cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Meri undefined-1
Creators: name: Murcia-Moreno, Daniel
name: Gálvez, Dumas
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Sparassidae
Meri
Meri undefined-1

description: Meri sp. 1
Materials
Type status: Other material. Occurrence: recordedBy: Daniel Murcia & Dumas Galvez; sex: 1 immature; occurrenceID: 044D18F7-C0EE-53A9-B00B-D13E035BB3A2; Location: country: Panama; locality: Coiba; verbatimLocality: Playa Hermosa; verbatimCoordinates: 7 ° 30 ' 53.708 '' N 81 ° 52 ' 0.411 '' O; Event: eventDate: 25-03 - 22
description: Published as part of Murcia-Moreno, Daniel & Gálvez, Dumas, 2024, Preliminary checklist of spiders (Araneae) from Coiba National Park, Panama, pp. e 117642 in Biodiversity Data Journal 12 on page e117642, DOI: 10.3897/BDJ.12.e117642
Conditions for degradability of tripartite quantum states
Creators: name: Fung, Chi-Hang Fred
name: Li, Chi-Kwong
name: Sze, Nung-Sing
name: Chau, H. F.
Publisher: name: arXiv
Year: 2013
Subjects: subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: Alice, Bob, and Eve share a pure quantum state. We introduce the notion of state degradability by asking whether the joint density of Alice and Eve can be transformed to the joint density of Alice and Bob by processing Eve's part through a quantum channel, in order words, degrading Eve. We prove necessary and sufficient conditions for state degradability and provide an efficient method to quickly rule out degradability for a given state. The problem of determining degradability of states is different from that of quantum channels, although the notion is similar. One application of state degradability is that it can be used to test channel degradability. In particular, the degradability of the output state of a channel obtained from the maximally entangled input state gives information about the degradability of the channel.
description: 20 pages, no figure
Instruct-ULTRA D7.2 Standardised workflows for integrative sample preparation methods for structural biology in cells
Creators: name: Hart, Darren
name: Poterszman, Arnaud
name: van Ingen, Hugo
name: Boisbouvier, Jerome
name: Luchinat, Enrico
Publisher: name: Zenodo
Year: 2020

description: Performing structural studies in a cellular context provides a view and understanding of proteins that cannot be obtained on purified samples in simple aqueous environments. Interactions with cellular partners can be measured in the crowded, natural cellular environment that strongly influences the dynamics, affinities and kinetics of proteins and their interactions. Proteins also span a spectrum of foldedness, from well-folded to intrinsically disordered, and these states are also affected strongly by the cellular milieu. In the first NMR-focused part of this work package, partner P12 (CIRMMP) developed and optimise d an NMR bioreactor system to standardise the workflow of real-time in-cell NMR applications. Different configurations were tested for supporting human cells in biocompatible hydrogels. A workflow was optimised, allowing up to ~72 hours of NMR experiments with high cell viability, and applied to observe real-time protein-ligand interactions. P10 (CNRS Grenoble) extended the field of application of in-cell NMR to large proteins (a challenging area for NMR) using 13CH3 specific isotopic labelling. They successfully demonstrated this strategy on an 82 kDa target in bacterial cells and developed new 13CH3-labelling protocols to extend its application to eukaryotic cells at the limit of this method. P13 (UU) also developed labelling approaches, for parallel investigations of macromolecular complexes involving intrinsically disordered proteins, by NMR and small angle scattering (SAS) in vitro and for studies of these complexes by in-cell NMR. They established a workflow permitting collection, from the same sample, of both local structural information by NMR and overall shape information (demonstrated on a 120 kDa IDP-complex). This was further extended to interactions of IDPs by in-cell NMR.In the second focus of this work package, P10 (CNRS Strasbourg) established a workflow based on an in-cell CRISPR/Cas9 methodology. The methodology permits purification of macromolecular complexes directly from endogenous sources, and labelling of individual proteins and macromolecular complexes with fluorescent reporter tags for imaging applications in both electron and light microscopy.
Wiedomys Hershkovitz 1959
Creators: name: Musser, Guy G.
name: Carleton, Michael D.
Publisher: name: Zenodo
Year: 1993
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Muridae
Wiedomys

description: Wiedomys Hershkovitz, 1959. Proc. Biol. Soc. Washington, 72:5. TYPE SPECIES: Mus pyrrhorhinos Wied-Neuwied, 1821. COMMENTS: Wiedomyine, a tribe formally diagnosed by Reig (1980) to contain the problematic form pyrrhorhinos, which has been variously classified as a species of Oryzomys or Thomasomys (see Tate, 1932/; Osgood, 1933d; and Hershkovitz, 1959b), and a new fossil genus, Cholomys, recovered from E Argentina.
description: Published as part of Guy G. Musser & Michael D. Carleton, 1993, Order Rodentia - Family Muridae, pp. 501-755 in Mammal Species of the World (2 nd Edition), Washington and London :Smithsonian Institution Press on page 751, DOI: 10.5281/zenodo.7353098
description: {"references": ["Osgood, W. H. 1933 d. The generic position of Mus pyrrhorhinus Wied. Journal of Mammalogy, 14: 370 - 371.", "Hershkovitz, P. 1959 b. Two new genera of South American rodents. Proceedings of the Biological Society of Washington, 72: 5 - 10."]}
Wiedomys pyrrhorhinos
Creators: name: Musser, Guy G.
name: Carleton, Michael D.
Publisher: name: Zenodo
Year: 1993
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Muridae
Wiedomys
Wiedomys pyrrhorhinos

description: Wiedomys pyrrhorhinos (Wied-Neuwied, 1821). Reise nach Brasilien, 2:177. TYPE LOCALITY: Brazil, Bahia, caatingas along the Riacho da Ressaca, between the farms Tamboril and Ilha (as clarified by Avila-Pires, 1965). DISTRIBUTION: SE Brazil from Ceara to Rio Grande do Sul. COMMENTS: Locality records clarified by Pine (1980b).
description: Published as part of Guy G. Musser & Michael D. Carleton, 1993, Order Rodentia - Family Muridae, pp. 501-755 in Mammal Species of the World (2 nd Edition), Washington and London :Smithsonian Institution Press on page 751, DOI: 10.5281/zenodo.7353098
description: {"references": ["Avila-Pires, F. D., de. 1965. The type specimens of Brazilian mammals collected by Prince Maximilian zu Wied. American Museum Novitates, 2209: 1 - 21.", "Pine, R. H. 1980 b. Notes on rodents of the genera Wiedomys and Thomasomys (including Wilfredomys). Mammalia, 44: 195 - 202."]}
title: ОБРАЗОВАТЕЛЬНЫЙ ПРОЦЕСС В ЭПОХУ ПАНДЕМИИ: ВЗГЛЯД ИНОСТРАННОГО СТУДЕНТА
Creators: name: Белоус, Елена Сергеевна
name: Ромашова, Ольга Владимировна
Publisher: name: Астраханский государственный медицинский университет
Year: 2022
Subjects: subject: Educational sciences
subject: FOS: Educational sciences

description: В  статье  анализируются  результаты  анкетирования  иностранных студентов, направленного на выявление проблем и трудностей, связанных с дистанционным обучением в период пандемии. В анкетировании приняли участие студенты Волгоградского государственного   технического   университета.   На   основе   мнения   обучающихся формулируются  плюсы  и  минусы  системы  онлайн-образования,  устанавливаются  способы самосовершенствования  в  период  вынужденной  изоляции,  характеризуются  ожидания студентов,  связанные  с  новым  учебным  годом.  Рассматривается  анкетирование  как  метод эмпирического   исследования,   описываются   виды,   формы,   способы   и   функции анкетирования;   структура   и   содержание   анкеты;   устанавливаются   особенности анкетирования в иностранной аудитории.
Wilfredomys Avila-Pires 1960
Creators: name: Musser, Guy G.
name: Carleton, Michael D.
Publisher: name: Zenodo
Year: 1993
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Muridae
Wilfredomys

description: Wilfredomys Avila-Pires, 1960. Bol. Mus. Nac., Nov. Ser., Rio de Janeiro, 220:3. TYPE SPECIES: Thomasomys oenax Thomas, 1928. COMMENTS: Genus diagnosed to encompass another problematic thomasomyine species from SE Brazil; see Osgood (1933b) and Pine (1980b) for historical review of the generic affiliations of the type species. The categorical recognition of this taxon, conventionally treated as a subgenus of Thomasomys (e.g., Carleton and Musser, 1984; Corbet and Hill, 1991; Pine, 1980b), will depend on phylogenetic studies involving other thomasomyines (also see comments under Delomys).
description: Published as part of Guy G. Musser & Michael D. Carleton, 1993, Order Rodentia - Family Muridae, pp. 501-755 in Mammal Species of the World (2 nd Edition), Washington and London :Smithsonian Institution Press on page 752, DOI: 10.5281/zenodo.7353098
description: {"references": ["Osgood, W. H. 1933 b. Two new rodents from Argentina. Field Museum of Natural History, Zoological Series, 20: 11 - 14.", "Pine, R. H. 1980 b. Notes on rodents of the genera Wiedomys and Thomasomys (including Wilfredomys). Mammalia, 44: 195 - 202.", "Carleton, M. D., and G. G. Musser. 1984. Muroid rodents. Pp. 289 - 379, in Orders and families of Recent mammals of the world (S. Anderson and J. K. Jones, Jr., eds.). John Wiley and Sons, New York, 686 pp.", "Corbet, G. B., and J. E. Hill. 1991. A world list of mammalian species. Third ed. British Museum (Natural History) Publications, London, 243 pp."]}
Upconversion single photon detection near 2 um
Creators: name: Shentu, Guo-Liang
name: Xia, Xiu-Xiu
name: Sun, Qi-Chao
name: Pelc, Jason S.
name: Fejer, M. M.
name: Zhang, Qiang
name: Pan, Jian-Wei
Publisher: name: arXiv
Year: 2013
Subjects: subject: Quantum Physics (quant-ph)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: We have demonstrated upconversion detection at the single photon level in the 2 um spectral window using a pump wavelength near 1550nm, a periodically poled lithium niobate (PPLN) waveguide, and a volume Bragg grating (VBG) to reduce noise. We achieve a system photon detection efficiency of 10%, with a noise count rate of 24,500 counts per second, competitive with other 2 um single photon detection technologies. This detector has potential applications in environmental gas monitoring, life science, and classical and quantum communication.
description: 4 pages, 3 figures
Instruct-ULTRA D7.1 Standardised workflows for production, crystallisation and data collection of membrane proteins
Creators: name: Archer, Magarida
name: Athayde, Diogo
name: van den Heuvel, Joop
name: Mohan Kaipa, Jagan
name: Krasnoselska, Ganna
name: Owens, Ray
name: Rodrigues, Jose
name: Rosario, Ana L.
Publisher: name: Zenodo
Year: 2020

description: Workflows have been developed for the expression of integral membrane proteins (IMPs) in three different contexts: mammalian IMPs in human embryonic kidney cell s (expi293F™); mammalian IMPs in Trichoplusia nicells (High Five™) insect cells; and bacterial IMPs expressed in E. coli. Two common features of the workflows were cost-effective testing for expression in small culture volumes (1- 15 ml) and fusion to a fluorescent reporter protein (GFP or mCherry) to analyse expression and/or detergent solubilisation. The protocols developed for the expression of membrane proteins in human and insect cells were compared by analysing the same six targets, selected from different subcellular locations (plasma membrane, endoplasmic reticulum (ER) membrane, and Golgi apparatus membrane). The six targets were transiently transfected at small-scale into either expi293F™ or Hi5 High Five™ cells and analysis of fluorescence showed that all were expressed, though differences in the levels of protein produced were observed between the two expression cell systems. Work is on-going to purify proteins from both expression systems for subsequent structural studies by cryo-EM. The protocol for the production of bacterial membrane proteins in E. coli was exemplified by the analysis of two enzyme families from mycobacteria involved in cell wall synthesis (Arabinosyltransferase and Arabinofuranosyltransferase). The results demonstrated the critical importance of selecting homologues from multiple species and screening these for expression in parallel at small scale. Approximately 50 % of the cloned genes were expressed and from these, eight proteins were purified and structural studies initiated by cryo-electron microscopy.
Anti-cholinergic drug burden in patients with dementia increases after hospital admission: a multicentre cross-sectional study.
Creators: name: Hook, Annabelle
name: Randall, Jessica L
name: Grubb, Carla M
name: Ellis, Natalie
name: Wellington, Jack
name: Hemmad, Aayushi
name: Zerdelis, Agisilaos
name: Winnett, Andrew RD
name: Geers, Benjamin DW
name: Sykes, Bethany
name: Auty, Charlotte N
name: Vinchenzo, Cecilia
name: Thorburn, Christiane E
name: Asogbon, Daniella
name: Granger, Emily
name: Boagey, Heather
name: Raphael, Juliet
name: Patel, Kajal
name: Bhargava, Kartik
name: Dolley, Mary-Kate M
name: Maden, Matthew J
name: Shah, Mehdin M
name: Lee, Qao M
name: Vaidya, Ratnaraj
name: Sehdev, Simran
name: Barai, Sneha
name: Roche, Sophie
name: Khalid, Uzair
name: Codling, David A
name: Harrison, Judith R
Publisher: name: Apollo - University of Cambridge Repository
Year: 2022
Subjects: Research
Dementia
Alzheimer disease
Cholinesterase inhibitors
Muscarinic antagonists
Antidepressive agents
Antipsychotic agents
Cognitive dysfunction
Memory disorders
Cognition
Polypharmacy

description: BACKGROUND: Anticholinergic medications are drugs that block cholinergic transmission, either as their primary therapeutic action or as a secondary effect. Patients with dementia may be particularly sensitive to the central effects of anticholinergic drugs. Anticholinergics also antagonise the effects of the main dementia treatment, cholinesterase inhibitors. Our study aimed to investigate anticholinergic prescribing for dementia patients in UK acute hospitals before and after admission. METHODS: We included 352 patients with dementia from 17 UK hospital sites in 2019. They were all inpatients on surgical, medical or Care of the Elderly wards. Information about each patient's medications were collected using a standardised form, and the anticholinergic drug burden of each patient was calculated with an evidence-based online calculator. Wilcoxon's rank test was used to look at the correlation between two subgroups upon admission and discharge. RESULTS: On admission to hospital, 37.8% of patients had an anticholinergic burden score ≥ 1 and 5.68% ≥3. On discharge, 43.2% of patients with an anticholinergic burden score ≥ 1 and 9.1% ≥3. The increase in scores was statistically significant (p = 0.001). Psychotropics were the most common group of anticholinergic medications prescribed at discharge. Of those patients taking cholinesterase inhibitors, 44.9% were also prescribed anticholinergic medications. CONCLUSIONS: Our cross-sectional, multicentre study found that people with dementia are commonly prescribed anticholinergic medications, even if concurrently taking cholinesterase inhibitors, and are significantly more likely to be discharged from hospital with a higher anticholinergic burden than on admission.
Meri undefined-2
Creators: name: Murcia-Moreno, Daniel
name: Gálvez, Dumas
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Sparassidae
Meri
Meri undefined-2

description: Meri sp. 2
Materials
Type status: Other material. Occurrence: recordedBy: Daniel Murcia & Dumas Galvez; sex: 1 immature; occurrenceID: 271F2E10-3EBF-53A4-A7B4-54DFEC086B0D; Location: country: Panama; locality: Coiba; verbatimLocality: Isla Canales Afuera; verbatimCoordinates: 7 ° 41 ' 15.77 '' N 81 ° 37 ' 47.539 '' O; Event: eventDate: 30-01 - 22
Type status: Other material. Occurrence: recordedBy: Daniel Murcia & Dumas Galvez; sex: 2 immature; occurrenceID: 437F1135-0BF4-5973-922E-1206974BE511; Location: country: Panama; locality: Coiba; verbatimLocality: Sendero Los Monos; verbatimCoordinates: 7 ° 36 ' 2.891 '' N 81 ° 43 ' 35.187 '' O; Event: eventDate: 19-10 - 22
description: Published as part of Murcia-Moreno, Daniel & Gálvez, Dumas, 2024, Preliminary checklist of spiders (Araneae) from Coiba National Park, Panama, pp. e 117642 in Biodiversity Data Journal 12 on page e117642, DOI: 10.3897/BDJ.12.e117642
Nolavia undefined-1
Creators: name: Murcia-Moreno, Daniel
name: Gálvez, Dumas
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Sparassidae
Nolavia
Nolavia undefined-1

description: Nolavia sp. 1
Materials
Type status: Other material. Occurrence: recordedBy: Daniel Murcia & Dumas Galvez; sex: 1 female; occurrenceID: 7C9C285D-EC17-5F4F-9904-39F890330BF4; Location: country: Panama; locality: Coiba; verbatimLocality: Est. MiAmbiente Principal; verbatimCoordinates: 7 ° 37 ' 37.024 '' N 81 ° 43 ' 46.56 '' O; Event: eventDate: 29-01 - 22
description: Published as part of Murcia-Moreno, Daniel & Gálvez, Dumas, 2024, Preliminary checklist of spiders (Araneae) from Coiba National Park, Panama, pp. e 117642 in Biodiversity Data Journal 12 on page e117642, DOI: 10.3897/BDJ.12.e117642
Instruct-ULTRA D6.3 Publication of a position paper on the operation of NMR services and RIs in general as a guide for users in collaboration with WP3
Creators: name: Banci, Lucia
name: Boelens, Rolf
name: Morelli, Francesca
name: Pierattelli, Roberta
name: Wienk, Hans
Publisher: name: Zenodo
Year: 2020

description: This deliverable reports the results of an NMR European landscape analysis carried out in the frame of the activities of the Instruct-Ultra project. The aim is to present to the broad scientific community the opportunities offered in Europe to access NMR facilities and expertise. “The biological NMR open access landscape” chapter, together with the map of “Location of European RIs offering biological NMR access to external parties” summarising NMR access opportunities at European scale, is intended to be a continuously updated guide specifically addressing non expert users, wishing to exploit the use of this technology in their research. For this, it is being made available via the Instruct-ERIC (www.structuralbiology.eu)andthe EuroBioNMR EEIG (www.eurobionmr.eu) websites, and it will be published in the Zenodo data repository.
Piecewise linear approximations of the standard normal first order loss function
Creators: name: Rossi, Roberto
name: Tarim, S. Armagan
name: Prestwich, Steven
name: Hnich, Brahim
Publisher: name: arXiv
Year: 2013
Subjects: subject: Optimization and Control (math.OC)
subject: Probability (math.PR)
subject: FOS: Mathematics

description: The first order loss function and its complementary function are extensively used in practical settings. When the random variable of interest is normally distributed, the first order loss function can be easily expressed in terms of the standard normal cumulative distribution and probability density function. However, the standard normal cumulative distribution does not admit a closed form solution and cannot be easily linearised. Several works in the literature discuss approximations for either the standard normal cumulative distribution or the first order loss function and their inverse. However, a comprehensive study on piecewise linear upper and lower bounds for the first order loss function is still missing. In this work, we initially summarise a number of distribution independent results for the first order loss function and its complementary function. We then extend this discussion by focusing first on random variable featuring a symmetric distribution, and then on normally distributed random variables. For the latter, we develop effective piecewise linear upper and lower bounds that can be immediately embedded in MILP models. These linearisations rely on constant parameters that are independent of the mean and standard deviation of the normal distribution of interest. We finally discuss how to compute optimal linearisation parameters that minimise the maximum approximation error.
description: 22 pages, 7 figures, working draft
The Stokes-Einstein Relation at Moderate Schmidt Number
Creators: name: Usabiaga, F. Balboa
name: Xie, X.
name: Delgado-Buscalioni, R.
name: Donev, A.
Publisher: name: arXiv
Year: 2013
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: The Stokes-Einstein relation for the self-diffusion coefficient of a spherical particle suspended in an incompressible fluid is an asymptotic result in the limit of large Schmidt number, that is, when momentum diffuses much faster than the particle. When the Schmidt number is moderate, which happens in most particle methods for hydrodynamics, deviations from the Stokes-Einstein prediction are expected. We study these corrections computationally using a recently-developed minimally-resolved method for coupling particles to an incompressible fluctuating fluid in both two and three dimensions. We find that for moderate Schmidt numbers the diffusion coefficient is reduced relative to the Stokes-Einstein prediction by an amount inversely proportional to the Schmidt number in both two and three dimensions. We find, however, that the Einstein formula is obeyed at all Schmidt numbers, consistent with linear response theory. The numerical data is in good agreement with an approximate self-consistent theory, which can be used to estimate finite-Schmidt number corrections in a variety of methods. Our results indicate that the corrections to the Stokes-Einstein formula come primarily from the fact that the particle itself diffuses together with the momentum. Our study separates effects coming from corrections to no-slip hydrodynamics from those of finite separation of time scales, allowing for a better understanding of widely observed deviations from the Stokes-Einstein prediction in particle methods such as molecular dynamics.
description: Submitted
Perturbed vortex lattices and the stability of nucleated topological phases
Creators: name: Lahtinen, Ville
name: Ludwig, Andreas W. W.
name: Trebst, Simon
Publisher: name: arXiv
Year: 2013
Subjects: subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We study the stability of nucleated topological phases that can emerge when interacting non-Abelian anyons form a regular array. The studies are carried out in the context of Kitaev's honeycomb model, where we consider three distinct types of perturbations in the presence of a lattice of Majorana mode binding vortices -- spatial anisotropy of the vortices, dimerization of the vortex lattice and local random disorder. While all the nucleated phases are stable with respect to weak perturbations of each kind, strong perturbations are found to result in very different behavior. Anisotropy of the vortices stabilizes the strong-pairing like phases, while dimerization can recover the underlying non-Abelian phase. Local random disorder, on the other hand, can drive all the nucleated phases into a gapless thermal metal state. We show that all these distinct behavior can be captured by an effective staggered tight-binding model for the Majorana modes. By studying the pairwise interactions between the vortices, i.e. the amplitudes for the Majorana modes to tunnel between vortex cores, the locations of phase transitions and the nature of the resulting states can be predicted. We also find that due to oscillations in the Majorana tunneling amplitude, lattices of Majorana modes may exhibit a Peierls-like instability, where a dimerized configuration is favored over a uniform lattice. As the nature of the nucleated phases depends only on the Majorana tunneling, our results apply also to other system supporting localized Majorana mode arrays, such as Abrikosov lattices in p-wave superconductors, Wigner crystals in Moore-Read fractional quantum Hall states or arrays of topological nanowires.
description: 13 pages, 4 pages of appendices, 24 figures. Published version
Nolavia stylifer
Creators: name: Murcia-Moreno, Daniel
name: Gálvez, Dumas
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Sparassidae
Nolavia
Nolavia stylifer

description: Nolavia stylifer (F. O. Pickard-Cambridge, 1900)
Materials
Type status: Other material. Occurrence: recordedBy: Daniel Murcia & Dumas Galvez; sex: 1 male; occurrenceID: 53B17A08-602D-5C95-AD7E-15181F209E40; Location: country: Panama; locality: Coiba; verbatimLocality: Playa Hermosa; verbatimCoordinates: 7 ° 30 ' 53.708 '' N 81 ° 52 ' 0.411 '' O; Event: eventDate: 26-03 - 22
Distribution
Mexico, Brazil
Notes
MX, BR
description: Published as part of Murcia-Moreno, Daniel & Gálvez, Dumas, 2024, Preliminary checklist of spiders (Araneae) from Coiba National Park, Panama, pp. e 117642 in Biodiversity Data Journal 12 on page e117642, DOI: 10.3897/BDJ.12.e117642
Skeptical Theism, God, and Evidence
Creators: name: Hendricks, Perry C
Publisher: name: Purdue University Graduate School
Year: 2022
Subjects: Metaphysics
Epistemology
Philosophy of religion

description: Skeptical theism is an important position (or set of positions) that—if true—has significant implications in the philosophy of religion regarding the epistemic status of theism and atheism. Broadly speaking, skeptical theists are theists who are skeptical about the ability of humans to discern, by certain methods, the probability of God permitting certain states of affairs. In this dissertation, I argue in favor of two types of skeptical theism and consider their implications. In Chapter 1, I explain two types of skeptical theism—Axiological Skeptical Theism and Deontological Skeptical Theism—and argue in favor of each position. I consider numerous objections to these views, arguing that they all fail. This, however, only matters if these positions have a significant upshot. Accordingly, in Chapter 2, I argue that Axiological and Deontological Skeptical Theism undermine both axiological and deontological ‘noseeum’ arguments from evil, the equiprobability argument from evil, and both axiological and deontological Humean arguments from evil. So, the upshot of Axiological and Deontological Skeptical Theism is significant. Chapter 3 considers whether Axiological and Deontological Skeptical Theism result in too much skepticism: I consider whether these views provide a defeater for our commonsense beliefs. In doing so, I consider numerous types of defeaters, arguing that neither Axiological nor Deontological Skeptical Theism provide such defeaters. In Chapter 4, I consider whether one can consistently accept both Axiological and Deontological Skeptical Theism while making predictions about how God would act—a crucial aspect of theodicy and natural theology. I argue that there are two ways that one can do so: one way involving intuition and another way involving metaethics. The way involving intuition is, I argue, narrowsince it will have a limited scope. By contrast, the way involving metaethics, I argue, has a broad scope. Finally, Chapter 5 considers the so-called commonsense problem of evil. Some philosophers have argued that the commonsense problem of evil is untouched by all types of skeptical theism. I argue that the traditional commonsense problem of evil fails, but that a revamped version of it poses more of a threat. However, I claim that the revamped argument ultimately fails as well
Instruct-ULTRA D5.1 Public list of services offered to industries
Creators: name: Banci, Lucia
name: Morelli, Francesca
name: Pierattelli, Roberta
name: Gray, Naomi
Publisher: name: Zenodo
Year: 2020

description: This deliverable reports on the activities carried out to publicise the services offered by Instruct-ERIC centres to Industry. A survey of Instruct Centres was carried out to establish their level of involvement in providing access to users from industry. From this a list of Centres and the service that they are able to offer on fee for service was compiled. Web pages specifically for industry have been developed on the new Instruct-ERIC website on which these services are attractively presented and how to access them.
Wilfredomys oenax
Creators: name: Musser, Guy G.
name: Carleton, Michael D.
Publisher: name: Zenodo
Year: 1993
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Muridae
Wilfredomys
Wilfredomys oenax

description: Wilfredomys oenax (Thomas, 1928). Ann. Mag Nat. Hist., ser. 10, 1:154. TYPE LOCALITY: Brazil, Rio Grande do Sul, San Lorenzo. DISTRIBUTION: SE Brazil to C Uruguay. COMMENTS: Morphology redescribed by Pine (1980b).
description: Published as part of Guy G. Musser & Michael D. Carleton, 1993, Order Rodentia - Family Muridae, pp. 501-755 in Mammal Species of the World (2 nd Edition), Washington and London :Smithsonian Institution Press on page 752, DOI: 10.5281/zenodo.7353098
description: {"references": ["Pine, R. H. 1980 b. Notes on rodents of the genera Wiedomys and Thomasomys (including Wilfredomys). Mammalia, 44: 195 - 202."]}
Epidemic Spreading on Weighted Complex Networks
Creators: name: Sun, Ye
name: Liu, Chuang
name: Zhang, Chu-Xu
name: Zhang, Zi-Ke
Publisher: name: arXiv
Year: 2013
Subjects: subject: Physics and Society (physics.soc-ph)
subject: Social and Information Networks (cs.SI)
subject: FOS: Physical sciences
subject: FOS: Computer and information sciences

description: Nowadays, the emergence of online services provides various multi-relation information to support the comprehensive understanding of the epidemic spreading process. In this Letter, we consider the edge weights to represent such multi-role relations. In addition, we perform detailed analysis of two representative metrics, outbreak threshold and epidemic prevalence, on SIS and SIR models. Both theoretical and simulation results find good agreements with each other. Furthermore, experiments show that, on fully mixed networks, the weight distribution on edges would not affect the epidemic results once the average weight of whole network is fixed. This work may shed some light on the in-depth understanding of epidemic spreading on multi-relation and weighted networks.
Dark Sector Mass Relations from RG Focusing
Creators: name: Kearney, John
name: Pierce, Aaron
Publisher: name: arXiv
Year: 2013
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Dark sector mass relations, such as those which permit near-threshold or near-resonance annihilation in the early universe, could arise due to IR-attractive ratios in renormalization group equations. Achieving a particular ratio requires specific dark matter gauge charges or interactions, leading to predictions about the dark matter properties. Furthermore, additional states with masses comparable to the dark matter mass may be necessary, potentially giving rise to novel phenomenology. We explore this idea in the context of dark matter charged under a new gauged $U(1)_X$ that kinetically mixes with the Standard Model hypercharge.
description: 10 pages, 7 figures; v2: LHC projections in figure 1 slightly modified, conclusions unchanged
Wilfredomys pictipes
Creators: name: Musser, Guy G.
name: Carleton, Michael D.
Publisher: name: Zenodo
Year: 1993
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Muridae
Wilfredomys
Wilfredomys pictipes

description: Wilfredomys pictipes (Osgood, 1933). Field Mus. Nat. Hist. Pubi., Zool. Ser., 20(2):11. TYPE LOCALITY: Argentina, Misiones Prov., Caraguatay, Rio Parana, 100 mi S Rio Iguazu. DISTRIBUTION: NE Argentina and SE Brazil. COMMENTS: Provisionally assigned to Wilfredomys on the assertions of Osgood (1933b) and Pine (1980b) that pictipes is most closely related to oenax.
description: Published as part of Guy G. Musser & Michael D. Carleton, 1993, Order Rodentia - Family Muridae, pp. 501-755 in Mammal Species of the World (2 nd Edition), Washington and London :Smithsonian Institution Press on page 752, DOI: 10.5281/zenodo.7353098
description: {"references": ["Osgood, W. H. 1933 b. Two new rodents from Argentina. Field Museum of Natural History, Zoological Series, 20: 11 - 14.", "Pine, R. H. 1980 b. Notes on rodents of the genera Wiedomys and Thomasomys (including Wilfredomys). Mammalia, 44: 195 - 202."]}
Dolichognatha spinosa
Creators: name: Murcia-Moreno, Daniel
name: Gálvez, Dumas
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Tetragnathidae
Dolichognatha
Dolichognatha spinosa

description: Dolichognatha spinosa (Petrunkevitch, 1939)
Materials
Type status: Other material. Occurrence: recordedBy: Daniel Murcia & Dumas Galvez; sex: 1 male; occurrenceID: EABBF50E-5464-522B-A6A4-359472D3A74F; Location: country: Panama; locality: Coiba; verbatimLocality: Sendero Los Monos; verbatimCoordinates: 7 ° 36 ' 2.891 '' N 81 ° 43 ' 35.187 '' O; Event: eventDate: 8-12 - 22
Type status: Other material. Occurrence: recordedBy: Daniel Murcia & Dumas Galvez; sex: 1 male; occurrenceID: CE47FA2A-4E53-5EA1-83A6-144849CA8330; Location: country: Panama; locality: Coiba; verbatimLocality: Isla Rancheria; verbatimCoordinates: 7 ° 38 ' 14.867 '' N 81 ° 42 ' 10.497 '' O; Event: eventDate: 24-03 - 22
Type status: Other material. Occurrence: recordedBy: Daniel Murcia & Dumas Galvez; sex: 1 male; occurrenceID: F176E1ED-F5EC-5F09-867A-C2F87724B878; Location: country: Panama; locality: Coiba; verbatimLocality: Playa Hermosa; verbatimCoordinates: 7 ° 30 ' 53.708 '' N 81 ° 52 ' 0.411 '' O; Event: eventDate: 25-03 - 22
Type status: Other material. Occurrence: recordedBy: Daniel Murcia & Dumas Galvez; sex: 2 female, 1 male, 5 immature; occurrenceID: 3E152039-8A7D-5250-AF31-221BCC8838F2; Location: country: Panama; locality: Coiba; verbatimLocality: Isla Jicaron; verbatimCoordinates: 7 ° 17 ' 16.022 '' N 81 ° 46 ' 25.359 '' O; Event: eventDate: 8-12 - 23
Distribution
Panama (endemic)
Notes
PA
description: Published as part of Murcia-Moreno, Daniel & Gálvez, Dumas, 2024, Preliminary checklist of spiders (Araneae) from Coiba National Park, Panama, pp. e 117642 in Biodiversity Data Journal 12 on page e117642, DOI: 10.3897/BDJ.12.e117642
Sparianthis chickeringi
Creators: name: Murcia-Moreno, Daniel
name: Gálvez, Dumas
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Sparassidae
Sparianthis
Sparianthis chickeringi

description: Sparianthis chickeringi (Gertsch, 1941)
Materials
Type status: Other material. Occurrence: recordedBy: Daniel Murcia & Dumas Galvez; sex: 1 immature; occurrenceID: 1086C1D3-912B-58BF-97B3-2078FA0AFA48; Location: country: Panama; locality: Coiba; verbatimLocality: Sendero de Coiba AIP; verbatimCoordinates: 7 ° 36 ' 4.903 '' N 81 ° 43 ' 29.06 '' O; Event: eventDate: 24-03 - 22
Type status: Other material. Occurrence: recordedBy: Daniel Murcia & Dumas Galvez; sex: 1 female; occurrenceID: A369E71D-7C3A-54EF-89DE-A3D17A05BBC5; Location: country: Panama; locality: Coiba; verbatimLocality: Sendero Santa Cruz; verbatimCoordinates: 7 ° 37 ' 32.47 '' N 81 ° 43 ' 51.632 '' O; Event: eventDate: 28-08 - 21
Distribution
Panama (endemic)
Notes
PA
description: Published as part of Murcia-Moreno, Daniel & Gálvez, Dumas, 2024, Preliminary checklist of spiders (Araneae) from Coiba National Park, Panama, pp. e 117642 in Biodiversity Data Journal 12 on page e117642, DOI: 10.3897/BDJ.12.e117642
Phase diagram and the strong-coupling fixed point in the disordered O(n) loop model
Creators: name: Shimada, Hirohiko
name: Jacobsen, Jesper Lykke
name: Kamiya, Yoshitomo
Publisher: name: arXiv
Year: 2013
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: High Energy Physics - Theory (hep-th)
subject: Mathematical Physics (math-ph)
subject: FOS: Physical sciences

description: We numerically study the phase diagram and critical properties of the two-dimensional disordered O(n) loop model by using the transfer matrix and the worm Monte Carlo methods. The renormalization group flow is extracted from the landscape of the effective central charge obtained by the transfer matrix method based on the Zamolodchikov's C-theorem. We find a line of random fixed points (FPs) for $n_c < n <1$, with $n_c \sim 0.5$, for which the central charge and critical exponents agree well with the results of the $1-n$ perturbative expansion. Furthermore, for $n> n_c$, we find a line of multicritical FPs at strong randomness. The FP at $n=1$ has $c=0.4612(4)$, which suggests that it belongs to the universality class of the Nishimori point in the $\pm J$ random-bond Ising model. For $n>2$, we find another critical line that connects the hard-hexagon FP in the pure model to a finite-randomness zero-temperature FP.
description: 10 pages, 4 figures, uses iopart.cls; clarified in Section 3.2 the relationship between the n=1 model and a spin glass by an exact duality mapping
Xenomys Merriam 1892
Creators: name: Musser, Guy G.
name: Carleton, Michael D.
Publisher: name: Zenodo
Year: 1993
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Muridae
Xenomys

description: Xenomys Merriam, 1892. Proc. Biol. Soc. Washington, 7:160. TYPE SPECIES: Xenomys nelsoni Merriam, 1892. COMMENTS: Neotomine. Knowledge of biology and systematic relationships meager; among woodrats may share common ancestry with Hodomys (Carleton, 1980). Banded karyotype reported by Haiduk et al. (1988), who noted its resemblance to those of Onychomys and Peromyscus.
description: Published as part of Guy G. Musser & Michael D. Carleton, 1993, Order Rodentia - Family Muridae, pp. 501-755 in Mammal Species of the World (2 nd Edition), Washington and London :Smithsonian Institution Press on page 752, DOI: 10.5281/zenodo.7353098
description: {"references": ["Carleton, M. D. 1980. Phylogenetic relationships in neotomine-peromyscine rodents (Muroidea) and a reappraisal of the dichotomy within New World Cricetinae. Miscellaneous Publications, Museum of Zoology, University of Michigan, 157: 1 - 146.", "Haiduk, M. W., C. Sanchez-Hernandez, and R. J. Baker. 1988. Phylogenetic relationships of Nyctomys and Xenomys to other cricetine genera based on data from G-banded chromosomes. Southwestern Naturalist, 33: 397 - 403."]}
Dense nucleonic matter and the renormalization group
Creators: name: Drews, Matthias
name: Hell, Thomas
name: Klein, Bertram
name: Weise, Wolfram
Publisher: name: arXiv
Year: 2013
Subjects: subject: Nuclear Theory (nucl-th)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: Fluctuations are included in a chiral nucleon-meson model within the framework of the functional renormalization group. The model, with parameters fitted to reproduce the nuclear liquid-gas phase transition, is used to study the phase diagram of QCD. We find good agreement with results from chiral effective field theory. Moreover, the results show a separation of the chemical freeze-out line and chiral symmetry restoration at large baryon chemical potentials.
description: 4 pages, 2 figures, conference proceeding for INPC 2013
Higher Spin Cosmology
Creators: name: Krishnan, Chethan
name: Raju, Avinash
name: Roy, Shubho
name: Thakur, Somyadip
Publisher: name: arXiv
Year: 2013
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: General Relativity and Quantum Cosmology (gr-qc)
subject: FOS: Physical sciences

description: We construct cosmological solutions of higher spin gravity in 2+1 dimensional de Sitter space. We show that a consistent thermodynamics can be obtained for their horizons by demanding appropriate holonomy conditions. This is equivalent to demanding the integrability of the Euclidean boundary CFT partition function, and reduces to Gibbons-Hawking thermodynamics in the spin-2 case. By using a prescription of Maldacena, we relate the thermodynamics of these solutions to those of higher spin black holes in AdS_3.
description: 21 pages, v2: many typos fixed, refs added, v3: minor corrections/improvements, Phys. Rev. D version, v4: one more ref
Uaiuara undefined-1
Creators: name: Murcia-Moreno, Daniel
name: Gálvez, Dumas
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Sparassidae
Uaiuara
Uaiuara undefined-1

description: Uaiuara sp. 1
Materials
Type status: Other material. Occurrence: recordedBy: Daniel Murcia & Dumas Galvez; sex: 2 immature; occurrenceID: 5830AD2B-6812-599A-A92A-F20791A1192C; Location: country: Panama; locality: Coiba; verbatimLocality: Sendero Los Monos; verbatimCoordinates: 7 ° 36 ' 2.891 '' N 81 ° 43 ' 35.187 '' O; Event: eventDate: 19-10 - 22
description: Published as part of Murcia-Moreno, Daniel & Gálvez, Dumas, 2024, Preliminary checklist of spiders (Araneae) from Coiba National Park, Panama, pp. e 117642 in Biodiversity Data Journal 12 on page e117642, DOI: 10.3897/BDJ.12.e117642
Xenomys nelsoni Merriam 1892
Creators: name: Musser, Guy G.
name: Carleton, Michael D.
Publisher: name: Zenodo
Year: 1993
Subjects: Biodiversity
Taxonomy
Animalia
Chordata
Mammalia
Rodentia
Muridae
Xenomys
Xenomys nelsoni

description: Xenomys nelsoni Merriam, 1892. Proc. Biol. Soc. Washington, 7:161. TYPE LOCALITY: Mexico, Colima, Hacienda Magdalena, between Ciudad Colima and Manzanillo. DISTRIBUTION: Colima and westernmost Jalisco, Mexico.
description: Published as part of Guy G. Musser & Michael D. Carleton, 1993, Order Rodentia - Family Muridae, pp. 501-755 in Mammal Species of the World (2 nd Edition), Washington and London :Smithsonian Institution Press on page 752, DOI: 10.5281/zenodo.7353098
Instruct-ULTRA D4.1 Call 1 launched for developing new service provision of existing technologies and selection of qualifying projects
Creators: name: Owens, Ray
Publisher: name: Zenodo
Year: 2017

description: Work package 4 comprises two calls for proposals from the beneficiary partners to contribute to either Task 4.1 introducing new services or Task 4.2. providing access to new communities. Each partner has been allocated personnel resources and joint proposals from partners have been encouraged in order to effectively resource projects. Partners were asked for expressions of interest for Call 1 projects in May 2017 and the terms of reference of the project call discussed and agreed at the Instruct-ULTRA General Assembly on 24th May, held in Brno. Joint proposal discussions were initiated in Q2 2017 and collaborative negotiations followed during the drafting stages. Formal applications to Call 1 were opened via the Instruct website and the closing date for submissions was the 9th September 2017. Review of proposals by three members of the Instruct-ULTRA Scientific Advisory Board will be handled via email and, on the basis of feedback, projects will be selected by the Executive Board during Q4 2017. Projects are expected to start in January 2018 and run for up to two years.
A Very Intense Neutrino Super Beam Experiment for Leptonic CP Violation Discovery based on the European Spallation Source Linac: A Snowmass 2013 White Paper
Creators: name: Baussan, E.
name: Blennow, M.
name: Bogomilov, M.
name: Bouquerel, E.
name: Cederkall, J.
name: Christiansen, P.
name: Coloma, P.
name: Cupial, P.
name: Danared, H.
name: Densham, C.
name: Dracos, M.
name: Ekelof, T.
name: Eshraqi, M.
name: Martinez, E. Fernandez
name: Gaudiot, G.
name: Hall-Wilton, R.
name: Koutchouk, J. -P.
name: Lindroos, M.
name: Matev, R.
name: McGinnis, D.
name: Mezzetto, M.
name: Miyamoto, R.
name: Mosca, L.
name: Ohlsson, T.
name: Ohman, H.
name: Osswald, F.
name: Peggs, S.
name: Poussot, P.
name: Ruber, R.
name: Tang, J. Y.
name: Tsenov, R.
name: Vankova-Kirilova, G.
name: Vassilopoulos, N.
name: Wildner, E.
name: Wurtz, J.
Publisher: name: arXiv
Year: 2013
Subjects: subject: High Energy Physics - Experiment (hep-ex)
subject: High Energy Physics - Phenomenology (hep-ph)
subject: Accelerator Physics (physics.acc-ph)
subject: Instrumentation and Detectors (physics.ins-det)
subject: FOS: Physical sciences

description: Very intense neutrino beams and large neutrino detectors will be needed in order to enable the discovery of CP violation in the leptonic sector. We propose to use the proton linac of the European Spallation Source currently under construction in Lund, Sweden to deliver, in parallel with the spallation neutron production, a very intense, cost effective and high performance neutrino beam. The baseline program for the European Spallation Source linac is that it will be fully operational at 5 MW average power by 2022, producing 2 GeV 2.86 ms long proton pulses at a rate of 14 Hz. Our proposal is to upgrade the linac to 10 MW average power and 28 Hz, producing 14 pulses/s for neutron production and 14 pulses/s for neutrino production. Furthermore, because of the high current required in the pulsed neutrino horn, the length of the pulses used for neutrino production needs to be compressed to a few $μ$s with the aid of an accumulator ring. A long baseline experiment using this Super Beam and a megaton underground Water Cherenkov detector located in existing mines 300-600 km from Lund will make it possible to discover leptonic CP violation at 5 $σ$ significance level in up to 50% of the leptonic Dirac CP-violating phase range. This experiment could also determine the neutrino mass hierarchy at a significance level of more than 3 $σ$ if this issue will not already have been settled by other experiments by then. The mass hierarchy performance could be increased by combining the neutrino beam results with those obtained from atmospheric neutrinos detected by the same large volume detector. This detector will also be used to measure the proton lifetime, detect cosmological neutrinos and neutrinos from supernova explosions. Results on the sensitivity to leptonic CP violation and the neutrino mass hierarchy are presented.
description: 28 pages
Instruct-ULTRA D3.3 Process for establishing joint activities with new countries and formalising an agreement defining the shared programme
Creators: name: Owens, Ray
name: Gray, Naomi
Publisher: name: Zenodo
Year: 2018

description: A spotlight meeting to discuss expanding Instruct membership and international partnerships was held on 8th March in Oxford as part of the General Assembly Meeting of Instruct-ULTRA. Two external speakers gave presentations on the structural biology communities in Austria and Brazil respectively, as case studies of potential new membership/partnership countries. This report from the meeting forms the basis of Deliverable 3.3 and sets out the next steps for expanding Instruct-ERIC membership in Europe and developing partnerships outside of Europe.
Dolichognatha pentagona
Creators: name: Murcia-Moreno, Daniel
name: Gálvez, Dumas
Publisher: name: Zenodo
Year: 2024
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Araneae
Tetragnathidae
Dolichognatha
Dolichognatha pentagona

description: Dolichognatha pentagona (Hentz, 1850)
Materials
Type status: Other material. Occurrence: recordedBy: Daniel Murcia & Dumas Galvez; sex: 1 female, 1 male; occurrenceID: C3DFD38F-F91D-53BC-B455-D46D8F3AF9C8; Location: country: Panama; locality: Coiba; verbatimLocality: Sendero de Coiba AIP; verbatimCoordinates: 7 ° 36 ' 4.903 '' N 81 ° 43 ' 29.06 '' O; Event: eventDate: 6-12 - 22
Type status: Other material. Occurrence: recordedBy: Daniel Murcia & Dumas Galvez; sex: 2 immature; occurrenceID: E3F1B0E2-9B85-56B7-BAC9-98F1EF67E7BD; Location: country: Panama; locality: Coiba; verbatimLocality: Sendero Santa Cruz; verbatimCoordinates: 7 ° 37 ' 32.47 '' N 81 ° 43 ' 51.632 '' O; Event: eventDate: 28-08 - 21
Distribution
USA to Venezuela
Notes
NA-SA
description: Published as part of Murcia-Moreno, Daniel & Gálvez, Dumas, 2024, Preliminary checklist of spiders (Araneae) from Coiba National Park, Panama, pp. e 117642 in Biodiversity Data Journal 12 on page e117642, DOI: 10.3897/BDJ.12.e117642