cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 1: Table S1. of Genetics and epidemiology of hypothyroidism and symmetrical onychomadesis in the Gordon setter and the English setter
Creators: name: Ziener, Martine
name: Dahlgren, Stina
name: Thoresen, Stein
name: Lingaas, Frode
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: Evolutionary Biology
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences
subject: 60506 Virology

description: DLA alleles in the Gordon setter (GS). Table S2. DLA alleles in the English setter (ES). Table S3. DLA haplotypes associated with symmetrical onychomadesis and protection for symmetrical onychomadesis in the Gordon setter. Table S4. Oligonucleotide primers used in the study. (DOCX 26 kb)
Additional file 8: Figure S3. of Evolution of East Asia’s Arcto-Tertiary relict Euptelea (Eupteleaceae) shaped by Late Neogene vicariance and Quaternary climate change
Creators: name: Cao, Ya-Nan
name: Comes, Hans
name: Sakaguchi, Shota
name: Lu-Yao Chen
name: Ying-Xiong Qiu
Publisher: name: Figshare
Year: 2016
Subjects: subject: Molecular Biology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Bayesian Skyline Plots (BSPs) inferred from cpDNA (psbA–trnH, rpoB–trnC, rpL16, petN–trnC, matK, rbcL) sequences, and depicting changes of effective population size (N e; y–axis) through time [in million of years ago (Ma); x–axis] in: (a) E. pleiosperma; (b) E. polyandra; and (c) the J1 and (d) the J2 phylogroups of the latter species. The black solid line is the median estimate, and the gray dashed line marks the 95 % highest probability density (HPD) intervals. (PDF 475 kb)
Merlia normani Kirkpatrick 1908
Creators: name: Rützler, Klaus
name: Piantoni, Carla
name: Van, Rob W. M.
name: Díaz, Cristina
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Porifera
Demospongiae
Poecilosclerida
Merliidae
Merlia
Merlia normani

description: Merlia normani Kirkpatrick, 1908
Synonymy and references. Merlia normani Kirkpatrick, 1908: Hajdu & van Soest (2002): 692, fig. 1; Cruz (2002): 190 (2 figs.)
Material. USNM 1229067, Carrie Bow Cay forereef slope, lower surface of coral rock; 25 m; K. Ruetzler col. 26 Apr 1974. USNM 1229070, Carrie Bow Cay forereef slope, cave, 35 m; K. Ruetzler col. 26 Apr 1974. USNM 1229071, Carrie Bow Cay forereef, lower side of dead Agaricia coral, 8-10 m; K. Ruetzler col. 11 May 1975. USNM, 1229072, Curlew Bank forereef cave, 20 m; C. Piantoni col. 2 Jul 2007.
External morphology. Very thin crusts, 1–8 cm 2, 1 mm thick at most. No visible openings, color yellow to yellow orange.
Skeleton structure. The tissue overlays and fills the honeycombed calcareous base skeleton. Tylostyles form some tracts, from the base to the surface, points outward; they are accompanied by raphids (bundled in trichodragmas). Clavidiscs occur throughout the tissue but are most common in the ectosome, commas are found mostly in the choanosome.
Spicules. Very thin, straight tylostyles with oval head and sharp points: 120–182 x 3 (148 x 3) Μm; the shaft reaches 2 µm thickness at most; clavidiscs: 50–86 x 30–66 (65 x 48) Μm; raphids, microspined, a few are centrotylote: 60– 88 x 1–2 (80 x 2) Μm; micospined microxeas, bent in the center („commas,“ but with points on both sides, no knob-like thickening): 19–26 x <1–2 (23 x 1) Μm.
Ecology. A typical representative of forereef caves and similar cryptic habitats, 25–35 m and below.
Distribution. Eastern Mediterranean, eastern Atlantic (Azores, Canaries, Madeira), Bermuda, Caribbean.
description: Published as part of Rützler, Klaus, Piantoni, Carla, Van, Rob W. M. & Díaz, Cristina, 2014, Diversity of sponges (Porifera) from cryptic habitats on the Belize barrier reef near Carrie Bow Cay, pp. 1-129 in Zootaxa 3805 (1) on page 70, DOI: 10.11646/zootaxa.3805.1.1, http://zenodo.org/record/249983
Myrmekioderma rea
Creators: name: Rützler, Klaus
name: Piantoni, Carla
name: Van, Rob W. M.
name: Díaz, Cristina
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Porifera
Demospongiae
Halichondrida
Heteroxyidae
Myrmekioderma
Myrmekioderma rea

description: Myrmekioderma rea (de Laubenfels, 1934)
Synonymy and references. Myrmekioderma styx (de Laubenfels, 1934): Diaz et al. (1993): 303, figs. 38, 44.
Material. USNM 1229078, Carrie Bow Cay forereef cave, 18 m. K. Ruetzler col. 19 May 1979. USNM 1229079, Curlew Bank forereef cave, 20 m; C. Piantoni col. 2 Jul 2007. USNM 1229080, Curlew Bank forereef cave, 18 m; C. Piantoni and M. Parrish col. 22 Aug 2012.
External morphology. Cushion-shaped to irregularly massive, with surface structured by meandering ridges and grooves, with oscula elevated on lobes. Specimens up to 11 x 5 x 4 cm, oscula 1–3 mm in diameter. Consistency firm but easily crumbled; mucous when squeezed. Color yellow to orange red.
Skeleton structure. In the ectosome, small spicules (acanthoxeas) are oriented in paratangental to perpendicular fashion forming a crust. In the choanosome, large spicules (oxeas) occur without orientation, in criss-cross fashion with small ones mixed in, some form vague tracts leading toward the surface.
Spicules. Large oxeas smooth, gently bent, thickest in the center and gradually tapering to sharp points; a few are double bent (in the same direction) and there are some styloid and strongylote modifications: 680–1000 x 18–34 (673 x 27) Μm; acanthoxeas (microspined), more or less gently bent, sharply pointed at the ends, with surface covered irregularly with minute spines (0.5–1 µm): 226–410 x 8–15 (327 x 11) Μm; raphids (bundled in trichodragmas) very thin and easily overlooked, 110 x <1 µm.
Ecology. In forereef caves, 18–20 m; reported from deep reefs to 100 m.
Distribution. From Florida to the Gulf of Mexico and throughout the Caribbean.
description: Published as part of Rützler, Klaus, Piantoni, Carla, Van, Rob W. M. & Díaz, Cristina, 2014, Diversity of sponges (Porifera) from cryptic habitats on the Belize barrier reef near Carrie Bow Cay, pp. 1-129 in Zootaxa 3805 (1) on pages 72-74, DOI: 10.11646/zootaxa.3805.1.1, http://zenodo.org/record/249983
Additional file 1: of Cystatin C as a potential predictor of osteoprotegerin levels in healthy men, a cross-sectional, observational study
Creators: name: Kulcsar-Jakab, Eva
name: Zsofia Petho
name: Zoltan Pap
name: Kalina, Edit
name: Foldesi, Roza
name: Balogh, Adam
name: Antal-Szalmas, Peter
name: Bhattoa, Harjit
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: STROBE Statementâ  checklist of items that should be included in reports of observational studies.
Additional file 2: Table S2. of Burkitt lymphoma beyond MYC translocation: N-MYC and DNA methyltransferases dysregulation
Creators: name: Falco, Giulia De
name: Ambrosio, Maria
name: Fuligni, Fabio
name: Onnis, Anna
name: Bellan, Cristiana
name: Rocca, Bruno
name: Navari, Mohsen
name: Etebari, Maryam
name: Mundo, Lucia
name: Gazaneo, Sara
name: Facchetti, Fabio
name: Pileri, Stefano
name: Leoncini, Lorenzo
name: Piccaluga, Pier
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biophysics
subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Developmental Biology
subject: Cancer
subject: Plant Biology
subject: Computational Biology

description: Predicted target genes of miRNAs differentially expressed in MYC translocation-positive and -negative BLs. (DOC 50 kb)
Smoke and Mirrors: Tracing the Influence of the Opium Trade in the Dutch East India Company through Letters and Cargo Logs
Creators: name: Zhu, Jiaqi
name: Provatorova, Vera
name: Lottum, Jelle van
name: Erp, Marieke van
Publisher: name: Zenodo
Year: 2024

description: Tracing commodities and their impact on local and global history enables researchers to study the dynamics in social, cultural, and economic relations between different parts of the world. This short paper presents a case study of the Dutch East India Company’s (VOC) opium trade by tracing the appearances of the commodity opium in the digital version of two datasets, the General Missives (GM), and the Bookkeeper-General Batavia (BKB).

In this paper, we investigate the extent to which we can trace the importance of opium to the VOC quantitatively. Our hypothesis is that analysing the mentions of opium and other commodities in the GM and the BKB will show that the interest in opium grew disproportionately over time as compared to other commodities. By highlighting time periods and data points that deviate from general trends in the VOC trade, we can aid scholars in identifying turning points in overall VOC trade. Our research question is thus: to what extent can we identify changes in opium importance to the VOC through the GM and the BKB?
PHONOLOGICAL AND GRAMMATICAL MASTERY FOR ENGLISH LANGUAGE LEARNERS: PRACTICAL APPROACHES IN EFL TEACHING"
Creators: name: Sayfieva, Shakhlo
Publisher: name: Zenodo
Year: 2024

description: This article explores the teaching strategies used by me as an TESOL expert with examples and three elements. The first one-phonetics, phonology and morphology; the second- grammar and syntax, the last one is corpus based linguistic. The students, who study at Russian-language schools, face challenges in acquiring English due to the differences in grammar between English and their native languages. I employ a comparative approach, explaining English grammar in Russian to facilitate understanding. The article also discusses how lessons are structured, with an emphasis on grammar exercises, speaking, and listening activities to develop students' pronunciation, coherence, and communication skills.
600oC Nitrate salts operations at HPMS2 Molten Salt Tower Receiver Testing Jülich
Creators: name: Ingenwepelt, Kathrin
Publisher: name: Zenodo
Year: 2024

description: Presentation carried out within the scope of Fast-Track School #3 of the SALTOpower project, on "Molten Salt use cases, risks, bankability and new approaches", specifically "600oC Nitrate salts operations at HPMS2Molten Salt Tower Receiver Testing Jülich" by Kathrin Ingenwepelt, DLR.
Additional file 5: of
                     De novo assembly and analysis of changes in the protein-coding transcriptome of the freshwater shrimp Paratya australiensis (Decapoda: Atyidae) in response to acid sulfate drainage water
Creators: name: Bain, Peter
name: Gregg, Adrienne
name: Kumar, Anupama
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Plant Biology

description: Phylogenetic analysis of glutathione peroxidase sequences. (PDF 591Â kb)
MPEC 2024-J35 : 2024 JK
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2024
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469
subject: 2024 JK

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
Additional file 6: of
                     De novo assembly and analysis of changes in the protein-coding transcriptome of the freshwater shrimp Paratya australiensis (Decapoda: Atyidae) in response to acid sulfate drainage water
Creators: name: Bain, Peter
name: Gregg, Adrienne
name: Kumar, Anupama
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry

description: Phylogenetic analysis of nuclear hormone receptor sequences. (PDF 793Â kb)
ТЕМА: ОБЕСПЕЧЕНИЕ ЗАНЯТОСТИ НАСЕЛЕНИЯ НА ОСНОВЕ РАЗВИТИЯ ЖЕНСКОГО ПРЕДПРИНИМАТЕЛЬСТВА
Creators: name: Ёкубова Камола Мансурбековна 1- группа 1-курса Академического лицея Им М.С.Восиковой при ТГЮУ
Publisher: name: Zenodo
Year: 2025

description: В данной статье рассматривается участие женщин в экономике Узбекистана. Приведены правовые и правовые нормы из законодательства Республики Узбекистан. Освещены формирование и изменение условий занятости на основе развития женского предпринимательства. Основы гендерного порядка сформированы государственной политикой в целях достижения гендерного равенства в современный период. Какие принципы изменили гендерную политику Узбекистана за эти годы и как они были приняты населением.
MPEC 2024-Y138 : 2024 YP4
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2024
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469
subject: 2024 YP4

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
Dragmaxia undata Alvarez
Creators: name: Rützler, Klaus
name: Piantoni, Carla
name: Van, Rob W. M.
name: Díaz, Cristina
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Porifera
Demospongiae
Halichondrida
Axinellidae
Dragmaxia
Dragmaxia undata

description: Dragmaxia undata Alvarez, van Soest & Rützler, 1998
Synonymy and references. Dragmaxia undata Alvarez, van Soest & Rützler, 1998: Alvarez et al. (1998): 26 (with synonyms).
Material. USNM 1229073, Carrie Bow forereef slope, 15–35 m; coral rock, underside. K. Ruetzler col. 26 April 1974. USNM 1229074, Carrie Bow reef flat, underside of corrugated roofing tile, 0.5 m; K, Ruetzler col. 1 May 1974. USNM 1191336, Off Curlew Bank, forereef cave, 20 m; C. Piantoni col. 2 Jul 2007. USNM 1229075, Carrie Bow forereef cave wall, 25 m; M. C. Diaz col. 8 Sep 2009.
Comparative material: USNM 39451; paratype from Curaçao.
External morphology. Crusts and cushions, 4–30 cm 2, up to 10 mm thick, with corrugated, hispid surface. Brittle, bright orange red in life.
Skeleton structure. Tracts of styles leading toward surface and protruding from the ectosome. Criss-cross arrangement of styles and abundant trichodragmas in between.
Spicules. Styles and subtylostyles of great size range, gently curved, some with subterminal asymmetrical swellings: 300– 1280 x 7–28 (890 x 16) Μm; raphids, making up trichodragmas, are 60–600 x>1–2 (254 x 1) Μm; they have fine spines near the ends, pointing back toward the shaft.
Ecology. In cave habitats, including the lower surface of platy (coral) rubble, 0.5– 35 m.
Distribution. Known from the Netherlands Antilles and Colombia, now also from Belize.
Comments. The mean dimension of spicules in our material are larger than those in one paratype we examined (USNM 39451) but they still fall within the ranges of length and width. The great length of some raphids (bundled in trichodragmas) is unusual for known sponges.
description: Published as part of Rützler, Klaus, Piantoni, Carla, Van, Rob W. M. & Díaz, Cristina, 2014, Diversity of sponges (Porifera) from cryptic habitats on the Belize barrier reef near Carrie Bow Cay, pp. 1-129 in Zootaxa 3805 (1) on page 71, DOI: 10.11646/zootaxa.3805.1.1, http://zenodo.org/record/249983
Additional file 1: Table S1. of
                     De novo assembly and analysis of changes in the protein-coding transcriptome of the freshwater shrimp Paratya australiensis (Decapoda: Atyidae) in response to acid sulfate drainage water
Creators: name: Bain, Peter
name: Gregg, Adrienne
name: Kumar, Anupama
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: Genetics
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Inorganic Chemistry

description: Primer sequences used for qRT-PCR; Table S2: Physicochemical water quality parameters for acid drainage water and control river water; Table S3: Basic physicochemical water quality parameters for undiluted ADW, diluted ADW and river water during the laboratory exposures; and Table S4: Paired-end read counts obtained for each sample.) (DOCX 16Â kb)
Additional file 1: of Exploring participant appreciation of group-based principles for action in community-based physical activity programs for socially vulnerable groups in the Netherlands
Creators: name: Herens, Marion
name: Wagemakers, Annemarie
name: Vaandrager, Lenneke
name: Koelen, Maria
Publisher: name: Figshare
Year: 2015
Subjects: subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy

description: Descriptives of focus group respondents. (DOCX 15 kb)
Dragmacidon reticulatum Ridley & Dendy 1886
Creators: name: Rützler, Klaus
name: Piantoni, Carla
name: Van, Rob W. M.
name: Díaz, Cristina
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Porifera
Demospongiae
Halichondrida
Axinellidae
Dragmacidon
Dragmacidon reticulatum

description: Dragmacidon reticulatum (Ridley & Dendy, 1886)
Synonymy and references. Pseudaxinella lunaecharta (Ridley & Dendy, 1886): Wiedenmayer (1977): 155, fig. 156, pl. 31: 7–10, pl. 32: 1–3. Pseudaxinella reticulata (Ridley & Dendy, 1886): Alvarez et al. (1998): 15. Dragmacidon reticulatum (Ridley & Dendy, 1886): Rützler et al. (2009): 301.
Material. USNM 1191334, off Curlew Bank, forereef cave, 20 m; C. Piantoni col. 2 Jul 2007.
External morphology. Cushion with lobes, about 5 cm total diameter. Surface finely conulose (0.5 mm conules), with conspicuous, slightly raised circular oscula, 2-3 mm in diameter. Color bright orange red in live. Skeleton structure. Plumose spicule tracts leading from substrate to surface, some interconnected, loose spicules without particular orientation in between.
Spicules. The main spiculation is made up by styles, most of them bent in the upper third (toward the round end) where they are also the thickest: 290–340 x 15–20 (323 x 18) Μm. Along with the styles occur, fewer in number, slightly bent hastate oxeas: 360–410 x 15–18 (336 x 17) Μm. A small percentage of shorter and thinner styles and oxeas (averaging 180 x 9 Μm) are probably developmental stages
Ecology. Generally found on reefs and other hard bottoms, 1–70 m, also epibiotic, overgrowing other sessile organisms, including sponges.
Distribution. From Bermuda to North Carolina, Florida, throughout the Gulf of Mexico and the Caribbean, and to northeastern Brazil.
description: Published as part of Rützler, Klaus, Piantoni, Carla, Van, Rob W. M. & Díaz, Cristina, 2014, Diversity of sponges (Porifera) from cryptic habitats on the Belize barrier reef near Carrie Bow Cay, pp. 1-129 in Zootaxa 3805 (1) on pages 70-71, DOI: 10.11646/zootaxa.3805.1.1, http://zenodo.org/record/249983
Additional file 12: of The molecular landscape of premenopausal breast cancer
Creators: name: Liao, Serena
name: Hartmaier, Ryan
name: McGuire, Kandace
name: Puhalla, Shannon
name: Soumya Luthra
name: Chandran, Uma
name: Tianzhou Ma
name: Rohit Bhargava
name: Francesmary Modugno
name: Davidson, Nancy
name: Benz, Steve
name: Lee, Adrian
name: Tseng, George
name: Oesterreich, Steffi
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Computational Biology

description: Supplementary methods. This file contains additional details of the analyses. (DOCX 36 kb)
EXPLORING THE INTRICATE RELATIONSHIP BETWEEN METABOLIC DISORDERS AND CANCER: MECHANISMS, IMPLICATIONS, AND THERAPEUTIC OPPORTUNITIES
Creators: name: Sneha Sree S
name: Thangaraj Aravindan
name: Taniya M
name: K M Sundaram
Publisher: name: Zenodo
Year: 2024
Subjects: Metabolic Disorders, Cancer, Interconnection, Cancer Mechanisms, Implications, Therapeutic Opportunities.

description: Abstract

Metabolic disorders, including obesity, type 2 diabetes, and metabolic syndrome, are characterized by dysregulated metabolic processes such as glucose and lipid metabolism, leading to conditions like insulin resistance and chronic inflammation. In recent years, a growing body of evidence has highlighted the intricate relationship between metabolic disorders and cancer. This review aims to elucidate the underlying mechanisms linking these two conditions, exploring how metabolic dysregulation contributes to cancer development and progression. Additionally, we discuss the implications of this relationship for cancer prevention, diagnosis, and treatment, and we examine emerging therapeutic strategies targeting shared metabolic pathways. Understanding the complex interplay between metabolic disorders and cancer holds significant promise for improving patient outcomes and reducing the global burden of these interconnected diseases.
Doloisia (Doloisia) fulminans Schluger, Grochovskaya, Ngu, Hoe and Tung 1961
Creators: name: Nielsen, David H.
name: Robbins, Richard G.
name: Rueda, Leopoldo M.
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Actinedida
Trombiculidae
Doloisia
Doloisia fulminans

description: Doloisia (Doloisia) fulminans Schluger, Grochovskaya, Ngu, Hoe and Tung, 1961:
ORI
Doloisia fulminans Schluger, Grochovskaja, Ngu, Hoe and Tung, 1961
Doloisia (Doloisia) fulminans, Stekolnikov 2021
description: Published as part of Nielsen, David H., Robbins, Richard G. & Rueda, Leopoldo M., 2021, Annotated world checklist of the Trombiculidae and Leeuwenhoekiidae (1758 - 2021) (Acari: Trombiculoidea), with notes on nomenclature, taxonomy, and distribution, pp. 1-243 in Zootaxa 4967 (1) on page 49, DOI: 10.11646/zootaxa.4967.1.1, http://zenodo.org/record/4745510
MPEC 2024-Y139 : 2024 YQ4
Creators: name: Minor Planet Center Staff
Publisher: name: The Minor Planet Center
Year: 2024
Subjects: subject: Small Solar System bodies
valueUri: http://astrothesaurus.org/uat/1469
subject: 2024 YQ4

description: The Minor Planet Electronic Circulars contain information on unusual minor planets, routine data on comets and natural satellites, and occasional editorial announcements.  They are published on behalf of Division F of the International Astronomical Union by the Minor Planet Center, Smithsonian Astrophysical Observatory, Cambridge, MA 02138, U.S.A.
Ptilocaulis walpersii Duchassaing & Michelotti 1864
Creators: name: Rützler, Klaus
name: Piantoni, Carla
name: Van, Rob W. M.
name: Díaz, Cristina
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Porifera
Demospongiae
Halichondrida
Axinellidae
Ptilocaulis
Ptilocaulis walpersii

description: Ptilocaulis walpersii (Duchassaing & Michelotti, 1864)
Synonymy and references. Pandaros walpersii Duchassaing & Michelotti, 1864; Ptilocaulis walpersi (Duchassaing & Michelotti, 1864): Alvarez et al. (1998): 22 (with synonyms).
Material. USNM 1191335, Off Curlew Bank, forereef cave, 20 m; C. Piantoni col. 2 July 2007.
External morphology. A small erect fan with ridged and stubby surface, 2 cm tall (size of retained fragment). Tough, elastic, bright orange red in life.
Skeleton structure. Bundles of styles bound by spongin, extending from the base into the surface processes. They are interconnected by fibers and spicule tracts.
Spicules. Styles in two size classes. Shorter styles are more common, most of them with a sharp bend in the upper third of their length. Longer ones are bent (upper third) or straight, a few have subtylote heads. Styles I: 340–450 x 10–18 (396 x 16) Μm; Styles II: 420–690 x 12–14 (557 x 13) Μm.
Ecology. On reefs and in cave habitats, 1– 35 m.
Distribution. Bermuda, Florida, and the entire Caribbean; not reported from the Gulf of Mexico.
description: Published as part of Rützler, Klaus, Piantoni, Carla, Van, Rob W. M. & Díaz, Cristina, 2014, Diversity of sponges (Porifera) from cryptic habitats on the Belize barrier reef near Carrie Bow Cay, pp. 1-129 in Zootaxa 3805 (1) on page 71, DOI: 10.11646/zootaxa.3805.1.1, http://zenodo.org/record/249983
Additional file 13: Figure S1. of The molecular landscape of premenopausal breast cancer
Creators: name: Liao, Serena
name: Hartmaier, Ryan
name: McGuire, Kandace
name: Puhalla, Shannon
name: Soumya Luthra
name: Chandran, Uma
name: Tianzhou Ma
name: Rohit Bhargava
name: Francesmary Modugno
name: Davidson, Nancy
name: Benz, Steve
name: Lee, Adrian
name: Tseng, George
name: Oesterreich, Steffi
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 80699 Information Systems not elsewhere classified
subject: FOS: Computer and information sciences
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Plant Biology

description: Venn diagram representing datasets from The Cancer Genome Atlas (TCGA) and Molecular Taxonomy of Breast Cancer International Consortium (METABRIC). Figure S2. Principle component analysis (PCA) of (A) Agilent array and (B) methylation data. Figure S3. Differentially expressed (DE) genes between premenopausal (preM) and postmenopausal (postM) estrogen receptor-positive (ER+) tumors. Figure S4. Mutation spectra comparing somatic mutations identified in preM and postM ER+ tumors using MutSig. Figure S5. Differences in protein expression between preM and postM ER tumors (RPPA). Figure S6. Top canonical pathways enriched in preM ER+ tumors in TCGA RNA-Seq and TCGA Agilent. Figure S7. Top pathways identified in DAVID. Figure S8. Heatmap for top 50 entities in PARADIGM analysis when integrating Agilent array, copy number variation (CNV), somatic mutation and methylation data. Figure S9. Comparison of expression of laminin and integrin genes between preM and postM ER+ tumors. Figure S10. Hierarchical clustering of ER+ preM patients on the top 2,500 variable genes: (a) Agilent array; (b) RNA-Seq. Figure S11. LumA sub-cluster. (DOCX 3009 kb)
Myrmekioderma laminatum Rützler, Piantoni, Van & Díaz, 2014, new species
Creators: name: Rützler, Klaus
name: Piantoni, Carla
name: Van, Rob W. M.
name: Díaz, Cristina
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Porifera
Demospongiae
Halichondrida
Heteroxyidae
Myrmekioderma
Myrmekioderma laminatum

description: Myrmekioderma laminatum new species
(Figures 4 c, 37)
Material. Holotype: USNM 1229076, Carrie Bow Cay forereef, inner reef slope (near sand rough), between sheets of coralline algae under coral overhang, 20 m; K. Ruetzler col. 14 May 1975.
Paratype: USNM 1229077, Same location as holotype.
Diagnosis. Myrmekioderma with smooth, even or slightly bumpy surface, with long, smooth oxeas and styles, short, microspined oxeas, and one size class of raphids.
External morphology. Crusts on dead coral and coralline algae, penetrating crevices and forming multiple layers. Size, as sampled, up to 8 x 6 cm, 3–9 mm thick, depending on spaces between substratum pieces. Firm consistency, difficult to compress. Surface smooth or slightly bumpy, rough to the touch, with a few dispersed oscula (1–2 mm diameter). Color is orange at the surface, yellowish orange to ochre in the interior.
Skeleton structure. The ectosome shows a layer of embedded sediment and phalanx of perpendicular small acanthoxeas. The choanosome contains large oxeas and styles, acanthoxeas, and raphids in criss-cross fashion, without orientation except for a few short tracts.
Spicules. Long, thin, smooth oxeas and styles, with frequent modifications to strongyloxeas of large size range: 304– 1050 x 5–16 (897 x 13) Μm; microspined oxeas, with common styloid, strongylote, or (rare) tylostyloid modifications: 289–440 x 7–16 (365 x 12) Μm; very thin (0.1–0.5 µm), smooth raphids, about 7–130 µm long, in preparations often wrapped around megascleres making length determinations difficult.
Ecology. In the shade of a forereef coral overhang, encrusting and invading crevices of rubble, 20 m.
Distribution. Belize.
Etymology. The species name reflects the growth pattern in sheets, sandwiched between layers of coralline algae and coral rubble: lamina (Latin) = plate, sheet.
Comments. Two other species of Myrmekioderma occur in similar reef habitats, M. gyroderma (Alcolado) (Diaz et al., 1993: 303, figs. 39, 45; as M. rea) and M. rea (de Laubenfels) (see below). Our new species differs from both by lacking meandering surface grooves and thick, robust oxeas as megascleres. The microspined acanthoxeas are similar to those of M. rea (see below), whereas in M. gyroderma they are replaced by smooth, short and stout oxeas.
description: Published as part of Rützler, Klaus, Piantoni, Carla, Van, Rob W. M. & Díaz, Cristina, 2014, Diversity of sponges (Porifera) from cryptic habitats on the Belize barrier reef near Carrie Bow Cay, pp. 1-129 in Zootaxa 3805 (1) on page 72, DOI: 10.11646/zootaxa.3805.1.1, http://zenodo.org/record/249983
MOESM5 of Analysis of anti-malarial resistance markers in pfmdr1 and pfcrt across Southeast Asia in the Tracking Resistance to Artemisinin Collaboration
Creators: name: Krongkan Srimuang
name: Miotto, Olivo
name: Pharath Lim
name: Fairhurst, Rick
name: Kwiatkowski, Dominic
name: Woodrow, Charles
name: Imwong, Mallika
Publisher: name: Figshare
Year: 2016
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Evolutionary Biology
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: 60506 Virology

description: Additional file 5. Numbers of isolates with pure wild-type, mutant or mixed alleles at five well-described polymorphic sites in pfmdr1 (combination of PCRâ  RFLP and Illumina methods). *Three samples were mixed N86/86F infections.
MOESM2 of Analysis of anti-malarial resistance markers in pfmdr1 and pfcrt across Southeast Asia in the Tracking Resistance to Artemisinin Collaboration
Creators: name: Krongkan Srimuang
name: Miotto, Olivo
name: Pharath Lim
name: Fairhurst, Rick
name: Kwiatkowski, Dominic
name: Woodrow, Charles
name: Imwong, Mallika
Publisher: name: Figshare
Year: 2016
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Genetics
subject: Evolutionary Biology
subject: Ecology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 2. Screenshot of the MalariaGEN P. falciparum Community Project web application ( http://www.malariagen.net/apps/pf/4.0/ ). Location of six reference positions located within gene PF3D7_1455600 (ferlin, putative).
MOESM4 of Analysis of anti-malarial resistance markers in pfmdr1 and pfcrt across Southeast Asia in the Tracking Resistance to Artemisinin Collaboration
Creators: name: Krongkan Srimuang
name: Miotto, Olivo
name: Pharath Lim
name: Fairhurst, Rick
name: Kwiatkowski, Dominic
name: Woodrow, Charles
name: Imwong, Mallika
Publisher: name: Figshare
Year: 2016
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy
subject: Plant Biology

description: Additional file 4. Proportion of samples with amplified pfmdr1, based on a combination of PCR and Illumina-based sequencing.
Paravelia
Creators: name: Padilla-Gil, Dora Nancy
Publisher: name: Zenodo
Year: 2013
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Veliidae
Paravelia

description: Key to the Paravelia species recorded from Colombia
1. Smaller species, body length ≤ 8.5 mm; ground coloration black with limited contrasting paler markings................ 2
-. Larger species, body length ≥ 9 mm; ground coloration brown, lacking highly contrasting paler markings................ 5
2. Body length <5.0 mm.................................................................................. 3
-. Body length 8.4 mm; male paramere as in Fig. 22 ............................................... P. flavomarginata
3. Body length 4.0 mm; male paramere as in Fig. 23; inhabits bromeliads..................................... P. recens
-. Body length <4.0 mm; not inhabiting bromeliads............................................................4
4. Body length 2.76 mm; male paramere as in Fig. 6 ................................................. P. fanera sp. n.
-. Body length 3.0 mm; male paramere as in Fig. 15 ................................................ P. acantha sp. n.
5. Body length 9.0 mm; supra-anal hooks of male not projecting anteriorly (Fig. 24); male paramere as in Fig. 25 .................................................................................................... P. columbiensis
-. Body length ≥ 9.2 mm; supra-anal hooks of male projecting anteriorly (Fig. 26); male paramere as in Fig. 27 ............................................................................................................. P. daza
description: Published as part of Padilla-Gil, Dora Nancy, 2013, Two new species of Paravelia Breddin, 1898 (Hemiptera: Heteroptera: Veliidae) from Colombia, with a key to Colombian Paravelia species, pp. 491-502 in Zootaxa 3693 (4) on pages 500-501, DOI: 10.11646/zootaxa.3693.4.5, http://zenodo.org/record/219978
MOESM1 of Analysis of anti-malarial resistance markers in pfmdr1 and pfcrt across Southeast Asia in the Tracking Resistance to Artemisinin Collaboration
Creators: name: Krongkan Srimuang
name: Miotto, Olivo
name: Pharath Lim
name: Fairhurst, Rick
name: Kwiatkowski, Dominic
name: Woodrow, Charles
name: Imwong, Mallika
Publisher: name: Figshare
Year: 2016
Subjects: subject: Pharmacology
subject: Biotechnology
subject: Evolutionary Biology
subject: FOS: Biological sciences
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: 69999 Biological Sciences not elsewhere classified
subject: Plant Biology

description: Additional file 1. Reference positions used to estimate pfmdr1 copy number from WGS coverage data.
Ologamasus Berlese
Creators: name: Moraes, De
Publisher: name: Zenodo
Year: 2007
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Arachnida
Mesostigmata
Ologamasidae
Ologamasus

description: Ologamasus Berlese
Ologamasus Berlese, 1888: 194; Lee, 1970:84; Karg (1976): 185. Ologamasellus Berlese, 1914: 139.
description: Published as part of Moraes, De, 2007, A new species of Ologamasus (Acari: Ologamasidae) from Brazil, pp. 61-68 in Zootaxa 1462 on page 61, DOI: 10.5281/zenodo.176465
Additional File 3. Supplementary Information
Creators: name: Duverger, Wouter
name: Tsaka, Grigoria
name: Khodaparast, Ladan
name: Khodaparast, Laleh
name: Louros, Nikolaos
name: Schymkowitz, Joost
name: Rousseau, Frederic
Publisher: name: figshare
Year: 2024
Subjects: classificationCode: 310701
subject: Bacteriology
classificationCode: 310112
subject: Structural biology (incl. macromolecular modelling)
classificationCode: 401810
subject: Nanoscale characterisation
classificationCode: 401808
subject: Nanometrology

description: Additional file to "Single-cell infrared absorption spectroscopy of bacterial inclusion bodies"Lists information on samples and cantilevers used in Tables S1-4. Also contains Notes S1-4, with information on samples and cantilevers used, alternative analysis of PLL Frequency, second derivative spectra of heat shock IBs, and validations of AFM-IR results.
Additional file 2: of Antagonism between Staphylococcus epidermidis and Propionibacterium acnes and its genomic basis
Creators: name: Christensen, Gitte
name: Scholz, Christian
name: Enghild, Jan
name: Rohde, Holger
name: Kilian, Mogens
name: ThĂźrmer, Andrea
name: Elzbieta Brzuszkiewicz
name: Lomholt, Hans
name: BrĂźggemann, Holger
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: S. epidermidis strains used in this study. (DOCX 17 kb)
Hymeniacidon caerulea Pulitzer-Finali 1986
Creators: name: Rützler, Klaus
name: Piantoni, Carla
name: Van, Rob W. M.
name: Díaz, Cristina
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Porifera
Demospongiae
Halichondrida
Halichondriidae
Hymeniacidon
Hymeniacidon caerulea

description: Hymeniacidon caerulea Pulitzer-Finali, 1986
Synonymy and references. Hymeniacidon caerulea Pulitzer-Finali, 1986: 117, fig. 37.
Material. USNM 1229084, Carrie Bow Cay north back reef near crest, inside and underside of Acropora palmata coral rubble, 0.3 m; K. Ruetzler col. 23 Apr 1974. USNM 1229085, Carrie Bow Cay south back reef, behind reef crest, under coral rock, 1 m; K. Ruetzler col. 17 Jun 1977. USNM 1229086, Carrie Bow Cay reef flat, in dead conch shells, 1 m; K. Ruetzler and C. Piantoni col. 23 Feb 2006. USNM 1229087, Curlew Bank forereef cave, 20 m; C. Piantoni col. 29 Jun 2007. USNM 1229088, Curlew Bank forereef cave, 20 m; C. Piantoni and M. Parrish col. 23 Aug 2012.
External morphology. Crusts of 1-3 mm thickness, up to 6 cm 2 horizontal extension. Surface smooth; color deep blue, which barely changes in alcohol, even after years of storage.
Skeleton structure. Some spicules are arranged in tracts but most occur disorganized throughout the tissue
Spicules. Slender styles, the larger ones are generally thickest in the upper third of their length (toward the rounded end): 300–600 x 5–12 (443 x 9) Μm.
Ecology. Common in shaded habitats, 0.3–20 m
Distribution. Florida, Bahamas, and the entire Caribbean.
Comments. In the field this species is easily confused with Terpios fugax, which occurs in similar habitats and is also encrusting and of similar color. In both species, this conspicuous, deep blue color is caused by the same micro-symbiont, a blue-pigmented, multicellular, filamentous bacterium (Rützler & Smith, 1993).
description: Published as part of Rützler, Klaus, Piantoni, Carla, Van, Rob W. M. & Díaz, Cristina, 2014, Diversity of sponges (Porifera) from cryptic habitats on the Belize barrier reef near Carrie Bow Cay, pp. 1-129 in Zootaxa 3805 (1) on page 75, DOI: 10.11646/zootaxa.3805.1.1, http://zenodo.org/record/249983
Scopalina ruetzleri Wiedenmayer 1977
Creators: name: Rützler, Klaus
name: Piantoni, Carla
name: Van, Rob W. M.
name: Díaz, Cristina
Publisher: name: Zenodo
Year: 2014
Subjects: Biodiversity
Taxonomy
Animalia
Porifera
Demospongiae
Halichondrida
Scopalinidae
Scopalina
Scopalina ruetzleri

description: Scopalina ruetzleri (Wiedenmayer, 1977)
(Figure 2 g)
Synonymy and references. Ulosa ruetzleri Wiedenmayer, 1977: 145, fig. 149, pl. 30: 6, 7.
Material. USNM 1229081, Curlew Bank forereef cave, 20 m; C. Piantoni col. 28 Jun 2007. USNM 1229082, Carrie Bow Cay west, lagoon, under rubble, 1 m; K. Ruetzler, col. 20 Aug 2012. Additional specimens were noted in the Twin Cays and Tobacco Range mangroves but not collected.
External morphology. Thin (2–5 mm) cushions, covering up to 20 cm 2. Surface conulose (1–2 mm tall conules, 2–4 mm apart), with oscular openings (2 mm) here and there, some in small clusters. Consistency very soft and limp, color bright orange.
Skeleton structure. Ascending, ribbon-like spongin fibers, cored and accompanied by styloid spicules, end in the conules at the surface; spicules may protrude beyond like fine brushes.
Spicules. Long, slender styles, a few of them with oxeote modifications: 510–680 x 5–9 (600 x 8) Μm.
Ecology. Observed mainly in shaded habitats, such as mangrove prop roots and in the back of peat undercuts, and under reef overhangs as well as in caves, 0.3– 20 m.
Distribution. Tropical western Atlantic, from Bermuda to the Bahamas and throughout the Caribbean region.
Comments. The spicule dimensions in our specimens are larger than those given by the original author (350–450 x 5–7 Μm: Wiedenmayer, 1977) but all other taxonomic characteristics are identical.
description: Published as part of Rützler, Klaus, Piantoni, Carla, Van, Rob W. M. & Díaz, Cristina, 2014, Diversity of sponges (Porifera) from cryptic habitats on the Belize barrier reef near Carrie Bow Cay, pp. 1-129 in Zootaxa 3805 (1) on page 74, DOI: 10.11646/zootaxa.3805.1.1, http://zenodo.org/record/249983
Additional file 1: Figure S1. of Cross-sectional association of volume, blood pressures, and aortic stiffness with left ventricular mass in incident hemodialysis patients: the Predictors of Arrhythmic and Cardiovascular Risk in End-Stage Renal Disease (PACE) study
Creators: name: Kim, Esther
name: Sozio, Stephen
name: Estrella, Michelle
name: Jaar, Bernard
name: Shafi, Tariq
name: Meoni, Lucy
name: Kao, Wen
name: Joao Lima
name: Rulan Parekh
Publisher: name: Figshare
Year: 2015
Subjects: subject: Space Science
subject: Medicine
subject: Cell Biology
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Inorganic Chemistry
subject: FOS: Chemical sciences
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Boxplot of left ventricular mass index (LVMI) and quartiles of systolic or diastolic blood pressures measured as predialysis 3-month average BP measurement stratified by ethnicity. Figure S2: Boxplot of left ventricular mass index (LVMI) and quartiles of systolic or diastolic blood pressures measured as prior to clinic BP measurement stratified by ethnicity. Figure S3: Boxplot of left ventricular mass index (LVMI) and quartiles of systolic or diastolic blood pressures measured as non-dialysis supine BP measurement stratified by ethnicity. Table S1: Independent associations of predialysis blood pressure, arterial, and volume measures with LVMI by linear regression among incident hemodialysis participants. Table S2: Independent associations of blood pressure prior to study visit, arterial, and volume measures withLVMI by linear regression among incident hemodialysis participants. Table S3: Independent associations of mean arterial pressure, arterial, and volume measures with LVMI by linear regression among incident hemodialysis participants. Table S4: Independent associations of pulse pressures, arterial, and volume measures with LVMI by linear regression among incident hemodialysis participants. Table S5: Association of preload and afterload measures with LVMI by linear regression among incident hemodialysis participants stratified by ethnicity. Table S6: Association of preload and afterload measures with LVMI by linear regression among incidenthemodialysis participants stratified by 3 month average IDWG groups. Table S7: Association of preload and afterload measures with LVMI by linear regression among incident hemodialysis participants stratified by Î˛-blocker medication. Table S8: Association of preload and afterload measures with LVMI by linear regression among incident hemodialysis participants stratified by renin-angiotensin-aldosterone system (RAAS) blockade use. Table S9: Association of preload and afterload measures with LVMI by linear regression among incident hemodialysis participants stratified by history of congestive heart failure. Table S10: Association of hemoglobin with LVMI by linear regression among incident hemodialysis participants. (DOCX 97 kb)
Additional file 5: Figure S4. of Genome-wide methylation profiling of ovarian cancer patient-derived xenografts treated with the demethylating agent decitabine identifies novel epigenetically regulated genes and pathways
Creators: name: Tushar Tomar
name: Jong, Steven De
name: Alkema, Nicolette
name: Rieks Hoekman
name: Meersma, Gert
name: Klip, Harry
name: Zee, Ate
name: G. Wisman
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Cell Biology
subject: Genetics
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Developmental Biology
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences

description: a Change in tumor growth (percentages) of PDX-36, -37, and -56 during treatment with DAC (2.5 mg/kg, thrice per week) or vehicle for 4 weeks (n = 3 mice per group). b Comparative analysis of significant differentially methylated CpG sites among DAC-treated PDX tumors over samples from all generations. This analysis revealed 40,769 CpG sites that remained stably methylated over all generations (F0, F1, F2, and F3) and can be significantly demethylated by DAC treatment. c Comparative analysis of significant differentially methylated CpG sites (p <0.01) among DAC-treated PDX tumors over altered CpG sites (∆β value > 0.﻿3) of DAC-treated SKOV3 cells. We used stringent criteria (∆β value > 0.﻿3) for altered CpG sites for DAC-treated SKOV3 in order to select better candidate genes for further analysis. (PDF 605 kb)