cells were treated for 4 days with 10 ng/mL (-ERβ) or 0.01 ng/mL (+ERβ) doxycycline in the presence or absence of 10 nM DPN, 100 nM 4-OH-T or 100 nM ICI 182, 789 (ICI). Lysates were analyzed by immunoblotting. Densitometric scanning of three immunoblots is shown. (PDF 20 KB)
Análise dos Aspectos Sociais e Produtivos da Mamona com vistas a Produção do Biodiesel: um estudo de caso.
Creators: name: Sousa, Jose Wellington
name: Maia, Pamela Caroline
name: Mayorga, Maria Irles De Oliveira
name: Sousa, Jose Wellington
name: Maia, Pamela Caroline
name: Mayorga, Maria Irles De Oliveira
Publisher: name: Unknown
Year: 2006
Subjects: Resource /Energy Economics and Policy

description: A mamoneira é uma cultura industrial explorada em função do óleo contido em suas sementes. No Brasil, a região nordeste se destaca como potencial produtora de biodiesel de mamona, podendo utilizar-se desta alternativa para incluir no processo pequenos agricultores desprovidos de alternativas rentáveis. O objetivo deste trabalho foi analisar os aspectos sociais e produtivos da Mamona com vistas a Produção do Biodiesel nos municípios de Crateús e Novo Oriente no Estado do Ceará. Os municípios foram escolhidos para o estudo devido os mesmos serem indicados, segundo o zoneamento feito pela EMBRAPA. Foram utilizados dados primários e secundários. Nos municípios estudados prevalecem os produtores donos de suas terras, assentados e rendeiros. Os produtores na sua maioria não utilizam o fogo, mobilizam o solo, não adubam, realizam capinas, não fazem pós-colheita e recebem assistência técnica. Grande parte dos mesmos é associado, recebem incentivo à produção, mas não melhoraram sua renda. Dos filhos de produtores com idade escolar quase 100% freqüenta a escola. As produtividades obtidas pelos produtores ficou bem abaixo da esperada, principalmente em Crateús. Palavras chaves: mamona, biodiesel
Tree-Particle-Mesh: an adaptive, efficient, and parallel code for collisionless cosmological simulation
Creators: name: Bode, Paul
name: Ostriker, Jeremiah P.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: An improved implementation of an N-body code for simulating collisionless cosmological dynamics is presented. TPM (Tree-Particle-Mesh) combines the PM method on large scales with a tree code to handle particle-particle interactions at small separations. After the global PM forces are calculated, spatially distinct regions above a given density contrast are located; the tree code calculates the gravitational interactions inside these denser objects at higher spatial and temporal resolution. The new implementation includes individual particle time steps within trees, an improved treatment of tidal forces on trees, new criteria for higher force resolution and choice of time step, and parallel treatment of large trees. TPM is compared to P^3M and a tree code (GADGET) and is found to give equivalent results in significantly less time. The implementation is highly portable (requiring a Fortran compiler and MPI) and efficient on parallel machines. The source code can be found at http://astro.princeton.edu/~bode/TPM/
description: 29 pages, includes 12 figures; to appear in ApJS. Source code at http://astro.princeton.edu/~bode/TPM/
MOESM7 of HIF1/2-exerted control over glycolytic gene expression is not functionally relevant for glycolysis in human leukemic stem/progenitor cells
Creators: name: Wierenga, Albertus
name: Cunningham, Alan
name: Ayşegül Erdem
name: Lopera, Nuria
name: Brouwers-Vos, Annet
name: Maurien Pruis
name: Mulder, André
name: Günther, Ulrich
name: Martens, Joost
name: Vellenga, Edo
name: Schuringa, Jan
Publisher: name: figshare
Year: 2019
Subjects: subject: Biochemistry
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Physiology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: Hematology

description: Additional file 7. Supplemental Methods.
Pulsar Populations and Unidentified Gamma-Ray Sources
Creators: name: Harding, A. K.
name: Gonthier, P. L.
name: Grenier, I. A.
name: Perrot, C. A.
Publisher: name: arXiv
Year: 2003
Subjects: subject: Astrophysics (astro-ph)
subject: FOS: Physical sciences

description: The EGRET telescope on the Compton Gamma-Ray Observatory detected over 200 sources and the majority of these are still unidentified. At least three subpopulations of EGRET sources have been associated with the Galaxy: bright sources lying along the Galactic plane, weaker sources spatially correlated with the Gould Belt and a high-latitude, halo population. Many of these sources may be pulsars and there are more than two-dozen radio pulsars in or near EGRET source error boxes, most of them recently discovered in the Parkes Multibeam Survey. We present results from several population synthesis studies of pulsars in the Galaxy, which predict the number of pulsars detected by gamma-ray and radio surveys assuming models for the high-energy emission beam and its relation to the radio beam. Future gamma-ray pulsar detections by AGILE and GLAST together with the recent large rise in the radio pulsar population will give greatly improved statistics. The relative numbers of radio and gamma-ray pulsars detected in the plane and in the Gould Belt populations will provide an important discriminator between models of high-energy emission and will profoundly affect the numbers and birth rate of pulsars in the Galaxy.
description: 6 Pages, 3 Figures, to be published in proceedings of 34th COSPAR Scientific Assembly, Symposium on Supernova Remnants and Neutron Stars
Additional file 6 of Estrogen receptor β represses Akt signaling in breast cancer cells via downregulation of HER2/HER3 and upregulation of PTEN: implications for tamoxifen sensitivity
Creators: name: Lindberg, Karolina
name: Helguero, Luisa A
name: Omoto, Yoko
name: Jan-Åke Gustafsson
name: Lars-Arne Haldosén
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy
subject: Plant Biology

description: Authors’ original file for figure 1
Condition monitoring and fault diagnosis of wind turbine: a systematic literature review
Creators: name: Hussain, Musavir
name: Mirjat, Nayyar Hussain
name: Shaikh, Faheemullah
name: Dhirani, Lubna Luxmi
name: Kumar, Laveet
name: K. Sleiti, Ahmad
Publisher: name: University of Limerick
Year: 2025
Subjects: classificationCode: 40
subject: Engineering

description: Wind energy penetration has considerably increased in the recent past. However, wind turbines are often prone to various faults which may lead to failures causing huge production and economic losses with increased downtime. To reduce this production and economic loss. It is therefore clear that early detection of these failures can be achieved through an appropriate condition monitoring approach. Various approaches are reported for predicting the condition of wind turbines. However, deploying a costly condition monitoring system with additional data accusation devices poses a challenge for windfarm owners. To address this challenge this study employing Preferred Reporting Item for Systematic Literature Review and Meta Analysis (PRISMA) provides a detailed review of various approaches used for the wind turbine condition monitoring. The key objective of this study is to find out the most frequently used and reliable method of wind turbine condition monitoring, focusing particularly on the SCADA-based approach due to its practical advantages and widespread adoption in the industry. Additionally, this review considers the distinctive concept of machine learning model building which includes data input and its processing, feature selection, model building and its evaluation to analyze the research issues. The review findings concluded that amongst various condition monitoring techniques, SCADA based data driven approach is most popular as it does not require additional sensors, blade mount cameras, unmanned arial vehicles and a separate data accusation unit. Nevertheless, condition monitoring results based on SCADA approach to provide varying predications for differently located wind farms which is a pertinent knowledge gap. This review study provides some detailed insight into various condition monitoring approaches of wind turbines and recommendation to consider any of these based on available resources.