cometadata/datacite-rtg-text-other-reclassification-records huggingface dataset:
Solutions of Tetrahedron Equation from Quantum Cluster Algebra Associated with Symmetric Butterfly Quiver
Creators: name: Inoue, Rei
name: Kuniba, Atsuo
name: Sun, Xiaoyue
name: Terashima, Yuji
name: Yagi, Junya
Publisher: name: arXiv
Year: 2024
Subjects: subject: Quantum Algebra (math.QA)
subject: High Energy Physics - Theory (hep-th)
subject: Mathematical Physics (math-ph)
subject: Geometric Topology (math.GT)
subject: Exactly Solvable and Integrable Systems (nlin.SI)
subject: FOS: Mathematics
subject: FOS: Physical sciences
subject: 82B23, 81R12, 13F60

description: We construct a new solution to the tetrahedron equation by further pursuing the quantum cluster algebra approach in our previous works. The key ingredients include a symmetric butterfly quiver attached to the wiring diagrams for the longest element of type $A$ Weyl groups and the implementation of quantum $Y$-variables through the $q$-Weyl algebra. The solution consists of four products of quantum dilogarithms. By exploring both the coordinate and momentum representations, along with their modular double counterparts, our solution encompasses various known three-dimensional (3D) $R$-matrices. These include those obtained by Kapranov-Voevodsky (1994) utilizing the quantized coordinate ring, Bazhanov-Mangazeev-Sergeev (2010) from a quantum geometry perspective, Kuniba-Matsuike-Yoneyama (2023) linked with the quantized six-vertex model, and Inoue-Kuniba-Terashima (2023) associated with the Fock-Goncharov quiver. The 3D $R$-matrix presented in this paper offers a unified perspective on these existing solutions, coalescing them within the framework of quantum cluster algebra.
description: Section 2 summarizes standard facts from cluster algebras and effectively overlaps with the corresponding section in arXiv:2310.14529
Additional file 1: of The Intensive Care Lifeboat: a survey of lay attitudes to rationing dilemmas in neonatal intensive care
Creators: name: C. Arora
name: J. Savulescu
name: H. Maslen
name: M. Selgelid
name: D. Wilkinson
Publisher: name: Figshare
Year: 2016
Subjects: subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy

description: Questionnaire. (PDF 533 kb)
Diphasia cristata Billard 1920
Creators: name: Galea, Horia R.
name: Schuchert, Peter
Publisher: name: Zenodo
Year: 2019
Subjects: Biodiversity
Taxonomy
Animalia
Cnidaria
Hydrozoa
Leptothecata
Sertulariidae
Diphasia
Diphasia cristata

description: Diphasia cristata Billard, 1920
Diphasia cristata – Galea 2016: 4, fig. 1C–J.
Material examined
PACIFIC OCEAN • four colonies 2.5–4.5 cm high, two of which bearing female gonothecae; off New Caledonia, stn DW4775; 23°03′ S, 168°17′ E; 140–277 m; 28 Aug. 2016; KANACONO leg.; one colony was used for DNA extraction, DNA 1372; voucher MHNG-INVE- 120833; barcode identifier MK 073095; MNHN-IK-2015-401 • a 4 cm high colony bearing a male gonotheca; off New Caledonia, stn DW4726; 22°40′ S, 167°03′ E; 240– 181 m; 20 Aug. 2016; KANACONO leg.; MNHN-IK-2015-402.
Remarks
The mode of branching is characteristically trifid: each stem gives rise basally to two opposite side branches that become secondary stems; each of these gives rise again, from below their basalmost pair of hydrothecae, to an opposite pair of 2 nd order branches, and the process is repeated again until 4 th order branches are obtained, as observed in material MNHN-IK-2015-401.
Distribution
Philippines, Japan, New Caledonia, Vanuatu, Fiji and Tonga (Galea 2016).
description: Published as part of Galea, Horia R. & Schuchert, Peter, 2019, Some thecate hydroids (Cnidaria: Hydrozoa) from off New Caledonia collected during KANACONO and KANADEEP expeditions of the French Tropical Deep-Sea Benthos Program, pp. 1-70 in European Journal of Taxonomy 562 on page 27, DOI: 10.5852/ejt.2019.562, http://zenodo.org/record/3474305
Additional file 1 of Biomimetic nanodrug blocks CD73 to inhibit adenosine and boosts antitumor immune response synergically with photothermal stimulation
Creators: name: Li, Tan
name: Zhang, Xingyu
name: Shi, Chengyu
name: Liu, Qiao
name: Zhao, Yuetao
Publisher: name: figshare
Year: 2024
Subjects: subject: Immunology
subject: FOS: Clinical medicine

description: Supplementary Material 1
Polypedilum decematoguttatum Tokunaga 1938
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum decematoguttatum

description: decematoguttatum (Tokunaga, 1938): The Philippine Journal of Science, 65: 337 (Chironomus (Polypedilum )).
Type locality. Japan, Shimogamo, Kyoto Prefecture.
Distribution. PA: Japan (Honshu, Kyushu), Korea, OR: China (Fujiang, Yunan, Guizhou, Guangxi).
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 43, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Additional file 2: of Feeding practices and nutrient content of complementary meals in rural central Tanzania: implications for dietary adequacy and nutritional status
Creators: name: Kissa Kulwa
name: Mamiro, Peter
name: Kimanya, Martin
name: Mziray, Rajab
name: Kolsteren, Patrick
Publisher: name: Figshare
Year: 2015
Subjects: subject: Biochemistry
subject: Molecular Biology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Description of ingredients and methods of preparing different types of porridge. (DOC 49Â kb)
From Skepticism to Acceptance: Simulating the Attitude Dynamics Toward Fake News
Creators: name: Liu, Yuhan
name: Chen, Xiuying
name: Zhang, Xiaoqing
name: Gao, Xing
name: Zhang, Ji
name: Yan, Rui
Publisher: name: arXiv
Year: 2024
Subjects: subject: Social and Information Networks (cs.SI)
subject: Artificial Intelligence (cs.AI)
subject: Computation and Language (cs.CL)
subject: FOS: Computer and information sciences

description: In the digital era, the rapid propagation of fake news and rumors via social networks brings notable societal challenges and impacts public opinion regulation. Traditional fake news modeling typically forecasts the general popularity trends of different groups or numerically represents opinions shift. However, these methods often oversimplify real-world complexities and overlook the rich semantic information of news text. The advent of large language models (LLMs) provides the possibility of modeling subtle dynamics of opinion. Consequently, in this work, we introduce a Fake news Propagation Simulation framework (FPS) based on LLM, which studies the trends and control of fake news propagation in detail. Specifically, each agent in the simulation represents an individual with a distinct personality. They are equipped with both short-term and long-term memory, as well as a reflective mechanism to mimic human-like thinking. Every day, they engage in random opinion exchanges, reflect on their thinking, and update their opinions. Our simulation results uncover patterns in fake news propagation related to topic relevance, and individual traits, aligning with real-world observations. Additionally, we evaluate various intervention strategies and demonstrate that early and appropriately frequent interventions strike a balance between governance cost and effectiveness, offering valuable insights for practical applications. Our study underscores the significant utility and potential of LLMs in combating fake news.
description: IJCAI 2024 Oral
Additional file 1 of Photodynamic and nitric oxide therapy-based synergistic antimicrobial nanoplatform: an advanced root canal irrigation system for endodontic bacterial infections
Creators: name: Zeng, Youyun
name: Hu, Xiangyu
name: Cai, Zhibin
name: Qiu, Dongchao
name: Ran, Ying
name: Ding, Yiqin
name: Shi, Jiayi
name: Cai, Xiaojun
name: Pan, Yihuai
Publisher: name: figshare
Year: 2024
Subjects: subject: Space Science
subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Ecology
subject: Biological Sciences not elsewhere classified
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Virology

description: Additional file 1: Table S1. Ce6 loading capacity and encapsulation efficiency of the CGP. Fig. S1. 1H nuclear magnetic resonance spectra of G-PEG-PCL. Fig. S2. The stability of CGP during 14 days. Fig. S3. Ultraviolet-visible absorption spectra of free Ce6, CPP, and CGP. Fig. S4. Fluorescence emission spectra of free Ce6, CP, and CGP. Fig. S5. Total ROS generation profiles of different groups over various durations. Data are presented as mean ± SEM, n = 3, **** p ≤ 0.0001. Comparison between CGP+Laser versus other groups. Fig. S6. Representative images of plate samples of Enterococcus faecalis after various treatments. Fig. S7. bacterial viability of Enterococcus faecalis after various treatments. Fig. S8. HE staining of heart, lung, liver, spleen, and kidney in healthy group and CGP+Laser treated AP group.
Horse: Towards an SDN traffic dynamics simulator for large scale networks
Creators: name: Fernandes, EL
name: Antichi, G
name: Castro, I
name: Uhlig, S
Publisher: name: ACM
Year: 2016
Subjects: Software Defined Networking
simulation

description: © 2016 Copyright held by the owner/author(s). The Software Defined Networking (SDN) paradigm can be successfully applied to the inter-domain ecosystem to empower network fabrics with finer grained policies and traffic engineering capabilities. However, introducing SDN at the inter-domain level might also lead to misconfigurations with potential to negatively impact on the Internet. Simulators are a popular approach to verify network behaviour and test applications before going into production. In the case of SDN, the available options do not scale for large scale networks nor high traffic loads. In this paper we propose a new simulator to foster SDN research and improve our understanding on the impact of the new use cases over the traffic flow. A simulation tool capable of efficiently reproducing large scale networks, high traffic loads, and policies, by abstracting the interactions between switches and controllers of the SDN network.
Python Fuzzing for Trustworthy Machine Learning Frameworks
Creators: name: Yegorov, Ilya
name: Kobrin, Eli
name: Parygina, Darya
name: Vishnyakov, Alexey
name: Fedotov, Andrey
Publisher: name: arXiv
Year: 2024
Subjects: subject: Cryptography and Security (cs.CR)
subject: Artificial Intelligence (cs.AI)
subject: Software Engineering (cs.SE)
subject: FOS: Computer and information sciences

description: Ensuring the security and reliability of machine learning frameworks is crucial for building trustworthy AI-based systems. Fuzzing, a popular technique in secure software development lifecycle (SSDLC), can be used to develop secure and robust software. Popular machine learning frameworks such as PyTorch and TensorFlow are complex and written in multiple programming languages including C/C++ and Python. We propose a dynamic analysis pipeline for Python projects using the Sydr-Fuzz toolset. Our pipeline includes fuzzing, corpus minimization, crash triaging, and coverage collection. Crash triaging and severity estimation are important steps to ensure that the most critical vulnerabilities are addressed promptly. Furthermore, the proposed pipeline is integrated in GitLab CI. To identify the most vulnerable parts of the machine learning frameworks, we analyze their potential attack surfaces and develop fuzz targets for PyTorch, TensorFlow, and related projects such as h5py. Applying our dynamic analysis pipeline to these targets, we were able to discover 3 new bugs and propose fixes for them.
Polypedilum dengae Zhang, Song, Qi & Wang, 2016, sp. n.
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum dengae

description: dengae sp. n.
Type locality. China, Xizang Autonomous region, Nyalam County, Zham Town.
Distribution. OR: China (Xizang Autonomous region).
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 43, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Additional file 1 of Strengthening event-based surveillance (EBS): a case study from Afghanistan
Creators: name: Tahoun, Mohamed Mostafa
name: Sahak, Mohammad Nadir
name: Habibi, Muzhgan
name: Ahadi, Mohamad Jamaluddin
name: Rasoly, Bahara
name: Shivji, Sabrina
name: Aboushady, Ahmed Taha
name: Nabeth, Pierre
name: Sadek, Mahmoud
name: Abouzeid, Alaa
Publisher: name: figshare
Year: 2024
Subjects: subject: Medicine
subject: Neuroscience
subject: Pharmacology
subject: Biotechnology
subject: Environmental Sciences not elsewhere classified
subject: Information Systems not elsewhere classified
subject: Science Policy
subject: Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Supplementary Material 1.
Additional file 6: of Seasonality in malaria transmission: implications for case-management with long-acting artemisinin combination therapy in sub-Saharan Africa
Creators: name: Cairns, Matthew
name: Walker, Patrick
name: Okell, Lucy
name: Griffin, Jamie
name: Garske, Tini
name: Kwaku Asante
name: Owusu-Agyei, Seth
name: Diadier Diallo
name: Alassane Dicko
name: Badara Cisse
name: Greenwood, Brian
name: Chandramohan, Daniel
name: Ghani, Azra
name: Milligan, Paul
Publisher: name: Figshare
Year: 2015
Subjects: subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified

description: Markham Seasonality Polygons for the first admin units representing 10Â % intervals of Markham index. Graphical representation of the Markham Seasonality Index for the sites representing 10Â % intervals of the Markham Seasonality Index.
Additional file 1: of The impact of routine surveillance screening with magnetic resonance imaging (MRI) to detect tumour recurrence in children with central nervous system (CNS) tumours: protocol for a systematic review and meta-analysis
Creators: name: Main, Caroline
name: Stevens, Simon
name: Bailey, Simon
name: Phillips, Robert
name: Pizer, Barry
name: Wheatley, Keith
name: Kearns, Pamela
name: English, Martin
name: Wilne, Sophie
name: Wilson, Jayne
Publisher: name: Figshare
Year: 2016
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Cell Biology
subject: Neuroscience
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy

description: PRISMA-P completed checklist for protocol: the impact of routine surveillance screening with magnetic resonance imaging (MRI) to detect tumour recurrence in children with central nervous system (CNS) tumours. (DOCX 17 kb)
DiffH2O: Diffusion-Based Synthesis of Hand-Object Interactions from Textual Descriptions
Creators: name: Christen, Sammy
name: Hampali, Shreyas
name: Sener, Fadime
name: Remelli, Edoardo
name: Hodan, Tomas
name: Sauser, Eric
name: Ma, Shugao
name: Tekin, Bugra
Publisher: name: arXiv
Year: 2024
Subjects: subject: Computer Vision and Pattern Recognition (cs.CV)
subject: Artificial Intelligence (cs.AI)
subject: Graphics (cs.GR)
subject: Machine Learning (cs.LG)
subject: FOS: Computer and information sciences

description: Generating natural hand-object interactions in 3D is challenging as the resulting hand and object motions are expected to be physically plausible and semantically meaningful. Furthermore, generalization to unseen objects is hindered by the limited scale of available hand-object interaction datasets. In this paper, we propose a novel method, dubbed DiffH2O, which can synthesize realistic, one or two-handed object interactions from provided text prompts and geometry of the object. The method introduces three techniques that enable effective learning from limited data. First, we decompose the task into a grasping stage and an text-based manipulation stage and use separate diffusion models for each. In the grasping stage, the model only generates hand motions, whereas in the manipulation phase both hand and object poses are synthesized. Second, we propose a compact representation that tightly couples hand and object poses and helps in generating realistic hand-object interactions. Third, we propose two different guidance schemes to allow more control of the generated motions: grasp guidance and detailed textual guidance. Grasp guidance takes a single target grasping pose and guides the diffusion model to reach this grasp at the end of the grasping stage, which provides control over the grasping pose. Given a grasping motion from this stage, multiple different actions can be prompted in the manipulation phase. For the textual guidance, we contribute comprehensive text descriptions to the GRAB dataset and show that they enable our method to have more fine-grained control over hand-object interactions. Our quantitative and qualitative evaluation demonstrates that the proposed method outperforms baseline methods and leads to natural hand-object motions.
description: Project Page: https://diffh2o.github.io/
Polypedilum digitifer Townes 1945
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum digitifer

description: digitifer Townes, 1945: The American Midland Naturalist, 34: 45 (Polypedilum (Tripodura).
Type locality. James River at Mitche, South Dakota.
Distribution. NE: USA (Arkansas, California, Florida, Illinois, Louisiana, Maryland, Michigan, Missouri, New York, Texas, Oklahoma, Saskatchewan, Tennessee).
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 43, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Hesium Ribaut 1942
Creators: name: Borodin, Oleg
name: Borodina, Olga
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Cicadellidae
Hesium

description: Hesium Ribaut, 1942
  Hesium domino (Reuter, 1880) –  [Nast, 1972; Vilbaste, 1973; Vilbaste, 1974; Ossiannilsson, 1983; Varzinska, 1983; Nast, 1987; Spuris, 1996b; Ануфриев, Кириллова, 1998; Söderman, Gillerfors, Endrestol, 2009]; = Hesium biguttatum (Fall. 1806) [Velce, 1968].
description: Published as part of Borodin, Oleg & Borodina, Olga, 2021, Fulgoromorpha & Cicadomorpha (Hemiptera) Of Latvia. Current State Of Study, pp. 155-184 in Acta Biologica Universitatis Daugavpiliensis 21 (2) on page 174, DOI: 10.5281/zenodo.12645231
Additional file 2: of Seasonality in malaria transmission: implications for case-management with long-acting artemisinin combination therapy in sub-Saharan Africa
Creators: name: Cairns, Matthew
name: Walker, Patrick
name: Okell, Lucy
name: Griffin, Jamie
name: Garske, Tini
name: Kwaku Asante
name: Owusu-Agyei, Seth
name: Diadier Diallo
name: Alassane Dicko
name: Badara Cisse
name: Greenwood, Brian
name: Chandramohan, Daniel
name: Ghani, Azra
name: Milligan, Paul
Publisher: name: Figshare
Year: 2015
Subjects: subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Science Policy

description: Details of the Markham Seasonality Index. Explanation of how the Markham Seasonality Index is calculated, and illustration of two example scenarios.
Additional file 3: Table S2. of Using a practical molecular capsular serotype prediction strategy to investigate Streptococcus pneumoniae serotype distribution and antimicrobial resistance in Chinese local hospitalized children
Creators: name: Jin, Ping
name: Lijuan Wu
name: Oftadeh, Shahin
name: Kudinha, Timothy
name: Fanrong Kong
name: Qiyi Zeng
Publisher: name: Figshare
Year: 2016
Subjects: subject: Microbiology
subject: FOS: Biological sciences
subject: Genetics
subject: Molecular Biology
subject: Biotechnology
subject: 39999 Chemical Sciences not elsewhere classified
subject: FOS: Chemical sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Developmental Biology
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Comprehensive cpsB sequetyping database based on GenBank sequences (until Jan 1, 2015). (DOCX 47Â kb)
Nonlinear trend of COVID-19 infection time series
Creators: name: Ishiyama, Fumihiko
Publisher: name: arXiv
Year: 2024
Subjects: subject: Physics and Society (physics.soc-ph)
subject: Numerical Analysis (math.NA)
subject: Populations and Evolution (q-bio.PE)
subject: FOS: Physical sciences
subject: FOS: Mathematics
subject: FOS: Biological sciences

description: We have developed a nonlinear method of time series analysis that allows us to obtain multiple nonlinear trends without harmonics from a given set of numerical data. We propose to apply the method to recognize the ongoing status of COVID-19 infection with an analytical equation for nonlinear trends. We found that there is only a single nonlinear trend, and this result justifies the use of a week-based infection growth rate. In addition, the fit with the obtained analytical equation for the nonlinear trend holds for a duration of more than three months for the Delta variant infection time series. The fitting also visualizes the transition to the Omicron variant.
description: 11 pages, 7 figures
Additional file 1: Figure S1. of Shape, colour plasticity, and habitat use indicate morph-specific camouflage strategies in a marine shrimp
Creators: name: Duarte, Rafael
name: Stevens, Martin
name: Flores, Augusto
Publisher: name: Figshare
Year: 2016
Subjects: subject: Biochemistry
subject: Space Science
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Sociology
subject: FOS: Sociology
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Developmental Biology
subject: Inorganic Chemistry
subject: FOS: Chemical sciences

description: Images extracted from video footage showing the experimental set up used in habitat fidelity and mobility trials (see details in the main text). Homogeneous (H) and striped translucent (ST) morphs of the shrimp Hippolyte obliquimanus were more easily identified in dorsal view, when thin longitudinal stripes of ST shrimps stood clearly out from the bottom of aquaria, contrasting to the solid coloration typical of H shrimp. A lateral view of an ST individual (as the lowermost shrimp in the lower image), showing translucent areas over the abdomen and carapace, could however suffice for morph identification. (PDF 489 kb)
Integrating SystemC-AMS Power Modeling with a RISC-V ISS for Virtual Prototyping of Battery-operated Embedded Devices
Creators: name: Hamdi, Mohamed Amine
name: Pollo, Giovanni
name: Risso, Matteo
name: Haugou, Germain
name: Burrello, Alessio
name: Macii, Enrico
name: Poncino, Massimo
name: Vinco, Sara
name: Pagliari, Daniele Jahier
Publisher: name: arXiv
Year: 2024
Subjects: subject: Systems and Control (eess.SY)
subject: Hardware Architecture (cs.AR)
subject: FOS: Electrical engineering, electronic engineering, information engineering
subject: FOS: Computer and information sciences
subject: B.8.2; B.6.3

description: RISC-V cores have gained a lot of popularity over the last few years. However, being quite a recent and novel technology, there is still a gap in the availability of comprehensive simulation frameworks for RISC-V that cover both the functional and extra-functional aspects. This gap hinders progress in the field, as fast yet accurate system-level simulation is crucial for Design Space Exploration (DSE).
 This work presents an open-source framework designed to tackle this challenge, integrating functional RISC-V simulation (achieved with GVSoC) with SystemC-AMS (used to model extra-functional aspects, in detail power storage and distribution). The combination of GVSoC and SystemC-AMS in a single simulation framework allows to perform a DSE that is dependent on the mutual impact between functional and extra-functional aspects. In our experiments, we validate the framework's effectiveness by creating a virtual prototype of a compact, battery-powered embedded system.
description: 4 pages, 4 figures, to be published in Computing Frontiers Workshops and Special Sessions (CF '24 Companion), May 7--9, 2024, Ischia, Italy
Additional file 11: of Seasonality in malaria transmission: implications for case-management with long-acting artemisinin combination therapy in sub-Saharan Africa
Creators: name: Cairns, Matthew
name: Walker, Patrick
name: Okell, Lucy
name: Griffin, Jamie
name: Garske, Tini
name: Kwaku Asante
name: Owusu-Agyei, Seth
name: Diadier Diallo
name: Alassane Dicko
name: Badara Cisse
name: Greenwood, Brian
name: Chandramohan, Daniel
name: Ghani, Azra
name: Milligan, Paul
Publisher: name: Figshare
Year: 2015
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: FOS: Biological sciences
subject: Cancer
subject: Science Policy
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Total malaria burden per 1,000 children in different intervals after the preceding episode. Burden of repeat malaria per 1,000 children occurring in different intervals following the previous episode, according to the Markham seasonality index (MSI). Scenarios shown for 20, 40 and 60Â % prevalence.
Spin foam amplitude of the black-to-white hole transition
Creators: name: Han, Muxin
name: Qu, Dongxue
name: Zhang, Cong
Publisher: name: arXiv
Year: 2024
Subjects: subject: General Relativity and Quantum Cosmology (gr-qc)
subject: High Energy Physics - Theory (hep-th)
subject: FOS: Physical sciences

description: It has been conjectured that quantum gravity effects may cause the black-to-white hole transition due to quantum tunneling. The transition amplitude of this process is explored within the framework of the spin foam model on a 2-complex containing 56 vertices. We develop a systematic way to construct the bulk triangulation from the boundary triangulation to obtain the 2-complex. By using Thiemann's complexifier coherent state as the boundary state to resemble the semiclassical geometry, we introduce a procedure to calculate the parameters labeling the coherent state from the continuous curved geometry. Considering that triad fields of different orientations, i.e., $e_i^a$ and $-e_i^a$, give the same intrinsic geometry of the boundary, we creatively adopt the boundary state as a superposition of the coherent states associated with both orientations. We employ the method of complex critical point to numerically compute the transition amplitude. Despite the numerical results, it is interestingly found that the transition amplitude is dominated by the terms allowing the change in orientation. This suggests that the black-to-white hole transition should be accompanied by quantum tunneling process of a change in orientation.
description: 19+17 Pages, reversed based on the published version
Towards Transcranial 3D Ultrasound Localization Microscopy of the Nonhuman Primate Brain
Creators: name: Xing, Paul
name: Perrot, Vincent
name: Dominguez-Vargas, Adan Ulises
name: Quessy, Stephan
name: Dancause, Numa
name: Provost, Jean
Publisher: name: arXiv
Year: 2024
Subjects: subject: Image and Video Processing (eess.IV)
subject: Signal Processing (eess.SP)
subject: FOS: Electrical engineering, electronic engineering, information engineering

description: Hemodynamic changes occur in stroke and neurodegenerative diseases. Developing imaging techniques allowing the in vivo visualization and quantification of cerebral blood flow would help better understand the underlying mechanism of those cerebrovascular diseases. 3D ultrasound localization microscopy (ULM) is a novel technology that can map the microvasculature of the brain at large depth and has been mainly used until now in rodents. Here, we demonstrated the feasibility of 3D ULM of the nonhuman primate (NHP) brain with a single 256-channels programmable ultrasound scanner. We achieved a highly resolved vascular map of the macaque brain at large depth in presence of craniotomy and durectomy using an 8-MHz multiplexed matrix probe. We were able to distinguish vessels as small as 26.9 μm. We also demonstrated that transcranial imaging of the macaque brain at similar depth was feasible using a 3-MHz probe and achieved a resolution of 60.4 μm. This work paves the way to clinical application of 3D ULM.
Polypedilum dybasi Tokunaga 1964
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum dybasi

description: dybasi (Tokunaga, 1964): Insects of Micronesia, 587 (Polypedilum (Polypedilum )).
Type locality. Palau (Ulimang, Babelthuap I.).
Distribution. OC: Caroline Is. (Palau, Yap, Ponape, Kusaie).
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 43, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Mind the Gap: A Comparison of Software Packet Generators
Creators: name: Emmerich, P
name: Gallenmüller, S
name: Antichi, G
name: Moore, AW
name: Carle, G
Publisher: name: IEEE
Year: 2017
Subjects: NetFPGA
Packet Processing Frameworks
benchmarking

description: Network research relies on packet generators to assess performance and correctness of new ideas. Software-based generators in particular are widely used by academic researchers because of their flexibility, affordability, and open-source nature. The rise of new frameworks for fast IO on commodity hardware is making them even more attractive. Longstanding performance differences of software generation versus hardware in terms of throughput are no longer as big of a concern as they used to be few years ago. This paper investigates the properties of several high-performance software packet generators and the implications on their precision when a given traffic pattern needs to be generated. We believe that the evaluation strategy presented in this paper helps understanding the actual limitations in high-performance software packet generation, thus helping the research community to build better tools.
Additional file 1 of Modified fructan accumulation through overexpression of wheat fructan biosynthesis pathway fusion genes Ta1SST:Ta6SFT
Creators: name: Chen, Tong
name: Hayes, Matthew
name: Liu, Zhiqian
name: Isenegger, Daniel
name: Mason, John
name: Spangenberg, German
Publisher: name: figshare
Year: 2024
Subjects: subject: Genetics
subject: FOS: Biological sciences
subject: Plant Biology

description: Supplementary Material 1.
Magneto-Induced Topological Phase Transition in Inverted InAs/GaSb Bilayers
Creators: name: Han, Zhongdong
name: Li, Tingxin
name: Zhang, Long
name: Du, Rui-Rui
Publisher: name: arXiv
Year: 2024
Subjects: subject: Mesoscale and Nanoscale Physics (cond-mat.mes-hall)
subject: FOS: Physical sciences

description: We report a magneto-induced topological phase transition in inverted InAs/GaSb bilayers from a quantum spin Hall insulator to a normal insulator. We utilize a dual-gated Corbino device in which the degree of band inversion, or equivalently the electron and hole densities, can be continuously tuned. We observe a topological phase transition around the magnetic field where a band crossing occurs, that is accompanied by a bulk-gap closure characterized by a bulk conductance peak (BCP). In another set of experiments, we study the transition under a tilted magnetic field (tilt angle $θ$). We observe the characteristic magneto-conductance around BCP as a function of $θ$, which dramatically depends on the density of the bilayers. In a relatively deep-inversion (hence a higher density) regime, where the electron-hole hybridization dominates the excitonic interaction, the BCP grows with $θ$. On the contrary, in a shallowly-inverted (a lower density) regime, where the excitonic interaction dominates the hybridization, the BCP is suppressed indicating a smooth crossover without a gap closure. This suggests the existence of a low-density, correlated insulator with spontaneous symmetry breaking near the critical point. Our highly controllable electron-hole system offers an ideal platform to study interacting topological states as proposed by recent theories.
description: 15+15 pages, 4+9 figures
Additional file 1: Table S1. of Using a practical molecular capsular serotype prediction strategy to investigate Streptococcus pneumoniae serotype distribution and antimicrobial resistance in Chinese local hospitalized children
Creators: name: Jin, Ping
name: Lijuan Wu
name: Oftadeh, Shahin
name: Kudinha, Timothy
name: Fanrong Kong
name: Qiyi Zeng
Publisher: name: Figshare
Year: 2016
Subjects: subject: Medicine
subject: Microbiology
subject: FOS: Biological sciences
subject: Molecular Biology
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: 19999 Mathematical Sciences not elsewhere classified
subject: FOS: Mathematics
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Clinical information of our 193 isolates. (DOC 318Â kb)
Polypedilum elongatum Albu 1980
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum elongatum

description: elongatum Albu, 1980: Fauna Republicii Socialiste Romania Insecta, 11: 209 (Polypedilum).
Type locality. Romania (la Sinaia (Jud. Prahova) i Gura Zlata).
Distribution. PA: Germany, Romania, France, Greece.
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 43, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Additional file 7: of Seasonality in malaria transmission: implications for case-management with long-acting artemisinin combination therapy in sub-Saharan Africa
Creators: name: Cairns, Matthew
name: Walker, Patrick
name: Okell, Lucy
name: Griffin, Jamie
name: Garske, Tini
name: Kwaku Asante
name: Owusu-Agyei, Seth
name: Diadier Diallo
name: Alassane Dicko
name: Badara Cisse
name: Greenwood, Brian
name: Chandramohan, Daniel
name: Ghani, Azra
name: Milligan, Paul
Publisher: name: Figshare
Year: 2015
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Neuroscience
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: Computational Biology

description: Correlation between model seasonality in larval carrying capacity and predicted seasonality in clinical malaria. Correlation between Markham seasonality index calculated for the larval carrying capacity function (as an input into the model determining seasonality) and MSI for seasonality in clinical malaria at different levels of prevalence.
Athysanus Burmeister 1838
Creators: name: Borodin, Oleg
name: Borodina, Olga
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Cicadellidae
Athysanus

description: Athysanus Burmeister, 1838
  Athysanus argentarius Metcalf, 1955 –  [Данка, 1964; Nast, 1972; Ossiannilsson, 1983; Varzinska, 1983; Nast, 1987; Spuris, 1996b; Ануфриев, Кириллова, 1998; Söderman, Gillerfors, Endrestol, 2009; Vilbaste, 1974]; = Athysanus argentatus (F. 1794) [Velce, 1968; Danka, 1973].  Athysanus quadrum Boheman, 1845 –  [Velce, 1968; Nast, 1972; Velce, 1972; Danka, 1973; Vilbaste, 1973; Vilbaste, 1974; Ossiannilsson, 1983; Varzinska, 1983; Nast, 1987; Spuris, 1996b; Ануфриев, Кириллова, 1998; Söderman, Gillerfors, Endrestol, 2009].
description: Published as part of Borodin, Oleg & Borodina, Olga, 2021, Fulgoromorpha & Cicadomorpha (Hemiptera) Of Latvia. Current State Of Study, pp. 155-184 in Acta Biologica Universitatis Daugavpiliensis 21 (2) on page 174, DOI: 10.5281/zenodo.12645231
Inferring nonlinear dynamics of cell migration
Creators: name: Zadeh, Pedrom
name: Camley, Brian A.
Publisher: name: arXiv
Year: 2024
Subjects: subject: Cell Behavior (q-bio.CB)
subject: Soft Condensed Matter (cond-mat.soft)
subject: Biological Physics (physics.bio-ph)
subject: FOS: Biological sciences
subject: FOS: Physical sciences

description: The motility of eukaryotic cells is strongly influenced by their environment, with confined cells often developing qualitatively different motility patterns from those migrating on simple two-dimensional substrates. Recent experiments, coupled with data-driven methods to extract a cell's equation of motion, showed that cancerous MDA-MB-231 cells persistently hop in a limit cycle when placed on two-state adhesive micropatterns (two large squares connected by a narrow bridge), while they remain stationary on average in rectangular confinements. In contrast, healthy MCF10A cells migrating on the two-state micropattern are bistable, i.e., they settle into either basin on average with only noise-induced hops between the two states. We can capture all these behaviors with a single computational phase field model of a crawling cell, under the assumption that contact with non-adhesive substrate inhibits the cell front. Our model predicts that larger and softer cells are more likely to persistently hop, while smaller and stiffer cells are more likely to be bistable. Other key factors controlling cell migration are the frequency of protrusions and their magnitude of noise. Our results show that relatively simple assumptions about how cells sense their geometry can explain a wide variety of different cell behaviors, and show the power of data-driven approaches to characterize both experiment and simulation.
Additional file 1: of Seasonality in malaria transmission: implications for case-management with long-acting artemisinin combination therapy in sub-Saharan Africa
Creators: name: Cairns, Matthew
name: Walker, Patrick
name: Okell, Lucy
name: Griffin, Jamie
name: Garske, Tini
name: Kwaku Asante
name: Owusu-Agyei, Seth
name: Diadier Diallo
name: Alassane Dicko
name: Badara Cisse
name: Greenwood, Brian
name: Chandramohan, Daniel
name: Ghani, Azra
name: Milligan, Paul
Publisher: name: Figshare
Year: 2015
Subjects: subject: 29999 Physical Sciences not elsewhere classified
subject: FOS: Physical sciences
subject: Medicine
subject: Biotechnology
subject: 59999 Environmental Sciences not elsewhere classified
subject: FOS: Earth and related environmental sciences
subject: Ecology
subject: FOS: Biological sciences
subject: 69999 Biological Sciences not elsewhere classified
subject: Cancer
subject: 110309 Infectious Diseases
subject: FOS: Health sciences
subject: Computational Biology

description: Location of the study sites, and length of season according to Mapping Malaria Risk in Africa (MARA). Location of the six cohort/studies in West Africa, and an indication of the length of the malaria transmission season according to the Mapping Malaria Risk in Africa (MARA) project.
Overcoming the fundamental limit of quantum transduction via intraband entanglement
Creators: name: Shi, Haowei
name: Zhuang, Quntao
Publisher: name: arXiv
Year: 2024
Subjects: subject: Quantum Physics (quant-ph)
subject: Applied Physics (physics.app-ph)
subject: Optics (physics.optics)
subject: FOS: Physical sciences

description: A quantum transducer converts an input signal to an output probe at a distant frequency band while maintaining the quantum information with high fidelity, which is crucial for quantum networking and distributed quantum sensing and computing. In terms of microwave-optical quantum transduction, the state-of-the-art quantum transducers suffer low transduction efficiency from weak nonlinear coupling, wherein increasing pump power to enhance efficiency inevitably leads to thermal noise from heating. Moreover, we reveal that the efficiency-bandwidth product of a cavity electro-optical or electro-optomechanical transducer is fundamentally limited by pump power and nonlinear coupling coefficient, irrespective of cavity engineering efforts. To overcome this fundamental limit, we propose to noiselessly boost the transduction efficiency by consuming intraband entanglement (e.g., microwave-microwave or optical-optical entanglement in the case of microwave-optical transduction). Via a squeezer-coupler-antisqueezer sandwich structure, the protocol enhances the transduction efficiency to unity in the ideal lossless case, given an arbitrarily weak pump and nonlinear coupling. In practical cavity systems, our entanglement-assisted protocol surpasses the non-assisted fundamental limit of the efficiency-bandwidth product and reduces the threshold cooperativity for positive quantum capacity by a factor proportional to two-mode squeezing gain. Given a fixed cooperativity, our approach increases the broadband quantum capacity by orders of magnitude. The entanglement-assisted advantage is robust to ancilla loss and cavity detuning.
description: 8+12 pages, 3+4 figures
Polypedilum epomis Sublette & Sasa 1994
Creators: name: Zhang, Ruilei
name: Song, Chao
name: Qi, Xin
name: Wang, Xinhua
Publisher: name: Zenodo
Year: 2016
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Diptera
Chironomidae
Polypedilum
Polypedilum epomis

description: epomis Sublette & Sasa, 1994: Spixiana (Supplement), 20: 46 (Polypedilum (Tripodura )).
Type locality. Guatemala (Rincon).
Distribution. NT: Costa Rica, Guatemala.
description: Published as part of Zhang, Ruilei, Song, Chao, Qi, Xin & Wang, Xinhua, 2016, Taxonomic review on the subgenus Tripodura Townes (Diptera: Chironomidae: Polypedilum) from China with eleven new species and a supplementary world checklist, pp. 1-53 in Zootaxa 4136 (1) on page 43, DOI: 10.11646/zootaxa.4136.1.1, http://zenodo.org/record/399782
Euscelis distinguendus
Creators: name: Borodin, Oleg
name: Borodina, Olga
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Cicadellidae
Euscelis
Euscelis distinguendus

description: Euscelis distinguendus (Kirschbaum, 1858)
 – [Danka, 1973; Vilbaste, 1974; Varzinska, 1983; Nast, 1987; Spuris, 1996b; Ануфриев, Кириллова, 1998; Söderman, Gillerfors, Endrestol, 2009; Petrova, Jankevica, Samsone, 2013].
  Euscelis incisus (Kirschbaum, 1858) –  [Nast, 1972; Vilbaste, 1974; Nast, 1987; Spuris, 1996b].  Euscelis venosus (Kirschbaum, 1868) –  [Vilbaste, 1974; Nast, 1987; Spuris, 1996b; Ануфриев, Кириллова, 1998; Söderman, Gillerfors, Endrestol, 2009].
description: Published as part of Borodin, Oleg & Borodina, Olga, 2021, Fulgoromorpha & Cicadomorpha (Hemiptera) Of Latvia. Current State Of Study, pp. 155-184 in Acta Biologica Universitatis Daugavpiliensis 21 (2) on page 175, DOI: 10.5281/zenodo.12645231
Mileewa Distant 1908
Creators: name: Yu, Xiao-Fei
name: He, Hong-Li
name: Yang, Mao-Fa
Publisher: name: Zenodo
Year: 2021
Subjects: Biodiversity
Taxonomy
Animalia
Arthropoda
Insecta
Hemiptera
Cicadellidae
Mileewa

description: Genus Mileewa Distant, 1908
Mileewa Distant, 1908, The Fauna of British India including Ceylon and Burma. Rhynchota IV Homoptera and Appendix (Pt.), 4: 238.
Bolinlila Distant, 1910, Insecta Transvaaliensia, a contribution to knowledge of the entomology of South Africa, 10: 234.
Tylozygoides Matsumura, 1912, Annotationes Zoologicae Japonenses, 8: 42.
Faenius Distant, 1918, The Fauna of British India including Ceylon and Burma. Rhynchota VII Homoptera and Appendix (Pt.), 7: 14. Augulus Distant, 1918, The Fauna of British India including Ceylon and Burma. Rhynchota VII Homoptera and Appendix (Pt.), 7: 98.
Formotettigella Ishihara, 1965, Special Bulletin of Lepidopterological Society of Japan, 1: 216.
Dignosis. Small, slender, usually dark brown or black species, forewing often with transparent spots. Crown with ocelli situated medially, anterior margin rounded or produced. Frontoclypeus swollen. Pronotum broad and short, anterior margin arched, posterior margin concave or straight, lateral margin oblique straight. Forewing apical margin oblique and straight. Hindleg femoral setal formula 2:1:1. Male pygofer with ventral pygofer process, ventral margin bearing slender setae, apical margin occasionally with thick setae. Subgenital plates slender, with thick setae row, slender and short microsetae sometimes present. Connective Y-shaped, rarely V-shaped, triangular or trapezoid shaped. Style elongated, apex slender or sickle shaped. Aedeagus variously shaped.
description: Published as part of Yu, Xiao-Fei, He, Hong-Li & Yang, Mao-Fa, 2021, Three new species of Mileewa (Hemiptera: Cicadellidae: Mileewinae) from Tibet China, pp. 435-443 in Zootaxa 4933 (3) on pages 435-436, DOI: 10.11646/zootaxa.4933.3.9, http://zenodo.org/record/4555123
Abelian Chern-Simons vortices in the presence of magnetic impurities
Creators: name: Bazeia, Dionisio
name: Campos, João G. F.
name: Mohammadi, Azadeh
Publisher: name: arXiv
Year: 2024
Subjects: subject: High Energy Physics - Theory (hep-th)
subject: Pattern Formation and Solitons (nlin.PS)
subject: FOS: Physical sciences

description: This work deals with Abelian Chern-Simons vortices interacting with magnetic impurities. We compute static solutions with winding numbers zero and one. Then, we develop a numerical algorithm to simulate their collisions. Collisions between a vortex with winding number two and a magnetic impurity are also performed. All scattering results are interpreted in terms of the moduli space approximation and compared with the Abelian Maxwell-Higgs model.