cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Additional file 2 of Nanoparticle-complexed antimiRs for inhibiting tumor growth and metastasis in prostate carcinoma and melanoma
Creators: name: Kunz, Manfred
name: Brandl, Madeleine
name: Animesh Bhattacharya
name: Nobereit-Siegel, Lars
name: Ewe, Alexander
name: Weirauch, Ulrike
name: Hering, Doreen
name: Reinert, Anja
name: Kalwa, Hermann
name: Guzman, Juan
name: Weigelt, Katrin
name: Wach, Sven
name: Taubert, Helge
name: Aigner, Achim
Publisher: name: figshare
Year: 2020
Subjects: subject: Biophysics
subject: Biochemistry
subject: Pharmacology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer

description: Additional file 2: Fig. S2. a Determination of complex stability and antimiR integrity in the presence of FCS and/or RNase. Bands represent the antimiR after the indicated treatments, either uncomplexed (lanes 1–4), complexed (lanes 9–10) or complexed and subsequently released by heparin displacement (lanes 5–8). b The same experiment as in a, with siRNA instead of antimiR for direct comparison. c Complex stability and antimiR integrity in the presence of artificial lysosomal fluid (ALF; experimental procedure as above).
Observability of thermal effects in the Casimir interaction from graphene-coated substrates
Creators: name: Klimchitskaya, G. L.
name: Mostepanenko, V. M.
Publisher: name: arXiv
Year: 2014
Subjects: subject: Quantum Physics (quant-ph)
subject: Other Condensed Matter (cond-mat.other)
subject: FOS: Physical sciences

description: Using the recently proposed theory, we calculate thermal effect in the Casimir interaction from graphene-coated metallic and dielectric substrates. The cases when only one or both of the two parallel plates are coated with graphene are considered. It is shown that the graphene coating does not influence the Casimir interaction between metals, but produces large impact for dielectrics. This impact increases with decreasing static dielectric permittivity of the plate material. The thermal correction to the gradient of the Casimir force between an Au sphere and graphene coated fused silica plate is calculated. It is shown to be significanlty greater than the total experimental error in the recently performed experiment, which is demonstrated to be only one step away from observation of the thermal effect from a graphene-coated substrate at short separation distances. To achieve this goal, one should increase the thickness of the fused silica film from 300 nm to 2000 nm.
description: 13 pages, 4 figures, to appear in Phys. Rev. A; several minor changes are made in accordance to the Journal version
Isodrastic Magnetic fields for suppressing transitions in guiding-centre motion
Creators: name: Burby, J. W.
name: MacKay, R. S.
name: Naik, S.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Plasma Physics (physics.plasm-ph)
subject: Dynamical Systems (math.DS)
subject: FOS: Physical sciences
subject: FOS: Mathematics

description: In a magnetic field, transitions between classes of guiding-centre motion can lead to cross-field diffusion and escape. We say a magnetic field is isodrastic if guiding centres make no transitions between classes of motion. Therefore, this is an important ideal for enhancing confinement. First, we present a weak formulation, based on the longitudinal adiabatic invariant, generalising omnigenity. To demonstrate that isodrasticity is strictly more general than omnigenity, we construct weakly isodrastic mirror fields that are not omnigenous. Then we present a strong formulation that is exact for guiding-centre motion. We develop a first-order treatment of the strong version via a Melnikov function and show that it recovers the weak version. The theory provides quantification of deviations from isodrasticity that can be used as objective functions in optimal design. The theory is illustrated on some simple examples.
description: 74 pages, 30 Figures, v2.0
Explicit expressions for a family of Bell polynomials and derivatives of some functions
Creators: name: Qi, Feng
name: Zheng, Miao-Miao
Publisher: name: arXiv
Year: 2014
Subjects: subject: Classical Analysis and ODEs (math.CA)
subject: Combinatorics (math.CO)
subject: Number Theory (math.NT)
subject: FOS: Mathematics
subject: 11B83, 26A06, 26A09, 26A24, 26C05, 26C99, 33B90

description: In the paper, the authors first inductively establish explicit formulas for derivatives of the arc sine function, then derive from these explicit formulas explicit expressions for a family of Bell polynomials related to the square function, and finally apply these explicit expressions to find explicit formulas for derivatives of some elementary functions.
description: 16 pages
Additional file 2 of Assessment of the psychosocial and economic impact according to sex in non-small cell lung cancer patients: an exploratory longitudinal study
Creators: name: Viñolas, N. Nuria
name: Garcia-Campelo, Rosario
name: Majem, Margarita
name: Carcereny, Enric
name: Isla, Dolores
name: Gonzalez-Larriba, José Luis
name: Coves, Juan
name: De-Castro, Javier
name: Domine, Manuel
name: Piar Lianes
name: Artal, Angel
name: Remon, Jordi
name: Felip, Enriqueta
name: Garrido, Pilar
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy

description: Additional file 2. Online Resource 2: Social support (Duke-UNC-11 scale) by sex over time.
Power asymmetry in WMAP and Planck temperature sky maps as measured by a local variance estimator
Creators: name: Akrami, Y.
name: Fantaye, Y.
name: Shafieloo, A.
name: Eriksen, H. K.
name: Hansen, F. K.
name: Banday, A. J.
name: Górski, K. M.
Publisher: name: arXiv
Year: 2014
Subjects: subject: Cosmology and Nongalactic Astrophysics (astro-ph.CO)
subject: Data Analysis, Statistics and Probability (physics.data-an)
subject: FOS: Physical sciences

description: We revisit the question of hemispherical power asymmetry in the WMAP and Planck temperature sky maps by measuring the local variance over the sky and on disks of various sizes. For the 2013 Planck sky map we find that none of the 1000 available isotropic Planck "Full Focal Plane" simulations have a larger variance asymmetry than that estimated from the data, suggesting the presence of an anisotropic signature formally significant at least at the $3.3σ$ level. For the WMAP 9-year data we find that 5 out of 1000 simulations have a larger asymmetry. The preferred direction for the asymmetry from the Planck data is $(l,b)=(212^\circ,-13^\circ)$, in good agreement with previous reports of the same hemispherical power asymmetry.
description: 7 pages, 3 figures; text added in response to referee's comments; matches version published in ApJL
A Configurable Protocol for Quantum Entanglement Distribution to End Nodes
Creators: name: Bacciottini, Leonardo
name: Lenzini, Luciano
name: Mingozzi, Enzo
name: Anastasi, Giuseppe
Publisher: name: arXiv
Year: 2022
Subjects: subject: Networking and Internet Architecture (cs.NI)
subject: FOS: Computer and information sciences

description: The primary task of a quantum repeater network is to deliver entanglement among end nodes. Most of existing entanglement distribution protocols do not consider purification, which is thus delegated to an upper layer. This is a major drawback since, once an end-to-end entangled connection (or a portion thereof) is established it cannot be purified if its fidelity (F) does not fall within an interval bounded by Fmin (greater than 0.5) and Fmax (less than 1). In this paper, we propose the Ranked Entanglement Distribution Protocol (REDiP), a connection-oriented protocol that overcomes the above drawback. This result was achieved by including in our protocol two mechanisms for carrying out jointly purification and entanglement swapping. We use simulations to investigate the impact of these mechanisms on the performance of a repeater network, in terms of throughput and fidelity. Moreover, we show how REDiP can easily be configured to implement custom entanglement swapping and purification strategies, including (but not restricted to) those adopted in two recent works.
description: 6 pages, 6 figures, accepted for publication at IEEE ICC 2023
Hierarchical Proxy Modeling for Improved HPO in Time Series Forecasting
Creators: name: Jati, Arindam
name: Ekambaram, Vijay
name: Pal, Shaonli
name: Quanz, Brian
name: Gifford, Wesley M.
name: Harsha, Pavithra
name: Siegel, Stuart
name: Mukherjee, Sumanta
name: Narayanaswami, Chandra
Publisher: name: arXiv
Year: 2022
Subjects: subject: Machine Learning (cs.LG)
subject: Artificial Intelligence (cs.AI)
subject: FOS: Computer and information sciences

description: Selecting the right set of hyperparameters is crucial in time series forecasting. The classical temporal cross-validation framework for hyperparameter optimization (HPO) often leads to poor test performance because of a possible mismatch between validation and test periods. To address this test-validation mismatch, we propose a novel technique, H-Pro to drive HPO via test proxies by exploiting data hierarchies often associated with time series datasets. Since higher-level aggregated time series often show less irregularity and better predictability as compared to the lowest-level time series which can be sparse and intermittent, we optimize the hyperparameters of the lowest-level base-forecaster by leveraging the proxy forecasts for the test period generated from the forecasters at higher levels. H-Pro can be applied on any off-the-shelf machine learning model to perform HPO. We validate the efficacy of our technique with extensive empirical evaluation on five publicly available hierarchical forecasting datasets. Our approach outperforms existing state-of-the-art methods in Tourism, Wiki, and Traffic datasets, and achieves competitive result in Tourism-L dataset, without any model-specific enhancements. Moreover, our method outperforms the winning method of the M5 forecast accuracy competition.
Additional file 1 of Assessment of the psychosocial and economic impact according to sex in non-small cell lung cancer patients: an exploratory longitudinal study
Creators: name: Viñolas, N. Nuria
name: Garcia-Campelo, Rosario
name: Majem, Margarita
name: Carcereny, Enric
name: Isla, Dolores
name: Gonzalez-Larriba, José Luis
name: Coves, Juan
name: De-Castro, Javier
name: Domine, Manuel
name: Piar Lianes
name: Artal, Angel
name: Remon, Jordi
name: Felip, Enriqueta
name: Garrido, Pilar
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Physiology
subject: FOS: Biological sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy

description: Additional file 1. Online Resource 1: Family functionality (APGAR questionnaire) by sex over time.
Additional file 1 of Spatial and temporal influence of rainfall on crustal pore pressure based on seismic velocity monitoring
Creators: name: Rezkia Dewi Andajani
name: Tsuji, Takeshi
name: Snieder, Roel
name: Ikeda, Tatsunori
Publisher: name: figshare
Year: 2020
Subjects: subject: Geophysics
subject: FOS: Earth and related environmental sciences

description: Additional file 1: Figure S1. (a) Map of seismic stations. (b) The power spectra of seismic velocity changes, precipitation events, sea-level changes, and atmospheric pressure changes for the 0–0.5 cycle/day frequency band for the seismic station shown in red of panel (a). Precipitation is averaged around the seismic station, and sea level and atmospheric pressure are taken from the closest sea-level and pressure gauges. (c) The shape of weighting functions of the band-pass filter for selected frequencies defined between four points (f1 = 0.0073, f2 = 0.0082, f3 = 0.03, and f4 = 0.05 cycle/day). (d) The band-pass filter applied to the power spectra. The unshaded parts of the power spectra were used in the analysis. The peaks with the lowest frequency represent annual or quasi-annual cycles. Figure S2. Depth sensitivity of surface wave (Rayleigh wave) to S-wave velocity. The surface wave sensitivity to S-wave was calculated by DISPER80 (Saito 1998) for 1D velocity layer model at the Chugoku region (Nishida et al. 2008). The amplitudes were normalized by the maximum sensitivity of frequency 0.9 Hz. Figure S3. Comparison of moving averaged seismic velocity changes and the calculated pore pressure at the seismic stations of A and B. The top panel indicates the moving averaged seismic velocity change. The middle panel shows the comparison of precipitation and pore pressure. The bottom panel represents the correlation coefficient between averaged seismic velocity change and pore pressure. The signals are normalized.
Transport in strained graphene: Interplay of Abelian and axial magnetic fields
Creators: name: Ahmed, Aqeel
name: Das, Sanjib Kumar
name: Roy, Bitan
Publisher: name: arXiv
Year: 2022
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: Immersed in external magnetic fields ($B$), buckled graphene constitutes an ideal tabletop setup, manifesting a confluence of time-reversal symmetry (${\mathcal T}$) breaking Abelian ($B$) and ${\mathcal T}$-preserving strain-induced internal axial ($b$) magnetic fields. In such a system, here we numerically compute two-terminal conductance ($G$), and four- as well as six-terminal Hall conductivity ($σ_{xy}$) for spinless fermions. On a flat graphene ($b=0$), the $B$ field produces quantized plateaus at $G=\pm |σ_{xy}|=(2n+1) e^2/h$, where $n=0,1,2, \cdots$. The strain induced $b$ field lifts the two-fold valley degeneracy of higher Landau levels and leads to the formation of additional even-integer plateaus at $G=\pm |σ_{xy}|= (2,4,\cdots)e^2/h$, when $B>b$. While the same sequence of plateaus is observed for $G$ when $b>B$, the numerical computation of $σ_{xy}$ in Hall bar geometries in this regime becomes unstable. A plateau at $G=σ_{xy}=0$ always appears with the onset of a charge-density-wave order, causing a staggered pattern of fermionic density between two sublattices of the honeycomb lattice.
description: Published version in PRB: 7 pages, 4 figures: Supplemental Material as Ancillary file
Microwave-induced conductance replicas in hybrid Josephson junctions without Floquet-Andreev states
Creators: name: Haxell, D. Z.
name: Coraiola, M.
name: Sabonis, D.
name: Hinderling, M.
name: Kate, S. C. ten
name: Cheah, E.
name: Krizek, F.
name: Schott, R.
name: Wegscheider, W.
name: Belzig, W.
name: Cuevas, J. C.
name: Nichele, F.
Publisher: name: arXiv
Year: 2022
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Superconductivity (cond-mat.supr-con)
subject: FOS: Physical sciences

description: Light-matter interaction enables engineering of non-equilibrium quantum systems. In condensed matter, spatially and temporally cyclic Hamiltonians are expected to generate energy-periodic Floquet states, with properties inaccessible at thermal equilibrium. A recent work explored the tunnelling conductance of a planar Josephson junction under microwave irradiation, and interpreted replicas of conductance features as evidence of steady Floquet-Andreev states. Here we realise a similar device in a hybrid superconducting-semiconducting heterostructure, which utilises a tunnelling probe with gate-tunable transparency and allows simultaneous measurements of Andreev spectrum and current-phase relation of the planar Josephson junction. We show that, in our devices, spectral replicas in sub-gap conductance emerging under microwave irradiation are caused by photon assisted tunnelling of electrons into Andreev states. The current-phase relation under microwave irradiation is also explained by the interaction of Andreev states with microwave photons, without the need to invoke Floquet states. The techniques outlined in this study establish a baseline to distinguish photon assisted tunnelling from Floquet-Andreev states in mesoscopic devices, a crucial development towards understanding light-matter coupling in hybrid nanostructures.
title: Stadtklimatologie im Wandel der Zeit – Einblicke aus Deutschland, Österreich und der Schweiz
Creators: name: Kuttler, Wilhelm
name: Hollósi, Brigitta
name: Gubler, Moritz
Publisher: name: Deutscher Wetterdienst (DWD)
Year: 2023

description: Dieser Beitrag zeichnet die Entwicklung der wissenschaftlichen Beschäftigung mit dem Klima und der Luftqualität von Städten in kurzen, exemplarischen Zügen nach. Die Quellenlage lässt eine Analyse der etwa über 2000-jährigen Geschichte der Stadtklimaforschung zu. Es dürften wohl indische und römische Kulturen gewesen sein, die sich dem Problem der Überwärmung und insbesondere dem der Luftverschmutzung in ihren aufstrebenden städtischen Siedlungen zuerst annahmen. Zu Beginn dieses Artikels wird im Rahmen einer internationalen Gesamtschau ein kurzer Abriss dieses Teilgebiets der Umweltmeteorologie gegeben. Anschließend wird die lebhafte Geschichte der Stadtklimaforschung für Deutschland, Österreich und die Schweiz (Akronym: D-A-CH) an zahlreichen Beispielen und Meilensteinen der Entwicklung referiert.
description: This article reviews the development of scientific research on climate and air quality in cities in short, exemplary sections. The literature allows for an analysis of the 2000-year history of urban climate research. Probably the Indian and Roman cultures were the first who addressed the problem of overheating and especially that of air pollution in their emerging urban settlements. At the beginning of this article, a brief outline of this branch of environmental meteorology is given as part of an overall international review. Subsequently, the lively history of urban climate research for Germany, Austria, and Switzerland (acronym: D-A-CH) will be reported using numerous examples and milestones of its development.
Social Bootstrapping: How Pinterest and Last.fm Social Communities Benefit by Borrowing Links from Facebook
Creators: name: Zhong, Changtao
name: Salehi, Mostafa
name: Shah, Sunil
name: Cobzarenco, Marius
name: Sastry, Nishanth
name: Cha, Meeyoung
Publisher: name: arXiv
Year: 2014
Subjects: subject: Social and Information Networks (cs.SI)
subject: Computers and Society (cs.CY)
subject: Physics and Society (physics.soc-ph)
subject: FOS: Computer and information sciences
subject: FOS: Physical sciences
subject: H.3.5; J.4

description: How does one develop a new online community that is highly engaging to each user and promotes social interaction? A number of websites offer friend-finding features that help users bootstrap social networks on the website by copying links from an established network like Facebook or Twitter. This paper quantifies the extent to which such social bootstrapping is effective in enhancing a social experience of the website. First, we develop a stylised analytical model that suggests that copying tends to produce a giant connected component (i.e., a connected community) quickly and preserves properties such as reciprocity and clustering, up to a linear multiplicative factor. Second, we use data from two websites, Pinterest and Last.fm, to empirically compare the subgraph of links copied from Facebook to links created natively. We find that the copied subgraph has a giant component, higher reciprocity and clustering, and confirm that the copied connections see higher social interactions. However, the need for copying diminishes as users become more active and influential. Such users tend to create links natively on the website, to users who are more similar to them than their Facebook friends. Our findings give new insights into understanding how bootstrapping from established social networks can help engage new users by enhancing social interactivity.
description: Proc. 23rd International World Wide Web Conference (WWW), 2014
Fermion Scattering in a Gravitational Background: Electroweak Corrections and Flavour Transitions
Creators: name: Coriano, Claudio
name: Rose, Luigi Delle
name: Gabrielli, Emidio
name: Trentadue, Luca
Publisher: name: arXiv
Year: 2013
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: We investigate the role of the electroweak corrections to the scattering cross section of Standard Model fermions with gravity. We use both an approach of scattering off an external potential, where the gravitational field is treated as a classical background generated by a heavy source, and the usual interaction based on the one-graviton-exchange. In the potential appoach we consider the fields both of a localized and of a distributed gravitational source of spherical symmetry and uniform density, separating the cases of interactions taking place both in the inner and external regions of the source. This allows to make a distinction between interactions involving neutrinos and dark matter particles with a realistic gravity source, which cover the inner region, and the rest of the Standard model fermions. The role of the gravitationally induced flavour-changing transitions, as well as the flavour diagonal ones, are investigated in the limit of both large and small momentum transfers, deriving the structure of the corresponding Hamiltonian.
description: 36 pages, 3 figures
Additional file 2 of Assessing knowledge of healthcare providers concerning cardiovascular risk after hypertensive disorders of pregnancy: an Australian national survey
Creators: name: Roth, Heike
name: Homer, Caroline S. E.
name: Arnott, Clare
name: Roberts, Lynne
name: Brown, Mark
name: Henry, Amanda
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Cell Biology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 2. Risk factor knowledge by profession and by pregnancy HDP (PE or GH) in numbers and proportions. Shows detailed breakdown of respondent answers, including proportion answering ‘I don’t know’ or skipping questions versus giving a firm but incorrect answer.
Additional file 1 of Assessing knowledge of healthcare providers concerning cardiovascular risk after hypertensive disorders of pregnancy: an Australian national survey
Creators: name: Roth, Heike
name: Homer, Caroline S. E.
name: Arnott, Clare
name: Roberts, Lynne
name: Brown, Mark
name: Henry, Amanda
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Cell Biology
subject: Biotechnology
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences

description: Additional file 1. Long-term health after gestational hypertension or preeclampsia - Health Care Provider Survey. Custom-created survey for the purpose of this study.
Inversion of Bayesian Networks
Creators: name: van Oostrum, Jesse
name: van Hintum, Peter
name: Ay, Nihat
Publisher: name: arXiv
Year: 2022
Subjects: subject: Machine Learning (cs.LG)
subject: Artificial Intelligence (cs.AI)
subject: Machine Learning (stat.ML)
subject: FOS: Computer and information sciences

description: Variational autoencoders and Helmholtz machines use a recognition network (encoder) to approximate the posterior distribution of a generative model (decoder). In this paper we study the necessary and sufficient properties of a recognition network so that it can model the true posterior distribution exactly. These results are derived in the general context of probabilistic graphical modelling / Bayesian networks, for which the network represents a set of conditional independence statements. We derive both global conditions, in terms of d-separation, and local conditions for the recognition network to have the desired qualities. It turns out that for the local conditions the property perfectness (for every node, all parents are joined) plays an important role.
Additional file 1 of Content validity of a sleep numerical rating scale and a sleep diary in adults and adolescents with moderate-to-severe atopic dermatitis
Creators: name: Dias-Barbosa, Carla
name: Matos, Rodolfo
name: Vernon, Margaret
name: Carney, Colleen E.
name: Krystal, Andrew
name: Puelles, Jorge
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Neuroscience
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: Science Policy
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1.
Sexual Harassment of Women: Climate, Culture, and Consequences in Academic Sciences, Engineering, and Medicine
Publisher: name: Online Ethics Center
Year: 2018
Subjects: Discrimination in the Workplace
Diversity
Employer/Employee Relationships
Ethics and Society
Lab and Workplace Safety
Organizational Climate
Public Well-being
Research and Practice
Safety
Social Responsibility
Workplace Ethics

description: Link to National Academies reportSexual Harassment of Women: Climate, Culture, and Consequences in Academic Sciences, Engineering, and Medicine.
Additional file 7 of A full-length transcriptome and gene expression analysis reveal genes and molecular elements expressed during seed development in Gnetum luofuense
Creators: name: Deng, Nan
name: Hou, Chen
name: Boxiang He
name: Fengfeng Ma
name: Qingan Song
name: Shengqing Shi
name: Caixia Liu
name: Tian, Yuxin
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 7: Table S5. Detail information of genome mapping of the transcriptome from the six G. luofuense seed samples.
Gaussian Process Priors for Systems of Linear Partial Differential Equations with Constant Coefficients
Creators: name: Härkönen, Marc
name: Lange-Hegermann, Markus
name: Raiţă, Bogdan
Publisher: name: arXiv
Year: 2022
Subjects: subject: Machine Learning (stat.ML)
subject: Machine Learning (cs.LG)
subject: Numerical Analysis (math.NA)
subject: Commutative Algebra (math.AC)
subject: FOS: Computer and information sciences
subject: FOS: Mathematics
subject: 60G15, 13N10, 13P25, 60-08, 35G35

description: Partial differential equations (PDEs) are important tools to model physical systems and including them into machine learning models is an important way of incorporating physical knowledge. Given any system of linear PDEs with constant coefficients, we propose a family of Gaussian process (GP) priors, which we call EPGP, such that all realizations are exact solutions of this system. We apply the Ehrenpreis-Palamodov fundamental principle, which works as a non-linear Fourier transform, to construct GP kernels mirroring standard spectral methods for GPs. Our approach can infer probable solutions of linear PDE systems from any data such as noisy measurements, or pointwise defined initial and boundary conditions. Constructing EPGP-priors is algorithmic, generally applicable, and comes with a sparse version (S-EPGP) that learns the relevant spectral frequencies and works better for big data sets. We demonstrate our approach on three families of systems of PDEs, the heat equation, wave equation, and Maxwell's equations, where we improve upon the state of the art in computation time and precision, in some experiments by several orders of magnitude.
description: 26 pages, 8 figures; ICML 2023 (oral); updated with expanded appendices and ancillary files. Code available at https://github.com/haerski/EPGP. For animations, see https://mathrepo.mis.mpg.de/EPGP/index.html. For a presentation see https://icml.cc/virtual/2023/oral/25571. The paper and all ancillary files are released under CC-BY
Additional file 6 of A full-length transcriptome and gene expression analysis reveal genes and molecular elements expressed during seed development in Gnetum luofuense
Creators: name: Deng, Nan
name: Hou, Chen
name: Boxiang He
name: Fengfeng Ma
name: Qingan Song
name: Shengqing Shi
name: Caixia Liu
name: Tian, Yuxin
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 6: Table S4. Detail information of Illumina sequenced data from the six G. luofuense seed samples.
Dark Matter Heating and Early Core Formation in Dwarf Galaxies
Creators: name: Madau, Piero
name: Shen, Sijing
name: Governato, Fabio
Publisher: name: arXiv
Year: 2014
Subjects: subject: Astrophysics of Galaxies (astro-ph.GA)
subject: FOS: Physical sciences

description: We present more results from a fully cosmological LCDM simulation of a group of isolated dwarf galaxies that has been shown to reproduce the observed stellar mass and cold gas content, resolved star formation histories, and metallicities of dwarfs in the Local Volume. Here we investigate the energetics and timetable of the cusp-core transformation. As suggested by previous work, supernova-driven gas outflows remove dark matter (DM) cusps and create kpc-size cores in all systems having a stellar mass above 1e6 Msun. The "DM core mass removal efficiency" -- dark mass ejected per unit stellar mass -- ranges today from a few to a dozen, and increases with decreasing host mass. Because dwarfs form the bulk of their stars prior to redshift 1 and the amount of work required for DM heating and core formation scales approximately as Mvir^{5/3}, the unbinding of the DM cusp starts early and the formation of cored profiles is not as energetically onerous as previously claimed. DM particles in the cusp typically migrate to 2-3 core radii after absorbing a few percent of the energy released by supernovae. The present-day slopes of the inner dark matter mass profiles, Gamma=d log M/dlog R=2.5-3, of the simulated "Bashful" and "Doc" dwarfs are similar to those measured in the luminous Fornax and Sculptor dwarf spheroidals. None of the simulated galaxies has a circular velocity profile exceeding 20 km/s in the inner 1 kpc, implying that supernova feedback is key to solve the "too-big-to-fail" problem for Milky Way subhalos.
description: 7 pages, 4 figures, accepted for publication in the Astrophysical Journal Letters
Additional file 5 of A full-length transcriptome and gene expression analysis reveal genes and molecular elements expressed during seed development in Gnetum luofuense
Creators: name: Deng, Nan
name: Hou, Chen
name: Boxiang He
name: Fengfeng Ma
name: Qingan Song
name: Shengqing Shi
name: Caixia Liu
name: Tian, Yuxin
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 5: Table S3. Summary of annotated numbers of novel genes by the six databases.
Additional file 1 of Virulent secondary metabolites of entomopathogenic bacteria genera, Xenorhabdus and Photorhabdus, inhibit phospholipase A2 to suppress host insect immunity
Creators: name: Md. Mahi Imam Mollah
name: Kim, Yonggyun
Publisher: name: figshare
Year: 2020
Subjects: subject: Microbiology
subject: FOS: Biological sciences

description: Additional file 1: Table S1. Insecticidal activities of four organic extracts of culture broth of 14 entomopathogenic bacteria (EPB) of Xenorhabdus and Photorhabdus against L5 larvae of S. exigua. The bioassay was carried out by injecting 3 μL of bacterial culture broth extracts from different concentrations into the hemocoel of L5 larva. Each treatment dose used 10 larvae and each treatment replicated three times. Table S2. GC-MS prediction of secondary metabolites in organic extracts of bacterial culture broth from 14 species of Xenorhabdus and Photorhabdus. Table S3. Secondary metabolites predicted from Photorhabdus temperata temperata (Ptt), Xenorhabdus hominickii (Xh) and Xenorhabdus ehlersii (Xe) which were used for biological activity analysis. Figure S1. Chromatograms from the GC-MS analysis of the organic extracts of 14 bacterial culture broths for the prediction of bacterial metabolites. Four organic solvents such as hexane, ethyl acetate, chloroform and butanol were used to get organic extracts ‘HEX’, ‘EAX’, ‘CX’ and ‘BX’ from the bacteria, Photorhabdus temperata Subsp. temperata ANU101 (‘Ptt’), Xenorhabdus hominickii ANU101 (‘Xh’), X. nematophila K1 (‘XnK1’), X. ehlersii KSY (‘Xe’),, X. nematophila SK1 (‘XnSK1’), X. nematophila SK2 (‘XnSK2’), Photorhabdus luminescens KACC12123 (‘Pl 193’), P. luminescens subsp. laumondii KACC12283 (‘Pl laum’), P. luminescens subsp. 2 thracensis KACC12284 (‘Pl thra’), X. nematophila KACC12145 (‘Xn12145’), X. nematophila Mexico (‘XnM’), X. nematophila France (‘XnF’), X. bovienii (‘Xb’), and X. poinarii (‘Xp’). The extracts were dried using rotary evaporator and the resulting product was dissolved in methanol. After filtration, the sample was used for GC analysis and MS recording. NIST 11 database were used to predict compounds based on mass spectra. X axis indicates the retention time in min.
Additional file 4 of A full-length transcriptome and gene expression analysis reveal genes and molecular elements expressed during seed development in Gnetum luofuense
Creators: name: Deng, Nan
name: Hou, Chen
name: Boxiang He
name: Fengfeng Ma
name: Qingan Song
name: Shengqing Shi
name: Caixia Liu
name: Tian, Yuxin
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 4: Table S2. Detail information in PacBio sequencing data corrected by Illumina sequencing data.
Counterexamples to the Kotani-Last Conjecture for Continuum Schrödinger Operators via Character-Automorphic Hardy Spaces
Creators: name: Damanik, David
name: Yuditskii, Peter
Publisher: name: arXiv
Year: 2014
Subjects: subject: Spectral Theory (math.SP)
subject: Mathematical Physics (math-ph)
subject: Dynamical Systems (math.DS)
subject: FOS: Mathematics
subject: FOS: Physical sciences

description: The Kotani-Last conjecture states that every ergodic operator in one space dimension with non-empty absolutely continuous spectrum must have almost periodic coefficients. This statement makes sense in a variety of settings; for example, discrete Schrödinger operators, Jacobi matrices, CMV matrices, and continuum Schrödinger operators. In the main body of this paper we show how to construct counterexamples to the Kotani-Last conjecture for continuum Schrödinger operators by adapting the approach developed by Volberg and Yuditskii to construct counterexamples to the Kotani-Last conjecture for Jacobi matrices. This approach relates the reflectionless operators associated with the prescribed spectrum to a family of character-automorphic Hardy spaces and then relates the shift action on the space of operators to the resulting action on the associated characters. The key to our approach is an explicit correspondence between the space of continuum reflectionless Schrödinger operators associated with a given set and the space of reflectionless Jacobi matrices associated with a derived set. Once this correspondence is established we can rely to a large extent on the previous work of Volberg and Yuditskii to produce the resulting action on the space of characters. We analyze this action and identify situations where we can observe absolute continuity without almost periodicity. In the appendix we show how to implement this strategy and obtain analogous results for extended CMV matrices.
description: 35 pages
Additional file 3 of A full-length transcriptome and gene expression analysis reveal genes and molecular elements expressed during seed development in Gnetum luofuense
Creators: name: Deng, Nan
name: Hou, Chen
name: Boxiang He
name: Fengfeng Ma
name: Qingan Song
name: Shengqing Shi
name: Caixia Liu
name: Tian, Yuxin
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 3: Table S1. Detail information in the processing of PacBio sequencing data.
Additional file 2 of A full-length transcriptome and gene expression analysis reveal genes and molecular elements expressed during seed development in Gnetum luofuense
Creators: name: Deng, Nan
name: Hou, Chen
name: Boxiang He
name: Fengfeng Ma
name: Qingan Song
name: Shengqing Shi
name: Caixia Liu
name: Tian, Yuxin
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 2: Fig. S2. Annotation summary of novel genes from G. luofuense seeds. a The distribution of NR annotations among different seed plant species, the x-axis represents the number of annotated reads. b KEGG enrichment of the annotated novel genes, the x-axis represents the number of annotated reads. c Gene ontology (GO) annotation and categorization of full-length transcripts.
Anyon statistics through conductance measurements of time-domain interferometry
Creators: name: Schiller, Noam
name: Shapira, Yotam
name: Stern, Ady
name: Oreg, Yuval
Publisher: name: arXiv
Year: 2023
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: Strongly Correlated Electrons (cond-mat.str-el)
subject: FOS: Physical sciences

description: We propose a method to extract the mutual exchange statistics of the anyonic excitations of a general Abelian fractional quantum Hall state, by comparing the tunneling characteristics of a quantum point contact in two different experimental conditions. In the first, the tunneling current between two edges at different chemical potentials is measured. In the second, one of these edges is strongly diluted by an earlier point contact. We describe the case of the dilute beam in terms of a time-domain interferometer between the anyons flowing along the edge and quasiparticle-quasihole excitations created at the tunneling quantum point contact. In both cases, temperature is kept large, such that the measured current is given to linear response. Remarkably, our proposal does not require the measurement of current correlations, and allows us to carefully separate effects of the fractional charge and statistics from effects of intra- and inter-edge interactions.
description: 5+5 pages, 2 figures
Framework for Addressing Ethical Dimensions of Emerging and Innovative Biomedical Technologies: A Synthesis of Relevant National Academies Reports
Publisher: name: Online Ethics Center
Year: 2020
Subjects: Emerging Technologies
Ethics and Society

description: Over the past 15 years, the National Academies of Sciences, Engineering, and Medicine (the National Academies) have convened multiple committees of leading experts to address ethical challenges related to innovative and emerging biomedical technologies. After reviewing prior National Academies' reports, individual ethics principles and considerations were identified and grouped into sets of related considerations to establish guidelines for future studies.

Framework for Addressing Ethical Dimensions of Emerging and Innovative Biomedical Technologiesprovides a synopsis of principal ethical commitments and core values that characterize the National Academies' work in the domain of emerging biomedical technologies. This publication offers a synthesis of relevant National Academies' reports.

Read Framework for Addressing Ethical Dimensions of Emerging and Innovative Biomedical Technologies: A Synthesis of Relevant National Academies Reports
Critical gradient turbulence optimization toward a compact stellarator reactor concept
Creators: name: Roberg-Clark, G. T.
name: Plunk, G. G.
name: Xanthopoulos, P.
name: Nührenberg, C.
name: Henneberg, S. A.
name: Smith, H. M.
Publisher: name: arXiv
Year: 2023
Subjects: subject: Plasma Physics (physics.plasm-ph)
subject: FOS: Physical sciences

description: Integrating turbulence into stellarator optimization is shown by targeting the onset for the ion-temperature-gradient mode, highlighting effects of parallel connection length, local magnetic shear, and flux surface expansion. The result is a compact quasihelically symmetric stellarator configuration, admitting a set of uncomplicated coils, with significantly reduced turbulent heat fluxes compared to a known stellarator. The new configuration combines low values of neoclassical transport, good alpha particle confinement, and Mercier stability at a plasma beta of almost 2$\%$.
description: 5 pages, 5 figures. Phys. Rev. Research 5, L032030 (2023)
Additional file 1 of A full-length transcriptome and gene expression analysis reveal genes and molecular elements expressed during seed development in Gnetum luofuense
Creators: name: Deng, Nan
name: Hou, Chen
name: Boxiang He
name: Fengfeng Ma
name: Qingan Song
name: Shengqing Shi
name: Caixia Liu
name: Tian, Yuxin
Publisher: name: figshare
Year: 2020
Subjects: subject: Genetics
subject: FOS: Biological sciences

description: Additional file 1: Fig. S1. Statistics and quality control of full-length transcripts. a Length distribution of subreads. b Length distribution of FLNCs. c length distribution of consensus isoforms using an isoform-level clustering algorithm. d Statistics and classification of full-length transcripts against the G. luofuense reference genome. e Mapping read density on the G. luofuense scaffolds; the x-axis represents the scaffold position (Mb), the y-axis represents the median read density (log2), and the green and red lines represent the positive and negative strands of the scaffolds, respectively. f The scale and identity range of all mapped full-length transcripts. The red and blue bars represent the coverage and identity of full-length reads, respectively.
Using stochastic acceleration to place experimental limits on the charge of antihydrogen
Creators: name: Baquero-Ruiz, M.
name: Charman, A. E.
name: Fajans, J.
name: Little, A.
name: Povilus, A.
name: Robicheaux, F.
name: Wurtele, J. S.
name: Zhmoginov, A. I.
Publisher: name: arXiv
Year: 2014
Subjects: subject: Atomic Physics (physics.atom-ph)
subject: FOS: Physical sciences

description: Assuming hydrogen is charge neutral, CPT invariance demands that antihydrogen also be charge neutral. Quantum anomaly cancellation also demands that antihydrogen be charge neutral. Standard techniques based on measurements of macroscopic quantities of atoms cannot be used to measure the charge of antihydrogen. In this paper, we describe how the application of randomly oscillating electric fields to a sample of trapped antihydrogen atoms, a form of stochastic acceleration, can be used to place experimental limits on this charge.
Preserving positive intermediate curvature
Creators: name: Chow, Tsz-Kiu Aaron
name: Johne, Florian
name: Wan, Jingbo
Publisher: name: arXiv
Year: 2023
Subjects: subject: Differential Geometry (math.DG)
subject: FOS: Mathematics

description: Consider a compact manifold $N$ (with or without boundary) of dimension $n$. Positive $m$-intermediate curvature interpolates between positive Ricci curvature ($m = 1$) and positive scalar curvature ($m = n-1$), and it is obstructed on partial tori $N^n = M^{n-m} \times \mathbb{T}^m$. Given Riemannian metrics $g, \bar{g}$ on $(N, \partial N)$ with positive $m$-intermediate curvature and $m$-positive difference $h_g - h_{\bar{g}}$ of second fundamental forms we show that there exists a smooth family of Riemannian metrics with positive $m$-intermediate curvature interpolating between $g$ and $\bar{g}$. Moreover, we apply this result to prove a non-existence result for partial torical bands with positive $m$-intermediate curvature and strictly $m$-convex boundaries.
description: final version; the article is published in the Journal of Geometric Analysis
Artificial Intelligence Applications for Older Adults and People with Disabilities - Balancing Safety and Autonomy: Proceedings of a Workshop - in Brief
Publisher: name: Online Ethics Center
Year: 2020
Subjects: Artificial Intelligence and Robotics
Controversies
Ethics and Society
Public Health and Safety
Research and Practice
Safety

description: Link to the National Academies reportArtificial Intelligence Applications for Older Adults and People with Disabilities " Balancing Safety and Autonomy: Proceedings of a Workshop
P.Oxy. inv. 5 1B.44/G(b). Title of a hypomnema
Creators: name: Oxyrhynchus Papyri
Publisher: name: University of Oxford
Year: 2023
Subjects: classificationCode: 470316
subject: Latin and classical Greek languages

description: Reproduction requests: https://www.ees.ac.uk/reproduction-requests-and-fees
Additional file 1 of Radiation therapy alone versus radiation therapy plus radiofrequency ablation/vertebral augmentation for spine metastasis: study protocol for a randomized controlled trial
Creators: name: Kotecha, Rupesh
name: Schiro, Brian J.
name: Sporrer, Justin
name: Muni Rubens
name: Appel, Haley R.
name: Calienes, Kathleen S.
name: Boulanger, Belinda
name: Marietsy V. Pujol
name: Suarez, Deborah T.
name: Pena, Ashley
name: Kudryashev, Alex
name: Minesh P. Mehta
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Biotechnology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer

description: Additional file 1. SPIRIT 2013 Statement: Defined Standard Protocol Items.
Problems related to gauge invariance and momentum, spin decomposition in nucleon structure study
Creators: name: Wang, Fan
name: Sun, W. M.
name: Chen, X. S.
name: Zhang, P. M.
Publisher: name: arXiv
Year: 2013
Subjects: subject: High Energy Physics - Phenomenology (hep-ph)
subject: FOS: Physical sciences

description: How do the quark and gluon share the nucleon momentum? How does the nucleon spin distribute among its constituents? What means the quark and gluon momentum, spin and orbital angular momentum? These problems are analyzed and a solution is proposed based on {\it gauge invariance principle, canonical quantization rule and Poincar$\acute{e}$ covariance}.
description: 10 pages, no figures; acknowledgement for the acceptance as an invited contribution to a special issue of Physics of Elementary Particles and Atomic Nuclei is added
Additional file 1 of Impact of history of myomectomy on preterm birth risk in women with a leiomyomatous uterus: a propensity score analysis
Creators: name: Rault, Emmanuel
name: Delorme, Pierre
name: Goffinet, François
name: Girault, Aude
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: Physiology
subject: FOS: Biological sciences
subject: Pharmacology
subject: Biotechnology
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: 111714 Mental Health
subject: FOS: Health sciences

description: Additional file 1: Table S1. Bivariate analysis comparing women’s preexisting characteristics, pregnancy characteristics and myoma characteristics between women with a preterm birth
Additional file 1 of Ginsenoside ameliorated ventilator-induced lung injury in rats
Creators: name: Cho, Woo Hyun
name: Kim, Yun Hak
name: Heo, Hye Jin
name: Dohyung Kim
name: Kwak, Tae Won
name: Kim, Kwang Ho
name: Yeo, Hye Ju
Publisher: name: figshare
Year: 2020
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Cell Biology
subject: Physiology
subject: Ecology
subject: Immunology
subject: FOS: Clinical medicine
subject: 69999 Biological Sciences not elsewhere classified
subject: Science Policy

description: Additional file 1:. Supplement 1. ELISA kits used in this study.