cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
The autocorrelation function for spectral determinants of quantum graphs
Creators: name: Tanner, Gregor
Publisher: name: arXiv
Year: 2002
Subjects: subject: Chaotic Dynamics (nlin.CD)
subject: Quantum Physics (quant-ph)
subject: FOS: Physical sciences

description: The paper considers the spectral determinant of quantum graph families with chaotic classical limit and no symmetries. The secular coefficients of the spectral determinant are found to follow distributions with zero mean and variance approaching a constant in the limit of large network size. This constant is in general different from the random matrix result and depends on the classical limit. A closed expression for this system dependent constant is given here explicitly in terms of the spectrum of an underlying Markov process.
description: 10 pages, 2 figures
Additional file 1 of Abundance alteration of nondominant species in fecal-associated microbiome of patients with SAPHO syndrome
Creators: name: Zhen, Jianhua
name: Sun, Yuxiu
name: Zhao, Pengfei
name: Li, Chen
name: Wang, Hesong
name: Li, Yini
name: Zhao, Lu
name: Wang, Li
name: Huang, Guangrui
name: Xu, Anlong
Publisher: name: figshare
Year: 2021
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified

description: Additional file 1: Figure S1. Wilcoxon rank-sum test outputs of 6 genera correlated to clinical data.
Additional file 5 of Exercise interventions for people diagnosed with cancer: a systematic review of implementation outcomes
Creators: name: Czosnek, Louise
name: Richards, Justin
name: Zopf, Eva
name: Cormie, Prue
name: Rosenbaum, Simon
name: Rankin, Nicole M.
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: Additional file 5: Supplementary Table 5. Summary of results Implementation Outcomes.
Thermally activated interface motion in a disordered ferromagnet
Creators: name: Roters, L.
name: Lubeck, S.
name: Usadel, K. D.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We investigate interface motion in disordered ferromagnets by means of Monte Carlo simulations. For small temperatures and driving fields a so-called creep regime is found and the interface velocity obeys an Arrhenius law. We analyze the corresponding energy barrier as well as the field and temperature dependence of the prefactor.
description: accepted for publication in Computer Physics Communications
Supplemental Methods from Submesoscale coupling of krill and whales revealed by aggregative Lagrangian coherent structures
Creators: name: Fahlbusch, James A.
name: Cade, David E.
name: Hazen, Elliott L.
name: Elliott, Meredith L.
name: Saenz, Benjamin T.
name: Goldbogen, Jeremy A.
name: Jahncke, Jaime
Publisher: name: The Royal Society
Year: 2024
Subjects: classificationCode: 310399
subject: Ecology not elsewhere classified

description: A knitted R-Markdown PDF file that contains all of the code used in the analysis for this manuscript.
Sub-millimetre quantitative T1 mapping using inversion-recovery EPI and application for cortical depth-dependent fMRI at 7 Tesla
Creators: name: Sriranga Kashyap
name: Ivanov, Dimo
name: Havlicek, Martin
name: Poser, Benedikt A.
name: Kâmil Uludağ
Publisher: name: F1000 Research Limited
Year: 2019

description: The increased accessibility of ultra-high field scanners has resulted in an increased interest in studying cortical depth-dependent fMRI. The cortical depths are usually determined on an anatomical image which makes good co-registration with the distorted functional data crucial in such studies. The standard approaches to correct the distorted EPI data using algorithms such as FSL-TOPUP[1] might reduce the laminar information in the high-resolution fMRI data due to smoothing and interpolation. Furthermore, sub-optimal registration of the different images might lead to an erroneous classification of depths. The present study builds upon previous work [2],[3] to acquire sub-millimetre distortion-matched quantitative T1 image using inversion-recovery EPI (IR-EPI) at 7T and demonstrates the feasibility of using the IR-EPI T1 map to define cortical-depths for fMRI analyses.
Additional file 4 of Exercise interventions for people diagnosed with cancer: a systematic review of implementation outcomes
Creators: name: Czosnek, Louise
name: Richards, Justin
name: Zopf, Eva
name: Cormie, Prue
name: Rosenbaum, Simon
name: Rankin, Nicole M.
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: Additional file 4: Supplementary Table 4. Excluded Studies.
title: Correspondance avec Anne Baille, transférée à Caroline Petit, Dominique Mathez
Creators: name: Baille, Anne
Publisher: name: NAKALA - https://nakala.fr (Huma-Num - CNRS)
publisherIdentifier: https://ror.org/04ces3204
publisherIdentifierScheme: ROR
Year: 2020

description: 2 pièces jointes : "Compte rendu de la conf call BMS (Mrs Frédéric Bassi et Frédérique Berini), ANSM (Nathalie MORGENSZTEJN, Caroline SEMAILLE) et Docteur Leibowitch (ICCARRE SCIENCEX , lundi 25 juin vers 17 h30" ; "ATT00001.htm" (fichier vide).
description: Source: http://www.calames.abes.fr/pub/ms/Calames-2019311113254119
description: created: start=2018-06-21;end=2018-06-28
Additional file 3 of Exercise interventions for people diagnosed with cancer: a systematic review of implementation outcomes
Creators: name: Czosnek, Louise
name: Richards, Justin
name: Zopf, Eva
name: Cormie, Prue
name: Rosenbaum, Simon
name: Rankin, Nicole M.
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: Additional file 3: Supplementary Table 3. Quality Assessment.
Mesa tandrona Krombein Det Karl V. Krombein 1949
Creators: name: Boni, M.
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Tiphiidae
Mesa
Mesa tandrona

description: Mesa tandrona KROMBEIN 1949
 Mesa tandrona KROMBEIN 1949: 6 9 - 7 1. H o l o t y p u s: Madagascar = /V.d. Sambirano Madagascar A. Seyrig Coll./ /Hym slides 2446/ / Type Mesa tandrona Krombein Det Karl V. Krombein / / Holotype Cornell University N° 2428/ (red) CUIC. Paratypus: Madagascar = / V.d. Sambirano Madagascar A. Seyrig Coll./ / Allotype Mesa tandrona Krombein Det Karl V. Krombein / / Allotype Cornell University N° 2428/ (red) CUIC! Examined specimen.
M a t e r i a l. Madagascar = (1) /V. d. Sambirano Madagascar A. Seyrig Coll/ CUIC.
Female: fig. 163. Male genitalia described by KROMBEIN (1949).
Distribution range: Madagascar.
description: Published as part of Boni, M., 2013, Afrotropical taxa of the genus Mesa SAUSSURE 1892 (Hymenoptera, Tiphiidae, Myzininae), pp. 1657-1744 in Linzer biologische Beiträge 45 (2) on page 1691, DOI: 10.5281/zenodo.5303357
Additional file 1: of An investigation of dispositional mindfulness and mood during pregnancy
Creators: name: Krusche, Adele
name: Crane, Catherine
name: Dymond, Maret
Publisher: name: figshare
Year: 2019
Subjects: subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Developmental Biology

description: Checklist for Reporting Results of Internet E-Surveys (CHERRIES). (DOCX 15 kb)
Can We Observe Jet $P_T$-broadening in Heavy-Ion Collisions at the LHC?
Creators: name: Ringer, Felix
name: Xiao, Bo-Wen
name: Yuan, Feng
Publisher: name: arXiv
Year: 2019
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: Nuclear Experiment (nucl-ex)
subject: Nuclear Theory (nucl-th)
subject: FOS: Physical sciences

description: We investigate the effect of PT-broadening on jet substructure observables in heavy-ion collisions at the LHC. As an example, we focus on the opening angle of the two branches that satisfy the soft drop grooming condition in a highly energetic jet. The medium modification of the angular distribution can provide important information on the jet transport properties of hot QCD matter. In addition, we take into account a change of the overall fraction of quark and gluon jets in heavy-ion collisions. We comment on the comparison to a recent measurement from the ALICE Collaboration.
description: 6 pages, 2 figures
Supplemental Tables and Figures from Submesoscale coupling of krill and whales revealed by aggregative Lagrangian coherent structures
Creators: name: Fahlbusch, James A.
name: Cade, David E.
name: Hazen, Elliott L.
name: Elliott, Meredith L.
name: Saenz, Benjamin T.
name: Goldbogen, Jeremy A.
name: Jahncke, Jaime
Publisher: name: The Royal Society
Year: 2024
Subjects: classificationCode: 310399
subject: Ecology not elsewhere classified

description: Additional tables and figures referenced in the main text of the manuscript.
Additional file 2 of Exercise interventions for people diagnosed with cancer: a systematic review of implementation outcomes
Creators: name: Czosnek, Louise
name: Richards, Justin
name: Zopf, Eva
name: Cormie, Prue
name: Rosenbaum, Simon
name: Rankin, Nicole M.
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: Additional file 2: Supplementary Table 2. Definitions of terms for study classification [102–104].
End-to-end capacities of a quantum communication network
Creators: name: Pirandola, Stefano
Publisher: name: arXiv
Year: 2019
Subjects: subject: Quantum Physics (quant-ph)
subject: Other Condensed Matter (cond-mat.other)
subject: Mathematical Physics (math-ph)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: In quantum mechanics, a fundamental law prevents quantum communications to simultaneously achieve high rates and long distances. This limitation is well known for point-to-point protocols, where two parties are directly connected by a quantum channel, but not yet fully understood in protocols with quantum repeaters. Here we solve this problem bounding the ultimate rates for transmitting quantum information, entanglement and secret keys via quantum repeaters. We derive single-letter upper bounds for the end-to-end capacities achievable by the most general (adaptive) protocols of quantum and private communication, from a single repeater chain to an arbitrarily-complex quantum network, where systems may be routed through single or multiple paths. We analytically establish these capacities under fundamental noise models, including bosonic loss which is the most important for optical communications. In this way, our results provide the ultimate benchmarks for testing the optimal performance of repeater-assisted quantum communications.
description: End-to-end results first appeared in arXiv:1601.00966 (2016). Please cite as: "S. Pirandola, Commun. Phys. 2, 51 (2019); see also arxiv:1601.00966 (2016)"
Additional file 1 of HIV-related stigma in the UK then and now: to what extent are we on track to eliminate stigma? A qualitative investigation
Creators: name: Hedge, Barbara
name: Devan, Karrish
name: Catalan, Jose
name: Cheshire, Anna
name: Ridge, Damien
Publisher: name: figshare
Year: 2021
Subjects: subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Statistics
subject: FOS: Mathematics
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1. Interview guide: example of our study’s interview schedule, questions and topics.
Electronic structure of overstretched DNA
Creators: name: Maragakis, Paul
name: Barnett, Ryan Lee
name: Kaxiras, Efthimios
name: Elstner, Marcus
name: Frauenheim, Thomas
Publisher: name: arXiv
Year: 2002
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: FOS: Physical sciences

description: Minuscule molecular forces can transform DNA into a structure that is elongated by more than half its original length. We demonstrate that this pronounced conformational transition is of relevance to ongoing experimental and theoretical efforts to characterize the conducting properties of DNA wires. We present quantum mechanical calculations for acidic, dry, poly(CG).poly(CG) DNA which has undergone elongation of up to 90 % relative to its natural length, along with a method for visualizing the effects of stretching on the electronic eigenstates. We find that overstretching leads to a drastic drop of the hopping matrix elements between localized occupied electronic states suggesting a dramatic decrease in the conductivity through holes.
description: 4 pages
Mesa krombeini BONI BARTALUCCI 2005
Creators: name: Boni, M.
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Tiphiidae
Mesa
Mesa krombeini

description: Mesa krombeini BONI BARTALUCCI 2005
 Mesa krombeini BONI BARTALUCCI 2005: 1086. H o l o t y p u s: Madagascar = /Tananarive Madagascar Cornell Univ lot 879 sub1/ /Hym slides 2447/ / Allotype Mesa seyrigi Krombein Det Karl V. Krombein/ / Allotype Cornell University N° 2429/ (red) / Holotypus Mesa krombeini BONI BARTALUCCI des 2005/ (red) / Holotypus Cornell U. N° 7294/ (red) CUIC!
 Mesa seyrigi KROMBEIN 1949: 64-66 (only).
M a t e r i a l. Comoros = (1) /Mt Choungi Mayotte 9 Février 2004 Rèc. Parmaudeau/ /MHN Run. Ins. 4237/ MHNR.
Male genitalia described by KROMBEIN (1949).
D i s t r i b u t i o n r a n g e: Madagascar and Comore islands.
description: Published as part of Boni, M., 2013, Afrotropical taxa of the genus Mesa SAUSSURE 1892 (Hymenoptera, Tiphiidae, Myzininae), pp. 1657-1744 in Linzer biologische Beiträge 45 (2) on page 1692, DOI: 10.5281/zenodo.5303357
Effect of nonstationarities on detrended fluctuation analysis
Creators: name: Chen, Zhi
name: Ivanov, Plamen Ch.
name: Hu, Kun
name: Stanley, H. Eugene
Publisher: name: arXiv
Year: 2001
Subjects: subject: Data Analysis, Statistics and Probability (physics.data-an)
subject: Condensed Matter (cond-mat)
subject: FOS: Physical sciences

description: Detrended fluctuation analysis (DFA) is a scaling analysis method used to quantify long-range power-law correlations in signals. Many physical and biological signals are ``noisy'', heterogeneous and exhibit different types of nonstationarities, which can affect the correlation properties of these signals. We systematically study the effects of three types of nonstationarities often encountered in real data. Specifically, we consider nonstationary sequences formed in three ways: (i) stitching together segments of data obtained from discontinuous experimental recordings, or removing some noisy and unreliable parts from continuous recordings and stitching together the remaining parts -- a ``cutting'' procedure commonly used in preparing data prior to signal analysis; (ii) adding to a signal with known correlations a tunable concentration of random outliers or spikes with different amplitude, and (iii) generating a signal comprised of segments with different properties -- e.g. different standard deviations or different correlation exponents. We compare the difference between the scaling results obtained for stationary correlated signals and correlated signals with these three types of nonstationarities.
description: 17 pages, 10 figures, corrected some typos, added one reference
Additional file 1 of Exercise interventions for people diagnosed with cancer: a systematic review of implementation outcomes
Creators: name: Czosnek, Louise
name: Richards, Justin
name: Zopf, Eva
name: Cormie, Prue
name: Rosenbaum, Simon
name: Rankin, Nicole M.
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Cancer
subject: Science Policy
subject: Computational Biology

description: Additional file 1: Supplementary Table 1. Search Strategy.
New exotic beams from the SPIRAL 1 upgrade
Creators: name: Delahaye, P.
name: Dubois, M.
name: Maunoury, L.
name: Angot, J.
name: Bajeat, O.
name: Blank, B.
name: Cam, J. C.
name: Chauveau, P.
name: Frigot, R.
name: Jacquot, B.
name: Jardin, P.
name: Lecomte, P.
name: Hormigos, S.
name: Kamalou, O.
name: Kuchi, V.
name: Osmond, B.
name: Retailleau, B. M.
name: Savalle, A.
name: Stora, T.
name: Toivanen, V.
name: Thomas, J. C.
name: Traykov, E.
name: Ujic, P.
name: Vondrasek, R.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Accelerator Physics (physics.acc-ph)
subject: Nuclear Experiment (nucl-ex)
subject: FOS: Physical sciences

description: Since 2001, the SPIRAL 1 facility has been one of the pioneering facilities in ISOL techniques for reaccelerating radioactive ion beams: the fragmentation of the heavy ion beams of GANIL on graphite targets and subsequent ionization in the Nanogan ECR ion source has permitted to deliver beams of gaseous elements (He, N, O, F, Ne, Ar, Kr) to numerous experiments. Thanks to the CIME cyclotron, energies up to 20 AMeV could be obtained. In 2014, the facility was stopped to undertake a major upgrade, with the aim to extend the production capabilities of SPIRAL 1 to a number of new elements. This upgrade, which is presently under commissioning, consists in the integration of an ECR booster in the SPIRAL 1 beam line to charge breed the beam of different 1+ sources. A FEBIAD source (the so-called VADIS from ISOLDE) was chosen to be the future workhorse for producing many metallic ion beams. The charge breeder is an upgraded version of the Phoenix booster which was previously tested in ISOLDE. The performances of the aforementioned ingredients of the upgrade (targets, 1+ source and charge breeder) have been and are still being optimized in the frame of different European projects (EMILIE, ENSAR and ENSAR2). The upgraded SPIRAL 1 facility will provide soon its first new beams for physics and further beam development are undertaken to prepare for the next AGATA campaign. The results obtained during the on-line commissioning period permit to evaluate intensities for new beams from the upgraded facility.
description: 9 pages, 12 figures, conference proceedings of EMIS 2018, CERN, Geneva, to appear in Nuclear Instruments and Methods B
The anaphase promoting complex promotes NHEJ repair through stabilizing Ku80 at DNA damage sites
Creators: name: Ma, Chengxian
name: Ha, Kyungsoo
name: Kim, Min-su
name: Noh, Young-Woock
name: Lin, Han
name: Tang, Lichun
name: Zhu, Qing
name: Zhang, Dan
name: Chen, Huan
name: Han, Suxia
name: Zhang, Pumin
Publisher: name: Taylor & Francis
Year: 2018
Subjects: subject: Biophysics
subject: Biochemistry
subject: Physical Sciences not elsewhere classified
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Hematology

description: Double-strand breaks (DSBs) are repaired through two major pathways, homology-directed recombination (HDR) and non-homologous end joining (NHEJ). The choice between these two pathways is largely influenced by cell cycle phases. HDR can occur only in S/G2 when sister chromatid can provide homologous templates, whereas NHEJ can take place in all phases of the cell cycle except mitosis. Central to NHEJ repair is the Ku70/80 heterodimer which forms a ring structure that binds DSB ends and serves as a platform to recruit factors involved in NHEJ. Upon completion of NHEJ repair, DNA double strand-encircling Ku dimers have to be removed. The removal depends on ubiquitylation and proteasomal degradation of Ku80 by the ubiquitin E3 ligases RNF8. Here we report that RNF8 is a substrate of APCCdh1 and the latter keeps RNF8 level in check at DSBs to prevent premature turnover of Ku80.
Mesa dioica Boni 2013, nov.sp.
Creators: name: Boni, M.
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Tiphiidae
Mesa
Mesa dioica

description: Mesa dioica nov.sp.
H o l o t y p u s - Yemen = / Yemen Al Kowd 15-28.II.1993 A. Van Harten mal. Trap/ ZMA
P a r a t y p u s - Somalia = /Brit. Somaliland Hargeisa V.1949 KM. Guichard 13.H.1951.406/ BMNH.
P a r a t y p e s - Yemen = (1) / Yemen Al Kowd 15-28.II.1993 A. Van Harten mal. Trap /, ZMA; (1) / Al Kowd IV.1993 A. Van Harten Mal. Trap / ZMA.
Female: figs 177-179.
 Black. Brown: antennae, legs and metasoma but ferruginous last two metameri and apex of 4 th one. Wings very pale yellowish.
 cOc worn out along vertex. Sub elliptic furrow on P disk; posterior area with irregular and ill defined p; postero lateral areas with very fine wrinkles. Epipygium mostly p, with a narrow wrinkled subapical stripe (as wide as ¼ total length of epipygium). Gradulus present on 3 rd tergum, absent on 4 th one. mR (at x40) on  Es 1 ,  Es 2 , among p on propodeal disk, metameri but last one and 1 st tergum.
Male (Holotype): figs 180-187. Body size: 9 mm.
 Black. Pale yellow: the whole clypeus apart the semitransparent ventral border, subapical Tsa, spot on lower genae near base of mandible, upper half of mandibles, spot on anteroventral tooth and subapical stripe on  N 1  disk, half tegula, perimetral  LaSt 2 , ventral coxae, most of legs, apical stripe with waving fore edge on 1 st to 6 th terga and 2 nd to6th sterna. Flagellum bicolor, brown upperside, orange ventral side. Wings hyaline.
 Mid flagellomeri thick with a ratio L/LA more than 2.2. Fore border of  N 1  disk distinctly angled but without prominent lamina, its anteroventral corner with acute tooth.  Em 3  feebly corrugated throughout. No bipunctate terga. Epipygium with longitudinal swelling and convex profile in lateral aspect, with a very shallow, almost undetectable, median notch.
Paratype from Somaliland differs in having two spots instead of subapical stripe on sterna, a bit lesser thick flagellomeri, and a bit deeper median notch of epipygium.
Derivatio nominis. From the Greek word įȚȠȚțȑȦ meaning to live apart, in two houses.
description: Published as part of Boni, M., 2013, Afrotropical taxa of the genus Mesa SAUSSURE 1892 (Hymenoptera, Tiphiidae, Myzininae), pp. 1657-1744 in Linzer biologische Beiträge 45 (2) on page 1693, DOI: 10.5281/zenodo.5303357
Self-consistent scattering theory of the pair distribution function in charged Bose fluids
Creators: name: Davoudi, B.
name: Asgari, R.
name: Polini, M.
name: Tosi, M. P.
Publisher: name: arXiv
Year: 2002
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: FOS: Physical sciences

description: We use a density functional theoretical approach to calculate the pair distribution function and the effective interactions in homogeneous fluids of spinless charged bosons. The scheme involves the self-consistent solution of a two-particle scattering problem with an effective scattering potential which embodies many-body effects and is adjusted to the compressibility sum rule. Numerical results are presented over an extensive range of density in both three and two dimensions.
description: 7 pages, 4 figures
Additional file 2: of Placenta-specific epimutation at H19-DMR among common pregnancy complications: its frequency and effect on the expression patterns of H19 and IGF2
Creators: name: Yamaguchi, Yuko
name: Tayama, Chiharu
name: Tomikawa, Junko
name: Akaishi, Rina
name: Kamura, Hiromi
name: Matsuoka, Kentaro
name: Wake, Norio
name: Minakami, Hisanori
name: Kato, Kiyoko
name: Yamada, Takahiro
name: Nakabayashi, Kazuhiko
name: Hata, Kenichiro
Publisher: name: figshare
Year: 2019
Subjects: subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Neuroscience
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Figure S3. Absence of copy number alterations at the H19-IGF2 imprinted gene cluster in the placenta and cord blood samples of cases 1, 2, and 3. (PDF 395 kb)
Additional file 1 of Antisense yycG modulates the susceptibility of Staphylococcus aureus to hydrogen peroxide via the sarA
Creators: name: Wu, Shizhou
name: Liu, Yunjie
name: Lei, Lei
name: Zhang, Hui
Publisher: name: figshare
Year: 2021
Subjects: subject: Biochemistry
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Additional file 1:Supplementary Figure 1. The productions of YycG (A) and YycF (B)were quantified in the groups of S. aureus, S. aureus + H2O2, AS yycG, and AS yycG + H2O2 for Western blotting. Supplementary Figure 2. Coomassie-stained gel supporting equal loading of the samples for total bacterial lysis (A). The purified recombinant YycF protein was visualized by Coomassie staining after SDS-PAGE (B).
Building a cluster: shocks, cavities, and cooling filaments in the group-group merger NGC 6338
Creators: name: O'Sullivan, Ewan
name: Schellenberger, Gerrit
name: Burke, D. J.
name: Sun, Ming
name: Vrtilek, Jan M.
name: David, Laurence P.
name: Sarazin, Craig
Publisher: name: arXiv
Year: 2019
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: High Energy Astrophysical Phenomena (astro-ph.HE)
subject: FOS: Physical sciences

description: We present deep Chandra, XMM-Newton, Giant Metrewave Radio Telescope and Halpha observations of the group-group merger NGC 6338. X-ray imaging and spectral mapping show that as well as trailing tails of cool, enriched gas, the two cool cores are embedded in an extensive region of shock heated gas with temperatures rising to ~5 keV. The velocity distribution of the member galaxies show that the merger is occurring primarily along the line of sight, and we estimate that the collision has produced shocks of Mach number M=2.3 or greater, making this one of the most violent mergers yet observed between galaxy groups. Both cool cores host potential AGN cavities and Halpha nebulae, indicating rapid radiative cooling. In the southern cool core around NGC 6338, we find that the X-ray filaments associated with the Halpha nebula have low entropies (<10 kev cm^2) and short cooling times (~200-300 Myr). In the northern core we identify an Halpha cloud associated with a bar of dense, cool X-ray gas offset from the dominant galaxy. We find no evidence of current jet activity in either core. We estimate the total mass of the system and find that the product of this group-group merger will likely be a galaxy cluster.
description: Accepted for publication in MNRAS, 22 pages with 16 figures and 7 tables, v2 adds references and corrects minor typographical errors identified at the proof stage
Dynamics of Annealed Systems under External Fields: CTRW and the Fractional Fokker-Planck Equations
Creators: name: Sokolov, I. M.
name: Blumen, A.
name: Klafter, J.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: FOS: Physical sciences

description: We consider the linear response of a system modelled by continuous-time random walks (CTRW) to an external field pulse of rectangular shape. We calculate the corresponding response function explicitely and show that it exhibits aging, i.e. that it is not translationally invariant in the time-domain. This result differs from that of systems which behave according to fractional Fokker-Planck equations.
Mesa eriosoma Boni 2013, nov.sp.
Creators: name: Boni, M.
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Tiphiidae
Mesa
Mesa eriosoma

description: Mesa eriosoma nov.sp.
H o l o t y p u s - Namibia = / Namibia Lüderitz Scorpion hill 27°49’S 16°36’E 09- 12.VIII.1997 Marais & Kirk-Spriggs Malaise trap/ /NNIC.
Holotype. figs 188-193. Body size: 13.5 mm.
 Black. Pale yellow: the whole of clypeus but semitransparent ventral edge; subapical Tsa; apical palpi; two lateral subapical stripes on  N 1  disk; half tegula; most of  LaSt 2 ; ventral surface of coxae, tarsi and most of legs; narrow apical stripe on 1st to 6 th terga; two lateral apical stripes on 2 nd to 6 th sterna. Wings hyaline.
 PoG about half FoO. Mid flagellomeri with a ratio L / LA mor than 2.4. No keel along fore border neither tooth on antero ventral corner of  N 1  disk.  Em 3  with strong wrinkles along the smm. Hind femur with a distinct ventral longitudinal lamella apically. 1 st to 5 th tergal surfaes bipunctate by sparse large p among very small p. Epipygium short and prominent upon the remainder of 7 th Te with very shallow median notch. Very long dense hair (longer than mid flagellomeri) on most of head and mesosoma, covering underlying integument on clypeus, frons, pronotal disk,  Es 1 ,  Es 2  and P. Long hair also on tergal surface.
N o t e. Distinct by the dense long hair on head and mesosoma and very narrow gonosquama.
Derivatio nominis. From the Greek words ȑȡȚȠȞ = wool and ıȫμĮ = body because of the dense hair on the head and mesosoma.
description: Published as part of Boni, M., 2013, Afrotropical taxa of the genus Mesa SAUSSURE 1892 (Hymenoptera, Tiphiidae, Myzininae), pp. 1657-1744 in Linzer biologische Beiträge 45 (2) on pages 1693-1694, DOI: 10.5281/zenodo.5303357
Functional surfaces through the creation of adhesion and charged patterns on azopolymer surface relief gratings
Creators: name: Capeluto, Maria Gabriela
name: Falcione, Rebeca
name: Salvador, Raquel Fernaandez
name: Eceiza, Aranxa
name: Goyanes, Silvia
name: Ledesma, Silvia Adriana
Publisher: name: arXiv
Year: 2019
Subjects: subject: Soft Condensed Matter (cond-mat.soft)
subject: Materials Science (cond-mat.mtrl-sci)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: We show that an azopolymer can be used to create a supramolecular architecture in a parallel process with patterned surface properties. By illuminating with an interference pattern, we created adhesion and charge patterns that reflect the molecular ordering. We studied the recording process in two limit situations. When birefringence dominates over mass transport, an adhesion pattern was recorded even in absence of a surface relief grating (SRG). When mass transport dominates, we measured a higher frequency adhesion and relief patterns on top of the SRG. We measured an increased negative charge in the regions where molecules are expected to be parallel aligned in trans conformational state.
description: 27 pages, 8 figures, supplementary matt
Additional file 1: of Report of a patient with a de novo non-recurrent duplication of 17p11.2p12 and Yq11 deletion
Creators: name: Fernández-Hernández, Liliana
name: Navarro-Cobos, María
name: Alcántara-Ortigoza, Miguel
name: Ramos-Ángeles, Sandra
name: Molina-Álvarez, Bertha
name: Sinhué Díaz-Cuéllar
name: Asch-Daich, Bárbara
name: Angel, Ariadna González-Del
Publisher: name: figshare
Year: 2019
Subjects: subject: Space Science
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: Molecular studies performed in the patient and his parents. (DOCX 242 kb)
Statistical mechanics of secondary structures formed by random RNA sequences
Creators: name: Bundschuh, R.
name: Hwa, T.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Statistical Mechanics (cond-mat.stat-mech)
subject: Biological Physics (physics.bio-ph)
subject: Biomolecules (q-bio.BM)
subject: FOS: Physical sciences
subject: FOS: Biological sciences

description: The formation of secondary structures by a random RNA sequence is studied as a model system for the sequence-structure problem omnipresent in biopolymers. Several toy energy models are introduced to allow detailed analytical and numerical studies. First, a two-replica calculation is performed. By mapping the two-replica problem to the denaturation of a single homogeneous RNA in 6-dimensional embedding space, we show that sequence disorder is perturbatively irrelevant, i.e., an RNA molecule with weak sequence disorder is in a molten phase where many secondary structures with comparable total energy coexist. A numerical study of various models at high temperature reproduces behaviors characteristic of the molten phase. On the other hand, a scaling argument based on the extremal statistics of rare regions can be constructed to show that the low temperature phase is unstable to sequence disorder. We performed a detailed numerical study of the low temperature phase using the droplet theory as a guide, and characterized the statistics of large-scale, low-energy excitations of the secondary structures from the ground state structure. We find the excitation energy to grow very slowly (i.e., logarithmically) with the length scale of the excitation, suggesting the existence of a marginal glass phase. The transition between the low temperature glass phase and the high temperature molten phase is also characterized numerically. It is revealed by a change in the coefficient of the logarithmic excitation energy, from being disorder dominated to entropy dominated.
description: 24 pages, 16 figures
Entropic Regularisation of Robust Optimal Transport
Creators: name: Dahyot, Rozenn
name: Alghamdi, Hana
name: Grogan, Mairead
Publisher: name: arXiv
Year: 2019
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Machine Learning (cs.LG)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: Grogan et al [11,12] have recently proposed a solution to colour transfer by minimising the Euclidean distance L2 between two probability density functions capturing the colour distributions of two images (palette and target). It was shown to be very competitive to alternative solutions based on Optimal Transport for colour transfer. We show that in fact Grogan et al's formulation can also be understood as a new robust Optimal Transport based framework with entropy regularisation over marginals.
description: 8 pages
Additional file 4 of Measuring the effectiveness of integrated vector management with targeted outdoor residual spraying and autodissemination devices on the incidence of dengue in urban Malaysia in the iDEM trial (intervention for Dengue Epidemiology in Malaysia): study protocol for a cluster randomized controlled trial
Creators: name: Saadatian-Elahi, Mitra
name: Alexander, Neal
name: Möhlmann, Tim
name: Langlois-Jacques, Carole
name: Suer, Remco
name: Ahmad, Nazni Wasi
name: Mudin, Rose Nani
name: Ariffin, Farah Diana
name: Baur, Frederic
name: Schmitt, Frederic
name: Richardson, Jason H.
name: Rabilloud, Muriel
name: Hamid, Nurulhusna Ab
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Additional file 4. SPIRIT 2013 Checklist: Recommended items to address in a clinical trial protocol and related documents*
Nanoscale Interlayer Defects in Iron Arsenides
Creators: name: Zheng, Qiang
name: Chi, Miaofang
name: Ziatdinov, Maxim
name: Li, 2 Li
name: Maksymovych, Petro
name: Chisholm, Matt F.
name: Kalinin, 1 Sergei V.
name: Sefat, Athena S.
Publisher: name: arXiv
Year: 2019
Subjects: subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: Using a local real-space microscopy probe, we discover evidence of nanoscale interlayer defects along the c-crystallographic direction in BaFe2As2 (122) based iron-arsenide superconductors. We find ordered 122 atomic arrangements within the ab-plane, and within regions of ~10 to 20 nm size perpendicular to this plane. While the FeAs substructure is very rigid, Ba ions are relatively weakly bound and can be displaced from the 122, forming stacking faults resulting in the physical separation of the 122 between adjacent ordered domains. The evidence for interlayer defects between the FeAs superconducting planes gives perspective on the minimal connection between interlayer chemical disorder and high-temperature superconductivity. In particular, the Cooper pairs may be finding a way around such localized interlayer defects through a percolative path of the ordered layered 122 lattice that may not affect Tc.
Mesa pentatyla Boni 2013, nov.sp.
Creators: name: Boni, M.
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Tiphiidae
Mesa
Mesa pentatyla

description: Mesa pentatyla nov.sp.
H o l o t y p u s: Angola = / Angola (A40) Tundavala 8-10 mls NW Sa da Bandeira 27- 29.III.1972 / /Southern African Exp. B.M. 1972.1/ BMNH.
P a r a t y p e s: Angola = (2) / Angola (A40) Tundavala 8-10 mls NW Sa da Bandeira 27- 29.III.1972 / / Southern African Exp. B.M. 1972.1/ BMNH; (1) / Angola (A6) Tundavala 8 mls NW Sa da Bandeira 23.II.1972 / / Southern African Exp. B.M. 1972.1/ BMNH.
P a r a t y p e s: Angola = (2) / Angola (A11) Bruco 26.II-2.III.1972 / /Southern African Exp. B.M. 1972.1/ BMNH.
Female: figs 223-225. Body size: 13 mm.
 Black. Bright ferruginous: tip of ventral clypeus, mandibles, scape, legs but coxae. Wings weakly yellowish. p deeply impressed on head and mesosoma, denser and often coalesced on lower frons, ocellar area, posterior vertex, middle disk and anterior lateral area of  N 1 , outer disk of  Es 2 . Disk and posterior surface of P completely sculptured with no distinct p but a little area near anteroventral corner of disk; fine wrinkles on its lateral areas. mR and shallow and sparse p (I far larger than their diameter) on Te, deeper p on Ste. cOc complete, even though somehow rough near vertex, with low buttressing ridge along it on temples and genae. Rough wrinkles on postero ventral corner of  N 1 . Median furrow well defined by lateral ridges crossing the whole P disk. Gradulus present on 3 rd tergum too. 6 th tergum almost completely wrinkled but apical border.
 N o t e. It is very close to (M. erythropoda) in coloration, but differs in: red scape (dark brown); dark brown flagellum (bicolor, with reddish ventral side); cOc with buttressing ridges on temples and genae (absent); roughly wrinkled lateral  N 1  (largely shagreened with only short fine wrinkles); disk and posterior surface of P completely sculptured with no distinct p (with small, shallow p and distinct I throughout); gradulus on 3 rd tergum only (gradulus on both 3 rd and 4 th terga).
Male (Holotype): figs 226-230; body size: 14 mm.
 Black. Yellow: the whole clypeus, mandibles, subapical stripe and anteroventral corner on  N 1  disk, foreborder of tegulae, the whole  X 1  and most of  X 2 , ventral apex of  X 3  ventral femurs, fore tibiae, all tarsi, apical stripe with waving fore edge on 1 st to 6 th Te. Bipunctate area around ocelli and vertex by sparse small p among larger ones. Variabilty in size, 12 to 14 mm.
Epipygium without median notch and completely convex (well evident in back aspect) with a very weak lateral ridge just apically.
Derivatio nominis. From the number (ʌȑȞIJİ = five) of flagellar tyloida.
description: Published as part of Boni, M., 2013, Afrotropical taxa of the genus Mesa SAUSSURE 1892 (Hymenoptera, Tiphiidae, Myzininae), pp. 1657-1744 in Linzer biologische Beiträge 45 (2) on pages 1696-1697, DOI: 10.5281/zenodo.5303357
Pseudo-amenability of Brandt semigroup algebras
Creators: name: Sadr, Maysam Maysami
Publisher: name: arXiv
Year: 2019
Subjects: subject: Functional Analysis (math.FA)
subject: FOS: Mathematics

description: The pseudo-amenability of Brandt Banach semigroup algebras is considered.
description: This is an old paper published in 2009
On the formal equivalence of the TAP and thermodynamic methods in the SK model
Creators: name: Cavagna, Andrea
name: Giardina, Irene
name: Parisi, Giorgio
name: Mezard, Marc
Publisher: name: arXiv
Year: 2002
Subjects: subject: Disordered Systems and Neural Networks (cond-mat.dis-nn)
subject: Statistical Mechanics (cond-mat.stat-mech)
subject: FOS: Physical sciences

description: We revisit two classic Thouless-Anderson-Palmer (TAP) studies of the Sherrington-Kirkpatrick model [Bray A J and Moore M A 1980 J. Phys. C 13, L469; De Dominicis C and Young A P, 1983 J. Phys. A 16, 2063]. By using the Becchi-Rouet-Stora-Tyutin (BRST) supersymmetry, we prove the general equivalence of TAP and replica partition functions, and show that the annealed calculation of the TAP complexity is formally identical to the quenched thermodynamic calculation of the free energy at one step level of replica symmetry breaking. The complexity we obtain by means of the BRST symmetry turns out to be considerably smaller than the previous non-symmetric value.
description: 17 pages, 3 figures
Additional file 3 of Measuring the effectiveness of integrated vector management with targeted outdoor residual spraying and autodissemination devices on the incidence of dengue in urban Malaysia in the iDEM trial (intervention for Dengue Epidemiology in Malaysia): study protocol for a cluster randomized controlled trial
Creators: name: Saadatian-Elahi, Mitra
name: Alexander, Neal
name: Möhlmann, Tim
name: Langlois-Jacques, Carole
name: Suer, Remco
name: Ahmad, Nazni Wasi
name: Mudin, Rose Nani
name: Ariffin, Farah Diana
name: Baur, Frederic
name: Schmitt, Frederic
name: Richardson, Jason H.
name: Rabilloud, Muriel
name: Hamid, Nurulhusna Ab
Publisher: name: figshare
Year: 2021
Subjects: subject: Medicine
subject: Biotechnology
subject: Ecology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology
subject: Computational Biology

description: Additional file 3. Example of communication material: Poster installed in all intervention areas summarizing the intervention procedure and rules
Mesa sahariana Boni 2013, nov.sp.
Creators: name: Boni, M.
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hymenoptera
Tiphiidae
Mesa
Mesa sahariana

description: Mesa sahariana nov.sp.
H o l o t y p u s - Egypt = /Gebel Elba Egypt 1.33 Dr. H. Priesner/, OLML.
P a r a t y p u s - Lybia = /Tripolitania Tin Alcun (V. Iseien) X.1936 G. Scortecci/ MSNM.
Female: figs 241-242.
 Black. Metasoma is completely ferruginous but brown petiole. Wings hyaline. Calcaria and spines light yellowish. cOc complete on the upper side along vertex. Rounded edge between outer and anterior surfaces of  Es 2 . ¾ epipygium wrinkled, with dense apical micro p. Gradulus present on 3 rd tergum, absent in 4 th one. Scopa: fig. 242.
Male: (Holotype): figs 243-248. Body size: 14 mm.
 Black. Ferruginous underside of flagellum. Pale yellow: the whole clypeus but semitransparent ventral edge; subapical Tsa; lateral spot on fore border and subapical stripe on  N 1  disk; median spot on  Sc 2  and postscutellar area; ventral  X 1  and  X 2  and trochanters; most of the remainder of legs; apical stripes with waving fore edge on 1 st to 6 th terga and 2 nd to 6 th sterna. Wings hyaline. Mid flagellomeri with a ratio L / LA about 2.4. No acute keel along fore border, with acute prominent tooth on antero ventral corner of  N 1  disk with a ratio  LApos  /  Lmed  about 2.9. Apical hindfemur rounded.  Em 3  without p and wrinkles. Bipunctate tergal surface. No p on apical 1st sternum. Notch on 7th tergum as large as its lateral lobes, with a median longitudinal ridge. Volsella angled.
 N o t e. Notwithstanding the distance of the relative typical localities their coupling has been proposed because of the rarity of taxa of this genus in Palaerctic Region and particularly their being the unique records from Saharian Region and Northern Africa. Besides genitalia there are no very distinctive character states apart the contextual presence of anteroventral tooth and absence of laminated carina along fore border of  N 1  disk. Female is distinct from other female taxa with ferruginous metasoma by the shape of clypeus and scopa.
description: Published as part of Boni, M., 2013, Afrotropical taxa of the genus Mesa SAUSSURE 1892 (Hymenoptera, Tiphiidae, Myzininae), pp. 1657-1744 in Linzer biologische Beiträge 45 (2) on page 1698, DOI: 10.5281/zenodo.5303357
Giant anharmonicity and non-linear electron-phonon coupling in MgB$_{2}$; A combined first-principles calculations and neutron scattering study
Creators: name: Yildirim, T.
name: Gulseren, O.
name: Lynn, J. W.
name: Brown, C. M.
name: Udovic, T. J.
name: Qing, H. Z.
name: Rogado, N.
name: Regan, K. A.
name: Hayward, M. A.
name: Slusky, J. S.
name: He, T.
name: Haas, M. K.
name: Khalifah, P.
name: Inumaru, K.
name: Cava, R. J.
Publisher: name: arXiv
Year: 2001
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: We report first-principles calculations of the electronic band structure and lattice dynamics for the new superconductor MgB$_{2}$. The excellent agreement between theory and our inelastic neutron scattering measurements of the phonon density of states gives confidence that the calculations provide a sound description of the physical properties of the system. The numerical results reveal that the in-plane boron phonons (with E$_{2g}$ symmetry) near the zone-center are very anharmonic, and are strongly coupled to the partially occupied planar B $σ$ bands near the Fermi level. This giant anharmonicity and non-linear electron-phonon coupling is key to explaining the observed high T$_{c}$ and boron isotope effect in MgB$_{2}$
description: In this revised version (to appear in PRL) we also discuss the boron isotope effect. Please visit http://www.ncnr.nist.gov/staff/taner/mgb2 for details
Limitations of zT as a Figure of Merit for Nanostructured Thermoelectric Materials
Creators: name: Wang, Xufeng
name: Lundstrom, Mark
Publisher: name: arXiv
Year: 2019
Subjects: subject: Materials Science (cond-mat.mtrl-sci)
subject: Applied Physics (physics.app-ph)
subject: FOS: Physical sciences

description: A numerical study of thermoelectric nanocomposites is presented. Thermoelectric properties as a function of average grain size or nanoparticle density are examined by simulating the measurements as they would be done experimentally. In accordance with previous theory and experimental results, we find that the Seebeck coefficient, power factor and figure of merit, zT, can be increased by nanostructuring when energy barriers exist around the grain boundaries or embedded nanoparticles. When we simulate the performance of a thermoelectric cooler with the same material, however, we find that the maximum temperature difference is much less than expected from the given zT. The same nanocomposite without electrically active grain boundaries has a lower measured zT but a higher maximum cooling temperature. The physical reason for these results is explained. The results illustrate the limitations of zT as a figure of merit for nanocomposites with electrically active grain boundaries and suggest that the ability to enhance the electrical performance of thermoelectric materials by nanostructuring is limited.
description: 17 pages, 9 figures